Query 017664
Match_columns 368
No_of_seqs 236 out of 2646
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 02:59:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017664.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017664hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eqs_A Coenzyme A disulfide re 100.0 2.7E-46 9.1E-51 353.7 24.5 337 17-366 1-386 (437)
2 4g6h_A Rotenone-insensitive NA 100.0 1.1E-44 3.9E-49 347.3 27.7 320 11-336 37-450 (502)
3 2wpf_A Trypanothione reductase 100.0 3.4E-45 1.2E-49 351.4 17.4 345 12-366 3-433 (495)
4 1ges_A Glutathione reductase; 100.0 3.1E-45 1E-49 348.2 16.8 340 13-366 1-408 (450)
5 2r9z_A Glutathione amide reduc 100.0 2.1E-44 7.3E-49 343.4 18.5 340 13-365 1-405 (463)
6 3urh_A Dihydrolipoyl dehydroge 100.0 9.2E-45 3.2E-49 348.8 15.3 343 12-366 21-439 (491)
7 3ic9_A Dihydrolipoamide dehydr 100.0 1.3E-44 4.4E-49 347.4 15.6 341 16-366 8-421 (492)
8 3oc4_A Oxidoreductase, pyridin 100.0 8.2E-44 2.8E-48 338.7 20.3 336 17-365 3-387 (452)
9 4dna_A Probable glutathione re 100.0 3.8E-44 1.3E-48 342.1 18.0 338 15-366 4-408 (463)
10 2hqm_A GR, grase, glutathione 100.0 5.4E-44 1.8E-48 342.2 18.6 343 13-366 8-429 (479)
11 3kd9_A Coenzyme A disulfide re 100.0 1.9E-43 6.5E-48 336.0 22.3 338 15-365 2-390 (449)
12 1fec_A Trypanothione reductase 100.0 6.1E-44 2.1E-48 342.5 18.9 342 15-366 2-429 (490)
13 3iwa_A FAD-dependent pyridine 100.0 7.8E-44 2.7E-48 340.8 18.9 340 16-365 3-404 (472)
14 1mo9_A ORF3; nucleotide bindin 100.0 9.5E-44 3.3E-48 343.8 18.1 341 11-365 38-469 (523)
15 1ojt_A Surface protein; redox- 100.0 5.5E-44 1.9E-48 342.5 16.2 341 13-366 3-425 (482)
16 3l8k_A Dihydrolipoyl dehydroge 100.0 4.5E-44 1.5E-48 341.7 15.2 339 14-366 2-412 (466)
17 2eq6_A Pyruvate dehydrogenase 100.0 1E-43 3.5E-48 339.0 16.9 337 16-365 6-408 (464)
18 3o0h_A Glutathione reductase; 100.0 4.6E-44 1.6E-48 343.3 13.6 342 16-366 26-428 (484)
19 4b1b_A TRXR, thioredoxin reduc 100.0 1.3E-43 4.6E-48 340.9 16.6 339 16-366 42-479 (542)
20 3lad_A Dihydrolipoamide dehydr 100.0 1.6E-43 5.3E-48 339.2 16.6 344 15-366 2-419 (476)
21 2qae_A Lipoamide, dihydrolipoy 100.0 1.7E-43 5.7E-48 338.2 16.5 337 16-365 2-415 (468)
22 3dk9_A Grase, GR, glutathione 100.0 9.7E-44 3.3E-48 340.7 14.7 344 13-366 17-436 (478)
23 1onf_A GR, grase, glutathione 100.0 9.4E-44 3.2E-48 342.1 14.3 336 16-366 2-454 (500)
24 2bc0_A NADH oxidase; flavoprot 100.0 6E-43 2E-47 335.9 19.5 337 16-365 35-437 (490)
25 1xhc_A NADH oxidase /nitrite r 100.0 1.4E-42 4.9E-47 321.0 21.1 319 16-365 8-348 (367)
26 3ics_A Coenzyme A-disulfide re 100.0 1E-42 3.5E-47 341.7 20.9 344 12-365 32-429 (588)
27 1zmd_A Dihydrolipoyl dehydroge 100.0 3.6E-43 1.2E-47 336.4 16.8 336 15-365 5-420 (474)
28 1zk7_A HGII, reductase, mercur 100.0 5.4E-43 1.8E-47 334.6 17.5 342 13-366 1-410 (467)
29 2cdu_A NADPH oxidase; flavoenz 100.0 1.7E-42 5.8E-47 329.8 19.8 335 17-365 1-392 (452)
30 3qfa_A Thioredoxin reductase 1 100.0 7.1E-43 2.4E-47 337.2 17.4 344 11-366 27-461 (519)
31 1ebd_A E3BD, dihydrolipoamide 100.0 3.8E-43 1.3E-47 334.5 15.4 337 16-366 3-409 (455)
32 3ntd_A FAD-dependent pyridine 100.0 4.5E-42 1.6E-46 336.0 22.7 338 17-365 2-413 (565)
33 1dxl_A Dihydrolipoamide dehydr 100.0 5.2E-43 1.8E-47 335.1 14.9 339 14-365 4-417 (470)
34 2a8x_A Dihydrolipoyl dehydroge 100.0 6.8E-43 2.3E-47 333.6 15.4 335 16-365 3-411 (464)
35 3dgh_A TRXR-1, thioredoxin red 100.0 4.5E-42 1.5E-46 329.4 19.5 340 14-366 7-433 (483)
36 1xdi_A RV3303C-LPDA; reductase 100.0 1.2E-42 4E-47 334.7 14.4 337 16-365 2-418 (499)
37 1v59_A Dihydrolipoamide dehydr 100.0 1.6E-42 5.6E-47 332.3 15.2 344 13-365 2-425 (478)
38 3dgz_A Thioredoxin reductase 2 100.0 3.1E-42 1.1E-46 330.9 16.9 339 15-365 5-432 (488)
39 2gqw_A Ferredoxin reductase; f 100.0 7.4E-41 2.5E-45 314.1 23.8 277 14-301 5-307 (408)
40 3cgb_A Pyridine nucleotide-dis 100.0 2.8E-41 9.5E-46 323.5 20.8 337 16-365 36-428 (480)
41 3klj_A NAD(FAD)-dependent dehy 100.0 8.6E-42 3E-46 317.3 16.7 270 13-300 6-292 (385)
42 1lvl_A Dihydrolipoamide dehydr 100.0 5.9E-42 2E-46 326.3 15.4 334 15-365 4-405 (458)
43 3hyw_A Sulfide-quinone reducta 100.0 5E-40 1.7E-44 310.5 28.0 314 17-334 3-360 (430)
44 1nhp_A NADH peroxidase; oxidor 100.0 6.3E-41 2.2E-45 318.5 21.9 335 17-365 1-391 (447)
45 2yqu_A 2-oxoglutarate dehydrog 100.0 7.4E-42 2.5E-46 325.7 15.2 337 16-365 1-402 (455)
46 3ef6_A Toluene 1,2-dioxygenase 100.0 8.3E-41 2.8E-45 314.0 21.5 277 17-300 3-307 (410)
47 2v3a_A Rubredoxin reductase; a 100.0 2.8E-40 9.4E-45 308.1 21.9 334 13-365 1-364 (384)
48 3lxd_A FAD-dependent pyridine 100.0 6.3E-39 2.2E-43 302.0 27.6 280 14-300 7-319 (415)
49 3sx6_A Sulfide-quinone reducta 100.0 1E-39 3.4E-44 309.3 22.0 336 14-358 2-402 (437)
50 3fg2_P Putative rubredoxin red 100.0 2.4E-39 8.3E-44 303.7 24.3 278 16-300 1-308 (404)
51 1q1r_A Putidaredoxin reductase 100.0 8.4E-40 2.9E-44 308.9 20.1 280 14-300 2-317 (431)
52 3h28_A Sulfide-quinone reducta 100.0 4.5E-39 1.5E-43 304.3 23.9 332 16-357 2-389 (430)
53 2x8g_A Thioredoxin glutathione 100.0 8.4E-40 2.9E-44 321.5 16.5 344 14-365 105-539 (598)
54 3vrd_B FCCB subunit, flavocyto 100.0 7.6E-39 2.6E-43 300.2 19.6 289 16-308 2-328 (401)
55 3fbs_A Oxidoreductase; structu 100.0 1.6E-38 5.4E-43 285.7 19.4 277 16-307 2-295 (297)
56 1m6i_A Programmed cell death p 100.0 3.4E-37 1.1E-41 295.7 26.7 288 9-300 4-350 (493)
57 4gcm_A TRXR, thioredoxin reduc 100.0 2.8E-38 9.5E-43 286.5 17.8 275 16-305 6-307 (312)
58 4fk1_A Putative thioredoxin re 100.0 2.9E-38 1E-42 285.3 17.9 279 12-305 2-301 (304)
59 3f8d_A Thioredoxin reductase ( 100.0 9.3E-38 3.2E-42 284.0 21.1 282 14-307 13-320 (323)
60 2q7v_A Thioredoxin reductase; 100.0 7.8E-38 2.7E-42 285.2 19.6 281 13-307 5-315 (325)
61 4a5l_A Thioredoxin reductase; 100.0 1.4E-37 4.6E-42 282.1 21.0 279 13-304 1-312 (314)
62 3cty_A Thioredoxin reductase; 100.0 5.1E-38 1.8E-42 285.6 17.9 288 5-306 5-318 (319)
63 3h8l_A NADH oxidase; membrane 100.0 2.4E-36 8.1E-41 284.0 27.6 294 17-317 2-347 (409)
64 1trb_A Thioredoxin reductase; 100.0 3.9E-37 1.3E-41 279.8 19.7 282 14-307 3-317 (320)
65 3r9u_A Thioredoxin reductase; 100.0 7.6E-37 2.6E-41 277.0 19.9 282 14-306 2-314 (315)
66 2q0l_A TRXR, thioredoxin reduc 100.0 1E-36 3.5E-41 276.0 19.8 279 16-305 1-310 (311)
67 3itj_A Thioredoxin reductase 1 100.0 3.9E-37 1.3E-41 281.7 17.0 283 11-306 17-337 (338)
68 2zbw_A Thioredoxin reductase; 100.0 1.4E-36 4.6E-41 278.1 20.4 286 14-308 3-321 (335)
69 3ab1_A Ferredoxin--NADP reduct 100.0 1.9E-36 6.5E-41 279.9 18.1 289 10-307 8-331 (360)
70 1fl2_A Alkyl hydroperoxide red 100.0 6.5E-36 2.2E-40 270.6 20.6 277 16-307 1-308 (310)
71 2a87_A TRXR, TR, thioredoxin r 100.0 4.4E-36 1.5E-40 274.7 18.2 284 11-306 9-318 (335)
72 3lzw_A Ferredoxin--NADP reduct 100.0 3.3E-36 1.1E-40 274.8 15.0 279 15-307 6-318 (332)
73 1vdc_A NTR, NADPH dependent th 100.0 1E-35 3.5E-40 272.0 15.5 279 15-307 7-326 (333)
74 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.9E-34 1E-38 277.0 16.5 278 14-306 210-518 (521)
75 2vdc_G Glutamate synthase [NAD 100.0 4.9E-35 1.7E-39 277.0 9.9 276 14-307 120-447 (456)
76 3d1c_A Flavin-containing putat 100.0 2.6E-34 8.7E-39 266.4 12.2 293 15-317 3-353 (369)
77 4a9w_A Monooxygenase; baeyer-v 100.0 6.3E-34 2.1E-38 262.2 14.6 279 15-305 2-353 (357)
78 3s5w_A L-ornithine 5-monooxyge 100.0 1.9E-31 6.7E-36 254.5 16.4 285 15-305 29-450 (463)
79 1lqt_A FPRA; NADP+ derivative, 100.0 5.7E-32 2E-36 256.4 9.8 277 15-305 2-388 (456)
80 1gte_A Dihydropyrimidine dehyd 100.0 1.5E-31 5.1E-36 276.1 11.1 272 15-304 186-508 (1025)
81 1cjc_A Protein (adrenodoxin re 100.0 3.5E-31 1.2E-35 251.3 10.2 278 15-306 5-397 (460)
82 3k30_A Histamine dehydrogenase 100.0 9.1E-32 3.1E-36 268.0 6.5 270 12-307 387-678 (690)
83 2xve_A Flavin-containing monoo 100.0 1.6E-29 5.4E-34 240.6 17.2 260 17-300 3-337 (464)
84 1o94_A Tmadh, trimethylamine d 100.0 3.5E-31 1.2E-35 264.8 3.5 272 13-306 386-702 (729)
85 2gag_A Heterotetrameric sarcos 100.0 9.3E-30 3.2E-34 261.1 14.0 269 15-305 127-445 (965)
86 2gv8_A Monooxygenase; FMO, FAD 100.0 2E-29 6.7E-34 239.4 14.8 263 14-300 4-358 (447)
87 1y56_A Hypothetical protein PH 100.0 2.3E-29 7.7E-34 241.4 13.7 247 16-303 108-376 (493)
88 3gwf_A Cyclohexanone monooxyge 99.9 1.1E-27 3.9E-32 231.3 15.7 286 15-306 7-459 (540)
89 1ps9_A 2,4-dienoyl-COA reducta 99.9 7.1E-28 2.4E-32 239.3 12.5 254 14-299 371-671 (671)
90 3uox_A Otemo; baeyer-villiger 99.9 5.2E-26 1.8E-30 219.9 13.8 283 14-305 7-467 (545)
91 1w4x_A Phenylacetone monooxyge 99.9 2.4E-25 8.3E-30 215.9 16.2 286 13-306 13-468 (542)
92 4ap3_A Steroid monooxygenase; 99.9 2.3E-25 7.7E-30 215.6 12.7 283 14-305 19-472 (549)
93 2ywl_A Thioredoxin reductase r 99.9 7.9E-23 2.7E-27 169.7 16.5 156 141-307 3-174 (180)
94 4b63_A L-ornithine N5 monooxyg 99.9 9.3E-21 3.2E-25 181.8 22.9 195 101-295 199-479 (501)
95 2cul_A Glucose-inhibited divis 99.6 2.9E-15 1E-19 129.1 10.5 156 140-303 4-231 (232)
96 2e5v_A L-aspartate oxidase; ar 99.6 2.3E-16 7.8E-21 150.1 1.5 181 101-301 161-366 (472)
97 3fpz_A Thiazole biosynthetic e 99.6 4.3E-18 1.5E-22 154.6 -12.0 243 15-304 64-325 (326)
98 2gqf_A Hypothetical protein HI 99.4 2.1E-13 7.3E-18 126.9 5.8 39 13-51 1-40 (401)
99 3ces_A MNMG, tRNA uridine 5-ca 99.3 3.4E-12 1.2E-16 123.7 11.6 141 15-171 27-220 (651)
100 3k7m_X 6-hydroxy-L-nicotine ox 99.3 3.2E-14 1.1E-18 134.0 -3.1 95 181-278 203-307 (431)
101 2zxi_A TRNA uridine 5-carboxym 99.2 8.7E-11 3E-15 113.4 12.8 47 259-308 381-427 (637)
102 1rp0_A ARA6, thiazole biosynth 99.2 8.5E-11 2.9E-15 104.2 11.3 165 139-305 39-276 (284)
103 3cp8_A TRNA uridine 5-carboxym 99.1 8.3E-11 2.8E-15 114.0 8.0 46 260-308 371-416 (641)
104 3oz2_A Digeranylgeranylglycero 99.1 3.9E-10 1.3E-14 104.4 12.4 38 14-51 2-40 (397)
105 3v76_A Flavoprotein; structura 99.1 6.1E-10 2.1E-14 103.9 13.4 54 182-236 132-187 (417)
106 2gag_B Heterotetrameric sarcos 99.0 1.6E-09 5.4E-14 100.8 13.1 53 183-236 175-230 (405)
107 4dgk_A Phytoene dehydrogenase; 99.0 2.2E-09 7.4E-14 102.9 14.0 54 182-235 221-277 (501)
108 3dme_A Conserved exported prot 99.0 5.6E-09 1.9E-13 95.6 15.3 62 182-244 150-216 (369)
109 3dje_A Fructosyl amine: oxygen 99.0 1.9E-09 6.4E-14 101.5 12.3 54 182-235 161-220 (438)
110 4gde_A UDP-galactopyranose mut 99.0 2.2E-10 7.6E-15 110.1 5.5 51 183-233 223-273 (513)
111 3nlc_A Uncharacterized protein 99.0 6.3E-10 2.2E-14 106.9 8.2 56 182-237 220-278 (549)
112 1ryi_A Glycine oxidase; flavop 99.0 1.2E-09 4.2E-14 100.8 9.6 54 182-236 164-219 (382)
113 3nrn_A Uncharacterized protein 99.0 1.2E-09 4.1E-14 102.4 8.3 61 181-241 188-248 (421)
114 3nyc_A D-arginine dehydrogenas 98.9 1.3E-09 4.3E-14 100.5 8.1 53 182-235 154-208 (381)
115 3alj_A 2-methyl-3-hydroxypyrid 98.9 2E-08 7E-13 92.6 15.0 54 183-237 108-161 (379)
116 2gf3_A MSOX, monomeric sarcosi 98.9 2E-08 6.9E-13 92.7 14.4 69 165-236 135-205 (389)
117 1y56_B Sarcosine oxidase; dehy 98.9 1.6E-08 5.5E-13 93.3 13.5 54 182-236 149-205 (382)
118 2cul_A Glucose-inhibited divis 98.9 2.5E-09 8.7E-14 91.7 7.5 101 15-116 2-125 (232)
119 3pvc_A TRNA 5-methylaminomethy 98.9 2.1E-08 7.4E-13 99.7 15.1 54 182-235 412-468 (689)
120 1s3e_A Amine oxidase [flavin-c 98.9 5.3E-10 1.8E-14 107.7 3.4 42 13-54 1-43 (520)
121 3ps9_A TRNA 5-methylaminomethy 98.9 3.9E-08 1.3E-12 97.7 16.4 54 182-235 417-472 (676)
122 2ywl_A Thioredoxin reductase r 98.9 2E-09 6.7E-14 88.5 5.9 101 16-117 1-111 (180)
123 3cgv_A Geranylgeranyl reductas 98.8 5.7E-09 2E-13 96.7 8.3 54 183-236 103-162 (397)
124 3rp8_A Flavoprotein monooxygen 98.8 3.2E-08 1.1E-12 92.1 12.8 53 183-237 128-182 (407)
125 2vou_A 2,6-dihydroxypyridine h 98.8 5.6E-08 1.9E-12 90.2 14.0 51 184-236 101-153 (397)
126 3nix_A Flavoprotein/dehydrogen 98.8 9.5E-09 3.2E-13 96.1 8.7 54 183-236 107-166 (421)
127 3ka7_A Oxidoreductase; structu 98.8 1.3E-08 4.4E-13 95.4 9.5 59 182-241 196-257 (425)
128 3i3l_A Alkylhalidase CMLS; fla 98.8 1.3E-08 4.3E-13 99.1 9.1 54 183-236 129-188 (591)
129 3hyw_A Sulfide-quinone reducta 98.8 6.5E-09 2.2E-13 97.6 6.0 97 139-236 2-109 (430)
130 2i0z_A NAD(FAD)-utilizing dehy 98.8 3.2E-08 1.1E-12 93.3 10.8 55 182-236 134-191 (447)
131 2uzz_A N-methyl-L-tryptophan o 98.7 7.9E-08 2.7E-12 88.2 12.1 53 182-235 149-203 (372)
132 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 3.2E-08 1.1E-12 89.9 9.0 43 192-234 119-163 (342)
133 3pl8_A Pyranose 2-oxidase; sub 98.7 5.1E-10 1.7E-14 109.7 -3.2 59 193-251 271-339 (623)
134 2oln_A NIKD protein; flavoprot 98.7 2.3E-07 8E-12 85.9 14.9 52 183-235 154-207 (397)
135 3klj_A NAD(FAD)-dependent dehy 98.7 7.5E-08 2.6E-12 88.9 11.4 99 138-238 8-118 (385)
136 2x3n_A Probable FAD-dependent 98.7 1.4E-07 4.8E-12 87.5 13.2 55 183-237 108-167 (399)
137 3vrd_B FCCB subunit, flavocyto 98.7 3E-08 1E-12 92.1 8.6 100 139-239 2-111 (401)
138 1yvv_A Amine oxidase, flavin-c 98.7 1.4E-07 4.9E-12 85.1 11.6 48 187-235 111-161 (336)
139 2bry_A NEDD9 interacting prote 98.6 4.5E-08 1.5E-12 93.5 7.4 133 104-238 37-232 (497)
140 3kkj_A Amine oxidase, flavin-c 98.6 2.5E-08 8.5E-13 87.1 5.1 38 16-53 2-40 (336)
141 3axb_A Putative oxidoreductase 98.6 5.2E-07 1.8E-11 85.0 14.2 52 183-235 182-253 (448)
142 1pj5_A N,N-dimethylglycine oxi 98.6 2E-07 6.8E-12 94.7 11.8 53 182-235 151-206 (830)
143 3sx6_A Sulfide-quinone reducta 98.6 6.1E-08 2.1E-12 91.2 7.5 100 140-240 5-116 (437)
144 3atr_A Conserved archaeal prot 98.6 1.7E-07 6E-12 88.5 10.1 54 183-236 101-162 (453)
145 3e1t_A Halogenase; flavoprotei 98.6 7.7E-08 2.6E-12 92.4 7.8 54 183-236 112-172 (512)
146 1rp0_A ARA6, thiazole biosynth 98.6 1.7E-07 5.7E-12 82.9 9.2 37 15-51 38-76 (284)
147 2e4g_A Tryptophan halogenase; 98.6 2.7E-07 9.1E-12 89.4 11.1 53 183-236 195-252 (550)
148 3h8l_A NADH oxidase; membrane 98.6 7.2E-08 2.5E-12 89.8 6.8 99 140-239 2-116 (409)
149 3ef6_A Toluene 1,2-dioxygenase 98.6 3.7E-07 1.3E-11 85.1 11.5 98 140-238 3-113 (410)
150 1qo8_A Flavocytochrome C3 fuma 98.5 6.2E-07 2.1E-11 87.1 12.5 55 182-236 250-312 (566)
151 3h28_A Sulfide-quinone reducta 98.5 7.7E-08 2.6E-12 90.3 5.8 99 140-239 3-112 (430)
152 1y0p_A Fumarate reductase flav 98.5 1E-06 3.5E-11 85.7 13.9 54 182-235 255-316 (571)
153 2qa1_A PGAE, polyketide oxygen 98.5 3.6E-07 1.2E-11 87.4 10.4 53 183-235 107-164 (500)
154 3f8d_A Thioredoxin reductase ( 98.5 3.6E-07 1.2E-11 81.9 9.8 96 140-238 16-127 (323)
155 3lzw_A Ferredoxin--NADP reduct 98.5 2.1E-07 7E-12 83.8 8.2 95 140-237 8-127 (332)
156 2xdo_A TETX2 protein; tetracyc 98.5 2.5E-07 8.6E-12 85.8 9.0 36 14-49 24-60 (398)
157 1q1r_A Putidaredoxin reductase 98.5 4E-07 1.4E-11 85.4 10.3 100 139-238 4-116 (431)
158 2qa2_A CABE, polyketide oxygen 98.5 6.4E-07 2.2E-11 85.6 11.8 53 183-235 108-165 (499)
159 2bry_A NEDD9 interacting prote 98.5 1.2E-07 4.3E-12 90.5 6.8 39 13-51 89-128 (497)
160 4a9w_A Monooxygenase; baeyer-v 98.5 4.7E-07 1.6E-11 82.2 10.2 93 140-235 4-131 (357)
161 4at0_A 3-ketosteroid-delta4-5a 98.5 2.1E-07 7.1E-12 89.3 7.5 54 183-236 203-264 (510)
162 3fmw_A Oxygenase; mithramycin, 98.5 1.9E-07 6.5E-12 90.6 6.8 53 183-235 149-206 (570)
163 3fg2_P Putative rubredoxin red 98.4 4E-07 1.4E-11 84.6 8.4 98 140-238 2-112 (404)
164 3da1_A Glycerol-3-phosphate de 98.4 3.4E-07 1.2E-11 88.7 8.1 54 182-235 170-231 (561)
165 2gqw_A Ferredoxin reductase; f 98.4 8.4E-07 2.9E-11 82.6 10.4 99 139-238 7-115 (408)
166 3lxd_A FAD-dependent pyridine 98.4 4.8E-07 1.7E-11 84.4 8.8 100 139-238 9-121 (415)
167 3ihg_A RDME; flavoenzyme, anth 98.4 2.9E-07 1E-11 88.8 7.6 54 183-236 121-183 (535)
168 3kd9_A Coenzyme A disulfide re 98.4 4.5E-07 1.5E-11 85.5 8.7 100 139-238 3-116 (449)
169 1xhc_A NADH oxidase /nitrite r 98.4 4.3E-07 1.5E-11 83.3 7.4 97 138-238 7-115 (367)
170 3itj_A Thioredoxin reductase 1 98.4 8.1E-07 2.8E-11 80.1 9.0 98 138-238 21-144 (338)
171 2qcu_A Aerobic glycerol-3-phos 98.4 1.4E-06 4.9E-11 83.2 11.1 54 182-235 149-209 (501)
172 2zbw_A Thioredoxin reductase; 98.4 9.5E-07 3.2E-11 79.7 9.3 94 140-235 6-120 (335)
173 1d4d_A Flavocytochrome C fumar 98.4 4.6E-06 1.6E-10 81.0 14.7 55 182-236 255-317 (572)
174 3fbs_A Oxidoreductase; structu 98.4 1.2E-06 4.1E-11 77.4 9.6 96 140-238 3-114 (297)
175 3ab1_A Ferredoxin--NADP reduct 98.4 1.4E-06 4.9E-11 79.5 10.1 95 139-235 14-130 (360)
176 3oc4_A Oxidoreductase, pyridin 98.4 6.1E-07 2.1E-11 84.7 7.9 99 140-238 3-117 (452)
177 4hb9_A Similarities with proba 98.3 1E-06 3.4E-11 81.8 8.5 33 17-49 2-35 (412)
178 2q0l_A TRXR, thioredoxin reduc 98.3 2.2E-06 7.5E-11 76.4 10.1 95 141-238 3-116 (311)
179 1fl2_A Alkyl hydroperoxide red 98.3 2E-06 6.8E-11 76.7 9.7 96 141-238 3-117 (310)
180 3iwa_A FAD-dependent pyridine 98.3 1.1E-06 3.8E-11 83.3 8.4 100 139-238 3-127 (472)
181 3ntd_A FAD-dependent pyridine 98.3 1.1E-06 3.9E-11 85.3 7.7 99 140-238 2-119 (565)
182 2bcg_G Secretory pathway GDP d 98.3 5.8E-07 2E-11 84.8 5.4 55 182-237 242-301 (453)
183 3ics_A Coenzyme A-disulfide re 98.3 2.1E-06 7.2E-11 83.8 9.2 101 138-238 35-154 (588)
184 2cdu_A NADPH oxidase; flavoenz 98.3 1E-06 3.6E-11 83.1 6.7 98 141-238 2-119 (452)
185 4ap3_A Steroid monooxygenase; 98.3 1.9E-06 6.5E-11 83.2 8.4 97 139-237 21-162 (549)
186 2q7v_A Thioredoxin reductase; 98.3 4.8E-06 1.6E-10 74.8 10.6 97 139-238 8-125 (325)
187 3gwf_A Cyclohexanone monooxyge 98.2 3.4E-06 1.2E-10 81.3 9.5 94 140-234 9-145 (540)
188 1nhp_A NADH peroxidase; oxidor 98.2 2.4E-06 8.3E-11 80.4 8.4 99 140-238 1-117 (447)
189 2gqf_A Hypothetical protein HI 98.2 5.6E-06 1.9E-10 76.7 10.5 95 140-237 5-169 (401)
190 3d1c_A Flavin-containing putat 98.2 6.2E-06 2.1E-10 75.3 10.7 95 140-237 5-144 (369)
191 1vdc_A NTR, NADPH dependent th 98.2 5E-06 1.7E-10 74.9 9.8 96 139-238 8-126 (333)
192 4fk1_A Putative thioredoxin re 98.2 4.6E-06 1.6E-10 74.2 9.5 97 140-238 7-119 (304)
193 1m6i_A Programmed cell death p 98.2 1.7E-06 5.9E-11 82.5 6.8 100 139-238 11-146 (493)
194 2gv8_A Monooxygenase; FMO, FAD 98.2 5.1E-06 1.7E-10 78.2 9.8 98 139-238 6-181 (447)
195 4eqs_A Coenzyme A disulfide re 98.2 1.4E-06 4.8E-11 81.8 5.9 98 141-238 2-118 (437)
196 2xve_A Flavin-containing monoo 98.2 3.4E-06 1.2E-10 79.8 8.4 99 140-238 3-170 (464)
197 2e1m_A L-glutamate oxidase; L- 98.2 1.3E-06 4.4E-11 79.9 5.1 46 11-56 39-86 (376)
198 4a5l_A Thioredoxin reductase; 98.2 2.9E-06 1E-10 75.7 7.1 96 140-238 5-123 (314)
199 1v0j_A UDP-galactopyranose mut 98.2 1.6E-06 5.5E-11 80.4 5.5 44 13-56 4-49 (399)
200 4gcm_A TRXR, thioredoxin reduc 98.2 1E-05 3.4E-10 72.2 10.5 97 140-238 7-118 (312)
201 3uox_A Otemo; baeyer-villiger 98.2 3.1E-06 1.1E-10 81.6 7.5 97 139-237 9-150 (545)
202 3r9u_A Thioredoxin reductase; 98.2 5.3E-06 1.8E-10 73.9 8.6 95 139-238 4-120 (315)
203 3cgb_A Pyridine nucleotide-dis 98.1 3E-06 1E-10 80.5 7.0 99 140-238 37-154 (480)
204 2b9w_A Putative aminooxidase; 98.1 1.9E-06 6.6E-11 80.4 5.3 41 14-54 4-46 (424)
205 1trb_A Thioredoxin reductase; 98.1 7.5E-06 2.6E-10 73.2 8.9 96 140-238 6-118 (320)
206 2a87_A TRXR, TR, thioredoxin r 98.1 1.1E-05 3.8E-10 72.8 9.9 97 139-238 14-128 (335)
207 1hyu_A AHPF, alkyl hydroperoxi 98.1 9.9E-06 3.4E-10 77.8 10.1 97 139-237 212-327 (521)
208 3jsk_A Cypbp37 protein; octame 98.1 2.2E-05 7.5E-10 70.4 11.4 163 139-304 79-335 (344)
209 3cty_A Thioredoxin reductase; 98.1 1.2E-05 4.2E-10 71.9 9.5 96 139-238 16-128 (319)
210 2bc0_A NADH oxidase; flavoprot 98.1 3.4E-06 1.2E-10 80.4 6.1 101 139-239 35-152 (490)
211 3hdq_A UDP-galactopyranose mut 98.1 2.8E-06 9.7E-11 78.2 5.2 44 13-56 26-70 (397)
212 1rsg_A FMS1 protein; FAD bindi 98.1 1.7E-06 5.7E-11 83.1 3.7 40 15-54 7-48 (516)
213 3c96_A Flavin-containing monoo 98.1 2.4E-06 8.3E-11 79.5 4.7 38 13-50 1-40 (410)
214 3s5w_A L-ornithine 5-monooxyge 98.0 4.8E-06 1.6E-10 78.7 6.2 99 140-238 31-194 (463)
215 2jae_A L-amino acid oxidase; o 98.0 3.4E-06 1.2E-10 80.3 5.1 41 13-53 8-49 (489)
216 1sez_A Protoporphyrinogen oxid 98.0 3.8E-06 1.3E-10 80.3 5.1 42 13-54 10-52 (504)
217 2vvm_A Monoamine oxidase N; FA 98.0 3.9E-06 1.3E-10 80.1 5.0 53 183-235 256-311 (495)
218 1c0p_A D-amino acid oxidase; a 98.0 4.2E-06 1.4E-10 76.4 4.9 36 13-48 3-39 (363)
219 3nks_A Protoporphyrinogen oxid 98.0 3.4E-06 1.2E-10 80.0 4.4 51 183-234 235-288 (477)
220 2ivd_A PPO, PPOX, protoporphyr 98.0 4E-06 1.4E-10 79.6 4.8 42 13-54 13-55 (478)
221 2yqu_A 2-oxoglutarate dehydrog 98.0 5.2E-06 1.8E-10 78.3 5.2 96 16-120 167-268 (455)
222 4g6h_A Rotenone-insensitive NA 98.0 1.2E-05 4.1E-10 76.7 7.7 97 139-238 42-171 (502)
223 3i6d_A Protoporphyrinogen oxid 98.0 2.4E-06 8.3E-11 80.8 2.8 38 197-234 248-287 (470)
224 2yg5_A Putrescine oxidase; oxi 98.0 3.2E-06 1.1E-10 79.6 3.5 40 15-54 4-44 (453)
225 2gjc_A Thiazole biosynthetic e 98.0 1.8E-05 6.1E-10 70.6 8.0 165 139-304 65-325 (326)
226 2v3a_A Rubredoxin reductase; a 97.9 1.1E-05 3.6E-10 74.4 6.5 99 139-238 4-115 (384)
227 1cjc_A Protein (adrenodoxin re 97.9 1E-05 3.4E-10 76.4 6.3 92 138-236 5-106 (460)
228 2vdc_G Glutamate synthase [NAD 97.9 8.1E-06 2.8E-10 76.9 5.6 88 139-235 122-218 (456)
229 1k0i_A P-hydroxybenzoate hydro 97.9 7.1E-06 2.4E-10 75.8 4.8 34 16-49 2-36 (394)
230 3ihm_A Styrene monooxygenase A 97.9 4.9E-06 1.7E-10 77.9 3.7 33 16-48 22-55 (430)
231 3c4n_A Uncharacterized protein 97.9 6.6E-06 2.3E-10 76.4 4.5 53 182-235 172-235 (405)
232 2bi7_A UDP-galactopyranose mut 97.9 8.3E-06 2.8E-10 75.1 5.0 40 16-55 3-43 (384)
233 3ces_A MNMG, tRNA uridine 5-ca 97.9 7.3E-05 2.5E-09 72.6 11.8 94 140-236 29-181 (651)
234 3p1w_A Rabgdi protein; GDI RAB 97.9 7.3E-06 2.5E-10 77.1 4.5 54 182-235 256-313 (475)
235 1d5t_A Guanine nucleotide diss 97.9 8.8E-06 3E-10 76.3 5.1 56 182-237 234-291 (433)
236 3lov_A Protoporphyrinogen oxid 97.9 7.2E-06 2.4E-10 77.8 4.6 39 15-53 3-44 (475)
237 3jsk_A Cypbp37 protein; octame 97.9 8.3E-06 2.9E-10 73.2 4.6 37 15-51 78-117 (344)
238 4dsg_A UDP-galactopyranose mut 97.9 8.6E-06 2.9E-10 77.4 4.9 43 14-56 7-51 (484)
239 1k0i_A P-hydroxybenzoate hydro 97.9 6.3E-05 2.2E-09 69.3 10.7 96 140-237 3-164 (394)
240 2iid_A L-amino-acid oxidase; f 97.9 9E-06 3.1E-10 77.6 5.0 43 12-54 29-72 (498)
241 3c4n_A Uncharacterized protein 97.9 5.8E-05 2E-09 70.0 10.3 35 140-174 37-71 (405)
242 1i8t_A UDP-galactopyranose mut 97.9 9.7E-06 3.3E-10 74.2 4.9 39 16-54 1-40 (367)
243 2eq6_A Pyruvate dehydrogenase 97.9 1.3E-05 4.6E-10 75.7 5.9 96 16-120 169-275 (464)
244 1xdi_A RV3303C-LPDA; reductase 97.8 7.6E-05 2.6E-09 71.2 10.8 97 140-238 3-158 (499)
245 2zxi_A TRNA uridine 5-carboxym 97.8 0.00012 4.1E-09 70.9 12.0 96 139-237 27-181 (637)
246 1w4x_A Phenylacetone monooxyge 97.8 5.9E-05 2E-09 72.8 9.9 94 140-235 17-153 (542)
247 1lqt_A FPRA; NADP+ derivative, 97.8 9.1E-06 3.1E-10 76.6 4.0 90 139-235 3-107 (456)
248 1ges_A Glutathione reductase; 97.8 1.5E-05 5E-10 75.1 5.4 96 16-120 167-269 (450)
249 4b1b_A TRXR, thioredoxin reduc 97.8 1.4E-05 4.8E-10 76.8 5.0 97 16-122 223-325 (542)
250 1lvl_A Dihydrolipoamide dehydr 97.8 1.2E-05 4.1E-10 75.9 4.3 96 16-120 171-272 (458)
251 3l8k_A Dihydrolipoyl dehydroge 97.8 4.6E-05 1.6E-09 72.0 8.3 96 140-238 5-146 (466)
252 2r0c_A REBC; flavin adenine di 97.8 1.1E-05 3.7E-10 78.1 4.0 35 16-50 26-61 (549)
253 2qae_A Lipoamide, dihydrolipoy 97.8 5.1E-05 1.7E-09 71.8 8.3 96 140-238 3-150 (468)
254 2gmh_A Electron transfer flavo 97.8 1.2E-05 4.1E-10 78.2 4.0 36 16-51 35-77 (584)
255 2r9z_A Glutathione amide reduc 97.8 1.9E-05 6.6E-10 74.6 5.2 96 16-120 166-268 (463)
256 1zk7_A HGII, reductase, mercur 97.8 0.00011 3.7E-09 69.5 10.4 97 139-238 4-152 (467)
257 1dxl_A Dihydrolipoamide dehydr 97.8 6.4E-05 2.2E-09 71.1 8.6 97 139-238 6-153 (470)
258 3cp8_A TRNA uridine 5-carboxym 97.7 0.00018 6.2E-09 69.8 11.5 96 139-237 21-175 (641)
259 3c4a_A Probable tryptophan hyd 97.7 1.8E-05 6.3E-10 72.7 4.5 34 17-50 1-37 (381)
260 2dkh_A 3-hydroxybenzoate hydro 97.7 2E-05 6.9E-10 77.5 5.0 35 15-49 31-67 (639)
261 1y56_A Hypothetical protein PH 97.7 2.7E-05 9.2E-10 74.2 5.5 96 139-238 108-221 (493)
262 2gjc_A Thiazole biosynthetic e 97.7 2.1E-05 7.1E-10 70.2 4.3 36 16-51 65-103 (326)
263 1ebd_A E3BD, dihydrolipoamide 97.7 0.00014 4.9E-09 68.4 10.3 95 140-238 4-147 (455)
264 1jnr_A Adenylylsulfate reducta 97.7 2.2E-05 7.5E-10 77.3 4.7 34 16-49 22-60 (643)
265 2aqj_A Tryptophan halogenase, 97.7 2.1E-05 7.2E-10 75.8 4.5 53 183-236 166-222 (538)
266 2hqm_A GR, grase, glutathione 97.7 0.00021 7E-09 67.8 10.8 98 139-239 11-163 (479)
267 1ojt_A Surface protein; redox- 97.7 2.7E-05 9.3E-10 74.0 4.6 96 16-120 185-290 (482)
268 1onf_A GR, grase, glutathione 97.7 6.5E-05 2.2E-09 71.7 7.1 96 16-120 176-279 (500)
269 1gte_A Dihydropyrimidine dehyd 97.7 3.4E-05 1.2E-09 80.0 5.4 92 139-237 187-289 (1025)
270 3g3e_A D-amino-acid oxidase; F 97.7 2.2E-05 7.7E-10 71.2 3.6 44 182-235 142-185 (351)
271 2xdo_A TETX2 protein; tetracyc 97.6 0.00015 5.1E-09 67.0 9.1 97 139-237 26-183 (398)
272 2z3y_A Lysine-specific histone 97.6 3.8E-05 1.3E-09 75.9 5.1 43 13-55 104-147 (662)
273 1chu_A Protein (L-aspartate ox 97.6 3.3E-05 1.1E-09 74.4 4.5 36 15-50 7-42 (540)
274 3g5s_A Methylenetetrahydrofola 97.6 4.3E-05 1.5E-09 69.3 4.8 47 259-308 320-366 (443)
275 4gut_A Lysine-specific histone 97.6 3.8E-05 1.3E-09 76.9 4.8 40 13-52 333-373 (776)
276 1b37_A Protein (polyamine oxid 97.6 3.7E-05 1.3E-09 72.8 4.6 41 15-55 3-45 (472)
277 2pyx_A Tryptophan halogenase; 97.6 3.1E-05 1.1E-09 74.5 4.0 53 183-236 176-233 (526)
278 2wpf_A Trypanothione reductase 97.6 5.9E-05 2E-09 71.9 5.9 95 16-119 191-295 (495)
279 1fec_A Trypanothione reductase 97.6 6.5E-05 2.2E-09 71.5 6.2 96 16-120 187-292 (490)
280 2gmh_A Electron transfer flavo 97.6 0.00048 1.6E-08 67.0 12.4 97 140-236 36-217 (584)
281 1v59_A Dihydrolipoamide dehydr 97.6 0.00029 9.9E-09 66.7 10.6 92 140-236 6-157 (478)
282 3urh_A Dihydrolipoyl dehydroge 97.6 0.00048 1.6E-08 65.5 12.0 93 139-236 25-170 (491)
283 1zmd_A Dihydrolipoyl dehydroge 97.6 0.00018 6.2E-09 68.1 9.1 96 140-238 7-154 (474)
284 2xag_A Lysine-specific histone 97.6 5.2E-05 1.8E-09 76.5 5.5 42 13-54 275-317 (852)
285 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00014 4.6E-09 68.8 7.9 93 140-238 4-148 (464)
286 2wdq_A Succinate dehydrogenase 97.5 3.7E-05 1.3E-09 74.8 3.6 35 16-50 7-42 (588)
287 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00018 6.2E-09 71.2 8.4 85 139-238 373-469 (671)
288 2weu_A Tryptophan 5-halogenase 97.5 3.9E-05 1.3E-09 73.4 3.4 53 183-236 174-230 (511)
289 1mo9_A ORF3; nucleotide bindin 97.5 0.00036 1.2E-08 66.9 10.0 94 140-238 44-188 (523)
290 2rgh_A Alpha-glycerophosphate 97.5 6.9E-05 2.4E-09 72.7 4.9 55 181-235 187-249 (571)
291 3dk9_A Grase, GR, glutathione 97.5 0.00028 9.5E-09 66.9 8.9 95 139-238 20-162 (478)
292 2h88_A Succinate dehydrogenase 97.5 5.4E-05 1.8E-09 73.9 3.9 35 15-49 17-52 (621)
293 3gyx_A Adenylylsulfate reducta 97.5 8.8E-05 3E-09 72.9 5.4 46 260-306 446-491 (662)
294 1pn0_A Phenol 2-monooxygenase; 97.5 4E-05 1.4E-09 75.7 3.0 34 16-49 8-47 (665)
295 3o0h_A Glutathione reductase; 97.5 8.6E-05 3E-09 70.5 5.2 96 16-120 191-292 (484)
296 2bs2_A Quinol-fumarate reducta 97.5 7E-05 2.4E-09 73.7 4.6 35 15-49 4-39 (660)
297 1kf6_A Fumarate reductase flav 97.4 7.6E-05 2.6E-09 72.8 4.3 51 253-304 359-416 (602)
298 3k30_A Histamine dehydrogenase 97.4 9.8E-05 3.3E-09 73.4 5.2 87 139-237 391-489 (690)
299 4hb9_A Similarities with proba 97.4 0.00059 2E-08 62.9 10.2 93 141-235 3-165 (412)
300 4dna_A Probable glutathione re 97.4 0.00039 1.3E-08 65.6 9.0 92 140-237 6-146 (463)
301 3c4a_A Probable tryptophan hyd 97.4 0.00028 9.6E-09 64.7 7.6 88 140-236 1-143 (381)
302 4g65_A TRK system potassium up 97.4 0.00042 1.5E-08 65.1 8.6 34 16-49 3-37 (461)
303 2aqj_A Tryptophan halogenase, 97.4 0.0011 3.9E-08 63.7 11.8 36 139-174 5-41 (538)
304 3c96_A Flavin-containing monoo 97.4 0.00038 1.3E-08 64.5 8.1 96 139-236 4-169 (410)
305 3ic9_A Dihydrolipoamide dehydr 97.4 0.0002 7E-09 68.1 6.4 95 16-120 174-278 (492)
306 1ju2_A HydroxynitrIle lyase; f 97.4 8E-05 2.7E-09 71.7 3.4 37 14-50 24-60 (536)
307 3lad_A Dihydrolipoamide dehydr 97.4 0.0007 2.4E-08 64.0 9.8 95 140-237 4-155 (476)
308 3qfa_A Thioredoxin reductase 1 97.3 0.00039 1.3E-08 66.6 7.9 96 140-238 33-187 (519)
309 3t37_A Probable dehydrogenase; 97.3 0.00013 4.3E-09 70.1 4.3 36 15-50 16-53 (526)
310 1kdg_A CDH, cellobiose dehydro 97.3 0.00015 5.3E-09 69.9 4.5 60 188-247 201-272 (546)
311 3dgh_A TRXR-1, thioredoxin red 97.3 0.0002 6.9E-09 67.9 5.0 95 16-120 187-293 (483)
312 2gag_A Heterotetrameric sarcos 97.3 0.00063 2.2E-08 70.0 8.9 98 139-238 128-255 (965)
313 3dgz_A Thioredoxin reductase 2 97.3 0.00029 1E-08 66.9 5.8 95 16-120 185-291 (488)
314 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00015 5.1E-09 71.4 3.4 35 16-50 56-100 (721)
315 3qvp_A Glucose oxidase; oxidor 97.2 0.00024 8.2E-09 68.7 4.8 61 187-247 232-304 (583)
316 3q9t_A Choline dehydrogenase a 97.1 0.00034 1.2E-08 67.7 4.7 35 15-49 5-41 (577)
317 1o94_A Tmadh, trimethylamine d 97.1 0.00022 7.5E-09 71.2 3.2 87 139-237 389-492 (729)
318 1vg0_A RAB proteins geranylger 97.0 0.00061 2.1E-08 66.2 5.4 56 181-236 377-437 (650)
319 1coy_A Cholesterol oxidase; ox 97.0 0.00057 2E-08 65.2 4.9 39 12-50 7-46 (507)
320 2pyx_A Tryptophan halogenase; 97.0 0.0049 1.7E-07 59.0 11.3 36 139-174 7-52 (526)
321 1n4w_A CHOD, cholesterol oxida 96.9 0.00056 1.9E-08 65.2 4.2 37 15-51 4-41 (504)
322 2x8g_A Thioredoxin glutathione 96.9 0.0011 3.7E-08 64.7 5.9 32 16-47 286-318 (598)
323 1gpe_A Protein (glucose oxidas 96.9 0.00069 2.4E-08 65.8 4.5 36 15-50 23-60 (587)
324 3fim_B ARYL-alcohol oxidase; A 96.9 0.00046 1.6E-08 66.6 3.1 35 16-50 2-38 (566)
325 2weu_A Tryptophan 5-halogenase 96.9 0.0041 1.4E-07 59.3 9.7 35 140-174 3-38 (511)
326 1kf6_A Fumarate reductase flav 96.8 0.0092 3.1E-07 58.1 11.4 50 186-235 138-196 (602)
327 2e5v_A L-aspartate oxidase; ar 96.7 0.004 1.4E-07 58.8 8.6 52 185-237 122-177 (472)
328 2dkh_A 3-hydroxybenzoate hydro 96.7 0.0055 1.9E-07 60.1 9.5 95 140-235 33-210 (639)
329 2jbv_A Choline oxidase; alcoho 96.6 0.0014 4.7E-08 63.2 4.6 36 15-50 12-49 (546)
330 2r0c_A REBC; flavin adenine di 96.6 0.0058 2E-07 58.9 8.8 91 140-235 27-195 (549)
331 3i6d_A Protoporphyrinogen oxid 96.5 0.0071 2.4E-07 56.7 8.6 37 140-176 6-46 (470)
332 4b63_A L-ornithine N5 monooxyg 96.5 0.0095 3.3E-07 56.6 9.1 99 141-239 41-217 (501)
333 2wdq_A Succinate dehydrogenase 96.4 0.027 9.2E-07 54.6 11.8 49 186-234 147-204 (588)
334 3fwz_A Inner membrane protein 96.4 0.0038 1.3E-07 48.3 4.8 38 12-49 3-41 (140)
335 2rgh_A Alpha-glycerophosphate 96.3 0.017 5.9E-07 55.8 9.9 34 139-174 32-65 (571)
336 2g1u_A Hypothetical protein TM 96.1 0.0051 1.8E-07 48.4 4.6 39 11-49 14-53 (155)
337 4gut_A Lysine-specific histone 96.1 0.035 1.2E-06 55.6 11.4 39 195-233 542-582 (776)
338 2h88_A Succinate dehydrogenase 96.0 0.032 1.1E-06 54.3 10.2 49 186-234 159-215 (621)
339 3llv_A Exopolyphosphatase-rela 95.9 0.0065 2.2E-07 46.9 4.2 33 16-48 6-39 (141)
340 1id1_A Putative potassium chan 95.8 0.012 4.1E-07 46.1 5.1 34 15-48 2-36 (153)
341 3lk7_A UDP-N-acetylmuramoylala 95.7 0.033 1.1E-06 52.1 8.8 83 138-242 8-90 (451)
342 3fpz_A Thiazole biosynthetic e 95.5 0.011 3.8E-07 52.7 4.6 67 139-205 65-139 (326)
343 3kkj_A Amine oxidase, flavin-c 95.5 0.018 6E-07 49.1 5.6 42 261-306 289-330 (336)
344 2bs2_A Quinol-fumarate reducta 95.5 0.079 2.7E-06 52.0 10.7 48 187-234 163-218 (660)
345 1lss_A TRK system potassium up 95.4 0.013 4.6E-07 44.7 4.3 33 16-48 4-37 (140)
346 1pn0_A Phenol 2-monooxygenase; 95.4 0.03 1E-06 55.1 7.7 35 140-174 9-46 (665)
347 1chu_A Protein (L-aspartate ox 95.4 0.03 1E-06 53.6 7.3 32 140-174 9-40 (540)
348 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.05 1.7E-06 45.4 7.7 79 138-241 30-108 (223)
349 3eag_A UDP-N-acetylmuramate:L- 95.3 0.069 2.4E-06 47.6 9.0 81 139-243 4-85 (326)
350 3ic5_A Putative saccharopine d 95.2 0.018 6.1E-07 42.5 4.0 33 16-48 5-39 (118)
351 3p1w_A Rabgdi protein; GDI RAB 94.9 0.027 9.3E-07 52.8 5.4 45 11-55 15-60 (475)
352 3doj_A AT3G25530, dehydrogenas 94.9 0.024 8.1E-07 50.2 4.7 45 5-49 10-55 (310)
353 3c85_A Putative glutathione-re 94.8 0.034 1.2E-06 44.8 5.2 34 15-48 38-73 (183)
354 2hmt_A YUAA protein; RCK, KTN, 94.8 0.025 8.4E-07 43.4 4.0 33 16-48 6-39 (144)
355 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.037 1.2E-06 46.3 5.0 35 14-48 29-64 (223)
356 3nlc_A Uncharacterized protein 94.4 0.015 5E-07 55.8 2.1 48 256-305 497-544 (549)
357 4e12_A Diketoreductase; oxidor 94.1 0.05 1.7E-06 47.4 4.8 37 13-49 1-38 (283)
358 2x5o_A UDP-N-acetylmuramoylala 94.0 0.034 1.1E-06 51.9 3.8 35 15-49 4-39 (439)
359 2vvm_A Monoamine oxidase N; FA 94.0 0.071 2.4E-06 50.3 6.1 38 17-54 40-78 (495)
360 4dio_A NAD(P) transhydrogenase 94.0 0.051 1.7E-06 49.6 4.7 34 16-49 190-224 (405)
361 3lk7_A UDP-N-acetylmuramoylala 93.9 0.053 1.8E-06 50.7 4.9 34 15-48 8-42 (451)
362 1f0y_A HCDH, L-3-hydroxyacyl-C 93.9 0.059 2E-06 47.4 4.9 34 16-49 15-49 (302)
363 3l4b_C TRKA K+ channel protien 93.8 0.037 1.3E-06 46.1 3.4 32 18-49 2-34 (218)
364 1kyq_A Met8P, siroheme biosynt 93.8 0.034 1.2E-06 48.0 3.1 34 15-48 12-46 (274)
365 3p2y_A Alanine dehydrogenase/p 93.6 0.059 2E-06 48.8 4.4 34 15-48 183-217 (381)
366 1pzg_A LDH, lactate dehydrogen 93.6 0.077 2.6E-06 47.3 5.1 34 16-49 9-44 (331)
367 4dgk_A Phytoene dehydrogenase; 93.5 0.054 1.9E-06 51.2 4.2 35 140-176 2-36 (501)
368 1bg6_A N-(1-D-carboxylethyl)-L 93.4 0.066 2.3E-06 48.2 4.5 35 14-48 2-37 (359)
369 2iid_A L-amino-acid oxidase; f 93.2 0.15 5.1E-06 48.2 6.7 60 139-200 33-110 (498)
370 2a9f_A Putative malic enzyme ( 93.1 0.086 2.9E-06 47.7 4.5 35 14-48 186-222 (398)
371 3qha_A Putative oxidoreductase 93.0 0.091 3.1E-06 46.1 4.5 37 13-49 12-49 (296)
372 2ewd_A Lactate dehydrogenase,; 92.9 0.11 3.6E-06 46.1 4.9 36 13-48 1-38 (317)
373 4hv4_A UDP-N-acetylmuramate--L 92.8 0.31 1.1E-05 46.0 8.3 78 138-242 21-99 (494)
374 3rp8_A Flavoprotein monooxygen 92.6 0.17 5.7E-06 46.4 6.1 37 138-176 22-58 (407)
375 3i83_A 2-dehydropantoate 2-red 92.6 0.11 3.6E-06 46.2 4.5 32 17-48 3-35 (320)
376 3k6j_A Protein F01G10.3, confi 92.6 0.15 5E-06 47.5 5.6 35 15-49 53-88 (460)
377 2vou_A 2,6-dihydroxypyridine h 92.6 0.19 6.3E-06 45.9 6.3 57 139-197 5-63 (397)
378 1kyq_A Met8P, siroheme biosynt 92.5 0.13 4.5E-06 44.3 4.9 34 138-173 12-45 (274)
379 4ffl_A PYLC; amino acid, biosy 92.5 0.11 3.7E-06 47.0 4.6 34 16-49 1-35 (363)
380 3eag_A UDP-N-acetylmuramate:L- 92.5 0.12 3.9E-06 46.1 4.7 35 15-49 3-39 (326)
381 1t2d_A LDH-P, L-lactate dehydr 92.5 0.14 4.6E-06 45.5 5.0 35 14-48 2-38 (322)
382 3k96_A Glycerol-3-phosphate de 92.4 0.14 4.9E-06 46.1 5.2 35 15-49 28-63 (356)
383 3gvi_A Malate dehydrogenase; N 92.4 0.13 4.5E-06 45.6 4.9 36 14-49 5-42 (324)
384 1x13_A NAD(P) transhydrogenase 92.4 0.11 3.8E-06 47.6 4.5 34 16-49 172-206 (401)
385 3hn7_A UDP-N-acetylmuramate-L- 92.3 0.52 1.8E-05 44.8 9.2 84 134-242 14-98 (524)
386 1vl6_A Malate oxidoreductase; 92.3 0.12 4.2E-06 46.6 4.5 34 14-47 190-225 (388)
387 4e21_A 6-phosphogluconate dehy 92.3 0.12 4.1E-06 46.6 4.5 39 10-48 16-55 (358)
388 3nix_A Flavoprotein/dehydrogen 92.3 0.14 4.6E-06 47.1 5.0 33 140-174 6-38 (421)
389 1l7d_A Nicotinamide nucleotide 92.2 0.13 4.5E-06 46.9 4.7 34 15-48 171-205 (384)
390 3oz2_A Digeranylgeranylglycero 92.1 0.14 4.7E-06 46.4 4.8 93 141-235 6-161 (397)
391 3ghy_A Ketopantoate reductase 92.1 0.14 4.9E-06 45.6 4.8 32 16-47 3-35 (335)
392 2e4g_A Tryptophan halogenase; 92.1 0.15 5.1E-06 49.0 5.1 36 139-174 25-61 (550)
393 2uyy_A N-PAC protein; long-cha 92.0 0.17 5.9E-06 44.6 5.2 37 13-49 27-64 (316)
394 3oj0_A Glutr, glutamyl-tRNA re 91.9 0.1 3.5E-06 40.2 3.2 33 16-48 21-54 (144)
395 3hn2_A 2-dehydropantoate 2-red 91.9 0.12 4.3E-06 45.5 4.1 32 17-48 3-35 (312)
396 2ew2_A 2-dehydropantoate 2-red 91.9 0.13 4.6E-06 45.1 4.3 32 17-48 4-36 (316)
397 3alj_A 2-methyl-3-hydroxypyrid 91.9 0.22 7.4E-06 45.2 5.8 36 139-176 11-46 (379)
398 3i3l_A Alkylhalidase CMLS; fla 91.9 0.25 8.7E-06 47.8 6.5 35 139-175 23-57 (591)
399 3q2o_A Phosphoribosylaminoimid 91.9 0.18 6.3E-06 45.9 5.3 37 13-49 11-48 (389)
400 4huj_A Uncharacterized protein 91.8 0.091 3.1E-06 43.8 3.0 37 13-49 20-58 (220)
401 3pid_A UDP-glucose 6-dehydroge 91.7 0.16 5.6E-06 46.8 4.8 34 16-49 36-69 (432)
402 2raf_A Putative dinucleotide-b 91.7 0.18 6.1E-06 41.6 4.6 34 16-49 19-53 (209)
403 3vtf_A UDP-glucose 6-dehydroge 91.7 0.19 6.5E-06 46.5 5.1 39 11-49 16-55 (444)
404 3g5s_A Methylenetetrahydrofola 91.6 0.2 6.7E-06 45.7 5.0 33 16-48 1-34 (443)
405 4gde_A UDP-galactopyranose mut 91.5 0.2 6.8E-06 47.3 5.3 36 140-176 11-46 (513)
406 2x5o_A UDP-N-acetylmuramoylala 91.5 0.19 6.5E-06 46.7 5.0 79 138-242 4-82 (439)
407 3e8x_A Putative NAD-dependent 91.5 0.17 5.9E-06 42.4 4.3 37 12-48 17-55 (236)
408 1lld_A L-lactate dehydrogenase 91.4 0.18 6.2E-06 44.6 4.6 33 16-48 7-42 (319)
409 3l9w_A Glutathione-regulated p 91.4 0.15 5.3E-06 46.9 4.2 34 16-49 4-38 (413)
410 1pjc_A Protein (L-alanine dehy 91.3 0.18 6E-06 45.6 4.5 33 16-48 167-200 (361)
411 1d5t_A Guanine nucleotide diss 91.3 0.094 3.2E-06 48.7 2.7 45 13-57 3-48 (433)
412 1yvv_A Amine oxidase, flavin-c 91.3 0.21 7.2E-06 44.2 4.9 34 140-175 3-36 (336)
413 1ks9_A KPA reductase;, 2-dehyd 91.2 0.19 6.5E-06 43.6 4.5 32 18-49 2-34 (291)
414 1evy_A Glycerol-3-phosphate de 91.2 0.14 4.9E-06 46.2 3.8 32 17-48 16-48 (366)
415 3g17_A Similar to 2-dehydropan 91.2 0.16 5.5E-06 44.4 4.0 32 17-48 3-35 (294)
416 3ihg_A RDME; flavoenzyme, anth 91.1 0.31 1.1E-05 46.5 6.3 35 140-176 6-40 (535)
417 2bcg_G Secretory pathway GDP d 91.1 0.22 7.4E-06 46.5 5.0 46 11-56 6-52 (453)
418 2qa2_A CABE, polyketide oxygen 91.1 0.26 9E-06 46.6 5.6 37 138-176 11-47 (499)
419 2dpo_A L-gulonate 3-dehydrogen 91.1 0.17 5.7E-06 44.9 4.0 35 15-49 5-40 (319)
420 2x3n_A Probable FAD-dependent 91.0 0.3 1E-05 44.5 5.9 35 140-176 7-41 (399)
421 3qsg_A NAD-binding phosphogluc 90.9 0.19 6.5E-06 44.3 4.3 34 15-48 23-58 (312)
422 3gpi_A NAD-dependent epimerase 90.9 0.26 8.8E-06 42.6 5.1 34 16-49 3-37 (286)
423 3ego_A Probable 2-dehydropanto 90.9 0.22 7.5E-06 43.8 4.6 32 17-48 3-34 (307)
424 3g79_A NDP-N-acetyl-D-galactos 90.9 0.2 6.8E-06 47.0 4.5 36 14-49 16-54 (478)
425 1pjq_A CYSG, siroheme synthase 90.9 0.58 2E-05 43.7 7.6 79 138-241 11-90 (457)
426 2qa1_A PGAE, polyketide oxygen 90.8 0.27 9.4E-06 46.5 5.5 37 138-176 10-46 (500)
427 3abi_A Putative uncharacterize 90.8 0.2 7E-06 45.2 4.4 34 15-48 15-48 (365)
428 3nks_A Protoporphyrinogen oxid 90.8 0.3 1E-05 45.6 5.8 39 16-54 2-43 (477)
429 3ihm_A Styrene monooxygenase A 90.8 0.23 8E-06 45.9 4.9 34 139-174 22-55 (430)
430 3dtt_A NADP oxidoreductase; st 90.8 0.22 7.5E-06 42.2 4.4 37 13-49 16-53 (245)
431 2izz_A Pyrroline-5-carboxylate 90.7 0.22 7.4E-06 44.2 4.4 38 11-48 17-59 (322)
432 3tl2_A Malate dehydrogenase; c 90.7 0.25 8.6E-06 43.6 4.8 33 15-47 7-41 (315)
433 3nrn_A Uncharacterized protein 90.6 0.26 9E-06 45.3 5.1 35 140-176 1-35 (421)
434 3ado_A Lambda-crystallin; L-gu 90.6 0.19 6.6E-06 44.3 4.0 34 16-49 6-40 (319)
435 2aef_A Calcium-gated potassium 90.6 0.15 5E-06 42.9 3.1 35 14-49 7-42 (234)
436 3rui_A Ubiquitin-like modifier 90.6 0.07 2.4E-06 47.5 1.1 47 2-48 20-68 (340)
437 2q3e_A UDP-glucose 6-dehydroge 90.6 0.21 7.3E-06 46.8 4.4 37 13-49 2-41 (467)
438 3dhn_A NAD-dependent epimerase 90.5 0.21 7.2E-06 41.4 3.9 35 14-48 2-38 (227)
439 3gg2_A Sugar dehydrogenase, UD 90.5 0.23 7.8E-06 46.3 4.5 33 17-49 3-36 (450)
440 2y0c_A BCEC, UDP-glucose dehyd 90.4 0.23 7.8E-06 46.7 4.5 34 16-49 8-42 (478)
441 1jw9_B Molybdopterin biosynthe 90.4 0.25 8.7E-06 42.0 4.4 33 16-48 31-65 (249)
442 3fmw_A Oxygenase; mithramycin, 90.4 0.39 1.3E-05 46.2 6.2 35 140-176 50-84 (570)
443 4ezb_A Uncharacterized conserv 90.3 0.14 4.9E-06 45.3 2.9 44 5-48 13-58 (317)
444 2hjr_A Malate dehydrogenase; m 90.3 0.3 1E-05 43.4 5.0 33 17-49 15-49 (328)
445 1pjq_A CYSG, siroheme synthase 90.2 0.2 7E-06 46.8 4.0 34 15-48 11-45 (457)
446 2vns_A Metalloreductase steap3 90.2 0.28 9.5E-06 40.6 4.4 34 15-48 27-61 (215)
447 3fwz_A Inner membrane protein 90.2 0.79 2.7E-05 34.8 6.7 76 139-235 7-82 (140)
448 3cky_A 2-hydroxymethyl glutara 90.2 0.23 7.9E-06 43.4 4.1 35 14-48 2-37 (301)
449 2eez_A Alanine dehydrogenase; 90.2 0.26 8.9E-06 44.6 4.5 34 15-48 165-199 (369)
450 2g1u_A Hypothetical protein TM 90.2 0.34 1.2E-05 37.7 4.6 40 134-175 14-53 (155)
451 3ka7_A Oxidoreductase; structu 90.1 0.31 1.1E-05 44.7 5.1 35 140-176 1-35 (425)
452 3gyx_A Adenylylsulfate reducta 90.1 0.22 7.7E-06 48.8 4.2 33 16-48 22-61 (662)
453 1y6j_A L-lactate dehydrogenase 90.0 0.3 1E-05 43.2 4.7 33 16-48 7-42 (318)
454 3ius_A Uncharacterized conserv 90.0 0.29 9.8E-06 42.2 4.5 33 16-48 5-38 (286)
455 1guz_A Malate dehydrogenase; o 89.9 0.28 9.7E-06 43.2 4.4 32 18-49 2-36 (310)
456 2vhw_A Alanine dehydrogenase; 89.9 0.28 9.7E-06 44.5 4.5 34 15-48 167-201 (377)
457 3p7m_A Malate dehydrogenase; p 89.7 0.37 1.3E-05 42.7 5.0 35 15-49 4-40 (321)
458 4gsl_A Ubiquitin-like modifier 89.7 0.09 3.1E-06 50.4 1.1 48 1-48 311-360 (615)
459 3phh_A Shikimate dehydrogenase 89.7 0.34 1.2E-05 41.6 4.6 33 16-48 118-151 (269)
460 1dlj_A UDP-glucose dehydrogena 89.6 0.29 9.9E-06 44.9 4.4 31 18-48 2-32 (402)
461 3qj4_A Renalase; FAD/NAD(P)-bi 89.6 0.33 1.1E-05 43.2 4.7 35 141-175 3-38 (342)
462 3oj0_A Glutr, glutamyl-tRNA re 89.6 0.57 2E-05 35.8 5.5 35 138-174 20-54 (144)
463 3l6d_A Putative oxidoreductase 89.6 0.46 1.6E-05 41.7 5.5 35 14-48 7-42 (306)
464 3g0o_A 3-hydroxyisobutyrate de 89.5 0.32 1.1E-05 42.6 4.5 33 16-48 7-40 (303)
465 2pv7_A T-protein [includes: ch 89.4 0.51 1.7E-05 41.2 5.7 33 16-48 21-55 (298)
466 2v6b_A L-LDH, L-lactate dehydr 89.4 0.34 1.2E-05 42.6 4.5 31 18-48 2-35 (304)
467 3v76_A Flavoprotein; structura 89.4 0.34 1.2E-05 44.7 4.7 35 139-175 27-61 (417)
468 1ez4_A Lactate dehydrogenase; 89.3 0.38 1.3E-05 42.5 4.8 36 13-48 2-40 (318)
469 1nyt_A Shikimate 5-dehydrogena 89.2 0.37 1.3E-05 41.5 4.5 34 15-48 118-152 (271)
470 3pdu_A 3-hydroxyisobutyrate de 89.2 0.31 1.1E-05 42.3 4.1 33 17-49 2-35 (287)
471 4dll_A 2-hydroxy-3-oxopropiona 89.2 0.34 1.2E-05 42.8 4.4 35 15-49 30-65 (320)
472 3g3e_A D-amino-acid oxidase; F 89.2 0.38 1.3E-05 42.9 4.8 34 141-174 2-39 (351)
473 3nyc_A D-arginine dehydrogenas 89.2 0.34 1.2E-05 43.5 4.6 35 139-176 9-43 (381)
474 1z82_A Glycerol-3-phosphate de 89.2 0.34 1.2E-05 43.1 4.4 34 15-48 13-47 (335)
475 4g65_A TRK system potassium up 89.1 0.35 1.2E-05 45.2 4.7 35 15-49 234-268 (461)
476 3pqe_A L-LDH, L-lactate dehydr 89.1 0.41 1.4E-05 42.4 4.8 33 16-48 5-40 (326)
477 3k7m_X 6-hydroxy-L-nicotine ox 89.1 0.37 1.3E-05 44.3 4.8 34 141-176 3-36 (431)
478 1zcj_A Peroxisomal bifunctiona 89.0 0.49 1.7E-05 44.3 5.6 35 15-49 36-71 (463)
479 2b9w_A Putative aminooxidase; 89.0 0.41 1.4E-05 44.0 5.0 36 139-176 6-42 (424)
480 3d0o_A L-LDH 1, L-lactate dehy 89.0 0.41 1.4E-05 42.3 4.7 34 15-48 5-41 (317)
481 3orq_A N5-carboxyaminoimidazol 89.0 0.53 1.8E-05 42.7 5.6 35 15-49 11-46 (377)
482 3lov_A Protoporphyrinogen oxid 88.9 0.47 1.6E-05 44.3 5.5 35 140-174 5-39 (475)
483 3dme_A Conserved exported prot 88.8 0.42 1.5E-05 42.6 4.9 33 140-174 5-37 (369)
484 2oln_A NIKD protein; flavoprot 88.8 0.43 1.5E-05 43.4 4.9 34 140-175 5-38 (397)
485 2i6t_A Ubiquitin-conjugating e 88.8 0.4 1.4E-05 42.0 4.5 33 16-48 14-49 (303)
486 3pef_A 6-phosphogluconate dehy 88.7 0.37 1.3E-05 41.8 4.3 33 17-49 2-35 (287)
487 1vg0_A RAB proteins geranylger 88.7 0.6 2E-05 45.4 6.0 45 12-56 4-49 (650)
488 2egg_A AROE, shikimate 5-dehyd 88.7 0.45 1.5E-05 41.6 4.7 34 15-48 140-175 (297)
489 4a7p_A UDP-glucose dehydrogena 88.6 0.4 1.4E-05 44.5 4.6 34 16-49 8-42 (446)
490 2h78_A Hibadh, 3-hydroxyisobut 88.6 0.35 1.2E-05 42.3 4.0 33 16-48 3-36 (302)
491 2e1m_A L-glutamate oxidase; L- 88.5 0.54 1.9E-05 42.6 5.3 62 138-201 43-131 (376)
492 3gvp_A Adenosylhomocysteinase 88.5 0.39 1.3E-05 44.0 4.3 36 13-48 217-253 (435)
493 3ond_A Adenosylhomocysteinase; 88.4 0.38 1.3E-05 44.9 4.3 35 14-48 263-298 (488)
494 1ryi_A Glycine oxidase; flavop 88.4 0.45 1.5E-05 42.9 4.7 34 139-174 17-50 (382)
495 1ur5_A Malate dehydrogenase; o 88.4 0.47 1.6E-05 41.7 4.7 32 17-48 3-36 (309)
496 1ldn_A L-lactate dehydrogenase 88.4 0.52 1.8E-05 41.6 5.0 34 15-48 5-41 (316)
497 3cgv_A Geranylgeranyl reductas 88.3 0.47 1.6E-05 43.0 4.9 35 140-176 5-39 (397)
498 1mv8_A GMD, GDP-mannose 6-dehy 88.2 0.35 1.2E-05 44.8 4.0 32 18-49 2-34 (436)
499 1b37_A Protein (polyamine oxid 88.2 0.34 1.2E-05 45.3 3.9 52 183-234 207-268 (472)
500 2rir_A Dipicolinate synthase, 88.2 0.45 1.5E-05 41.6 4.5 34 15-48 156-190 (300)
No 1
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2.7e-46 Score=353.67 Aligned_cols=337 Identities=19% Similarity=0.277 Sum_probs=254.0
Q ss_pred CcEEEECCChHHHHHHHHhhc-C--CcEEEEcCCCceeeeccceeeeeccccccc-c-e-eeccccc--CceeEEE-eEE
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS-F--ADVVLIDEKEYFEITWASLRAVVEPSFAVR-S-V-INHGDYL--SNVKIVV-STA 87 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~-g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~--~~~~~~~-~~~ 87 (368)
++||||||||||++||.+|++ | .+|+|||+++...+....+........... . + ....+++ .++++.. .++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 80 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEV 80 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeE
Confidence 479999999999999999974 4 689999999877665444332222111111 0 0 1111111 1566644 467
Q ss_pred EEeecc--EEEec-----CCeEEEecEEEEecCCCCCCCCchHH------HHHHHHHHHHH--HhcCCeEEEEcCchhHH
Q 017664 88 VSITDT--EVVTA-----GGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEK--VKSANSVLIVGGGPTGV 152 (368)
Q Consensus 88 ~~~~~~--~v~~~-----~g~~~~~d~lvlAtG~~~~~p~~~~~------~~~~~~~~~~~--~~~~~~v~VvG~g~~~~ 152 (368)
+.++.. .+... ++..+.||+||||||++|..|+++.. .+.++...... ...+++++|+|+|++|+
T Consensus 81 ~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~ 160 (437)
T 4eqs_A 81 IAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSL 160 (437)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHH
T ss_pred EEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchh
Confidence 777753 33322 23468999999999999888876532 33444333332 23478999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEcc
Q 017664 153 ELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCT 232 (368)
Q Consensus 153 e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~ 232 (368)
|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.++++||++++++.|.+++.+ .+.+.+|+++++|.+++++
T Consensus 161 E~A~~l~~--~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~--~v~~~~g~~~~~D~vl~a~ 236 (437)
T 4eqs_A 161 EVLENLYE--RGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGN--EITFKSGKVEHYDMIIEGV 236 (437)
T ss_dssp HHHHHHHH--HTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETT--EEEETTSCEEECSEEEECC
T ss_pred hhHHHHHh--cCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCC--eeeecCCeEEeeeeEEEEe
Confidence 99999986 4899999999999999999999999999999999999999999877543 7889999999999999999
Q ss_pred CCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHHHHHHHc
Q 017664 233 GKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 233 G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
|.+|+.+++...++ .++++|+|.||+++|| +.|||||+|||++.+. +++++.|.+||+++|+||+
T Consensus 237 G~~Pn~~~~~~~gl--~~~~~G~I~vd~~~~T-s~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~---- 309 (437)
T 4eqs_A 237 GTHPNSKFIESSNI--KLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA---- 309 (437)
T ss_dssp CEEESCGGGTTSSC--CCCTTSCEECCTTCBC-SSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH----
T ss_pred ceecCcHHHHhhhh--hhccCCcEecCCCccC-CCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc----
Confidence 99999998887766 6788999999999998 8999999999987543 2468899999999999998
Q ss_pred CCCCCCccccc-------cCCCeEEEeecCCccee------EecC----ccccCccceeeeccccchhHHHHHcCCCCC
Q 017664 305 GRNKGTMATYK-------PGYPIALVSLGRREGVA------HFPF----LTISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 305 g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~------~~~~----~~~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
|++..+...|. ..|+++.+|+++++|.. .+.+ ..+.+...+++|+ ++++++++|||+|+.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kl--i~d~~~~~ilGa~~~ 386 (437)
T 4eqs_A 310 GNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRV--YYDTSNRQILRAAAV 386 (437)
T ss_dssp SCTTCCCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEE--EEETTTCBEEEEEEE
T ss_pred CCCCcccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEE--EEECCCCEEEEEEEE
Confidence 55432222221 25788999999887742 1111 1245667789999 999999999999863
No 2
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.1e-44 Score=347.31 Aligned_cols=320 Identities=24% Similarity=0.295 Sum_probs=237.0
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeeccccc-ccceeecccc----cCceeEEE
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFA-VRSVINHGDY----LSNVKIVV 84 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~ 84 (368)
|...++++|||||||+||+++|.+|++ +++|+|||+++++.+.+... ........ .....+...+ ..++++++
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~-~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~ 115 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLP-SAPVGTVDEKSIIEPIVNFALKKKGNVTYYE 115 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGG-GTTTTSSCGGGGEEEHHHHHTTCSSCEEEEE
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchh-HHhhccccHHHhhhhHHHHHHhhcCCeEEEE
Confidence 344557899999999999999999984 89999999999876654221 11111111 1122222221 23688999
Q ss_pred eEEEEeecc--EEEe--------------------cCCeEEEecEEEEecCCCCCCCCchH--------HHHHHHHHHH-
Q 017664 85 STAVSITDT--EVVT--------------------AGGQTFVYDYVVVATGHVESVPKSRT--------ERLSQYEKDF- 133 (368)
Q Consensus 85 ~~~~~~~~~--~v~~--------------------~~g~~~~~d~lvlAtG~~~~~p~~~~--------~~~~~~~~~~- 133 (368)
+++..+|+. +|.+ .++.++.||+||||||+.|..|++++ ..+.+.....
T Consensus 116 ~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~ 195 (502)
T 4g6h_A 116 AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRR 195 (502)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHH
T ss_pred EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHH
Confidence 999999854 5543 34678999999999999965554332 1122221111
Q ss_pred ------HH----------HhcCCeEEEEcCchhHHHHHHHHhhhC------------CCCeEEEEecCcccccccCchhH
Q 017664 134 ------EK----------VKSANSVLIVGGGPTGVELAGEIAVDF------------PDKKVILVHRGPKLLEFVGSRAS 185 (368)
Q Consensus 134 ------~~----------~~~~~~v~VvG~g~~~~e~a~~l~~~~------------~~~~v~~i~~~~~~l~~~~~~~~ 185 (368)
+. .....+++|||+|++|+|+|.+|.+.. ...+|+++++.+++++.+++++.
T Consensus 196 ~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~ 275 (502)
T 4g6h_A 196 TFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLS 275 (502)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHH
T ss_pred HHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHH
Confidence 11 112358999999999999999887421 13689999999999999999999
Q ss_pred HHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCc----EEecCEEEEccCCCCCc---hhhhccccccccCCCCcE
Q 017664 186 QIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGE----TIDTDCHFMCTGKAMAS---SWLRETILKDSLDGRGRL 256 (368)
Q Consensus 186 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~----~i~~d~vi~a~G~~p~~---~~~~~~~l~~~~~~~g~i 256 (368)
+.+.+.|+++||++++++.|++++.+.. ...+.||+ ++++|.+|||+|.+|++ ++... ++...+.+|+|
T Consensus 276 ~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~--~~~~~~~~g~I 353 (502)
T 4g6h_A 276 SYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKK--IPEQNSSKRGL 353 (502)
T ss_dssp HHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHH--SGGGTTCCSSE
T ss_pred HHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHh--ccccccCCCce
Confidence 9999999999999999999998875533 34456663 69999999999999874 22222 23356778999
Q ss_pred EeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHc--------------------CCCCCCcccccc
Q 017664 257 MVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMM--------------------GRNKGTMATYKP 316 (368)
Q Consensus 257 ~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~--------------------g~~~~~~~~~~~ 316 (368)
.||++||++++|||||+|||+..+.+++++.|.+||+++|+||.+..+ ++ ++.+|..
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~pF~y 430 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEEN---NFKPFKY 430 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHT---TCCCCCC
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCC---CCCCCEe
Confidence 999999999999999999999988889999999999999999977432 23 2345555
Q ss_pred CCCeEEEeecCCcceeEecC
Q 017664 317 GYPIALVSLGRREGVAHFPF 336 (368)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~ 336 (368)
.....++++|...|++++..
T Consensus 431 ~~~G~~a~lG~~~av~~~~~ 450 (502)
T 4g6h_A 431 NDLGALAYLGSERAIATIRS 450 (502)
T ss_dssp CCCEEEEECSTTCEEEEEEE
T ss_pred cCcceEEEEeCCceEEEccC
Confidence 56778899999999988754
No 3
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=3.4e-45 Score=351.44 Aligned_cols=345 Identities=21% Similarity=0.232 Sum_probs=254.3
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhhc--CCcEEEEc--------CCCceeeeccce---e---------------e----
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQS--FADVVLID--------EKEYFEITWASL---R---------------A---- 59 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie--------~~~~~~~~~~~~---~---------------~---- 59 (368)
.|++++||+||||||||+++|.+|++ |++|+||| +.+.+|+.+... . .
T Consensus 3 ~M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~ 82 (495)
T 2wpf_A 3 HMSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGF 82 (495)
T ss_dssp CCCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhc
Confidence 35557899999999999999999864 99999999 244454432110 0 0
Q ss_pred eec---c--cccccceee------------cccc--cC-ceeEEEeEEEEeeccEEEec---C-----CeEEEecEEEEe
Q 017664 60 VVE---P--SFAVRSVIN------------HGDY--LS-NVKIVVSTAVSITDTEVVTA---G-----GQTFVYDYVVVA 111 (368)
Q Consensus 60 ~~~---~--~~~~~~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~v~~~---~-----g~~~~~d~lvlA 111 (368)
... . .+....+.. .... .. +++++.+.+..++++++.+. + ++.++||+||||
T Consensus 83 g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViA 162 (495)
T 2wpf_A 83 GWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLA 162 (495)
T ss_dssp TEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEEC
T ss_pred CcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEe
Confidence 000 0 000000000 0001 12 68889998888988888775 4 678999999999
Q ss_pred cCCCCCCCCchHH-HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCcccccccCchhHHHHH
Q 017664 112 TGHVESVPKSRTE-RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFP-DKKVILVHRGPKLLEFVGSRASQIAL 189 (368)
Q Consensus 112 tG~~~~~p~~~~~-~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~-~~~v~~i~~~~~~l~~~~~~~~~~~~ 189 (368)
||+.|..|++++. .+.+..........+++++|||+|++|+|+|..+.+.++ +.+|+++++.+++++.+++++...+.
T Consensus 163 TGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~ 242 (495)
T 2wpf_A 163 TGSWPQMPAIPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVT 242 (495)
T ss_dssp CCEEECCCCCTTGGGCEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHH
T ss_pred CCCCcCCCCCCCccccccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHH
Confidence 9999777765432 122222222222347899999999999999999986433 88999999999999999999999999
Q ss_pred HHHHcCCcEEEecceeeecccCC-C--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecC
Q 017664 190 DWLTSKKVEVILNQSVTLNTISD-G--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRG 266 (368)
Q Consensus 190 ~~l~~~gv~i~~~~~v~~i~~~~-~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~ 266 (368)
+.++++||++++++.|.+++.++ + .+.+.+|+++++|.||+|+|++|+.+++....+++.++++|+|.||+++|| +
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~ 321 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRT-N 321 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCCTTCBC-S
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEECCCCcc-C
Confidence 99999999999999999998654 2 678889989999999999999999885433334447788899999999998 8
Q ss_pred CCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCcceeE------
Q 017664 267 FKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVAH------ 333 (368)
Q Consensus 267 ~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~------ 333 (368)
.|||||+|||++.+ ++++.|.+||+.||+||. |+.... ..|. ..++++.+|+++.++...
T Consensus 322 ~~~IyA~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~~~-~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~~~~~v 394 (495)
T 2wpf_A 322 VPNIYAIGDITDRL--MLTPVAINEGAALVDTVF----GNKPRK-TDHTRVASAVFSIPPIGTCGLIEEVAAKEFEKVAV 394 (495)
T ss_dssp STTEEECGGGGCSC--CCHHHHHHHHHHHHHHHH----SSCCCC-CCCSSCEEEECCSSCEEEEECCHHHHHHHSSEEEE
T ss_pred CCCEEEEeccCCCc--cCHHHHHHHHHHHHHHhc----CCCCCc-CCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEE
Confidence 99999999999753 478999999999999997 322111 1111 257889999988766432
Q ss_pred --ecCcc----c-cCcccee-eeccccchhHHHHHcCCCCC
Q 017664 334 --FPFLT----I-SGRIPGW-IKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 334 --~~~~~----~-~~~~~~~-~k~~~~~~~~~~~~lG~~~~ 366 (368)
+++.. + .+...++ +|+ ++++++++|||+|+.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~kl--v~~~~~~~ilG~~~~ 433 (495)
T 2wpf_A 395 YMSSFTPLMHNISGSKYKKFVAKI--VTNHSDGTVLGVHLL 433 (495)
T ss_dssp EEEEECCTHHHHHSCTTCCEEEEE--EEETTTCBEEEEEEE
T ss_pred EEEecCchhhhhhcCCCcEEEEEE--EEECCCCEEEEEEEE
Confidence 11211 1 2345688 998 999999999999863
No 4
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=3.1e-45 Score=348.17 Aligned_cols=340 Identities=20% Similarity=0.257 Sum_probs=251.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccce---e-----------eeec---c---------cc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASL---R-----------AVVE---P---------SF 65 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~---~-----------~~~~---~---------~~ 65 (368)
|++++||+|||||+||+++|.+|++ |++|+|||+++ +|+.+... . .... . .+
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 3456899999999999999999984 99999999984 44332100 0 0000 0 00
Q ss_pred cccceee------------cccc--cCceeEEEeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCCchHH-HHHHHH
Q 017664 66 AVRSVIN------------HGDY--LSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE-RLSQYE 130 (368)
Q Consensus 66 ~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~-~~~~~~ 130 (368)
....+.. .... ..+++++.+.+..++++++.+ +++.+.||+||+|||+.|..|++++. .+.+..
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~ 158 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEV-NGETITADHILIATGGRPSHPDIPGVEYGIDSD 158 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEE-TTEEEEEEEEEECCCEEECCCCSTTGGGSBCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEE-CCEEEEeCEEEECCCCCCCCCCCCCccceecHH
Confidence 0000000 0000 126888888888888888877 77889999999999999777765432 222233
Q ss_pred HHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeeccc
Q 017664 131 KDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTI 210 (368)
Q Consensus 131 ~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 210 (368)
........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.
T Consensus 159 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~ 236 (450)
T 1ges_A 159 GFFALPALPERVAVVGAGYIGVELGGVING--LGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVK 236 (450)
T ss_dssp HHHHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEE
T ss_pred HhhhhhhcCCeEEEECCCHHHHHHHHHHHh--cCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 333323357899999999999999999985 488999999999999889999999999999999999999999999886
Q ss_pred CC-C--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHH
Q 017664 211 SD-G--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYL 287 (368)
Q Consensus 211 ~~-~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~ 287 (368)
++ + .+.+.+|+++++|.||+|+|++|+.+++....+++.++++|+|.||+++|| +.|||||+|||++.+ .+++.
T Consensus 237 ~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~--~~~~~ 313 (450)
T 1ges_A 237 NTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTGAV--ELTPV 313 (450)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGTSC--CCHHH
T ss_pred eCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCCCC--ccHHH
Confidence 54 3 678889989999999999999999875422223346788899999999998 899999999998754 37889
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCC-c-------cccccCCCeEEEeecCCcceeEec---Cc------------cccCccc
Q 017664 288 AQKHALVTAKNLKKLMMGRNKGT-M-------ATYKPGYPIALVSLGRREGVAHFP---FL------------TISGRIP 344 (368)
Q Consensus 288 a~~~g~~aa~~i~~~l~g~~~~~-~-------~~~~~~~~~~~~~~g~~~~~~~~~---~~------------~~~~~~~ 344 (368)
|.+||+.+|+||.. +.... . ..| ..|+++.+|+++.++..+.. +. ...+...
T Consensus 314 A~~~g~~aa~~i~~----~~~~~~~~~~~~p~~~~-~~~~~a~vG~~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 388 (450)
T 1ges_A 314 AVAAGRRLSERLFN----NKPDEHLDYSNIPTVVF-SHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQP 388 (450)
T ss_dssp HHHHHHHHHHHHHT----TCTTCCCCCSSCCEEEC-CSSCEEEEECCHHHHHHHHCGGGEEEEEEEEECHHHHTSSSCCE
T ss_pred HHHHHHHHHHHHcC----CCCcccCCCCCCCeEEE-CCCceEEEeCCHHHHHhcCCCCcEEEEEEECchhhHHHhcCCCc
Confidence 99999999999983 22111 0 112 24788999998777654311 10 1245567
Q ss_pred eeeeccccchhHHHHHcCCCCC
Q 017664 345 GWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 345 ~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
+++|+ ++++++++|||+|+.
T Consensus 389 ~~~k~--~~~~~~~~ilG~~~~ 408 (450)
T 1ges_A 389 CRMKL--VCVGSEEKIVGIHGI 408 (450)
T ss_dssp EEEEE--EEETTTTEEEEEEEE
T ss_pred EEEEE--EEECCCCEEEEEEEE
Confidence 89998 999999999999863
No 5
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.1e-44 Score=343.43 Aligned_cols=340 Identities=20% Similarity=0.221 Sum_probs=249.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce------------------eee----ec---cccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL------------------RAV----VE---PSFA 66 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~------------------~~~----~~---~~~~ 66 (368)
|++++||+|||||+||+++|.+|+ .|++|+|||+++ +|+.+... ... .. ....
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 345789999999999999999997 599999999984 44332110 000 00 0000
Q ss_pred ccceee------------cccc--cCceeEEEeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCCchHH-HHHHHHH
Q 017664 67 VRSVIN------------HGDY--LSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE-RLSQYEK 131 (368)
Q Consensus 67 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~-~~~~~~~ 131 (368)
...+.. .... ..+++++.+.+..++.+++.+ ++..+.||+||+|||+.|..|++++. .+.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~ 158 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPIVPRLPGAELGITSDG 158 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEECCCSCTTGGGSBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCCCCCCCCccceecHHH
Confidence 000000 0000 126888888888888888877 77889999999999999777665432 1222333
Q ss_pred HHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccC
Q 017664 132 DFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTIS 211 (368)
Q Consensus 132 ~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 211 (368)
.......+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+
T Consensus 159 ~~~~~~~~~~vvVvGgG~~g~e~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 159 FFALQQQPKRVAIIGAGYIGIELAGLLRS--FGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERD 236 (463)
T ss_dssp HHHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEE
T ss_pred HhhhhccCCEEEEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 33323347899999999999999999985 4889999999999988889999999999999999999999999998765
Q ss_pred CC--eEEcCCCc-EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHH
Q 017664 212 DG--LIETSSGE-TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLA 288 (368)
Q Consensus 212 ~~--~v~~~~g~-~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a 288 (368)
++ .+.+.+|+ ++++|.+|+|+|++|+.+++....+++.++++|+|.||+++|| +.|||||+|||++.+ .+++.|
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~~~A 313 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITGRD--QLTPVA 313 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGTSC--CCHHHH
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCCCc--ccHHHH
Confidence 43 67888998 8999999999999999875422223346788899999999998 899999999998754 378899
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCcceeEe---------cCc-----cccCccceee
Q 017664 289 QKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVAHF---------PFL-----TISGRIPGWI 347 (368)
Q Consensus 289 ~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~---------~~~-----~~~~~~~~~~ 347 (368)
.+||+.+|.||. |+.......|. ..++++.+|+++.++..++ ++. ...+...+++
T Consensus 314 ~~~g~~aa~~i~----g~~~~~~~~~~~~p~~~~~~~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (463)
T 2r9z_A 314 IAAGRRLAERLF----DGQSERKLDYDNIPTVVFAHPPLSKVGLSEPEARERLGDVLTVYETSFTPMRYALNEHGPKTAM 389 (463)
T ss_dssp HHHHHHHHHHHH----SCCTTCCCCCSSCCEEECCSSCEEEEECCHHHHHHHHCSCEEEEEEEECCGGGTTSSSCCCEEE
T ss_pred HHHHHHHHHHHc----CCCCcccCCCCCCCEEEeCCCCeEEEcCCHHHHHhcCCCCEEEEEEEcccchhhhhcCCCcEEE
Confidence 999999999997 33211101111 2467888998876654321 111 1244557899
Q ss_pred eccccchhHHHHHcCCCC
Q 017664 348 KSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 348 k~~~~~~~~~~~~lG~~~ 365 (368)
|+ ++++++++|||+|+
T Consensus 390 kl--v~~~~~~~ilG~~~ 405 (463)
T 2r9z_A 390 KL--VCAGPEQRVVGVHV 405 (463)
T ss_dssp EE--EEETTTTEEEEEEE
T ss_pred EE--EEECCCCEEEEEEE
Confidence 98 99999999999986
No 6
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.2e-45 Score=348.82 Aligned_cols=343 Identities=22% Similarity=0.291 Sum_probs=250.2
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceee-------------------eec-------cc
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRA-------------------VVE-------PS 64 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~-------------------~~~-------~~ 64 (368)
++++++||+||||||||++||..|+ .|++|+|||+++.+|+.|..... ... ..
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 3445689999999999999999998 59999999998877654321100 000 00
Q ss_pred ccccceeec------------ccc--cCceeEEEeEEEEeeccE--EEecCC--eEEEecEEEEecCCCC-CCCCch---
Q 017664 65 FAVRSVINH------------GDY--LSNVKIVVSTAVSITDTE--VVTAGG--QTFVYDYVVVATGHVE-SVPKSR--- 122 (368)
Q Consensus 65 ~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lvlAtG~~~-~~p~~~--- 122 (368)
+....+... ..+ ..+++++.+.+..++++. +.+.+| ..+.||+||||||+.| .+|+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~~ipg~~~~~ 180 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVAGIPGVEVAF 180 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECCCBTTBCCCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCCCCCCccccc
Confidence 000000000 000 126788888888888774 444455 5799999999999985 345442
Q ss_pred -HHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEe
Q 017664 123 -TERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVIL 201 (368)
Q Consensus 123 -~~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~ 201 (368)
...+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 181 DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWAR--LGAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 22233333333333458999999999999999999986 488999999999999999999999999999999999999
Q ss_pred cceeeecccCCC--eEEcCC---C--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEec
Q 017664 202 NQSVTLNTISDG--LIETSS---G--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIG 274 (368)
Q Consensus 202 ~~~v~~i~~~~~--~v~~~~---g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~G 274 (368)
++.+.+++.+++ .+.+.+ | +++++|.||+|+|++|+.+++.....++.++++|++.||+++|| +.|+|||+|
T Consensus 259 ~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~G 337 (491)
T 3urh_A 259 GAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIG 337 (491)
T ss_dssp SEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECG
T ss_pred CCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEE
Confidence 999999887655 344432 4 68999999999999999987433334447788999999999998 899999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------ccccccCCCeEEEeecCCccee--------EecCc---
Q 017664 275 DITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGT------MATYKPGYPIALVSLGRREGVA--------HFPFL--- 337 (368)
Q Consensus 275 D~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~------~~~~~~~~~~~~~~~g~~~~~~--------~~~~~--- 337 (368)
||++.| ++++.|..||+.+|+||+ |+.... ...| ..|+++.+|+.+.++.. .+++.
T Consensus 338 D~~~~~--~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~ 410 (491)
T 3urh_A 338 DVVRGP--MLAHKAEDEGVAVAEIIA----GQAGHVNYDVIPGVVY-TQPEVASVGKTEEELKAAGVAYKIGKFPFTANG 410 (491)
T ss_dssp GGSSSC--CCHHHHHHHHHHHHHHHT----TSCCCCCTTCCCEEEC-SSSCEEEEECCHHHHHHTTCCEEEEEEEGGGCH
T ss_pred ecCCCc--cchhHHHHHHHHHHHHHc----CCCcccCCCCCCEEEE-ccCCeEEEeCCHHHHHhCCCCEEEEEEecCcch
Confidence 999765 488999999999999998 332110 0112 25789999998876642 22221
Q ss_pred --cccCccceeeeccccchhHHHHHcCCCCC
Q 017664 338 --TISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 338 --~~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
.+.+...+++|+ ++++++++|||+|+.
T Consensus 411 ~~~~~~~~~g~~k~--i~~~~~~~ilG~~~~ 439 (491)
T 3urh_A 411 RARAMLQTDGFVKI--LADKETDRVLGGHII 439 (491)
T ss_dssp HHHHTTCCCCEEEE--EEETTTCBEEEEEEE
T ss_pred hhhcCCCCcEEEEE--EEECCCCEEEEEEEE
Confidence 134566799999 999999999999863
No 7
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.3e-44 Score=347.36 Aligned_cols=341 Identities=17% Similarity=0.159 Sum_probs=254.8
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccc------------------eeeeec-------ccccccc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWAS------------------LRAVVE-------PSFAVRS 69 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~------------------~~~~~~-------~~~~~~~ 69 (368)
++||+||||||||++||.+|++ |++|+|||+++ +|+.+.. ...... .......
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 5899999999999999999985 99999999986 4432100 000000 0000000
Q ss_pred eeec---------------ccccCceeEEEeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCCchH---HHHHHHHH
Q 017664 70 VINH---------------GDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRT---ERLSQYEK 131 (368)
Q Consensus 70 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~---~~~~~~~~ 131 (368)
+..+ ......++++.+.+...+.+++.+.++..+.||+||||||++|..|++.. ..+.+...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~~~ 166 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDN 166 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCEECCCCHHHHTTGGGEECHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCCCCcCCCCCCccCCcEEcHHH
Confidence 0000 00112446778888888889999888899999999999999999887432 22333333
Q ss_pred HHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccC
Q 017664 132 DFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTIS 211 (368)
Q Consensus 132 ~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 211 (368)
.......+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++. |++++++.+.+++.+
T Consensus 167 ~~~~~~~~k~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~ 243 (492)
T 3ic9_A 167 LFELNDLPKSVAVFGPGVIGLELGQALSR--LGVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEK 243 (492)
T ss_dssp HTTCSSCCSEEEEESSCHHHHHHHHHHHH--TTCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEEC
T ss_pred HhhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEc
Confidence 33333457999999999999999999985 588999999999999999999999999999998 999999999999876
Q ss_pred CC--eEEcC--CC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeC-CCeeecCCCCeEEecccCCCCccch
Q 017664 212 DG--LIETS--SG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVD-ENLRVRGFKNVFAIGDITDIPEIKQ 284 (368)
Q Consensus 212 ~~--~v~~~--~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd-~~~~~~~~~~ifa~GD~~~~~~~~~ 284 (368)
++ .+.+. +| +++++|.||+|+|++|+.+++....+++.++++|++.|| +++|| +.|+|||+|||++.+. +
T Consensus 244 ~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~~~~--~ 320 (492)
T 3ic9_A 244 EDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANNTLT--L 320 (492)
T ss_dssp SSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGTSSC--S
T ss_pred CCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCCCCc--c
Confidence 55 45443 67 689999999999999999885444445578889999999 89999 8999999999998654 7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC--C--CCccccccCCCeEEEeecCCcceeEe------cC-------c-----cccCc
Q 017664 285 GYLAQKHALVTAKNLKKLMMGRN--K--GTMATYKPGYPIALVSLGRREGVAHF------PF-------L-----TISGR 342 (368)
Q Consensus 285 ~~~a~~~g~~aa~~i~~~l~g~~--~--~~~~~~~~~~~~~~~~~g~~~~~~~~------~~-------~-----~~~~~ 342 (368)
++.|.+||+.||+||........ . .+...| ..|+++.+|+++++|...+ .+ . .+.+.
T Consensus 321 ~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~ 399 (492)
T 3ic9_A 321 LHEAADDGKVAGTNAGAYPVIAQGQRRAPLSVVF-TEPQVASVGLSLRQIEDLYADQDAANYVVGQVSFEGQGRSRVMGK 399 (492)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCCEEEEC-SSSEEEEEESCHHHHHHHCSCSSSCCEEEEEEEGGGCHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccCCCCCcEEEE-CCCCeEEecCCHHHHHhccCccCCccEEEEEEEeccchhhhhcCC
Confidence 88999999999999986321111 0 011122 2578999999988766442 11 1 13456
Q ss_pred cceeeeccccchhHHHHHcCCCCC
Q 017664 343 IPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 343 ~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
..+++|+ ++++++++|||+|+.
T Consensus 400 ~~g~~kl--i~~~~~~~ilG~~~~ 421 (492)
T 3ic9_A 400 NKGLLNV--YADRTSGEFLGAEMF 421 (492)
T ss_dssp CCCEEEE--EEETTTCBEEEEEEE
T ss_pred CcEEEEE--EEECCCCEEEEEEEE
Confidence 6799999 999999999999863
No 8
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=8.2e-44 Score=338.74 Aligned_cols=336 Identities=20% Similarity=0.216 Sum_probs=244.3
Q ss_pred CcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeeccccc--ccceeeccccc--CceeEE-EeEEE
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFA--VRSVINHGDYL--SNVKIV-VSTAV 88 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~~~~ 88 (368)
+||+|||||+||++||.+|++ +.+|+|||+++.+++....+......... ........+++ .++++. ..++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 699999999999999999973 89999999999888655444333222111 11111111111 255553 45677
Q ss_pred Eeecc--EEEe---cCCeEEEecEEEEecCCCCCCCCchHH---H------HHHHHHHHHHHhcCCeEEEEcCchhHHHH
Q 017664 89 SITDT--EVVT---AGGQTFVYDYVVVATGHVESVPKSRTE---R------LSQYEKDFEKVKSANSVLIVGGGPTGVEL 154 (368)
Q Consensus 89 ~~~~~--~v~~---~~g~~~~~d~lvlAtG~~~~~p~~~~~---~------~~~~~~~~~~~~~~~~v~VvG~g~~~~e~ 154 (368)
.++.. .+.. .++..+.||++|+|||+.|..|+++.. . +.+.....+....+++++|||+|++|+|+
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~ 162 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEA 162 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHH
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHH
Confidence 77643 4443 256689999999999999776654321 1 12223333345568999999999999999
Q ss_pred HHHHhhhCCCCeEEEEecCcccccc-cCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEc
Q 017664 155 AGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMC 231 (368)
Q Consensus 155 a~~l~~~~~~~~v~~i~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a 231 (368)
|..+.+ .+.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|++++..++ .+.++++ ++++|.||+|
T Consensus 163 A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A 239 (452)
T 3oc4_A 163 IDFLVK--MKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFA 239 (452)
T ss_dssp HHHHHH--TTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEEC
T ss_pred HHHHHh--CCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEEC
Confidence 999985 58999999999999885 8999999999999999999999999999985544 4777777 8999999999
Q ss_pred cCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHHHHHHH
Q 017664 232 TGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKNLKKLM 303 (368)
Q Consensus 232 ~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~i~~~l 303 (368)
+|++|+.+++... +.++++|++.||+++|| +.|||||+|||++.+. +++++.|.+||+.||+||.
T Consensus 240 ~G~~p~~~~l~~~---~~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~--- 312 (452)
T 3oc4_A 240 LNLHPQLAYLDKK---IQRNLDQTIAVDAYLQT-SVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE--- 312 (452)
T ss_dssp SCCBCCCSSCCTT---SCBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS---
T ss_pred cCCCCChHHHHhh---hccCCCCCEEECcCccC-CCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc---
Confidence 9999999877543 36788999999999999 8999999999998642 2478899999999999997
Q ss_pred cCCCCCCc--cccc----cCCCeEEEeecCCcceeE--------ecCc--cccCccceeeeccccchhHHHHHcCCCC
Q 017664 304 MGRNKGTM--ATYK----PGYPIALVSLGRREGVAH--------FPFL--TISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 304 ~g~~~~~~--~~~~----~~~~~~~~~~g~~~~~~~--------~~~~--~~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
|...... .... ..++++.+|+++.+|... +.+. .+.+...+++|+ ++++++++|||+|+
T Consensus 313 -g~~~~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~ 387 (452)
T 3oc4_A 313 -EKTHRFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKL--IYDKVTQRVLGAQL 387 (452)
T ss_dssp -SCCCCCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEE--EEETTTCBEEEEEE
T ss_pred -CCCccCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEE--EEECCCCEEEEEEE
Confidence 3321110 1111 135788888888776421 1111 134556789999 99999999999986
No 9
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.8e-44 Score=342.10 Aligned_cols=338 Identities=20% Similarity=0.201 Sum_probs=254.2
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccce------------------eee-------eccccccc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASL------------------RAV-------VEPSFAVR 68 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~------------------~~~-------~~~~~~~~ 68 (368)
.++||+||||||+|+++|..|++ |++|+|||++ .+|+.+... ... ....+...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF-RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 36899999999999999999984 9999999994 444322100 000 00000000
Q ss_pred cee--------e----ccccc--CceeEEEeEEEEeeccEEEe-cCCeEEEecEEEEecCCCCC-CCCchHHH-HHHHHH
Q 017664 69 SVI--------N----HGDYL--SNVKIVVSTAVSITDTEVVT-AGGQTFVYDYVVVATGHVES-VPKSRTER-LSQYEK 131 (368)
Q Consensus 69 ~~~--------~----~~~~~--~~~~~~~~~~~~~~~~~v~~-~~g~~~~~d~lvlAtG~~~~-~p~~~~~~-~~~~~~ 131 (368)
.+. . ...++ .+++++...+..++++.+.+ .++..+.||++|+|||+.|. .|++++.. +.+...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~ 162 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCITSNE 162 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEECCCTTSTTGGGCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcccCCCCCCccccccHHH
Confidence 000 0 00111 26788888888888888887 57889999999999999988 77665322 222222
Q ss_pred HHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccC
Q 017664 132 DFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTIS 211 (368)
Q Consensus 132 ~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~ 211 (368)
.......+++++|+|+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+
T Consensus 163 ~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~ 240 (463)
T 4dna_A 163 AFDLPALPESILIAGGGYIAVEFANIFHG--LGVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSAD 240 (463)
T ss_dssp HTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEC
T ss_pred HhhhhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEc
Confidence 22222347899999999999999999985 5889999999999999999999999999999999999999999999876
Q ss_pred CC---eEE-cCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHH
Q 017664 212 DG---LIE-TSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYL 287 (368)
Q Consensus 212 ~~---~v~-~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~ 287 (368)
++ .+. +.+|+ +++|.||+|+|++|+.+++....+++.++++|++.||+++|| +.|||||+|||++.+ ++++.
T Consensus 241 ~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~--~~~~~ 316 (463)
T 4dna_A 241 ADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTDRV--QLTPV 316 (463)
T ss_dssp TTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGSSC--CCHHH
T ss_pred CCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCCCC--CChHH
Confidence 43 577 88997 999999999999999887543344457788999999999997 899999999999854 47899
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCc-------cccccCCCeEEEeecCCcceeE--------ecCc-----cccCccceee
Q 017664 288 AQKHALVTAKNLKKLMMGRNKGTM-------ATYKPGYPIALVSLGRREGVAH--------FPFL-----TISGRIPGWI 347 (368)
Q Consensus 288 a~~~g~~aa~~i~~~l~g~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~--------~~~~-----~~~~~~~~~~ 347 (368)
|.+||+.+|+||+ |...... ..| ..|+++.+|+++++|... +++. ...+...+++
T Consensus 317 A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~-~~p~~a~vG~te~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (463)
T 4dna_A 317 AIHEAMCFIETEY----KNNPTSPDHDLIATAVF-SQPEIGTVGITEEEAARKFQEIEVYRAEFRPMKATLSGRKEKTIM 391 (463)
T ss_dssp HHHHHHHHHHHHH----SSCCCCCCCSCCCEEEC-SSSCEEEEECCHHHHHHHSSEEEEEEEEECCTTHHHHCCCCCEEE
T ss_pred HHHHHHHHHHHHc----CCCCcccCCCCCCEEEE-CCCCeEEecCCHHHHHHcCCCeEEEEEeccccchhhcCCCceEEE
Confidence 9999999999998 3321110 112 247899999988876432 2221 1356678999
Q ss_pred eccccchhHHHHHcCCCCC
Q 017664 348 KSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 348 k~~~~~~~~~~~~lG~~~~ 366 (368)
|+ ++++++++|||+|+.
T Consensus 392 k~--~~~~~~~~ilG~~~~ 408 (463)
T 4dna_A 392 KL--VVNAADRKVVGAHIL 408 (463)
T ss_dssp EE--EEETTTCBEEEEEEE
T ss_pred EE--EEECCCCEEEEEEEE
Confidence 99 999999999999863
No 10
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-44 Score=342.21 Aligned_cols=343 Identities=18% Similarity=0.197 Sum_probs=249.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce---e-----------eee--------c-------
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL---R-----------AVV--------E------- 62 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~---~-----------~~~--------~------- 62 (368)
+++++||+||||||||+++|.+|+ .|.+|+|||+++ +|+.+... . ... .
T Consensus 8 ~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 8 NTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 345789999999999999999997 599999999985 44332100 0 000 0
Q ss_pred --ccccccceee------------cccc--cCceeEEEeEEEEeeccE--EEecCCe--EEEecEEEEecCCCCCCC-Cc
Q 017664 63 --PSFAVRSVIN------------HGDY--LSNVKIVVSTAVSITDTE--VVTAGGQ--TFVYDYVVVATGHVESVP-KS 121 (368)
Q Consensus 63 --~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~--v~~~~g~--~~~~d~lvlAtG~~~~~p-~~ 121 (368)
..+....+.. .... ..+++++...+..++++. +.+.+++ .+.||+||+|||+.|..| ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i 166 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENI 166 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTS
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCC
Confidence 0000000000 0001 136888888888887764 4445665 799999999999997777 55
Q ss_pred hHH-HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEE
Q 017664 122 RTE-RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVI 200 (368)
Q Consensus 122 ~~~-~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~ 200 (368)
+.. ...+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 167 ~g~~~~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~ 244 (479)
T 2hqm_A 167 PGFELGTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHG--LGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVH 244 (479)
T ss_dssp TTGGGSBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred CCcccccchHHHhcccccCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEE
Confidence 432 111222333323457999999999999999999985 48899999999999999999999999999999999999
Q ss_pred ecceeeecccCC-C---eEEcCCC-cEEecCEEEEccCCCCCchh-hhccccccccCCCCcEEeCCCeeecCCCCeEEec
Q 017664 201 LNQSVTLNTISD-G---LIETSSG-ETIDTDCHFMCTGKAMASSW-LRETILKDSLDGRGRLMVDENLRVRGFKNVFAIG 274 (368)
Q Consensus 201 ~~~~v~~i~~~~-~---~v~~~~g-~~i~~d~vi~a~G~~p~~~~-~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~G 274 (368)
+++.|.+++.++ + .+.+.+| +++++|.||+|+|++|+..+ +...++ .++++|+|.||+++|| +.|||||+|
T Consensus 245 ~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~G 321 (479)
T 2hqm_A 245 KLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGI--KLNSHDQIIADEYQNT-NVPNIYSLG 321 (479)
T ss_dssp CSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTC--CBCTTSCBCCCTTCBC-SSTTEEECG
T ss_pred eCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCc--eECCCCCEeECCCCcc-CCCCEEEEE
Confidence 999999987643 2 5778888 78999999999999999855 455444 6788899999999998 899999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHH---cCCC-C--CCccccccCCCeEEEeecCCcceeEe----------cCc-
Q 017664 275 DITDIPEIKQGYLAQKHALVTAKNLKKLM---MGRN-K--GTMATYKPGYPIALVSLGRREGVAHF----------PFL- 337 (368)
Q Consensus 275 D~~~~~~~~~~~~a~~~g~~aa~~i~~~l---~g~~-~--~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~- 337 (368)
||++.+ .+++.|.+||+.+|+||.... .+.. . .+...|+ .|+++.+|+++.++..+. ++.
T Consensus 322 D~~~~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~-~~~~~~vGl~e~~a~~~~~~~~~~~~~~~~~~ 398 (479)
T 2hqm_A 322 DVVGKV--ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFS-HPEAGSIGISEKEAIEKYGKENIKVYNSKFTA 398 (479)
T ss_dssp GGTTSS--CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECC-SSCEEEEECCHHHHHHHHCGGGEEEEEEEECC
T ss_pred ecCCCc--ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEEC-CCCeEEEeCCHHHHHhcCCCCcEEEEEEeccH
Confidence 998754 378899999999999998321 1100 0 0111232 477899999887664321 111
Q ss_pred ----cccCccceeeeccccchhHHHHHcCCCCC
Q 017664 338 ----TISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 338 ----~~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
...+...+++|+ ++++++++|||+|+.
T Consensus 399 ~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~ 429 (479)
T 2hqm_A 399 MYYAMLSEKSPTRYKI--VCAGPNEKVVGLHIV 429 (479)
T ss_dssp GGGGGCSSCCCEEEEE--EEETTTTEEEEEEEE
T ss_pred HHHHhhcCCCcEEEEE--EEECCCCEEEEEEEE
Confidence 124556789998 999999999999863
No 11
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-43 Score=336.05 Aligned_cols=338 Identities=20% Similarity=0.298 Sum_probs=245.2
Q ss_pred CCCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeeccccc-ccceeeccccc---CceeEEEe-E
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFA-VRSVINHGDYL---SNVKIVVS-T 86 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~-~ 86 (368)
+++||+|||||+||+++|..|++ +.+|+|||+++.+++....+......... ........+++ .+++++.. +
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 81 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAE 81 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCE
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCE
Confidence 35799999999999999999973 78999999999876554333332221111 11111111111 36777766 7
Q ss_pred EEEeecc--EEEecCC-eEEEecEEEEecCCCCCCCCchHH---------HHHHHHHHHHHHh--cCCeEEEEcCchhHH
Q 017664 87 AVSITDT--EVVTAGG-QTFVYDYVVVATGHVESVPKSRTE---------RLSQYEKDFEKVK--SANSVLIVGGGPTGV 152 (368)
Q Consensus 87 ~~~~~~~--~v~~~~g-~~~~~d~lvlAtG~~~~~p~~~~~---------~~~~~~~~~~~~~--~~~~v~VvG~g~~~~ 152 (368)
+..++.. .+.+.++ ..+.||+||+|||+.|..|++++. ...+.....+... .+++++|||+|++|+
T Consensus 82 v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~ 161 (449)
T 3kd9_A 82 VIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGI 161 (449)
T ss_dssp EEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHH
T ss_pred EEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHH
Confidence 7777754 5666666 479999999999998766654321 1233333333333 578999999999999
Q ss_pred HHHHHHhhhCCCCeEEEEecCcccccc-cCchhHHHHHHHHHcCCcEEEecceeeecccCCC-eEEcCCCcEEecCEEEE
Q 017664 153 ELAGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVTLNTISDG-LIETSSGETIDTDCHFM 230 (368)
Q Consensus 153 e~a~~l~~~~~~~~v~~i~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~~~g~~i~~d~vi~ 230 (368)
|+|..+.+ .+.+|+++++.+++++. +++++.+.+.+.+++. |++++++.+.+++.++. ...+.+++++++|.||+
T Consensus 162 E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~ 238 (449)
T 3kd9_A 162 EMAEAFAA--QGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVIL 238 (449)
T ss_dssp HHHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEE
T ss_pred HHHHHHHh--CCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEE
Confidence 99999985 58899999999999987 8999999999999999 99999999998876654 33455678899999999
Q ss_pred ccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHHHHHH
Q 017664 231 CTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKNLKKL 302 (368)
Q Consensus 231 a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~i~~~ 302 (368)
|+|++|+.+++...++ .++++|++.||+++|| +.|||||+|||+..+. +++++.|.+||+.+|+||.
T Consensus 239 a~G~~p~~~l~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~-- 313 (449)
T 3kd9_A 239 ATGIKPNIELAKQLGV--RIGETGAIWTNEKMQT-SVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA-- 313 (449)
T ss_dssp CSCEEECCHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT--
T ss_pred eeCCccCHHHHHhCCc--cCCCCCCEEECCCCcc-CCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc--
Confidence 9999999988776665 6788899999999999 8999999999985321 3578999999999999997
Q ss_pred HcCCCCCCcccc-------ccCCCeEEEeecCCcceeE--------ecC---c-cccCccceeeeccccchhHHHHHcCC
Q 017664 303 MMGRNKGTMATY-------KPGYPIALVSLGRREGVAH--------FPF---L-TISGRIPGWIKSRDLFVGKTRKQLGL 363 (368)
Q Consensus 303 l~g~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~--------~~~---~-~~~~~~~~~~k~~~~~~~~~~~~lG~ 363 (368)
|++.. ...+ ...|+++.+|+.+.+|... +.. . ...+...+++|+ ++++++++|||+
T Consensus 314 --g~~~~-~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~ 388 (449)
T 3kd9_A 314 --GKELH-FPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKG--VVDNETNRLLGV 388 (449)
T ss_dssp --TCCCC-CCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEE--EEETTTCBEEEE
T ss_pred --CCCcc-CCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEE--EEECCCCEEEEE
Confidence 43321 1111 1246788888887765321 111 1 123556789999 999999999999
Q ss_pred CC
Q 017664 364 KP 365 (368)
Q Consensus 364 ~~ 365 (368)
|+
T Consensus 389 ~~ 390 (449)
T 3kd9_A 389 QV 390 (449)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 12
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=6.1e-44 Score=342.46 Aligned_cols=342 Identities=18% Similarity=0.191 Sum_probs=251.2
Q ss_pred CCCcEEEECCChHHHHHHHHhhc--CCcEEEEc--------CCCceeeeccce---e---------------e----eec
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS--FADVVLID--------EKEYFEITWASL---R---------------A----VVE 62 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie--------~~~~~~~~~~~~---~---------------~----~~~ 62 (368)
.++||+||||||+|+++|++|++ |++|+||| +.+.+|+.+... . . ...
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999864 99999999 244454432110 0 0 000
Q ss_pred ---c--cccccceee------------cccc--cC-ceeEEEeEEEEeeccEEEec-----CC---eEEEecEEEEecCC
Q 017664 63 ---P--SFAVRSVIN------------HGDY--LS-NVKIVVSTAVSITDTEVVTA-----GG---QTFVYDYVVVATGH 114 (368)
Q Consensus 63 ---~--~~~~~~~~~------------~~~~--~~-~~~~~~~~~~~~~~~~v~~~-----~g---~~~~~d~lvlAtG~ 114 (368)
. .+....+.. .... .. +++++.+.+..++++++... ++ ..+.||+||+|||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs 161 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGS 161 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCC
Confidence 0 000000000 0011 13 78899999989998877663 56 78999999999999
Q ss_pred CCCCCCchHH-HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCcccccccCchhHHHHHHHH
Q 017664 115 VESVPKSRTE-RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFP-DKKVILVHRGPKLLEFVGSRASQIALDWL 192 (368)
Q Consensus 115 ~~~~p~~~~~-~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~-~~~v~~i~~~~~~l~~~~~~~~~~~~~~l 192 (368)
.|..|++++. .+.+..........+++++|||+|++|+|+|..+.+..+ +.+|+++++.+++++.+++++.+.+.+.+
T Consensus 162 ~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l 241 (490)
T 1fec_A 162 WPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQL 241 (490)
T ss_dssp EECCCCSBTGGGCBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHH
T ss_pred CCCCCCCCCccceecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHH
Confidence 9877765432 222222222222347899999999999999999986422 88999999999999999999999999999
Q ss_pred HcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCC
Q 017664 193 TSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKN 269 (368)
Q Consensus 193 ~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ 269 (368)
++.||++++++.|.+++.+++ .+.+.+|+++++|.||+|+|++|+.+++....+++.++++|+|.||+++|| +.|+
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~ 320 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDN 320 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTT
T ss_pred HhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEECCCCcc-CCCC
Confidence 999999999999999986642 678889989999999999999999875422233446788899999999998 8999
Q ss_pred eEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCcceeE--------e
Q 017664 270 VFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVAH--------F 334 (368)
Q Consensus 270 ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~--------~ 334 (368)
|||+|||++.+ ++++.|.+||+.+|+||. |..... ..|. ..++++.+|+++.++... .
T Consensus 321 IyA~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~~~-~~~~~~p~~~~~~~~~a~vG~~e~~a~~~~~~~~~~~~ 393 (490)
T 1fec_A 321 IYAIGDVTDRV--MLTPVAINEGAAFVDTVF----ANKPRA-TDHTKVACAVFSIPPMGVCGYVEEDAAKKYDQVAVYES 393 (490)
T ss_dssp EEECGGGGCSC--CCHHHHHHHHHHHHHHHH----SSCCCC-CCCSSCCEEECCSSCEEEEECCHHHHHHHCSEEEEEEE
T ss_pred EEEEeccCCCc--cCHHHHHHHHHHHHHHhc----CCCCCc-CCCCCccEEEECCCCeEEEeCCHHHHHhcCCCEEEEEe
Confidence 99999999753 478999999999999998 322111 1111 257889999988766432 1
Q ss_pred cCcc----c-cCccceee-eccccchhHHHHHcCCCCC
Q 017664 335 PFLT----I-SGRIPGWI-KSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 335 ~~~~----~-~~~~~~~~-k~~~~~~~~~~~~lG~~~~ 366 (368)
++.. + .+...+++ |+ ++++++++|||+|+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~ 429 (490)
T 1fec_A 394 SFTPLMHNISGSTYKKFMVRI--VTNHADGEVLGVHML 429 (490)
T ss_dssp EECCHHHHHHSCTTCCEEEEE--EEETTTTEEEEEEEE
T ss_pred ecChhhhhhhcCCCeEEEEEE--EEECCCCEEEEEEEE
Confidence 1111 1 23557889 98 999999999999863
No 13
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=7.8e-44 Score=340.85 Aligned_cols=340 Identities=22% Similarity=0.266 Sum_probs=236.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCceeeeccceeeeecccccc-c-c------eeeccccc---Ccee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEYFEITWASLRAVVEPSFAV-R-S------VINHGDYL---SNVK 81 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~~-~-~------~~~~~~~~---~~~~ 81 (368)
++||+|||||+||+++|..|+ + +.+|+|||+++.+++....+.......+.. . . +....+++ .+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 579999999999999999997 3 899999999998765443333222211110 1 1 11111111 2455
Q ss_pred EE-EeEEEEeecc--EEEecC---Ce--EEEecEEEEecCCCCCCCCchHH---------HHHHHHHHHHHH--hcCCeE
Q 017664 82 IV-VSTAVSITDT--EVVTAG---GQ--TFVYDYVVVATGHVESVPKSRTE---------RLSQYEKDFEKV--KSANSV 142 (368)
Q Consensus 82 ~~-~~~~~~~~~~--~v~~~~---g~--~~~~d~lvlAtG~~~~~p~~~~~---------~~~~~~~~~~~~--~~~~~v 142 (368)
+. ..++..++.. .+.+.+ +. .+.||+||+|||+.|..|++++. ...+.....+.+ ..++++
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~v 162 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKA 162 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEE
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEE
Confidence 53 4567777643 555443 54 78999999999998666554321 122233322222 247899
Q ss_pred EEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC
Q 017664 143 LIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS 219 (368)
Q Consensus 143 ~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~ 219 (368)
+|+|+|++|+|+|..+.+. .+.+|+++++.+++++ .+++++.+.+.+.+++.||+++++++|.+++.+++ .+.+.+
T Consensus 163 vViGgG~~g~e~A~~l~~~-~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~ 241 (472)
T 3iwa_A 163 VIVGGGFIGLEMAVSLADM-WGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITD 241 (472)
T ss_dssp EEECCSHHHHHHHHHHHHH-HCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEES
T ss_pred EEECCCHHHHHHHHHHHHh-cCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeC
Confidence 9999999999999998852 2789999999999998 88999999999999999999999999999987555 577888
Q ss_pred CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHH
Q 017664 220 GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKH 291 (368)
Q Consensus 220 g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~ 291 (368)
|+++++|.||+|+|++|+.+++...++ .++++|++.||+++|| +.|||||+|||+..+. +++++.|.+|
T Consensus 242 g~~i~aD~Vv~a~G~~p~~~l~~~~gl--~~~~~g~i~vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~ 318 (472)
T 3iwa_A 242 KRTLDADLVILAAGVSPNTQLARDAGL--ELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQ 318 (472)
T ss_dssp SCEEECSEEEECSCEEECCHHHHHHTC--CBCTTCCEECCTTCBC-SSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHH
T ss_pred CCEEEcCEEEECCCCCcCHHHHHhCCc--cCCCCCCEEECCCccc-CCCCEEEeccceecccccCCceeecchHHHHHHH
Confidence 889999999999999999888766554 6788999999999998 8999999999984321 3467899999
Q ss_pred HHHHHHHHHHHHcCCCCCC--ccc-c---ccCCCeEEEeecCCcceeE--------ecCc---cc-cCccceeeeccccc
Q 017664 292 ALVTAKNLKKLMMGRNKGT--MAT-Y---KPGYPIALVSLGRREGVAH--------FPFL---TI-SGRIPGWIKSRDLF 353 (368)
Q Consensus 292 g~~aa~~i~~~l~g~~~~~--~~~-~---~~~~~~~~~~~g~~~~~~~--------~~~~---~~-~~~~~~~~k~~~~~ 353 (368)
|+.||+||. |++... ..+ + .+.++++.+|+.+.+|... +... .+ .+...+++|+ ++
T Consensus 319 g~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~ 392 (472)
T 3iwa_A 319 GRVIGTNLA----DGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTIMTLQL--VV 392 (472)
T ss_dssp HHHHHHHHT----TCCCCCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------CEEEEE--EE
T ss_pred HHHHHHHhc----CCCccCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCceEEEEE--EE
Confidence 999999997 433211 101 0 1257788899888765321 1111 12 2666789999 99
Q ss_pred hhHHHHHcCCCC
Q 017664 354 VGKTRKQLGLKP 365 (368)
Q Consensus 354 ~~~~~~~lG~~~ 365 (368)
++++++|||+|+
T Consensus 393 ~~~~~~ilG~~~ 404 (472)
T 3iwa_A 393 DRPTRRVLGIQG 404 (472)
T ss_dssp ETTTCBEEEEEE
T ss_pred ECCCCEEEEEEE
Confidence 999999999986
No 14
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.5e-44 Score=343.78 Aligned_cols=341 Identities=21% Similarity=0.295 Sum_probs=253.8
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeecccee---ee--e-----------------cccccc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLR---AV--V-----------------EPSFAV 67 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~---~~--~-----------------~~~~~~ 67 (368)
+.++.++||+|||||++|+++|.+|++ |++|+|||+++.+|..+.... .. . -+....
T Consensus 38 ~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 38 ENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp TTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 455667999999999999999999984 999999999986654321100 00 0 000000
Q ss_pred ------cc---eee-cc---ccc-------CceeEE-EeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCCchHH--
Q 017664 68 ------RS---VIN-HG---DYL-------SNVKIV-VSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE-- 124 (368)
Q Consensus 68 ------~~---~~~-~~---~~~-------~~~~~~-~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~-- 124 (368)
.. +.. .. +++ .+++++ ...+..++++++.+. +..+.||+||+|||+.|..|++++.
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~~p~i~G~~~ 196 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPGTLDVPGVNA 196 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECCCCCSTTTTS
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCCCCCCCCccc
Confidence 00 000 01 111 267777 778888888888775 7789999999999999877765421
Q ss_pred -HHHHHHHHH-HHHhcC-CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEe
Q 017664 125 -RLSQYEKDF-EKVKSA-NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVIL 201 (368)
Q Consensus 125 -~~~~~~~~~-~~~~~~-~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~ 201 (368)
.+.+..... ...... ++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++...+.+.+++.||++++
T Consensus 197 ~~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~ 274 (523)
T 1mo9_A 197 KGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNA--TGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIIS 274 (523)
T ss_dssp BTEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEES
T ss_pred CcEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEE
Confidence 123333333 222235 999999999999999999985 588999999999999989999999999999999999999
Q ss_pred cceeeecccCCC------eEEcCCCc-EEecCEEEEccCCCCCch-hhhccccccccCCCCcEEeCCCeeecCCCCeEEe
Q 017664 202 NQSVTLNTISDG------LIETSSGE-TIDTDCHFMCTGKAMASS-WLRETILKDSLDGRGRLMVDENLRVRGFKNVFAI 273 (368)
Q Consensus 202 ~~~v~~i~~~~~------~v~~~~g~-~i~~d~vi~a~G~~p~~~-~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~ 273 (368)
++.|++++.+++ .+.+.+|+ ++++|.||+|+|++|+.+ ++...++ .++++|+|.||+++|| +.|+|||+
T Consensus 275 ~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl--~~~~~G~i~Vd~~~~t-~~~~IyA~ 351 (523)
T 1mo9_A 275 GSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGL--DLGPKGEVLVNEYLQT-SVPNVYAV 351 (523)
T ss_dssp SCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTC--CBCTTSCBCCCTTSBC-SSTTEEEC
T ss_pred CCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCC--ccCCCCCEEECCCCcc-CCCCEEEE
Confidence 999999876432 36778887 899999999999999988 6776655 6678899999999998 89999999
Q ss_pred cccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----Cc-cccccCCCeEEEeecCCccee--------EecCcc--
Q 017664 274 GDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKG----TM-ATYKPGYPIALVSLGRREGVA--------HFPFLT-- 338 (368)
Q Consensus 274 GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~----~~-~~~~~~~~~~~~~~g~~~~~~--------~~~~~~-- 338 (368)
|||++.+ .+++.|.+||+.||+||. |.+.. .. ......|+++.+|+++.++.. .+++..
T Consensus 352 GD~~~~~--~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~ 425 (523)
T 1mo9_A 352 GDLIGGP--MEMFKARKSGCYAARNVM----GEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMPPDTEN 425 (523)
T ss_dssp GGGGCSS--CSHHHHHHHHHHHHHHHT----TCCCCCCCCSCCEEEESSSEEEEEECCHHHHHHTTCCEEEEEESCCSTT
T ss_pred eecCCCc--ccHHHHHHHHHHHHHHHc----CCCCCCCCCCCCeEEECCCceEEEeCCHHHHHhCCCCEEEEEEeccccc
Confidence 9999865 378899999999999997 33211 01 111135778888888765532 222221
Q ss_pred -----------------cc--CccceeeeccccchhHHHHHcCCCC
Q 017664 339 -----------------IS--GRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 339 -----------------~~--~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
.. +...+++|+ ++++++++|||+|+
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~ 469 (523)
T 1mo9_A 426 GLNVALPASDRTMLYAFGKGTAHMSGFQKI--VIDAKTRKVLGAHH 469 (523)
T ss_dssp TTCSSCSCCTTTHHHHHSTTTGGGGCEEEE--EEETTTCBEEEEEE
T ss_pred ccccccccccccccceEEeecCCCCEEEEE--EEECCCCEEEEEEE
Confidence 12 555789998 99999999999986
No 15
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=5.5e-44 Score=342.53 Aligned_cols=341 Identities=17% Similarity=0.236 Sum_probs=248.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce---e---------------eee-------ccccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL---R---------------AVV-------EPSFA 66 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~---~---------------~~~-------~~~~~ 66 (368)
|+.++||+|||||+||+++|.+|+ .|++|+|||+++.++..+... . ... .....
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELD 82 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 445689999999999999999998 499999999977665322100 0 000 00000
Q ss_pred ccceeec------------ccc--cCceeEEEeEEEEeeccEEEe--cCC------------eEEEecEEEEecCCCCCC
Q 017664 67 VRSVINH------------GDY--LSNVKIVVSTAVSITDTEVVT--AGG------------QTFVYDYVVVATGHVESV 118 (368)
Q Consensus 67 ~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~v~~--~~g------------~~~~~d~lvlAtG~~~~~ 118 (368)
...+... ..+ ..+++++......++.+.+.. .++ ..++||+||+|||+.|..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 0000000 011 126788888777777765443 345 679999999999999776
Q ss_pred CC-chHH-HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCC
Q 017664 119 PK-SRTE-RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKK 196 (368)
Q Consensus 119 p~-~~~~-~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~g 196 (368)
|+ ++.. .+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.|
T Consensus 163 ~~~i~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~g 240 (482)
T 1ojt_A 163 LPFIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYST--LGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRF 240 (482)
T ss_dssp CSSCCCCTTEECHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGE
T ss_pred CCCCCccCcEEcHHHHhcccccCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEECCccccccCHHHHHHHHHHHHhcC
Confidence 65 3211 222233322222347899999999999999999986 4889999999999999999999999999999999
Q ss_pred cEEEecceeeecccCCC--eEEcCC----CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCe
Q 017664 197 VEVILNQSVTLNTISDG--LIETSS----GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNV 270 (368)
Q Consensus 197 v~i~~~~~v~~i~~~~~--~v~~~~----g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~i 270 (368)
|++++++.|.+++.+++ .+.+.+ |+++++|.||+|+|++|+.+++....+++.++++|+|.||+++|| +.|||
T Consensus 241 V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~I 319 (482)
T 1ojt_A 241 DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHI 319 (482)
T ss_dssp EEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTE
T ss_pred CEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCE
Confidence 99999999999876554 566665 778999999999999999987533333446777899999999998 89999
Q ss_pred EEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------Eec
Q 017664 271 FAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFP 335 (368)
Q Consensus 271 fa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~ 335 (368)
||+|||++.+ ++++.|.+||+.||+||. |.+. + ..|. ..|+++.+|+++.+|.. .++
T Consensus 320 yA~GD~~~~~--~l~~~A~~~g~~aa~~i~----g~~~-~-~~~~~~p~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~ 391 (482)
T 1ojt_A 320 YAIGDIVGQP--MLAHKAVHEGHVAAENCA----GHKA-Y-FDARVIPGVAYTSPEVAWVGETELSAKASARKITKANFP 391 (482)
T ss_dssp EECGGGTCSS--CCHHHHHHHHHHHHHHHT----TCCC-C-CCCCCCCEEECSSSCEEEEECCHHHHHHHTCCEEEEEEE
T ss_pred EEEEcccCCC--ccHHHHHHHHHHHHHHHc----CCCc-c-CCCCCCCEEEEcCCCeEEEeCCHHHHHhcCCCEEEEEEE
Confidence 9999999864 478999999999999997 3321 1 1121 25788999988765532 222
Q ss_pred Cc-----cccCccceeeeccccchhHHHHHcCCCCC
Q 017664 336 FL-----TISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 336 ~~-----~~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
+. ...+...+++|+ ++++++++|||+|+.
T Consensus 392 ~~~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~~ 425 (482)
T 1ojt_A 392 WAASGRAIANGCDKPFTKL--IFDAETGRIIGGGIV 425 (482)
T ss_dssp GGGCHHHHHTTCCSCEEEE--EEETTTCBEEEEEEE
T ss_pred cCcchHHhhcCCCcEEEEE--EEECCCCEEEEEEEE
Confidence 21 124556789999 999999999999863
No 16
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.5e-44 Score=341.72 Aligned_cols=339 Identities=19% Similarity=0.200 Sum_probs=248.4
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeee--------------------ecccccccce--
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAV--------------------VEPSFAVRSV-- 70 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~--------------------~~~~~~~~~~-- 70 (368)
++++||+||||||||+++|..|+ .|.+|+|||+++.+|+.|...... ....+....+
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 44689999999999999999997 599999999888877554211000 0000000000
Q ss_pred -----------eeccccc--CceeEEEeEEEEeecc--EEEecCCeE--EEecEEEEecCCCCCCCCchHH-HHHHHHHH
Q 017664 71 -----------INHGDYL--SNVKIVVSTAVSITDT--EVVTAGGQT--FVYDYVVVATGHVESVPKSRTE-RLSQYEKD 132 (368)
Q Consensus 71 -----------~~~~~~~--~~~~~~~~~~~~~~~~--~v~~~~g~~--~~~d~lvlAtG~~~~~p~~~~~-~~~~~~~~ 132 (368)
.....++ .+++++.+++..++++ .+.+.+++. +.||+||+|||+.|..|++++. .+.+....
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~ 161 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDI 161 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHH
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCCCccceEeHHHH
Confidence 0011111 2688888888888876 456667777 9999999999999776665432 23333333
Q ss_pred H----HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccc-CchhHHHHHHHHHcCCcEEEecceeee
Q 017664 133 F----EKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFV-GSRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 133 ~----~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~-~~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
. .....+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+ ++++.+.+.+.++ |++++++.|.+
T Consensus 162 ~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~ 236 (466)
T 3l8k_A 162 FGYKTSFRKLPQDMVIIGAGYIGLEIASIFRL--MGVQTHIIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTE 236 (466)
T ss_dssp HSTTCSCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEE
T ss_pred HHHHHHHhhCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEE
Confidence 2 112247899999999999999999985 588999999999999887 9899988888887 99999999998
Q ss_pred cccCC-C--eEEcC--CCc--EEecCEEEEccCCCCCchh-hhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCC
Q 017664 208 NTISD-G--LIETS--SGE--TIDTDCHFMCTGKAMASSW-LRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDI 279 (368)
Q Consensus 208 i~~~~-~--~v~~~--~g~--~i~~d~vi~a~G~~p~~~~-~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~ 279 (368)
++.++ + .+.+. +|+ ++++|.+|+|+|++|+.++ +...+ +.++++| +.||+++|| +.|||||+|||++.
T Consensus 237 i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~g--l~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~~ 312 (466)
T 3l8k_A 237 VKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIG--LSISKTG-IVVDETMKT-NIPNVFATGDANGL 312 (466)
T ss_dssp EEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGT--CCBCSSS-BCCCTTCBC-SSTTEEECGGGTCS
T ss_pred EEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcC--ceeCCCC-EeECCCccC-CCCCEEEEEecCCC
Confidence 88754 4 46666 665 8999999999999999883 34444 4778889 999999999 89999999999986
Q ss_pred CccchHHHHHHHHHHHHHHHHHH--HcCCC-C--CCccccccCCCeEEEeecCCccee--------EecCcc-----ccC
Q 017664 280 PEIKQGYLAQKHALVTAKNLKKL--MMGRN-K--GTMATYKPGYPIALVSLGRREGVA--------HFPFLT-----ISG 341 (368)
Q Consensus 280 ~~~~~~~~a~~~g~~aa~~i~~~--l~g~~-~--~~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~~-----~~~ 341 (368)
+ ++++.|.+||+.||+||... ..... . .+...| ..|+++.+|+++.+|.. .+++.. ..+
T Consensus 313 ~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~-~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~ 389 (466)
T 3l8k_A 313 A--PYYHAAVRMSIAAANNIMANGMPVDYVDVKSIPVTIY-TIPSLSYVGILPSKARKMGIEIVEAEYNMEEDVSAQIYG 389 (466)
T ss_dssp C--CSHHHHHHHHHHHHHHHHTTTSCCCCCCSTTSCEEEC-SSSCEEEEECCHHHHHHHTCCEEEEEEEGGGSHHHHHHT
T ss_pred C--ccHhHHHHHHHHHHHHHhCCCCCccccCCCCCcEEEE-CCCCeEEecCCHHHHHhCCCCEEEEEEEcccChhheecC
Confidence 3 47899999999999999832 00000 0 001112 25789999998877642 222221 345
Q ss_pred ccceeeeccccchhHHHHHcCCCCC
Q 017664 342 RIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 342 ~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
...+++|+ ++++++++|||+|+.
T Consensus 390 ~~~g~~k~--i~~~~~~~ilG~~~~ 412 (466)
T 3l8k_A 390 QKEGVLKL--IFERGSMRLIGAWMI 412 (466)
T ss_dssp CCCCEEEE--EEETTTCBEEEEEEE
T ss_pred CCeEEEEE--EEECCCCEEEEEEEE
Confidence 66899999 999999999999863
No 17
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=1e-43 Score=338.98 Aligned_cols=337 Identities=20% Similarity=0.234 Sum_probs=246.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce---ee-------------------ee--cccccccce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL---RA-------------------VV--EPSFAVRSV 70 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~---~~-------------------~~--~~~~~~~~~ 70 (368)
++||+||||||||+++|.+|+ .|++|+|||+++ +|+.+... .. .. ........+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 589999999999999999998 499999999987 44322100 00 00 000000000
Q ss_pred ee------------ccccc--CceeEEEeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCC-chHH-HHHHHHHHHH
Q 017664 71 IN------------HGDYL--SNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPK-SRTE-RLSQYEKDFE 134 (368)
Q Consensus 71 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~-~~~~-~~~~~~~~~~ 134 (368)
.. ...++ .+++++.+.+..++++++.+. ++.++||+||+|||++|..|+ ++.. .+.+.....+
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~ 163 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVG-GERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALK 163 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEET-TEEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHh
Confidence 00 01111 368888888877888888776 778999999999999987664 4321 2223333322
Q ss_pred HHh-cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC
Q 017664 135 KVK-SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG 213 (368)
Q Consensus 135 ~~~-~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~ 213 (368)
... .+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++
T Consensus 164 l~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~ 241 (464)
T 2eq6_A 164 VEEGLPKRLLVIGGGAVGLELGQVYRR--LGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKD 241 (464)
T ss_dssp GGGCCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT
T ss_pred hhhhcCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC
Confidence 222 47899999999999999999985 488999999999999988999999999999999999999999999876554
Q ss_pred --eEEcC-C--Cc--EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHH
Q 017664 214 --LIETS-S--GE--TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGY 286 (368)
Q Consensus 214 --~v~~~-~--g~--~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~ 286 (368)
.+.+. + |+ ++++|.||+|+|.+|+.+++....+++.++++|++.||+++|| +.|+|||+|||++.+. +++
T Consensus 242 ~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~~--l~~ 318 (464)
T 2eq6_A 242 GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAARPPL--LAH 318 (464)
T ss_dssp EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTCSSC--CHH
T ss_pred EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCCCcc--cHH
Confidence 45554 5 76 8999999999999999886422223346677899999999998 8999999999997643 788
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcc--ccc--cCCCeEEEeecCCccee--------EecCc-----cccCccceeeec
Q 017664 287 LAQKHALVTAKNLKKLMMGRNKGTMA--TYK--PGYPIALVSLGRREGVA--------HFPFL-----TISGRIPGWIKS 349 (368)
Q Consensus 287 ~a~~~g~~aa~~i~~~l~g~~~~~~~--~~~--~~~~~~~~~~g~~~~~~--------~~~~~-----~~~~~~~~~~k~ 349 (368)
.|.+||+.+|+||. |.+....+ ++. ..|+++.+|+++.++.. .+++. ...+...+++|+
T Consensus 319 ~A~~~g~~aa~~i~----g~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~ 394 (464)
T 2eq6_A 319 KAMREGLIAAENAA----GKDSAFDYQVPSVVYTSPEWAGVGLTEEEAKRAGYKVKVGKFPLAASGRALTLGGAEGMVKV 394 (464)
T ss_dssp HHHHHHHHHHHHHT----TCCCCCCCCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTSCCCCEEEE
T ss_pred HHHHHHHHHHHHhc----CCCcccCCCCCeEEECCCCEEEEeCCHHHHHhcCCCEEEEEEEcCcchhhhhcCCCcEEEEE
Confidence 99999999999997 33211001 111 24778888887765432 22221 123556789998
Q ss_pred cccchhHHHHHcCCCC
Q 017664 350 RDLFVGKTRKQLGLKP 365 (368)
Q Consensus 350 ~~~~~~~~~~~lG~~~ 365 (368)
++++++++|||+|+
T Consensus 395 --~~~~~~~~ilG~~~ 408 (464)
T 2eq6_A 395 --VGDEETDLLLGVFI 408 (464)
T ss_dssp --EEETTTCBEEEEEE
T ss_pred --EEECCCCEEEEEEE
Confidence 99999999999986
No 18
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=4.6e-44 Score=343.26 Aligned_cols=342 Identities=22% Similarity=0.249 Sum_probs=252.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecccee------------------ee----e---cccccccc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLR------------------AV----V---EPSFAVRS 69 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~------------------~~----~---~~~~~~~~ 69 (368)
++||+|||||++|+++|.+|+ +|++|+|||++ .+|+.+.... .. . ...+....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 689999999999999999998 59999999994 4443221000 00 0 00000000
Q ss_pred ee--------e----cccc--cCceeEEEeEEEEeeccEEEec-CCeEEEecEEEEecCCCCC-CCCchHHH-HHHHHHH
Q 017664 70 VI--------N----HGDY--LSNVKIVVSTAVSITDTEVVTA-GGQTFVYDYVVVATGHVES-VPKSRTER-LSQYEKD 132 (368)
Q Consensus 70 ~~--------~----~~~~--~~~~~~~~~~~~~~~~~~v~~~-~g~~~~~d~lvlAtG~~~~-~p~~~~~~-~~~~~~~ 132 (368)
+. . ...+ ..+++++...+..++++.+.+. ++..+.||++++|||+.|. .|+++... +.+....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~ 184 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNEI 184 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHHH
Confidence 00 0 0001 1267888888999998888876 7788999999999999987 77654322 1112222
Q ss_pred HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCC
Q 017664 133 FEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISD 212 (368)
Q Consensus 133 ~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 212 (368)
......+++++|+|+|++|+|+|..+.+ .+.+|+++++.+++++.+++++...+.+.+++.||++++++.|.+++.++
T Consensus 185 ~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 262 (484)
T 3o0h_A 185 FDLEKLPKSIVIVGGGYIGVEFANIFHG--LGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTE 262 (484)
T ss_dssp GGCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECS
T ss_pred HhHHhcCCcEEEECcCHHHHHHHHHHHH--cCCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC
Confidence 2222347899999999999999999885 58899999999999999999999999999999999999999999998765
Q ss_pred C--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHH
Q 017664 213 G--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQK 290 (368)
Q Consensus 213 ~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~ 290 (368)
+ .+.+.+|+++++|.||+|+|++|+.+++....+++.++++|++.||+++|+ +.|||||+|||++.+ ++++.|..
T Consensus 263 ~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~~~A~~ 339 (484)
T 3o0h_A 263 NCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTGHI--QLTPVAIH 339 (484)
T ss_dssp SSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGTSC--CCHHHHHH
T ss_pred CEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCCCC--cCHHHHHH
Confidence 5 688889989999999999999999887433334457788999999999998 899999999999754 47899999
Q ss_pred HHHHHHHHHHHHHcCC-CCC--CccccccCCCeEEEeecCCcceeE--------ecCcc-----ccCccceeeeccccch
Q 017664 291 HALVTAKNLKKLMMGR-NKG--TMATYKPGYPIALVSLGRREGVAH--------FPFLT-----ISGRIPGWIKSRDLFV 354 (368)
Q Consensus 291 ~g~~aa~~i~~~l~g~-~~~--~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~-----~~~~~~~~~k~~~~~~ 354 (368)
||+.+|+||+...... +.. +...| ..|+++.+|+++++|... +++.. ..+...+++|+ +++
T Consensus 340 ~g~~aa~~i~~~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~ 416 (484)
T 3o0h_A 340 DAMCFVKNAFENTSTTPDYDLITTAVF-SQPEIGTVGLSEEDALHRYKRVEIYRTVFRPMRNVLSGSPEKMFMKL--VVD 416 (484)
T ss_dssp HHHHHHHHHHC---CCCCCTTCCEEEC-CSSCEEEEECCHHHHHHHCSEEEEEEEEECCHHHHHHTCCCCEEEEE--EEE
T ss_pred HHHHHHHHHcCCCCCcCCCCCCcEEEE-CCCCEEEeeCCHHHHHHcCCCEEEEEecCCcchhhccCCCCcEEEEE--EEE
Confidence 9999999998321110 000 00112 247899999998876432 22211 34566899999 999
Q ss_pred hHHHHHcCCCCC
Q 017664 355 GKTRKQLGLKPT 366 (368)
Q Consensus 355 ~~~~~~lG~~~~ 366 (368)
+++++|||+|+.
T Consensus 417 ~~~~~ilG~~~~ 428 (484)
T 3o0h_A 417 GESRIVVGAHVL 428 (484)
T ss_dssp TTTCBEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 999999999863
No 19
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.3e-43 Score=340.85 Aligned_cols=339 Identities=18% Similarity=0.159 Sum_probs=249.9
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCC--------ceeeec---ccee-----------ee------------
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKE--------YFEITW---ASLR-----------AV------------ 60 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~--------~~~~~~---~~~~-----------~~------------ 60 (368)
.||++||||||||++||.++++ |.+|+|||+.+ .+|+.. +.++ ..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 3799999999999999999875 99999999754 233211 0000 00
Q ss_pred ecccccccceeec------------ccc--cCceeEEEeEEEEeeccEEEe------cCCeEEEecEEEEecCCCCCCCC
Q 017664 61 VEPSFAVRSVINH------------GDY--LSNVKIVVSTAVSITDTEVVT------AGGQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 61 ~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~v~~------~~g~~~~~d~lvlAtG~~~~~p~ 120 (368)
....+....+..+ ... ..+++++.+...+++++++.. .+.+.+++|++|||||++|.+|+
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~ 201 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPD 201 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCS
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCC
Confidence 0000000000000 000 126889999999999987643 23467999999999999998885
Q ss_pred c---hHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCc
Q 017664 121 S---RTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKV 197 (368)
Q Consensus 121 ~---~~~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv 197 (368)
. ....+.+.+..+.....+++++|||+|++|+|+|..+++ .+.+|+++.+ +++++.+++++...+.+.|++.||
T Consensus 202 ~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~--lG~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi 278 (542)
T 4b1b_A 202 DVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNS--LGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGV 278 (542)
T ss_dssp SSBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--HTCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTC
T ss_pred cccCCCccccCchhhhccccCCceEEEECCCHHHHHHHHHHHh--cCCeEEEecc-cccccccchhHHHHHHHHHHhhcc
Confidence 3 223334455554444568999999999999999999985 6899999987 467899999999999999999999
Q ss_pred EEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcE-EeCCCeeecCCCCeEEec
Q 017664 198 EVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRL-MVDENLRVRGFKNVFAIG 274 (368)
Q Consensus 198 ~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i-~vd~~~~~~~~~~ifa~G 274 (368)
++++++.+..++..++ .+.+.+++++++|.|++|+|++||++.+..+.+++.++.++.+ .+|+++|| +.|||||+|
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiG 357 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVG 357 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccc-cCCCeEEec
Confidence 9999999998887666 6778888899999999999999999999888877777776654 77888998 899999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCc-------cccccCCCeEEEeecCCcceeE--------ecC--c
Q 017664 275 DITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTM-------ATYKPGYPIALVSLGRREGVAH--------FPF--L 337 (368)
Q Consensus 275 D~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~--------~~~--~ 337 (368)
||++.. +.+++.|.+||+.+++||. |...... ..| ..|+++.+|+++.+|... +.+ .
T Consensus 358 Dv~~~~-p~La~~A~~eg~~aa~~i~----g~~~~~~d~~~iP~~vf-t~PeiA~VGlTE~eA~~~g~~~~v~~~~~~~~ 431 (542)
T 4b1b_A 358 DVAENV-PELAPVAIKAGEILARRLF----KDSDEIMDYSYIPTSIY-TPIEYGACGYSEEKAYELYGKSNVEVFLQEFN 431 (542)
T ss_dssp TSBTTC-CCCHHHHHHHHHHHHHHHH----SCCCCCCCCSSCCEEEC-SSSCEEEEECCHHHHHHHHCTTTEEEEEC---
T ss_pred cccCCc-hhHHHHHHHHHHHHHHHHh----cCCCcccCCCCCceEEe-CCCCeEEEeCCHHHHHHhCCCCcEEEEEeecc
Confidence 999652 3488999999999999998 4322111 122 258999999998877421 111 0
Q ss_pred --------------------cccCccceeeecccc-chhHHHHHcCCCCC
Q 017664 338 --------------------TISGRIPGWIKSRDL-FVGKTRKQLGLKPT 366 (368)
Q Consensus 338 --------------------~~~~~~~~~~k~~~~-~~~~~~~~lG~~~~ 366 (368)
.+.+...+++|+ + +++++++|||+|+.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKl--i~~~~~t~~ILGa~iv 479 (542)
T 4b1b_A 432 NLEISAVHRQKHIRAQKDEYDLDVSSTCLAKL--VCLKNEDNRVIGFHYV 479 (542)
T ss_dssp --------------------------CCCEEE--EEETTTTTBEEEEEEE
T ss_pred chhhhhhhhhhhhhcccccccccCCCceEEEE--EEEeCCCCEEEEEEEE
Confidence 012344688997 5 57789999999863
No 20
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.6e-43 Score=339.19 Aligned_cols=344 Identities=20% Similarity=0.245 Sum_probs=249.5
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc------eeeeccce---e---------------e-eecc-----
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY------FEITWASL---R---------------A-VVEP----- 63 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~------~~~~~~~~---~---------------~-~~~~----- 63 (368)
+++||+||||||||+++|.+|++ |++|+|||+++. +|+.+... . . ....
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 46899999999999999999984 999999999862 33221000 0 0 0000
Q ss_pred --cccccceeec------------ccc--cCceeEEEeEEEEeeccE--EEecCC--eEEEecEEEEecCCCCCCCCc--
Q 017664 64 --SFAVRSVINH------------GDY--LSNVKIVVSTAVSITDTE--VVTAGG--QTFVYDYVVVATGHVESVPKS-- 121 (368)
Q Consensus 64 --~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lvlAtG~~~~~p~~-- 121 (368)
.+........ ..+ ..+++++...+..++++. +...++ ..+.||+||+|||+.|..|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~ 161 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAP 161 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCC
Confidence 0000000000 000 126788888888888763 445556 579999999999999764432
Q ss_pred -hHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEE
Q 017664 122 -RTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVI 200 (368)
Q Consensus 122 -~~~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~ 200 (368)
....+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++
T Consensus 162 ~~~~~v~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~ 239 (476)
T 3lad_A 162 VDQDVIVDSTGALDFQNVPGKLGVIGAGVIGLELGSVWAR--LGAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKIL 239 (476)
T ss_dssp CCSSSEEEHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEE
T ss_pred CCcccEEechhhhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEE
Confidence 222233333333323457899999999999999999985 48899999999999999999999999999999999999
Q ss_pred ecceeeecccCCC--eEEcCCC---cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecc
Q 017664 201 LNQSVTLNTISDG--LIETSSG---ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGD 275 (368)
Q Consensus 201 ~~~~v~~i~~~~~--~v~~~~g---~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD 275 (368)
+++.|.+++.+++ .+.+.++ +++++|.||+|+|++|+.+++....+++.++++|++.||+++|| +.|||||+||
T Consensus 240 ~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD 318 (476)
T 3lad_A 240 LGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGD 318 (476)
T ss_dssp ETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGG
T ss_pred ECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEc
Confidence 9999999987655 4555544 68999999999999999886544444557888999999999998 8999999999
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC--CccccccCCCeEEEeecCCccee--------EecCc-----ccc
Q 017664 276 ITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKG--TMATYKPGYPIALVSLGRREGVA--------HFPFL-----TIS 340 (368)
Q Consensus 276 ~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~--~~~~~~~~~~~~~~~~g~~~~~~--------~~~~~-----~~~ 340 (368)
|++.+. +++.|.+||+.||+||.......+.. +...| ..|+++.+|+++++|.. .+++. .+.
T Consensus 319 ~~~~~~--~~~~A~~~g~~aa~~i~g~~~~~~~~~~p~~~~-~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~ 395 (476)
T 3lad_A 319 VVRGAM--LAHKASEEGVVVAERIAGHKAQMNYDLIPAVIY-THPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAA 395 (476)
T ss_dssp GSSSCC--CHHHHHHHHHHHHHHHHHCCCCCCTTCCCEEEC-SSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHH
T ss_pred cCCCcc--cHHHHHHHHHHHHHHhcCCCcccCCCCCCEEEE-CcCCEEEeeCCHHHHHhcCCCEEEEEEeccccchheec
Confidence 996544 78999999999999998421110000 11122 25788999998876642 22221 123
Q ss_pred CccceeeeccccchhHHHHHcCCCCC
Q 017664 341 GRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 341 ~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
+...+++|+ ++++++++|||+|+.
T Consensus 396 ~~~~~~~k~--~~~~~~~~ilG~~~~ 419 (476)
T 3lad_A 396 NDTAGFVKV--IADAKTDRVLGVHVI 419 (476)
T ss_dssp TCCCCEEEE--EEETTTCBEEEEEEE
T ss_pred CCCcEEEEE--EEECCCCEEEEEEEE
Confidence 556789999 999999999999863
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.7e-43 Score=338.17 Aligned_cols=337 Identities=19% Similarity=0.245 Sum_probs=245.8
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceee-----------------------eec----ccccc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRA-----------------------VVE----PSFAV 67 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~-----------------------~~~----~~~~~ 67 (368)
++||+|||||+||+++|.+|++ |++|+|||+++.+|+.+..... .+. .....
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5799999999999999999984 9999999999876643211000 000 00000
Q ss_pred cceee------------ccccc--CceeEEEeEEEEeeccE--EEecCC--eEEEecEEEEecCCCCCCCCch---HHHH
Q 017664 68 RSVIN------------HGDYL--SNVKIVVSTAVSITDTE--VVTAGG--QTFVYDYVVVATGHVESVPKSR---TERL 126 (368)
Q Consensus 68 ~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lvlAtG~~~~~p~~~---~~~~ 126 (368)
..+.. ..+++ .+++++...+..++++. +.+.+| ..++||+||+|||+.|..|++. ...+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v 161 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVV 161 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCce
Confidence 00000 01111 26788888877788764 445567 7899999999999987666532 2223
Q ss_pred HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHH-HcCCcEEEeccee
Q 017664 127 SQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWL-TSKKVEVILNQSV 205 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l-~~~gv~i~~~~~v 205 (368)
.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+ ++.||+++++++|
T Consensus 162 ~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v 239 (468)
T 2qae_A 162 LSSTGALALPRVPKTMVVIGGGVIGLELGSVWAR--LGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKV 239 (468)
T ss_dssp ECHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEE
T ss_pred echHHHhhcccCCceEEEECCCHHHHHHHHHHHH--hCCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 3333333322357899999999999999999985 588999999999999999999999999999 9999999999999
Q ss_pred eecccCCC--eEEcC--CC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCC-
Q 017664 206 TLNTISDG--LIETS--SG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITD- 278 (368)
Q Consensus 206 ~~i~~~~~--~v~~~--~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~- 278 (368)
.+++.+++ .+.+. +| +++++|.||+|+|++|+.+++....+++.++++|+|.||+++|| +.|||||+|||++
T Consensus 240 ~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~ 318 (468)
T 2qae_A 240 VGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVDK 318 (468)
T ss_dssp EEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBSS
T ss_pred EEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCCC
Confidence 99987654 45544 66 68999999999999999987432223346777899999999998 8999999999998
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----c
Q 017664 279 IPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----T 338 (368)
Q Consensus 279 ~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~ 338 (368)
.+ ++++.|.+||+.||+||. |++.. ..|. ..|+++.+|+++.++.. .+++. .
T Consensus 319 ~~--~~~~~A~~~g~~aa~~i~----~~~~~--~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 390 (468)
T 2qae_A 319 GP--MLAHKAEDEGVACAEILA----GKPGH--VNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAK 390 (468)
T ss_dssp SC--SCHHHHHHHHHHHHHHHT----TCCCC--CCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred CC--ccHhHHHHHHHHHHHHHc----CCCcc--CCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEecccchhhh
Confidence 43 478999999999999997 33211 1121 24678888887765532 12221 1
Q ss_pred ccCccceeeeccccchhHHHHHcCCCC
Q 017664 339 ISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 339 ~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
..+...+++|+ ++++++++|||+|+
T Consensus 391 ~~~~~~~~~kl--~~~~~~~~ilG~~~ 415 (468)
T 2qae_A 391 AVSTEDGFVKV--LVDKATDRILGVHI 415 (468)
T ss_dssp HTTCCCCEEEE--EEETTTCBEEEEEE
T ss_pred hcCCCcEEEEE--EEECCCCEEEEEEE
Confidence 34556789999 99999999999986
No 22
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=9.7e-44 Score=340.71 Aligned_cols=344 Identities=22% Similarity=0.251 Sum_probs=248.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce------------------eeee-------ccccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL------------------RAVV-------EPSFA 66 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~------------------~~~~-------~~~~~ 66 (368)
++.++||+||||||||+++|..|+ .|++|+|||++. +|+.+... .... ...+.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFN 95 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 345689999999999999999998 499999999874 33221100 0000 00000
Q ss_pred ccceee------------cccc--cCceeEEEeEEEEeecc--EEEecCCeEEEecEEEEecCCCCCCC---CchHHH-H
Q 017664 67 VRSVIN------------HGDY--LSNVKIVVSTAVSITDT--EVVTAGGQTFVYDYVVVATGHVESVP---KSRTER-L 126 (368)
Q Consensus 67 ~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p---~~~~~~-~ 126 (368)
...+.. .... ..+++++.+.+..+++. .+. .+++.+.||+||+|||+.|..| ++++.. .
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~~~ 174 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGASLG 174 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCcee
Confidence 000000 0000 12678888888888764 455 5778899999999999997776 554322 1
Q ss_pred HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceee
Q 017664 127 SQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.+.
T Consensus 175 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~ 252 (478)
T 3dk9_A 175 ITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSA--LGSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVK 252 (478)
T ss_dssp BCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEE
T ss_pred EchHHhhchhhcCccEEEECCCHHHHHHHHHHHH--cCCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 1222222222347899999999999999999985 48899999999999999999999999999999999999999999
Q ss_pred ecccCCC----eEEcCC-------CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecc
Q 017664 207 LNTISDG----LIETSS-------GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGD 275 (368)
Q Consensus 207 ~i~~~~~----~v~~~~-------g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD 275 (368)
+++.+++ .+.+.+ |+++++|.||+|+|++|+.+.+....+++.++++|++.||+++|| +.|||||+||
T Consensus 253 ~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD 331 (478)
T 3dk9_A 253 EVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGD 331 (478)
T ss_dssp EEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGG
T ss_pred EEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEe
Confidence 8876533 355554 267999999999999999885433344457788999999999998 8999999999
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHcCCCC----CCccccccCCCeEEEeecCCcceeEe----------cCc----
Q 017664 276 ITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNK----GTMATYKPGYPIALVSLGRREGVAHF----------PFL---- 337 (368)
Q Consensus 276 ~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~---- 337 (368)
|++.+ ++++.|.+||+.+|+||+........ .+...| ..|+++.+|+++++|..+. ++.
T Consensus 332 ~~~~~--~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~~~~~~~~~~~~~~~~~~ 408 (478)
T 3dk9_A 332 VCGKA--LLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVF-SHPPIGTVGLTEDEAIHKYGIENVKTYSTSFTPMYH 408 (478)
T ss_dssp GGCSS--CCHHHHHHHHHHHHHHHHSCCTTCCCCCTTCCEEEC-CSSCEEEEECCHHHHHHHHCGGGEEEEEEEECCGGG
T ss_pred cCCCC--ccHhHHHHHHHHHHHHHcCCCCcccCCCCCCCeEEE-CCCceEEeeCCHHHHHhhCCCccEEEEEeecCcchh
Confidence 99654 47899999999999999832100000 001122 2578999999988765321 111
Q ss_pred -cccCccceeeeccccchhHHHHHcCCCCC
Q 017664 338 -TISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 338 -~~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
...+...+++|+ ++++++++|||+|+.
T Consensus 409 ~~~~~~~~g~~k~--i~~~~~~~ilG~~~~ 436 (478)
T 3dk9_A 409 AVTKRKTKCVMKM--VCANKEEKVVGIHMQ 436 (478)
T ss_dssp GGCSSCCCEEEEE--EEETTTTEEEEEEEE
T ss_pred hhhcCCCcEEEEE--EEECCCCEEEEEEEE
Confidence 124566899999 999999999999863
No 23
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.4e-44 Score=342.14 Aligned_cols=336 Identities=19% Similarity=0.272 Sum_probs=235.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce---e-----------eee------c----ccccccce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL---R-----------AVV------E----PSFAVRSV 70 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~---~-----------~~~------~----~~~~~~~~ 70 (368)
++||+||||||||+++|.+|+ .|++|+|||+++ +|+.|... . ... . ..+....+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 489999999999999999997 499999999986 43322100 0 000 0 00000000
Q ss_pred e------------ecccc--cCceeEEEeEEEEeeccEEEecC-------------CeEEEecEEEEecCCCCCCCCchH
Q 017664 71 I------------NHGDY--LSNVKIVVSTAVSITDTEVVTAG-------------GQTFVYDYVVVATGHVESVPKSRT 123 (368)
Q Consensus 71 ~------------~~~~~--~~~~~~~~~~~~~~~~~~v~~~~-------------g~~~~~d~lvlAtG~~~~~p~~~~ 123 (368)
. ....+ ..+++++...+..++++.+...+ +..+.||+||+|||+.|..|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G 160 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCC
Confidence 0 00011 12678887777777766665533 567999999999999987776543
Q ss_pred H-HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEec
Q 017664 124 E-RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILN 202 (368)
Q Consensus 124 ~-~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~ 202 (368)
. ...+....... ..+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||+++++
T Consensus 161 ~~~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 161 IENTISSDEFFNI-KESKKIGIVGSGYIAVELINVIKR--LGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTF 237 (500)
T ss_dssp GGGCEEHHHHTTC-CCCSEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCcccCHHHHhcc-CCCCeEEEECChHHHHHHHHHHHH--cCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEEC
Confidence 2 12222222221 127899999999999999999984 5889999999999999999999999999999999999999
Q ss_pred ceeeecccCC-C--eEEcCCCcE-EecCEEEEccCCCCCchhh--hccccccccCCCCcEEeCCCeeecCCCCeEEeccc
Q 017664 203 QSVTLNTISD-G--LIETSSGET-IDTDCHFMCTGKAMASSWL--RETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDI 276 (368)
Q Consensus 203 ~~v~~i~~~~-~--~v~~~~g~~-i~~d~vi~a~G~~p~~~~~--~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~ 276 (368)
+.|.+++.++ + .+.+.+|++ +++|.||+|+|++|+.+.+ ...++ .+ ++|+|.||+++|| +.|+|||+|||
T Consensus 238 ~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~--~~-~~G~i~vd~~~~t-~~~~iya~GD~ 313 (500)
T 1onf_A 238 ADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNV--ET-NNNYIVVDENQRT-SVNNIYAVGDC 313 (500)
T ss_dssp CCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTC--CB-SSSCEEECTTCBC-SSSSEEECSTT
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCc--cc-cCCEEEECCCccc-CCCCEEEEecc
Confidence 9999987653 3 677888987 9999999999999998644 44444 55 6899999999997 89999999999
Q ss_pred CCC--------------------------------CccchHHHHHHHHHHHHHHHHHHHcCCCCCCc-------cccccC
Q 017664 277 TDI--------------------------------PEIKQGYLAQKHALVTAKNLKKLMMGRNKGTM-------ATYKPG 317 (368)
Q Consensus 277 ~~~--------------------------------~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~-------~~~~~~ 317 (368)
+.. ..+.+++.|.+||+.||+||. |....+. ..| ..
T Consensus 314 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~-~~ 388 (500)
T 1onf_A 314 CMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF----LKKTRKTNYKLIPTVIF-SH 388 (500)
T ss_dssp EEEC------------------------------CBCCCCHHHHHHHHHHHHHHHH----SCTTCCCCCSSCCEEEC-CS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh----CCCCccCCCCCCCeEEE-cC
Confidence 921 234578999999999999998 3221110 112 24
Q ss_pred CCeEEEeecCCcceeEe----------cC--c---c----ccCccceeeeccccchhHHHHHcCCCCC
Q 017664 318 YPIALVSLGRREGVAHF----------PF--L---T----ISGRIPGWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 318 ~~~~~~~~g~~~~~~~~----------~~--~---~----~~~~~~~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
++++.+|+++.++..++ ++ . . ..+...+++|+ ++++++++|||+|+.
T Consensus 389 ~~~a~vGl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~ilG~~~~ 454 (500)
T 1onf_A 389 PPIGTIGLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKL--VCVGKDELIKGLHII 454 (500)
T ss_dssp SCEEEEECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEE--EEETTTTEEEEEEEE
T ss_pred cceEEEeCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEE--EEECCCCEEEEEEEE
Confidence 78899999876654321 01 0 1 12345678998 999999999999863
No 24
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=6e-43 Score=335.88 Aligned_cols=337 Identities=20% Similarity=0.262 Sum_probs=242.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc-C---CcEEEEcCCCceeeeccceeeeeccc--ccccceeeccccc--CceeEE-EeE
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-F---ADVVLIDEKEYFEITWASLRAVVEPS--FAVRSVINHGDYL--SNVKIV-VST 86 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g---~~v~lie~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~-~~~ 86 (368)
++||+|||||+||+++|..|++ | .+|+|||+++.+++.+..+....... ...+......+++ .+++++ ...
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 5899999999999999999974 6 99999999987665443222111111 0111111111111 256664 344
Q ss_pred EEEee--ccEEEec-C--CeEEEecEEEEecCCCCCCCCchH--------------HH------HHHHHHHHHHH--hcC
Q 017664 87 AVSIT--DTEVVTA-G--GQTFVYDYVVVATGHVESVPKSRT--------------ER------LSQYEKDFEKV--KSA 139 (368)
Q Consensus 87 ~~~~~--~~~v~~~-~--g~~~~~d~lvlAtG~~~~~p~~~~--------------~~------~~~~~~~~~~~--~~~ 139 (368)
+..++ .+.+.+. + +..+.||+||+|||++|..|++++ .. +.+.....+.. ..+
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 194 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDI 194 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCC
Confidence 66676 4466655 4 357999999999999976664332 11 22344444444 568
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEE
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIE 216 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~ 216 (368)
++++|||+|++|+|+|..|.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|++++.++. .+.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~ 272 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQR--KGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKII 272 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEE
Confidence 999999999999999999985 4889999999999888 78999999999999999999999999999886433 355
Q ss_pred cCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHH
Q 017664 217 TSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLA 288 (368)
Q Consensus 217 ~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a 288 (368)
+ +|+++++|.||+|+|++|+.+++... + .++++|+|.||+++|| +.|||||+|||+..+. +.+++.|
T Consensus 273 ~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l--~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A 347 (490)
T 2bc0_A 273 T-DKNEYDVDMVILAVGFRPNTTLGNGK-I--DLFRNGAFLVNKRQET-SIPGVYAIGDCATIYDNATRDTNYIALASNA 347 (490)
T ss_dssp E-SSCEEECSEEEECCCEEECCGGGTTC-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGBCEEETTTTEEECCCCHHHH
T ss_pred E-CCcEEECCEEEECCCCCcChHHHHhh-h--ccCCCCCEEECCCccc-CCCCEEEeeeeEEeccccCCceeecccHHHH
Confidence 5 67889999999999999999887654 4 6678899999999999 8999999999997532 2478999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCc----cccc--cCCCeEEEeecCCcceeE--------ec---Cccc-c-Cccceeeec
Q 017664 289 QKHALVTAKNLKKLMMGRNKGTM----ATYK--PGYPIALVSLGRREGVAH--------FP---FLTI-S-GRIPGWIKS 349 (368)
Q Consensus 289 ~~~g~~aa~~i~~~l~g~~~~~~----~~~~--~~~~~~~~~~g~~~~~~~--------~~---~~~~-~-~~~~~~~k~ 349 (368)
.+||+.||+||. |...... ..+. ..+.++.+|+.+.++... +. ...+ . +...+++|+
T Consensus 348 ~~qg~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl 423 (490)
T 2bc0_A 348 VRTGIVAAHNAC----GTDLEGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEHGNFPVTIKI 423 (490)
T ss_dssp HHHHHHHHHHHT----TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCSSCCEEEEEE
T ss_pred HHHHHHHHHHhc----CCCCCCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCCCCceEEEEE
Confidence 999999999997 3321100 0000 135677777765544211 11 1112 1 244688998
Q ss_pred cccchhHHHHHcCCCC
Q 017664 350 RDLFVGKTRKQLGLKP 365 (368)
Q Consensus 350 ~~~~~~~~~~~lG~~~ 365 (368)
++++++++|||+|+
T Consensus 424 --~~~~~~~~ilG~~~ 437 (490)
T 2bc0_A 424 --VYDKDSRRILGAQM 437 (490)
T ss_dssp --EEETTTCBEEEEEE
T ss_pred --EEECCCCEEEEEEE
Confidence 99999999999986
No 25
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-42 Score=320.95 Aligned_cols=319 Identities=25% Similarity=0.349 Sum_probs=230.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeecccccccce-eeccccc--CceeEEEe-EEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFAVRSV-INHGDYL--SNVKIVVS-TAVSI 90 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~-~~~~~ 90 (368)
..|++||||||||++||..|++ | +|+|||+++..++....+..........+.+ ....+++ .+++++.. .+..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~i 86 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLI 86 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEEE
Confidence 4699999999999999999985 8 9999999987654322222222111111111 1112222 25777766 57778
Q ss_pred ecc--EEEecCCeEEEecEEEEecCCCCCCCCchH-H------HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhh
Q 017664 91 TDT--EVVTAGGQTFVYDYVVVATGHVESVPKSRT-E------RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVD 161 (368)
Q Consensus 91 ~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~-~------~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~ 161 (368)
++. .|. .++++++||+||||||++|..|++++ + .+.+.....+.+..+++++|||+|++|+|+|..+.+
T Consensus 87 d~~~~~V~-~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~- 164 (367)
T 1xhc_A 87 DRGRKVVI-TEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAE- 164 (367)
T ss_dssp ETTTTEEE-ESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHH-
T ss_pred ECCCCEEE-ECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHh-
Confidence 754 666 67788999999999999977766542 1 123333333333356899999999999999999985
Q ss_pred CCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhh
Q 017664 162 FPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWL 241 (368)
Q Consensus 162 ~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 241 (368)
.+.+|+++++.+++++ +++++.+.+.+.+++.||++++++.|.+++. ..+.+.+|+ +++|.+|+|+|++|+.+++
T Consensus 165 -~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~~v~~~~g~-i~~D~vi~a~G~~p~~~ll 239 (367)
T 1xhc_A 165 -AGYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSELLEANE--EGVLTNSGF-IEGKVKICAIGIVPNVDLA 239 (367)
T ss_dssp -TTCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--SEEEETTEE-EECSCEEEECCEEECCHHH
T ss_pred -CCCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--eEEEECCCE-EEcCEEEECcCCCcCHHHH
Confidence 4889999999999888 8899999999999999999999999998873 378888887 9999999999999999887
Q ss_pred hccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC--ccchHHHHHHHHHHHHHHHHHHHcCCCC--CCcccc---
Q 017664 242 RETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP--EIKQGYLAQKHALVTAKNLKKLMMGRNK--GTMATY--- 314 (368)
Q Consensus 242 ~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~--~~~~~~~a~~~g~~aa~~i~~~l~g~~~--~~~~~~--- 314 (368)
+..++ ..+ +| +.||+++|| +.|||||+|||+..+ .+++++.|.+||+.||+||. |.+. ....++
T Consensus 240 ~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~----g~~~~~~~~~~~~~~ 310 (367)
T 1xhc_A 240 RRSGI--HTG-RG-ILIDDNFRT-SAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILK----GEPRRYNFKFRSTVF 310 (367)
T ss_dssp HHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHT----TCCCCCCSSCCEEEE
T ss_pred HhCCC--CCC-CC-EEECCCccc-CCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhc----CCCccCCCCCCceEE
Confidence 76665 444 45 999999998 899999999998542 23578999999999999997 3321 111111
Q ss_pred c-cCCCeEEEeecCCcceeEecCccccCccceeeeccccchhHHHHHcCCCC
Q 017664 315 K-PGYPIALVSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 315 ~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
. ..++++.+|+.+.++. ++ .+++|+ +++ +++|||+|+
T Consensus 311 ~~~~~~~~~vG~~~~~~~-~~---------~~~~k~--~~~--~~~ilG~~~ 348 (367)
T 1xhc_A 311 KFGKLQIAIIGNTKGEGK-WI---------EDNTKV--FYE--NGKIIGAVV 348 (367)
T ss_dssp EETTEEEEEEECCSSCEE-EE---------ETTEEE--EC-------CEEEE
T ss_pred EECCceEEEECCCCCCCc-cc---------ceEEEE--EEE--CCEEEEEEE
Confidence 1 2355666666665432 11 578887 776 489999986
No 26
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1e-42 Score=341.73 Aligned_cols=344 Identities=19% Similarity=0.291 Sum_probs=252.7
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCceeeeccceeeeeccccc--ccceeec-cccc--CceeEE
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEYFEITWASLRAVVEPSFA--VRSVINH-GDYL--SNVKIV 83 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~--~~~~~~ 83 (368)
+.++++||+|||||+||++||.+|+ . +.+|+|||+++.+++....+......... ...+... ..+. .++++.
T Consensus 32 ~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 32 DRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEE
T ss_pred CcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEE
Confidence 3345689999999999999999997 3 89999999999887655433332222111 1111111 1111 256653
Q ss_pred -EeEEEEeec--cEEEec---CCe--EEEecEEEEecCCCCCCCCchH----------HHHHHHHHHHHHH--hcCCeEE
Q 017664 84 -VSTAVSITD--TEVVTA---GGQ--TFVYDYVVVATGHVESVPKSRT----------ERLSQYEKDFEKV--KSANSVL 143 (368)
Q Consensus 84 -~~~~~~~~~--~~v~~~---~g~--~~~~d~lvlAtG~~~~~p~~~~----------~~~~~~~~~~~~~--~~~~~v~ 143 (368)
...+..++. +.+.+. ++. .+.||+||+|||+.|..|++++ ..+.+.......+ ..+++++
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vv 191 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHAT 191 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEE
T ss_pred ECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEE
Confidence 456777764 355442 454 7899999999999866554332 1223333322222 3589999
Q ss_pred EEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEE
Q 017664 144 IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETI 223 (368)
Q Consensus 144 VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i 223 (368)
|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.+++.+.+.+|+++
T Consensus 192 ViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i 269 (588)
T 3ics_A 192 VIGGGFIGVEMVENLRE--RGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVI 269 (588)
T ss_dssp EECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEE
T ss_pred EECCCHHHHHHHHHHHh--CCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEE
Confidence 99999999999999985 5889999999999999999999999999999999999999999998876557888999999
Q ss_pred ecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC--------ccchHHHHHHHHHHH
Q 017664 224 DTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP--------EIKQGYLAQKHALVT 295 (368)
Q Consensus 224 ~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~--------~~~~~~~a~~~g~~a 295 (368)
++|.||+|+|++|+.+++...++ .++++|++.||+++|| +.|||||+|||+..+ .+++++.|.+||+.+
T Consensus 270 ~~D~Vi~a~G~~p~~~~l~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~a 346 (588)
T 3ics_A 270 QTDMLILAIGVQPESSLAKGAGL--ALGVRGTIKVNEKFQT-SDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRML 346 (588)
T ss_dssp ECSEEEECSCEEECCHHHHHTTC--CBCGGGCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHH
T ss_pred EcCEEEEccCCCCChHHHHhcCc--eEcCCCCEEECCcccc-CCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHH
Confidence 99999999999999988776665 6788899999999999 899999999998532 135788999999999
Q ss_pred HHHHHHHHcCCCCC---Ccc--cc-ccCCCeEEEeecCCccee--------EecC----ccccCccceeeeccccchhHH
Q 017664 296 AKNLKKLMMGRNKG---TMA--TY-KPGYPIALVSLGRREGVA--------HFPF----LTISGRIPGWIKSRDLFVGKT 357 (368)
Q Consensus 296 a~~i~~~l~g~~~~---~~~--~~-~~~~~~~~~~~g~~~~~~--------~~~~----~~~~~~~~~~~k~~~~~~~~~ 357 (368)
|+||... .+.. ... .+ ...|+++.+|+++.+|.. .+.. ....+...+++|+ ++++++
T Consensus 347 a~~i~g~---~~~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--i~~~~~ 421 (588)
T 3ics_A 347 ADIIHGH---TDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIKL--IFNKDS 421 (588)
T ss_dssp HHHHTTC---CSSCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEEE--EECTTT
T ss_pred HHHhcCC---CccccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEEE--EEECCC
Confidence 9999731 2210 010 10 125778888988776532 1111 1234556789999 999999
Q ss_pred HHHcCCCC
Q 017664 358 RKQLGLKP 365 (368)
Q Consensus 358 ~~~lG~~~ 365 (368)
++|||+|+
T Consensus 422 ~~ilG~~~ 429 (588)
T 3ics_A 422 GKIYGAQT 429 (588)
T ss_dssp CBEEEEEE
T ss_pred CeEEEEEE
Confidence 99999986
No 27
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.6e-43 Score=336.38 Aligned_cols=336 Identities=21% Similarity=0.253 Sum_probs=246.3
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeecccee--------------------ee----ec---cccc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLR--------------------AV----VE---PSFA 66 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~--------------------~~----~~---~~~~ 66 (368)
.++||+||||||||+++|.+|++ |++|+|||+++.+|+.|.... .. .. ..+.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 45899999999999999999984 999999999987664431100 00 00 0000
Q ss_pred ccceee------------ccccc--CceeEEEeEEEEeeccE--EEecC-C-eEEEecEEEEecCCCCCCCCch---HHH
Q 017664 67 VRSVIN------------HGDYL--SNVKIVVSTAVSITDTE--VVTAG-G-QTFVYDYVVVATGHVESVPKSR---TER 125 (368)
Q Consensus 67 ~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~--v~~~~-g-~~~~~d~lvlAtG~~~~~p~~~---~~~ 125 (368)
...+.. ..+++ .+++++...+..++++. +.+.+ + +.++||+||+|||+.|..|+++ ...
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~ 164 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDT 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCc
Confidence 000000 01111 26788888887777764 44445 4 5799999999999997665532 222
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecce
Q 017664 126 LSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQS 204 (368)
Q Consensus 126 ~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~ 204 (368)
+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++ .+++++...+.+.+++.||++++++.
T Consensus 165 v~t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~ 242 (474)
T 1zmd_A 165 IVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQR--LGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTK 242 (474)
T ss_dssp EECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEE
T ss_pred EEcHHHHhhccccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCce
Confidence 22333322222347899999999999999999985 4889999999999998 88999999999999999999999999
Q ss_pred eeecccCCC---eEE-----cCCCcEEecCEEEEccCCCCCchh--hhccccccccCCCCcEEeCCCeeecCCCCeEEec
Q 017664 205 VTLNTISDG---LIE-----TSSGETIDTDCHFMCTGKAMASSW--LRETILKDSLDGRGRLMVDENLRVRGFKNVFAIG 274 (368)
Q Consensus 205 v~~i~~~~~---~v~-----~~~g~~i~~d~vi~a~G~~p~~~~--~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~G 274 (368)
|.+++.+++ .+. ..+++++++|.||+|+|++|+.++ +...++ .++++|+|.||+++|| +.|+|||+|
T Consensus 243 v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~~~~IyA~G 319 (474)
T 1zmd_A 243 VTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGI--ELDPRGRIPVNTRFQT-KIPNIYAIG 319 (474)
T ss_dssp EEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTC--CCCTTSCCCCCTTCBC-SSTTEEECG
T ss_pred EEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCC--ccCCCCCEEECcCCcc-CCCCEEEee
Confidence 999986653 333 356678999999999999999887 444444 6778899999999998 899999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc--
Q 017664 275 DITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-- 337 (368)
Q Consensus 275 D~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-- 337 (368)
||++.+ ++++.|.+||+.||+||. |++. + ..|. ..|+++.+|+.+.++.. .+++.
T Consensus 320 D~~~~~--~~~~~A~~~g~~aa~~i~----~~~~-~-~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~ 391 (474)
T 1zmd_A 320 DVVAGP--MLAHKAEDEGIICVEGMA----GGAV-H-IDYNCVPSVIYTHPEVAWVGKSEEQLKEEGIEYKVGKFPFAAN 391 (474)
T ss_dssp GGSSSC--CCHHHHHHHHHHHHHHHT----TCCC-C-CCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGC
T ss_pred ecCCCC--ccHHHHHHHHHHHHHHhc----CCCC-c-CCCCCCCEEEECCCCeEEEeCCHHHHHhcCCCEEEEEEecccc
Confidence 999764 378899999999999997 3321 1 1221 25778888887766532 12221
Q ss_pred ---cccCccceeeeccccchhHHHHHcCCCC
Q 017664 338 ---TISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 338 ---~~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
...+...+++|+ ++++++++|||+|+
T Consensus 392 ~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~ 420 (474)
T 1zmd_A 392 SRAKTNADTDGMVKI--LGQKSTDRVLGAHI 420 (474)
T ss_dssp HHHHHTTCCCCEEEE--EEETTTCBEEEEEE
T ss_pred hhhhhcCCCcEEEEE--EEECCCCEEEEEEE
Confidence 134556789999 99999999999986
No 28
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=5.4e-43 Score=334.58 Aligned_cols=342 Identities=19% Similarity=0.247 Sum_probs=246.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce---------------------eee--e---cccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL---------------------RAV--V---EPSF 65 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~---------------------~~~--~---~~~~ 65 (368)
|+.++||+|||||++|+++|.+|+ .|++|+|||+++ +|..|... ... + ....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 456789999999999999999998 499999999984 44322100 000 0 0000
Q ss_pred cccce-----------e--eccccc---CceeEEEeEEEEeeccE--EEecCC--eEEEecEEEEecCCCCCCCCchH--
Q 017664 66 AVRSV-----------I--NHGDYL---SNVKIVVSTAVSITDTE--VVTAGG--QTFVYDYVVVATGHVESVPKSRT-- 123 (368)
Q Consensus 66 ~~~~~-----------~--~~~~~~---~~~~~~~~~~~~~~~~~--v~~~~g--~~~~~d~lvlAtG~~~~~p~~~~-- 123 (368)
....+ . ...+++ .+++++.+++..++++. +.+.+| ..++||+||+|||+.|..|++++
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~ 159 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLK 159 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCC
Confidence 00000 0 011122 27888888888888764 455677 78999999999999876665432
Q ss_pred -HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEec
Q 017664 124 -ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILN 202 (368)
Q Consensus 124 -~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~ 202 (368)
..+.+.....+....+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++ +++++.+.+.+.+++.||+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~ 236 (467)
T 1zk7_A 160 ESPYWTSTEALASDTIPERLAVIGSSVVALELAQAFAR--LGSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEH 236 (467)
T ss_dssp TSCCBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETT
T ss_pred cCceecHHHHhcccccCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcC
Confidence 1222333333333457999999999999999999985 4889999999999998 89999999999999999999999
Q ss_pred ceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC
Q 017664 203 QSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP 280 (368)
Q Consensus 203 ~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~ 280 (368)
+.|.+++.+++ .+.++ +.++++|.||+|+|.+|+.+++....+++.++++|+|.||+++|+ +.|+|||+|||+..+
T Consensus 237 ~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~~ 314 (467)
T 1zk7_A 237 TQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTDQP 314 (467)
T ss_dssp CCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBSSC
T ss_pred CEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCCCc
Confidence 99999876554 45665 458999999999999999876432333446778899999999998 899999999999865
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHcCCCC-CCcc--ccccCCCeEEEeecCCccee--------EecCcc-----ccCccc
Q 017664 281 EIKQGYLAQKHALVTAKNLKKLMMGRNK-GTMA--TYKPGYPIALVSLGRREGVA--------HFPFLT-----ISGRIP 344 (368)
Q Consensus 281 ~~~~~~~a~~~g~~aa~~i~~~l~g~~~-~~~~--~~~~~~~~~~~~~g~~~~~~--------~~~~~~-----~~~~~~ 344 (368)
. +++.|.+||+.+|.||... ..... ...+ .| ..+.++.+|+.+.++.. .+++.. ..+...
T Consensus 315 ~--~~~~A~~~g~~aa~~i~~~-~~~~~~~~~p~~~~-~~~~~a~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 390 (467)
T 1zk7_A 315 Q--FVYVAAAAGTRAAINMTGG-DAALDLTAMPAVVF-TDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTR 390 (467)
T ss_dssp C--CHHHHHHHHHHHHHHHTTC-CCCCCCTTCEEEEC-SSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCC
T ss_pred c--cHHHHHHHHHHHHHHHcCC-CcccCCCCCCEEEe-cCCceEEEecCHHHHHhcCCCeEEEEEecccchhhhhcCCCc
Confidence 4 6889999999999999731 10000 0111 12 24677888877655421 122211 234557
Q ss_pred eeeeccccchhHHHHHcCCCCC
Q 017664 345 GWIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 345 ~~~k~~~~~~~~~~~~lG~~~~ 366 (368)
+++|+ ++++++++|||+|+.
T Consensus 391 ~~~kl--~~~~~~~~ilG~~~~ 410 (467)
T 1zk7_A 391 GFIKL--VIEEGSHRLIGVQAV 410 (467)
T ss_dssp CEEEE--EEETTTCBEEEEEEE
T ss_pred EEEEE--EEECCCCEEEEEEEE
Confidence 89998 999999999999863
No 29
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.7e-42 Score=329.82 Aligned_cols=335 Identities=18% Similarity=0.224 Sum_probs=243.9
Q ss_pred CcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCceeeeccceeeeecccc----cccceeeccccc--CceeEEEe-E
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEYFEITWASLRAVVEPSF----AVRSVINHGDYL--SNVKIVVS-T 86 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~-~ 86 (368)
+||+|||||+||+++|.+|+ . |.+|+|||+++.+++....+........ ..+......+++ .+++++.. .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 80 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQ 80 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCE
Confidence 58999999999999999997 3 9999999999876554332221111110 111111111111 25677444 5
Q ss_pred EEEee--ccEEEecC-----CeEEEecEEEEecCCCCCCCCchH---H------HHHHHHHHHHHHhcCCeEEEEcCchh
Q 017664 87 AVSIT--DTEVVTAG-----GQTFVYDYVVVATGHVESVPKSRT---E------RLSQYEKDFEKVKSANSVLIVGGGPT 150 (368)
Q Consensus 87 ~~~~~--~~~v~~~~-----g~~~~~d~lvlAtG~~~~~p~~~~---~------~~~~~~~~~~~~~~~~~v~VvG~g~~ 150 (368)
+..++ .+.+.+.+ +..++||+||+|||++|..|++++ . .+.+.....+....+++++|||+|++
T Consensus 81 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~ 160 (452)
T 2cdu_A 81 VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYI 160 (452)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCSHH
T ss_pred EEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcCHH
Confidence 67776 44665543 467999999999999976665432 1 23344445555567899999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecC
Q 017664 151 GVELAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTD 226 (368)
Q Consensus 151 ~~e~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d 226 (368)
|+|+|..+.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.+++ .+.+ +|+++++|
T Consensus 161 g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D 237 (452)
T 2cdu_A 161 GAELAEAYSN--QNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSD 237 (452)
T ss_dssp HHHHHHHHHT--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEES
T ss_pred HHHHHHHHHh--cCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECC
Confidence 9999999984 5889999999999988 78999999999999999999999999999886444 2444 77899999
Q ss_pred EEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHH
Q 017664 227 CHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKN 298 (368)
Q Consensus 227 ~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~ 298 (368)
.||+|+|++|+.+++... + .++++|+|.||+++|| +.|||||+|||+..+. +.+++.|.+||+.||+|
T Consensus 238 ~vv~a~G~~p~~~ll~~~-l--~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~ 313 (452)
T 2cdu_A 238 IAILCIGFRPNTELLKGK-V--AMLDNGAIITDEYMHS-SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLN 313 (452)
T ss_dssp EEEECCCEEECCGGGTTT-S--CBCTTSCBCCCTTSBC-SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHT
T ss_pred EEEECcCCCCCHHHHHHh-h--hcCCCCCEEECCCcCc-CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHH
Confidence 999999999999887654 4 6778899999999999 8999999999998532 25789999999999999
Q ss_pred HHHHHcCCCCCCcccc-----c--cCCCeEEEeecCCcceeE--------ec---Cccc-cCccceeeeccccchhHHHH
Q 017664 299 LKKLMMGRNKGTMATY-----K--PGYPIALVSLGRREGVAH--------FP---FLTI-SGRIPGWIKSRDLFVGKTRK 359 (368)
Q Consensus 299 i~~~l~g~~~~~~~~~-----~--~~~~~~~~~~g~~~~~~~--------~~---~~~~-~~~~~~~~k~~~~~~~~~~~ 359 (368)
|. |.+.. ...+ . ..++++.+|+.+.++... +. ...+ .+...+++|+ ++++++++
T Consensus 314 i~----g~~~~-~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~ 386 (452)
T 2cdu_A 314 LT----EDKVK-DMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSL--VYDPKTRV 386 (452)
T ss_dssp SS----SCCCC-CCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEE--EECTTTCB
T ss_pred hC----CCCCc-CCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEE--EEECCCCE
Confidence 97 33211 1111 0 135677777766544321 11 1111 2444688998 99999999
Q ss_pred HcCCCC
Q 017664 360 QLGLKP 365 (368)
Q Consensus 360 ~lG~~~ 365 (368)
|||+|+
T Consensus 387 ilG~~~ 392 (452)
T 2cdu_A 387 ILGGAL 392 (452)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 30
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=7.1e-43 Score=337.18 Aligned_cols=344 Identities=15% Similarity=0.156 Sum_probs=243.8
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC--------ceeeeccce---e---------------ee---
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE--------YFEITWASL---R---------------AV--- 60 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~--------~~~~~~~~~---~---------------~~--- 60 (368)
++++.++||+||||||||++||.+|+ .|.+|+|||+++ .+|+.+... . ..
T Consensus 27 ~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 27 LPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp CCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 44556789999999999999999998 599999999964 344322110 0 00
Q ss_pred -e----cccccccceeecc------------c--ccCceeEEEeEEEEeeccEEE--ecCCe--EEEecEEEEecCCCCC
Q 017664 61 -V----EPSFAVRSVINHG------------D--YLSNVKIVVSTAVSITDTEVV--TAGGQ--TFVYDYVVVATGHVES 117 (368)
Q Consensus 61 -~----~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~v~--~~~g~--~~~~d~lvlAtG~~~~ 117 (368)
. ...+....+..+. . ...+++++.+.+..++++.+. +.+|. .++||+||||||+.|.
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 0 0000000000000 0 013688899999999987554 34453 7999999999999988
Q ss_pred CCCchHHH--HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcC
Q 017664 118 VPKSRTER--LSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSK 195 (368)
Q Consensus 118 ~p~~~~~~--~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~ 195 (368)
.|++++.. +.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++. .+++.+++++.+.+.+.+++.
T Consensus 187 ~p~i~G~~~~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~--~G~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~ 263 (519)
T 3qfa_A 187 YLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAG--IGLDVTVMVRS-ILLRGFDQDMANKIGEHMEEH 263 (519)
T ss_dssp CCCCTTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHT
T ss_pred CCCCCCccCceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEecc-cccccCCHHHHHHHHHHHHHC
Confidence 87765422 11222222222347889999999999999999986 48899999985 688888999999999999999
Q ss_pred CcEEEecceeeecccCC----C--eE--EcCCC-c--EEecCEEEEccCCCCCchhhhccccccccC-CCCcEEeCCCee
Q 017664 196 KVEVILNQSVTLNTISD----G--LI--ETSSG-E--TIDTDCHFMCTGKAMASSWLRETILKDSLD-GRGRLMVDENLR 263 (368)
Q Consensus 196 gv~i~~~~~v~~i~~~~----~--~v--~~~~g-~--~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~-~~g~i~vd~~~~ 263 (368)
||++++++.+.+++..+ + .+ ...+| + ++++|.|++|+|++|+.+++....+++.++ ++|+|.||+++|
T Consensus 264 GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~ 343 (519)
T 3qfa_A 264 GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQ 343 (519)
T ss_dssp TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCCTTSB
T ss_pred CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeCCCCc
Confidence 99999998777665321 2 22 33455 2 578999999999999998754444455777 579999999999
Q ss_pred ecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC-------ccccccCCCeEEEeecCCcceeEe--
Q 017664 264 VRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGT-------MATYKPGYPIALVSLGRREGVAHF-- 334 (368)
Q Consensus 264 ~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~-- 334 (368)
| +.|||||+|||+.. .+++++.|.+||+.||+||+ |..... ...| ..|+++.+|+++++|...+
T Consensus 344 T-s~~~IyA~GD~~~g-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~~~ 416 (519)
T 3qfa_A 344 T-NVPYIYAIGDILED-KVELTPVAIQAGRLLAQRLY----AGSTVKCDYENVPTTVF-TPLEYGACGLSEEKAVEKFGE 416 (519)
T ss_dssp C-SSTTEEECGGGBSS-SCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEEC-SSSCEEEEECCHHHHHHHHCG
T ss_pred c-CCCCEEEEEeccCC-CCccHHHHHHHHHHHHHHHc----CCCCccCCCCcCcEEEE-CCCceEEecCCHHHHHhhCCC
Confidence 8 89999999999842 24478999999999999998 332111 1112 2588999999988775321
Q ss_pred --------cCcc----c--cCccceeeeccccchh-HHHHHcCCCCC
Q 017664 335 --------PFLT----I--SGRIPGWIKSRDLFVG-KTRKQLGLKPT 366 (368)
Q Consensus 335 --------~~~~----~--~~~~~~~~k~~~~~~~-~~~~~lG~~~~ 366 (368)
.+.. . .+...+++|+ ++++ ++++|||+|+.
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~g~~Kl--i~~~~~~~~ilGa~i~ 461 (519)
T 3qfa_A 417 ENIEVYHSYFWPLEWTIPSRDNNKCYAKI--ICNTKDNERVVGFHVL 461 (519)
T ss_dssp GGEEEEEEEECCHHHHTTTCCTTTEEEEE--EEETTTTCEEEEEEEE
T ss_pred CCEEEEEEeccchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEEE
Confidence 1111 1 1235789998 9997 58999999863
No 31
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.8e-43 Score=334.51 Aligned_cols=337 Identities=21% Similarity=0.275 Sum_probs=243.8
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce------------------ee----ee---cccccccc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL------------------RA----VV---EPSFAVRS 69 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~------------------~~----~~---~~~~~~~~ 69 (368)
++||+|||||+||+++|.+|+ .|++|+|||++ .+++.+... .. .. ........
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 579999999999999999998 49999999998 444322100 00 00 00000000
Q ss_pred eee------------cccc--cCceeEEEeEEEEeeccE--EEecCC-eEEEecEEEEecCCCCCCCCchH--HHHHHHH
Q 017664 70 VIN------------HGDY--LSNVKIVVSTAVSITDTE--VVTAGG-QTFVYDYVVVATGHVESVPKSRT--ERLSQYE 130 (368)
Q Consensus 70 ~~~------------~~~~--~~~~~~~~~~~~~~~~~~--v~~~~g-~~~~~d~lvlAtG~~~~~p~~~~--~~~~~~~ 130 (368)
+.. ..++ ..+++++.+.+..++++. +.+.++ ..++||+||+|||+.|..|++.. ..+.+..
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~ 161 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDST 161 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHH
Confidence 000 0011 126788888877777764 445566 67999999999999976665321 1122233
Q ss_pred HHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeeccc
Q 017664 131 KDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTI 210 (368)
Q Consensus 131 ~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 210 (368)
........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++...+.+.+++.||++++++.|.+++.
T Consensus 162 ~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 239 (455)
T 1ebd_A 162 GALNLGEVPKSLVVIGGGYIGIELGTAYAN--FGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEE 239 (455)
T ss_dssp HHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEE
T ss_pred HHhccccCCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 322222347999999999999999999985 488999999999999988999999999999999999999999999886
Q ss_pred CCC--eEEcC---CCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchH
Q 017664 211 SDG--LIETS---SGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQG 285 (368)
Q Consensus 211 ~~~--~v~~~---~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~ 285 (368)
+++ .+.+. +++++++|.+|+|+|++|+.+++....+++.++++|+|.||+++|| +.|+|||+|||++.+ +++
T Consensus 240 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~ 316 (455)
T 1ebd_A 240 REDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVPGP--ALA 316 (455)
T ss_dssp ETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSSSC--CCH
T ss_pred eCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCCCc--ccH
Confidence 554 34443 4568999999999999999887432333446778899999999998 899999999999764 378
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----cccCccce
Q 017664 286 YLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----TISGRIPG 345 (368)
Q Consensus 286 ~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~~~~~~~~ 345 (368)
+.|.+||+.||+||. |++.. ..|. ..|+++.+|+++.++.. .+++. ...+...+
T Consensus 317 ~~A~~~g~~aa~~i~----~~~~~--~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (455)
T 1ebd_A 317 HKASYEGKVAAEAIA----GHPSA--VDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDG 390 (455)
T ss_dssp HHHHHHHHHHHHHHT----SCCCC--CCCSCCCEEECSSSCEEEEECCHHHHHTTTCCEEEEEEEGGGCHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHc----CCCcc--CCCCCCCEEEECCCceEEEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcE
Confidence 899999999999997 33211 1121 24778888888765532 12221 12355678
Q ss_pred eeeccccchhHHHHHcCCCCC
Q 017664 346 WIKSRDLFVGKTRKQLGLKPT 366 (368)
Q Consensus 346 ~~k~~~~~~~~~~~~lG~~~~ 366 (368)
++|+ ++++++++|||+|+.
T Consensus 391 ~~k~--~~~~~~~~ilG~~~~ 409 (455)
T 1ebd_A 391 FLKL--VVRKEDGVIIGAQII 409 (455)
T ss_dssp EEEE--EEETTTTEEEEEEEE
T ss_pred EEEE--EEECCCCEEEEEEEe
Confidence 9998 999999999999863
No 32
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=4.5e-42 Score=335.98 Aligned_cols=338 Identities=19% Similarity=0.273 Sum_probs=247.7
Q ss_pred CcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeeccccc--ccceeeccccc---CceeEE-EeEE
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFA--VRSVINHGDYL---SNVKIV-VSTA 87 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~-~~~~ 87 (368)
+||+|||||+||++||.+|++ +++|+|||+++.+++....+......... ...+....+++ .++++. ..++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 689999999999999999973 89999999999887654433332222111 11111111111 156653 4677
Q ss_pred EEeecc--EEEecC---C--eEEEecEEEEecCCCCCCCCchH---------HHHHHHHHHHHH--HhcCCeEEEEcCch
Q 017664 88 VSITDT--EVVTAG---G--QTFVYDYVVVATGHVESVPKSRT---------ERLSQYEKDFEK--VKSANSVLIVGGGP 149 (368)
Q Consensus 88 ~~~~~~--~v~~~~---g--~~~~~d~lvlAtG~~~~~p~~~~---------~~~~~~~~~~~~--~~~~~~v~VvG~g~ 149 (368)
..++.. .+.+.+ + ..+.||+||+|||+.|..|++++ ..+.+.....+. ...+++++|||+|+
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ 161 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGF 161 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCH
Confidence 777743 454432 4 37899999999999866554321 122333333222 23478999999999
Q ss_pred hHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeeccc-------------------
Q 017664 150 TGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTI------------------- 210 (368)
Q Consensus 150 ~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~------------------- 210 (368)
+|+|+|..+.+ .+.+|+++++.+++++.+++++...+.+.+++.||++++++.+.+++.
T Consensus 162 ~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 239 (565)
T 3ntd_A 162 IGLEMMESLHH--LGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQH 239 (565)
T ss_dssp HHHHHHHHHHH--TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCC
T ss_pred HHHHHHHHHHh--cCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccccccccccccccc
Confidence 99999999985 488999999999999989999999999999999999999999998876
Q ss_pred CCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC--------
Q 017664 211 SDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-------- 280 (368)
Q Consensus 211 ~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~-------- 280 (368)
.++ .+.+.+|+++++|.||+|+|++|+.+++...++ .++++|++.||+++|| +.|||||+|||+..+
T Consensus 240 ~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~--~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~ 316 (565)
T 3ntd_A 240 IKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGL--AIGELGGIKVNAMMQT-SDPAIYAVGDAVEEQDFVTGQAC 316 (565)
T ss_dssp TTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTC--CBCTTSSBCCCTTCBC-SSTTEEECGGGBCEEBTTTCCEE
T ss_pred CCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCc--ccCCCCCEEECCCccc-CCCCEEEeeeeEeeccccCCcee
Confidence 233 567788889999999999999999888766555 6788899999999998 899999999998432
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHcCCCCCC---cccc---ccCCCeEEEeecCCcceeE--------ec---Cccc-cCc
Q 017664 281 EIKQGYLAQKHALVTAKNLKKLMMGRNKGT---MATY---KPGYPIALVSLGRREGVAH--------FP---FLTI-SGR 342 (368)
Q Consensus 281 ~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~---~~~~---~~~~~~~~~~~g~~~~~~~--------~~---~~~~-~~~ 342 (368)
.+++++.|.+||+.||+||. |++... ...+ ...++++.+|+.+.+|... +. ...+ .+.
T Consensus 317 ~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 392 (565)
T 3ntd_A 317 LVPLAGPANRQGRMAADNMF----GREERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYVHTASHASYYPGA 392 (565)
T ss_dssp CCCCHHHHHHHHHHHHHHHT----TCCCCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTC
T ss_pred ecccHHHHHHHHHHHHHHhc----CCCccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEEecCcccCcCCCC
Confidence 12468899999999999998 432211 0000 1246788888887765321 11 1112 366
Q ss_pred cceeeeccccchhHHHHHcCCCC
Q 017664 343 IPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 343 ~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
..+++|+ ++++++++|||+|+
T Consensus 393 ~~~~~k~--v~~~~~~~ilG~~~ 413 (565)
T 3ntd_A 393 EVVSFKL--LFDPVKGTIFGAQA 413 (565)
T ss_dssp CEEEEEE--EECTTTCBEEEEEE
T ss_pred ceEEEEE--EEECCCCEEEEEEE
Confidence 6789999 99999999999986
No 33
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.2e-43 Score=335.14 Aligned_cols=339 Identities=18% Similarity=0.263 Sum_probs=246.4
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceee-----------------------ee---ccccc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRA-----------------------VV---EPSFA 66 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~-----------------------~~---~~~~~ 66 (368)
+.++||+||||||||+++|.+|++ |++|+|||+++.+|+.+..... .. .....
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 456899999999999999999985 9999999999776644311000 00 00000
Q ss_pred ccceee------------ccccc--CceeEEEeEEEEeeccEEE--ecCC--eEEEecEEEEecCCCCCCCCch---HHH
Q 017664 67 VRSVIN------------HGDYL--SNVKIVVSTAVSITDTEVV--TAGG--QTFVYDYVVVATGHVESVPKSR---TER 125 (368)
Q Consensus 67 ~~~~~~------------~~~~~--~~~~~~~~~~~~~~~~~v~--~~~g--~~~~~d~lvlAtG~~~~~p~~~---~~~ 125 (368)
...+.. ..+++ .+++++.+....++++.+. +.+| ..++||+||+|||+.|..|++. ...
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~ 163 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKK 163 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCccc
Confidence 000000 00111 2577877777777776443 3456 7899999999999997666532 212
Q ss_pred HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEeccee
Q 017664 126 LSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 126 ~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|
T Consensus 164 v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v 241 (470)
T 1dxl_A 164 IVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGR--IGSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKV 241 (470)
T ss_dssp EECHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHH--HTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEE
T ss_pred EEeHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 22333322222347999999999999999999986 4789999999999999899999999999999999999999999
Q ss_pred eecccCCC--eEEcC---CC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCC
Q 017664 206 TLNTISDG--LIETS---SG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITD 278 (368)
Q Consensus 206 ~~i~~~~~--~v~~~---~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~ 278 (368)
.+++.+++ .+.+. +| +++++|.+|+|+|++|+.+++....+++.++++|+|.||+++|| +.|+|||+|||++
T Consensus 242 ~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 242 VGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIP 320 (470)
T ss_dssp EEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSS
T ss_pred EEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCC
Confidence 99987654 44443 44 68999999999999999988433333446777899999999998 8999999999997
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----c
Q 017664 279 IPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----T 338 (368)
Q Consensus 279 ~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~ 338 (368)
.+ ++++.|.+||+.||+||. |++. + ..|. ..|+++.+|+++.++.. .+++. .
T Consensus 321 ~~--~~~~~A~~~g~~aa~~i~----g~~~-~-~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~ 392 (470)
T 1dxl_A 321 GP--MLAHKAEEDGVACVEYLA----GKVG-H-VDYDKVPGVVYTNPEVASVGKTEEQVKETGVEYRVGKFPFMANSRAK 392 (470)
T ss_dssp SC--CCHHHHHHHHHHHHHHHT----TSCC-C-CCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHH
T ss_pred CC--ccHHHHHHHHHHHHHHHc----CCCc-C-CCCCCCCEEEECCCceEEEcCCHHHHHhcCCcEEEEEEecccchHHH
Confidence 64 378899999999999997 3321 1 1221 24678888887765532 12221 1
Q ss_pred ccCccceeeeccccchhHHHHHcCCCC
Q 017664 339 ISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 339 ~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
..+...+++|+ ++++++++|||+|+
T Consensus 393 ~~~~~~~~~k~--~~~~~~~~ilG~~~ 417 (470)
T 1dxl_A 393 AIDNAEGLVKI--IAEKETDKILGVHI 417 (470)
T ss_dssp HHSCCCCEEEE--EEETTTCBEEEEEE
T ss_pred hcCCCcEEEEE--EEECCCCEEEEEEE
Confidence 23556789999 99999999999986
No 34
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.8e-43 Score=333.60 Aligned_cols=335 Identities=19% Similarity=0.264 Sum_probs=242.2
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccc--------e----------e-ee----e--cccccccc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWAS--------L----------R-AV----V--EPSFAVRS 69 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~--------~----------~-~~----~--~~~~~~~~ 69 (368)
++||+||||||||+++|..|++ |++|+|||++. ++..+.. + . .. . ........
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 5799999999999999999984 99999999983 3322100 0 0 00 0 00000000
Q ss_pred eee------------ccccc--CceeEEEeEEEEeecc--EEEecCC--eEEEecEEEEecCCCCCCCCchH--HHHHHH
Q 017664 70 VIN------------HGDYL--SNVKIVVSTAVSITDT--EVVTAGG--QTFVYDYVVVATGHVESVPKSRT--ERLSQY 129 (368)
Q Consensus 70 ~~~------------~~~~~--~~~~~~~~~~~~~~~~--~v~~~~g--~~~~~d~lvlAtG~~~~~p~~~~--~~~~~~ 129 (368)
... ..+++ .+++++......++.+ .+.+.+| ..++||+||+|||+.|..|++.. ..+.+.
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~ 161 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTY 161 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEec
Confidence 000 00111 2677777776666665 3455567 78999999999999976554321 112233
Q ss_pred HHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecc
Q 017664 130 EKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNT 209 (368)
Q Consensus 130 ~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 209 (368)
.........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.+.+++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (464)
T 2a8x_A 162 EEQILSRELPKSIIIAGAGAIGMEFGYVLKN--YGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIA 239 (464)
T ss_dssp HHHHTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEE
T ss_pred HHHhhccccCCeEEEECCcHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEE
Confidence 3322222347899999999999999999985 48899999999999999999999999999999999999999999998
Q ss_pred cCCC--eEEcC-CC--cEEecCEEEEccCCCCCchh--hhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCcc
Q 017664 210 ISDG--LIETS-SG--ETIDTDCHFMCTGKAMASSW--LRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEI 282 (368)
Q Consensus 210 ~~~~--~v~~~-~g--~~i~~d~vi~a~G~~p~~~~--~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~ 282 (368)
.+++ .+.+. +| +++++|.+|+|+|++|+.++ +...++ .++++|+|.||+++|| +.|||||+|||++.+
T Consensus 240 ~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl--~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~~~-- 314 (464)
T 2a8x_A 240 DGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGV--ALTDRKAIGVDDYMRT-NVGHIYAIGDVNGLL-- 314 (464)
T ss_dssp ECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTC--CBCTTSSBCCCTTSBC-SSTTEEECGGGGCSS--
T ss_pred EcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCC--ccCCCCCEeECcCCcc-CCCCEEEeECcCCCc--
Confidence 7654 44543 56 68999999999999999887 444444 6777899999999998 899999999999864
Q ss_pred chHHHHHHHHHHHHHHHHHHHcC-CCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----cccC
Q 017664 283 KQGYLAQKHALVTAKNLKKLMMG-RNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----TISG 341 (368)
Q Consensus 283 ~~~~~a~~~g~~aa~~i~~~l~g-~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~~~~ 341 (368)
++++.|.+||+.||+||. | .+. +...|. ..|+++.+|+++.++.. .+++. ...+
T Consensus 315 ~~~~~A~~~g~~aa~~i~----g~~~~-~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~ 389 (464)
T 2a8x_A 315 QLAHVAEAQGVVAAETIA----GAETL-TLGDHRMLPRATFCQPNVASFGLTEQQARNEGYDVVVAKFPFTANAKAHGVG 389 (464)
T ss_dssp CSHHHHHHHHHHHHHHHH----TCCCC-CCCCGGGSCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHhc----CCCCc-ccCCCCCCCEEEECCCCeEEEcCCHHHHHhcCCCEEEEEEEcchhhhhhhcC
Confidence 378899999999999998 4 221 101221 24678888887765532 12221 1235
Q ss_pred ccceeeeccccchhHHHHHcCCCC
Q 017664 342 RIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 342 ~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
...+++|+ ++++++++|||+|+
T Consensus 390 ~~~~~~k~--~~~~~~~~ilG~~~ 411 (464)
T 2a8x_A 390 DPSGFVKL--VADAKHGELLGGHL 411 (464)
T ss_dssp CCCCEEEE--EEETTTTEEEEEEE
T ss_pred CCcEEEEE--EEECCCCEEEEEEE
Confidence 56789998 99999999999986
No 35
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=4.5e-42 Score=329.44 Aligned_cols=340 Identities=16% Similarity=0.150 Sum_probs=243.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC---------ceeeecccee------------------e---e-e
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE---------YFEITWASLR------------------A---V-V 61 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~---------~~~~~~~~~~------------------~---~-~ 61 (368)
+.++||+||||||||++||.+|+ .|++|+|||+.+ .+|+.+.... . + .
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 45799999999999999999998 599999999421 1333221100 0 0 0
Q ss_pred ----cccccccceeecc------------c--ccCceeEEEeEEEEeeccEE--EecCC-eEEEecEEEEecCCCCCCCC
Q 017664 62 ----EPSFAVRSVINHG------------D--YLSNVKIVVSTAVSITDTEV--VTAGG-QTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 62 ----~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~~d~lvlAtG~~~~~p~ 120 (368)
........+..+. . ...+++++.+.+..++++.+ .+.++ ..++||+||||||+.|..|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~ 166 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPD 166 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCS
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCC
Confidence 0000000000000 0 01367888888888887754 44455 47999999999999987776
Q ss_pred chHHHH--HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcE
Q 017664 121 SRTERL--SQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVE 198 (368)
Q Consensus 121 ~~~~~~--~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 198 (368)
+++... .+..........+++++|||+|++|+|+|..+.+ .+.+|+++++. .+++.+++++.+.+.+.+++.||+
T Consensus 167 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~Gv~ 243 (483)
T 3dgh_A 167 IPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKG--LGYEPTVMVRS-IVLRGFDQQMAELVAASMEERGIP 243 (483)
T ss_dssp STTHHHHCBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCC
T ss_pred CCCcccccCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHH--cCCEEEEEeCC-CCCcccCHHHHHHHHHHHHhCCCE
Confidence 654321 1222222222347899999999999999999985 48899999984 678888999999999999999999
Q ss_pred EEecceeeecccCCC---eEEcCCCc-----EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCe
Q 017664 199 VILNQSVTLNTISDG---LIETSSGE-----TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNV 270 (368)
Q Consensus 199 i~~~~~v~~i~~~~~---~v~~~~g~-----~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~i 270 (368)
+++++.+.+++.+++ .+.+.+++ ++++|.+|+|+|++|+.+++....+++.+++ |++.||+++|| +.|||
T Consensus 244 i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~I 321 (483)
T 3dgh_A 244 FLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANI 321 (483)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTE
T ss_pred EEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEECcCCcc-CCCCE
Confidence 999999998876433 46655543 7999999999999999988754445557777 99999999998 89999
Q ss_pred EEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCc-------cccccCCCeEEEeecCCcceeEe---------
Q 017664 271 FAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTM-------ATYKPGYPIALVSLGRREGVAHF--------- 334 (368)
Q Consensus 271 fa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~--------- 334 (368)
||+|||+.. .+++++.|.+||+.+|+||+ |...... ..| ..|+++.+|+++.+|..+.
T Consensus 322 yA~GD~~~~-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~~~~~~~~~~ 395 (483)
T 3dgh_A 322 YAVGDIIYG-KPELTPVAVLAGRLLARRLY----GGSTQRMDYKDVATTVF-TPLEYACVGLSEEDAVKQFGADEIEVFH 395 (483)
T ss_dssp EECSTTBTT-SCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEEC-SSSEEEEEECCHHHHHHHHCGGGEEEEE
T ss_pred EEEEcccCC-CCccHHHHHHHHHHHHHHHc----CCCCCcCCCCCCCEEEE-CCCccEEEeCCHHHHHhhCCCCCEEEEE
Confidence 999999843 24478999999999999998 4321110 112 2578899999987765321
Q ss_pred -cCcc----c--cCccceeeeccccchhH-HHHHcCCCCC
Q 017664 335 -PFLT----I--SGRIPGWIKSRDLFVGK-TRKQLGLKPT 366 (368)
Q Consensus 335 -~~~~----~--~~~~~~~~k~~~~~~~~-~~~~lG~~~~ 366 (368)
.+.. + .+...+++|+ +++++ +++|||+|+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~k~--i~~~~~~~~ilG~~~~ 433 (483)
T 3dgh_A 396 GYYKPTEFFIPQKSVRYCYLKA--VAERHGDQRVYGLHYI 433 (483)
T ss_dssp EECCCGGGTTTTCCCTTCEEEE--EEESSTTCBEEEEEEE
T ss_pred EeecchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEEE
Confidence 1111 1 1235689998 99987 9999999863
No 36
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-42 Score=334.74 Aligned_cols=337 Identities=19% Similarity=0.228 Sum_probs=247.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-c---CCcEEEEcCCCceeeeccce---e---------------ee--------ec-cc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S---FADVVLIDEKEYFEITWASL---R---------------AV--------VE-PS 64 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~---g~~v~lie~~~~~~~~~~~~---~---------------~~--------~~-~~ 64 (368)
++||+|||||+||+++|.+|+ . |++|+|||+++ +|+.+... . .. .. ..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 479999999999999999997 5 89999999997 54321100 0 00 00 00
Q ss_pred ccccceee------------ccccc--CceeEEEeEEEEeec------cE--EEecCCe--EEEecEEEEecCCCCCCCC
Q 017664 65 FAVRSVIN------------HGDYL--SNVKIVVSTAVSITD------TE--VVTAGGQ--TFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 65 ~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~------~~--v~~~~g~--~~~~d~lvlAtG~~~~~p~ 120 (368)
.....+.. ..+++ .+++++...+..+++ +. +.+.++. .+.||+||+|||+.|..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~ 160 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILP 160 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCG
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCC
Confidence 00000000 01111 267888888888877 43 4445665 7999999999999977665
Q ss_pred chH---HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCc
Q 017664 121 SRT---ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKV 197 (368)
Q Consensus 121 ~~~---~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv 197 (368)
++. ..+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||
T Consensus 161 i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV 238 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTE--LGVPVTVVASQDHVLPYEDADAALVLEESFAERGV 238 (499)
T ss_dssp GGCCCSSSEEEGGGGGGCSSCCSSEEEESCSHHHHHHHHHHHH--TTCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTC
T ss_pred CCCCCcCcEEehhHhhhhhccCCeEEEECCCHHHHHHHHHHHH--cCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCC
Confidence 432 1122222222222347899999999999999999885 58899999999999999999999999999999999
Q ss_pred EEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecc
Q 017664 198 EVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGD 275 (368)
Q Consensus 198 ~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD 275 (368)
++++++.|++++.+++ .+.+.+|+++++|.||+|+|.+|+.+++....+++.++++|+|.||+++|| +.|+|||+||
T Consensus 239 ~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD 317 (499)
T 1xdi_A 239 RLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGD 317 (499)
T ss_dssp EEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSG
T ss_pred EEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECCCccc-CCCCEEEEec
Confidence 9999999999987654 566788889999999999999999988432333446777899999999998 8999999999
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc---
Q 017664 276 ITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL--- 337 (368)
Q Consensus 276 ~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~--- 337 (368)
|++.+. +++.|.+||+.+|+||. |....+. .|. ..|+++.+|+.+.++.. .+++.
T Consensus 318 ~~~~~~--l~~~A~~~g~~aa~~i~----g~~~~~~-~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~ 390 (499)
T 1xdi_A 318 CTGLLP--LASVAAMQGRIAMYHAL----GEGVSPI-RLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNA 390 (499)
T ss_dssp GGTSCS--CHHHHHHHHHHHHHHHT----TCCCCCC-CGGGCEEEECSSSEEEEEESCHHHHHHTSSCEEEEEEESTTSH
T ss_pred cCCCcc--cHHHHHHHHHHHHHHhc----CCCCccC-CCCCCcEEEEecCCceEeCCCHHHHHhCCCCEEEEEEecCccc
Confidence 998653 78899999999999997 4311111 111 24778888887765432 22221
Q ss_pred --cccCccceeeeccccchhHHHHHcCCCC
Q 017664 338 --TISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 338 --~~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
...+...+++|+ ++++++++|||+|+
T Consensus 391 ~~~~~~~~~g~~k~--~~~~~~~~ilG~~~ 418 (499)
T 1xdi_A 391 RAKMSEMRHGFVKI--FCRRSTGVVIGGVV 418 (499)
T ss_dssp HHHHTTCSSCEEEE--EEETTTCBEEEEEE
T ss_pred ceeecCCCceEEEE--EEECCCCEEEEEEE
Confidence 134566789999 99999999999986
No 37
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.6e-42 Score=332.30 Aligned_cols=344 Identities=19% Similarity=0.255 Sum_probs=244.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccce------------------e-eeec--------cc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASL------------------R-AVVE--------PS 64 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~------------------~-~~~~--------~~ 64 (368)
|++++||+||||||+|+++|..|++ |++|+|||+++.+|..+... . .... ..
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~ 81 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIK 81 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEE
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 3456899999999999999999984 99999999987665432110 0 0000 00
Q ss_pred ccccceee------------cccc--cCceeEEEeEEEEeeccE--EEecCC--eE------EEecEEEEecCCCC-CCC
Q 017664 65 FAVRSVIN------------HGDY--LSNVKIVVSTAVSITDTE--VVTAGG--QT------FVYDYVVVATGHVE-SVP 119 (368)
Q Consensus 65 ~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~~--v~~~~g--~~------~~~d~lvlAtG~~~-~~p 119 (368)
+....+.. ..++ ..+++++.......+++. +.+.+| +. ++||+||+|||+.| .+|
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~ 161 (478)
T 1v59_A 82 INVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFP 161 (478)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCC
Confidence 00000000 0001 136788877776666654 444455 46 99999999999986 345
Q ss_pred CchHH--HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCc
Q 017664 120 KSRTE--RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKV 197 (368)
Q Consensus 120 ~~~~~--~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv 197 (368)
+.+.. .+.+..........+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||
T Consensus 162 g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv 239 (478)
T 1v59_A 162 GIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSR--LGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGL 239 (478)
T ss_dssp TCCCCSSSEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCCceEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHH--cCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCC
Confidence 44321 122333322222247999999999999999999985 58899999999999998999999999999999999
Q ss_pred EEEecceeeeccc--CCC--eEEcC-----CCcEEecCEEEEccCCCCCch--hhhccccccccCCCCcEEeCCCeeecC
Q 017664 198 EVILNQSVTLNTI--SDG--LIETS-----SGETIDTDCHFMCTGKAMASS--WLRETILKDSLDGRGRLMVDENLRVRG 266 (368)
Q Consensus 198 ~i~~~~~v~~i~~--~~~--~v~~~-----~g~~i~~d~vi~a~G~~p~~~--~~~~~~l~~~~~~~g~i~vd~~~~~~~ 266 (368)
++++++.|.+++. +++ .+.+. +++++++|.||+|+|++|+.+ ++...++ .++++|+|.||+++|| +
T Consensus 240 ~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~--~~~~~G~i~vd~~~~t-~ 316 (478)
T 1v59_A 240 DFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGL--EVDKRGRLVIDDQFNS-K 316 (478)
T ss_dssp EEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTC--CBCTTSCBCCCTTSBC-S
T ss_pred EEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCc--eeCCCCCEeECcCCcc-C
Confidence 9999999999876 443 45554 456899999999999999987 5565554 6778899999999998 8
Q ss_pred CCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCc-cccccCCCeEEEeecCCccee--------EecCc
Q 017664 267 FKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTM-ATYKPGYPIALVSLGRREGVA--------HFPFL 337 (368)
Q Consensus 267 ~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~--------~~~~~ 337 (368)
.|||||+|||++.+. +++.|.+||+.||+||...-..-+.... ......|+++.+|+++.++.. .+++.
T Consensus 317 ~~~IyA~GD~~~~~~--~~~~A~~~g~~aa~~i~~~~~~~~~~~~p~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~ 394 (478)
T 1v59_A 317 FPHIKVVGDVTFGPM--LAHKAEEEGIAAVEMLKTGHGHVNYNNIPSVMYSHPEVAWVGKTEEQLKEAGIDYKIGKFPFA 394 (478)
T ss_dssp STTEEECGGGSSSCC--CHHHHHHHHHHHHHHHHHSCCCCCTTSCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGG
T ss_pred CCCEEEeeccCCCcc--cHHHHHHHHHHHHHHHcCCCCCCCCCCCCEEEEcCCcEEEEECCHHHHHHcCCCEEEEEEecc
Confidence 999999999998643 7889999999999999852100000001 111125778888887765431 12221
Q ss_pred c-----ccCccceeeeccccchhHHHHHcCCCC
Q 017664 338 T-----ISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 338 ~-----~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
. ..+...+++|+ ++++++++|||+|+
T Consensus 395 ~~~~~~~~~~~~~~~k~--~~~~~~~~ilG~~~ 425 (478)
T 1v59_A 395 ANSRAKTNQDTEGFVKI--LIDSKTERILGAHI 425 (478)
T ss_dssp GCHHHHHTTCCCCEEEE--EEETTTCBEEEEEE
T ss_pred cchhhhhcCCCcEEEEE--EEECCCCEEEEEEE
Confidence 1 23455789998 99999999999986
No 38
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=3.1e-42 Score=330.87 Aligned_cols=339 Identities=19% Similarity=0.176 Sum_probs=243.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcC--------CCceeeecccee------------------ee----e--
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDE--------KEYFEITWASLR------------------AV----V-- 61 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~--------~~~~~~~~~~~~------------------~~----~-- 61 (368)
.++||+||||||||++||.+|+ .|.+|+|||+ ...+|+.|.... .. .
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4689999999999999999997 5999999997 333443321100 00 0
Q ss_pred --cccccccceeec------------ccc--cCceeEEEeEEEEeeccEE--EecCC--eEEEecEEEEecCCCCCCCC-
Q 017664 62 --EPSFAVRSVINH------------GDY--LSNVKIVVSTAVSITDTEV--VTAGG--QTFVYDYVVVATGHVESVPK- 120 (368)
Q Consensus 62 --~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~v--~~~~g--~~~~~d~lvlAtG~~~~~p~- 120 (368)
........+..+ ... ..+++++.+.+..++++.+ .+.+| ..+.||+||||||+.|..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 000000000000 000 1367889999999988754 44455 57999999999999987776
Q ss_pred chHHHH--HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcE
Q 017664 121 SRTERL--SQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVE 198 (368)
Q Consensus 121 ~~~~~~--~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~ 198 (368)
+++... .+..........+++++|||+|++|+|+|..+.+ .+.+|+++++. .+++.+++++.+.+.+.+++.||+
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~ 241 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTG--IGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQ 241 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCE
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHH--cCCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCE
Confidence 654321 1222222223357899999999999999999986 48899999986 477888999999999999999999
Q ss_pred EEecceeeecccC-CC--eEEcCC---Cc--EEecCEEEEccCCCCCchhhhccccccccC-CCCcEEeCCCeeecCCCC
Q 017664 199 VILNQSVTLNTIS-DG--LIETSS---GE--TIDTDCHFMCTGKAMASSWLRETILKDSLD-GRGRLMVDENLRVRGFKN 269 (368)
Q Consensus 199 i~~~~~v~~i~~~-~~--~v~~~~---g~--~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~-~~g~i~vd~~~~~~~~~~ 269 (368)
+++++.+.+++.. ++ .+.+.+ |+ ++++|.||+|+|++|+.+++....+++.++ ++|+|.||+++|| +.||
T Consensus 242 ~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~ 320 (488)
T 3dgz_A 242 FLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPH 320 (488)
T ss_dssp EEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTT
T ss_pred EEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeECCCCcc-CCCC
Confidence 9999999988763 33 344433 54 579999999999999998865444555778 7899999999998 8999
Q ss_pred eEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC-------ccccccCCCeEEEeecCCcceeEe--------
Q 017664 270 VFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGT-------MATYKPGYPIALVSLGRREGVAHF-------- 334 (368)
Q Consensus 270 ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~-------- 334 (368)
|||+|||+.. .+++++.|.+||+.+|+||+ |..... ...| ..|+++.+|+++.+|....
T Consensus 321 IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~----g~~~~~~~~~~~p~~~~-~~p~~a~vGlte~~a~~~~~~~~~~~~ 394 (488)
T 3dgz_A 321 IYAIGDVAEG-RPELTPTAIKAGKLLAQRLF----GKSSTLMDYSNVPTTVF-TPLEYGCVGLSEEEAVALHGQEHVEVY 394 (488)
T ss_dssp EEECGGGBTT-CCCCHHHHHHHHHHHHHHHH----SCCCCCCCCTTCCEEEC-SSSEEEEEECCHHHHHHHHCGGGEEEE
T ss_pred EEEeEEecCC-CCcchhHHHHHHHHHHHHHc----CCCCccCCCCCCCEEEE-CCCCeEEEeCCHHHHHhhCCCCcEEEE
Confidence 9999999843 23478899999999999998 332111 1112 2578999999987765321
Q ss_pred --cCcc----cc--Cccceeeeccccch-hHHHHHcCCCC
Q 017664 335 --PFLT----IS--GRIPGWIKSRDLFV-GKTRKQLGLKP 365 (368)
Q Consensus 335 --~~~~----~~--~~~~~~~k~~~~~~-~~~~~~lG~~~ 365 (368)
.+.. .. +...+++|+ +++ +++++|||+|+
T Consensus 395 ~~~~~~~~~~~~~~~~~~g~~k~--i~~~~~~~~ilG~~~ 432 (488)
T 3dgz_A 395 HAYYKPLEFTVADRDASQCYIKM--VCMREPPQLVLGLHF 432 (488)
T ss_dssp EEECCCHHHHHTTCCCTTCEEEE--EEESSTTCBEEEEEE
T ss_pred EccccchhhhhhccCCCcEEEEE--EEecCCCCEEEEEEE
Confidence 1111 11 225789998 999 58999999986
No 39
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=7.4e-41 Score=314.09 Aligned_cols=277 Identities=21% Similarity=0.296 Sum_probs=214.3
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CC--cEEEEcCCCceeeeccceee-eecccccccceee-cccccCceeEEEeE-E
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FA--DVVLIDEKEYFEITWASLRA-VVEPSFAVRSVIN-HGDYLSNVKIVVST-A 87 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~--~v~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 87 (368)
.+++||+|||||+||+++|..|++ |. +|+|||+++.+++....+.. ........+.... +. ..+++++... +
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~v 82 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKR--APEVEWLLGVTA 82 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCCGGGSBCCCTT--SCSCEEEETCCE
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCchhhhhHHHHH--HCCCEEEcCCEE
Confidence 346899999999999999999984 66 59999999876644322211 1111111111111 11 1267787774 7
Q ss_pred EEeec--cEEEecCCeEEEecEEEEecCCCCCCCCc-hH--H------HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHH
Q 017664 88 VSITD--TEVVTAGGQTFVYDYVVVATGHVESVPKS-RT--E------RLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156 (368)
Q Consensus 88 ~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~p~~-~~--~------~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~ 156 (368)
..++. +++.+.+++.+.||+||+|||+.|..|++ ++ + ...+.....+.+..+++++|||+|++|+|+|.
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~ 162 (408)
T 2gqw_A 83 QSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAA 162 (408)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHH
Confidence 88875 47888888899999999999999776654 32 1 12222223223345899999999999999999
Q ss_pred HHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCC
Q 017664 157 EIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 157 ~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+.+ .+.+|+++++.+++++ .+++++...+.+.+++.||++++++.|.+++ ++ .+.+.+|+++++|.+|+|+|++
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 163 TART--AGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEE
T ss_pred HHHh--CCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCC
Confidence 9985 4889999999999888 4888999999999999999999999999988 33 8888899999999999999999
Q ss_pred CCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCcc--------chHHHHHHHHHHHHHHHHH
Q 017664 236 MASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEI--------KQGYLAQKHALVTAKNLKK 301 (368)
Q Consensus 236 p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~--------~~~~~a~~~g~~aa~~i~~ 301 (368)
|+.+++...++ ..+ +| +.||+++|| +.|+|||+|||+..+.+ .++..|.+||+.+|+||..
T Consensus 239 p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 239 ANDALARAAGL--ACD-DG-IFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp ECCHHHHHHTC--CBS-SS-EECCTTCBC-SSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHhCCC--CCC-CC-EEECCCCcc-CCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 99988887766 444 46 999999998 89999999999986542 2568899999999999983
No 40
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=2.8e-41 Score=323.49 Aligned_cols=337 Identities=19% Similarity=0.300 Sum_probs=242.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeecccc--cccceeeccccc---CceeEEE-eE
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSF--AVRSVINHGDYL---SNVKIVV-ST 86 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~-~~ 86 (368)
++||+|||||+||+++|.+|++ +.+|+|||+++..++....+........ ..+......+.+ .+++++. ..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 4699999999999999999974 8999999999876544332221111111 111111111111 2677765 46
Q ss_pred EEEee--ccEEEec---CCe--EEEecEEEEecCCCCCCCCchH---H------HHHHHHHHHHHHh--cCCeEEEEcCc
Q 017664 87 AVSIT--DTEVVTA---GGQ--TFVYDYVVVATGHVESVPKSRT---E------RLSQYEKDFEKVK--SANSVLIVGGG 148 (368)
Q Consensus 87 ~~~~~--~~~v~~~---~g~--~~~~d~lvlAtG~~~~~p~~~~---~------~~~~~~~~~~~~~--~~~~v~VvG~g 148 (368)
+..++ .+.+.+. +|+ .+.||+||+|||+.|..|++++ . ...+.....+.+. .+++++|||+|
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 66776 3455543 365 7999999999999976665432 1 1222333333333 68999999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecC
Q 017664 149 PTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTD 226 (368)
Q Consensus 149 ~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d 226 (368)
++|+|+|..+.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++.++. .+.++ +.++++|
T Consensus 196 ~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D 272 (480)
T 3cgb_A 196 AIGLEMAETFVE--LGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKAD 272 (480)
T ss_dssp HHHHHHHHHHHH--TTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECS
T ss_pred HHHHHHHHHHHh--cCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcC
Confidence 999999999985 488999999999998888999999999999999999999999998876543 35554 4589999
Q ss_pred EEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHH
Q 017664 227 CHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKN 298 (368)
Q Consensus 227 ~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~ 298 (368)
.||+|+|++|+.+++...++ .++++|+|.||+++|| +.|+|||+|||+..+. +.+++.|.+||+.+|+|
T Consensus 273 ~vi~a~G~~p~~~~l~~~g~--~~~~~G~I~Vd~~~~t-s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~ 349 (480)
T 3cgb_A 273 LVLVSVGVKPNTDFLEGTNI--RTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLN 349 (480)
T ss_dssp EEEECSCEEESCGGGTTSCC--CBCTTSCBCCCTTSBC-SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHH
T ss_pred EEEECcCCCcChHHHHhCCc--ccCCCCCEEECCCccC-CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHH
Confidence 99999999999888876655 6678899999999999 7999999999996532 24688999999999999
Q ss_pred HHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc----cccCccceeeeccccchhHHHH
Q 017664 299 LKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL----TISGRIPGWIKSRDLFVGKTRK 359 (368)
Q Consensus 299 i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~----~~~~~~~~~~k~~~~~~~~~~~ 359 (368)
|. |... +...+. ..++++.+|+.+.++.. .+... ...+...+++|+ ++++++++
T Consensus 350 i~----g~~~-~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kl--~~~~~~~~ 422 (480)
T 3cgb_A 350 ML----DKRR-AFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLYLKL--LYRSDTKQ 422 (480)
T ss_dssp HT----TCCC-CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEE--EEETTTCB
T ss_pred hc----CCCc-cCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEEEEE--EEECCCCE
Confidence 97 3321 111111 24567777877654421 11111 122445678998 99999999
Q ss_pred HcCCCC
Q 017664 360 QLGLKP 365 (368)
Q Consensus 360 ~lG~~~ 365 (368)
|||+|+
T Consensus 423 ilG~~~ 428 (480)
T 3cgb_A 423 LLGGQV 428 (480)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 41
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=8.6e-42 Score=317.27 Aligned_cols=270 Identities=20% Similarity=0.320 Sum_probs=213.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeeccccc-ccceeeccccc--CceeEEEe-EE
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFA-VRSVINHGDYL--SNVKIVVS-TA 87 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~-~~ 87 (368)
..++++|+|||||+||++||..|+ .+.+|+|||+++.+++....+......... .+......+++ .+++++.. ++
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 345789999999999999999996 489999999999887654444333322211 12222222222 26777654 67
Q ss_pred EEeec--cEEEecCCeEEEecEEEEecCCCCCCCCchH-------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHH
Q 017664 88 VSITD--TEVVTAGGQTFVYDYVVVATGHVESVPKSRT-------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEI 158 (368)
Q Consensus 88 ~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l 158 (368)
..+++ +++.+.+++.+.||+||+|||++|..|++++ ....+.....+.+..+++++|||+|++|+|+|..|
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l 165 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAI 165 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHH
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHH
Confidence 78875 4888999999999999999999976665432 12344444444455689999999999999999999
Q ss_pred hhhCCCCeEEEEecCcccccc-cCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCC
Q 017664 159 AVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 159 ~~~~~~~~v~~i~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
.+. +.+|+++++.+++++. +++.+.+.+.+.+++.||++++++.+.++ |+++++|.+|+++|++|+
T Consensus 166 ~~~--g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-----------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 166 IDS--GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-----------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp HHH--TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-----------HHHHHHSEEEECCCEEEC
T ss_pred HhC--CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-----------CeEEecCeEEECcCcccC
Confidence 864 7899999999998885 88999999999999999999999988765 567999999999999999
Q ss_pred chhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--cchHHHHHHHHHHHHHHHH
Q 017664 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--IKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 238 ~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--~~~~~~a~~~g~~aa~~i~ 300 (368)
.+++...++ ..+ +| +.||+++|| +.|+|||+|||+..+. ++++..|.+||+.||+||+
T Consensus 233 ~~~~~~~gl--~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 233 LDFIKDTEI--ASK-RG-ILVNDHMET-SIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNAC 292 (385)
T ss_dssp CGGGTTSCC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHT
T ss_pred hhhhhhcCC--CcC-CC-EEECCCccc-CCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhc
Confidence 999887766 343 45 999999999 8999999999997542 4578899999999999998
No 42
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5.9e-42 Score=326.28 Aligned_cols=334 Identities=19% Similarity=0.259 Sum_probs=240.9
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccce---e----------------------eee---cccc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASL---R----------------------AVV---EPSF 65 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~---~----------------------~~~---~~~~ 65 (368)
.++|++||||||||++||.+|++ |++|+|||+ +.+|+.|... . ... ...+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRL 82 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCcc
Confidence 35899999999999999999984 999999999 4454332100 0 000 0000
Q ss_pred cccceeec------------cccc--CceeEEEeEEEEeeccEEEecCCeEEEecEEEEecCCCCCCCC-chHH-HHHHH
Q 017664 66 AVRSVINH------------GDYL--SNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPK-SRTE-RLSQY 129 (368)
Q Consensus 66 ~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~-~~~~-~~~~~ 129 (368)
....+..+ .+++ .+++++.+.+..++++++.+.+ ..++||+||||||++|..|+ ++.. .+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~~~~v~~~ 161 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG-QRIQCEHLLLATGSSSVELPMLPLGGPVISS 161 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT-EEEECSEEEECCCEEECCBTTBCCBTTEECH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCccCcEecH
Confidence 00000000 0111 2678888877778888888765 78999999999999976654 3311 12222
Q ss_pred HHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecc
Q 017664 130 EKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNT 209 (368)
Q Consensus 130 ~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 209 (368)
.........+++++|||+|++|+|+|..|.+ .+.+|+++++.+++++.+++++.+.+.+.+++.||++++++.|.+++
T Consensus 162 ~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~ 239 (458)
T 1lvl_A 162 TEALAPKALPQHLVVVGGGYIGLELGIAYRK--LGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYE 239 (458)
T ss_dssp HHHTCCSSCCSEEEEECCSHHHHHHHHHHHH--HTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEE
T ss_pred HHHhhhhccCCeEEEECcCHHHHHHHHHHHH--CCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEE
Confidence 2222222247899999999999999999986 48899999999999998899999999999999999999999999988
Q ss_pred cCCC-eEEcCCC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHH
Q 017664 210 ISDG-LIETSSG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGY 286 (368)
Q Consensus 210 ~~~~-~v~~~~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~ 286 (368)
. ++ .+...+| +++++|.+|+|+|++|+.+++....+++.++++ ++.||+++|+ +.|+|||+|||+..+ ++++
T Consensus 240 ~-~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~~~--~~~~ 314 (458)
T 1lvl_A 240 N-GCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAGEP--MLAH 314 (458)
T ss_dssp T-TEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGCSS--CCHH
T ss_pred e-CCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCCCc--ccHH
Confidence 6 43 3443456 689999999999999998764223333456666 8999999997 899999999999865 3789
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----cccCcccee
Q 017664 287 LAQKHALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----TISGRIPGW 346 (368)
Q Consensus 287 ~a~~~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~~~~~~~~~ 346 (368)
.|.+||+.+|+||. |.+. + ..|. ..|+++.+|+.+.++.. .+++. ...+...++
T Consensus 315 ~A~~~g~~aa~~i~----g~~~-~-~~~~~~p~~~~~~p~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 388 (458)
T 1lvl_A 315 RAMAQGEMVAEIIA----GKAR-R-FEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGF 388 (458)
T ss_dssp HHHHHHHHHHHHHT----TCCC-C-CCCSCCCEEECSSSEEEEEECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHhc----CCCc-c-CCCCCCCEEEECCCCeEEEeCCHHHHHHcCCCEEEEEEECccchhhhhcCCCcEE
Confidence 99999999999997 3321 1 1121 14677878876654421 12211 123555789
Q ss_pred eeccccchhHHHHHcCCCC
Q 017664 347 IKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 347 ~k~~~~~~~~~~~~lG~~~ 365 (368)
+|+ ++++++++|||+|+
T Consensus 389 ~kl--~~d~~~~~ilG~~~ 405 (458)
T 1lvl_A 389 VRV--VARRDNHLILGWQA 405 (458)
T ss_dssp EEE--EEETTTCBEEEEEE
T ss_pred EEE--EEECCCCEEEEEEE
Confidence 998 99999999999986
No 43
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=5e-40 Score=310.49 Aligned_cols=314 Identities=21% Similarity=0.268 Sum_probs=224.9
Q ss_pred CcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeecccccccceeecccccC--ceeEEEeEEEEee
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLS--NVKIVVSTAVSIT 91 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 91 (368)
++|||||||+||+++|.+|++ +++|+|||+++++.+.+.......+.....+...+..+++. ++++++++++.+|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 479999999999999999973 58999999999887654322111111112233444455443 6899999999998
Q ss_pred c--cEEEecCCeEEEecEEEEecCCCC--CCCCchH--------HHHHHHHHHHHHHhcCCeEEEEcCch------hHHH
Q 017664 92 D--TEVVTAGGQTFVYDYVVVATGHVE--SVPKSRT--------ERLSQYEKDFEKVKSANSVLIVGGGP------TGVE 153 (368)
Q Consensus 92 ~--~~v~~~~g~~~~~d~lvlAtG~~~--~~p~~~~--------~~~~~~~~~~~~~~~~~~v~VvG~g~------~~~e 153 (368)
+ ++|.+.+|++++||+||||||+++ .+|+... ++.....+....+...+.++|+|++. .+.|
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~~~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e 162 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYE 162 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHH
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCccCCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHH
Confidence 5 489999999999999999999983 3555321 12222233333344456667776653 2334
Q ss_pred HHHHH----hhhC--CCCeEEEEecCccccc---ccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCC--cE
Q 017664 154 LAGEI----AVDF--PDKKVILVHRGPKLLE---FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSG--ET 222 (368)
Q Consensus 154 ~a~~l----~~~~--~~~~v~~i~~~~~~l~---~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g--~~ 222 (368)
++..+ .++. ...+|++++..+.+.+ ...+...+.+.+.++++||++++++.|++++.+...+...+| ++
T Consensus 163 ~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~ 242 (430)
T 3hyw_A 163 FALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE 242 (430)
T ss_dssp HHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceE
Confidence 44433 3221 1357888887765432 455677788899999999999999999988654324444444 58
Q ss_pred EecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC----------ccchHHHHHHHH
Q 017664 223 IDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP----------EIKQGYLAQKHA 292 (368)
Q Consensus 223 i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~----------~~~~~~~a~~~g 292 (368)
+++|.+++++|.+|+ +++...+..+..+.+|++.||++||++++|||||+|||+..| .|++++.|.+||
T Consensus 243 i~~d~vi~~~G~~~~-~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg 321 (430)
T 3hyw_A 243 VPAKFTMFMPSFQGP-EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMA 321 (430)
T ss_dssp EECSEEEEECEEECC-HHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHH
T ss_pred eecceEEEeccCCCc-hHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHH
Confidence 999999999999986 566666655455667889999999987999999999999865 357899999999
Q ss_pred HHHHHHHHHHHcCCCCCCccccccCCCeEEEeecCCcceeEe
Q 017664 293 LVTAKNLKKLMMGRNKGTMATYKPGYPIALVSLGRREGVAHF 334 (368)
Q Consensus 293 ~~aa~~i~~~l~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 334 (368)
+++|+||.+.+.|++.. .+......+++++|...++...
T Consensus 322 ~~~A~Ni~~~l~g~~~~---~~~~~~~~~~~~~G~~~~~~~~ 360 (430)
T 3hyw_A 322 MAVAHNIVNDIRNNPDK---YAPRLSAICIADFGEDAGFFFA 360 (430)
T ss_dssp HHHHHHHHHHHTTCCCC---EEECCCEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHHhcCCCCC---cccCCcEEEEEEcCCCcEEEEE
Confidence 99999999999998642 1111245788899988777643
No 44
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=6.3e-41 Score=318.53 Aligned_cols=335 Identities=20% Similarity=0.285 Sum_probs=240.2
Q ss_pred CcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeecccc--cccceeeccccc--CceeEE-EeEEE
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSF--AVRSVINHGDYL--SNVKIV-VSTAV 88 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~-~~~~~ 88 (368)
+||+|||||+||+++|..|++ |.+|+|||+++.+++....+........ ..+......+++ .+++++ ...+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 489999999999999999974 8999999999877654332221111111 011111111111 256764 44565
Q ss_pred Eee--ccEEEecC---Ce--EEEecEEEEecCCCCCCCCchH---H------HHHHHHHHHHHHh--cCCeEEEEcCchh
Q 017664 89 SIT--DTEVVTAG---GQ--TFVYDYVVVATGHVESVPKSRT---E------RLSQYEKDFEKVK--SANSVLIVGGGPT 150 (368)
Q Consensus 89 ~~~--~~~v~~~~---g~--~~~~d~lvlAtG~~~~~p~~~~---~------~~~~~~~~~~~~~--~~~~v~VvG~g~~ 150 (368)
.++ .+.+.+.+ |+ .++||+||+|||+.|..|++++ . .+.+.....+.+. .+++++|||+|++
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~ 160 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYI 160 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHH
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHH
Confidence 665 34665543 54 4899999999999976665432 1 2233333333344 6899999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCE
Q 017664 151 GVELAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDC 227 (368)
Q Consensus 151 ~~e~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~ 227 (368)
|+|+|..+.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.++. .+.+ +++++++|.
T Consensus 161 g~e~A~~l~~--~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~ 237 (447)
T 1nhp_A 161 GIEAAEAFAK--AGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADL 237 (447)
T ss_dssp HHHHHHHHHH--TTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSE
T ss_pred HHHHHHHHHH--CCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCE
Confidence 9999999885 4889999999998888 68889999999999999999999999998886643 3555 456899999
Q ss_pred EEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--------cchHHHHHHHHHHHHHHH
Q 017664 228 HFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--------IKQGYLAQKHALVTAKNL 299 (368)
Q Consensus 228 vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--------~~~~~~a~~~g~~aa~~i 299 (368)
+|+|+|.+|+.+++... + .++++|++.||+++|| +.|+|||+|||+..+. +.+++.|.+||+.+|+||
T Consensus 238 vi~a~G~~p~~~~~~~~-~--~~~~~G~i~Vd~~~~t-~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i 313 (447)
T 1nhp_A 238 VVVAVGVRPNTAWLKGT-L--ELHPNGLIKTDEYMRT-SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNL 313 (447)
T ss_dssp EEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTS
T ss_pred EEECcCCCCChHHHHhh-h--hhcCCCcEEECccccC-CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhh
Confidence 99999999998887654 4 5677899999999999 8999999999997532 247899999999999999
Q ss_pred HHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------Ee---cCccc-cCccceeeeccccchhHHHHH
Q 017664 300 KKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HF---PFLTI-SGRIPGWIKSRDLFVGKTRKQ 360 (368)
Q Consensus 300 ~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~---~~~~~-~~~~~~~~k~~~~~~~~~~~~ 360 (368)
. |.+.. ...+. ..+.++.+|+.+.++.. .+ ....+ .+...+++|+ ++++++++|
T Consensus 314 ~----g~~~~-~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~i 386 (447)
T 1nhp_A 314 E----EPVKP-FPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFKL--VYDPETTQI 386 (447)
T ss_dssp S----SCCCC-CCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEEE--EECTTTCBE
T ss_pred c----CCCCC-CCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEEE--EEECCCCEE
Confidence 7 43211 11111 23567777776655431 11 11111 2445688998 999999999
Q ss_pred cCCCC
Q 017664 361 LGLKP 365 (368)
Q Consensus 361 lG~~~ 365 (368)
||+|+
T Consensus 387 lG~~~ 391 (447)
T 1nhp_A 387 LGAQL 391 (447)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99986
No 45
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=7.4e-42 Score=325.67 Aligned_cols=337 Identities=22% Similarity=0.299 Sum_probs=245.1
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeecccee----------------------ee-e-cccccccce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLR----------------------AV-V-EPSFAVRSV 70 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~----------------------~~-~-~~~~~~~~~ 70 (368)
++||+||||||||+++|.+|++ |++|+|||+++.+|+.+.... .. . ........+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 80 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPAL 80 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHH
Confidence 3799999999999999999984 999999999977664321100 00 0 000000000
Q ss_pred ee------------ccccc--CceeEEEeEEEEeeccEEEec-CCeEEEecEEEEecCCCCCCCCch---HHHHHHHHHH
Q 017664 71 IN------------HGDYL--SNVKIVVSTAVSITDTEVVTA-GGQTFVYDYVVVATGHVESVPKSR---TERLSQYEKD 132 (368)
Q Consensus 71 ~~------------~~~~~--~~~~~~~~~~~~~~~~~v~~~-~g~~~~~d~lvlAtG~~~~~p~~~---~~~~~~~~~~ 132 (368)
.. ..+++ .+++++.+.+..++++.+... ++..+.||+||+|||+.|..|++. ...+.+....
T Consensus 81 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~ 160 (455)
T 2yqu_A 81 MAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEA 160 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHh
Confidence 00 01111 257888887777777765543 567899999999999997666532 2122223322
Q ss_pred HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCC
Q 017664 133 FEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISD 212 (368)
Q Consensus 133 ~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 212 (368)
......+++++|||+|++|+|+|..+.+ .+.+|+++++.+++++..++++.+.+.+.+++.||+++++++|++++.++
T Consensus 161 ~~~~~~~~~vvIiGgG~~g~e~A~~l~~--~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 161 LSFPEVPKRLIVVGGGVIGLELGVVWHR--LGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp TCCSSCCSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET
T ss_pred hccccCCCeEEEECCCHHHHHHHHHHHH--cCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC
Confidence 2222347899999999999999999985 48899999999999998899999999999999999999999999998765
Q ss_pred C--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHH
Q 017664 213 G--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQK 290 (368)
Q Consensus 213 ~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~ 290 (368)
+ .+.+.+|+++++|.+|+|+|.+|+.+++....+++.++++|++.||+++|+ +.|+|||+|||+..+ ++++.|.+
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~~~--~~~~~A~~ 315 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVRGP--MLAHKASE 315 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSSSC--CCHHHHHH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCCCc--cCHHHHHH
Confidence 5 566678889999999999999999877432333446677899999999998 799999999999764 37889999
Q ss_pred HHHHHHHHHHHHHcCCCCCCccccc-------cCCCeEEEeecCCccee--------EecCc-----cccCccceeeecc
Q 017664 291 HALVTAKNLKKLMMGRNKGTMATYK-------PGYPIALVSLGRREGVA--------HFPFL-----TISGRIPGWIKSR 350 (368)
Q Consensus 291 ~g~~aa~~i~~~l~g~~~~~~~~~~-------~~~~~~~~~~g~~~~~~--------~~~~~-----~~~~~~~~~~k~~ 350 (368)
||+.+|+||.. ... + ..|. ..|+++.+|+.+.++.. .+++. ...+...+++|+
T Consensus 316 ~g~~aa~~i~~----~~~-~-~~~~~~p~~~~~~~~~a~~G~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~- 388 (455)
T 2yqu_A 316 EGIAAVEHMVR----GFG-H-VDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKV- 388 (455)
T ss_dssp HHHHHHHHHHH----SCC-C-CCGGGCCEEECSSSEEEEEECCHHHHHHHTCCEEEEEEEGGGCHHHHHHTCCCCEEEE-
T ss_pred hHHHHHHHHcC----CCc-c-CCCCCCCEEEEcCCceEEEECCHHHHHHcCCCEEEEEEEcccchHHHhcCCCcEEEEE-
Confidence 99999999985 221 1 1121 14677888877655431 11111 123455788998
Q ss_pred ccchhHHHHHcCCCC
Q 017664 351 DLFVGKTRKQLGLKP 365 (368)
Q Consensus 351 ~~~~~~~~~~lG~~~ 365 (368)
++++++++|||+|+
T Consensus 389 -~~~~~~~~ilG~~~ 402 (455)
T 2yqu_A 389 -LAHAKTDRILGVHG 402 (455)
T ss_dssp -EEETTTCBEEEEEE
T ss_pred -EEECCCCEEEEEEE
Confidence 99999999999986
No 46
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=8.3e-41 Score=314.04 Aligned_cols=277 Identities=25% Similarity=0.333 Sum_probs=218.8
Q ss_pred CcEEEECCChHHHHHHHHhhc-CCc--EEEEcCCCceeeeccceee-eecccccccceeeccccc--CceeEEEe-EEEE
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS-FAD--VVLIDEKEYFEITWASLRA-VVEPSFAVRSVINHGDYL--SNVKIVVS-TAVS 89 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~-g~~--v~lie~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~ 89 (368)
++|+|||||+||++||..|++ |++ |+|||+++.+++....+.. ..........+....+++ .+++++.. ++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 589999999999999999984 766 9999999987765433322 111111111111222222 26788877 7888
Q ss_pred eecc--EEEecCCeEEEecEEEEecCCCCCCCCchH---H------HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHH
Q 017664 90 ITDT--EVVTAGGQTFVYDYVVVATGHVESVPKSRT---E------RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEI 158 (368)
Q Consensus 90 ~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~---~------~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l 158 (368)
++.. .+.+.+++.+.||+||+|||+.|..|++++ . ...+.....+.+..+++++|||+|++|+|+|..+
T Consensus 83 id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l 162 (410)
T 3ef6_A 83 LDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTA 162 (410)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHH
T ss_pred EECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHH
Confidence 8854 888889999999999999999976654332 1 2344444444455689999999999999999999
Q ss_pred hhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 159 AVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 159 ~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.++. .+++.+|+++++|.||+|+|.+
T Consensus 163 ~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 163 RK--LGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HH--TTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred Hh--CCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 85 5889999999998876 47889999999999999999999999999887654 6889999999999999999999
Q ss_pred CCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCcc-------chHHHHHHHHHHHHHHHH
Q 017664 236 MASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEI-------KQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 236 p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~-------~~~~~a~~~g~~aa~~i~ 300 (368)
|+.+++...++ ..+ +| +.||+++|| +.|+|||+|||+..+.+ +++..|..||+.||+||.
T Consensus 241 p~~~l~~~~gl--~~~-~g-i~vd~~~~t-~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 241 PADQLARQAGL--ACD-RG-VIVDHCGAT-LAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp ECCHHHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHT
T ss_pred ecHHHHHhCCC--ccC-Ce-EEEccCeeE-CCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHc
Confidence 99999887776 444 44 999999998 89999999999976542 347899999999999998
No 47
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.8e-40 Score=308.13 Aligned_cols=334 Identities=18% Similarity=0.207 Sum_probs=233.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-C--CcEEEEcCCCceeeeccceeeeecccc-cccceee-ccccc--CceeEEE-
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-F--ADVVLIDEKEYFEITWASLRAVVEPSF-AVRSVIN-HGDYL--SNVKIVV- 84 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g--~~v~lie~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~--~~~~~~~- 84 (368)
|+.++||+|||||+||+++|.+|++ | .+|+|+|+++...+....+........ ..+.... ...++ .+++++.
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 80 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTH 80 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECS
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeC
Confidence 3456899999999999999999984 5 679999998743322222211111111 1111111 11111 2567764
Q ss_pred eEEEEeec--cEEEecCCeEEEecEEEEecCCCCCCCCchH---------HHHHHHHHHHHHHhcCCeEEEEcCchhHHH
Q 017664 85 STAVSITD--TEVVTAGGQTFVYDYVVVATGHVESVPKSRT---------ERLSQYEKDFEKVKSANSVLIVGGGPTGVE 153 (368)
Q Consensus 85 ~~~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e 153 (368)
..+..++. +++.+. +..+.||+||+|||+.|..|+++. ..+.++......+..+++++|+|+|++|+|
T Consensus 81 ~~v~~i~~~~~~v~~~-~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e 159 (384)
T 2v3a_A 81 TRVTGIDPGHQRIWIG-EEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCE 159 (384)
T ss_dssp CCCCEEEGGGTEEEET-TEEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHH
T ss_pred CEEEEEECCCCEEEEC-CcEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHH
Confidence 35666664 577765 457999999999999977665432 223444444445556899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccc-cCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEE
Q 017664 154 LAGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFM 230 (368)
Q Consensus 154 ~a~~l~~~~~~~~v~~i~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~ 230 (368)
+|..+.+ .+.+|+++++.+++++. .++.+.+.+.+.+++.||++++++.|.+++.+++ .+.+.+|+++++|.+|+
T Consensus 160 ~A~~l~~--~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~ 237 (384)
T 2v3a_A 160 FANDLSS--GGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVS 237 (384)
T ss_dssp HHHHHHH--TTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEE
T ss_pred HHHHHHh--CCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEE
Confidence 9999985 48899999999988875 4788899999999999999999999999876554 67788999999999999
Q ss_pred ccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc--cchHHHHHHHHHHHHHHHHHHHcCCCC
Q 017664 231 CTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE--IKQGYLAQKHALVTAKNLKKLMMGRNK 308 (368)
Q Consensus 231 a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~--~~~~~~a~~~g~~aa~~i~~~l~g~~~ 308 (368)
|+|.+|+.+++...++ ..+ +| +.||+++|| +.|||||+|||+..+. ......|.+||+.+|+||. |++.
T Consensus 238 a~G~~p~~~l~~~~g~--~~~-~g-i~vd~~~~t-~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~----g~~~ 308 (384)
T 2v3a_A 238 AVGLRPRTELAFAAGL--AVN-RG-IVVDRSLRT-SHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLA----GNPS 308 (384)
T ss_dssp CSCEEECCHHHHHTTC--CBS-SS-EEECTTCBC-SSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHT----TCCC
T ss_pred CcCCCcCHHHHHHCCC--CCC-CC-EEECCCCCC-CCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhc----CCCc
Confidence 9999999888776665 455 57 999999998 8999999999985322 2346778999999999997 4321
Q ss_pred C----Cc--cccccCCCeEEEeecCCcceeEecCccccCccceeeeccccchhHHHHHcCCCC
Q 017664 309 G----TM--ATYKPGYPIALVSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLGLKP 365 (368)
Q Consensus 309 ~----~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~lG~~~ 365 (368)
. .. ..|++...+..+++...+. ..+...+...++.|+ +++ ++++|||+++
T Consensus 309 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~g~~~~--~~~-~~~~i~G~~~ 364 (384)
T 2v3a_A 309 QVAYGPMPVTVKTPACPLVVSPPPRGMD----GQWLVEGSGTDLKVL--CRD-TAGRVIGYAL 364 (384)
T ss_dssp CCCCCCCCEEECCTTSCEEEECCCTTCC----CEEEEEEETTEEEEE--EEC-TTSCEEEEEE
T ss_pred cCCCCCcceEEEECCeeEEEecCCCCCC----ceEEEEecCCcEEEE--EEc-cCCEEEEEEE
Confidence 1 00 1123333444444332210 111123344577776 666 6799999986
No 48
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=6.3e-39 Score=301.95 Aligned_cols=280 Identities=20% Similarity=0.238 Sum_probs=220.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCc--EEEEcCCCceeeecccee-eeecccc-cccceeeccccc--CceeEEEe-
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FAD--VVLIDEKEYFEITWASLR-AVVEPSF-AVRSVINHGDYL--SNVKIVVS- 85 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~--v~lie~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~- 85 (368)
++++||+|||||+||+++|..|++ |++ |+|||+++.+++....+. ....... .........+++ .++++...
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 86 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGA 86 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCC
Confidence 456899999999999999999984 766 999999998766543332 1111111 111111112221 26778776
Q ss_pred EEEEeecc--EEEecCCeEEEecEEEEecCCCCCCCCchH---------HHHHHHHHHHHHHhc-CCeEEEEcCchhHHH
Q 017664 86 TAVSITDT--EVVTAGGQTFVYDYVVVATGHVESVPKSRT---------ERLSQYEKDFEKVKS-ANSVLIVGGGPTGVE 153 (368)
Q Consensus 86 ~~~~~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~-~~~v~VvG~g~~~~e 153 (368)
++..+++. .+.+.++..+.||+||+|||+.|..|+++. ....+.......+.. +++++|||+|++|+|
T Consensus 87 ~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e 166 (415)
T 3lxd_A 87 EVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLE 166 (415)
T ss_dssp CEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHH
T ss_pred EEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHH
Confidence 78888754 788888999999999999999976654331 133444444445555 899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEE
Q 017664 154 LAGEIAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHF 229 (368)
Q Consensus 154 ~a~~l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi 229 (368)
+|..+.+ .+.+|+++++.+++++ ..++.+.+.+.+.++++||++++++.|++++.+++ .+++.+|+++++|.||
T Consensus 167 ~A~~l~~--~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv 244 (415)
T 3lxd_A 167 AAAVLTK--FGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVI 244 (415)
T ss_dssp HHHHHHH--TTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEE
T ss_pred HHHHHHh--cCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEE
Confidence 9999985 5889999999999887 47889999999999999999999999999987654 6888999999999999
Q ss_pred EccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccc---------hHHHHHHHHHHHHHHHH
Q 017664 230 MCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIK---------QGYLAQKHALVTAKNLK 300 (368)
Q Consensus 230 ~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~---------~~~~a~~~g~~aa~~i~ 300 (368)
+|+|.+|+.+++...++ ..+ +| +.||+++|| +.|+|||+|||+..+.+. ++..|..||+.||+||+
T Consensus 245 ~a~G~~p~~~l~~~~gl--~~~-~g-i~vd~~~~t-~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 245 VGIGIVPCVGALISAGA--SGG-NG-VDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp ECSCCEESCHHHHHTTC--CCS-SS-EECCTTCBC-SSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred ECCCCccChHHHHhCCC--CcC-CC-EEECCCCCc-CCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 99999999999887766 344 45 999999999 899999999999876533 35899999999999998
No 49
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=1e-39 Score=309.28 Aligned_cols=336 Identities=21% Similarity=0.254 Sum_probs=233.9
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc----CCcEEEEcCCCceeeeccceeeeecccccccceeeccccc--CceeEEEeEE
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS----FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYL--SNVKIVVSTA 87 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~----g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 87 (368)
+.++||||||||+||+++|..|++ +++|+|||+++.+.+...............+......+++ .+++++.+.+
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v 81 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSA 81 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCE
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEE
Confidence 346799999999999999999864 8999999999987654321111111111112222223222 3788888889
Q ss_pred EEeecc--EEEecCCeEEEecEEEEecCCCCC---CCCchH--------HHHHHH---HHHHHHHhcCCeEEEEcCchhH
Q 017664 88 VSITDT--EVVTAGGQTFVYDYVVVATGHVES---VPKSRT--------ERLSQY---EKDFEKVKSANSVLIVGGGPTG 151 (368)
Q Consensus 88 ~~~~~~--~v~~~~g~~~~~d~lvlAtG~~~~---~p~~~~--------~~~~~~---~~~~~~~~~~~~v~VvG~g~~~ 151 (368)
..+++. .+.+.+++.+.||+||+|||+.|. +|+... ..+.+. ....+.....++++|||+|+++
T Consensus 82 ~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~ 161 (437)
T 3sx6_A 82 EQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGA 161 (437)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTC
T ss_pred EEEEcCCCEEEECCCCEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 888864 788888988999999999999854 444321 112222 2222233336678899997654
Q ss_pred ------HHHHHHHhhh--CCCC----e-EEEEecCccccc----ccCchhHHHHHHHHHcCCcEEEecceeeecccCCCe
Q 017664 152 ------VELAGEIAVD--FPDK----K-VILVHRGPKLLE----FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGL 214 (368)
Q Consensus 152 ------~e~a~~l~~~--~~~~----~-v~~i~~~~~~l~----~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~ 214 (368)
+|+|..+... ..+. + |+++++.+.+.+ .. ++....+.+.++++||++++++.|++++.+...
T Consensus 162 g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~-~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~ 240 (437)
T 3sx6_A 162 SCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGV-GDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMY 240 (437)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCC-TTHHHHHHHHHHHTTCEEECSEEEEEEETTEEE
T ss_pred CcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcc-hHHHHHHHHHHHHCCCEEEcCCEEEEEECCeEE
Confidence 8888554421 1233 3 999999887632 22 357788899999999999999999988754222
Q ss_pred EE--cCC-----CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC-------
Q 017664 215 IE--TSS-----GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP------- 280 (368)
Q Consensus 215 v~--~~~-----g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~------- 280 (368)
+. ..+ ++++++|.+++++|+.++..+....++ .+++|++.||+++|++++|||||+|||+..+
T Consensus 241 ~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl---~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~ 317 (437)
T 3sx6_A 241 VTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL---CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPV 317 (437)
T ss_dssp EEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT---BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSS
T ss_pred EEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc---cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcC
Confidence 22 223 568999999999999877555443444 5788999999999998899999999999865
Q ss_pred ---ccchHHHHHHHHHHHHHHHHHHHcCCCCCCccccccC-CCeEEEeecCCcceeEe-c----C---ccccCccceeee
Q 017664 281 ---EIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPG-YPIALVSLGRREGVAHF-P----F---LTISGRIPGWIK 348 (368)
Q Consensus 281 ---~~~~~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~----~---~~~~~~~~~~~k 348 (368)
.+++++.|.+||+.+|+||.+.|.|++.. +|.|. ...+++.+|...++... + . +...|.+.+++|
T Consensus 318 ~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~---~~~~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K 394 (437)
T 3sx6_A 318 PTGAPKTGYMIESMVSAAVHNIKADLEGRKGE---QTMGTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAK 394 (437)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCC---CCCCSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCC---CcccCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHH
Confidence 36789999999999999999999998543 44443 35677888887655321 1 1 234566666777
Q ss_pred ccccchhHHH
Q 017664 349 SRDLFVGKTR 358 (368)
Q Consensus 349 ~~~~~~~~~~ 358 (368)
. .+++.+.
T Consensus 395 ~--~~~~~f~ 402 (437)
T 3sx6_A 395 V--AFEKYFI 402 (437)
T ss_dssp H--HHHHHHH
T ss_pred H--HHHHHHH
Confidence 5 5555443
No 50
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=2.4e-39 Score=303.68 Aligned_cols=278 Identities=19% Similarity=0.252 Sum_probs=218.6
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CC--cEEEEcCCCceeeecccee-eeecccc-cccceeeccccc--CceeEEEeEEE
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FA--DVVLIDEKEYFEITWASLR-AVVEPSF-AVRSVINHGDYL--SNVKIVVSTAV 88 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~--~v~lie~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~ 88 (368)
++||+|||||+||+++|..|++ |+ +|+|||+++..++....+. ....... .........+++ .++++...++.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~ 80 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMV 80 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEE
Confidence 3689999999999999999984 76 8999999997665433222 1111111 111111112221 26777767788
Q ss_pred Eeecc--EEEecCCeEEEecEEEEecCCCCCCCCchH---------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHH
Q 017664 89 SITDT--EVVTAGGQTFVYDYVVVATGHVESVPKSRT---------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGE 157 (368)
Q Consensus 89 ~~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~---------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~ 157 (368)
.++.. .+.+.++..+.||+|++|||+.|..|+++. ..+.+..........+++++|+|+|++|+|+|..
T Consensus 81 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~ 160 (404)
T 3fg2_P 81 SIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAAT 160 (404)
T ss_dssp EEETTTTEEEESSSCEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHH
T ss_pred EEECCCCEEEECCCCEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHH
Confidence 88754 788889999999999999999866554332 1344555555556678999999999999999999
Q ss_pred HhhhCCCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccC
Q 017664 158 IAVDFPDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTG 233 (368)
Q Consensus 158 l~~~~~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G 233 (368)
+.+ .+.+|+++++.+++++ .+++++.+.+.+.+++.||++++++.|.+++.+++ .+.+.+|+++++|.||+|+|
T Consensus 161 l~~--~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G 238 (404)
T 3fg2_P 161 ARA--KGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVG 238 (404)
T ss_dssp HHH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCC
T ss_pred HHh--CCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcC
Confidence 985 4889999999998887 47888999999999999999999999999887654 58899999999999999999
Q ss_pred CCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccc--------hHHHHHHHHHHHHHHHH
Q 017664 234 KAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIK--------QGYLAQKHALVTAKNLK 300 (368)
Q Consensus 234 ~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~--------~~~~a~~~g~~aa~~i~ 300 (368)
++|+.+++...++ ..+ +| +.||+++|| +.|||||+|||+..+.+. +...|..||+.||+||.
T Consensus 239 ~~p~~~l~~~~gl--~~~-~G-i~vd~~~~t-~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 239 VIPNVEIAAAAGL--PTA-AG-IIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp EEECCHHHHHTTC--CBS-SS-EEECTTSBC-SSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHhCCC--CCC-CC-EEECCCccc-CCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 9999999887776 444 45 999999998 899999999999875432 36899999999999997
No 51
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=8.4e-40 Score=308.93 Aligned_cols=280 Identities=18% Similarity=0.238 Sum_probs=212.6
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CC--cEEEEcCCCceeeeccceee-eecccc-cccceeeccccc--CceeEEEe-
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FA--DVVLIDEKEYFEITWASLRA-VVEPSF-AVRSVINHGDYL--SNVKIVVS- 85 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~--~v~lie~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~--~~~~~~~~- 85 (368)
++++||+|||||+||+++|..|++ |. +|+|||+++.+.+....+.. ...... .........+++ .+++++..
T Consensus 2 ~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 81 (431)
T 1q1r_A 2 NANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGT 81 (431)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSC
T ss_pred CCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCC
Confidence 346899999999999999999984 76 79999999876543221111 111000 011111111111 26777654
Q ss_pred EEEEeec--cEEEecCCeEEEecEEEEecCCCCCCCCchHH---H---H------HHHHHHHHHHhcCCeEEEEcCchhH
Q 017664 86 TAVSITD--TEVVTAGGQTFVYDYVVVATGHVESVPKSRTE---R---L------SQYEKDFEKVKSANSVLIVGGGPTG 151 (368)
Q Consensus 86 ~~~~~~~--~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~---~---~------~~~~~~~~~~~~~~~v~VvG~g~~~ 151 (368)
.+..++. +.+.+.+++.+.||+||+|||+.|..|++++. . + .++....+.+..+++++|||+|++|
T Consensus 82 ~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g 161 (431)
T 1q1r_A 82 QVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIG 161 (431)
T ss_dssp CEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHH
T ss_pred EEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHH
Confidence 4677764 47888888889999999999999877765432 2 1 1222222233458999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCcccccc-cCchhHHHHHHHHHcCCcEEEecceeeeccc--CCC---eEEcCCCcEEec
Q 017664 152 VELAGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVTLNTI--SDG---LIETSSGETIDT 225 (368)
Q Consensus 152 ~e~a~~l~~~~~~~~v~~i~~~~~~l~~-~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~---~v~~~~g~~i~~ 225 (368)
+|+|..+.+ .+.+|+++++.+++++. +++++.+.+.+.+++.||++++++.|.+++. +++ .+.+.+|+++++
T Consensus 162 ~E~A~~l~~--~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 162 LEVAATAIK--ANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp HHHHHHHHH--TTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred HHHHHHHHh--CCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 999999985 48899999999988874 7888999999999999999999999999876 433 578889999999
Q ss_pred CEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccc--------hHHHHHHHHHHHHH
Q 017664 226 DCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIK--------QGYLAQKHALVTAK 297 (368)
Q Consensus 226 d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~--------~~~~a~~~g~~aa~ 297 (368)
|.||+|+|++|+.+++...++ ..+ +| +.||+++|| +.|+|||+|||+..+.+. .+..|.+||+.+|+
T Consensus 240 D~Vv~a~G~~p~~~l~~~~gl--~~~-~g-i~Vd~~~~t-s~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 314 (431)
T 1q1r_A 240 DLVIAGIGLIPNCELASAAGL--QVD-NG-IVINEHMQT-SDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAA 314 (431)
T ss_dssp SEEEECCCEEECCHHHHHTTC--CBS-SS-EECCTTSBC-SSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEECCCCCcCcchhhccCC--CCC-CC-EEECCCccc-CCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHH
Confidence 999999999999998887766 444 45 999999998 899999999999875432 46789999999999
Q ss_pred HHH
Q 017664 298 NLK 300 (368)
Q Consensus 298 ~i~ 300 (368)
||.
T Consensus 315 ~i~ 317 (431)
T 1q1r_A 315 ILC 317 (431)
T ss_dssp HHT
T ss_pred Hhc
Confidence 997
No 52
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=4.5e-39 Score=304.29 Aligned_cols=332 Identities=21% Similarity=0.304 Sum_probs=234.5
Q ss_pred CCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeecccccccceeeccccc--CceeEEEeEEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYL--SNVKIVVSTAVSI 90 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 90 (368)
++||+|||||+||+++|.+|++ +++|+|||+++.+++...............+......+++ .+++++..++..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 3699999999999999999974 7999999999988765422111111111122223333333 2788888888888
Q ss_pred ecc--EEEecCCeEEEecEEEEecCCCCCCCCchHH----------HHHHHHHHHHHHhcCCeEEEEcCchhH------H
Q 017664 91 TDT--EVVTAGGQTFVYDYVVVATGHVESVPKSRTE----------RLSQYEKDFEKVKSANSVLIVGGGPTG------V 152 (368)
Q Consensus 91 ~~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~----------~~~~~~~~~~~~~~~~~v~VvG~g~~~------~ 152 (368)
++. .+.+.++..+.||+||+|||+.|..|+.... +........+.+...++++|||+|+++ +
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~ 161 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAY 161 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHH
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHH
Confidence 864 7888888889999999999999888865321 122222222233345678899998764 8
Q ss_pred HHHHHHhhhC--CC----CeEEEEecCcccccc---cCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCC----
Q 017664 153 ELAGEIAVDF--PD----KKVILVHRGPKLLEF---VGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSS---- 219 (368)
Q Consensus 153 e~a~~l~~~~--~~----~~v~~i~~~~~~l~~---~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~---- 219 (368)
|+|..+.... .+ .+|+++++.+.+... ..+.....+.+.++++||++++++.|++++.+ .+.+.+
T Consensus 162 E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~--~v~~~~~~~~ 239 (430)
T 3h28_A 162 EFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPD--KVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSS--EEEEECTTSC
T ss_pred HHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCC--eEEEEecCCC
Confidence 8885554211 12 589999988766321 12357888899999999999999999988654 344444
Q ss_pred CcEEecCEEEEccCCCCCchhhhccccccccCCCC-cEEeCCCeeecCCCCeEEecccCCCC----------ccchHHHH
Q 017664 220 GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRG-RLMVDENLRVRGFKNVFAIGDITDIP----------EIKQGYLA 288 (368)
Q Consensus 220 g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g-~i~vd~~~~~~~~~~ifa~GD~~~~~----------~~~~~~~a 288 (368)
++++++|.+++++|+.|+. ++...+.++ .+++| ++.||+++|++++|||||+|||+..+ .+++++.|
T Consensus 240 g~~i~~D~vv~a~G~~~~~-~l~~~~~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A 317 (430)
T 3h28_A 240 THEVPAKFTMFMPSFQGPE-VVASAGDKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMI 317 (430)
T ss_dssp EEEEECSEEEEECEEECCH-HHHTTCTTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHH
T ss_pred ceEEeeeEEEECCCCccch-hHhhccccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHH
Confidence 6789999999999999764 444421222 57789 99999999998899999999999865 36789999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccccccC-CCeEEEeecCCcceeEe-c-------CccccCccceeeeccccchhHH
Q 017664 289 QKHALVTAKNLKKLMMGRNKGTMATYKPG-YPIALVSLGRREGVAHF-P-------FLTISGRIPGWIKSRDLFVGKT 357 (368)
Q Consensus 289 ~~~g~~aa~~i~~~l~g~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~-------~~~~~~~~~~~~k~~~~~~~~~ 357 (368)
.+||+.+|+||.+.|.|++.. +.|. ...+++.+|...++... + .+...|.+.+++|. .+++..
T Consensus 318 ~~~g~~aa~ni~~~l~g~~~~----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~--~~~~~~ 389 (430)
T 3h28_A 318 EQMAMAVAHNIVNDIRNNPDK----YAPRLSAICIADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKT--AFEKYF 389 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC----EEECCCEEEEEECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCC----CcCCcceEEEEEeCCCceEEEeCCCCCCccceeecccHHHHHHHH--HHHHHH
Confidence 999999999999999998642 3333 35788889987665321 1 12345666666775 555544
No 53
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=8.4e-40 Score=321.52 Aligned_cols=344 Identities=17% Similarity=0.184 Sum_probs=237.6
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCC-C-------ceeeeccc---eee---------------------e
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEK-E-------YFEITWAS---LRA---------------------V 60 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~-~-------~~~~~~~~---~~~---------------------~ 60 (368)
..++||+||||||||++||.+|+ .|++|+|||+. + .+|+.+.. ... .
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 45689999999999999999997 59999999973 2 12321100 000 0
Q ss_pred ecc---cccccceeec------------cc-c-cCceeEEEeEEEEeeccEEEe--cCC--eEEEecEEEEecCCCCCCC
Q 017664 61 VEP---SFAVRSVINH------------GD-Y-LSNVKIVVSTAVSITDTEVVT--AGG--QTFVYDYVVVATGHVESVP 119 (368)
Q Consensus 61 ~~~---~~~~~~~~~~------------~~-~-~~~~~~~~~~~~~~~~~~v~~--~~g--~~~~~d~lvlAtG~~~~~p 119 (368)
... ......+..+ .. + ..+++++.+.+..++.+.+.. .+| ..+.||+||||||+.|..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p 264 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYP 264 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCC
Confidence 000 0000000000 00 0 126788888888888775543 455 5799999999999998877
Q ss_pred CchHHHH--HHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCc
Q 017664 120 KSRTERL--SQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKV 197 (368)
Q Consensus 120 ~~~~~~~--~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv 197 (368)
++++... .+..........+++++|||+|++|+|+|..+.+ .+.+|+++++. .+++.+++++.+.+.+.+++.||
T Consensus 265 ~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~--~g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv 341 (598)
T 2x8g_A 265 EIPGAVEYGITSDDLFSLPYFPGKTLVIGASYVALECAGFLAS--LGGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGV 341 (598)
T ss_dssp SSTTHHHHCEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTC
T ss_pred CCCCcccceEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCC
Confidence 7654321 1122222222347899999999999999999985 47899999998 67788889999999999999999
Q ss_pred EEEecceeeeccc------CC---Ce--E--EcCCCcEEe--cCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCe
Q 017664 198 EVILNQSVTLNTI------SD---GL--I--ETSSGETID--TDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL 262 (368)
Q Consensus 198 ~i~~~~~v~~i~~------~~---~~--v--~~~~g~~i~--~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~ 262 (368)
++++++.+.++.. ++ +. + .+.+|++++ +|.||+|+|++|+.+++....+++.++++|+|.||+++
T Consensus 342 ~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~ 421 (598)
T 2x8g_A 342 KFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCTDDE 421 (598)
T ss_dssp EEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCCTTS
T ss_pred EEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeCCCC
Confidence 9999987776632 11 32 2 245776655 99999999999999876433444577888999999999
Q ss_pred eecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCC-C--CCccccccCCCeEEEeecCCcceeEe-----
Q 017664 263 RVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRN-K--GTMATYKPGYPIALVSLGRREGVAHF----- 334 (368)
Q Consensus 263 ~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~-~--~~~~~~~~~~~~~~~~~g~~~~~~~~----- 334 (368)
|| +.|+|||+|||+.. .+++++.|.+||+.||+||........ . .+...| ..++++.+|+++.+|....
T Consensus 422 ~t-s~~~VyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~p~~~~-~~~~~a~vGl~e~~a~~~~~~~~~ 498 (598)
T 2x8g_A 422 QT-TVSNVYAIGDINAG-KPQLTPVAIQAGRYLARRLFAGATELTDYSNVATTVF-TPLEYGACGLSEEDAIEKYGDKDI 498 (598)
T ss_dssp BC-SSTTEEECGGGBTT-SCCCHHHHHHHHHHHHHHHHHCCCCCCCCTTCCEEEC-SSSCEEEEECCHHHHHHHHCGGGE
T ss_pred cC-CCCCEEEEeeecCC-CCccHHHHHHhHHHHHHHHhcCCCcccCCCCCcEEEE-CCCceEEEeCCHHHHHhhCCCCcE
Confidence 98 89999999999643 234788999999999999985211100 0 011122 2578888999887664321
Q ss_pred -----cCcc----cc--Cccceeeeccccchh-HHHHHcCCCC
Q 017664 335 -----PFLT----IS--GRIPGWIKSRDLFVG-KTRKQLGLKP 365 (368)
Q Consensus 335 -----~~~~----~~--~~~~~~~k~~~~~~~-~~~~~lG~~~ 365 (368)
++.. .. +...+++|+ ++++ ++++|||+|+
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~kl--i~~~~~~~~ilG~~~ 539 (598)
T 2x8g_A 499 EVYHSNFKPLEWTVAHREDNVCYMKL--VCRKSDNMRVLGLHV 539 (598)
T ss_dssp EEEEEEECCTHHHHTTCCSSCEEEEE--EEETTTTTEEEEEEE
T ss_pred EEEEEeccchhHHhhcCCCCcEEEEE--EEecCCCCEEEEEEE
Confidence 1111 11 224688998 8985 6999999986
No 54
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=7.6e-39 Score=300.24 Aligned_cols=289 Identities=22% Similarity=0.255 Sum_probs=211.3
Q ss_pred CCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeeecccccccceeeccccc-CceeEEEeEEEEee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYL-SNVKIVVSTAVSIT 91 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 91 (368)
.++|||||||+||+++|.+|++ +.+|+|||+++.+.+.+.................+...+. .++++++++++.+|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~~v~~id 81 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHDSALGID 81 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECSCEEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEeEEEEEE
Confidence 3689999999999999999973 5799999999976544322111111111111222222222 37899999999998
Q ss_pred cc--EEEecCCeEEEecEEEEecCCCCC---CCCchH-------------HHHHHHHHHHHHHhcCCeEEEEcCc-----
Q 017664 92 DT--EVVTAGGQTFVYDYVVVATGHVES---VPKSRT-------------ERLSQYEKDFEKVKSANSVLIVGGG----- 148 (368)
Q Consensus 92 ~~--~v~~~~g~~~~~d~lvlAtG~~~~---~p~~~~-------------~~~~~~~~~~~~~~~~~~v~VvG~g----- 148 (368)
+. .+.+.++.++.||+||+|||+.+. +|+... +......+..+.......+++.+++
T Consensus 82 ~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~ 161 (401)
T 3vrd_B 82 PDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRC 161 (401)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBC
T ss_pred ccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEe
Confidence 64 788999999999999999999854 444221 1222222333333334444443321
Q ss_pred -h----hHHHHHHHHhhhCCCCeEEEEecCcccc--cccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC
Q 017664 149 -P----TGVELAGEIAVDFPDKKVILVHRGPKLL--EFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS 219 (368)
Q Consensus 149 -~----~~~e~a~~l~~~~~~~~v~~i~~~~~~l--~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~ 219 (368)
. .+.+++..+.+...+.+|+++++.+.+. +.+++.+.+.+.+.+++.||++++++.+..++.+.. .+.+.+
T Consensus 162 ~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~ 241 (401)
T 3vrd_B 162 PPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSF 241 (401)
T ss_dssp TTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETT
T ss_pred ehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCC
Confidence 1 3456666666666778999999887753 345666666677778899999999999988876544 789999
Q ss_pred CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCC-eeecCCCCeEEecccCCC-CccchHHHHHHHHHHHHH
Q 017664 220 GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN-LRVRGFKNVFAIGDITDI-PEIKQGYLAQKHALVTAK 297 (368)
Q Consensus 220 g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~-~~~~~~~~ifa~GD~~~~-~~~~~~~~a~~~g~~aa~ 297 (368)
|+++++|++++++|.+|+ +++...++ .+++|+|.||++ ||++++|||||+|||+.. |.+++++.|.+||+++|+
T Consensus 242 g~~i~~D~vi~~~g~~~~-~~~~~~gl---~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ 317 (401)
T 3vrd_B 242 GETFKAAVINLIPPQRAG-KIAQSASL---TNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAA 317 (401)
T ss_dssp SCEEECSEEEECCCEEEC-HHHHHTTC---CCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHH
T ss_pred CcEEEeeEEEEecCcCCc-hhHhhccc---cccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHH
Confidence 999999999999999986 57777765 578899999986 888899999999999864 567899999999999999
Q ss_pred HHHHHHcCCCC
Q 017664 298 NLKKLMMGRNK 308 (368)
Q Consensus 298 ~i~~~l~g~~~ 308 (368)
||.+.|.|+++
T Consensus 318 ni~~~l~G~~~ 328 (401)
T 3vrd_B 318 AVVALLKGEEP 328 (401)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHhcCCCC
Confidence 99999999864
No 55
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.6e-38 Score=285.74 Aligned_cols=277 Identities=13% Similarity=0.131 Sum_probs=206.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeeccc-ccc----cceeecccccCceeEEEeEEEE
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPS-FAV----RSVINHGDYLSNVKIVVSTAVS 89 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~ 89 (368)
++||+|||||++|+++|..|+ +|++|+|+|+++..+..+.......... ... ..+......+.++.++..++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~ 81 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTD 81 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEE
Confidence 479999999999999999997 5999999999865442221111111110 000 1111111122367788888888
Q ss_pred eecc----EEEecCCeEEEecEEEEecCCCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHh
Q 017664 90 ITDT----EVVTAGGQTFVYDYVVVATGHVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIA 159 (368)
Q Consensus 90 ~~~~----~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~ 159 (368)
++.. .+.+.++..+.||+||+|||+.|..|.++. ..+............+++++|+|+|++|+|+|..|.
T Consensus 82 i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 82 AKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp EEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGG
T ss_pred EEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhh
Confidence 8754 678888888999999999999966554332 111122222223345899999999999999999998
Q ss_pred hhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCch
Q 017664 160 VDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 160 ~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 239 (368)
+. + +|+++.+.+. .+...+.+.+++.||+++. +.+.+++.++ .+.+.+|+++++|.+|+++|++|+.+
T Consensus 162 ~~--g-~v~~v~~~~~-------~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~-~v~~~~g~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 162 DW--G-ETTFFTNGIV-------EPDADQHALLAARGVRVET-TRIREIAGHA-DVVLADGRSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp GT--S-EEEEECTTTC-------CCCHHHHHHHHHTTCEEEC-SCEEEEETTE-EEEETTSCEEEESEEEECCEEECCCS
T ss_pred hc--C-cEEEEECCCC-------CCCHHHHHHHHHCCcEEEc-ceeeeeecCC-eEEeCCCCEEEEEEEEEccCcccCch
Confidence 63 5 9999988765 3345677889999999996 8888887554 88899999999999999999999988
Q ss_pred hhhccccccccCCCC-cEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCC
Q 017664 240 WLRETILKDSLDGRG-RLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRN 307 (368)
Q Consensus 240 ~~~~~~l~~~~~~~g-~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~ 307 (368)
++...++....+++| ++.||+++++ +.|||||+|||++. ++++..|..||+.||.+|.+.|.+.+
T Consensus 230 ~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 230 WIEKLGCAVEEGPMGSTIVTDPMKQT-TARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp CHHHHTCCEEEETTEEEECCCTTCBC-SSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hHHhcCCccccCCCCceEEeCCCCcc-CCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 887776643222467 8999999998 89999999999986 44889999999999999999987763
No 56
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=3.4e-37 Score=295.74 Aligned_cols=288 Identities=20% Similarity=0.284 Sum_probs=213.3
Q ss_pred CCcCCCCCCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCceeeeccceeeee----ccc-----------------
Q 017664 9 TAAGLVEKKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFEITWASLRAVV----EPS----------------- 64 (368)
Q Consensus 9 ~~~~~~~~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~~~~~~~~~~~----~~~----------------- 64 (368)
+.+.++.++||||||||+||++||..|++ +.+|+|||+++.+++....+...+ ...
T Consensus 4 ~~~~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~ 83 (493)
T 1m6i_A 4 PQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSI 83 (493)
T ss_dssp ----CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEES
T ss_pred CCCCCCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccc
Confidence 44566778999999999999999998873 899999999987664322111100 000
Q ss_pred -ccc-cceeecccc----cCceeEEEe-EEEEee--ccEEEecCCeEEEecEEEEecCCCCCCCCchH----H-------
Q 017664 65 -FAV-RSVINHGDY----LSNVKIVVS-TAVSIT--DTEVVTAGGQTFVYDYVVVATGHVESVPKSRT----E------- 124 (368)
Q Consensus 65 -~~~-~~~~~~~~~----~~~~~~~~~-~~~~~~--~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~----~------- 124 (368)
+.. ..+....++ ..+++++.. .+..++ .++|.+.+|..+.||+||||||++|..|+... .
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~ 163 (493)
T 1m6i_A 84 YFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTL 163 (493)
T ss_dssp BSSCGGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEE
T ss_pred cccchHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCCcccccccccCceEE
Confidence 000 000000111 126777775 677777 45888889989999999999999987765422 1
Q ss_pred --HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhC--CCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEE
Q 017664 125 --RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDF--PDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEV 199 (368)
Q Consensus 125 --~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~--~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i 199 (368)
.+.++.........+++++|||+|++|+|+|..|.+.. .+.+|+++++.+.+++ .+++.+...+.+.++++||++
T Consensus 164 ~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v 243 (493)
T 1m6i_A 164 FRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKV 243 (493)
T ss_dssp CCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEE
T ss_pred EcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEE
Confidence 12233333344556899999999999999999987532 3678999998876554 456788889999999999999
Q ss_pred EecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCC-CCcEEeCCCeeecCCCCeEEeccc
Q 017664 200 ILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDG-RGRLMVDENLRVRGFKNVFAIGDI 276 (368)
Q Consensus 200 ~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~-~g~i~vd~~~~~~~~~~ifa~GD~ 276 (368)
++++.|++++.+++ .+.+.+|+++++|.||+|+|.+|+.+++...++ .+++ +|++.||+++|+ .|||||+|||
T Consensus 244 ~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl--~~~~~~ggi~Vd~~l~t--~~~IyA~GD~ 319 (493)
T 1m6i_A 244 MPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL--EIDSDFGGFRVNAELQA--RSNIWVAGDA 319 (493)
T ss_dssp ECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC--CBCTTTCSEECCTTCEE--ETTEEECGGG
T ss_pred EeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC--ccccCCCcEEECCCccc--CCCeeEeeee
Confidence 99999998876544 578889999999999999999999988877666 4564 588999999998 5999999999
Q ss_pred CCCCcc-------chHHHHHHHHHHHHHHHH
Q 017664 277 TDIPEI-------KQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 277 ~~~~~~-------~~~~~a~~~g~~aa~~i~ 300 (368)
+..+.+ ..+..|..||+.||+||.
T Consensus 320 a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 320 ACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp EEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred EeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 975422 235689999999999997
No 57
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.8e-38 Score=286.49 Aligned_cols=275 Identities=17% Similarity=0.223 Sum_probs=190.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecc---ceeeee------cccccccceeecccccCceeEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWA---SLRAVV------EPSFAVRSVINHGDYLSNVKIVVS 85 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 85 (368)
.|||+||||||||++||.+|+ .|++|+|||++.. ++... ...... ..++.........++ ...+...
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 82 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKF--GAVYQYG 82 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHT--TCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCeeecccccCCcCCccccchHHHHHHHHHHHhhc--cccccce
Confidence 699999999999999999997 4999999998753 22111 110000 000000000000111 2222222
Q ss_pred E-EEEe--eccEEEecCCeEEEecEEEEecCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHH
Q 017664 86 T-AVSI--TDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156 (368)
Q Consensus 86 ~-~~~~--~~~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~ 156 (368)
. .... ........++++++||++|||||++|..|++++. .+..+.........+++++|||+|++|+|+|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~ 162 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGT 162 (312)
T ss_dssp CCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHH
T ss_pred eeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHH
Confidence 1 1112 2235566678899999999999998766554421 11222222233456899999999999999999
Q ss_pred HHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC------eEE--cCCCcEEecCEE
Q 017664 157 EIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG------LIE--TSSGETIDTDCH 228 (368)
Q Consensus 157 ~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~------~v~--~~~g~~i~~d~v 228 (368)
.|.+ .+.+|+++++.+++++. .....+.+++.++.......+..+...+. ... ..++..+++|.+
T Consensus 163 ~l~~--~g~~Vtlv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 235 (312)
T 4gcm_A 163 FLTK--FADKVTIVHRRDELRAQ-----RILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGV 235 (312)
T ss_dssp HHTT--TCSEEEEECSSSSCCSC-----HHHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHh--cCCEEEEEecccccCcc-----hhHHHHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeE
Confidence 9984 68999999999887543 22334567788888888777665544333 112 233458999999
Q ss_pred EEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 229 FMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 229 i~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
++++|..|+..++...++ .+++|+|.||+++|| +.|||||+|||++.+ +++++.|..||+.||+||.++|..
T Consensus 236 ~~~~g~~~~~~~~~~~g~---~~~~G~I~vd~~~~T-s~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 236 FIYIGMKPLTAPFKDLGI---TNDVGYIVTKDDMTT-SVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp EECSCEEESCGGGGGGTC---BCTTSCBCCCTTSBC-SSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCCCcCchhHHhcce---ecCCCeEeeCCCCcc-CCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988877664 457899999999999 899999999999753 457899999999999999998753
No 58
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2.9e-38 Score=285.27 Aligned_cols=279 Identities=18% Similarity=0.193 Sum_probs=196.9
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecc-cccccce----eecccccCceeEEEe
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEP-SFAVRSV----INHGDYLSNVKIVVS 85 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~ 85 (368)
..|+++||+|||||||||+||.+|+ .|++|+|||++...+........+... ......+ ......+..+.+...
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEK 81 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEEC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEee
Confidence 4577899999999999999999987 599999999986433211111111100 0000000 011111234566666
Q ss_pred EEEEeec-----cEEEecCCeEEEecEEEEecCCCCCCCCchHHHH------HHHHHHHHHHhcCCeEEEEcCchh-HHH
Q 017664 86 TAVSITD-----TEVVTAGGQTFVYDYVVVATGHVESVPKSRTERL------SQYEKDFEKVKSANSVLIVGGGPT-GVE 153 (368)
Q Consensus 86 ~~~~~~~-----~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~~~------~~~~~~~~~~~~~~~v~VvG~g~~-~~e 153 (368)
.+..++. .++.+.+++.++||+||||||++|..|++++... ..+........++++++|||+|.. +.|
T Consensus 82 ~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e 161 (304)
T 4fk1_A 82 TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLH 161 (304)
T ss_dssp CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHH
T ss_pred EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhh
Confidence 6655542 2678889999999999999999987777654321 222222333445778888888865 567
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEE
Q 017664 154 LAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFM 230 (368)
Q Consensus 154 ~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~ 230 (368)
+|..+. ..+.+|+++.+.+.+ ...+.+.++++|++++++. +..+..+++ .+++.+|+++++|.+++
T Consensus 162 ~a~~~~--~~~~~v~i~~~~~~~--------~~~~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi 230 (304)
T 4fk1_A 162 MTKLVY--NWSTDLVIATNGNEL--------SQTIMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFI 230 (304)
T ss_dssp HHHHHT--TTCSCEEEECSSCCC--------CHHHHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEE
T ss_pred HHHHHH--hCCceEEEEeccccc--------hhhhhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceee
Confidence 777665 358899998876543 3456778899999999765 566655544 68899999999999999
Q ss_pred ccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 231 CTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 231 a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
++|.+|+.+++...++ +++++|+|.||+++|| +.|||||+|||++.+ ++++..|..||+.||.+|.++|..
T Consensus 231 ~~g~~~~~~~~~~~g~--~~~~~G~I~vd~~~~T-s~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 231 VPTFFRPNQFIEQLGC--ELQSNGTFVIDDFGRT-SEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CCEEECSSCHHHHTTC--CCCTTSSSCSSTTCBC-SSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCChhhhhcCe--EECCCCCEEECcCCcc-CCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhh
Confidence 8887777777776665 6789999999999999 899999999999753 346889999999999999998864
No 59
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=9.3e-38 Score=283.98 Aligned_cols=282 Identities=19% Similarity=0.181 Sum_probs=206.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeee-cccccc---cce-eeccccc--CceeEEEe
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVV-EPSFAV---RSV-INHGDYL--SNVKIVVS 85 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~-~~~~~~---~~~-~~~~~~~--~~~~~~~~ 85 (368)
.+++||+|||||+||+++|..|+ +|++|+|||++ .+..+....... .+.+.. ..+ ....++. .++++...
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD 90 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES
T ss_pred CCccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 34689999999999999999998 59999999998 433332111100 011100 001 0111111 15666667
Q ss_pred EEEEeecc----EEEecCCeEEEecEEEEecCCCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhHHHHH
Q 017664 86 TAVSITDT----EVVTAGGQTFVYDYVVVATGHVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELA 155 (368)
Q Consensus 86 ~~~~~~~~----~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a 155 (368)
.+..++.. .+.+.++..+.||+||+|||+.|..|+++. ..+............+++++|+|+|++++|+|
T Consensus 91 ~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a 170 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGA 170 (323)
T ss_dssp CEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHH
T ss_pred EEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHH
Confidence 77777644 577777789999999999999966655432 22212222222445689999999999999999
Q ss_pred HHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC---Cc--EEecCEE
Q 017664 156 GEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS---GE--TIDTDCH 228 (368)
Q Consensus 156 ~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~---g~--~i~~d~v 228 (368)
..+.+. +.+|+++++.+++++ ++ ..+.+.+++.||++++++.+.+++.++. .+.+.+ |+ ++++|.+
T Consensus 171 ~~l~~~--g~~v~~~~~~~~~~~--~~---~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~v 243 (323)
T 3f8d_A 171 EILSSY--STKVYLIHRRDTFKA--QP---IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGV 243 (323)
T ss_dssp HHHHHH--SSEEEEECSSSSCCS--CH---HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEE
T ss_pred HHHHHh--CCeEEEEEeCCCCCc--CH---HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEE
Confidence 999864 789999999988764 22 2233344556999999999999887654 466554 65 7999999
Q ss_pred EEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC-ccchHHHHHHHHHHHHHHHHHHHcCCC
Q 017664 229 FMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-EIKQGYLAQKHALVTAKNLKKLMMGRN 307 (368)
Q Consensus 229 i~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~-~~~~~~~a~~~g~~aa~~i~~~l~g~~ 307 (368)
|+++|+.|+.+++...++ .++++|++.||+++|+ +.|||||+|||++.+ .++++..|..||+.||.||.+.+.+++
T Consensus 244 v~a~G~~p~~~~~~~~g~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 244 FIEIGFDPPTDFAKSNGI--ETDTNGYIKVDEWMRT-SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp EECCCEECCHHHHHHTTC--CBCTTSSBCCCTTCBC-SSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEECCCCChhHHhhcCe--eecCCCcEecCCCcee-cCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 999999999888877765 6688999999999998 899999999999863 356899999999999999999998764
No 60
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=7.8e-38 Score=285.16 Aligned_cols=281 Identities=19% Similarity=0.211 Sum_probs=202.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeee-ccccc----cccee-eccccc--CceeEE
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVV-EPSFA----VRSVI-NHGDYL--SNVKIV 83 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~-~~~~~----~~~~~-~~~~~~--~~~~~~ 83 (368)
|++++||+||||||||+++|..|+ .|++|+|||++ .++..+....... .+.+. ...+. ...++. .+++++
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 83 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVE 83 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 445689999999999999999997 49999999998 3443322111000 00110 00000 011111 256776
Q ss_pred EeEEEEeecc-------EEEecCCeEEEecEEEEecCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEcCchh
Q 017664 84 VSTAVSITDT-------EVVTAGGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEKVKSANSVLIVGGGPT 150 (368)
Q Consensus 84 ~~~~~~~~~~-------~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~VvG~g~~ 150 (368)
...+..++.. .+.+.++..+.||+||+|||+.|..|+++.. .++.+.........+++++|+|+|++
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~ 163 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDA 163 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHH
T ss_pred eeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHH
Confidence 6777766532 5667788889999999999998666554321 11112222223456799999999999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHH-HcCCcEEEecceeeecccCCC--eEEcC---CCc--E
Q 017664 151 GVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWL-TSKKVEVILNQSVTLNTISDG--LIETS---SGE--T 222 (368)
Q Consensus 151 ~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l-~~~gv~i~~~~~v~~i~~~~~--~v~~~---~g~--~ 222 (368)
|+|+|..|.+ .+.+|+++++.+.+.. + ..+.+.+ ++.||++++++.++++..++. .+.+. +|+ +
T Consensus 164 g~e~A~~l~~--~g~~Vtlv~~~~~~~~--~----~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~ 235 (325)
T 2q7v_A 164 AVEEGMFLTK--FADEVTVIHRRDTLRA--N----KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSE 235 (325)
T ss_dssp HHHHHHHHTT--TCSEEEEECSSSSCCS--C----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHHh--cCCEEEEEeCCCcCCc--c----hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEE
Confidence 9999999985 4889999999876532 2 2333444 457999999999999887543 45553 665 7
Q ss_pred EecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHH
Q 017664 223 IDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKL 302 (368)
Q Consensus 223 i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~ 302 (368)
+++|.+|+|+|++|+.+++... + .++++|++.||+++|+ +.|||||+|||+..+ ++++..|.+||+.||.||.+.
T Consensus 236 i~~D~vi~a~G~~p~~~~l~~~-~--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 236 LATDGVFIFIGHVPNTAFVKDT-V--SLRDDGYVDVRDEIYT-NIPMLFAAGDVSDYI-YRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp EECSEEEECSCEEESCGGGTTT-S--CBCTTSCBCCBTTTBC-SSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEEccCCCCChHHHhhh-c--ccCCCccEecCCCCcc-CCCCEEEeecccCcc-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888765 3 6678899999999998 899999999999863 457899999999999999999
Q ss_pred HcCCC
Q 017664 303 MMGRN 307 (368)
Q Consensus 303 l~g~~ 307 (368)
|.+++
T Consensus 311 l~~~~ 315 (325)
T 2q7v_A 311 LAALE 315 (325)
T ss_dssp HHHC-
T ss_pred HHHhh
Confidence 98764
No 61
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.4e-37 Score=282.08 Aligned_cols=279 Identities=20% Similarity=0.239 Sum_probs=194.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecc-cee--eeec--ccccc----cce-eecccc--cCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWA-SLR--AVVE--PSFAV----RSV-INHGDY--LSN 79 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~-~~~--~~~~--~~~~~----~~~-~~~~~~--~~~ 79 (368)
|++.+||+||||||||++||.+|+ +|++|+|||++...+..+. .+. ..+. +.++. ..+ ....+. ..+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~ 80 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYG 80 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcC
Confidence 566799999999999999999997 5999999999864332111 110 0000 01100 000 000111 013
Q ss_pred eeEEEeEEEEeec----cEEEecCCeEEEecEEEEecCCCCCCCCchHHHHH------HHHH--HHHHHhcCCeEEEEcC
Q 017664 80 VKIVVSTAVSITD----TEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLS------QYEK--DFEKVKSANSVLIVGG 147 (368)
Q Consensus 80 ~~~~~~~~~~~~~----~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~~~~------~~~~--~~~~~~~~~~v~VvG~ 147 (368)
..+....+..... ..+.+.++..+.||+||||||+.|..|++++.... .+.. .......+++++|||+
T Consensus 81 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGg 160 (314)
T 4a5l_A 81 TTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGG 160 (314)
T ss_dssp CEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECS
T ss_pred cEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECC
Confidence 4444444443332 25667788899999999999999776665543221 1111 1122345799999999
Q ss_pred chhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEE-----cCC
Q 017664 148 GPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIE-----TSS 219 (368)
Q Consensus 148 g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~-----~~~ 219 (368)
|++|+|+|..+.+ .+.+|+++++.+.... ......+.....+++.+....+.++...+. .+. +.+
T Consensus 161 G~ig~e~A~~l~~--~G~~Vt~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 233 (314)
T 4a5l_A 161 GDAAMEEALHLTK--YGSKVIILHRRDAFRA-----SKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGE 233 (314)
T ss_dssp SHHHHHHHHHHTT--TSSEEEEECSSSSCCS-----CHHHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCC
T ss_pred ChHHHHHHHHHHH--hCCeeeeecccccccc-----cchhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccccc
Confidence 9999999999984 6899999998766432 223445566778899988888877765443 222 344
Q ss_pred CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHH
Q 017664 220 GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNL 299 (368)
Q Consensus 220 g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i 299 (368)
++++++|.+++++|++|+.+++... ...+++|++ ||+++|| +.|||||+|||++.+ .+++..|+.||+.||.++
T Consensus 234 ~~~i~~d~vi~a~G~~pn~~~l~~~---~~~~~~G~i-v~~~~~T-s~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~~ 307 (314)
T 4a5l_A 234 YKVVPVAGLFYAIGHSPNSKFLGGQ---VKTADDGYI-LTEGPKT-SVDGVFACGDVCDRV-YRQAIVAAGSGCMAALSC 307 (314)
T ss_dssp EEEEECSEEEECSCEEESCGGGTTS---SCBCTTSCB-CCBTTBC-SSTTEEECSTTTCSS-CCCHHHHHHHHHHHHHHH
T ss_pred ceeeccccceEecccccChhHhccc---ceEcCCeeE-eCCCCcc-CCCCEEEEEeccCCc-chHHHHHHHHHHHHHHHH
Confidence 5789999999999999999988643 357788877 8999998 899999999999865 347888999999999999
Q ss_pred HHHHc
Q 017664 300 KKLMM 304 (368)
Q Consensus 300 ~~~l~ 304 (368)
.++|+
T Consensus 308 ~~yL~ 312 (314)
T 4a5l_A 308 EKWLQ 312 (314)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99885
No 62
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.1e-38 Score=285.61 Aligned_cols=288 Identities=22% Similarity=0.212 Sum_probs=201.0
Q ss_pred eeccCCcCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeee-cccc---ccccee-eccccc-
Q 017664 5 LWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVV-EPSF---AVRSVI-NHGDYL- 77 (368)
Q Consensus 5 ~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~-~~~~---~~~~~~-~~~~~~- 77 (368)
+.......|+.++||+||||||+|+++|..|+ +|++|+|+|+.. ++..+....... .+.+ ....+. ...++.
T Consensus 5 l~~~~~~~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (319)
T 3cty_A 5 LHAVSSEEKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAA 83 (319)
T ss_dssp ---------CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHH
Confidence 33344455666789999999999999999998 499999999954 332221110000 0000 000000 001111
Q ss_pred -CceeEEEeEEEEeec--c--EEEecCCeEEEecEEEEecCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEc
Q 017664 78 -SNVKIVVSTAVSITD--T--EVVTAGGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEKVKSANSVLIVG 146 (368)
Q Consensus 78 -~~~~~~~~~~~~~~~--~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~VvG 146 (368)
.+++++..++..++. + .+.+ ++..+.||+||+|+|+.|..|+++.. .+............+++++|+|
T Consensus 84 ~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG 162 (319)
T 3cty_A 84 NYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIG 162 (319)
T ss_dssp TTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEEC
T ss_pred HcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEEC
Confidence 156665556666653 3 4555 56689999999999998766654321 1111122222345689999999
Q ss_pred CchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcC---CC
Q 017664 147 GGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETS---SG 220 (368)
Q Consensus 147 ~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~---~g 220 (368)
+|++|+|+|..|.+ .+.+|+++++.+.+.. + ..+.+.+++.||++++++++.++..+++ .+.+. +|
T Consensus 163 ~G~~g~e~a~~l~~--~g~~V~~i~~~~~~~~--~----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g 234 (319)
T 3cty_A 163 GGNSGAIAAISMSE--YVKNVTIIEYMPKYMC--E----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTG 234 (319)
T ss_dssp CSHHHHHHHHHHTT--TBSEEEEECSSSSCCS--C----HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTC
T ss_pred CCHHHHHHHHHHHh--hCCcEEEEEcCCccCC--C----HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCC
Confidence 99999999999985 4789999998876532 2 3456667789999999999999887654 45543 56
Q ss_pred c--EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHH
Q 017664 221 E--TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKN 298 (368)
Q Consensus 221 ~--~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~ 298 (368)
+ ++++|.||+|+|+.|+.+++...++ .++++|++.||+++|+ +.|||||+|||+..+ ++++..|.+||+.||.|
T Consensus 235 ~~~~i~~D~vi~a~G~~p~~~~l~~~gl--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~ 310 (319)
T 3cty_A 235 EEKLIETDGVFIYVGLIPQTSFLKDSGV--KLDERGYIVVDSRQRT-SVPGVYAAGDVTSGN-FAQIASAVGDGCKAALS 310 (319)
T ss_dssp CEEEECCSEEEECCCEEECCGGGTTSCC--CBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHH
T ss_pred ceEEEecCEEEEeeCCccChHHHhhccc--cccCCccEeCCCCCcc-CCCCEEEeecccCcc-hhhHHHHHHHHHHHHHH
Confidence 4 6999999999999999998876655 6688899999999997 899999999999863 35789999999999999
Q ss_pred HHHHHcCC
Q 017664 299 LKKLMMGR 306 (368)
Q Consensus 299 i~~~l~g~ 306 (368)
|.+.|.++
T Consensus 311 i~~~l~~~ 318 (319)
T 3cty_A 311 LYSDSISK 318 (319)
T ss_dssp HHHHHTC-
T ss_pred HHHHhhcc
Confidence 99999775
No 63
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=2.4e-36 Score=283.95 Aligned_cols=294 Identities=20% Similarity=0.224 Sum_probs=216.5
Q ss_pred CcEEEECCChHHHHHHHHhhc----CCcEEEEcCCCceeeeccceeeeecccccccceeeccccc--CceeEEEeEEEEe
Q 017664 17 KKVVVIGGGVGGSLLAYHIQS----FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYL--SNVKIVVSTAVSI 90 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~----g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 90 (368)
+||+|||||++|+++|..|++ |++|+|||+++.+.+...............+......+++ .+++++..++..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 589999999999999999864 8999999999987655432221111111122222223222 2688888888888
Q ss_pred ecc--EEEecCCe----EEEecEEEEecCCCCCCCCchHHH--------HHHHHHHHHHHhc-CCeEEEEcCch------
Q 017664 91 TDT--EVVTAGGQ----TFVYDYVVVATGHVESVPKSRTER--------LSQYEKDFEKVKS-ANSVLIVGGGP------ 149 (368)
Q Consensus 91 ~~~--~v~~~~g~----~~~~d~lvlAtG~~~~~p~~~~~~--------~~~~~~~~~~~~~-~~~v~VvG~g~------ 149 (368)
+.. .+.+.++. ++.||+||+|||+.|..|.+++.. ..+.....+.+.. .++++|||+|.
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~ 161 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHN 161 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCS
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCC
Confidence 864 77776665 399999999999997655433211 1112222222222 26778999991
Q ss_pred -------------------hHHHHHHHHhhh--CCC----CeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecce
Q 017664 150 -------------------TGVELAGEIAVD--FPD----KKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQS 204 (368)
Q Consensus 150 -------------------~~~e~a~~l~~~--~~~----~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~ 204 (368)
.++|+|..+... ..+ .+|+++++.+ .++.+++.+.+.+.+.+++.||++++++.
T Consensus 162 ~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~ 240 (409)
T 3h8l_A 162 PKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFK 240 (409)
T ss_dssp SCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCC
T ss_pred ccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCc
Confidence 467877654421 123 4899999988 77778889999999999999999999999
Q ss_pred eeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccch
Q 017664 205 VTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQ 284 (368)
Q Consensus 205 v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~ 284 (368)
|++++.+ .+.+.+|+++++|.+|+++|+.|+ +++...+.++ .+++|++.||+++|++++||||++|||+..+.+++
T Consensus 241 v~~i~~~--~v~~~~g~~~~~D~vi~a~G~~~~-~~l~~~~~~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~ 316 (409)
T 3h8l_A 241 IKEIREH--EIVDEKGNTIPADITILLPPYTGN-PALKNSTPDL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKL 316 (409)
T ss_dssp EEEECSS--EEEETTSCEEECSEEEEECCEECC-HHHHTSCGGG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCC
T ss_pred eEEECCC--eEEECCCCEEeeeEEEECCCCCcc-HHHHhccccC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcH
Confidence 9988654 688899999999999999999987 5666663332 46789999999999988999999999998777789
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccccccC
Q 017664 285 GYLAQKHALVTAKNLKKLMMGRNKGTMATYKPG 317 (368)
Q Consensus 285 ~~~a~~~g~~aa~~i~~~l~g~~~~~~~~~~~~ 317 (368)
+..|..||+.||+||.+.+.+.. +...|.|.
T Consensus 317 ~~~A~~q~~~aa~~i~~~l~~~~--~~~~~~~~ 347 (409)
T 3h8l_A 317 GYLAVMTGRIAAQHLANRLGVPT--KVDKYYPT 347 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCC--CCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC--CccccCCE
Confidence 99999999999999999984432 22455553
No 64
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.9e-37 Score=279.80 Aligned_cols=282 Identities=18% Similarity=0.200 Sum_probs=206.0
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeee-eccccc----ccce-eeccccc--CceeEEE
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAV-VEPSFA----VRSV-INHGDYL--SNVKIVV 84 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~-~~~~~~----~~~~-~~~~~~~--~~~~~~~ 84 (368)
++++||+||||||||+++|..|++ |++|+|+|+.. .+..+...... ..+.+. ...+ ....++. .+++++.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF 81 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 356899999999999999999985 99999999753 33222111000 000110 0000 0001111 2567776
Q ss_pred eEEEEeecc----EEEecCCeEEEecEEEEecCCCCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCchhHHHH
Q 017664 85 STAVSITDT----EVVTAGGQTFVYDYVVVATGHVESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGGPTGVEL 154 (368)
Q Consensus 85 ~~~~~~~~~----~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g~~~~e~ 154 (368)
..+..++.. .+ +.++..+.||+||+|||+.|..|+++... +..+.........+++++|||+|++|+|+
T Consensus 82 ~~v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~ 160 (320)
T 1trb_A 82 DHINKVDLQNRPFRL-NGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEE 160 (320)
T ss_dssp CCEEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHH
T ss_pred eeeeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHH
Confidence 667777642 34 56778899999999999998877765432 11112222234568999999999999999
Q ss_pred HHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCC----C--cEEec
Q 017664 155 AGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSS----G--ETIDT 225 (368)
Q Consensus 155 a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~----g--~~i~~ 225 (368)
|..|.+ .+.+|+++++.+.+. .++.+.+.+.+.+++.||++++++.+.+++.+++ .+.+.+ | +++++
T Consensus 161 A~~l~~--~g~~Vtlv~~~~~~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~ 236 (320)
T 1trb_A 161 ALYLSN--IASEVHLIHRRDGFR--AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDV 236 (320)
T ss_dssp HHHHTT--TSSEEEEECSSSSCC--CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEEC
T ss_pred HHHHHh--cCCeEEEEEeCCccc--cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEc
Confidence 999985 588999999987753 3556777888899999999999999999987653 355543 4 58999
Q ss_pred CEEEEccCCCCCchhhhccccccccCCCCcEEeCCCe-----eecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHH
Q 017664 226 DCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL-----RVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 226 d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~-----~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~ 300 (368)
|.+|+|+|++|+.+++. .++ .++ +|++.||+++ ++ +.|||||+|||+..+ ++++..|..+|+.||.+|.
T Consensus 237 D~vv~a~G~~p~~~~~~-~~l--~~~-~G~i~vd~~~~~~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 237 AGLFVAIGHSPNTAIFE-GQL--ELE-NGYIKVQSGIHGNATQT-SIPGVFAAGDVMDHI-YRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp SEEEECSCEEESCGGGT-TTS--CEE-TTEECCCCSSSSCTTBC-SSTTEEECGGGGCSS-SCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCCCChHHhc-ccc--ccc-CceEEECCCcccccccC-CCCCEEEcccccCCc-chhhhhhhccHHHHHHHHH
Confidence 99999999999988876 334 566 8999999997 55 899999999999864 4578999999999999999
Q ss_pred HHHcCCC
Q 017664 301 KLMMGRN 307 (368)
Q Consensus 301 ~~l~g~~ 307 (368)
+.|.+++
T Consensus 311 ~~l~~~~ 317 (320)
T 1trb_A 311 RYLDGLA 317 (320)
T ss_dssp HHHTC--
T ss_pred HHHHhcc
Confidence 9998764
No 65
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=7.6e-37 Score=277.05 Aligned_cols=282 Identities=18% Similarity=0.175 Sum_probs=202.5
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEE-EcCCCceeeeccceeeee-ccccc-----ccceeeccccc--CceeEE
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVL-IDEKEYFEITWASLRAVV-EPSFA-----VRSVINHGDYL--SNVKIV 83 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~l-ie~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~--~~~~~~ 83 (368)
++++||+|||||+|||++|..|+ +|++|+| +|+ +.+++.+....... .+.+. .+......++. .++++.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 80 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHE 80 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEE
Confidence 35689999999999999999998 4999999 999 44444332211100 01110 01111111111 156666
Q ss_pred EeEEEEe-ec--c--EE-EecCCeEEEecEEEEecCCCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhH
Q 017664 84 VSTAVSI-TD--T--EV-VTAGGQTFVYDYVVVATGHVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTG 151 (368)
Q Consensus 84 ~~~~~~~-~~--~--~v-~~~~g~~~~~d~lvlAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~VvG~g~~~ 151 (368)
...+..+ +. + .+ ...++ .+.||+||+|||+.|..|+++. ..+............+++++|+|+|+++
T Consensus 81 ~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~ 159 (315)
T 3r9u_A 81 MVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTA 159 (315)
T ss_dssp CCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHH
T ss_pred EEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHH
Confidence 6666666 33 2 32 22344 8999999999999866655432 2222233333344568999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEc--CCCc--EEe
Q 017664 152 VELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIET--SSGE--TID 224 (368)
Q Consensus 152 ~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~--~~g~--~i~ 224 (368)
+|+|..+.+ .+.+|+++++.+.+. .+ ...+.+.+++.||++++++.+.++..+++ .+.+ .+|+ +++
T Consensus 160 ~e~a~~l~~--~g~~v~~~~~~~~~~--~~---~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~ 232 (315)
T 3r9u_A 160 LEEALYLAN--ICSKIYLIHRRDEFR--AA---PSTVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLN 232 (315)
T ss_dssp HHHHHHHHT--TSSEEEEECSSSSCB--SC---HHHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEEC
T ss_pred HHHHHHHHh--hCCEEEEEEeCCCCC--CC---HHHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEee
Confidence 999999985 488999999988762 22 23445566789999999999999987663 3444 3775 899
Q ss_pred cCEEEEccCCCCCchhhhc-cccc-cccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHH
Q 017664 225 TDCHFMCTGKAMASSWLRE-TILK-DSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKL 302 (368)
Q Consensus 225 ~d~vi~a~G~~p~~~~~~~-~~l~-~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~ 302 (368)
+|.+|+++|++|+.+++.. ..++ +.++++|++.||+++|| +.|||||+|||++.+ ++++..|+.||+.||.||.+.
T Consensus 233 ~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t-~~~~v~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 310 (315)
T 3r9u_A 233 VPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQT-SVAGLFAAGDLRKDA-PKQVICAAGDGAVAALSAMAY 310 (315)
T ss_dssp CSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECGGGBTTC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCccc-CCCCEEEeecccCCc-hhhhhhHHhhHHHHHHHHHHH
Confidence 9999999999999988876 2233 46788899999999999 899999999998643 568899999999999999998
Q ss_pred HcCC
Q 017664 303 MMGR 306 (368)
Q Consensus 303 l~g~ 306 (368)
|.++
T Consensus 311 l~~~ 314 (315)
T 3r9u_A 311 IESL 314 (315)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 8764
No 66
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1e-36 Score=275.97 Aligned_cols=279 Identities=20% Similarity=0.216 Sum_probs=200.4
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCceeeeccceeeee-cccc----ccccee-eccccc--CceeEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEYFEITWASLRAVV-EPSF----AVRSVI-NHGDYL--SNVKIVVS 85 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~~~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~--~~~~~~~~ 85 (368)
++||+||||||+|+++|..|+ +|+ +|+|+|++. ++..+....... .+.+ ....+. ...++. .+++++..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 79 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMT 79 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECS
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 369999999999999999997 499 999999964 332221100000 0000 000000 001111 15666666
Q ss_pred EEEEeec--c--EEEecCCeEEEecEEEEecCCCCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCchhHHHHH
Q 017664 86 TAVSITD--T--EVVTAGGQTFVYDYVVVATGHVESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGGPTGVELA 155 (368)
Q Consensus 86 ~~~~~~~--~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a 155 (368)
++..++. + .+.+.++..++||+||+|||+.|..|+++... +..+.........+++++|+|+|++|+|+|
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A 159 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEA 159 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHH
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHH
Confidence 6666653 3 56677888899999999999987777654321 111222223345679999999999999999
Q ss_pred HHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHH-cCCcEEEecceeeecccCCC---eEEcC---CCc--EEecC
Q 017664 156 GEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLT-SKKVEVILNQSVTLNTISDG---LIETS---SGE--TIDTD 226 (368)
Q Consensus 156 ~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~-~~gv~i~~~~~v~~i~~~~~---~v~~~---~g~--~i~~d 226 (368)
..|.+ .+.+|+++++.+.+. .+ ..+.+.+. +.||++++++.+.++..+++ .+.+. +|+ ++++|
T Consensus 160 ~~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D 231 (311)
T 2q0l_A 160 IYLAN--ICKKVYLIHRRDGFR--CA----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVP 231 (311)
T ss_dssp HHHHT--TSSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECS
T ss_pred HHHHh--cCCEEEEEeeCCccC--CC----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecC
Confidence 99985 488999999987752 22 23445554 57999999999998876633 35554 665 79999
Q ss_pred EEEEccCCCCCchhhhccc--cccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHc
Q 017664 227 CHFMCTGKAMASSWLRETI--LKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 227 ~vi~a~G~~p~~~~~~~~~--l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
.+|+++|++|+.+++...+ .++.++++|++.||+++|+ +.|||||+|||+..+ ++++..|.+||+.||.||.+.|.
T Consensus 232 ~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 232 GFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKT-NVQGLFAAGDIRIFA-PKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp EEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBC-SSTTEEECSTTBTTC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCccChhhhhcccccceeEeccCCCEEeCCcccc-CCCCeEEcccccCcc-hHHHHHHHHhHHHHHHHHHHHHh
Confidence 9999999999998887653 1236678899999999998 899999999999863 45889999999999999999886
Q ss_pred C
Q 017664 305 G 305 (368)
Q Consensus 305 g 305 (368)
+
T Consensus 310 ~ 310 (311)
T 2q0l_A 310 H 310 (311)
T ss_dssp C
T ss_pred h
Confidence 5
No 67
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.9e-37 Score=281.74 Aligned_cols=283 Identities=16% Similarity=0.180 Sum_probs=202.4
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC----ceeeeccceeeee-cccccc-----cceeeccccc--
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE----YFEITWASLRAVV-EPSFAV-----RSVINHGDYL-- 77 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~----~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~-- 77 (368)
+.+.+++||+|||||++||++|..|+ +|++|+|||+++ ..+..+....... .+.+.. +......++.
T Consensus 17 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (338)
T 3itj_A 17 RGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTK 96 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHH
Confidence 34446789999999999999999998 599999999965 3443332211100 011110 0000011111
Q ss_pred CceeEEEeEEEEeecc----EEEe---cCCeEEEecEEEEecCCCCCCCCchHHH------HHHHHHHHHH--HhcCCeE
Q 017664 78 SNVKIVVSTAVSITDT----EVVT---AGGQTFVYDYVVVATGHVESVPKSRTER------LSQYEKDFEK--VKSANSV 142 (368)
Q Consensus 78 ~~~~~~~~~~~~~~~~----~v~~---~~g~~~~~d~lvlAtG~~~~~p~~~~~~------~~~~~~~~~~--~~~~~~v 142 (368)
.++++....+..++.. .+.+ .++..+.||+||+|||+.|..|+++... +......... ...++++
T Consensus 97 ~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v 176 (338)
T 3itj_A 97 FGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPL 176 (338)
T ss_dssp TTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEE
T ss_pred cCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEE
Confidence 2677777667777643 3333 3667899999999999997766654322 1111222222 3468999
Q ss_pred EEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcC
Q 017664 143 LIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETS 218 (368)
Q Consensus 143 ~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~ 218 (368)
+|||+|++|+|+|..|.+ .+.+|+++++.+.+.+ ...+.+.+.+ .||++++++.+.+++.+++ .+.+.
T Consensus 177 ~vvG~G~~g~e~a~~l~~--~g~~v~~v~~~~~~~~------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~ 248 (338)
T 3itj_A 177 AVIGGGDSACEEAQFLTK--YGSKVFMLVRKDHLRA------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIK 248 (338)
T ss_dssp EEECSSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEE
T ss_pred EEECCCHHHHHHHHHHHh--cCCEEEEEEcCCccCC------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEE
Confidence 999999999999999985 4889999999887643 3445566655 4999999999999987664 36555
Q ss_pred C-----CcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEe-CCCeeecCCCCeEEecccCCCCccchHHHHHHHH
Q 017664 219 S-----GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMV-DENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHA 292 (368)
Q Consensus 219 ~-----g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~v-d~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g 292 (368)
+ ++++++|.||+|+|+.|+.+++.. ++ .++++|++.+ |+++++ +.|||||+|||+.. .++.+..|+.||
T Consensus 249 ~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l--~~~~~G~i~v~~~~~~t-~~~~vya~GD~~~~-~~~~~~~A~~~g 323 (338)
T 3itj_A 249 NTKKNEETDLPVSGLFYAIGHTPATKIVAG-QV--DTDEAGYIKTVPGSSLT-SVPGFFAAGDVQDS-KYRQAITSAGSG 323 (338)
T ss_dssp ETTTTEEEEEECSEEEECSCEEECCGGGBT-TB--CBCTTSCBCCCTTSSBC-SSTTEEECGGGGCS-SCCCHHHHHHHH
T ss_pred ECCCCceEEEEeCEEEEEeCCCCChhHhhC-ce--EecCCCcEEEcCccccc-CCCCEEEeeccCCC-Cccceeeehhhh
Confidence 4 468999999999999999988876 44 6788999985 778887 89999999999975 345789999999
Q ss_pred HHHHHHHHHHHcCC
Q 017664 293 LVTAKNLKKLMMGR 306 (368)
Q Consensus 293 ~~aa~~i~~~l~g~ 306 (368)
+.||.||.+.|.++
T Consensus 324 ~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 324 CMAALDAEKYLTSL 337 (338)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999875
No 68
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-36 Score=278.06 Aligned_cols=286 Identities=17% Similarity=0.210 Sum_probs=206.5
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceee----eeccccc---ccce-eeccccc--CceeE
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRA----VVEPSFA---VRSV-INHGDYL--SNVKI 82 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~----~~~~~~~---~~~~-~~~~~~~--~~~~~ 82 (368)
++++||+|||||+||+++|..|+ +|++|+|||+++.+++.|..... ...+.+. ...+ ....+.. .++++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 45689999999999999999997 59999999999887654421100 0000000 0000 0001111 13444
Q ss_pred E-EeEEEEeecc----EEEecCCeEEEecEEEEecCCC---CCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCc
Q 017664 83 V-VSTAVSITDT----EVVTAGGQTFVYDYVVVATGHV---ESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGG 148 (368)
Q Consensus 83 ~-~~~~~~~~~~----~v~~~~g~~~~~d~lvlAtG~~---~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g 148 (368)
. +..+..++.. .+.+.++..+.||+||+|||+. |..|+++... +....... ....+++++|||+|
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~v~viG~G 161 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK-AEFQGKRVLIVGGG 161 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG-GGGTTCEEEEECSS
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch-hhcCCCEEEEECCC
Confidence 3 3355555432 4666777789999999999994 5544433211 10100000 12257999999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcC---CC--c
Q 017664 149 PTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETS---SG--E 221 (368)
Q Consensus 149 ~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~---~g--~ 221 (368)
++|+|+|..|.+ .+.+|+++++.+.+.+ .+...+.+.+.+++.||++++++.+.+++.+++ .+.+. +| +
T Consensus 162 ~~g~e~a~~l~~--~g~~V~~v~~~~~~~~--~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 237 (335)
T 2zbw_A 162 DSAVDWALNLLD--TARRITLIHRRPQFRA--HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEEL 237 (335)
T ss_dssp HHHHHHHHHTTT--TSSEEEEECSSSSCCS--CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEE
T ss_pred HHHHHHHHHHHh--hCCEEEEEEcCCccCc--cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceE
Confidence 999999999984 4789999999887654 246677888889999999999999999887544 46654 66 5
Q ss_pred EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC-ccchHHHHHHHHHHHHHHHH
Q 017664 222 TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-EIKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 222 ~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~-~~~~~~~a~~~g~~aa~~i~ 300 (368)
++++|.+|+++|++|+.+++...++ ..+ +|++.||+++|+ +.|||||+|||+..+ .++++..|..||+.+|+||.
T Consensus 238 ~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 238 ALEVDAVLILAGYITKLGPLANWGL--ALE-KNKIKVDTTMAT-SIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp EEECSEEEECCCEEEECGGGGGSCC--CEE-TTEEECCTTCBC-SSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEecCEEEEeecCCCCchHhhhcce--ecc-CCeeeeCCCCCC-CCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 8999999999999999888877655 444 689999999998 899999999999754 34688999999999999999
Q ss_pred HHHcCCCC
Q 017664 301 KLMMGRNK 308 (368)
Q Consensus 301 ~~l~g~~~ 308 (368)
+.+.+...
T Consensus 314 ~~l~~~~~ 321 (335)
T 2zbw_A 314 AYANPALK 321 (335)
T ss_dssp HHHCTTSC
T ss_pred HHhhhhhc
Confidence 99987654
No 69
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.9e-36 Score=279.91 Aligned_cols=289 Identities=20% Similarity=0.236 Sum_probs=205.3
Q ss_pred CcCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceee----eeccccc---ccce-eeccccc--C
Q 017664 10 AAGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRA----VVEPSFA---VRSV-INHGDYL--S 78 (368)
Q Consensus 10 ~~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~----~~~~~~~---~~~~-~~~~~~~--~ 78 (368)
...|++++||+||||||+|+++|..|+ +|++|+|||+++.+++.+..... ...+.+. ...+ ....+.. .
T Consensus 8 ~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 87 (360)
T 3ab1_A 8 ATDHHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERY 87 (360)
T ss_dssp -----CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTT
T ss_pred ccccCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 344566789999999999999999997 59999999999877654421100 0000000 0000 0000000 1
Q ss_pred ceeEEE-eEEEEeec--c---EEEecCCeEEEecEEEEecCCC---CCCCCchH--HHH-----HHHHHHHHHHhcCCeE
Q 017664 79 NVKIVV-STAVSITD--T---EVVTAGGQTFVYDYVVVATGHV---ESVPKSRT--ERL-----SQYEKDFEKVKSANSV 142 (368)
Q Consensus 79 ~~~~~~-~~~~~~~~--~---~v~~~~g~~~~~d~lvlAtG~~---~~~p~~~~--~~~-----~~~~~~~~~~~~~~~v 142 (368)
++++.. ..+..++. + .+.+.++..+.||+||+|||+. |..|+++. ..+ ....... ....++++
T Consensus 88 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~-~~~~~~~v 166 (360)
T 3ab1_A 88 NPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSV-EDFKGKRV 166 (360)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCG-GGGTTCEE
T ss_pred CCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCH-HHcCCCcE
Confidence 344433 35555543 2 5777788889999999999994 54444332 111 0100000 12247899
Q ss_pred EEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEc--
Q 017664 143 LIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIET-- 217 (368)
Q Consensus 143 ~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~-- 217 (368)
+|||+|++|+|+|..|.+ .+.+|+++++.+.+.+. +...+.+.+.+++.||++++++.+.+++.+++ .+.+
T Consensus 167 vVvG~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~~--~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~ 242 (360)
T 3ab1_A 167 VIVGGGDSALDWTVGLIK--NAASVTLVHRGHEFQGH--GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRS 242 (360)
T ss_dssp EEECSSHHHHHHHHHTTT--TSSEEEEECSSSSCSSC--SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCCHHHHHHHHHHHh--cCCEEEEEEcCCCCCCC--HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEe
Confidence 999999999999999885 48899999998876542 45667778888899999999999999887644 4555
Q ss_pred CCC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC-ccchHHHHHHHHHH
Q 017664 218 SSG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-EIKQGYLAQKHALV 294 (368)
Q Consensus 218 ~~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~-~~~~~~~a~~~g~~ 294 (368)
.+| +++++|.+|+|+|+.|+.+++...++ ..+ +|++.||+++|+ +.|+|||+|||+..+ .++++..|..||+.
T Consensus 243 ~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~--~~~-~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~ 318 (360)
T 3ab1_A 243 SDGSKWTVEADRLLILIGFKSNLGPLARWDL--ELY-ENALVVDSHMKT-SVDGLYAAGDIAYYPGKLKIIQTGLSEATM 318 (360)
T ss_dssp TTCCEEEEECSEEEECCCBCCSCGGGGGSSC--CEE-TTEEECCTTSBC-SSTTEEECSTTEECTTCCCSHHHHHHHHHH
T ss_pred cCCCeEEEeCCEEEECCCCCCCHHHHHhhcc--ccc-cCeeeecCCCcC-CCCCEEEecCccCCCCccceeehhHHHHHH
Confidence 367 58999999999999999888876655 444 689999999998 899999999999754 35688999999999
Q ss_pred HHHHHHHHHcCCC
Q 017664 295 TAKNLKKLMMGRN 307 (368)
Q Consensus 295 aa~~i~~~l~g~~ 307 (368)
||+||.+.+.+..
T Consensus 319 aa~~i~~~l~~~~ 331 (360)
T 3ab1_A 319 AVRHSLSYIKPGE 331 (360)
T ss_dssp HHHHHHHHHSCC-
T ss_pred HHHHHHhhcCCcc
Confidence 9999999998764
No 70
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=6.5e-36 Score=270.59 Aligned_cols=277 Identities=22% Similarity=0.265 Sum_probs=200.0
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceee---eecccc-cccce-eeccccc--CceeEEEe-E
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRA---VVEPSF-AVRSV-INHGDYL--SNVKIVVS-T 86 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~---~~~~~~-~~~~~-~~~~~~~--~~~~~~~~-~ 86 (368)
++||+||||||+|+++|..|++ |++|+|||+. .+..+..... ...... ....+ ....+++ .+++++.. +
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 78 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQS 78 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCE
Confidence 3799999999999999999985 9999999864 3322221100 000000 00000 0111111 25677766 6
Q ss_pred EEEeec-------cEEEecCCeEEEecEEEEecCCCCCCCCchH------HHHHHHHHHHHHHhcCCeEEEEcCchhHHH
Q 017664 87 AVSITD-------TEVVTAGGQTFVYDYVVVATGHVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVE 153 (368)
Q Consensus 87 ~~~~~~-------~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~------~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e 153 (368)
+..++. ..+.+.++..+.||+||+|||+.|..|+++. ..+..+.........+++++|+|+|++|+|
T Consensus 79 v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e 158 (310)
T 1fl2_A 79 ASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVE 158 (310)
T ss_dssp EEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHH
T ss_pred EEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHH
Confidence 777753 2567778888999999999999865554322 112222222234456899999999999999
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcC---CCc--EEe
Q 017664 154 LAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETS---SGE--TID 224 (368)
Q Consensus 154 ~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~---~g~--~i~ 224 (368)
+|..|.+ .+.+|+++++.+.+. .+ ..+.+.+++ .||++++++.+.++..+++ .+++. +|+ +++
T Consensus 159 ~A~~l~~--~g~~Vtlv~~~~~~~--~~----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~ 230 (310)
T 1fl2_A 159 AAIDLAG--IVEHVTLLEFAPEMK--AD----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIE 230 (310)
T ss_dssp HHHHHHT--TBSEEEEECSSSSCC--SC----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEE
T ss_pred HHHHHHH--hCCEEEEEEeCcccC--cc----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEE
Confidence 9999984 578999999988752 22 345566776 6999999999999886644 35543 353 789
Q ss_pred cCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHc
Q 017664 225 TDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 225 ~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
+|.+|+|+|++|+.+++... + .++++|++.||+++|+ +.|+|||+|||+..+. +++..|..||+.||.+|.+.|.
T Consensus 231 ~D~vi~a~G~~p~~~~l~~~-l--~~~~~g~i~vd~~~~t-~~~~vya~GD~~~~~~-~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 231 LAGIFVQIGLLPNTNWLEGA-V--ERNRMGEIIIDAKCET-NVKGVFAAGDCTTVPY-KQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSEEEECSCEEESCGGGTTT-S--CBCTTSCBCCCTTCBC-SSTTEEECSTTBSCSS-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEeeCCccCchHHhcc-c--cccCCCcEEcCCCCcc-CCCCEEEeecccCCcc-hhhhhhHhhHHHHHHHHHHHHH
Confidence 99999999999998888652 3 6778899999999997 8999999999998753 4788999999999999999987
Q ss_pred CCC
Q 017664 305 GRN 307 (368)
Q Consensus 305 g~~ 307 (368)
++.
T Consensus 306 ~~~ 308 (310)
T 1fl2_A 306 RTK 308 (310)
T ss_dssp HSC
T ss_pred Hhc
Confidence 753
No 71
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.4e-36 Score=274.72 Aligned_cols=284 Identities=19% Similarity=0.219 Sum_probs=201.4
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeee-eccccc----ccce-eeccccc--Ccee
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAV-VEPSFA----VRSV-INHGDYL--SNVK 81 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~-~~~~~~----~~~~-~~~~~~~--~~~~ 81 (368)
+.+++++||+||||||+|+++|..|+ .|++|+|||+.. .+..+...... ..+.+. ...+ ....++. .+++
T Consensus 9 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 87 (335)
T 2a87_A 9 RAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGAD 87 (335)
T ss_dssp -CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCE
T ss_pred cccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCE
Confidence 34456789999999999999999997 499999999763 33322111000 000110 0000 0111111 2566
Q ss_pred EEEeEEEEeec---cEE-EecCCeEEEecEEEEecCCCCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCchhH
Q 017664 82 IVVSTAVSITD---TEV-VTAGGQTFVYDYVVVATGHVESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGGPTG 151 (368)
Q Consensus 82 ~~~~~~~~~~~---~~v-~~~~g~~~~~d~lvlAtG~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g~~~ 151 (368)
++...+..++. ..+ .+.+++.+.||+||+|||+.|..|+++... ++.+.........+++++|||+|++|
T Consensus 88 ~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g 167 (335)
T 2a87_A 88 LRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSA 167 (335)
T ss_dssp EECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHH
T ss_pred EEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHH
Confidence 76666666664 256 677788899999999999997777654322 11112222234568999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcC---CC--cEEe
Q 017664 152 VELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETS---SG--ETID 224 (368)
Q Consensus 152 ~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~---~g--~~i~ 224 (368)
+|+|..|.+ .+.+|+++++.+.+.. .+.+ ..+.+++.||++++++.+.+++.+++ .+.+. +| ++++
T Consensus 168 ~e~a~~l~~--~g~~V~l~~~~~~~~~--~~~~---~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~ 240 (335)
T 2a87_A 168 MEEATFLTR--FARSVTLVHRRDEFRA--SKIM---LDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLP 240 (335)
T ss_dssp HHHHHHHTT--TCSEEEEECSSSSCSS--CTTH---HHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEEC
T ss_pred HHHHHHHHH--hCCeEEEEEcCCcCCc--cHHH---HHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEee
Confidence 999999984 5889999999877532 1122 12445789999999999999887654 35543 34 5899
Q ss_pred cCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHc
Q 017664 225 TDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 225 ~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
+|.+|+|+|++|+.+++. .++ .++++|++.||++++.++.|||||+|||+..+ ++++..|..||+.||.||.+.|.
T Consensus 241 ~D~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 241 VTGVFVAIGHEPRSGLVR-EAI--DVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp CSCEEECSCEEECCTTTB-TTB--CBCTTSCBCCSTTSSBCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEccCCccChhHhh-ccc--ccCCCccEEeCCCCCccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhh
Confidence 999999999999988876 333 56788999999974333899999999999864 45789999999999999999987
Q ss_pred CC
Q 017664 305 GR 306 (368)
Q Consensus 305 g~ 306 (368)
++
T Consensus 317 ~~ 318 (335)
T 2a87_A 317 EH 318 (335)
T ss_dssp HH
T ss_pred cC
Confidence 65
No 72
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=3.3e-36 Score=274.84 Aligned_cols=279 Identities=18% Similarity=0.187 Sum_probs=201.9
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecccee----eeeccccc----ccceeeccccc--CceeEE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLR----AVVEPSFA----VRSVINHGDYL--SNVKIV 83 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~--~~~~~~ 83 (368)
+++||+|||||+||+++|..|+ +|++|+|||+++.+++.|.... ....+.+. .+......++. .++++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 3579999999999999999997 5999999999998775542100 00000110 00001111111 145655
Q ss_pred -EeEEEEeec--c---EEEecCCeEEEecEEEEecCC---CCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCc
Q 017664 84 -VSTAVSITD--T---EVVTAGGQTFVYDYVVVATGH---VESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGG 148 (368)
Q Consensus 84 -~~~~~~~~~--~---~v~~~~g~~~~~d~lvlAtG~---~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g 148 (368)
..++..++. + .+.+.+++ +.||+||+|||+ .|..|+++... ++. .........+++++|+|+|
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g 163 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGG 163 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSS
T ss_pred ccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCC
Confidence 356666653 2 56676665 999999999999 66555443211 111 0001112247999999999
Q ss_pred hhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC-----Cc
Q 017664 149 PTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS-----GE 221 (368)
Q Consensus 149 ~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~-----g~ 221 (368)
.+|+|+|..|.+ .+.+|+++++.+++.+. ....+.+++.||++++++.+.+++.+++ .+.+.+ ++
T Consensus 164 ~~~~e~a~~l~~--~~~~v~~~~~~~~~~~~------~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~ 235 (332)
T 3lzw_A 164 DSAVDWALMLEP--IAKEVSIIHRRDKFRAH------EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKE 235 (332)
T ss_dssp HHHHHHHHHHTT--TBSEEEEECSSSSCSSC------HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEE
T ss_pred HhHHHHHHHHHh--hCCeEEEEEecCcCCcc------HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceE
Confidence 999999999985 47899999998876432 2234557889999999999999887654 455544 45
Q ss_pred EEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCC-ccchHHHHHHHHHHHHHHHH
Q 017664 222 TIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-EIKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 222 ~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~-~~~~~~~a~~~g~~aa~~i~ 300 (368)
++++|.+|+++|+.|+.+++...++ .. ++|++.||+++|+ +.|||||+|||+..+ .++++..|..||+.||+||.
T Consensus 236 ~~~~D~vv~a~G~~p~~~~~~~~~~--~~-~~g~i~vd~~~~t-~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 236 ILEIDDLIVNYGFVSSLGPIKNWGL--DI-EKNSIVVKSTMET-NIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp EEECSEEEECCCEECCCGGGGGSSC--CE-ETTEEECCTTSBC-SSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred EEECCEEEEeeccCCCchHHhhcCc--cc-cCCeEEeCCCCce-ecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 7999999999999999998877666 44 5799999999998 899999999998653 45689999999999999999
Q ss_pred HHHcCCC
Q 017664 301 KLMMGRN 307 (368)
Q Consensus 301 ~~l~g~~ 307 (368)
+.+.++.
T Consensus 312 ~~l~~~~ 318 (332)
T 3lzw_A 312 AYMDPKA 318 (332)
T ss_dssp HHHCTTS
T ss_pred HhhChhh
Confidence 9998764
No 73
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=1e-35 Score=271.96 Aligned_cols=279 Identities=18% Similarity=0.218 Sum_probs=197.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcC----CCceeeeccceeeee-cccccc----cce-eeccccc--Ccee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDE----KEYFEITWASLRAVV-EPSFAV----RSV-INHGDYL--SNVK 81 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~----~~~~~~~~~~~~~~~-~~~~~~----~~~-~~~~~~~--~~~~ 81 (368)
+++||+||||||+|+++|..|+ .|++|+|+|+ ....+..+....... .+.+.. ..+ ....++. .+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 4589999999999999999998 4999999998 333332221110000 011100 000 0011111 2567
Q ss_pred EEEeEEEEeecc----EEEecCCeEEEecEEEEecCCCCCCCCchH----------HHHHHHHHHHHHH--hcCCeEEEE
Q 017664 82 IVVSTAVSITDT----EVVTAGGQTFVYDYVVVATGHVESVPKSRT----------ERLSQYEKDFEKV--KSANSVLIV 145 (368)
Q Consensus 82 ~~~~~~~~~~~~----~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~----------~~~~~~~~~~~~~--~~~~~v~Vv 145 (368)
++...+..++.. ++.+ ++..++||+||+|||+.|..|+++. ..++.+....... ..+++++|+
T Consensus 87 ~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv 165 (333)
T 1vdc_A 87 IFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVI 165 (333)
T ss_dssp EECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEE
T ss_pred EEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEE
Confidence 766666666642 4555 7788999999999999866554332 1111112222222 568999999
Q ss_pred cCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHH-HHHHcCCcEEEecceeeecccCC---C--eEEcC-
Q 017664 146 GGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIAL-DWLTSKKVEVILNQSVTLNTISD---G--LIETS- 218 (368)
Q Consensus 146 G~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~-~~l~~~gv~i~~~~~v~~i~~~~---~--~v~~~- 218 (368)
|+|++|+|+|..|.+ .+.+|+++++.+.+.. ...+. +.+++.||++++++.+.+++.++ . .+.+.
T Consensus 166 G~G~~g~e~A~~l~~--~g~~V~lv~~~~~~~~------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~ 237 (333)
T 1vdc_A 166 GGGDSAMEEANFLTK--YGSKVYIIHRRDAFRA------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKN 237 (333)
T ss_dssp CCSHHHHHHHHHHTT--TSSEEEEECSSSSCCS------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEE
T ss_pred CCChHHHHHHHHHHh--cCCeEEEEecCCcCCc------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEe
Confidence 999999999999984 4789999999876532 22333 45678999999999999988765 2 25553
Q ss_pred --CC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCe-eecCCCCeEEecccCCCCccchHHHHHHHHH
Q 017664 219 --SG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL-RVRGFKNVFAIGDITDIPEIKQGYLAQKHAL 293 (368)
Q Consensus 219 --~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~-~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~ 293 (368)
+| +++++|.+|+++|++|+.+++. .++ .++++|++.||+++ ++ +.|+|||+|||+..+ ++++..|..||+
T Consensus 238 ~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l--~~~~~G~i~vd~~~~~t-~~~~vya~GD~~~~~-~~~~~~A~~~g~ 312 (333)
T 1vdc_A 238 VVTGDVSDLKVSGLFFAIGHEPATKFLD-GGV--ELDSDGYVVTKPGTTQT-SVPGVFAAGDVQDKK-YRQAITAAGTGC 312 (333)
T ss_dssp TTTCCEEEEECSEEEECSCEEESCGGGT-TSS--CBCTTSCBCCCTTSCBC-SSTTEEECGGGGCSS-CCCHHHHHHHHH
T ss_pred cCCCceEEEecCEEEEEeCCccchHHhh-ccc--cccCCCCEEechhhccc-CCCCEEEeeeccCCC-chhHHHHHHhHH
Confidence 45 5799999999999999998876 333 56788999999975 65 899999999999864 457899999999
Q ss_pred HHHHHHHHHHcCCC
Q 017664 294 VTAKNLKKLMMGRN 307 (368)
Q Consensus 294 ~aa~~i~~~l~g~~ 307 (368)
.||.+|.+.|.+++
T Consensus 313 ~aa~~i~~~l~~~~ 326 (333)
T 1vdc_A 313 MAALDAEHYLQEIG 326 (333)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998765
No 74
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=2.9e-34 Score=277.01 Aligned_cols=278 Identities=21% Similarity=0.247 Sum_probs=200.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecccee---eeecccc-cccce-eecccc--cCceeEEEe
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLR---AVVEPSF-AVRSV-INHGDY--LSNVKIVVS 85 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~---~~~~~~~-~~~~~-~~~~~~--~~~~~~~~~ 85 (368)
...+||+||||||||+++|.+|+ +|++|+|+|+. +|+.+.... ....... ....+ ....+. ..+++++..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcC
Confidence 34689999999999999999997 59999999874 333222110 0000000 00000 001111 125777766
Q ss_pred -EEEEeec-------cEEEecCCeEEEecEEEEecCCCCCCCCchHH------HHHHHHHHHHHHhcCCeEEEEcCchhH
Q 017664 86 -TAVSITD-------TEVVTAGGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEKVKSANSVLIVGGGPTG 151 (368)
Q Consensus 86 -~~~~~~~-------~~v~~~~g~~~~~d~lvlAtG~~~~~p~~~~~------~~~~~~~~~~~~~~~~~v~VvG~g~~~ 151 (368)
++..++. ..+.+.+|..+.||+||+|||+.|..|++++. .+..+.........+++++|||+|++|
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g 367 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSG 367 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHH
T ss_pred CEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHH
Confidence 6777753 25777788889999999999998655443321 111111111233468999999999999
Q ss_pred HHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcC---CCc--E
Q 017664 152 VELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETS---SGE--T 222 (368)
Q Consensus 152 ~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~---~g~--~ 222 (368)
+|+|..|.+. +.+|+++++.+.+.. + ..+.+.+++ .||++++++.++++..+++ .+.+. +|+ +
T Consensus 368 ~E~A~~L~~~--g~~Vtlv~~~~~l~~--~----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~ 439 (521)
T 1hyu_A 368 VEAAIDLAGI--VEHVTLLEFAPEMKA--D----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHS 439 (521)
T ss_dssp HHHHHHHHHH--BSEEEEECSSSSCCS--C----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEE
T ss_pred HHHHHHHHhh--CCEEEEEEeCcccCc--C----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEE
Confidence 9999999863 789999999887642 1 446667777 6999999999999887644 34443 353 7
Q ss_pred EecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHH
Q 017664 223 IDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKL 302 (368)
Q Consensus 223 i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~ 302 (368)
+++|.+++++|++|+.+++.. . +.++++|++.||+++|| +.|||||+|||+..+ .+++..|+.+|+.||.+|.++
T Consensus 440 i~~D~vi~a~G~~pn~~~l~~-~--l~~~~~G~I~Vd~~~~t-s~p~VfA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~ 514 (521)
T 1hyu_A 440 VALAGIFVQIGLLPNTHWLEG-A--LERNRMGEIIIDAKCET-SVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDY 514 (521)
T ss_dssp EECSEEEECCCEEESCGGGTT-T--SCBCTTSCBCCCTTCBC-SSTTEEECSTTBCCS-SCCHHHHHHHHHHHHHHHHHH
T ss_pred EEcCEEEECcCCCCCchHHhh-h--hccCCCCcEEeCCCCCC-CCCCEEEeecccCCC-cceeeehHHhHHHHHHHHHHH
Confidence 899999999999999988875 2 36788899999999998 899999999999875 357899999999999999998
Q ss_pred HcCC
Q 017664 303 MMGR 306 (368)
Q Consensus 303 l~g~ 306 (368)
|.++
T Consensus 515 L~~~ 518 (521)
T 1hyu_A 515 LIRT 518 (521)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8664
No 75
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=4.9e-35 Score=277.03 Aligned_cols=276 Identities=18% Similarity=0.128 Sum_probs=187.1
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccc-eeeeecccccccceeeccccc--CceeEEEeEEEE
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWAS-LRAVVEPSFAVRSVINHGDYL--SNVKIVVSTAVS 89 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 89 (368)
.+.+||+|||||||||++|..|++ |++|+|||+++.+|+.+.. +.. ............+++ .+++++....+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~---~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPG---FKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCT---TTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCC---ccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 457899999999999999999985 9999999999877643221 100 001111111111111 145554433221
Q ss_pred eeccEEEecCCeEEEecEEEEecCCC-C---CCCCchHHHHHH---HHHHH------H---------HHhcCCeEEEEcC
Q 017664 90 ITDTEVVTAGGQTFVYDYVVVATGHV-E---SVPKSRTERLSQ---YEKDF------E---------KVKSANSVLIVGG 147 (368)
Q Consensus 90 ~~~~~v~~~~g~~~~~d~lvlAtG~~-~---~~p~~~~~~~~~---~~~~~------~---------~~~~~~~v~VvG~ 147 (368)
..+.+.+. .+.||+||+|||+. | .+|+.....+.. +.... . ....+++|+|||+
T Consensus 197 ---~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGg 272 (456)
T 2vdc_G 197 ---RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGG 272 (456)
T ss_dssp ---TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECS
T ss_pred ---cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECC
Confidence 12222222 25699999999997 3 344433222111 11100 0 0134789999999
Q ss_pred chhHHHHHHHHhhhCCCCeEEEEecCccc-ccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEc-------
Q 017664 148 GPTGVELAGEIAVDFPDKKVILVHRGPKL-LEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIET------- 217 (368)
Q Consensus 148 g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~------- 217 (368)
|++|+|+|..+.+ ....+|++++|++.. ++..+. ..+.+++.||++++++.+.++..++. .+++
T Consensus 273 G~~a~d~A~~~~r-~Ga~~Vtiv~r~~~~~~p~~~~-----e~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~ 346 (456)
T 2vdc_G 273 GDTAMDCVRTAIR-QGATSVKCLYRRDRKNMPGSQR-----EVAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGV 346 (456)
T ss_dssp SHHHHHHHHHHHH-TTCSEEEEECSSCSTTCSSCHH-----HHHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEE
T ss_pred ChhHHHHHHHHHH-cCCCEEEEEEeCCccCCCCCHH-----HHHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecc
Confidence 9999999998875 223469999998765 443322 24567888999999999887764321 1121
Q ss_pred --C---------CC--cEEecCEEEEccCCCCCch--hhhccccccccCCCCcEEeCCC-eeecCCCCeEEecccCCCCc
Q 017664 218 --S---------SG--ETIDTDCHFMCTGKAMASS--WLRETILKDSLDGRGRLMVDEN-LRVRGFKNVFAIGDITDIPE 281 (368)
Q Consensus 218 --~---------~g--~~i~~d~vi~a~G~~p~~~--~~~~~~l~~~~~~~g~i~vd~~-~~~~~~~~ifa~GD~~~~~~ 281 (368)
. +| +++++|.||+|+|+.|+.. ++...++ .++++|++.||++ +|| +.|+|||+|||+..+
T Consensus 347 ~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl--~~~~~G~i~vd~~~~~T-s~~~VfA~GD~~~g~- 422 (456)
T 2vdc_G 347 ADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPEL--KVTRWGTLLVDHRTKMT-NMDGVFAAGDIVRGA- 422 (456)
T ss_dssp EEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTS--CBCTTSSBCCCTTTCBC-SSTTEEECGGGGSSC-
T ss_pred cCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCe--eECCCCCEEECCCCCcC-CCCCEEEeccccCCc-
Confidence 1 23 4799999999999999865 6665554 6788999999997 997 899999999998765
Q ss_pred cchHHHHHHHHHHHHHHHHHHHcCCC
Q 017664 282 IKQGYLAQKHALVTAKNLKKLMMGRN 307 (368)
Q Consensus 282 ~~~~~~a~~~g~~aa~~i~~~l~g~~ 307 (368)
+++..|+.||+.||.+|.++|.++.
T Consensus 423 -~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 423 -SLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4789999999999999999998753
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.6e-34 Score=266.39 Aligned_cols=293 Identities=17% Similarity=0.247 Sum_probs=197.2
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCceeeecccee---eeecccc------------------------
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEYFEITWASLR---AVVEPSF------------------------ 65 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~~~~~~~~~~---~~~~~~~------------------------ 65 (368)
+++||+|||||++|+++|..|+ .|. +|+|||+++ +|..|.... ....+.+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 3589999999999999999998 488 999999997 443221100 0000000
Q ss_pred ---cc-cceee-ccccc--CceeEEEe-EEEEeecc----EEEecCCeEEEecEEEEecCCC--CCCCCchHHHHHHHHH
Q 017664 66 ---AV-RSVIN-HGDYL--SNVKIVVS-TAVSITDT----EVVTAGGQTFVYDYVVVATGHV--ESVPKSRTERLSQYEK 131 (368)
Q Consensus 66 ---~~-~~~~~-~~~~~--~~~~~~~~-~~~~~~~~----~v~~~~g~~~~~d~lvlAtG~~--~~~p~~~~~~~~~~~~ 131 (368)
.. ..+.. ...+. .+++++.. .+..++.. .+.+.++ .+.||+||+|||+. |.+|+ ...+ +...
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~p~ip~--~~~~-~~~~ 157 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNFPKKPF--KYGI-HYSE 157 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTSBCCCS--SSCE-EGGG
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCccCCCC--Ccee-chhh
Confidence 00 00000 00111 14566544 46656532 5666555 68999999999997 55664 1111 1111
Q ss_pred HHH-HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------cCchhHHHHHHHHHcCC-cEEEec
Q 017664 132 DFE-KVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------VGSRASQIALDWLTSKK-VEVILN 202 (368)
Q Consensus 132 ~~~-~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------~~~~~~~~~~~~l~~~g-v~i~~~ 202 (368)
... .....++++|||+|++|+|+|..|.+ .+.+|+++++.+.+++. +++...+.+.+.+++.| |+++++
T Consensus 158 ~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~--~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~ 235 (369)
T 3d1c_A 158 IEDFDNFNKGQYVVIGGNESGFDAAYQLAK--NGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVH 235 (369)
T ss_dssp CSCGGGSCSSEEEEECCSHHHHHHHHHHHH--TTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCChhhcCCCEEEEECCCcCHHHHHHHHHh--cCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecC
Confidence 111 11246799999999999999999986 47899999998876631 34556688888999997 999999
Q ss_pred ceeeecccCCC--eEEcCCCcEEe-cCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCC
Q 017664 203 QSVTLNTISDG--LIETSSGETID-TDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDI 279 (368)
Q Consensus 203 ~~v~~i~~~~~--~v~~~~g~~i~-~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~ 279 (368)
+.|.+++.+++ .+.+.+|++++ +|.+|+++|++|+.+++....+ . +++|++.||++++.++.|||||+|||+..
T Consensus 236 ~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~--~-~~~g~i~v~~~~~~t~~~~v~a~GD~~~~ 312 (369)
T 3d1c_A 236 YTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLF--V-TTNQDIKLTTHDESTRYPNIFMIGATVEN 312 (369)
T ss_dssp CCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHS--C-CTTSCCCBCTTSBBSSSTTEEECSTTCCC
T ss_pred cEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhc--c-CCCCCEEechhhcccCCCCeEEecccccc
Confidence 99998865444 57788887665 6999999999999877665444 3 67899999997665689999999999987
Q ss_pred Cccc--hHHHHHHHHHHHHHHHHHHHcCCCC-CCccccccC
Q 017664 280 PEIK--QGYLAQKHALVTAKNLKKLMMGRNK-GTMATYKPG 317 (368)
Q Consensus 280 ~~~~--~~~~a~~~g~~aa~~i~~~l~g~~~-~~~~~~~~~ 317 (368)
+... ....+.+||+.+|++|...+...+. ..+..|.|.
T Consensus 313 ~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~~~ 353 (369)
T 3d1c_A 313 DNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKN 353 (369)
T ss_dssp SSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHHHT
T ss_pred CCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHHhc
Confidence 5433 2356788999999999987654332 134566553
No 77
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6.3e-34 Score=262.19 Aligned_cols=279 Identities=18% Similarity=0.220 Sum_probs=184.8
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceee------------eeccccc--c------cceee-
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRA------------VVEPSFA--V------RSVIN- 72 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~------------~~~~~~~--~------~~~~~- 72 (368)
+++||+|||||++|+++|..|+ +|++|+|||+++.++..|..... ....... . ..+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 3579999999999999999998 59999999999887655432100 0000000 0 00000
Q ss_pred ccccc--CceeEEE-eEEEEeec--c--E-EEecCCeEEEecEEEEecCC--CCCCCCchHHH------HHHHHHHHHHH
Q 017664 73 HGDYL--SNVKIVV-STAVSITD--T--E-VVTAGGQTFVYDYVVVATGH--VESVPKSRTER------LSQYEKDFEKV 136 (368)
Q Consensus 73 ~~~~~--~~~~~~~-~~~~~~~~--~--~-v~~~~g~~~~~d~lvlAtG~--~~~~p~~~~~~------~~~~~~~~~~~ 136 (368)
..++. .++++.. .++..++. + . +.+.++ .+.||+||+|||. .|.+|.++... ++.........
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 160 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTPAP 160 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGG
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCChhh
Confidence 00000 1445543 35555543 2 3 666666 8999999999996 45455443211 11111111123
Q ss_pred hcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC-ccccccc--CchhHHHHHHHHH--------------------
Q 017664 137 KSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRG-PKLLEFV--GSRASQIALDWLT-------------------- 193 (368)
Q Consensus 137 ~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~-~~~l~~~--~~~~~~~~~~~l~-------------------- 193 (368)
..+++++|||+|++|+|+|..|.+. + +|+++.+. +.+++.. ...+...+.+.++
T Consensus 161 ~~~~~v~VvG~G~~g~e~a~~l~~~--~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (357)
T 4a9w_A 161 FAGMRVAIIGGGNSGAQILAEVSTV--A-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVM 237 (357)
T ss_dssp GTTSEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHhh--C-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCccc
Confidence 3579999999999999999999853 4 69999987 4554432 1222222222222
Q ss_pred --------cCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCC--ee
Q 017664 194 --------SKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN--LR 263 (368)
Q Consensus 194 --------~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~--~~ 263 (368)
+.|+ +..+..+.+++. ..+.+.+|+++++|.+|+++|++|+.+++...++ . +++|++.||++ ++
T Consensus 238 ~~~~~~~~~~g~-i~~~~~v~~~~~--~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl--~-~~~G~i~vd~~~l~~ 311 (357)
T 4a9w_A 238 VPPVLDARARGV-LAAVPPPARFSP--TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDL--V-TPQGQVEVDGSGLRA 311 (357)
T ss_dssp CHHHHHHHHTTC-CCEECCCSEEET--TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTC--B-CTTSCBCBCTTSCBB
T ss_pred ChhHHHHHhcCc-eEEecCcceEeC--CeeEECCCCEecCCEEEECCCcCCCCcccCcccc--c-CCCCCccccCCcccC
Confidence 3344 445555555543 3788999999999999999999999999887766 4 77899999999 66
Q ss_pred ecCCCCeEEec--ccCCCCccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 264 VRGFKNVFAIG--DITDIPEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 264 ~~~~~~ifa~G--D~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
+ +.|||||+| ||+. +.+++...|.+||+.+|+||.+.|.|
T Consensus 312 t-~~~~vya~Gd~d~~~-~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 312 L-AVPSVWLLGYGDWNG-MASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp S-SCTTEEECSSCGGGS-TTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred C-CCCCeEEeccccccc-cchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 6 899999999 5665 34457788999999999999999987
No 78
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.9e-31 Score=254.52 Aligned_cols=285 Identities=15% Similarity=0.171 Sum_probs=184.4
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-C-----CcEEEEcCCCceeeeccceeeeec--------------cccc--------
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-F-----ADVVLIDEKEYFEITWASLRAVVE--------------PSFA-------- 66 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g-----~~v~lie~~~~~~~~~~~~~~~~~--------------~~~~-------- 66 (368)
..+||+||||||+|+++|..|++ | .+|+|||+++.+++....+..... +...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 45699999999999999999974 7 999999999987744322210000 0000
Q ss_pred ----------------c-ccee----ecccccCceeEEE-eEEEEeecc---------EEEecCCe----EEEecEEEEe
Q 017664 67 ----------------V-RSVI----NHGDYLSNVKIVV-STAVSITDT---------EVVTAGGQ----TFVYDYVVVA 111 (368)
Q Consensus 67 ----------------~-~~~~----~~~~~~~~~~~~~-~~~~~~~~~---------~v~~~~g~----~~~~d~lvlA 111 (368)
. ..+. ...+.+ ++.+.. .++..++.. .+.+.++. .+.||+||+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVS 187 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEEC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEEC
Confidence 0 0000 000011 234433 345555432 45555654 7999999999
Q ss_pred cCCCCCCCCc-h---H--HHHHHHHHH--HHHH----hcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc
Q 017664 112 TGHVESVPKS-R---T--ERLSQYEKD--FEKV----KSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179 (368)
Q Consensus 112 tG~~~~~p~~-~---~--~~~~~~~~~--~~~~----~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~ 179 (368)
||+.|.+|+. . . ..++..... ...+ ..+++|+|||+|.+|+|+|..|.+.+++.+|++++|.+.+++.
T Consensus 188 tG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~ 267 (463)
T 3s5w_A 188 PGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA 267 (463)
T ss_dssp CCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC
T ss_pred CCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc
Confidence 9999888872 1 1 111111111 1112 1588999999999999999999987778999999999876542
Q ss_pred c--------------------CchhHHHHHHHHHc--------------------------CCcEEEecceeeecccCCC
Q 017664 180 V--------------------GSRASQIALDWLTS--------------------------KKVEVILNQSVTLNTISDG 213 (368)
Q Consensus 180 ~--------------------~~~~~~~~~~~l~~--------------------------~gv~i~~~~~v~~i~~~~~ 213 (368)
. +++....+.+.+.. .||++++++.|++++.+++
T Consensus 268 ~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~ 347 (463)
T 3s5w_A 268 DDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQ 347 (463)
T ss_dssp CCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETT
T ss_pred cCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCC
Confidence 1 11111222222222 6999999999998887655
Q ss_pred --eEEcC---CCc--EEecCEEEEccCCCCC--chhhhccccccccCCCCcEEeCCCeeecC----CCCeEEecccCCC-
Q 017664 214 --LIETS---SGE--TIDTDCHFMCTGKAMA--SSWLRETILKDSLDGRGRLMVDENLRVRG----FKNVFAIGDITDI- 279 (368)
Q Consensus 214 --~v~~~---~g~--~i~~d~vi~a~G~~p~--~~~~~~~~l~~~~~~~g~i~vd~~~~~~~----~~~ifa~GD~~~~- 279 (368)
.+.+. +|+ ++++|.||+|||++|+ .+++..... .. |++.||+++|+.. .|+||++|||...
T Consensus 348 ~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~--~~---g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~~ 422 (463)
T 3s5w_A 348 GIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAE--YL---GDHEIGRDYRLQTDERCKVAIYAQGFSQASH 422 (463)
T ss_dssp EEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGG--GB---C--CCCTTSBCCBCTTBCSEEEESSCCHHHH
T ss_pred EEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHH--Hh---CCcccCcccccccCCCCCCeEEEcCCCcccC
Confidence 45554 665 4999999999999998 666655432 12 7899999999854 4569999999752
Q ss_pred --CccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 280 --PEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 280 --~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
..+.....|++++++++..+.+...+
T Consensus 423 g~~~~~l~~~a~r~~~i~~~~~~~~~~~ 450 (463)
T 3s5w_A 423 GLSDTLLSVLPVRAEEISGSLYQHLKPG 450 (463)
T ss_dssp CTTTTSSTTHHHHHHHHHHHHHHHHC--
T ss_pred CcCccchhHHHHHHHHHHHHHHhhcCCc
Confidence 23456778999999887766655333
No 79
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=5.7e-32 Score=256.37 Aligned_cols=277 Identities=14% Similarity=0.088 Sum_probs=186.6
Q ss_pred CCCcEEEECCChHHHHHHHHhhc--------CCcEEEEcCCCceeeeccceeeeecccc--cccceeeccccc--CceeE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS--------FADVVLIDEKEYFEITWASLRAVVEPSF--AVRSVINHGDYL--SNVKI 82 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~--------g~~v~lie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~ 82 (368)
+++||+||||||||+++|..|++ +.+|+|||+++.++..+. ....+.. .........+++ .++++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~---~gv~p~~~~~~~~~~~~~~~~~~~~v~~ 78 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR---SGVAPDHPKIKSISKQFEKTAEDPRFRF 78 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH---HTSCTTCTGGGGGHHHHHHHHTSTTEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc---cccCCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 46799999999999999998865 899999999977653321 1111111 011111111221 25666
Q ss_pred EEeEEEEeeccEEEecCCeEEEecEEEEecCCC-CC---CCCchHHHHHHHHHHHH----------HH--hcCCeEEEEc
Q 017664 83 VVSTAVSITDTEVVTAGGQTFVYDYVVVATGHV-ES---VPKSRTERLSQYEKDFE----------KV--KSANSVLIVG 146 (368)
Q Consensus 83 ~~~~~~~~~~~~v~~~~g~~~~~d~lvlAtG~~-~~---~p~~~~~~~~~~~~~~~----------~~--~~~~~v~VvG 146 (368)
+... .++ +.+.+.++ .+.||+||+|||+. |. +|+.+...+.+...... .. ..+++++|||
T Consensus 79 ~~~v--~v~-~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG 154 (456)
T 1lqt_A 79 FGNV--VVG-EHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIG 154 (456)
T ss_dssp EESC--CBT-TTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEEC
T ss_pred EeeE--EEC-CEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEEC
Confidence 5442 232 33444444 47899999999997 44 44433222222222211 11 1478999999
Q ss_pred CchhHHHHHHHHhhh-------------------CCCCeEEEEecCcccccccC-------------------chh----
Q 017664 147 GGPTGVELAGEIAVD-------------------FPDKKVILVHRGPKLLEFVG-------------------SRA---- 184 (368)
Q Consensus 147 ~g~~~~e~a~~l~~~-------------------~~~~~v~~i~~~~~~l~~~~-------------------~~~---- 184 (368)
+|++|+|+|..|.+. ....+|+++.|+..+...+. +++
T Consensus 155 ~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~ 234 (456)
T 1lqt_A 155 NGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGIT 234 (456)
T ss_dssp CSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCC
T ss_pred CCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccch
Confidence 999999999998852 12359999999876533221 111
Q ss_pred --------------HHHHHHHHHc------CCcEEEecceeeecccCCC--eEEcC----------------CC--cEEe
Q 017664 185 --------------SQIALDWLTS------KKVEVILNQSVTLNTISDG--LIETS----------------SG--ETID 224 (368)
Q Consensus 185 --------------~~~~~~~l~~------~gv~i~~~~~v~~i~~~~~--~v~~~----------------~g--~~i~ 224 (368)
.+.+.+.+++ +||++++++.+.++..++. .+++. +| ++++
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~ 314 (456)
T 1lqt_A 235 DEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELP 314 (456)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEE
T ss_pred hhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEE
Confidence 2344555556 7999999999998876533 34443 34 4699
Q ss_pred cCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHc
Q 017664 225 TDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 225 ~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
+|.||+++|++|+. + .++ .++++|++.+|+++|+++.|+|||+|||+..|.. ....|..+|+.+|.+|...+.
T Consensus 315 ~d~vi~a~G~~p~~-l---~gl--~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~-~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 315 AQLVVRSVGYRGVP-T---PGL--PFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTG-VIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp CSEEEECSCEECCC-C---TTS--CCBTTTTBCCEETTEETTCSSEEECTHHHHCSCS-CTTHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEccccccCC-C---CCC--cccCCCCeeECCCCcCCCCCCEEEEeccCCCCch-hHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987 2 233 5677899999999996689999999999865431 345799999999999999886
Q ss_pred C
Q 017664 305 G 305 (368)
Q Consensus 305 g 305 (368)
+
T Consensus 388 ~ 388 (456)
T 1lqt_A 388 N 388 (456)
T ss_dssp H
T ss_pred h
Confidence 5
No 80
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.5e-31 Score=276.09 Aligned_cols=272 Identities=16% Similarity=0.193 Sum_probs=186.6
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CC-cEEEEcCCCceeeeccceeeeecccc--cccceeeccccc--CceeEEEeEEE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FA-DVVLIDEKEYFEITWASLRAVVEPSF--AVRSVINHGDYL--SNVKIVVSTAV 88 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~-~v~lie~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~ 88 (368)
..+||+||||||||++||.+|++ |+ +|+|||+++.+|+.+. ..+ +.+ .........+++ .+++++.+..+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~---~~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST---SEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH---HTS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc---ccC-CcccCCHHHHHHHHHHHHHCCcEEEcccEe
Confidence 46799999999999999999984 88 7999999987764321 000 111 111111111111 25666665444
Q ss_pred EeeccEEEecCCeEEEecEEEEecCCC-CCCCC----ch-HHHHHHHHHHHHH----------------HhcCCeEEEEc
Q 017664 89 SITDTEVVTAGGQTFVYDYVVVATGHV-ESVPK----SR-TERLSQYEKDFEK----------------VKSANSVLIVG 146 (368)
Q Consensus 89 ~~~~~~v~~~~g~~~~~d~lvlAtG~~-~~~p~----~~-~~~~~~~~~~~~~----------------~~~~~~v~VvG 146 (368)
. .+.+.+.++..+.||+||||||+. |..++ .+ ...+.+...++.. ...+++|+|||
T Consensus 262 ~--~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIG 339 (1025)
T 1gte_A 262 S--ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLG 339 (1025)
T ss_dssp S--TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEEC
T ss_pred c--cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEEC
Confidence 2 123444444557899999999994 65432 22 1122222211111 11357999999
Q ss_pred CchhHHHHHHHHhhhCCC-CeEEEEecCcc-cccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEc----
Q 017664 147 GGPTGVELAGEIAVDFPD-KKVILVHRGPK-LLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIET---- 217 (368)
Q Consensus 147 ~g~~~~e~a~~l~~~~~~-~~v~~i~~~~~-~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~---- 217 (368)
+|++|+|+|..+.+ .+ .+|+++++.++ .++..+++ .+.+++.||++++++.+.++..+++ .+++
T Consensus 340 gG~~g~e~A~~~~~--~G~~~Vtvv~r~~~~~~~~~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~ 412 (1025)
T 1gte_A 340 AGDTAFDCATSALR--CGARRVFLVFRKGFVNIRAVPEE-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE 412 (1025)
T ss_dssp SSHHHHHHHHHHHH--TTCSEEEEECSSCGGGCCSCHHH-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEE
T ss_pred CChHHHHHHHHHHH--cCCCEEEEEEecChhhCCCCHHH-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeE
Confidence 99999999999885 35 48999999873 44443332 2567788999999999888865444 2332
Q ss_pred --CCC---------cEEecCEEEEccCCCCC-chhhhc-cccccccCCCCcEEeCC-CeeecCCCCeEEecccCCCCccc
Q 017664 218 --SSG---------ETIDTDCHFMCTGKAMA-SSWLRE-TILKDSLDGRGRLMVDE-NLRVRGFKNVFAIGDITDIPEIK 283 (368)
Q Consensus 218 --~~g---------~~i~~d~vi~a~G~~p~-~~~~~~-~~l~~~~~~~g~i~vd~-~~~~~~~~~ifa~GD~~~~~~~~ 283 (368)
++| +++++|.||+|+|++|+ ..++.. .++ .++++|+|.||+ ++|| +.|+|||+|||+..+.
T Consensus 413 ~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl--~~~~~G~I~vd~~~~~T-s~~~VfA~GD~~~~~~-- 487 (1025)
T 1gte_A 413 QDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPI--KFNRWDLPEVDPETMQT-SEPWVFAGGDIVGMAN-- 487 (1025)
T ss_dssp ECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTS--CBCTTSSBCCCTTTCBC-SSTTEEECSGGGCSCC--
T ss_pred EcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCc--eECCCCCEEECCCCCcc-CCCCEEEeCCCCCCch--
Confidence 122 37899999999999764 555554 244 678889999997 8998 8999999999997644
Q ss_pred hHHHHHHHHHHHHHHHHHHHc
Q 017664 284 QGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 284 ~~~~a~~~g~~aa~~i~~~l~ 304 (368)
+...|+.||+.||++|.++|.
T Consensus 488 ~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 488 TTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999998875
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.97 E-value=3.5e-31 Score=251.25 Aligned_cols=278 Identities=16% Similarity=0.127 Sum_probs=182.9
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-C--CcEEEEcCCCceeeeccceeeeeccccc--ccceeeccccc--CceeEEEeEE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-F--ADVVLIDEKEYFEITWASLRAVVEPSFA--VRSVINHGDYL--SNVKIVVSTA 87 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g--~~v~lie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~ 87 (368)
.++||+||||||||+++|..|++ + .+|+|||+++..+..+. ....+.+. ........+++ .+++++....
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~---~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR---FGVAPDHPEVKNVINTFTQTARSDRCAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH---HTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee---cccCCCCccHHHHHHHHHHHHHhCCcEEEeeeE
Confidence 45799999999999999999974 6 99999999987653321 11111111 11111111222 1455544322
Q ss_pred EEeeccEEEecCCeEEEecEEEEecCCCC-C---CCCchHHHHHHHHHHHHH------------HhcCCeEEEEcCchhH
Q 017664 88 VSITDTEVVTAGGQTFVYDYVVVATGHVE-S---VPKSRTERLSQYEKDFEK------------VKSANSVLIVGGGPTG 151 (368)
Q Consensus 88 ~~~~~~~v~~~~g~~~~~d~lvlAtG~~~-~---~p~~~~~~~~~~~~~~~~------------~~~~~~v~VvG~g~~~ 151 (368)
+ . +.+.+.+ ..+.||+||+|||+.| . +|+.+...+.++..+... ...+++++|||+|++|
T Consensus 82 v--~-~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g 157 (460)
T 1cjc_A 82 V--G-RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVA 157 (460)
T ss_dssp B--T-TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHH
T ss_pred E--e-eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHH
Confidence 1 1 2333333 2468999999999983 4 444332222222222111 1147899999999999
Q ss_pred HHHHHHHhh-------------------hCCCCeEEEEecCccc--------------ccccC-----c-----------
Q 017664 152 VELAGEIAV-------------------DFPDKKVILVHRGPKL--------------LEFVG-----S----------- 182 (368)
Q Consensus 152 ~e~a~~l~~-------------------~~~~~~v~~i~~~~~~--------------l~~~~-----~----------- 182 (368)
+|+|..|.+ +....+|+++.|++.. ++..+ .
T Consensus 158 ~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~ 237 (460)
T 1cjc_A 158 LDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKE 237 (460)
T ss_dssp HHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTT
T ss_pred HHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhh
Confidence 999999883 2223479999988754 22110 0
Q ss_pred --h----hHHHHHHHHHc--------------CCcEEEecceeeecccC--C-C--eEEcC---------------CC--
Q 017664 183 --R----ASQIALDWLTS--------------KKVEVILNQSVTLNTIS--D-G--LIETS---------------SG-- 220 (368)
Q Consensus 183 --~----~~~~~~~~l~~--------------~gv~i~~~~~v~~i~~~--~-~--~v~~~---------------~g-- 220 (368)
. +.+.+.+.+++ +||++++++.+.++..+ + . .+++. +|
T Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~ 317 (460)
T 1cjc_A 238 AARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDV 317 (460)
T ss_dssp SCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCce
Confidence 1 22334455555 89999999999888765 3 2 23332 34
Q ss_pred cEEecCEEEEccCCCCCchhhhcccccc-ccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHH
Q 017664 221 ETIDTDCHFMCTGKAMASSWLRETILKD-SLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNL 299 (368)
Q Consensus 221 ~~i~~d~vi~a~G~~p~~~~~~~~~l~~-~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i 299 (368)
+++++|.||+++|++|+. + . ++ +++++|++.+|+++|+.+.|+|||+|||+..|. .....|+.+|+.+|.+|
T Consensus 318 ~~i~~d~Vi~a~G~~p~~-l---~--gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~-~~i~~a~~~g~~aa~~i 390 (460)
T 1cjc_A 318 EDLPCGLVLSSIGYKSRP-I---D--PSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT-GVITTTMTDSFLTGQIL 390 (460)
T ss_dssp EEEECSEEEECCCEECCC-C---C--TTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT-CCHHHHHHHHHHHHHHH
T ss_pred EEEEcCEEEECCCCCCCC-C---C--CCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC-ccHHHHHHHHHHHHHHH
Confidence 589999999999999986 3 2 33 467788999999999943799999999996543 13568999999999999
Q ss_pred HHHHcCC
Q 017664 300 KKLMMGR 306 (368)
Q Consensus 300 ~~~l~g~ 306 (368)
...+.+.
T Consensus 391 ~~~l~~~ 397 (460)
T 1cjc_A 391 LQDLKAG 397 (460)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9988654
No 82
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=9.1e-32 Score=267.96 Aligned_cols=270 Identities=16% Similarity=0.113 Sum_probs=188.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccc---cCceeEEEeEE
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDY---LSNVKIVVSTA 87 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 87 (368)
+..+++||+|||||+|||+||+.|+ +|++|+|||+++.+++.+...................... +.++++....
T Consensus 387 ~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~- 465 (690)
T 3k30_A 387 AKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRES- 465 (690)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSC-
T ss_pred cccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECC-
Confidence 3445789999999999999999998 4999999999988775533211111100000101111111 1134433321
Q ss_pred EEeeccEEEecCCeEEEecEEEEecCCCC--------CCC---CchHHHHHHHHHHHH-HHhcCCeEEEEc--CchhHHH
Q 017664 88 VSITDTEVVTAGGQTFVYDYVVVATGHVE--------SVP---KSRTERLSQYEKDFE-KVKSANSVLIVG--GGPTGVE 153 (368)
Q Consensus 88 ~~~~~~~v~~~~g~~~~~d~lvlAtG~~~--------~~p---~~~~~~~~~~~~~~~-~~~~~~~v~VvG--~g~~~~e 153 (368)
.+...++..+.||+||+|||+.| ..| +.+...+.+...... ....+++++||| +|.+|+|
T Consensus 466 ------~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e 539 (690)
T 3k30_A 466 ------PMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGV 539 (690)
T ss_dssp ------CCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHH
T ss_pred ------eecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHH
Confidence 22233445678999999999983 233 333222222222222 234578899999 9999999
Q ss_pred HHHHHhhhCCCCeEEEEecCcccccccC-chhHHHHHHHHHcCCcEEEecceeeecccCCCeEE---cCCCcEEecCEEE
Q 017664 154 LAGEIAVDFPDKKVILVHRGPKLLEFVG-SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIE---TSSGETIDTDCHF 229 (368)
Q Consensus 154 ~a~~l~~~~~~~~v~~i~~~~~~l~~~~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~---~~~g~~i~~d~vi 229 (368)
+|..|.+ .+.+|+++++.+.+++... +.....+.+.+++.||++++++.|++++.++..+. +.+++++++|.||
T Consensus 540 ~A~~L~~--~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV 617 (690)
T 3k30_A 540 VAELLAQ--KGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVV 617 (690)
T ss_dssp HHHHHHH--TTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEE
T ss_pred HHHHHHh--CCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEE
Confidence 9999986 4889999999988776543 56678889999999999999999998876543443 3356689999999
Q ss_pred EccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCC
Q 017664 230 MCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRN 307 (368)
Q Consensus 230 ~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~ 307 (368)
+|+|++|+.+++..... .+. ++ +.|+||++|||++.+ ....|.+||+.||.||.+.|.+++
T Consensus 618 ~A~G~~p~~~l~~~l~~------~~~-------~t-~~~~VyaiGD~~~~~---~~~~A~~~g~~aa~~i~~~l~g~~ 678 (690)
T 3k30_A 618 MVTARLPREELYLDLVA------RRD-------AG-EIASVRGIGDAWAPG---TIAAAVWSGRRAAEEFDAVLPSND 678 (690)
T ss_dssp EESCEEECCHHHHHHHH------HHH-------HT-SCSEEEECGGGTSCB---CHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred ECCCCCCChHHHHHHhh------hhc-------cc-CCCCEEEEeCCCchh---hHHHHHHHHHHHHHHHHhhccCCC
Confidence 99999999887765332 111 44 799999999999754 456799999999999998877764
No 83
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=1.6e-29 Score=240.65 Aligned_cols=260 Identities=14% Similarity=0.150 Sum_probs=176.0
Q ss_pred CcEEEECCChHHHHHHHHhh----cCCc---EEEEcCCCceeeeccceee------------e----ec----------c
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ----SFAD---VVLIDEKEYFEITWASLRA------------V----VE----------P 63 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~----~g~~---v~lie~~~~~~~~~~~~~~------------~----~~----------~ 63 (368)
+||+||||||||+++|..|+ .|.+ |+|||+++.+|+.|..... . .. .
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 69999999999999999885 4889 9999999887765532100 0 00 0
Q ss_pred ccc--c------cceeecc-------cccC--cee--EE-EeEEEEee--cc----EEEecC---C--eEEEecEEEEec
Q 017664 64 SFA--V------RSVINHG-------DYLS--NVK--IV-VSTAVSIT--DT----EVVTAG---G--QTFVYDYVVVAT 112 (368)
Q Consensus 64 ~~~--~------~~~~~~~-------~~~~--~~~--~~-~~~~~~~~--~~----~v~~~~---g--~~~~~d~lvlAt 112 (368)
.+. . ..+.... ++.. +++ +. +..+..++ .. .|.+.+ + .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 000 0 0000000 0000 232 32 34555554 22 555544 4 578999999999
Q ss_pred C--CCCCCCCchHHH------HHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchh
Q 017664 113 G--HVESVPKSRTER------LSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRA 184 (368)
Q Consensus 113 G--~~~~~p~~~~~~------~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~ 184 (368)
| +.|.+|.+++.. ++...........+++|+|||+|++|+|+|..|.+ .+.+|+++++++.+++...
T Consensus 163 G~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~--~g~~V~li~~~~~~~~~~~--- 237 (464)
T 2xve_A 163 GHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYK--YGAKKLISCYRTAPMGYKW--- 237 (464)
T ss_dssp CSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHH--TTCSEEEEECSSCCCCCCC---
T ss_pred CCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHH--hCCeEEEEEECCCCCCCCC---
Confidence 9 667666543211 11111111122358999999999999999999996 4889999999887654321
Q ss_pred HHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCC---C
Q 017664 185 SQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDE---N 261 (368)
Q Consensus 185 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~---~ 261 (368)
..||+++ ..|.+++ ++.+.+.||+++++|.||+|||++|+.+++... +++..+.++++ ++. .
T Consensus 238 ---------~~~V~~~--~~V~~i~--~~~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~-~gl~~~~~~~v-~~~~~~~ 302 (464)
T 2xve_A 238 ---------PENWDER--PNLVRVD--TENAYFADGSSEKVDAIILCTGYIHHFPFLNDD-LRLVTNNRLWP-LNLYKGV 302 (464)
T ss_dssp ---------CTTEEEC--SCEEEEC--SSEEEETTSCEEECSEEEECCCBCCCCTTBCTT-TCCCCCSSSCC-SSEETTT
T ss_pred ---------CCceEEc--CCeEEEe--CCEEEECCCCEEeCCEEEECCCCCCCCCCcCcc-cccccCCCccc-ccccceE
Confidence 2588887 6777765 337889999999999999999999999988752 23355555565 342 2
Q ss_pred eeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHH
Q 017664 262 LRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 262 ~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~ 300 (368)
+++ +.|+||++|||+..+ ....|..||+.+|++|.
T Consensus 303 ~~t-~~p~i~aiGd~~~~~---~~~~a~~qa~~~a~~l~ 337 (464)
T 2xve_A 303 VWE-DNPKFFYIGMQDQWY---SFNMFDAQAWYARDVIM 337 (464)
T ss_dssp EES-SSTTEEECSCSCCSS---CHHHHHHHHHHHHHHHT
T ss_pred ecC-CCCCEEEEeCccccc---chHHHHHHHHHHHHHHc
Confidence 555 799999999998643 56889999999999997
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=3.5e-31 Score=264.77 Aligned_cols=272 Identities=18% Similarity=0.141 Sum_probs=181.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccC-ceeEE---EeEE
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLS-NVKIV---VSTA 87 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~ 87 (368)
..+++||+|||||||||+||..|+ +|++|+|||+++.+++.+...... +.+. .+....+++. .++.. ...+
T Consensus 386 ~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~--pg~~--~~~~~~~~~~~~i~~~~~~~~~~ 461 (729)
T 1o94_A 386 TKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAAL--PGLG--EWSYHRDYRETQITKLLKKNKES 461 (729)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTS--TTCG--GGHHHHHHHHHHHHHHHHHSTTC
T ss_pred ccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccC--CChH--HHHHHHHHHHHHHHHhhcccCCc
Confidence 345689999999999999999998 599999999998876443221100 0000 0000000000 00000 0001
Q ss_pred EEee-ccEEEecCCeEEEecEEEEecCCC--------CCCC---Cch--HHHHHHHHHHHH-HHhcCCeEEEEc--Cchh
Q 017664 88 VSIT-DTEVVTAGGQTFVYDYVVVATGHV--------ESVP---KSR--TERLSQYEKDFE-KVKSANSVLIVG--GGPT 150 (368)
Q Consensus 88 ~~~~-~~~v~~~~g~~~~~d~lvlAtG~~--------~~~p---~~~--~~~~~~~~~~~~-~~~~~~~v~VvG--~g~~ 150 (368)
+.+. ...+.+.++..+.||+||+|||+. |..| +.+ ...+.+...... ....+++|+||| +|++
T Consensus 462 v~i~~~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~ 541 (729)
T 1o94_A 462 QLALGQKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFM 541 (729)
T ss_dssp EEECSCCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSH
T ss_pred eEEEeCeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCch
Confidence 1222 123444445568899999999997 3333 332 222323333222 223478999999 9999
Q ss_pred HHHHHHHHhhhCCCCeEEEEecCcccccc--cCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEE--cCCC-cE---
Q 017664 151 GVELAGEIAVDFPDKKVILVHRGPKLLEF--VGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIE--TSSG-ET--- 222 (368)
Q Consensus 151 ~~e~a~~l~~~~~~~~v~~i~~~~~~l~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~--~~~g-~~--- 222 (368)
|+|+|..|.+ .+.+|+++++.+ +++. ++.. ...+.+.++++||++++++.+.++..++..+. ..++ ++
T Consensus 542 g~e~A~~l~~--~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~ 617 (729)
T 1o94_A 542 APSLAEKLAT--AGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYR 617 (729)
T ss_dssp HHHHHHHHHH--TTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCC
T ss_pred HHHHHHHHHH--cCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecc
Confidence 9999999986 478999999988 6542 3333 56778889999999999999998875422332 1232 22
Q ss_pred ---------------EecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHHH
Q 017664 223 ---------------IDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYL 287 (368)
Q Consensus 223 ---------------i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~ 287 (368)
+++|.||+|+|++|+.+++..... .+|+++|| +.|+|||+|||+.. .++..
T Consensus 618 ~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~l~~----------~vd~~~~t-~~~~VyAiGD~~~~---~~~~~ 683 (729)
T 1o94_A 618 GPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNELKA----------RESEWAEN-DIKGIYLIGDAEAP---RLIAD 683 (729)
T ss_dssp CTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHHHHH----------TGGGTGGG-TCCEEEECGGGTSC---CCHHH
T ss_pred cccccccccCCcceeeeCCEEEECCCCCCChHHHHHHhh----------hccccccc-CCCCeEEEeCccch---hhHHH
Confidence 999999999999999887754321 26788887 89999999999963 35778
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 017664 288 AQKHALVTAKNLKKLMMGR 306 (368)
Q Consensus 288 a~~~g~~aa~~i~~~l~g~ 306 (368)
|++||+.||.+|.+.+.+.
T Consensus 684 A~~~G~~aA~~i~~~l~~~ 702 (729)
T 1o94_A 684 ATFTGHRVAREIEEANPQI 702 (729)
T ss_dssp HHHHHHHHHHTTTSSCTTS
T ss_pred HHHHHHHHHHHhhhhcccC
Confidence 9999999999998766543
No 85
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=9.3e-30 Score=261.05 Aligned_cols=269 Identities=16% Similarity=0.105 Sum_probs=184.9
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce-eeeecccccccceeecc-c--ccCceeEEEe-EEE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL-RAVVEPSFAVRSVINHG-D--YLSNVKIVVS-TAV 88 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~-~~~ 88 (368)
..+||+||||||||++||.+|+ .|++|+|||+++.+++.+... ...+......+...... + -+.+++++.. .+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~ 206 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVF 206 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 3579999999999999999997 599999999998877544311 01111100000000000 0 0124555433 344
Q ss_pred Eeecc-E------------EEe------cCCeEEEecEEEEecCCCCCCCCc---hHHHHHH---HHHHHHH--HhcCCe
Q 017664 89 SITDT-E------------VVT------AGGQTFVYDYVVVATGHVESVPKS---RTERLSQ---YEKDFEK--VKSANS 141 (368)
Q Consensus 89 ~~~~~-~------------v~~------~~g~~~~~d~lvlAtG~~~~~p~~---~~~~~~~---~~~~~~~--~~~~~~ 141 (368)
.++.. . +.+ .++..+.||+||||||+.|..|++ +.+.+.. +...... ...+++
T Consensus 207 ~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~ 286 (965)
T 2gag_A 207 GSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGAR 286 (965)
T ss_dssp EEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSS
T ss_pred eeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCe
Confidence 44322 1 111 122468999999999998655443 2222222 2222221 123589
Q ss_pred EEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeeccc--CCC--eEEc
Q 017664 142 VLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTI--SDG--LIET 217 (368)
Q Consensus 142 v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~--~~~--~v~~ 217 (368)
++|||+|++|+|+|..|.+ .+.+|+++++.+.+++. .+.+++.||++++++.+.+++. ++. .+++
T Consensus 287 vvViGgG~~g~E~A~~L~~--~G~~Vtvv~~~~~~~~~---------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~ 355 (965)
T 2gag_A 287 IAVATTNDSAYELVRELAA--TGGVVAVIDARSSISAA---------AAQAVADGVQVISGSVVVDTEADENGELSAIVV 355 (965)
T ss_dssp EEEEESSTTHHHHHHHHGG--GTCCSEEEESCSSCCHH---------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEE
T ss_pred EEEEcCCHHHHHHHHHHHH--cCCcEEEEECCCccchh---------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEE
Confidence 9999999999999999985 37779999998876421 5678899999999999999886 333 4554
Q ss_pred CC-------C--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeee----cCCCCeEEecccCCCCccch
Q 017664 218 SS-------G--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRV----RGFKNVFAIGDITDIPEIKQ 284 (368)
Q Consensus 218 ~~-------g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~----~~~~~ifa~GD~~~~~~~~~ 284 (368)
.+ | +++++|.|++++|++|+.+++... ++++.+|++++. ++.|+|||+|||++.+. .
T Consensus 356 ~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~--------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~--l 425 (965)
T 2gag_A 356 AELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQR--------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLD--T 425 (965)
T ss_dssp EEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHT--------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCS--H
T ss_pred EeccccCCCCceEEEEcCEEEECCCcCcChHHHHhC--------CCcEEEcCcccccccCCCCCCEEEEEecCCchh--H
Confidence 43 5 689999999999999998876533 467888887762 48999999999998754 3
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 017664 285 GYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 285 ~~~a~~~g~~aa~~i~~~l~g 305 (368)
..|..||+.||.+|...+..
T Consensus 426 -~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 426 -ASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp -HHHHHHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHHHHcCC
Confidence 48999999999999988753
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.96 E-value=2e-29 Score=239.41 Aligned_cols=263 Identities=17% Similarity=0.211 Sum_probs=174.6
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CC--cEEEEcCCCceeeeccceeee---------------------------ecc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FA--DVVLIDEKEYFEITWASLRAV---------------------------VEP 63 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~--~v~lie~~~~~~~~~~~~~~~---------------------------~~~ 63 (368)
++.+||+||||||+|+++|..|++ |. +|+|||+++.++..|...... ...
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 456899999999999999999985 88 999999998766544221100 000
Q ss_pred ccc-------cc--------------------ceee-cccccC--ceeE-EEeEEEEeec--c--EEEecC---Ce---E
Q 017664 64 SFA-------VR--------------------SVIN-HGDYLS--NVKI-VVSTAVSITD--T--EVVTAG---GQ---T 102 (368)
Q Consensus 64 ~~~-------~~--------------------~~~~-~~~~~~--~~~~-~~~~~~~~~~--~--~v~~~~---g~---~ 102 (368)
.+. .. .+.. ..++.. +..+ .+.++..++. . .|.+.+ |. .
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 000 00 0000 000000 1122 2345555543 2 455544 55 7
Q ss_pred EEecEEEEecCC--CCCCCCchHHH-H--------HHHHHHH-HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCe-EEE
Q 017664 103 FVYDYVVVATGH--VESVPKSRTER-L--------SQYEKDF-EKVKSANSVLIVGGGPTGVELAGEIAVDFPDKK-VIL 169 (368)
Q Consensus 103 ~~~d~lvlAtG~--~~~~p~~~~~~-~--------~~~~~~~-~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~-v~~ 169 (368)
+.||+||+|||. .|.+|.+++.. . .+..... .....+++|+|||+|++|+|+|..|.+ .+.+ |++
T Consensus 164 ~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~--~~~~~V~l 241 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTP--VAKHPIYQ 241 (447)
T ss_dssp EEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTT--TSCSSEEE
T ss_pred EEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHH--HhCCcEEE
Confidence 999999999999 57666654321 1 1111111 112358999999999999999999985 4677 999
Q ss_pred EecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcE-EecCEEEEccCCCCCchh-----hhc
Q 017664 170 VHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGET-IDTDCHFMCTGKAMASSW-----LRE 243 (368)
Q Consensus 170 i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~-i~~d~vi~a~G~~p~~~~-----~~~ 243 (368)
+++++.+ +++.||.+ ...|+++..+++.|.+.||++ +++|.||+|||++|+.++ +..
T Consensus 242 ~~r~~~~---------------l~~~~i~~--~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~ 304 (447)
T 2gv8_A 242 SLLGGGD---------------IQNESLQQ--VPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKS 304 (447)
T ss_dssp ECTTCCS---------------CBCSSEEE--ECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCS
T ss_pred EeCCCCc---------------CCCCCeEE--ecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCccccccc
Confidence 9988754 44567774 567787765555889999976 789999999999999988 554
Q ss_pred cccccccCCCCcEEeCCCeee--cCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHH
Q 017664 244 TILKDSLDGRGRLMVDENLRV--RGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLK 300 (368)
Q Consensus 244 ~~l~~~~~~~g~i~vd~~~~~--~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~ 300 (368)
....+ ..++.+.++.+.++ ++.|++|++||+.... ....|..||+.+|++|.
T Consensus 305 ~~~~i--~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~---~~~~a~~qa~~~a~~~~ 358 (447)
T 2gv8_A 305 PETKL--IDDGSHVHNVYQHIFYIPDPTLAFVGLALHVV---PFPTSQAQAAFLARVWS 358 (447)
T ss_dssp TTTCC--CSSSSSCCSEETTTEETTCTTEEESSCCBSSC---HHHHHHHHHHHHHHHHT
T ss_pred ccCce--ecCCCcccccccccccCCCCcEEEEecccccc---CchHHHHHHHHHHHHHc
Confidence 32222 22444555544331 4799999999998653 57889999999999997
No 87
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=2.3e-29 Score=241.39 Aligned_cols=247 Identities=17% Similarity=0.131 Sum_probs=175.6
Q ss_pred CCcEEEECCChHHHHHHHHhhcCCcEEEEcCCCceeeeccceeeee-c-ccccccceeecc-cccCceeEE-EeEEEEee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEYFEITWASLRAVV-E-PSFAVRSVINHG-DYLSNVKIV-VSTAVSIT 91 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~ 91 (368)
++||+|||||++|+++|.+|++.++|+|||+++.+++.+....... . +....+...... ++..++++. ...+..++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i~ 187 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGVF 187 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCCE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 4699999999999999999973399999999998876543321111 0 000001111111 112245543 33455554
Q ss_pred cc--E--EEe-cCCe--EEEecEEEEecCCCCCCCCch---HHHHH---HHHHHHHH--HhcCCeEEEEcCchhHHHHHH
Q 017664 92 DT--E--VVT-AGGQ--TFVYDYVVVATGHVESVPKSR---TERLS---QYEKDFEK--VKSANSVLIVGGGPTGVELAG 156 (368)
Q Consensus 92 ~~--~--v~~-~~g~--~~~~d~lvlAtG~~~~~p~~~---~~~~~---~~~~~~~~--~~~~~~v~VvG~g~~~~e~a~ 156 (368)
.. . +.. .+++ .+.||+||+|||+.|..|+++ ...+. .+....+. ...+++++|+|+|++++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--- 264 (493)
T 1y56_A 188 DKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--- 264 (493)
T ss_dssp ECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH---
T ss_pred cCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH---
Confidence 32 1 221 3453 689999999999986555433 22222 22222221 123589999999999987
Q ss_pred HHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCC
Q 017664 157 EIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 157 ~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~ 234 (368)
+.+++.||++++++.|.+++.++. .+.+.+|+++++|.||+++|.
T Consensus 265 ---------------------------------~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 265 ---------------------------------QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp ---------------------------------HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE
T ss_pred ---------------------------------HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc
Confidence 456778999999999999886654 577888999999999999999
Q ss_pred CCCchhhhccccccccCCCCcEE-eCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHH
Q 017664 235 AMASSWLRETILKDSLDGRGRLM-VDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLM 303 (368)
Q Consensus 235 ~p~~~~~~~~~l~~~~~~~g~i~-vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l 303 (368)
+|+.+++...++.+.++++|++. ||+++| +.|+||++|||++.+ ++..|..||+.||.||...+
T Consensus 312 ~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vya~GD~~~~~---~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 312 RPDINPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIYVAGSAVSIK---PHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EECCHHHHHTTCCEEEETTEEEECCCTTSE--EETTEEECSTTTCCC---CHHHHHHHHHHHHHHHHHHT
T ss_pred CcCchHHHhcCCCccccCCceeeccccccC--cCCCEEEEeccCCcc---CHHHHHHHHHHHHHHHHHHc
Confidence 99999998887755556788887 899999 589999999999764 57889999999999999876
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=1.1e-27 Score=231.27 Aligned_cols=286 Identities=18% Similarity=0.186 Sum_probs=182.2
Q ss_pred CCCcEEEECCChHHHHHHHHhh-c-CCcEEEEcCCCceeeeccce-----eeeec-----cccc---------ccceeec
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-S-FADVVLIDEKEYFEITWASL-----RAVVE-----PSFA---------VRSVINH 73 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~-g~~v~lie~~~~~~~~~~~~-----~~~~~-----~~~~---------~~~~~~~ 73 (368)
.++||+|||||++|+++|..|+ + |.+|+|+|+++.+|+.|... ..... ..+. ...+...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 4579999999999999999998 5 99999999998776544211 00000 0000 0000000
Q ss_pred cc---c----c--Cce--eEE-EeEEEEee--cc----EEEecCCeEEEecEEEEecCC--CCCCCCchHHH------HH
Q 017664 74 GD---Y----L--SNV--KIV-VSTAVSIT--DT----EVVTAGGQTFVYDYVVVATGH--VESVPKSRTER------LS 127 (368)
Q Consensus 74 ~~---~----~--~~~--~~~-~~~~~~~~--~~----~v~~~~g~~~~~d~lvlAtG~--~~~~p~~~~~~------~~ 127 (368)
.+ + . .++ .+. ..++..++ .+ .|.+.+|+.+.||+||+|||. .|..|++++.. ++
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 166 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIH 166 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCEEE
Confidence 00 0 0 022 222 23444443 33 678888888999999999994 56665543211 22
Q ss_pred HHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-cccccCchhHHHHHHHH--------------
Q 017664 128 QYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-LLEFVGSRASQIALDWL-------------- 192 (368)
Q Consensus 128 ~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-~l~~~~~~~~~~~~~~l-------------- 192 (368)
...........+++|+|||+|.+|+|+|..|.+ .+.+|++++|.+. ++|..++++...+++.+
T Consensus 167 ~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~--~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 244 (540)
T 3gwf_A 167 TAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAP--EVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNS 244 (540)
T ss_dssp GGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTT--TCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTS
T ss_pred eecCCCccccccceEEEECCCchHHHHHHHHHh--hCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhc
Confidence 222111222457999999999999999999985 4889999999987 44443333222221111
Q ss_pred --------------------------------------------------------------------------------
Q 017664 193 -------------------------------------------------------------------------------- 192 (368)
Q Consensus 193 -------------------------------------------------------------------------------- 192 (368)
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~ 324 (540)
T 3gwf_A 245 AVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKG 324 (540)
T ss_dssp SSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCS
T ss_pred cccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCC
Confidence
Q ss_pred ----------------HcCCcEEEe--cceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccc----ccc
Q 017664 193 ----------------TSKKVEVIL--NQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILK----DSL 250 (368)
Q Consensus 193 ----------------~~~gv~i~~--~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~----~~~ 250 (368)
.+.+|+++. ...|.++..+ ++++.||+++++|.||+|||+.++..++....+. ..+
T Consensus 325 ~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~--gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l 402 (540)
T 3gwf_A 325 LFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK--GVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHI 402 (540)
T ss_dssp CCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS--EEEETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBH
T ss_pred CCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC--eEEcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCH
Confidence 145888885 6778776543 7999999999999999999999876444432210 011
Q ss_pred CC--CCcEEeCCCeeecCCCCeEEe-cccCCCCccchHHHHHHHHHHHHHHHHHHHcCC
Q 017664 251 DG--RGRLMVDENLRVRGFKNVFAI-GDITDIPEIKQGYLAQKHALVTAKNLKKLMMGR 306 (368)
Q Consensus 251 ~~--~g~i~vd~~~~~~~~~~ifa~-GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~ 306 (368)
++ ++.+.....+.+.+.||+|++ |...... .....+..|++.+++.|.....++
T Consensus 403 ~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~--s~~~~~e~q~~~i~~~i~~~~~~~ 459 (540)
T 3gwf_A 403 NDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFT--NLPPSIETQVEWISDTIGYAERNG 459 (540)
T ss_dssp HHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCS--CHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhhccChhhccccccCCCCceEEEecCCCCCc--cHHHHHHHHHHHHHHHHHHHHHCC
Confidence 11 122333344677789999998 7765422 256788899999999887665443
No 89
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=7.1e-28 Score=239.34 Aligned_cols=254 Identities=19% Similarity=0.221 Sum_probs=173.3
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeecccccccceeeccccc--CceeEEEeEEEEe
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYL--SNVKIVVSTAVSI 90 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 90 (368)
.+++||+||||||||++||..|++ |++|+|||+++.+++.+.............+......+++ .+++++....+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 446899999999999999999984 9999999999888755432111111000000011111111 1455544432211
Q ss_pred eccEEEecCCeEE-EecEEEEecCCCCCCCCchH---HHHHHHHHHHH-HHhcCCeEEEEcCchhHHHHHHHHhhhC---
Q 017664 91 TDTEVVTAGGQTF-VYDYVVVATGHVESVPKSRT---ERLSQYEKDFE-KVKSANSVLIVGGGPTGVELAGEIAVDF--- 162 (368)
Q Consensus 91 ~~~~v~~~~g~~~-~~d~lvlAtG~~~~~p~~~~---~~~~~~~~~~~-~~~~~~~v~VvG~g~~~~e~a~~l~~~~--- 162 (368)
..+ .||+||+|||+.|..|++++ ..+.+...... ....+++++|||+|++|+|+|..|.+..
T Consensus 451 ----------~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~v 520 (671)
T 1ps9_A 451 ----------DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGEST 520 (671)
T ss_dssp ----------SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCG
T ss_pred ----------HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCc
Confidence 123 89999999999976665432 22222222222 1235789999999999999999987421
Q ss_pred --------------------------------CCCeEEEEecCccccc-ccCchhHHHHHHHHHcCCcEEEecceeeecc
Q 017664 163 --------------------------------PDKKVILVHRGPKLLE-FVGSRASQIALDWLTSKKVEVILNQSVTLNT 209 (368)
Q Consensus 163 --------------------------------~~~~v~~i~~~~~~l~-~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 209 (368)
...+|+++++.+..+. .+++.....+.+.++++||++++++.+.+++
T Consensus 521 tv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~ 600 (671)
T 1ps9_A 521 SQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID 600 (671)
T ss_dssp GGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE
T ss_pred ccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe
Confidence 0146778877665443 4566777788899999999999999999887
Q ss_pred cCCCeEEc-CCC--cEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccchHH
Q 017664 210 ISDGLIET-SSG--ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGY 286 (368)
Q Consensus 210 ~~~~~v~~-~~g--~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~ 286 (368)
.+ .+.+ .+| +++++|.||+++|++|+.+++.... . ..++||++|||+.... +.+.
T Consensus 601 ~~--~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~l~------------------~-~g~~v~aiGD~~~~~~-~~~~ 658 (671)
T 1ps9_A 601 DD--GLHVVINGETQVLAVDNVVICAGQEPNRALAQPLI------------------D-SGKTVHLIGGCDVAME-LDAR 658 (671)
T ss_dssp TT--EEEEEETTEEEEECCSEEEECCCEEECCTTHHHHH------------------T-TTCCEEECGGGTCCSS-CCHH
T ss_pred CC--eEEEecCCeEEEEeCCEEEECCCccccHHHHHHHH------------------h-cCCCEEEECCcCccCc-hhHH
Confidence 43 3433 567 5799999999999999987765321 1 2479999999997643 3588
Q ss_pred HHHHHHHHHHHHH
Q 017664 287 LAQKHALVTAKNL 299 (368)
Q Consensus 287 ~a~~~g~~aa~~i 299 (368)
.|++||+.+|.||
T Consensus 659 ~A~~~g~~aA~~i 671 (671)
T 1ps9_A 659 RAIAQGTRLALEI 671 (671)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=5.2e-26 Score=219.86 Aligned_cols=283 Identities=18% Similarity=0.205 Sum_probs=172.0
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeee-----e---------ccc----cc-ccceeec
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAV-----V---------EPS----FA-VRSVINH 73 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~-----~---------~~~----~~-~~~~~~~ 73 (368)
+.++||+|||||++|+++|.+|+ .|.+|+|||+++.+|+.|..-..- . .+. .. ...+...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 34689999999999999999998 599999999998877554211000 0 000 00 0000000
Q ss_pred c---ccc----C--ce--eE-EEeEEEEe--ecc----EEEecCCeEEEecEEEEecC--CCCCCCCchHH------HHH
Q 017664 74 G---DYL----S--NV--KI-VVSTAVSI--TDT----EVVTAGGQTFVYDYVVVATG--HVESVPKSRTE------RLS 127 (368)
Q Consensus 74 ~---~~~----~--~~--~~-~~~~~~~~--~~~----~v~~~~g~~~~~d~lvlAtG--~~~~~p~~~~~------~~~ 127 (368)
. .++ . ++ .+ ...++..+ +.. .|.+.+|+++.||+||+||| +.|..|++++. .++
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h 166 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFKGESFH 166 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEE
Confidence 0 000 0 11 11 12233333 333 78888999999999999999 66665554321 122
Q ss_pred HHHHHHH-------HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-ccccCchhHHHH-----------
Q 017664 128 QYEKDFE-------KVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL-LEFVGSRASQIA----------- 188 (368)
Q Consensus 128 ~~~~~~~-------~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-l~~~~~~~~~~~----------- 188 (368)
....... ....+++|+|||+|.+|+|+|..|.+ .+.+|++++|.+.. ++..++++....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~--~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~~ 244 (545)
T 3uox_A 167 SSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAE--TAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPTI 244 (545)
T ss_dssp GGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTT--TBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHHH
T ss_pred cccccccccccccccccCCCeEEEECCCccHHHHHHHHHh--hCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHHH
Confidence 2221111 22357999999999999999999985 47899999999873 333222111100
Q ss_pred --------------------------------------------------------------------------------
Q 017664 189 -------------------------------------------------------------------------------- 188 (368)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (368)
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~ 324 (545)
T 3uox_A 245 LEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAE 324 (545)
T ss_dssp HHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence
Q ss_pred --------------------HHHHHcCCcEEEe--cceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhcccc
Q 017664 189 --------------------LDWLTSKKVEVIL--NQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETIL 246 (368)
Q Consensus 189 --------------------~~~l~~~gv~i~~--~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l 246 (368)
.+.+.+.||+++. ...|+++..+ ++++.+| ++++|.||+|||+.+++.++....+
T Consensus 325 ~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~--gv~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i 401 (545)
T 3uox_A 325 KLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPE--GIKTADA-AYDLDVIIYATGFDAVTGSLDRIDI 401 (545)
T ss_dssp HTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETT--EEEESSC-EEECSEEEECCCCBSSSCSCTTSEE
T ss_pred hCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccC--eEEeCCC-eeecCEEEECCccccccccCCCceE
Confidence 1112233788876 6778776543 7899999 9999999999999976544332211
Q ss_pred ccccCCCCcEEeC----------CCeeecCCCCeEEecccCCC-CccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 247 KDSLDGRGRLMVD----------ENLRVRGFKNVFAIGDITDI-PEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 247 ~~~~~~~g~i~vd----------~~~~~~~~~~ifa~GD~~~~-~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
...+| ..++ ..+.+.+.||+|.+.--... ........+..|++.+++.|.....+
T Consensus 402 ---~g~~G-~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 467 (545)
T 3uox_A 402 ---RGKDN-VRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDN 467 (545)
T ss_dssp ---ECGGG-CBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ECCCC-ccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 11122 2222 23456689999997433221 12234567889999999988765543
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=2.4e-25 Score=215.94 Aligned_cols=286 Identities=17% Similarity=0.210 Sum_probs=177.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce--e---ee--------e-ccc------ccc----
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL--R---AV--------V-EPS------FAV---- 67 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~--~---~~--------~-~~~------~~~---- 67 (368)
.+..+||+|||||++|+++|..|+ .|.+|+|+|+++.+|+.|..- . .. . .+. ...
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~ 92 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYAS 92 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCB
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCC
Confidence 344689999999999999999998 499999999998876544210 0 00 0 000 000
Q ss_pred -cceeec----ccccC-ceeEE-EeEEEEee--c----cEEEecCCeEEEecEEEEecCC--CCCCCCchHH------HH
Q 017664 68 -RSVINH----GDYLS-NVKIV-VSTAVSIT--D----TEVVTAGGQTFVYDYVVVATGH--VESVPKSRTE------RL 126 (368)
Q Consensus 68 -~~~~~~----~~~~~-~~~~~-~~~~~~~~--~----~~v~~~~g~~~~~d~lvlAtG~--~~~~p~~~~~------~~ 126 (368)
..+..+ .+.+. +..+. ..++..++ . ..|.+.+|+++++|+||+|||. .|.+|.+++. .+
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~ 172 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLY 172 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceE
Confidence 000000 00000 11222 22344332 2 1577778888999999999995 4666554321 12
Q ss_pred HHHHHHHH-HHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-ccccCchh----H---------------
Q 017664 127 SQYEKDFE-KVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL-LEFVGSRA----S--------------- 185 (368)
Q Consensus 127 ~~~~~~~~-~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-l~~~~~~~----~--------------- 185 (368)
++.....+ ....+++|+|||+|.+|+|++..+.+. +.+|+++.|.+.. ++..+..+ .
T Consensus 173 hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~ 250 (542)
T 1w4x_A 173 HTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESR 250 (542)
T ss_dssp EGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHH
T ss_pred ECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhc--CceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHH
Confidence 22211101 123579999999999999999999864 7899999988765 23211100 0
Q ss_pred --------------------------------------------------------HHHHH-------------------
Q 017664 186 --------------------------------------------------------QIALD------------------- 190 (368)
Q Consensus 186 --------------------------------------------------------~~~~~------------------- 190 (368)
+.+.+
T Consensus 251 ~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~ 330 (542)
T 1w4x_A 251 NTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKG 330 (542)
T ss_dssp TSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCS
T ss_pred hhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCC
Confidence 00001
Q ss_pred ----------------HHHcCCcEEE--ecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCC
Q 017664 191 ----------------WLTSKKVEVI--LNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDG 252 (368)
Q Consensus 191 ----------------~l~~~gv~i~--~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~ 252 (368)
.+.+.+|+++ .+..|+++.. ++|++.| +++++|.||+|||+.++..++....+ ...
T Consensus 331 ~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~--~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~~~i---~g~ 404 (542)
T 1w4x_A 331 YPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP--RGVRTSE-REYELDSLVLATGFDALTGALFKIDI---RGV 404 (542)
T ss_dssp SCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS--SEEEESS-CEEECSEEEECCCCCCTTHHHHTSEE---ECG
T ss_pred CCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC--CeEEeCC-eEEecCEEEEcCCccccccCcCceee---ECC
Confidence 1112356665 2556776653 4788888 89999999999999987666654322 122
Q ss_pred CCcEEeC---------CCeeecCCCCeEEe-cccCCCCccchHHHHHHHHHHHHHHHHHHHcCC
Q 017664 253 RGRLMVD---------ENLRVRGFKNVFAI-GDITDIPEIKQGYLAQKHALVTAKNLKKLMMGR 306 (368)
Q Consensus 253 ~g~i~vd---------~~~~~~~~~~ifa~-GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~ 306 (368)
+|....+ ..+.+.+.||+|++ |+.+..........+..|++.++++|.....++
T Consensus 405 ~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~~ 468 (542)
T 1w4x_A 405 GNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNG 468 (542)
T ss_dssp GGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3433332 23666689999998 998643333356889999999999999877654
No 92
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.92 E-value=2.3e-25 Score=215.62 Aligned_cols=283 Identities=18% Similarity=0.186 Sum_probs=171.4
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecccee-----eeec-----ccccc---------cceeec
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLR-----AVVE-----PSFAV---------RSVINH 73 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~-----~~~~-----~~~~~---------~~~~~~ 73 (368)
..++||+|||||++|+++|..|+ .|.+|+|||+++.+|+.|..-. ..+. ..+.. ..+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 34679999999999999999998 5999999999988775442110 0000 00000 000000
Q ss_pred c---ccc------Cce--eEE-EeEEEEe--ecc----EEEecCCeEEEecEEEEecC--CCCCCCCchHHH------HH
Q 017664 74 G---DYL------SNV--KIV-VSTAVSI--TDT----EVVTAGGQTFVYDYVVVATG--HVESVPKSRTER------LS 127 (368)
Q Consensus 74 ~---~~~------~~~--~~~-~~~~~~~--~~~----~v~~~~g~~~~~d~lvlAtG--~~~~~p~~~~~~------~~ 127 (368)
. +++ .++ .+. ..++..+ +.. .|.+.+|+++.||+||+||| +.|..|++++.. ++
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~ 178 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVH 178 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEE
Confidence 0 000 011 222 2234444 333 77888898899999999999 556665543211 22
Q ss_pred HHHHH-HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-ccccCchhHHHHH----------------
Q 017664 128 QYEKD-FEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL-LEFVGSRASQIAL---------------- 189 (368)
Q Consensus 128 ~~~~~-~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-l~~~~~~~~~~~~---------------- 189 (368)
..... ......+++|+|||+|.+|+|+|..|.+. +.+|++++|.+.. +|..++++.....
T Consensus 179 ~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~--~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~ 256 (549)
T 4ap3_A 179 TARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQ--AEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRE 256 (549)
T ss_dssp GGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHH
T ss_pred eccccccccccCCCEEEEECCCchHHHHHHHHHhh--CCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHh
Confidence 22111 11123589999999999999999999964 7899999999873 3322211111100
Q ss_pred ------------------------------------------------------------------------H-------
Q 017664 190 ------------------------------------------------------------------------D------- 190 (368)
Q Consensus 190 ------------------------------------------------------------------------~------- 190 (368)
+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~ 336 (549)
T 4ap3_A 257 SGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDH 336 (549)
T ss_dssp SSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSC
T ss_pred hccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCC
Confidence 0
Q ss_pred ---------------HHHcCCcEEE--ecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCC
Q 017664 191 ---------------WLTSKKVEVI--LNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGR 253 (368)
Q Consensus 191 ---------------~l~~~gv~i~--~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~ 253 (368)
.+.+.+|+++ ....|+++.. .++++.+| ++++|.||+|||+.++..++....+ ..+
T Consensus 337 ~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~--~gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i----~g~ 409 (549)
T 4ap3_A 337 AIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDE--TGIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEI----VGR 409 (549)
T ss_dssp CBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEET--TEEEESSC-EEECSEEEECCCEEESSTTGGGSEE----ECG
T ss_pred CCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeC--CcEEeCCC-ceecCEEEECCcccccccccCceeE----ECC
Confidence 0123378877 2466776654 37899999 9999999999999987544433221 111
Q ss_pred CcEEeC----------CCeeecCCCCeEEecc-cCCCCccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 254 GRLMVD----------ENLRVRGFKNVFAIGD-ITDIPEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 254 g~i~vd----------~~~~~~~~~~ifa~GD-~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
+...++ ..+.+.+.||+|.+.- -...........+..|++.+++.|.....+
T Consensus 410 ~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~~~ 472 (549)
T 4ap3_A 410 GGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDAR 472 (549)
T ss_dssp GGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHHHHC
Confidence 122232 2355668999999633 322122235567889999999888765544
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=7.9e-23 Score=169.66 Aligned_cols=156 Identities=21% Similarity=0.221 Sum_probs=131.4
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------cc-----CchhHHHHHHHHHcCCcEEEecceee
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---------FV-----GSRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---------~~-----~~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
+++|||+|++|+++|..|.+ .+.+|+++++.+..++ .+ ++++.+.+.+.+++.|++++++ +++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~ 79 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLAR--AGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVK 79 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCC
T ss_pred eEEEECCCHHHHHHHHHHHH--CCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEE
Confidence 68999999999999999986 4789999999876552 22 3567888889999999999999 999
Q ss_pred ecccCCC--eEEcCCCcEEecCEEEEccCCCCCchhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCccch
Q 017664 207 LNTISDG--LIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQ 284 (368)
Q Consensus 207 ~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~~~~ 284 (368)
+++.+++ .+.+++| ++++|.+|+|+|..|+ +.+..++ +++ +|++.||+++|+ +.|+|||+|||+..+. ++
T Consensus 80 ~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~--~~~~~g~--~~~-~g~i~vd~~~~t-~~~~i~a~GD~~~~~~-~~ 151 (180)
T 2ywl_A 80 GVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT--LPSLLGL--TRR-GAYIDTDEGGRT-SYPRVYAAGVARGKVP-GH 151 (180)
T ss_dssp EEEECSSSEEEECSSC-EEEEEEEEECCTTCCH--HHHHHTC--CEE-TTEECCCTTCBC-SSTTEEECGGGGTCCS-CC
T ss_pred EEEEcCCEEEEEECCC-EEEECEEEECCCCCCC--ccccCCC--Ccc-CceEEeCCCCCc-CCCCEEEeecccCcch-hh
Confidence 8876654 6788888 8999999999999974 3444444 566 899999999999 8999999999998754 36
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Q 017664 285 GYLAQKHALVTAKNLKKLMMGRN 307 (368)
Q Consensus 285 ~~~a~~~g~~aa~~i~~~l~g~~ 307 (368)
+..|.+||+.||.||.+.+.+++
T Consensus 152 ~~~A~~~g~~aa~~i~~~~~~~~ 174 (180)
T 2ywl_A 152 AIISAGDGAYVAVHLVSDLRGEP 174 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhHHHHHHHHHHHhhhcc
Confidence 88999999999999999888763
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.87 E-value=9.3e-21 Score=181.76 Aligned_cols=195 Identities=12% Similarity=0.169 Sum_probs=118.3
Q ss_pred eEEEecEEEEecCCCCCCCCch---HHHHHHHHHHH------HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEe
Q 017664 101 QTFVYDYVVVATGHVESVPKSR---TERLSQYEKDF------EKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVH 171 (368)
Q Consensus 101 ~~~~~d~lvlAtG~~~~~p~~~---~~~~~~~~~~~------~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~ 171 (368)
.++.++.||+|||..|.+|+.. ..-+++..... .....+|+|+|||+|.||+|++..|.++..+.+|+++.
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 4688999999999998888742 22222222111 12246899999999999999999998777788999999
Q ss_pred cCcccccc---------cCchhHHHH-------------------------------H-----HHHH-----cCCcEEEe
Q 017664 172 RGPKLLEF---------VGSRASQIA-------------------------------L-----DWLT-----SKKVEVIL 201 (368)
Q Consensus 172 ~~~~~l~~---------~~~~~~~~~-------------------------------~-----~~l~-----~~gv~i~~ 201 (368)
|++.+.+. +.++..+.+ . +.+. .....+..
T Consensus 279 R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~ 358 (501)
T 4b63_A 279 RDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILP 358 (501)
T ss_dssp SSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEEC
T ss_pred CCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccceeecC
Confidence 98765431 122211111 0 1111 01123444
Q ss_pred cceeeecccCC----------------CeEEcCCCcEEecCEEEEccCCCCCc-hhhhccccccccCCCCcEEeCCCeee
Q 017664 202 NQSVTLNTISD----------------GLIETSSGETIDTDCHFMCTGKAMAS-SWLRETILKDSLDGRGRLMVDENLRV 264 (368)
Q Consensus 202 ~~~v~~i~~~~----------------~~v~~~~g~~i~~d~vi~a~G~~p~~-~~~~~~~l~~~~~~~g~i~vd~~~~~ 264 (368)
+..+..++... ..+.+.+|+++++|.||+|||++++. +++....-.+..+.+|.+.|+.+++.
T Consensus 359 ~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~v~rdy~~ 438 (501)
T 4b63_A 359 ERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWKPHRDYRV 438 (501)
T ss_dssp SEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCCBCTTSBB
T ss_pred CcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCeeeCCCcEE
Confidence 44443332211 14557788999999999999999874 34333222235677788899987665
Q ss_pred c-------CCCCeEEecccC---CCCccchHHHHHHHHHHH
Q 017664 265 R-------GFKNVFAIGDIT---DIPEIKQGYLAQKHALVT 295 (368)
Q Consensus 265 ~-------~~~~ifa~GD~~---~~~~~~~~~~a~~~g~~a 295 (368)
. ..++||+.|-+- +...+.+...|.+.|+++
T Consensus 439 ~~~~~~~~~~~~i~~qg~~~~thG~~~~~Ls~~a~R~~~I~ 479 (501)
T 4b63_A 439 EMDPSKVSSEAGIWLQGCNERTHGLSDSLLSVLAVRGGEMV 479 (501)
T ss_dssp CCCTTTBCTTCEEEECSCCHHHHCTTTTSSTTHHHHHHHHH
T ss_pred eecCCccCCCceEEecCCCcccCCcchhhHHHHHHHHHHHH
Confidence 2 246799998543 222333556788877643
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.60 E-value=2.9e-15 Score=129.07 Aligned_cols=156 Identities=19% Similarity=0.159 Sum_probs=108.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-----------------ccccc-------CchhHHHHHHHHHcC
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-----------------LLEFV-------GSRASQIALDWLTSK 195 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-----------------~l~~~-------~~~~~~~~~~~l~~~ 195 (368)
.+|+|||+|++|+++|..|++ .+.+|+++++... +...+ ...+...+.+.+++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~--~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~ 81 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ--KGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGL 81 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcC
Confidence 479999999999999999986 4889999998721 11111 125567777888887
Q ss_pred -CcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCCch--------------------h---hhcccccc
Q 017664 196 -KVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMASS--------------------W---LRETILKD 248 (368)
Q Consensus 196 -gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~~~--------------------~---~~~~~l~~ 248 (368)
|++++ +++|+++..+++ .+.+.+|+++++|.||+|+|..++.. + +...++
T Consensus 82 ~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~-- 158 (232)
T 2cul_A 82 RPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGF-- 158 (232)
T ss_dssp TTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTC--
T ss_pred CCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCC--
Confidence 99999 568888876555 47788888899999999999854321 1 111111
Q ss_pred ccCCC--------Cc-------EEeCC------CeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHH
Q 017664 249 SLDGR--------GR-------LMVDE------NLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLM 303 (368)
Q Consensus 249 ~~~~~--------g~-------i~vd~------~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l 303 (368)
.++.. |. ..+.. .+..++.|+||++|||+ ... +...|..||+.+|.+|.+.|
T Consensus 159 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g--~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 159 RFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG--DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp CEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC--CHHHHHHHHHHHHHHHHHHC
T ss_pred eEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc--cHHHHHHHHHHHHHHHHhhc
Confidence 11100 00 11111 22324899999999999 544 67788999999999998765
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.58 E-value=2.3e-16 Score=150.14 Aligned_cols=181 Identities=16% Similarity=0.084 Sum_probs=103.2
Q ss_pred eEEEecEEEEecCCCCCCCCc-------hHHHHHHHHHH------HHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeE
Q 017664 101 QTFVYDYVVVATGHVESVPKS-------RTERLSQYEKD------FEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKV 167 (368)
Q Consensus 101 ~~~~~d~lvlAtG~~~~~p~~-------~~~~~~~~~~~------~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v 167 (368)
..+.+|.+|+|||..+..+.. .+..+.-.... .+........+++|+| +++++..+.. .+..+
T Consensus 161 g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~--~G~~~ 236 (472)
T 2e5v_A 161 LVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLRG--EGAQI 236 (472)
T ss_dssp EECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHHH--TTCEE
T ss_pred CeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhcC--CceEE
Confidence 357799999999998544332 23333222221 0101111233445665 6666666653 35555
Q ss_pred EEEecCcccccccCchh--------HHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEe-cCEEEEccCCCCCc
Q 017664 168 ILVHRGPKLLEFVGSRA--------SQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETID-TDCHFMCTGKAMAS 238 (368)
Q Consensus 168 ~~i~~~~~~l~~~~~~~--------~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~-~d~vi~a~G~~p~~ 238 (368)
+..+++++++.+++.. ...+.+.+++.|. ++.+... +. . + .++++ .+.++.+.|..|+
T Consensus 237 -v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~~~--~~---~---~--~~~~~~~~~~~~~~G~dp~- 303 (472)
T 2e5v_A 237 -INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDLSK--IE---D---F--ERKFPVVAKYLARHGHNYK- 303 (472)
T ss_dssp -EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEECTT--CT---T---H--HHHCHHHHHHHHHTTCCTT-
T ss_pred -ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEeccc--hH---H---H--HHHhHHHHHHHHHhCcCcc-
Confidence 7778888887666544 5566666766664 3333211 00 0 0 01233 4677888899988
Q ss_pred hhhhccccccccCCCCcEEeCCCeeecCCCCeEEecccCCCCc---cchHHHHHHHHHHHHHHHHH
Q 017664 239 SWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPE---IKQGYLAQKHALVTAKNLKK 301 (368)
Q Consensus 239 ~~~~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~~~---~~~~~~a~~~g~~aa~~i~~ 301 (368)
+++..... .....|.|.||+++|| +.|++||+|||++... ..++..+..++.+.++.+..
T Consensus 304 ~~i~v~p~--~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~ 366 (472)
T 2e5v_A 304 VKIPIFPA--AHFVDGGIRVNIRGES-NIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPR 366 (472)
T ss_dssp SCEECEEE--EEEESCEEECCTTCBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGG
T ss_pred cceEeehh--hceeCCCeEECCCCcc-ccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHH
Confidence 55443222 1223689999999999 7999999999987211 12444555554444444443
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.56 E-value=4.3e-18 Score=154.61 Aligned_cols=243 Identities=14% Similarity=0.016 Sum_probs=124.3
Q ss_pred CCCcEEEECCChHHHHHHHHhh---cCCcEEEEcCCCceeeeccceeeeecccccccceeec-cccc--CceeEEEeEEE
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ---SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINH-GDYL--SNVKIVVSTAV 88 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~---~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~ 88 (368)
..+||+|||||||||+||++|+ .|++|+|||+++..|+......... ....+... ..++ .++++...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~----~~~~l~~~~~~~~~e~Gv~~~~~--- 136 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLF----SAMVMRKPAHLFLQELEIPYEDE--- 136 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTC----CCEEEETTTHHHHHHTTCCCEEC---
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccC----CHHHHHHHHHHHHHHcCCEEEEC---
Confidence 3579999999999999999995 3999999999988775432111000 00000000 0000 12332211
Q ss_pred EeeccEEEecCCeEEEecEEEEecCCC---CCCCCchHH---HHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhC
Q 017664 89 SITDTEVVTAGGQTFVYDYVVVATGHV---ESVPKSRTE---RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDF 162 (368)
Q Consensus 89 ~~~~~~v~~~~g~~~~~d~lvlAtG~~---~~~p~~~~~---~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~ 162 (368)
+......+..+++++.. +..|+.... ....+..........++++++|+|.++++.|..+. .
T Consensus 137 ----------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~--~ 204 (326)
T 3fpz_A 137 ----------GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQ--C 204 (326)
T ss_dssp ----------SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSS--S
T ss_pred ----------CcceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhh--h
Confidence 11111112222222222 111111000 00000000011234789999999999999998776 3
Q ss_pred CCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC-eEEcCCCcEEecCEEEEccCCCCCchhh
Q 017664 163 PDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG-LIETSSGETIDTDCHFMCTGKAMASSWL 241 (368)
Q Consensus 163 ~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 241 (368)
...++++..+.......... ......+ ......++ .........+++|.++.+.|..+.....
T Consensus 205 ~~~~v~i~~~~~~~~~~~~~----------~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 268 (326)
T 3fpz_A 205 AMDPNVIELAGYKNDGTRDL----------SQKHGVI------LSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNH 268 (326)
T ss_dssp CCCCEEEEESCBCTTSSBCT----------TSCCCEE------EECCCSCSSSCSHHHHHHHHHCTTCCCCCCCCBCHHH
T ss_pred ccCcEEEEeecccccccccc----------eeecceE------EEEecceeeEeecceeEEEecCceeeecceecccccc
Confidence 56788887766543211100 0000011 11111111 0000111245567777777776532211
Q ss_pred hccccccccCCCCcEEeCCCeeecCCCCeEEecccCCC----C--ccchHHHHHHHHHHHHHHHHHHHc
Q 017664 242 RETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDI----P--EIKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 242 ~~~~l~~~~~~~g~i~vd~~~~~~~~~~ifa~GD~~~~----~--~~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
. .+.+.++..++| +.|+|||+||+++. + .| +...++.+|+.||+.|.++|.
T Consensus 269 ~----------e~~iv~~~~~~t-~vpGv~aaGDaa~~v~g~~rmGp-~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 269 A----------EHDVVIHSGAYA-GVDNMYFAGMEVAELDGLNRMGP-TFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp H----------HHHHHHHCEECT-TSBTEEECTHHHHHHHTCCBCCS-CCHHHHHHHHHHHHHHHHHHH
T ss_pred c----------CCeEEECCCeEE-CCCCEEEEchHhccccCCCcCch-HHHHHHHHHHHHHHHHHHHhc
Confidence 1 234566777777 89999999998742 0 11 223456789999999998874
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=2.1e-13 Score=126.85 Aligned_cols=39 Identities=18% Similarity=0.316 Sum_probs=34.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCcee
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFE 51 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~ 51 (368)
|++++||+|||||++|+++|..|+ +|.+|+|+|+++..+
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g 40 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIG 40 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCc
Confidence 345689999999999999999997 599999999998653
No 99
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.35 E-value=3.4e-12 Score=123.69 Aligned_cols=141 Identities=18% Similarity=0.219 Sum_probs=81.7
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC-ceeeeccc--------------e---ee--------------ee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE-YFEITWAS--------------L---RA--------------VV 61 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~-~~~~~~~~--------------~---~~--------------~~ 61 (368)
..+||||||||+||++||..|+ .|.+|+|||++. .++...+. + .. ..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 4689999999999999999997 599999999984 22210000 0 00 00
Q ss_pred ----ccccc-----------ccceeecccccCceeEEEeEEEEee--cc---EEEecCCeEEEecEEEEecCCCCCCCCc
Q 017664 62 ----EPSFA-----------VRSVINHGDYLSNVKIVVSTAVSIT--DT---EVVTAGGQTFVYDYVVVATGHVESVPKS 121 (368)
Q Consensus 62 ----~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~v~~~~g~~~~~d~lvlAtG~~~~~p~~ 121 (368)
.+... ...+....+...++++++..+..+. .. .|.+.+|..+.+|.||+|||..+..+.+
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCccc
Confidence 00000 0000000001136788788888774 33 3567788889999999999998654433
Q ss_pred hHHHHHHHHHHHHHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEe
Q 017664 122 RTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVH 171 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~ 171 (368)
.+.. .. .+.+ +| +.++.+++..|.+ .+.+|+.+.
T Consensus 187 ~G~~--~~--------~~gr---iG-g~~a~eLA~~L~~--lG~~v~~~~ 220 (651)
T 3ces_A 187 IGLD--NY--------SGGR---AG-DPPSIPLSRRLRE--LPLRVGRLK 220 (651)
T ss_dssp CC---------------------------CCHHHHHHHT--TTCCEEEEC
T ss_pred cCcc--cC--------CCCC---cc-chhhhHHHHHHHh--cCCeEEEec
Confidence 2111 10 1222 46 7888999998874 478887774
No 100
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.34 E-value=3.2e-14 Score=134.00 Aligned_cols=95 Identities=15% Similarity=0.112 Sum_probs=72.2
Q ss_pred CchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccC--------CCCCchhhhcccccccc
Q 017664 181 GSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTG--------KAMASSWLRETILKDSL 250 (368)
Q Consensus 181 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G--------~~p~~~~~~~~~l~~~~ 250 (368)
+..+...+...+++.| +++++++|++|+.+++ .|.+.+|+++++|.||+|+| +.|+.+......+...
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~- 280 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEG- 280 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHC-
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhC-
Confidence 4455566666777778 9999999999987655 67788888899999999999 7777655544444322
Q ss_pred CCCCcEEeCCCeeecCCCCeEEecccCC
Q 017664 251 DGRGRLMVDENLRVRGFKNVFAIGDITD 278 (368)
Q Consensus 251 ~~~g~i~vd~~~~~~~~~~ifa~GD~~~ 278 (368)
.....+.|+..+++ ..+++|+.||+..
T Consensus 281 ~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 281 HGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 22345899999998 5799999999854
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.21 E-value=8.7e-11 Score=113.45 Aligned_cols=47 Identities=15% Similarity=0.218 Sum_probs=40.0
Q ss_pred CCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCC
Q 017664 259 DENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNK 308 (368)
Q Consensus 259 d~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~ 308 (368)
+++|+++..||+|.+|.+.+... -..|..||.+|+.|.+..+.|+++
T Consensus 381 ~~tLe~k~~~gLf~AGqinGt~G---yeEAaaqGl~AG~nAa~~~~~~~~ 427 (637)
T 2zxi_A 381 YPTLETKKIRGLFHAGNFNGTTG---YEEAAGQGIVAGINAALRAFGKEP 427 (637)
T ss_dssp CTTSBBSSSBTEEECGGGGTBCS---HHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CccccccCCCCEEEeeecCCcch---HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35799988999999999998633 347999999999999999998864
No 102
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.20 E-value=8.5e-11 Score=104.18 Aligned_cols=165 Identities=13% Similarity=0.068 Sum_probs=108.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------c
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF--------------------------------------V 180 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~--------------------------------------~ 180 (368)
..+|+|||+|++|+.+|..+++ .++.+|+++++.+.+... .
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~-~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISK-NPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-STTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHH-cCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecC
Confidence 4579999999999999999985 248899999987643210 1
Q ss_pred CchhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcC---------CC-----cEEecCEEEEccCCCCCch---
Q 017664 181 GSRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETS---------SG-----ETIDTDCHFMCTGKAMASS--- 239 (368)
Q Consensus 181 ~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~---------~g-----~~i~~d~vi~a~G~~p~~~--- 239 (368)
...+...+.+.+.+ .|+++++++.|.++..+++ .+.+. +| .++++|.+|+|+|..+...
T Consensus 118 ~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 12334455566655 7999999999998876555 33331 32 5799999999999776532
Q ss_pred --hhhccccccccCCCCcEEeCC-------CeeecCCCCeEEecccCCC----C-ccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 240 --WLRETILKDSLDGRGRLMVDE-------NLRVRGFKNVFAIGDITDI----P-EIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 240 --~~~~~~l~~~~~~~g~i~vd~-------~~~~~~~~~ifa~GD~~~~----~-~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
.+...++...+.....+.++. ..++ ..|++|++||++.. + ..++...+..+|+.+|.+|.+.|..
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 111111111222222233332 3344 47999999998632 1 0113456789999999999998854
No 103
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.12 E-value=8.3e-11 Score=113.97 Aligned_cols=46 Identities=20% Similarity=0.309 Sum_probs=39.2
Q ss_pred CCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCC
Q 017664 260 ENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNK 308 (368)
Q Consensus 260 ~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~ 308 (368)
++|+++..||+|++|++++... -..|..||.+|+.|++..+.|+++
T Consensus 371 ~tle~k~~~gLf~AGqi~g~~G---y~eA~a~G~~AG~naa~~~~~~~~ 416 (641)
T 3cp8_A 371 STMETRPVENLFFAGQINGTSG---YEEAAAQGLMAGINAVRKILGKEL 416 (641)
T ss_dssp TTSBBSSSBTEEECSGGGTBCC---HHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CcccccCcCCEEEEEeecCCcc---HHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4789977999999999998743 248999999999999999988764
No 104
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.12 E-value=3.9e-10 Score=104.35 Aligned_cols=38 Identities=29% Similarity=0.423 Sum_probs=33.8
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCcee
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFE 51 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~ 51 (368)
|+++||+||||||||+++|+.|+ +|++|+|+|+.+.++
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 34699999999999999999998 599999999987654
No 105
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.11 E-value=6.1e-10 Score=103.90 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=46.3
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..+.+.+.+.+++.|++++++++|+.+..+++ .+.+.+| ++.+|.||+|+|..+
T Consensus 132 ~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 132 KDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 36777888889999999999999999887655 6778887 899999999999875
No 106
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.05 E-value=1.6e-09 Score=100.82 Aligned_cols=53 Identities=17% Similarity=0.046 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++++++|+.+..+++ .+.+.+| ++.+|.||+|+|...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 6677788889999999999999999887654 4777777 799999999999763
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.04 E-value=2.2e-09 Score=102.92 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=47.1
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+.+.+.+.+++.|++|+++++|++|..+++ .|++.||+++++|.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 36788889999999999999999999998877 5889999999999999988754
No 108
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.01 E-value=5.6e-09 Score=95.62 Aligned_cols=62 Identities=8% Similarity=0.055 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCC--cEEecCEEEEccCCCCCchhhhcc
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSG--ETIDTDCHFMCTGKAMASSWLRET 244 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g--~~i~~d~vi~a~G~~p~~~~~~~~ 244 (368)
..+...+.+.+++.|++++++++|++++.+++ .+.+.+| .++++|.||+|+|.. ...++...
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGG-HHHHHHTE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcc-hHHHHHHh
Confidence 46778888899999999999999999987643 5777777 489999999999976 33444444
No 109
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.01 E-value=1.9e-09 Score=101.55 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=46.5
Q ss_pred chhHHHHHHHHHcCCcEEEecc---eeeecccCCC---eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQ---SVTLNTISDG---LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~---~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|+++++++ +|+++..+++ .|++.+|+++.+|.||+|+|..
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 3567788888999999999999 9999887655 3889999889999999999965
No 110
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.00 E-value=2.2e-10 Score=110.09 Aligned_cols=51 Identities=14% Similarity=0.009 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTG 233 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G 233 (368)
.+.+.+.+.+++.|++++++++|++|..+++.+++.+|+++++|.||.++.
T Consensus 223 ~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 223 GIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 566777778888999999999999999888889999999999999999865
No 111
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.99 E-value=6.3e-10 Score=106.86 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
..+.+.+.+.+++.|++++++++|+.+..+++ .+.+.+|+++++|.||+|+|..+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 46677788889999999999999999987665 578899999999999999999864
No 112
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.99 E-value=1.2e-09 Score=100.80 Aligned_cols=54 Identities=13% Similarity=0.054 Sum_probs=45.6
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..+...+.+.+++.|++++.+++|++++.+++ .+.+.+| ++.+|.||+|+|...
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 46778888889999999999999999877655 5677777 799999999999763
No 113
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.95 E-value=1.2e-09 Score=102.37 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=50.0
Q ss_pred CchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCchhh
Q 017664 181 GSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWL 241 (368)
Q Consensus 181 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 241 (368)
...+.+.+.+.+++.|++++++++|++++.+++.+.+.+|+++++|.||+|+|......++
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHHHHhc
Confidence 3477888999999999999999999999887664456678899999999999976444444
No 114
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.95 E-value=1.3e-09 Score=100.54 Aligned_cols=53 Identities=15% Similarity=0.109 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|++++.+++ .|.+.+| ++.+|.||+|+|..
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChh
Confidence 46677888889999999999999999887665 6778887 79999999999975
No 115
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.91 E-value=2e-08 Score=92.59 Aligned_cols=54 Identities=11% Similarity=0.153 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
.+.+.+.+.+++.|++++.+++|+.++.+. .+.+.+|+++++|.||.|+|..+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 567778888888999999999999887744 788888989999999999998753
No 116
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.90 E-value=2e-08 Score=92.75 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=52.8
Q ss_pred CeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCC
Q 017664 165 KKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 165 ~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
....++.+....+. +..+...+.+.+++.|++++++++|++++.+++ .+.+.+| ++++|.||+|+|...
T Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp TEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred CceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 45666666544332 346778888899999999999999999887655 5666666 799999999999763
No 117
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.89 E-value=1.6e-08 Score=93.29 Aligned_cols=54 Identities=15% Similarity=0.017 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--e-EEcCCCcEEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--L-IETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~-v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..+...+.+.+++.|++++.+++|++++.+++ . +.+.+| ++.+|.||+|+|...
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 45677788889999999999999999887655 3 777777 799999999999763
No 118
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.89 E-value=2.5e-09 Score=91.68 Aligned_cols=101 Identities=17% Similarity=0.057 Sum_probs=62.9
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc-eeeecccee----------eeec----c--cccccceeecccc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY-FEITWASLR----------AVVE----P--SFAVRSVINHGDY 76 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~-~~~~~~~~~----------~~~~----~--~~~~~~~~~~~~~ 76 (368)
+++||+|||||++|+++|..|+ .|.+|+|||++.. .+ .+.... .... + ....+.+....+.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 4689999999999999999998 4999999999832 22 110000 0000 0 0000000011111
Q ss_pred cCceeEEEeEEEEeec--c---EEEecCCeEEEecEEEEecCCCC
Q 017664 77 LSNVKIVVSTAVSITD--T---EVVTAGGQTFVYDYVVVATGHVE 116 (368)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~---~v~~~~g~~~~~d~lvlAtG~~~ 116 (368)
..+++++...+..+.. . .+.+.++..+++|+||+|+|..+
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 1367777666766653 2 36677888899999999999974
No 119
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.89 E-value=2.1e-08 Score=99.70 Aligned_cols=54 Identities=7% Similarity=0.058 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCc-EEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGE-TIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~-~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|++++.+++ .+.+.+|+ ++.+|.||+|+|..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR 468 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc
Confidence 46778888889999999999999999987765 67788886 89999999999976
No 120
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.89 E-value=5.3e-10 Score=107.71 Aligned_cols=42 Identities=26% Similarity=0.402 Sum_probs=35.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
|++++||+|||||++||+||..|++ |++|+|+|+++..|+..
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 3456899999999999999999984 99999999999887553
No 121
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.87 E-value=3.9e-08 Score=97.65 Aligned_cols=54 Identities=7% Similarity=0.174 Sum_probs=46.8
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|+++..+++ .|.+.+|.++.+|.||+|+|..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQ 472 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcc
Confidence 46778888889999999999999999987666 6777787789999999999976
No 122
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.87 E-value=2e-09 Score=88.48 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=61.8
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecc--cc-cccceeeccccc--CceeEEEeEEEE
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEP--SF-AVRSVINHGDYL--SNVKIVVSTAVS 89 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~--~~~~~~~~~~~~ 89 (368)
++|++|||||++|+.+|..|+ .|.+|+|+|+++........+...... .. ..+......+.+ .+++++..++..
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~~v~~ 80 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPGVVKG 80 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEECCCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeCEEEE
Confidence 368999999999999999998 499999999987322110000000000 00 000000011111 256776666666
Q ss_pred eecc----EEEecCCeEEEecEEEEecCCCCC
Q 017664 90 ITDT----EVVTAGGQTFVYDYVVVATGHVES 117 (368)
Q Consensus 90 ~~~~----~v~~~~g~~~~~d~lvlAtG~~~~ 117 (368)
++.. .+.+.++ .+++|.||+|+|..|.
T Consensus 81 i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 81 VRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp EEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred EEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 6532 5667777 8999999999999973
No 123
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.83 E-value=5.7e-09 Score=96.70 Aligned_cols=54 Identities=6% Similarity=-0.030 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEc---CCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG---LIET---SSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~---~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+++|+.++.+++ .|.+ .++.++++|.||.|+|...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 4556677778888999999999998887665 2555 3556899999999999764
No 124
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.82 E-value=3.2e-08 Score=92.13 Aligned_cols=53 Identities=17% Similarity=0.149 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
.+.+.+.+.+++ ++++.+++|+.++.+++ .+.+.+|+++++|+||.|.|....
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 455666666666 89999999999987766 678889999999999999997643
No 125
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.81 E-value=5.6e-08 Score=90.21 Aligned_cols=51 Identities=8% Similarity=-0.010 Sum_probs=40.2
Q ss_pred hHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCC
Q 017664 184 ASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 184 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
+.+.+.+.+ .|++++.+++|++++.+++ .+.+.+|+++++|+||.|.|...
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 334444443 4899999999999887655 67888998999999999999764
No 126
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.80 E-value=9.5e-09 Score=96.11 Aligned_cols=54 Identities=19% Similarity=0.126 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC----eEEcCCCc--EEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG----LIETSSGE--TIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~----~v~~~~g~--~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+++|+.++.+++ .+.+.+|+ ++.+|.||.|+|...
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 4556677777888999999999998887654 45668887 799999999999753
No 127
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.80 E-value=1.3e-08 Score=95.36 Aligned_cols=59 Identities=15% Similarity=0.080 Sum_probs=47.2
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCCchhh
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMASSWL 241 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 241 (368)
..+.+.+.+.+++.|++++++++|++|..+++ .|.++ |+++++|.||+|++......++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 46788888999999999999999999987766 25554 7789999999999865433333
No 128
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.78 E-value=1.3e-08 Score=99.12 Aligned_cols=54 Identities=22% Similarity=0.256 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcC-CC--cEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETS-SG--ETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~-~g--~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+++|+.+..+++ .|.+. +| +++++|.||.|+|...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 4566777888889999999999999886533 56665 66 5899999999999764
No 129
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.76 E-value=6.5e-09 Score=97.61 Aligned_cols=97 Identities=24% Similarity=0.285 Sum_probs=76.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc--cc---------CchhHHHHHHHHHcCCcEEEecceeee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE--FV---------GSRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~--~~---------~~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
.|+|+|||+|+.|+.+|..|++..++.+|+++++++.+.- .+ ..++...+.+.+++.||+++.+ +|+.
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 3789999999999999999997767789999999876421 10 1111122345567789999876 6888
Q ss_pred cccCCCeEEcCCCcEEecCEEEEccCCCC
Q 017664 208 NTISDGLIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 208 i~~~~~~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
|+.++..|.+++|+++++|.+|+|||.++
T Consensus 81 Id~~~~~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 81 IDPDANTVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp EETTTTEEEETTCCEEECSEEEECCCCEE
T ss_pred EECCCCEEEECCCCEEECCEEEEeCCCCc
Confidence 88887799999999999999999999864
No 130
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.76 E-value=3.2e-08 Score=93.32 Aligned_cols=55 Identities=18% Similarity=0.250 Sum_probs=46.6
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..+.+.+.+.+++.||+++++++|+.+..+++ .|.+.+|+++.+|.||+|+|..+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 46677888888999999999999998876554 57788888899999999999775
No 131
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.73 E-value=7.9e-08 Score=88.24 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=44.4
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++.+++|++++.+++ .+.+.+| ++.+|.||+|+|..
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCcc
Confidence 35677788888999999999999999887655 6777777 49999999999965
No 132
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.72 E-value=3.2e-08 Score=89.92 Aligned_cols=43 Identities=19% Similarity=0.212 Sum_probs=35.6
Q ss_pred HHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCC
Q 017664 192 LTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 192 l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~ 234 (368)
.++.|++++++++|++++.+++ .+.+.+|+++.+|.||+|+..
T Consensus 119 ~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 119 LKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 3344899999999999987665 677888887899999999873
No 133
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.71 E-value=5.1e-10 Score=109.68 Aligned_cols=59 Identities=10% Similarity=0.090 Sum_probs=45.5
Q ss_pred HcCCcEEEecceeeecccCCC-----eEEc---CCCc--EEecCEEEEccCCCCCchhhhccccccccC
Q 017664 193 TSKKVEVILNQSVTLNTISDG-----LIET---SSGE--TIDTDCHFMCTGKAMASSWLRETILKDSLD 251 (368)
Q Consensus 193 ~~~gv~i~~~~~v~~i~~~~~-----~v~~---~~g~--~i~~d~vi~a~G~~p~~~~~~~~~l~~~~~ 251 (368)
++.|+++++++.|+++..+++ .|+. .+|+ ++++|.||+|+|..+++.++..++++...+
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~~~~ 339 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQLGR 339 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSCCSS
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCcccc
Confidence 345899999999999876532 3443 3454 788999999999999999998888766433
No 134
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.71 E-value=2.3e-07 Score=85.91 Aligned_cols=52 Identities=12% Similarity=0.060 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+...+.+.+++.|++++++++|++++.+++ .+.+.+| ++.+|.||+|+|..
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 4567778888899999999999999877655 5566665 79999999999975
No 135
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.71 E-value=7.5e-08 Score=88.90 Aligned_cols=99 Identities=19% Similarity=0.270 Sum_probs=78.5
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---cc---------CchhHHHHHHHHHcCCcEEEeccee
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---FV---------GSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---~~---------~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
+.-+|+|||+|+.|+.+|..|. ..+.+|+++++.+.+.. .+ ..++.....+.+++.||+++++++|
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~--~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAAL--GKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHT--TTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred CCCCEEEEcCcHHHHHHHHHHh--CCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 3568999999999999999994 56889999998875321 10 1122223456778899999999999
Q ss_pred eecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+.+..++..+.+.+|+++.+|.+|+|||.+|..
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~ 118 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGSIANK 118 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCCCcCC
Confidence 999887779999999999999999999987653
No 136
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.71 E-value=1.4e-07 Score=87.50 Aligned_cols=55 Identities=11% Similarity=0.206 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHcC-CcEEEecceeeecccCCC----eEEcCCCcEEecCEEEEccCCCCC
Q 017664 183 RASQIALDWLTSK-KVEVILNQSVTLNTISDG----LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 183 ~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~----~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
.+.+.+.+.+++. |++++.+++|+.++.+++ .+.+.+|+++++|.||.|+|....
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 5667788888887 999999999999877654 466788889999999999998753
No 137
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.70 E-value=3e-08 Score=92.12 Aligned_cols=100 Identities=20% Similarity=0.288 Sum_probs=76.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc--c--------cCchhHHHHHHHHHcCCcEEEecceeeec
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE--F--------VGSRASQIALDWLTSKKVEVILNQSVTLN 208 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~--~--------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 208 (368)
+|||+|||+|+.|+.+|..|++..++.+|+++++++.+.. . .+.+....-.+.+.++||+++.+ .++.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 6899999999999999999987666789999998875321 0 11111111124556789999865 67888
Q ss_pred ccCCCeEEcCCCcEEecCEEEEccCCCCCch
Q 017664 209 TISDGLIETSSGETIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 209 ~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 239 (368)
+.++..+.+.+|+++++|.+|+|+|.+++.+
T Consensus 81 d~~~~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 81 DPDKKLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCEEECGG
T ss_pred EccCcEEEecccceeecceeeeccCCccccC
Confidence 8877789999999999999999999887654
No 138
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.66 E-value=1.4e-07 Score=85.15 Aligned_cols=48 Identities=8% Similarity=0.022 Sum_probs=37.7
Q ss_pred HHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEe-cCEEEEccCCC
Q 017664 187 IALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETID-TDCHFMCTGKA 235 (368)
Q Consensus 187 ~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~-~d~vi~a~G~~ 235 (368)
.+.+.+.+ |++++++++|+.++.+++ .+.+.+|+.+. +|.||.|+|..
T Consensus 111 ~l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~ 161 (336)
T 1yvv_A 111 AITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAP 161 (336)
T ss_dssp HHHHHHHT-TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHH
T ss_pred HHHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHH
Confidence 34444444 899999999999987655 67788887664 99999999865
No 139
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.62 E-value=4.5e-08 Score=93.53 Aligned_cols=133 Identities=17% Similarity=0.200 Sum_probs=93.1
Q ss_pred EecEEEEecCCCCCCCCchHHHHHH---------HHHH---------HHH--HhcCCeEEEEcCchhHHHHHHHHhhhCC
Q 017664 104 VYDYVVVATGHVESVPKSRTERLSQ---------YEKD---------FEK--VKSANSVLIVGGGPTGVELAGEIAVDFP 163 (368)
Q Consensus 104 ~~d~lvlAtG~~~~~p~~~~~~~~~---------~~~~---------~~~--~~~~~~v~VvG~g~~~~e~a~~l~~~~~ 163 (368)
.||.+++++|.+|..|++....+.. .... ... .....+|+|||+|++|+.+|..|.+ .
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~--~ 114 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELAL--L 114 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH--T
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHH--C
Confidence 3678999999998776543322211 1111 000 1235789999999999999999986 4
Q ss_pred CCeEEEEecCcccccc-----c----------------------------CchhHHHHHHHHHcCCcEEEecceeeeccc
Q 017664 164 DKKVILVHRGPKLLEF-----V----------------------------GSRASQIALDWLTSKKVEVILNQSVTLNTI 210 (368)
Q Consensus 164 ~~~v~~i~~~~~~l~~-----~----------------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~ 210 (368)
+.+|+++++.+.+... . ...+...+.+.+++.|+++++++.|.+++.
T Consensus 115 G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~ 194 (497)
T 2bry_A 115 GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQP 194 (497)
T ss_dssp TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEC
T ss_pred CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE
Confidence 8899999987643110 0 034556677788889999999999998876
Q ss_pred C---C-C-eEEc--C-CC--cEEecCEEEEccCCCCCc
Q 017664 211 S---D-G-LIET--S-SG--ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 211 ~---~-~-~v~~--~-~g--~~i~~d~vi~a~G~~p~~ 238 (368)
+ + . .+.+ . +| +++++|.||.|+|..+..
T Consensus 195 ~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 195 PPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp CCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 4 1 2 5555 4 66 579999999999987643
No 140
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.62 E-value=2.5e-08 Score=87.07 Aligned_cols=38 Identities=21% Similarity=0.214 Sum_probs=34.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEIT 53 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~ 53 (368)
.+||+|||||||||+||..|+ +|++|+|+|+++..|+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 479999999999999999998 49999999999877643
No 141
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.61 E-value=5.2e-07 Score=85.01 Aligned_cols=52 Identities=15% Similarity=0.112 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeeccc---------------CCC---eEEcCCCcEE--ecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTI---------------SDG---LIETSSGETI--DTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~---------------~~~---~v~~~~g~~i--~~d~vi~a~G~~ 235 (368)
.+...+.+.+++.|++++++++|++++. +++ .+.+.+| ++ .+|.||+|+|..
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 6778888999999999999999998876 443 4677777 58 999999999965
No 142
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.60 E-value=2e-07 Score=94.74 Aligned_cols=53 Identities=28% Similarity=0.272 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|++++.+++ .+.+.+| ++.+|.||+|+|..
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFW 206 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccc
Confidence 36778888899999999999999999987655 4677777 79999999999976
No 143
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.60 E-value=6.1e-08 Score=91.16 Aligned_cols=100 Identities=20% Similarity=0.208 Sum_probs=77.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhh-CCCCeEEEEecCcccc--cc---------cCchhHHHHHHHHHcCCcEEEecceeee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVD-FPDKKVILVHRGPKLL--EF---------VGSRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~-~~~~~v~~i~~~~~~l--~~---------~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
++|+|||+|+.|+.+|..|.++ ..+.+|+++++++.+. +. ...++...+.+.+++.||+++. ..++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 6899999999999999999862 2578999999987642 11 0111222245778889999985 58888
Q ss_pred cccCCCeEEcCCCcEEecCEEEEccCCCCCchh
Q 017664 208 NTISDGLIETSSGETIDTDCHFMCTGKAMASSW 240 (368)
Q Consensus 208 i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~ 240 (368)
++.++..+.+++|+++.+|.+|+|+|.+|+.+.
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGG
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCccc
Confidence 887777899999999999999999999887543
No 144
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.58 E-value=1.7e-07 Score=88.47 Aligned_cols=54 Identities=19% Similarity=0.099 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCCe---EEcC---CCc--EEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDGL---IETS---SGE--TIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---v~~~---~g~--~i~~d~vi~a~G~~p 236 (368)
.+.+.+.+.+++.|++++.+++|+.+..+++. +.+. +|+ ++++|.||.|+|...
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 45667777888899999999999988776552 4443 675 799999999999643
No 145
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.58 E-value=7.7e-08 Score=92.36 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC-----eEEcCCCc--EEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG-----LIETSSGE--TIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-----~v~~~~g~--~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+++|+.+..+++ .+...+|+ ++++|.||.|+|...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 4566777888889999999999999887665 23445674 899999999999853
No 146
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.58 E-value=1.7e-07 Score=82.87 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHhh-c-CCcEEEEcCCCcee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-S-FADVVLIDEKEYFE 51 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~-g~~v~lie~~~~~~ 51 (368)
.++||+|||||++|+++|..|+ + |.+|+|+|+++..+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~g 76 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPG 76 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCC
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCC
Confidence 4579999999999999999997 4 89999999998654
No 147
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.57 E-value=2.7e-07 Score=89.38 Aligned_cols=53 Identities=21% Similarity=0.280 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHcC-CcEEEecceeeecccCC-C---eEEcCCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSK-KVEVILNQSVTLNTISD-G---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++. |++++.+ +|+.+..++ + .+.+.+|+++++|.||.|+|...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 5677788888888 9999999 899887643 3 57788888899999999999754
No 148
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.56 E-value=7.2e-08 Score=89.83 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=77.1
Q ss_pred CeEEEEcCchhHHHHHHHHhh-hCCCCeEEEEecCccccc-----------ccCchhHHHHHHHHHcCCcEEEecceeee
Q 017664 140 NSVLIVGGGPTGVELAGEIAV-DFPDKKVILVHRGPKLLE-----------FVGSRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~-~~~~~~v~~i~~~~~~l~-----------~~~~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
++|+|||+|++|+.+|..|.+ ...+.+|+++++++.+.. ....++...+.+.+++.|++++.+ .++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 579999999999999999986 335789999998875421 112244455677888899999987 8888
Q ss_pred cccCCCeEEcCCCc----EEecCEEEEccCCCCCch
Q 017664 208 NTISDGLIETSSGE----TIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 208 i~~~~~~v~~~~g~----~i~~d~vi~a~G~~p~~~ 239 (368)
++.++..+.+.+++ ++++|.+|+|+|.+|+.+
T Consensus 81 i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 87776677776665 499999999999987654
No 149
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.56 E-value=3.7e-07 Score=85.06 Aligned_cols=98 Identities=20% Similarity=0.362 Sum_probs=76.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhH-------------HHHHHHHHcCCcEEEecceee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRAS-------------QIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~-------------~~~~~~l~~~gv~i~~~~~v~ 206 (368)
++++|||+|+.|+.+|..|.++....+|+++++.+.+. ...+.+. ....+.+++.|++++.++++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-YDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-BCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-cCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEE
Confidence 58999999999999999999754445699999876532 1111111 122356778899999999999
Q ss_pred ecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 207 LNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..+...+.+.+|+++.+|.+|+|||..|..
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~ 113 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGSRART 113 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCCcccC
Confidence 98877778999999999999999999987654
No 150
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.53 E-value=6.2e-07 Score=87.13 Aligned_cols=55 Identities=13% Similarity=0.048 Sum_probs=43.5
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEc--CCCc--EEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIET--SSGE--TIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~--~~g~--~i~~d~vi~a~G~~p 236 (368)
..+...+.+.+++.||+++++++++++..++ + .+++ .+|+ ++.+|.||+|+|-..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 3566778888899999999999999987666 5 3444 3675 689999999999654
No 151
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.52 E-value=7.7e-08 Score=90.26 Aligned_cols=99 Identities=22% Similarity=0.258 Sum_probs=76.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------cCchhHHHHHHHHHcCCcEEEecceeeec
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-----------VGSRASQIALDWLTSKKVEVILNQSVTLN 208 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-----------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 208 (368)
++|+|||+|+.|+.+|..|.+...+.+|+++++++.+... ...++...+.+.+++.|++++.+ .++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 6899999999999999999874367899999998764210 01122222345667789999975 78888
Q ss_pred ccCCCeEEcCCCcEEecCEEEEccCCCCCch
Q 017664 209 TISDGLIETSSGETIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 209 ~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 239 (368)
+.++..+.+++++++.+|.+|+|+|.+|+.+
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 8776688899998999999999999987644
No 152
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.52 E-value=1e-06 Score=85.66 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=43.1
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEcC--CCc--EEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIETS--SGE--TIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~~--~g~--~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.||+++++++++++..++ + .++.. +|+ ++.+|.||+|+|..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 4567788888999999999999999987665 4 24433 675 68999999999964
No 153
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.52 E-value=3.6e-07 Score=87.36 Aligned_cols=53 Identities=17% Similarity=0.188 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCc---EEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGE---TIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~---~i~~d~vi~a~G~~ 235 (368)
.+.+.+.+.+++.|++++.+++++.++.+++ .+.+.+++ ++++|+||.|.|..
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 5567777888888999999999999987665 55566654 79999999999975
No 154
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.51 E-value=3.6e-07 Score=81.87 Aligned_cols=96 Identities=19% Similarity=0.140 Sum_probs=75.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC--cccc--------ccc----CchhHHHHHHHHHcCCcEEEeccee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRG--PKLL--------EFV----GSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~--~~~l--------~~~----~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
.+|+|||+|+.|+.+|..|.+ .+.+|+++++. .... +.+ ..++.+.+.+.+++.|++++. +.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 92 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSAR--YMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIV 92 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCE
T ss_pred cCEEEECccHHHHHHHHHHHH--CCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 589999999999999999986 37899999986 1110 111 235666777888899999999 888
Q ss_pred eecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..+++ .+.+.+|+++.+|.+|+|+|..|..
T Consensus 93 ~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 93 EKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRK 127 (323)
T ss_dssp EEEEEC--CEEEEESSSCEEEEEEEEECCCCEECC
T ss_pred EEEEecCCEEEEEECCCCEEEcCEEEECcCCCCcc
Confidence 88877655 6788888899999999999988654
No 155
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.51 E-value=2.1e-07 Score=83.84 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=77.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------------ccc----CchhHHHHHHHHHcCCcEEE
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------------EFV----GSRASQIALDWLTSKKVEVI 200 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------------~~~----~~~~~~~~~~~l~~~gv~i~ 200 (368)
.+|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. +.+ ..++...+.+.+++.|++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGM--RQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC 85 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHH--CCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE
Confidence 579999999999999999986 478999999876432 111 24566777788888999999
Q ss_pred ecceeeecccCCC---eEEcCCCcEEecCEEEEccCC---CCC
Q 017664 201 LNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGK---AMA 237 (368)
Q Consensus 201 ~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~---~p~ 237 (368)
+++.|..+..+++ .+.+.+|+ +.+|.+|+|+|. .|.
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred ccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 9999999887654 77888886 999999999998 554
No 156
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.51 E-value=2.5e-07 Score=85.81 Aligned_cols=36 Identities=31% Similarity=0.425 Sum_probs=32.5
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
++++||+|||||++|+++|..|++ |.+|+|+|+.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 456899999999999999999985 999999999864
No 157
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=4e-07 Score=85.36 Aligned_cols=100 Identities=20% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---ccCc----------hhHHHHHHHHHcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---FVGS----------RASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---~~~~----------~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
..+++|||+|+.|+.+|..|.+.....+|+++++.+.+.. .... .+.....+.+++.|++++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999987433348999998754210 0010 11112246678899999999999
Q ss_pred eecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..++..+.+.+|+++++|.+|+|||.+|..
T Consensus 84 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 84 TAINRDRQQVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred EEEECCCCEEEECCCCEEECCEEEEcCCCCccC
Confidence 988876668888889899999999999988754
No 158
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.51 E-value=6.4e-07 Score=85.56 Aligned_cols=53 Identities=15% Similarity=0.321 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCc---EEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGE---TIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~---~i~~d~vi~a~G~~ 235 (368)
.+...+.+.+++.|++++.+++++.++.+++ .+.+.+++ ++++|+||.|.|..
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 5567777888888999999999999987665 56666664 79999999999975
No 159
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.50 E-value=1.2e-07 Score=90.47 Aligned_cols=39 Identities=28% Similarity=0.378 Sum_probs=34.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCcee
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFE 51 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~ 51 (368)
....+||+|||||++|+++|..|+ .|.+|+|||+++.++
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g 128 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS 128 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC
Confidence 345789999999999999999998 599999999998764
No 160
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.49 E-value=4.7e-07 Score=82.22 Aligned_cols=93 Identities=10% Similarity=0.043 Sum_probs=75.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------------------cccC-----------chhHHH
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------------------EFVG-----------SRASQI 187 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------------------~~~~-----------~~~~~~ 187 (368)
.+++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. +.+. ..+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~--~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRR--SGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--SSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 479999999999999999986 478999999876421 1000 356677
Q ss_pred HHHHHHcCCcEEEecceeeecccCCC--e-EEcCCCcEEecCEEEEccCCC
Q 017664 188 ALDWLTSKKVEVILNQSVTLNTISDG--L-IETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 188 ~~~~l~~~gv~i~~~~~v~~i~~~~~--~-v~~~~g~~i~~d~vi~a~G~~ 235 (368)
+.+.+++.|++++.+++|..++.+++ . +.+++| ++++|.+|+|+|..
T Consensus 82 l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 82 LAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 78888899999999999999887766 4 888888 89999999999953
No 161
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.47 E-value=2.1e-07 Score=89.28 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccC-CC---eEEcC-CCc--EEecC-EEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTIS-DG---LIETS-SGE--TIDTD-CHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~-~~---~v~~~-~g~--~i~~d-~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++++++++++..+ ++ .|+.. +++ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 67788888999999999999999998876 44 34433 332 68896 9999999653
No 162
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.46 E-value=1.9e-07 Score=90.60 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEc--CCC-cEEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIET--SSG-ETIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~--~~g-~~i~~d~vi~a~G~~ 235 (368)
.+...+.+.+++.|++++.+++|+.++.+++ .+.+ .+| +++.+|+||.|.|..
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 5567777888888999999999999987765 5555 678 789999999999965
No 163
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.44 E-value=4e-07 Score=84.63 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=75.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---cc----------CchhHHHHHHHHHcCCcEEEecceee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---FV----------GSRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---~~----------~~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
++++|||+|+.|+.+|..|+++....+|+++++.+.... .+ ...+.....+.+++.+++++. +++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999997544448999998763210 00 112223345677889999999 8999
Q ss_pred ecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 207 LNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..++..+.+.+|+++.+|.+|+|||.+|..
T Consensus 81 ~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDREGRKLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEETTTTEEEESSSCEEECSEEEECCCEEECC
T ss_pred EEECCCCEEEECCCCEEECCEEEEeeCCCccC
Confidence 88877778999999999999999999987653
No 164
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.44 E-value=3.4e-07 Score=88.68 Aligned_cols=54 Identities=11% Similarity=0.015 Sum_probs=43.2
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCC---C--cEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSS---G--ETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~---g--~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|+.+..+++ .+.+.+ | .++.+|.||.|+|..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 46677788888999999999999999887665 355432 3 479999999999965
No 165
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.44 E-value=8.4e-07 Score=82.57 Aligned_cols=99 Identities=17% Similarity=0.179 Sum_probs=74.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHH----------HHHHcCCcEEEecceeeec
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIAL----------DWLTSKKVEVILNQSVTLN 208 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~----------~~l~~~gv~i~~~~~v~~i 208 (368)
..+++|||+|+.|+.+|..|.+.....+|+++++.+.+. ...+.+...+. +.+++.|++++.++.+..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 85 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-YDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSF 85 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-BCSGGGGTHHHHHCCGGGSBCCCTTSCSCEEEETCCEEEE
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-ccCCCCCHHHhCCCchhhhhHHHHHHCCCEEEcCCEEEEE
Confidence 468999999999999999999764445799999876532 11111111111 1456789999999999988
Q ss_pred ccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 209 TISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 209 ~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..++..+.+.+|+++++|.+|+|||.+|..
T Consensus 86 ~~~~~~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 86 DPQAHTVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred ECCCCEEEECCCCEEECCEEEECCCCCCCC
Confidence 876668888889899999999999987654
No 166
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.44 E-value=4.8e-07 Score=84.40 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=77.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---c----------cCchhHHHHHHHHHcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---F----------VGSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---~----------~~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
..+++|||+|+.|+.+|..|+++....+|+++++.+.+.. . ....+.....+.+++.|++++.++.+
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 88 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEV 88 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCCE
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCEE
Confidence 4689999999999999999997544446999998764211 0 01122223456778899999999999
Q ss_pred eecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..++..+.+.+|+++.+|.+|+|||..|..
T Consensus 89 ~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~ 121 (415)
T 3lxd_A 89 VSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRR 121 (415)
T ss_dssp EEEETTTTEEEETTSCEEEEEEEEECCCEECCC
T ss_pred EEEECCCCEEEECCCCEEEeeEEEEccCCccCC
Confidence 988877778999999999999999999987654
No 167
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.44 E-value=2.9e-07 Score=88.84 Aligned_cols=54 Identities=7% Similarity=-0.007 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC------eEEcCCC---cEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG------LIETSSG---ETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~------~v~~~~g---~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++++++++.++.+++ .+.+.++ .++.+|+||.|.|...
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 5667788888889999999999999876543 4555555 6899999999999753
No 168
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.43 E-value=4.5e-07 Score=85.51 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=72.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------ccc------CchhHHHHHHHH-HcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------EFV------GSRASQIALDWL-TSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------~~~------~~~~~~~~~~~l-~~~gv~i~~~~~v 205 (368)
.++++|||+|+.|+.+|..|++..++.+|+++++.+.+. +.. ...+.....+.+ ++.|++++.++.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 468999999999999999999866688999999887431 110 111112222333 6789999999999
Q ss_pred eecccCCCeEEcCCC-cEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSG-ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g-~~i~~d~vi~a~G~~p~~ 238 (368)
..+..++..+.+.++ .++.+|.+|+|||.+|..
T Consensus 83 ~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~ 116 (449)
T 3kd9_A 83 IEVDTGYVRVRENGGEKSYEWDYLVFANGASPQV 116 (449)
T ss_dssp EEECSSEEEEECSSSEEEEECSEEEECCCEEECC
T ss_pred EEEecCCCEEEECCceEEEEcCEEEECCCCCCCC
Confidence 888765557778777 489999999999987754
No 169
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=4.3e-07 Score=83.27 Aligned_cols=97 Identities=24% Similarity=0.427 Sum_probs=72.4
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-----------ccC-chhHHHHHHHHHcCCcEEEeccee
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-----------FVG-SRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~-----------~~~-~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
.+.+++|||+|+.|+.+|..+++ .+ +|+++++++.... ..+ .++.....+.+++.|++++.++.+
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~--~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQ--TY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTT--TS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCE
T ss_pred CCCcEEEECCcHHHHHHHHHHhh--cC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEE
Confidence 47789999999999999999975 35 9999998764211 001 112222346677889999999998
Q ss_pred eecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..+...+. .+|+++++|.+|+|||.+|..
T Consensus 84 ~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~ 115 (367)
T 1xhc_A 84 KLIDRGRKVVI-TEKGEVPYDTLVLATGARARE 115 (367)
T ss_dssp EEEETTTTEEE-ESSCEEECSEEEECCCEEECC
T ss_pred EEEECCCCEEE-ECCcEEECCEEEECCCCCCCC
Confidence 88876655676 677889999999999988764
No 170
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.39 E-value=8.1e-07 Score=80.10 Aligned_cols=98 Identities=24% Similarity=0.223 Sum_probs=75.8
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc----cc------------cccc-----CchhHHHHHHHHHcCC
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP----KL------------LEFV-----GSRASQIALDWLTSKK 196 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~----~~------------l~~~-----~~~~~~~~~~~l~~~g 196 (368)
..++|+|||+|+.|+.+|..|.+ .+.+|+++++.+ .. .+.+ ..++...+.+.+++.|
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~--~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLAR--AEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999996 378999999843 11 1111 2356677888889999
Q ss_pred cEEEecceeeecccCCC--eEEc---CCCcEEecCEEEEccCCCCCc
Q 017664 197 VEVILNQSVTLNTISDG--LIET---SSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 197 v~i~~~~~v~~i~~~~~--~v~~---~~g~~i~~d~vi~a~G~~p~~ 238 (368)
++++.++ +..+..+++ .+.+ .++.++.+|.+|+|+|..|..
T Consensus 99 v~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 99 TEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp CEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred CEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 9999988 888877665 3444 466789999999999987654
No 171
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.39 E-value=1.4e-06 Score=83.22 Aligned_cols=54 Identities=19% Similarity=0.220 Sum_probs=43.8
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEc---CCCc--EEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIET---SSGE--TIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~---~~g~--~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++++++|+++..+++ .+.+ .+|+ ++.+|.||.|+|..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 45677788888999999999999998876555 5655 3565 79999999999976
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.39 E-value=9.5e-07 Score=79.71 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=74.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------------ccc----CchhHHHHHHHHHcCCcEEE
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------------EFV----GSRASQIALDWLTSKKVEVI 200 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------------~~~----~~~~~~~~~~~l~~~gv~i~ 200 (368)
.+++|||+|+.|+.+|..|.+ .+.+|+++++.+.+. +.+ ..++...+.+.+++.+++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGM--RGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 579999999999999999985 478999999876431 011 13455667777888899999
Q ss_pred ecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 201 LNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 201 ~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.++.|..++.+++ .+.+.+|+++.+|.+|+|+|..
T Consensus 84 ~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 84 LGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp ESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred eCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 9999998876654 5777888889999999999984
No 173
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.39 E-value=4.6e-06 Score=81.02 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=42.7
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEcC--CCc--EEecCEEEEccCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIETS--SGE--TIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~~--~g~--~i~~d~vi~a~G~~p 236 (368)
..+...+.+.+++.||+++++++++++..++ + ++... +|+ ++.+|.||+|+|..+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 3566778888999999999999999987655 4 34443 664 689999999999654
No 174
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.38 E-value=1.2e-06 Score=77.40 Aligned_cols=96 Identities=19% Similarity=0.177 Sum_probs=73.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------ccc----CchhHHHHHHHHHcC-CcEEEeccee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------EFV----GSRASQIALDWLTSK-KVEVILNQSV 205 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~~~----~~~~~~~~~~~l~~~-gv~i~~~~~v 205 (368)
.+++|||+|+.|+.+|..|.+ .+.+|+++++++... +.. ..++...+.+.+++. +++++.. ++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGR--ARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CE
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EE
Confidence 479999999999999999986 378999999753211 111 124556677777776 7888754 78
Q ss_pred eecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..+++ .+.+.+|+++.+|.+|+|+|..|..
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCC
Confidence 88876654 7888899899999999999987654
No 175
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.37 E-value=1.4e-06 Score=79.45 Aligned_cols=95 Identities=21% Similarity=0.267 Sum_probs=76.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc-------c--------cc----CchhHHHHHHHHHcCCcEE
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL-------E--------FV----GSRASQIALDWLTSKKVEV 199 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l-------~--------~~----~~~~~~~~~~~l~~~gv~i 199 (368)
..+|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+. + .+ ...+.+.+.+.+++.++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM--NNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 4689999999999999999985 478999999875431 1 11 1355666778888899999
Q ss_pred EecceeeecccCCC---eEEcCCCcEEecCEEEEccCCC
Q 017664 200 ILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 200 ~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
+.++.|..+..+++ .+.+.+|+++.+|.+|+|+|..
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred EcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 99999998876543 6788888899999999999984
No 176
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.37 E-value=6.1e-07 Score=84.68 Aligned_cols=99 Identities=19% Similarity=0.272 Sum_probs=74.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--c-c----cCc------hhHHHHHHHHHcCCcEEEecceee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--E-F----VGS------RASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--~-~----~~~------~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
++++|||+|+.|+.+|..|+++.++.+|+++++++.+. + . ... .+.....+.+++.|++++.++.|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 58999999999999999999876789999999887542 1 0 000 111113467788999999999999
Q ss_pred ecccCCCeEEc---CCCcEEecCEEEEccCCCCCc
Q 017664 207 LNTISDGLIET---SSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~~~v~~---~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..+++.+.+ .+++++.+|.+|+|||.+|..
T Consensus 83 ~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~ 117 (452)
T 3oc4_A 83 AMDVENQLIAWTRKEEQQWYSYDKLILATGASQFS 117 (452)
T ss_dssp EEETTTTEEEEEETTEEEEEECSEEEECCCCCBCC
T ss_pred EEECCCCEEEEEecCceEEEEcCEEEECCCcccCC
Confidence 98877765443 356689999999999998764
No 177
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.34 E-value=1e-06 Score=81.76 Aligned_cols=33 Identities=27% Similarity=0.458 Sum_probs=30.2
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
.+|+||||||+||++|..|+ +|++|+|+||.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 58999999999999999998 4999999998764
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.33 E-value=2.2e-06 Score=76.43 Aligned_cols=95 Identities=19% Similarity=0.212 Sum_probs=73.3
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCcc-----------ccccc-----CchhHHHHHHHHHcCCcEEEecc
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDK-KVILVHRGPK-----------LLEFV-----GSRASQIALDWLTSKKVEVILNQ 203 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~-~v~~i~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~gv~i~~~~ 203 (368)
+++|||+|+.|+.+|..+.+ .+. +|+++++... ..+.+ ...+.+.+.+.+++.|++++. +
T Consensus 3 dvvIIG~G~aGl~aA~~l~~--~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~ 79 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATR--GGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-T 79 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-S
T ss_pred eEEEECccHHHHHHHHHHHH--CCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-E
Confidence 68999999999999999986 377 9999998521 01111 134566677788889999998 7
Q ss_pred eeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 204 SVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 204 ~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
++..+..+++ .+.+.+|+++++|.+|+|+|..|..
T Consensus 80 ~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 80 AVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 7887776655 6767888899999999999977643
No 179
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.32 E-value=2e-06 Score=76.66 Aligned_cols=96 Identities=26% Similarity=0.242 Sum_probs=73.6
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc--ccc--------cc----cCchhHHHHHHHHHcCCcEEEecceee
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP--KLL--------EF----VGSRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~--~~l--------~~----~~~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
+++|||+|+.|+.+|..+.+ .+.+|+++++.. ... .. ..+.+...+.+.+++.|++++.++++.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~--~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~ 80 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSAR--KGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSAS 80 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHT--TTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEE
Confidence 68999999999999999985 478999997531 110 00 113556677788889999999999998
Q ss_pred ecccCC----C-eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 207 LNTISD----G-LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~----~-~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..+. . .+.+.+|+++++|.+|+|+|..|..
T Consensus 81 ~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 81 KLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 886531 2 6778888899999999999987643
No 180
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.32 E-value=1.1e-06 Score=83.35 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=65.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------cc-c------Cchh-------HHHHHHHHHcCCcE
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------EF-V------GSRA-------SQIALDWLTSKKVE 198 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------~~-~------~~~~-------~~~~~~~l~~~gv~ 198 (368)
.++|+|||+|+.|+.+|..|+++.++.+|+++++++.+. +. . ...+ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 368999999999999999999876789999999987631 11 0 0111 11222233358999
Q ss_pred EEecceeeecccCCCeEEcC---CCc--EEecCEEEEccCCCCCc
Q 017664 199 VILNQSVTLNTISDGLIETS---SGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 199 i~~~~~v~~i~~~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~ 238 (368)
++.++.+..++.++..+.+. +|+ ++.+|.+|+|||.+|..
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 127 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANR 127 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCC
Confidence 99999999988777755443 365 89999999999987654
No 181
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.28 E-value=1.1e-06 Score=85.28 Aligned_cols=99 Identities=20% Similarity=0.265 Sum_probs=73.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------cc-----cC--c-hhHHHHHHHHHcCCcEEEeccee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------EF-----VG--S-RASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------~~-----~~--~-~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
++|+|||+|+.|+.+|..|.++.++.+|+++++.+.+. +. .. . .+........++.|++++.+++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 58999999999999999999876688999999987631 10 00 0 11222334445589999999999
Q ss_pred eecccCCCeEEcC---CCc--EEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETS---SGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~ 238 (368)
..+..+++.+.+. +|+ ++.+|.+|+|||.+|..
T Consensus 82 ~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 119 (565)
T 3ntd_A 82 VAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIV 119 (565)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCC
Confidence 9998777644433 354 79999999999987654
No 182
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.28 E-value=5.8e-07 Score=84.84 Aligned_cols=55 Identities=9% Similarity=-0.109 Sum_probs=45.7
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccC--CC---eEEcCCCcEEecCEEEEccCCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTIS--DG---LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
..+.+.+.+.+++.|++++++++|++|..+ ++ .|.+ +|+++.+|.||+++|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 478888899999999999999999998766 55 4555 5788999999999997753
No 183
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.27 E-value=2.1e-06 Score=83.82 Aligned_cols=101 Identities=15% Similarity=0.206 Sum_probs=77.5
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------c-----cc---CchhHHHHHHHHHcCCcEEEecc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------E-----FV---GSRASQIALDWLTSKKVEVILNQ 203 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------~-----~~---~~~~~~~~~~~l~~~gv~i~~~~ 203 (368)
..++|+|||+|+.|+.+|..|.++.++.+|+++++++.+. + .. ...+...+....++.|++++.++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 3578999999999999999999876789999999987631 0 00 11133445566678899999999
Q ss_pred eeeecccCCCeEEc---CCCc--EEecCEEEEccCCCCCc
Q 017664 204 SVTLNTISDGLIET---SSGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 204 ~v~~i~~~~~~v~~---~~g~--~i~~d~vi~a~G~~p~~ 238 (368)
.|..+..+++.+.+ .+|+ ++.+|.+|+|||.+|..
T Consensus 115 ~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (588)
T 3ics_A 115 EVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIV 154 (588)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCC
Confidence 99998877775443 3565 78999999999987654
No 184
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.26 E-value=1e-06 Score=83.10 Aligned_cols=98 Identities=18% Similarity=0.139 Sum_probs=73.1
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc----------c-cc----CchhHHHHHHHHHcCCcEEEeccee
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL----------E-FV----GSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l----------~-~~----~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
+++|||+|+.|+.+|..+++..++.+|+++++.+.+. . .. ...+.....+.+++.|++++.++.+
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 81 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRHQV 81 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESEEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCCEE
Confidence 6999999999999999999765689999999887421 0 00 1112222346677899999999999
Q ss_pred eecccCCCeEEcCC-----CcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSS-----GETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~-----g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..+++.+.+.+ ++++++|.+|+|||.+|..
T Consensus 82 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~ 119 (452)
T 2cdu_A 82 TNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTV 119 (452)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCC
Confidence 88876655555432 4679999999999988754
No 185
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.25 E-value=1.9e-06 Score=83.20 Aligned_cols=97 Identities=11% Similarity=0.153 Sum_probs=76.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------------------c----------------cC
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---------------------F----------------VG 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---------------------~----------------~~ 181 (368)
..+|+|||+|++|+.+|..|.+ .+.+|+++++++.+.. . ..
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~--~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRS--QGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCEEEECchHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 3579999999999999999986 5789999998653210 0 01
Q ss_pred chhHHHHHHHHHcCCc--EEEecceeeecccCCC----eEEcCCCcEEecCEEEEccC--CCCC
Q 017664 182 SRASQIALDWLTSKKV--EVILNQSVTLNTISDG----LIETSSGETIDTDCHFMCTG--KAMA 237 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~----~v~~~~g~~i~~d~vi~a~G--~~p~ 237 (368)
+++.+.+.+.+++.++ +++++++|+.++.+++ .|.+.+|+++.+|.+|+|+| ..|.
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred HHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 2455667777888888 8999999998876544 78899999999999999999 4444
No 186
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.25 E-value=4.8e-06 Score=74.75 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=73.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-----------ccccc-----CchhHHHHHHHHHcCCcEEEec
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-----------LLEFV-----GSRASQIALDWLTSKKVEVILN 202 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~gv~i~~~ 202 (368)
..+++|||+|+.|+.+|..+.+ .+.+|+++++... ..+.+ ...+...+.+.+++.|++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~- 84 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGR--AQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM- 84 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-
T ss_pred cCCEEEECCCHHHHHHHHHHHH--cCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-
Confidence 3579999999999999999986 4789999998721 01111 124556677788889999987
Q ss_pred ceeeecccC--CC---eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 203 QSVTLNTIS--DG---LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 203 ~~v~~i~~~--~~---~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..+..+ ++ .+.+.+|+++.+|.+|+|+|..|..
T Consensus 85 ~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 85 DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 577777655 32 5667788899999999999987653
No 187
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.23 E-value=3.4e-06 Score=81.27 Aligned_cols=94 Identities=12% Similarity=0.083 Sum_probs=74.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc--------c-------------c----------------Cc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE--------F-------------V----------------GS 182 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~--------~-------------~----------------~~ 182 (368)
.+|+|||+|++|+.+|..|.++ .+.+|+++++++.+.. . + .+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 5799999999999999999832 5789999998653210 0 0 12
Q ss_pred hhHHHHHHHHHcCCc--EEEecceeeecccCCC----eEEcCCCcEEecCEEEEccCC
Q 017664 183 RASQIALDWLTSKKV--EVILNQSVTLNTISDG----LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~----~v~~~~g~~i~~d~vi~a~G~ 234 (368)
++.+.+.+.+++.|+ +++++++|..++.+++ .|.+.+|+++.+|.+|+|+|.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 455667777888898 8999999998876544 788899999999999999994
No 188
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.23 E-value=2.4e-06 Score=80.42 Aligned_cols=99 Identities=19% Similarity=0.229 Sum_probs=73.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--c---------cc--CchhHHHHHHHHHcCCcEEEecceee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--E---------FV--GSRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--~---------~~--~~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
++++|||+|+.|+.+|..+++..++.+|+++++++.+. + .. ..++.....+.+++.|++++.++.+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 80 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEIT 80 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 36999999999999999999765689999999886431 0 00 11222233466778899999999998
Q ss_pred ecccCCCeEEcC---CCc--EEecCEEEEccCCCCCc
Q 017664 207 LNTISDGLIETS---SGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~ 238 (368)
.+..+++.+.+. +|+ ++.+|.+|+|||.+|..
T Consensus 81 ~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 117 (447)
T 1nhp_A 81 AIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFE 117 (447)
T ss_dssp EEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCC
Confidence 887766655553 365 48999999999988754
No 189
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.22 E-value=5.6e-06 Score=76.71 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=73.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--------------c---c-----------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--------------E---F----------------------- 179 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--------------~---~----------------------- 179 (368)
.+|+|||+|++|+.+|..+++ .+.+|+++++.+.+. . .
T Consensus 5 ~dViIIGgG~aGl~aA~~la~--~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK--LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHh--CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 479999999999999999986 478999999875320 0 0
Q ss_pred ------------------------cCchhHHHHHHHHHcCCcEEEecceeeecccC----CC--eEEcCCCcEEecCEEE
Q 017664 180 ------------------------VGSRASQIALDWLTSKKVEVILNQSVTLNTIS----DG--LIETSSGETIDTDCHF 229 (368)
Q Consensus 180 ------------------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~----~~--~v~~~~g~~i~~d~vi 229 (368)
....+.+.+.+.+++.|+++++++.++.+..+ ++ .+.+.+| ++++|.||
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VV 161 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLI 161 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEE
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEE
Confidence 11233455677788899999999999988755 33 5667766 79999999
Q ss_pred EccCCCCC
Q 017664 230 MCTGKAMA 237 (368)
Q Consensus 230 ~a~G~~p~ 237 (368)
+|+|..+.
T Consensus 162 lAtG~~s~ 169 (401)
T 2gqf_A 162 VATGGLSM 169 (401)
T ss_dssp ECCCCSSC
T ss_pred ECCCCccC
Confidence 99998863
No 190
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.22 E-value=6.2e-06 Score=75.31 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=71.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCc------c------c-cc-------cc------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDK-KVILVHRGP------K------L-LE-------FV------------------ 180 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~-~v~~i~~~~------~------~-l~-------~~------------------ 180 (368)
.+|+|||+|++|+.+|..|.+ .+. +|+++++++ . . .+ .+
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~--~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKD--FGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred CcEEEECcCHHHHHHHHHHHH--cCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 479999999999999999986 366 899999874 0 0 00 00
Q ss_pred ---C-chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCC
Q 017664 181 ---G-SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 181 ---~-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
. ..+...+.+.+++.|++++.++.|..+..+++ .+.+.++ ++.+|.+|+|+|..+.
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 0 12344556677889999999999998876644 6777777 5999999999998754
No 191
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.21 E-value=5e-06 Score=74.87 Aligned_cols=96 Identities=18% Similarity=0.124 Sum_probs=73.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEec----Cccc------------cccc-----CchhHHHHHHHHHcCCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHR----GPKL------------LEFV-----GSRASQIALDWLTSKKV 197 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~----~~~~------------l~~~-----~~~~~~~~~~~l~~~gv 197 (368)
..+++|||+|+.|+.+|..|.+ .+.+|+++++ .... .+.+ ...+...+.+.+++.|+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~--~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAAR--AELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 3579999999999999999986 3789999987 2211 1111 12456667778888999
Q ss_pred EEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 198 EVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 198 ~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+++.++ +..+..+++ .+.+ +|+++.+|.+|+|+|..|..
T Consensus 86 ~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 86 TIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp EEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred EEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 999987 877776554 6777 77889999999999987653
No 192
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.21 E-value=4.6e-06 Score=74.21 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=65.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc------ccc-------cCchhHHHHHHHHHcCC-cEEEeccee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL------LEF-------VGSRASQIALDWLTSKK-VEVILNQSV 205 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~------l~~-------~~~~~~~~~~~~l~~~g-v~i~~~~~v 205 (368)
-.|+|||+|+.|+.+|..+++ .+.+|+++++...- .+. ..+++.+...+.+.+.+ +.++....+
T Consensus 7 yDVvIIGaGpAGlsAA~~lar--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGR--ARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVV 84 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEE
T ss_pred cCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEE
Confidence 369999999999999988875 47899999975310 010 11234444555555554 555544443
Q ss_pred eecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.....+++ .+.+.+|+++++|.+|+|||.+|..
T Consensus 85 ~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 85 MITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp EEEECTTSCEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred EeeecCCCcEEEEECCCCEEEeCEEEEccCCcccc
Confidence 33233333 7888999999999999999987653
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.20 E-value=1.7e-06 Score=82.48 Aligned_cols=100 Identities=20% Similarity=0.360 Sum_probs=73.5
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc---cCchh--------HHH--------------------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF---VGSRA--------SQI-------------------- 187 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~---~~~~~--------~~~-------------------- 187 (368)
..+++|||+|+.|+.+|..|.++.++.+|+++++.+.+... ....+ ...
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPSF 90 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGGG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchHh
Confidence 45799999999999999999876678899999988643100 00000 000
Q ss_pred HH-----HHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 188 AL-----DWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 188 ~~-----~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+. ..+++.||+++.++.+..+..++..|.+.+|+++.+|.+|+|||.+|..
T Consensus 91 ~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 91 YVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp SBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECC
T ss_pred hcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCC
Confidence 00 0012568999999999988776668889999999999999999988753
No 194
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.19 E-value=5.1e-06 Score=78.22 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=72.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCC--eEEEEecCccccc---cc---------------------------------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDK--KVILVHRGPKLLE---FV--------------------------------- 180 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~--~v~~i~~~~~~l~---~~--------------------------------- 180 (368)
..+|+|||+|++|+.+|..|.+ .+. +|+++++.+.+.. ..
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~--~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLA--EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHh--cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 5789999999999999999985 466 9999998753210 00
Q ss_pred ------------------------------CchhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC---Cc---E
Q 017664 181 ------------------------------GSRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS---GE---T 222 (368)
Q Consensus 181 ------------------------------~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~---g~---~ 222 (368)
...+.+.+.+.+++.+..++.+++|+.++.+++ .|.+.+ |+ +
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISK 163 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEE
T ss_pred hhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEE
Confidence 012344556666667788999999998876655 566554 66 7
Q ss_pred EecCEEEEccCC--CCCc
Q 017664 223 IDTDCHFMCTGK--AMAS 238 (368)
Q Consensus 223 i~~d~vi~a~G~--~p~~ 238 (368)
+.+|.||+|+|. .|..
T Consensus 164 ~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 164 DIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEESEEEECCCSSSSBCB
T ss_pred EEeCEEEECCCCCCCCCC
Confidence 999999999998 5543
No 195
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.19 E-value=1.4e-06 Score=81.79 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=70.4
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-----------cC---chhHHHHHHHHHcCCcEEEecceee
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-----------VG---SRASQIALDWLTSKKVEVILNQSVT 206 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-----------~~---~~~~~~~~~~l~~~gv~i~~~~~v~ 206 (368)
||+|||+|+.|+.+|..+++..+..+|+++++++..... .. ..+.....+.+++.+++++.+++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V~ 81 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVI 81 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEEETEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEEeCCeEE
Confidence 699999999999999999876556789999987643100 00 0011112355677899999999999
Q ss_pred ecccCCCeEEc-----CCCcEEecCEEEEccCCCCCc
Q 017664 207 LNTISDGLIET-----SSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 207 ~i~~~~~~v~~-----~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..+...+.+ .++.++.+|.+|+|||.+|..
T Consensus 82 ~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~ 118 (437)
T 4eqs_A 82 AINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS 118 (437)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC
T ss_pred EEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc
Confidence 88877663332 223478899999999998764
No 196
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.19 E-value=3.4e-06 Score=79.78 Aligned_cols=99 Identities=12% Similarity=0.162 Sum_probs=71.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC-CCCe---EEEEecCccccc-------------------------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDF-PDKK---VILVHRGPKLLE------------------------------------- 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~-~~~~---v~~i~~~~~~l~------------------------------------- 178 (368)
++|+|||+|++|+.+|..|.+.. .+.+ |+++++++.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 58999999999999999998511 3667 999998754210
Q ss_pred cc---------------CchhHHHHHHHHHcCCcE--EEecceeeecccCCC----eEEcCC---C--cEEecCEEEEcc
Q 017664 179 FV---------------GSRASQIALDWLTSKKVE--VILNQSVTLNTISDG----LIETSS---G--ETIDTDCHFMCT 232 (368)
Q Consensus 179 ~~---------------~~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~----~v~~~~---g--~~i~~d~vi~a~ 232 (368)
.+ ...+.+.+.+.+++.|++ +++++.|..++.+++ .|.+.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 00 023345566677778988 889999998876543 565544 4 578999999999
Q ss_pred C--CCCCc
Q 017664 233 G--KAMAS 238 (368)
Q Consensus 233 G--~~p~~ 238 (368)
| ..|..
T Consensus 163 G~~s~p~~ 170 (464)
T 2xve_A 163 GHFSTPYV 170 (464)
T ss_dssp CSSSSBCC
T ss_pred CCCCCCcc
Confidence 9 56654
No 197
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.18 E-value=1.3e-06 Score=79.88 Aligned_cols=46 Identities=13% Similarity=0.244 Sum_probs=39.0
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCC-Cceeeeccc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEK-EYFEITWAS 56 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~-~~~~~~~~~ 56 (368)
+.+...+||+|||||++||+||+.|++ |++|+|+|++ +.+|+.+..
T Consensus 39 ~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 39 NPPGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp SSCCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCCCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 445567899999999999999999984 9999999999 888765443
No 198
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.16 E-value=2.9e-06 Score=75.67 Aligned_cols=96 Identities=17% Similarity=0.117 Sum_probs=70.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-------c---------ccc-----CchhHHHHHHHHHcCCcE
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL-------L---------EFV-----GSRASQIALDWLTSKKVE 198 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-------l---------~~~-----~~~~~~~~~~~l~~~gv~ 198 (368)
..|+|||+|+.|+.+|..+++ .+.+|+++++.... + +.+ .+++...+.+.+++.+++
T Consensus 5 yDvvIIG~GpAGl~AA~~la~--~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~ 82 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGR--SSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTT 82 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcE
Confidence 369999999999999999885 47899999875410 0 111 134566777888899999
Q ss_pred EEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 199 VILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 199 i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+..... ........ .+.+.++.++.+|.+|+|||.+|..
T Consensus 83 ~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 83 IITETI-DHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp EECCCE-EEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred EEEeEE-EEeecCCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 886654 33333333 6677888899999999999987654
No 199
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.16 E-value=1.6e-06 Score=80.40 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=38.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-c-CCcEEEEcCCCceeeeccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-S-FADVVLIDEKEYFEITWAS 56 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~-g~~v~lie~~~~~~~~~~~ 56 (368)
|.+++||+|||||++||+||+.|+ + |.+|+|+|+++.+|+....
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 455789999999999999999997 5 8999999999988866543
No 200
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.16 E-value=1e-05 Score=72.22 Aligned_cols=97 Identities=13% Similarity=0.198 Sum_probs=71.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc---cc--------ccc----CchhHHHHHHHHHcCCcEEEecce
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK---LL--------EFV----GSRASQIALDWLTSKKVEVILNQS 204 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~---~l--------~~~----~~~~~~~~~~~l~~~gv~i~~~~~ 204 (368)
-.|+|||+|+.|+.+|..+++ .+.+|+++++... .+ |.+ .+++.....+...+.+..+..+..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~--~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASR--ANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDI 84 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceee
Confidence 368999999999999999985 4889999987531 11 111 134555666777788888888777
Q ss_pred eeecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 205 VTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 205 v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
............+.+++++++|.+|+|||.+|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~ 118 (312)
T 4gcm_A 85 KSVEDKGEYKVINFGNKELTAKAVIIATGAEYKK 118 (312)
T ss_dssp CEEEECSSCEEEECSSCEEEEEEEEECCCEEECC
T ss_pred eeeeeeecceeeccCCeEEEeceeEEcccCccCc
Confidence 6655544446667778899999999999987754
No 201
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.15 E-value=3.1e-06 Score=81.63 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=74.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc-------------------------c------c------cC
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL-------------------------E------F------VG 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l-------------------------~------~------~~ 181 (368)
..+|+|||+|++|+.+|..|.+ .+.+|+++++++.+. + . ..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~--~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQ--AGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCEEEECccHHHHHHHHHHHh--CCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 3579999999999999999986 578999999875321 0 0 11
Q ss_pred chhHHHHHHHHHcCCc--EEEecceeeecccCCC----eEEcCCCcEEecCEEEEccC--CCCC
Q 017664 182 SRASQIALDWLTSKKV--EVILNQSVTLNTISDG----LIETSSGETIDTDCHFMCTG--KAMA 237 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~~----~v~~~~g~~i~~d~vi~a~G--~~p~ 237 (368)
+++...+.+.+++.++ .++.+++|..++.++. .|.+.+|+++.+|.+|+|+| ..|.
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred HHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 3455666677777777 7889999998876543 78889999999999999999 4554
No 202
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.15 E-value=5.3e-06 Score=73.86 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=70.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEE-EecCcc---c--------ccccC-----chhHHHHHHHHHcCCcEEEe
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVIL-VHRGPK---L--------LEFVG-----SRASQIALDWLTSKKVEVIL 201 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~-i~~~~~---~--------l~~~~-----~~~~~~~~~~l~~~gv~i~~ 201 (368)
.++|+|||+|+.|+.+|..|.++ +.+|++ +++... . .+.++ .++...+.+.+++.|++++.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 35899999999999999999864 788888 887321 0 11222 35667778888899999998
Q ss_pred cceeeecccCC--C--eE-EcCCCcEEecCEEEEccCCCCCc
Q 017664 202 NQSVTLNTISD--G--LI-ETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 202 ~~~v~~i~~~~--~--~v-~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+ .+..+ .++ + .+ ...++ ++.+|.+|+|+|..|..
T Consensus 82 ~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~ 120 (315)
T 3r9u_A 82 V-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKK 120 (315)
T ss_dssp C-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECC
T ss_pred E-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCC
Confidence 8 77777 444 3 32 33344 89999999999987654
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.14 E-value=3e-06 Score=80.55 Aligned_cols=99 Identities=13% Similarity=0.217 Sum_probs=72.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------cc------c-CchhHHHHHHHH-HcCCcEEEeccee
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------EF------V-GSRASQIALDWL-TSKKVEVILNQSV 205 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------~~------~-~~~~~~~~~~~l-~~~gv~i~~~~~v 205 (368)
.+++|||+|+.|+.+|..+++..++.+|+++++.+... +. . ...+.....+.+ ++.|++++.++.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~v 116 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEV 116 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCEE
Confidence 58999999999999999998755688999999876531 10 0 111112223445 4459999999999
Q ss_pred eecccCCCeEEc---CCCc--EEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIET---SSGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~---~~g~--~i~~d~vi~a~G~~p~~ 238 (368)
..+..+++.+.+ .+|+ ++.+|.+|+|||.+|..
T Consensus 117 ~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (480)
T 3cgb_A 117 TKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVM 154 (480)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred EEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccC
Confidence 888776665544 3466 79999999999988754
No 204
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.12 E-value=1.9e-06 Score=80.44 Aligned_cols=41 Identities=12% Similarity=0.261 Sum_probs=36.1
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-C-CcEEEEcCCCceeeec
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-F-ADVVLIDEKEYFEITW 54 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g-~~v~lie~~~~~~~~~ 54 (368)
++++||+|||||++||+||++|++ | .+|+|+|+++..|+..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 456899999999999999999984 8 8999999999887543
No 205
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.12 E-value=7.5e-06 Score=73.19 Aligned_cols=96 Identities=18% Similarity=0.220 Sum_probs=71.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-----------ccccc-----CchhHHHHHHHHHcCCcEEEecc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-----------LLEFV-----GSRASQIALDWLTSKKVEVILNQ 203 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-----------~l~~~-----~~~~~~~~~~~l~~~gv~i~~~~ 203 (368)
.+++|||+|+.|+.+|..|.+ .+.+|+++++... ..+.+ .+.+.+.+.+.+++.|++++.++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAAR--ANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 579999999999999999985 4788999985420 01111 13456667778888999999886
Q ss_pred eeeecccCCCeEE-cCCCcEEecCEEEEccCCCCCc
Q 017664 204 SVTLNTISDGLIE-TSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 204 ~v~~i~~~~~~v~-~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+..++.+++.+. +.+++++.+|.+|+|+|..|..
T Consensus 84 -v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 84 -INKVDLQNRPFRLNGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp -EEEEECSSSSEEEEESSCEEEEEEEEECCCEEECC
T ss_pred -eeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCC
Confidence 777776555222 6677889999999999987654
No 206
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.11 E-value=1.1e-05 Score=72.76 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=73.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc---c--------cccc-----CchhHHHHHHHHHcCCcEEEec
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK---L--------LEFV-----GSRASQIALDWLTSKKVEVILN 202 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~---~--------l~~~-----~~~~~~~~~~~l~~~gv~i~~~ 202 (368)
..+++|||+|+.|+.+|..|.+ .+.+|+++++... . .+.+ .+++...+.+.+++.|++++.+
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAAR--AQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHH--TTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 4679999999999999999986 3788999985311 0 1111 1355666777888899999998
Q ss_pred ceeeecccCCC-eE-EcCCCcEEecCEEEEccCCCCCc
Q 017664 203 QSVTLNTISDG-LI-ETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 203 ~~v~~i~~~~~-~v-~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+ +..++..+. .+ .+.+|+++.+|.+|+|+|..|..
T Consensus 92 ~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 92 D-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp C-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred e-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 7 777766332 57 77888899999999999987653
No 207
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.11 E-value=9.9e-06 Score=77.77 Aligned_cols=97 Identities=27% Similarity=0.265 Sum_probs=75.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc--ccc--------c----ccCchhHHHHHHHHHcCCcEEEecce
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP--KLL--------E----FVGSRASQIALDWLTSKKVEVILNQS 204 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~--~~l--------~----~~~~~~~~~~~~~l~~~gv~i~~~~~ 204 (368)
..+++|||+|+.|+.+|..+++ .+.+|.++++.. ... . ...+.+...+.+.+++.|++++.+++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~--~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~ 289 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSAR--KGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQS 289 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCC
T ss_pred cccEEEECCcHHHHHHHHHHHh--CCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCE
Confidence 4579999999999999999986 478999997531 110 0 11235667778888999999999999
Q ss_pred eeecccC---C-C-eEEcCCCcEEecCEEEEccCCCCC
Q 017664 205 VTLNTIS---D-G-LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 205 v~~i~~~---~-~-~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
+..+..+ + . .+.+.+|+++.+|.+|+|+|..|.
T Consensus 290 v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 290 ASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp EEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred EEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 9888643 1 2 678888989999999999998754
No 208
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.10 E-value=2.2e-05 Score=70.44 Aligned_cols=163 Identities=15% Similarity=0.113 Sum_probs=100.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------------------------cc-----------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---------------------------FV----------- 180 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---------------------------~~----------- 180 (368)
...|+|||+|+.|+.+|..+.++.++.+|.++++.+.+.. .+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 5689999999999999999987546889999998753210 00
Q ss_pred CchhHHHHHHHHHc-CCcEEEecceeeecccCC-----------------C-----eEEc------C--------CCcEE
Q 017664 181 GSRASQIALDWLTS-KKVEVILNQSVTLNTISD-----------------G-----LIET------S--------SGETI 223 (368)
Q Consensus 181 ~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~-----------------~-----~v~~------~--------~g~~i 223 (368)
...+...+.+.+++ .|++++.++.+..+..++ + .+.. . +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 11223455566666 599999999988775433 1 2222 1 23479
Q ss_pred ecCEEEEccCCCCCc-h----hhhccccccccCCCCcE--------EeCCCeeecCCCCeEEecccCCC----C--ccch
Q 017664 224 DTDCHFMCTGKAMAS-S----WLRETILKDSLDGRGRL--------MVDENLRVRGFKNVFAIGDITDI----P--EIKQ 284 (368)
Q Consensus 224 ~~d~vi~a~G~~p~~-~----~~~~~~l~~~~~~~g~i--------~vd~~~~~~~~~~ifa~GD~~~~----~--~~~~ 284 (368)
.++.||.|||..... . .+...++...+...+.+ .|+.+-+. +|++|++|=.+.. | .| .
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~~~~g~~rmgp-~ 315 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELSEIDGANRMGP-T 315 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHHHHHTCEECCS-C
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhHhhcCCCCCCc-c
Confidence 999999999976431 1 12222221001111111 12234444 7999999975432 1 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 017664 285 GYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 285 ~~~a~~~g~~aa~~i~~~l~ 304 (368)
.-.-..+|+.||+-|+..|.
T Consensus 316 fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 316 FGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeecCHHHHHHHHHHHH
Confidence 23446788999999988774
No 209
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.08 E-value=1.2e-05 Score=71.86 Aligned_cols=96 Identities=21% Similarity=0.163 Sum_probs=71.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc---c--------cccc----CchhHHHHHHHHHcCCcEEEecc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK---L--------LEFV----GSRASQIALDWLTSKKVEVILNQ 203 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~---~--------l~~~----~~~~~~~~~~~l~~~gv~i~~~~ 203 (368)
..+++|||+|+.|+.+|..+.+ .+.+|+++++... . .+.+ ...+...+.+.+++.|++++. .
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~--~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAAR--SGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-V 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-C
T ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-e
Confidence 4579999999999999999986 4789999998421 0 1111 124556677788889999988 6
Q ss_pred eeeecccCCC--eEEcCCCcEEecCEEEEccCCCCCc
Q 017664 204 SVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 204 ~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
.+..++.+++ .+.+ +++++.+|.+|+|+|..|..
T Consensus 93 ~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 93 EVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp CEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred eEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 7887776554 5655 55689999999999987643
No 210
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.08 E-value=3.4e-06 Score=80.39 Aligned_cols=101 Identities=10% Similarity=0.118 Sum_probs=73.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhC-CCCeEEEEecCcccc----------cc---cCchhHHHHHHHHHcCCcEEEecce
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDF-PDKKVILVHRGPKLL----------EF---VGSRASQIALDWLTSKKVEVILNQS 204 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~-~~~~v~~i~~~~~~l----------~~---~~~~~~~~~~~~l~~~gv~i~~~~~ 204 (368)
..+++|||+|+.|+.+|..+.+.. ++.+|+++++.+.+. .. ....+.....+.+++.|++++.++.
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~~ 114 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVYMESP 114 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEETTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEEeCCE
Confidence 368999999999999999998642 348999999876421 00 0112222234567788999999999
Q ss_pred eeecccCCCeEEcC-C--CcEEecCEEEEccCCCCCch
Q 017664 205 VTLNTISDGLIETS-S--GETIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 205 v~~i~~~~~~v~~~-~--g~~i~~d~vi~a~G~~p~~~ 239 (368)
+..+..+++.+.+. + ++++.+|.+|+|||.+|..+
T Consensus 115 v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p 152 (490)
T 2bc0_A 115 VQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILP 152 (490)
T ss_dssp EEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCC
T ss_pred EEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCC
Confidence 99887766666554 4 35799999999999887543
No 211
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.07 E-value=2.8e-06 Score=78.22 Aligned_cols=44 Identities=20% Similarity=0.273 Sum_probs=38.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWAS 56 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~ 56 (368)
+...+|++|||||++|+++|++|+ +|.+|+|+|+++.+|+.+..
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 445789999999999999999997 59999999999988866543
No 212
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.07 E-value=1.7e-06 Score=83.13 Aligned_cols=40 Identities=25% Similarity=0.440 Sum_probs=36.0
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cC-CcEEEEcCCCceeeec
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SF-ADVVLIDEKEYFEITW 54 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g-~~v~lie~~~~~~~~~ 54 (368)
+.+||+|||||++||+||+.|+ .| .+|+|+|+++.+|+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 4579999999999999999998 48 9999999999988654
No 213
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.07 E-value=2.4e-06 Score=79.47 Aligned_cols=38 Identities=21% Similarity=0.415 Sum_probs=32.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCc-EEEEcCCCce
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFAD-VVLIDEKEYF 50 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~-v~lie~~~~~ 50 (368)
|++++||+|||||++|+++|..|+ .|.+ |+|+|+.+..
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 455789999999999999999998 4999 9999998753
No 214
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.04 E-value=4.8e-06 Score=78.72 Aligned_cols=99 Identities=10% Similarity=0.023 Sum_probs=71.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCC---CeEEEEecCccccc-------c------------------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPD---KKVILVHRGPKLLE-------F------------------------------ 179 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~---~~v~~i~~~~~~l~-------~------------------------------ 179 (368)
.+|+|||+|++|+.+|..|.+.... .+|+++++.+.+.. .
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~ 110 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKH 110 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHT
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhc
Confidence 3799999999999999999864212 79999998763210 0
Q ss_pred --------------cCchhHHHHHHHHHcCCcEEEecceeeecccC---CC----eEEcCCCc----EEecCEEEEccCC
Q 017664 180 --------------VGSRASQIALDWLTSKKVEVILNQSVTLNTIS---DG----LIETSSGE----TIDTDCHFMCTGK 234 (368)
Q Consensus 180 --------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~---~~----~v~~~~g~----~i~~d~vi~a~G~ 234 (368)
...++.+.+....++.+++++++++|..++.+ ++ .+.+.+|+ ++.+|.+|+|||.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 111 DRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred CceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 00122344445556778999999999988765 33 45666665 8999999999998
Q ss_pred CCCc
Q 017664 235 AMAS 238 (368)
Q Consensus 235 ~p~~ 238 (368)
.|..
T Consensus 191 ~p~~ 194 (463)
T 3s5w_A 191 TPRI 194 (463)
T ss_dssp EECC
T ss_pred CCCC
Confidence 7653
No 215
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.03 E-value=3.4e-06 Score=80.33 Aligned_cols=41 Identities=24% Similarity=0.337 Sum_probs=36.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeee
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEIT 53 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~ 53 (368)
+++.+||+|||||++||+||+.|++ |++|+|+|+++..|+.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 3457899999999999999999985 9999999999988764
No 216
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.01 E-value=3.8e-06 Score=80.33 Aligned_cols=42 Identities=26% Similarity=0.330 Sum_probs=35.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
|.+++||+|||||++||+||+.|++ |++|+|+|+++..|+..
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 4567899999999999999999985 99999999999887654
No 217
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.01 E-value=3.9e-06 Score=80.09 Aligned_cols=53 Identities=4% Similarity=-0.068 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcCC-cEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKK-VEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~g-v~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+.+.+.+.+++.| ++++++++|++|+.+++ .|.+.+|+++++|.||+|+|..
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 56777888888888 99999999999987655 6778888889999999999964
No 218
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.00 E-value=4.2e-06 Score=76.42 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=32.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
|.+++||+|||||++|+++|++|+ +|.+|+|+|++.
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456789999999999999999997 599999999976
No 219
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.00 E-value=3.4e-06 Score=80.03 Aligned_cols=51 Identities=18% Similarity=0.142 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~ 234 (368)
.+.+.+.+.+++.|++|+++++|++|+.+++ .|.+ ++.++++|.||+|++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPA 288 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCH
Confidence 6788888999999999999999999987654 4555 4557999999999875
No 220
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.00 E-value=4e-06 Score=79.56 Aligned_cols=42 Identities=29% Similarity=0.425 Sum_probs=34.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
....+||+|||||++||+||+.|++ |++|+|+|+++..|+..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 3456899999999999999999985 99999999999887543
No 221
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.98 E-value=5.2e-06 Score=78.34 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=61.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||||++|+.+|..|+ .|.+|+++|+.+.+... ..+.+.........+ .+++++.. .+..++.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-------~~~~~~~~l~~~l~~--~Gv~i~~~~~V~~i~~~ 237 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-------MDLEVSRAAERVFKK--QGLTIRTGVRVTAVVPE 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------SCHHHHHHHHHHHHH--HTCEEECSCCEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-------cCHHHHHHHHHHHHH--CCCEEEECCEEEEEEEe
Confidence 468999999999999999997 59999999998764210 011110000000111 14555433 4444432
Q ss_pred -c--EEEecCCeEEEecEEEEecCCCCCCCC
Q 017664 93 -T--EVVTAGGQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 -~--~v~~~~g~~~~~d~lvlAtG~~~~~p~ 120 (368)
+ .+.+.++..+++|.||+|+|..|..+.
T Consensus 238 ~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 238 AKGARVELEGGEVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp TTEEEEEETTSCEEEESEEEECSCEEECCTT
T ss_pred CCEEEEEECCCeEEEcCEEEECcCCCcCCCC
Confidence 2 345557888999999999999987654
No 222
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.98 E-value=1.2e-05 Score=76.75 Aligned_cols=97 Identities=13% Similarity=0.164 Sum_probs=66.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--ccc--------Cc-hhHHHHHHHH--HcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--EFV--------GS-RASQIALDWL--TSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--~~~--------~~-~~~~~~~~~l--~~~gv~i~~~~~v 205 (368)
.++|+|||+|+.|+.+|..|.+ .+.+|++|++++.+. |.+ ++ .+...+.+.+ ++.+++++.. .+
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~--~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v 118 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDT--KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EA 118 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCT--TTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EE
T ss_pred CCCEEEECCcHHHHHHHHHhhh--CCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EE
Confidence 3589999999999999999874 478999999987642 111 11 1112233333 3457888765 56
Q ss_pred eecccCCCeEEc--------------------CCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIET--------------------SSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~--------------------~~g~~i~~d~vi~a~G~~p~~ 238 (368)
+.|..++..|.+ .++.++++|.+|+|||..|+.
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~ 171 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNT 171 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECC
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCccccc
Confidence 777665554432 456789999999999998764
No 223
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.97 E-value=2.4e-06 Score=80.76 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=33.4
Q ss_pred cEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCC
Q 017664 197 VEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 197 v~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~ 234 (368)
++++++++|++|+.+++ .|.+.+|+++++|.||+|++.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCH
Confidence 79999999999987765 778889988999999999874
No 224
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.96 E-value=3.2e-06 Score=79.62 Aligned_cols=40 Identities=18% Similarity=0.259 Sum_probs=35.6
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
+++||+|||||++||+||.+|++ |++|+|+|+++..|+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 35799999999999999999984 99999999999887554
No 225
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.96 E-value=1.8e-05 Score=70.59 Aligned_cols=165 Identities=18% Similarity=0.143 Sum_probs=100.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------c
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF--------------------------------------V 180 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~--------------------------------------~ 180 (368)
..+|+|||+|++|+.+|..+.+..++.+|.++++.+..... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 34799999999999999999875558899999986533100 0
Q ss_pred CchhHHHHHHHHHc-CCcEEEecceeeecccC---C-C-----eEEc------C--------CCcEEec-----------
Q 017664 181 GSRASQIALDWLTS-KKVEVILNQSVTLNTIS---D-G-----LIET------S--------SGETIDT----------- 225 (368)
Q Consensus 181 ~~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~---~-~-----~v~~------~--------~g~~i~~----------- 225 (368)
...+...+.+.+++ .|++++.++.+..+..+ + + .+.+ . ++.++.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 11233445566666 49999999999887654 2 2 2322 1 3457999
Q ss_pred ----CEEEEccCCCCC-chhhhccccccccCC--CC--c--------EEeCCCeeecCCCCeEEecccCC----CC--cc
Q 017664 226 ----DCHFMCTGKAMA-SSWLRETILKDSLDG--RG--R--------LMVDENLRVRGFKNVFAIGDITD----IP--EI 282 (368)
Q Consensus 226 ----d~vi~a~G~~p~-~~~~~~~~l~~~~~~--~g--~--------i~vd~~~~~~~~~~ifa~GD~~~----~~--~~ 282 (368)
|.||.|||.... ..++......+.... .| . ..|+..-...-+|++|++|-.+. .+ .|
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~ 304 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGP 304 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCS
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCCh
Confidence 999999997632 333333111000100 01 1 11222333124899999998652 21 11
Q ss_pred chHHHHHHHHHHHHHHHHHHHc
Q 017664 283 KQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 283 ~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
..-...-+|+.||+.|+..|.
T Consensus 305 -~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 305 -TFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH
T ss_pred -hhhhhhhhhHHHHHHHHHHhh
Confidence 223445778999999987663
No 226
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.94 E-value=1.1e-05 Score=74.42 Aligned_cols=99 Identities=12% Similarity=0.040 Sum_probs=70.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc------c-c--CchhHH----HHHHHHHcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE------F-V--GSRASQ----IALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~------~-~--~~~~~~----~~~~~l~~~gv~i~~~~~v 205 (368)
..+++|||+|+.|+.+|..+.+.....+|+++++++...+ . + ...... ...+.+++.|++++.++.+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 83 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV 83 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSCCC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCCEE
Confidence 4679999999999999999986433467999987653211 0 1 011111 2345567889999999988
Q ss_pred eecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+..++..+.+.++ ++++|.+|+|||.+|..
T Consensus 84 ~~i~~~~~~v~~~~~-~~~~d~lviAtG~~p~~ 115 (384)
T 2v3a_A 84 TGIDPGHQRIWIGEE-EVRYRDLVLAWGAEPIR 115 (384)
T ss_dssp CEEEGGGTEEEETTE-EEECSEEEECCCEEECC
T ss_pred EEEECCCCEEEECCc-EEECCEEEEeCCCCcCC
Confidence 877765557777654 79999999999988754
No 227
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.94 E-value=1e-05 Score=76.40 Aligned_cols=92 Identities=12% Similarity=0.044 Sum_probs=69.3
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--------ccc--CchhHHHHHHHHHcCCcEEEecceeee
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--------EFV--GSRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--------~~~--~~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
..++++|||+|++|+.+|..|.+..++.+|+++++.+.+. |.+ ...+...+.+.+++.|++++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3578999999999999999998764458999999887653 211 23556677788899999999987662
Q ss_pred cccCCCeEEcCCCcEEecCEEEEccCCCC
Q 017664 208 NTISDGLIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 208 i~~~~~~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..+.+.+. ++.+|.+|+|||..|
T Consensus 84 -----~~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 -----RDVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -----TTBCHHHH-HHHSSEEEECCCCCE
T ss_pred -----eEEEeccc-eEEcCEEEEecCcCC
Confidence 12333333 478999999999874
No 228
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.93 E-value=8.1e-06 Score=76.89 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=67.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc-------ccc--cCchhHHHHHHHHHcCCcEEEecceeeecc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL-------LEF--VGSRASQIALDWLTSKKVEVILNQSVTLNT 209 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~-------l~~--~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 209 (368)
.++|+|||+|+.|+.+|..|.++ +.+|+++++.+.+ .|. .+.++.....+.+++.|+++++++.+..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~-- 197 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR-- 197 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT--
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc--
Confidence 57899999999999999999864 7899999988754 222 2445667777889999999999987631
Q ss_pred cCCCeEEcCCCcEEecCEEEEccCCC
Q 017664 210 ISDGLIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 210 ~~~~~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+.++++ .+++|.+|+|||..
T Consensus 198 ----~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 ----DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp ----TBCHHHH-HSSCSEEEECCCCC
T ss_pred ----EEEhhHh-HhhCCEEEEecCCC
Confidence 1222233 35799999999986
No 229
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.92 E-value=7.1e-06 Score=75.78 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=31.2
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
++||+|||||++|+++|..|++ |.+|+|+|+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4799999999999999999985 999999999874
No 230
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.91 E-value=4.9e-06 Score=77.91 Aligned_cols=33 Identities=24% Similarity=0.524 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++||+||||||+|+++|..|+ +|++|+|+|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 479999999999999999998 599999999986
No 231
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.91 E-value=6.6e-06 Score=76.38 Aligned_cols=53 Identities=13% Similarity=0.210 Sum_probs=41.0
Q ss_pred chhHHHHHHHHHcCCcEEEecceee---------ecccCCC--eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVT---------LNTISDG--LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~---------~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++.+++|+ .+..+++ .+.+.+| ++.+|.||+|+|..
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 3567788888999999999999998 8876655 4566666 79999999999976
No 232
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.91 E-value=8.3e-06 Score=75.13 Aligned_cols=40 Identities=20% Similarity=0.419 Sum_probs=35.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeecc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWA 55 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~ 55 (368)
++||+|||||++|+++|..|++ |++|+|+|+++..|+.+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccc
Confidence 4799999999999999999985 899999999998886543
No 233
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.91 E-value=7.3e-05 Score=72.65 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=70.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-cc-----------------------cc----------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-LL-----------------------EF---------------- 179 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-~l-----------------------~~---------------- 179 (368)
..|+|||+|+.|+++|..+++ .+.+|.+++++.. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAAR--MGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CCEEEECChHHHHHHHHHHHh--CCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 479999999999999999985 5889999997631 10 00
Q ss_pred --------------cC-chhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCC
Q 017664 180 --------------VG-SRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 180 --------------~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+ ..+...+.+.+++ .|++++ ++.|..+..+++ .|.+.+|+++.+|.||+|+|..+
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 00 1234556677777 699995 578888876555 57788888999999999999764
No 234
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.90 E-value=7.3e-06 Score=77.11 Aligned_cols=54 Identities=17% Similarity=0.037 Sum_probs=46.2
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeeccc-CCC---eEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTI-SDG---LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~-~~~---~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.++.+.+.+.+++.|++++++++|++|.. +++ .|++.+|++++||.||.++++.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 47888999999999999999999999987 444 6888999899999999999988
No 235
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.90 E-value=8.8e-06 Score=76.25 Aligned_cols=56 Identities=14% Similarity=-0.034 Sum_probs=45.8
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCCe--EEcCCCcEEecCEEEEccCCCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDGL--IETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~--v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
..+.+.+.+.+++.|++++++++|++|..+++. ....+|+++.+|.||+++|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 477888888899999999999999999876652 22357788999999999998753
No 236
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.90 E-value=7.2e-06 Score=77.77 Aligned_cols=39 Identities=28% Similarity=0.584 Sum_probs=34.5
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-C--CcEEEEcCCCceeee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-F--ADVVLIDEKEYFEIT 53 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g--~~v~lie~~~~~~~~ 53 (368)
+++||+|||||++||++|++|++ | .+|+|+|+++..|+.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 35899999999999999999985 7 999999999887653
No 237
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.89 E-value=8.3e-06 Score=73.19 Aligned_cols=37 Identities=16% Similarity=0.317 Sum_probs=32.9
Q ss_pred CCCcEEEECCChHHHHHHHHhhc---CCcEEEEcCCCcee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEYFE 51 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~~~ 51 (368)
..+||+|||||++|+++|..|++ |.+|+|||+++..+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 36899999999999999999974 99999999997654
No 238
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.89 E-value=8.6e-06 Score=77.45 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=37.0
Q ss_pred CCCCcEEEECCChHHHHHHHHhhc-C-CcEEEEcCCCceeeeccc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQS-F-ADVVLIDEKEYFEITWAS 56 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~-g-~~v~lie~~~~~~~~~~~ 56 (368)
++++||+|||||++||++|++|++ | .+|+|+|+++.+|+.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 356899999999999999999984 6 799999999988866543
No 239
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.88 E-value=6.3e-05 Score=69.32 Aligned_cols=96 Identities=16% Similarity=0.180 Sum_probs=72.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc----------c-c------------------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL----------L-E------------------------------ 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~----------l-~------------------------------ 178 (368)
.+|+|||+|++|+.+|..|.+. +.+|+++++.+.. + +
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred ccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 4699999999999999999864 7899999976531 0 0
Q ss_pred -------------c------cCchhHHHHHHHHHcCCcEEEecceeeecccCC-C--eEEc-CCCc--EEecCEEEEccC
Q 017664 179 -------------F------VGSRASQIALDWLTSKKVEVILNQSVTLNTISD-G--LIET-SSGE--TIDTDCHFMCTG 233 (368)
Q Consensus 179 -------------~------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~--~v~~-~~g~--~i~~d~vi~a~G 233 (368)
. ....+.+.+.+.+++.|++++.+++|+.++.++ + .+.+ .+|+ ++++|+||.|.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 0 001234455666777899999999999887653 3 6666 6886 799999999999
Q ss_pred CCCC
Q 017664 234 KAMA 237 (368)
Q Consensus 234 ~~p~ 237 (368)
....
T Consensus 161 ~~S~ 164 (394)
T 1k0i_A 161 FHGI 164 (394)
T ss_dssp TTCS
T ss_pred CCcH
Confidence 7643
No 240
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.88 E-value=9e-06 Score=77.60 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=37.3
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
.+..++||+|||||++||++|..|++ |.+|+|+|+++..|+..
T Consensus 29 ~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 29 ATSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 34457899999999999999999985 99999999999887654
No 241
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.88 E-value=5.8e-05 Score=69.97 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=31.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.+|+|||+|.+|+-+|..|+++.++.+|+++++..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 47999999999999999999866689999999763
No 242
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.87 E-value=9.7e-06 Score=74.19 Aligned_cols=39 Identities=15% Similarity=0.301 Sum_probs=34.6
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeec
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITW 54 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~ 54 (368)
++|++|||||++|+++|.+|++ |.+|+|+|+++..|+..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 3689999999999999999985 99999999998877553
No 243
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.87 E-value=1.3e-05 Score=75.73 Aligned_cols=96 Identities=25% Similarity=0.257 Sum_probs=61.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||||+.|+.+|..|+ .|.+|+|+|+.+.+... + .+.+.........+ .+++++.. .+..++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~~--~gV~i~~~~~v~~i~~~ 239 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ---G----DPETAALLRRALEK--EGIRVRTKTKAVGYEKK 239 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHHH--TTCEEECSEEEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc---c----CHHHHHHHHHHHHh--cCCEEEcCCEEEEEEEe
Confidence 478999999999999999997 49999999998764311 0 11110000000111 25666543 4445542
Q ss_pred -c--EEEec-C--Ce--EEEecEEEEecCCCCCCCC
Q 017664 93 -T--EVVTA-G--GQ--TFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 -~--~v~~~-~--g~--~~~~d~lvlAtG~~~~~p~ 120 (368)
+ .+.+. + |+ .+++|.|++|+|..|..+.
T Consensus 240 ~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 240 KDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp TTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred CCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 2 34444 5 65 7999999999999988765
No 244
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.85 E-value=7.6e-05 Score=71.22 Aligned_cols=97 Identities=23% Similarity=0.257 Sum_probs=69.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCC-CCeEEEEecCcccc---------c--------------------cc---------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFP-DKKVILVHRGPKLL---------E--------------------FV--------- 180 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~-~~~v~~i~~~~~~l---------~--------------------~~--------- 180 (368)
.+++|||+|+.|+.+|..+++..+ +.+|+++++.+ +. | .+
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 469999999999999999997655 88999999874 10 0 00
Q ss_pred Cc-h-----------hHHHHHHHHHcCCcEEEecceeeecccC----CC--eEEcCCCc--EEecCEEEEccCCCCCc
Q 017664 181 GS-R-----------ASQIALDWLTSKKVEVILNQSVTLNTIS----DG--LIETSSGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 181 ~~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~----~~--~v~~~~g~--~i~~d~vi~a~G~~p~~ 238 (368)
+. . +...+.+.+++.|++++.++ +..+... ++ .+.+.+|+ ++.+|.+|+|||..|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~ 158 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRI 158 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 00 0 11224566788999999986 5555542 13 56667776 79999999999988754
No 245
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.84 E-value=0.00012 Score=70.90 Aligned_cols=96 Identities=18% Similarity=0.191 Sum_probs=71.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-cc-----------------------cc---------------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-LL-----------------------EF--------------- 179 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-~l-----------------------~~--------------- 179 (368)
...|+|||+|+.|+++|..+++ .+.+|.+++++.. +. ..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr--~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAAR--MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 3579999999999999999986 4889999997631 10 00
Q ss_pred --------c-------C-chhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCC
Q 017664 180 --------V-------G-SRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 180 --------~-------~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
. + ..+...+.+.+++ .|++++ ++.|+.+..+++ .|.+.+|+++.+|.||+|||..++
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 0 0 1234556677777 599995 678888776655 578889999999999999997654
No 246
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.83 E-value=5.9e-05 Score=72.76 Aligned_cols=94 Identities=15% Similarity=0.195 Sum_probs=69.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--------c-------------ccC----------------c
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--------E-------------FVG----------------S 182 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--------~-------------~~~----------------~ 182 (368)
.+|+|||+|++|+.+|..|.+. +.+|+++++++.+. | .+. +
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 4799999999999999999863 78999999875321 0 001 1
Q ss_pred hhHHHHHHHHHcCC--cEEEecceeeecccCCC----eEEcCCCcEEecCEEEEccCCC
Q 017664 183 RASQIALDWLTSKK--VEVILNQSVTLNTISDG----LIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 183 ~~~~~~~~~l~~~g--v~i~~~~~v~~i~~~~~----~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
++.+.+....++.+ ++++++++|.+++.+++ .|.+.+|+++.+|.||+|+|..
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 23344445556655 67889999998876432 6788889899999999999953
No 247
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.83 E-value=9.1e-06 Score=76.59 Aligned_cols=90 Identities=16% Similarity=0.076 Sum_probs=68.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhh-hCC----CCeEEEEecCcccc--------c--ccCchhHHHHHHHHHcCCcEEEecc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAV-DFP----DKKVILVHRGPKLL--------E--FVGSRASQIALDWLTSKKVEVILNQ 203 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~-~~~----~~~v~~i~~~~~~l--------~--~~~~~~~~~~~~~l~~~gv~i~~~~ 203 (368)
.++|+|||+|+.|+.+|..|.+ ..+ +.+|+++++.+.+. | ....++...+.+.+++.|++++.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4689999999999999999986 433 78999999886542 1 1223567778888899999999885
Q ss_pred eeeecccCCCeEEcCCCcEEecCEEEEccCCC
Q 017664 204 SVTLNTISDGLIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 204 ~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
.+ +..+.+.++ ++.+|.+|+|||..
T Consensus 83 ~v------~~~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 83 VV------GEHVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CB------TTTBCHHHH-HHHSSEEEECCCCC
T ss_pred EE------CCEEEECCC-eEeCCEEEEeeCCC
Confidence 43 123445455 47899999999986
No 248
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.83 E-value=1.5e-05 Score=75.13 Aligned_cols=96 Identities=16% Similarity=0.138 Sum_probs=63.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||||+.|+.+|..|+ .|.+|+|+|+.+.+... ..+...........+ .+++++.. .+..++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~~~~~~~~l~~~l~~--~Gv~i~~~~~v~~i~~~ 237 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-------FDPMISETLVEVMNA--EGPQLHTNAIPKAVVKN 237 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-------SCHHHHHHHHHHHHH--HSCEEECSCCEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-------hhHHHHHHHHHHHHH--CCCEEEeCCEEEEEEEe
Confidence 468999999999999999997 49999999998754211 011110000000011 14555443 3444432
Q ss_pred ----cEEEecCCeEEEecEEEEecCCCCCCCC
Q 017664 93 ----TEVVTAGGQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 ----~~v~~~~g~~~~~d~lvlAtG~~~~~p~ 120 (368)
..+.+.+|+.+++|.+++|+|..|+.+.
T Consensus 238 ~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 269 (450)
T 1ges_A 238 TDGSLTLELEDGRSETVDCLIWAIGREPANDN 269 (450)
T ss_dssp TTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred CCcEEEEEECCCcEEEcCEEEECCCCCcCCCC
Confidence 1567778888999999999999988764
No 249
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.81 E-value=1.4e-05 Score=76.77 Aligned_cols=97 Identities=18% Similarity=0.138 Sum_probs=62.5
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEee--
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSIT-- 91 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 91 (368)
+.+++|||||+.|+-.|..+++ |.+|+|+++...+.. + +++..........+ .++.+... .+..+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~----~----D~ei~~~l~~~l~~--~gi~~~~~~~v~~~~~~ 292 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG----F----DQQCAVKVKLYMEE--QGVMFKNGILPKKLTKM 292 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT----S----CHHHHHHHHHHHHH--TTCEEEETCCEEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc----c----chhHHHHHHHHHHh--hcceeecceEEEEEEec
Confidence 4689999999999999999985 999999998653321 0 11111110001111 24555433 222222
Q ss_pred cc--EEEecCCeEEEecEEEEecCCCCCCCCch
Q 017664 92 DT--EVVTAGGQTFVYDYVVVATGHVESVPKSR 122 (368)
Q Consensus 92 ~~--~v~~~~g~~~~~d~lvlAtG~~~~~p~~~ 122 (368)
.. .+.+.++..+.+|.|++|+|.+|+...+.
T Consensus 293 ~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~ 325 (542)
T 4b1b_A 293 DDKILVEFSDKTSELYDTVLYAIGRKGDIDGLN 325 (542)
T ss_dssp TTEEEEEETTSCEEEESEEEECSCEEESCGGGC
T ss_pred CCeEEEEEcCCCeEEEEEEEEcccccCCccccC
Confidence 12 56677888899999999999999887654
No 250
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.80 E-value=1.2e-05 Score=75.91 Aligned_cols=96 Identities=18% Similarity=0.238 Sum_probs=60.2
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeecc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITDT 93 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 93 (368)
..+++|||||+.|+.+|..|++ |.+|+|+|+.+.+... + .+...........+ .+++++.. .+..++..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~ 241 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---Y----DSELTAPVAESLKK--LGIALHLGHSVEGYENG 241 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHHH--HTCEEETTCEEEEEETT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc---c----CHHHHHHHHHHHHH--CCCEEEECCEEEEEEeC
Confidence 4689999999999999999984 9999999998865311 0 11110000000010 14555432 44444432
Q ss_pred EEEe--cCC--eEEEecEEEEecCCCCCCCC
Q 017664 94 EVVT--AGG--QTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 94 ~v~~--~~g--~~~~~d~lvlAtG~~~~~p~ 120 (368)
.+.. .+| ..+++|.|++|+|.+|+.+.
T Consensus 242 ~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 242 CLLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred CEEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 1222 245 67999999999999987764
No 251
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.80 E-value=4.6e-05 Score=72.05 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=68.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------------------------------cCc-h----
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------------------------------VGS-R---- 183 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------------------------------~~~-~---- 183 (368)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.+.+... ++. .
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~--~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAK--AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDR 82 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHh--CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHH
Confidence 469999999999999999986 48899999966543110 000 0
Q ss_pred ------hH--HHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcE--EecCEEEEccCCCCCc
Q 017664 184 ------AS--QIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGET--IDTDCHFMCTGKAMAS 238 (368)
Q Consensus 184 ------~~--~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~--i~~d~vi~a~G~~p~~ 238 (368)
+. ..+.+.+++.|++++.+ .+..+..+.-.+.+.+|++ +.+|.+|+|||..|..
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~ 146 (466)
T 3l8k_A 83 KDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAK 146 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred HHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccC
Confidence 00 33444556789999887 4555553322677788888 9999999999987654
No 252
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.80 E-value=1.1e-05 Score=78.05 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYF 50 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~ 50 (368)
.+||+||||||+|+++|..|+ .|.+|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999998 59999999998753
No 253
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.78 E-value=5.1e-05 Score=71.79 Aligned_cols=96 Identities=19% Similarity=0.193 Sum_probs=66.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------c---------------------c--------cC
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------E---------------------F--------VG 181 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~---------------------~--------~~ 181 (368)
.+++|||+|+.|+.+|..+++ .+.+|+++++.+.+. | . .+
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQ--LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 479999999999999999986 478999999885331 0 0 00
Q ss_pred -ch-----------hHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCC--cEEecCEEEEccCCCCCc
Q 017664 182 -SR-----------ASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSG--ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 182 -~~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~ 238 (368)
+. +...+.+.+++.|++++.++.+. +....-.+.+.+| +++.+|.+|+|||..|..
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~-i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~ 150 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF-ETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE 150 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE-EETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-eeCCEEEEEecCCceEEEEcCEEEECCCCCcCC
Confidence 00 11112456677899999887543 3321115666777 689999999999988754
No 254
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.78 E-value=1.2e-05 Score=78.22 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-c------CCcEEEEcCCCcee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S------FADVVLIDEKEYFE 51 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~------g~~v~lie~~~~~~ 51 (368)
.+||+||||||||+++|..|+ . |.+|+|||+.+..+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 479999999999999999997 5 89999999987543
No 255
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.77 E-value=1.9e-05 Score=74.61 Aligned_cols=96 Identities=19% Similarity=0.275 Sum_probs=62.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||||+.|+.+|..|+ .|.+|+++++.+.+... + .+........... ..+++++.. .+..++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~---~----~~~~~~~l~~~l~--~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ---F----DPLLSATLAENMH--AQGIETHLEFAVAALERD 236 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHH--HTTCEEESSCCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc---c----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEe
Confidence 468999999999999999997 49999999998754211 0 1111000000001 124555433 3444432
Q ss_pred ---cEEEecCCe-EEEecEEEEecCCCCCCCC
Q 017664 93 ---TEVVTAGGQ-TFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 ---~~v~~~~g~-~~~~d~lvlAtG~~~~~p~ 120 (368)
..+.+.+|+ .+.+|.|++|+|..|+.+.
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~ 268 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRD 268 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCTT
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCCC
Confidence 256677888 8999999999999987754
No 256
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.77 E-value=0.00011 Score=69.50 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=66.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc--------------------------ccccc----------C-
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK--------------------------LLEFV----------G- 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~--------------------------~l~~~----------~- 181 (368)
..+++|||+|+.|+.+|..+++ .+.+|++++++.. ..+.. +
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVE--QGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4689999999999999999986 4789999998730 01111 0
Q ss_pred chhHH-------H-----HHHHHHcC-CcEEEecceeeecccCCCeEEcCCC--cEEecCEEEEccCCCCCc
Q 017664 182 SRASQ-------I-----ALDWLTSK-KVEVILNQSVTLNTISDGLIETSSG--ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 182 ~~~~~-------~-----~~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~ 238 (368)
..+.. . ..+.+++. |++++.+. +..+....-.+.+.+| +++++|.+|+|||.+|..
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGE-ARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEE-EEEEETTEEEEEETTSSEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEE-EEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCC
Confidence 01111 1 12445666 99999875 5544432225667777 689999999999987754
No 257
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.76 E-value=6.4e-05 Score=71.13 Aligned_cols=97 Identities=21% Similarity=0.209 Sum_probs=67.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------------------------------------cC
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------------------------------------VG 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------------------------------------~~ 181 (368)
..+++|||+|+.|+.+|..+.+. +.+|+++++.+.+... .+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 45799999999999999999864 7899999988533100 00
Q ss_pred c-h-----------hHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCC--cEEecCEEEEccCCCCCc
Q 017664 182 S-R-----------ASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSG--ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 182 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~~ 238 (368)
. . +...+.+.+++.|++++.++.+. +..+.-.+.+.+| +++.+|.+|+|||..|..
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 0 0 11113455677899999988654 3221115556677 689999999999988754
No 258
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.74 E-value=0.00018 Score=69.85 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=70.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc-cc-----------------------cc---------------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK-LL-----------------------EF--------------- 179 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~-~l-----------------------~~--------------- 179 (368)
...|+|||+|..|+++|..+++ .+.+|.++++... +. +.
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr--~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVAR--GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECccHHHHHHHHHHHH--CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 4589999999999999999986 4889999997631 10 00
Q ss_pred ---------------cC-chhHHHHHHHHHc-CCcEEEecceeeecccCCC---eEEcCCCcEEecCEEEEccCCCCC
Q 017664 180 ---------------VG-SRASQIALDWLTS-KKVEVILNQSVTLNTISDG---LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 180 ---------------~~-~~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~~---~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
.+ ..+...+.+.+++ .|++++. ..|..+..+++ .|.+.+|+++.+|.||+|+|..++
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 00 0234556667777 4999965 47887766555 477888989999999999997644
No 259
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.74 E-value=1.8e-05 Score=72.69 Aligned_cols=34 Identities=21% Similarity=0.473 Sum_probs=30.9
Q ss_pred CcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCce
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEYF 50 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~~ 50 (368)
+||+||||||+|+++|..|+ . |.+|+|+|+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 48999999999999999997 5 9999999998765
No 260
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.74 E-value=2e-05 Score=77.54 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHhhc--CCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS--FADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie~~~~ 49 (368)
.++||+||||||+||++|..|++ |.+|+|||+.+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 45799999999999999999975 999999999865
No 261
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.73 E-value=2.7e-05 Score=74.19 Aligned_cols=96 Identities=19% Similarity=0.186 Sum_probs=67.7
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc----------ccCc---hhHHHHHHHHHcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE----------FVGS---RASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~----------~~~~---~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
..+|+|||+|+.|+.+|..|.++ .+|+++++++.+.. .++. ++...+.+.+ +.|++++.++.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v 183 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSA 183 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEE
Confidence 45799999999999999999863 89999998765411 0111 1222223333 569999999999
Q ss_pred eecccCCCe--EEc-CCCc--EEecCEEEEccCCCCCc
Q 017664 206 TLNTISDGL--IET-SSGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~~--v~~-~~g~--~i~~d~vi~a~G~~p~~ 238 (368)
..+..++.. +.. .+++ ++++|.+|+|||..|..
T Consensus 184 ~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 184 LGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp CCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 887766552 222 4454 68999999999987654
No 262
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.72 E-value=2.1e-05 Score=70.16 Aligned_cols=36 Identities=25% Similarity=0.354 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCcee
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEYFE 51 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~~~ 51 (368)
.+||+|||||++|+++|..|+ . |++|+|+|+++..+
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 459999999999999999997 4 89999999987664
No 263
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.72 E-value=0.00014 Score=68.41 Aligned_cols=95 Identities=21% Similarity=0.229 Sum_probs=66.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------c--------------------c-------cCc-
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------E--------------------F-------VGS- 182 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~--------------------~-------~~~- 182 (368)
.+++|||+|+.|+.+|..+++ .+.+|+++++.. +. | . .+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~lie~~~-~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQ--LGQKVTIVEKGN-LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEECCC-CCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 479999999999999999986 378999999862 10 0 0 000
Q ss_pred h-----------hHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCC-cEEecCEEEEccCCCCCc
Q 017664 183 R-----------ASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSG-ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 183 ~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g-~~i~~d~vi~a~G~~p~~ 238 (368)
. +...+.+.+++.|++++.++.+. +....-.+.+.+| +++++|.+|+|||.+|..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VDANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 0 11223456778899999988653 3221115666777 689999999999988754
No 264
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.71 E-value=2.2e-05 Score=77.27 Aligned_cols=34 Identities=26% Similarity=0.510 Sum_probs=31.0
Q ss_pred CCcEEEECCChHHHHHHHHhh---c--CCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ---S--FADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~---~--g~~v~lie~~~~ 49 (368)
.+||||||||+|||+||..|+ + |.+|+||||.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 589999999999999999987 3 999999999874
No 265
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.71 E-value=2.1e-05 Score=75.83 Aligned_cols=53 Identities=19% Similarity=0.390 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEcCCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+ +|+.+..++ + .+.+.+|+++++|.||.|+|...
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 56677888888899999999 788887643 3 57788888899999999999764
No 266
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.00021 Score=67.82 Aligned_cols=98 Identities=20% Similarity=0.219 Sum_probs=67.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc--------------------------cc--ccC------c--
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL--------------------------LE--FVG------S-- 182 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~--------------------------l~--~~~------~-- 182 (368)
..+++|||+|+.|+.+|..+.+ .+.+|+++++++.- .. .+. +
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~--~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAAS--YGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred cCCEEEEcCCHHHHHHHHHHHH--CCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3579999999999999999986 48899999986410 00 000 0
Q ss_pred -----------------hhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCc--EEecCEEEEccCCCCCch
Q 017664 183 -----------------RASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGE--TIDTDCHFMCTGKAMASS 239 (368)
Q Consensus 183 -----------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~--~i~~d~vi~a~G~~p~~~ 239 (368)
.+...+.+.+++.|++++.++ +..+....-.+.+.+|+ ++.+|.+|+|||.+|..+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p 163 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFP 163 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCC
Confidence 011123345677899999885 55443221156666776 899999999999887543
No 267
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.67 E-value=2.7e-05 Score=73.97 Aligned_cols=96 Identities=18% Similarity=0.185 Sum_probs=61.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeecc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITDT 93 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 93 (368)
..+++|||||+.|+-+|..|+ .|.+|+|+|+.+.+... ..+...........+ .+++++.. .+..++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-------~~~~~~~~l~~~l~~--~gV~i~~~~~v~~i~~~ 255 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-------ADRDLVKVWQKQNEY--RFDNIMVNTKTVAVEPK 255 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-------SCHHHHHHHHHHHGG--GEEEEECSCEEEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-------cCHHHHHHHHHHHHh--cCCEEEECCEEEEEEEc
Confidence 578999999999999999997 49999999998764311 111111000000111 25555533 44444321
Q ss_pred ----EEEecC----CeEEEecEEEEecCCCCCCCC
Q 017664 94 ----EVVTAG----GQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 94 ----~v~~~~----g~~~~~d~lvlAtG~~~~~p~ 120 (368)
.+.+.+ ++.+.+|.+++|+|..|+.+.
T Consensus 256 ~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~ 290 (482)
T 1ojt_A 256 EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKL 290 (482)
T ss_dssp TTEEEEEEESSSCCSSCEEESCEEECCCEEECGGG
T ss_pred CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCC
Confidence 455555 677899999999999987543
No 268
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=6.5e-05 Score=71.69 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=62.8
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||||+.|+-+|..|++ |.+|+++++.+.+... .++...........+ .+++++.. .+..++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------~d~~~~~~l~~~l~~--~gv~i~~~~~v~~i~~~ 246 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-------FDESVINVLENDMKK--NNINIVTFADVVEIKKV 246 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-------SCHHHHHHHHHHHHH--TTCEEECSCCEEEEEES
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-------cchhhHHHHHHHHHh--CCCEEEECCEEEEEEEc
Confidence 5689999999999999999984 9999999998764311 011111000000111 25555533 3444432
Q ss_pred --c--EEEecCCeE-EEecEEEEecCCCCCCCC
Q 017664 93 --T--EVVTAGGQT-FVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 --~--~v~~~~g~~-~~~d~lvlAtG~~~~~p~ 120 (368)
. .+.+.+|+. +++|.+++|+|..|+.+.
T Consensus 247 ~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~ 279 (500)
T 1onf_A 247 SDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTEN 279 (500)
T ss_dssp STTCEEEEETTSCEEEEESEEEECCCBCCTTTT
T ss_pred CCceEEEEECCCcEEEECCEEEECCCCCcCCCC
Confidence 1 566778877 999999999999987643
No 269
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.66 E-value=3.4e-05 Score=79.97 Aligned_cols=92 Identities=12% Similarity=0.179 Sum_probs=68.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCC-eEEEEecCcccc-------c--ccCchhHHHHHHHHHcCCcEEEecceeeec
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDK-KVILVHRGPKLL-------E--FVGSRASQIALDWLTSKKVEVILNQSVTLN 208 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~-~v~~i~~~~~~l-------~--~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i 208 (368)
.++|+|||+|+.|+.+|..|++. +. +|+++++.+.+. + ..+.+..+...+.+++.||++++++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST-
T ss_pred CCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc-
Confidence 56899999999999999999863 66 799999876542 1 12334556667888999999999987642
Q ss_pred ccCCCeEEcCCCcEEecCEEEEccCC-CCC
Q 017664 209 TISDGLIETSSGETIDTDCHFMCTGK-AMA 237 (368)
Q Consensus 209 ~~~~~~v~~~~g~~i~~d~vi~a~G~-~p~ 237 (368)
..+.+++++++.+|.+|+|||. .|.
T Consensus 264 ----~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 264 ----NEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp ----TSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred ----ceEEhhhcCccCCCEEEEecCCCCCC
Confidence 1344445556789999999998 454
No 270
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.66 E-value=2.2e-05 Score=71.19 Aligned_cols=44 Identities=20% Similarity=0.132 Sum_probs=34.5
Q ss_pred chhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCC
Q 017664 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++. ++|+.++..+ .+.+|.||+|+|..
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~---------~~~a~~VV~A~G~~ 185 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA---------REGADVIVNCTGVW 185 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH---------HTTCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh---------cCCCCEEEECCCcC
Confidence 46677888889999999998 8887665321 26799999999965
No 271
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.65 E-value=0.00015 Score=66.97 Aligned_cols=97 Identities=15% Similarity=0.192 Sum_probs=68.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------cCc-h---------------------------
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------VGS-R--------------------------- 183 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------~~~-~--------------------------- 183 (368)
..+|+|||+|++|+.+|..|.+ .+.+|+++++.+..... ..+ .
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~ 103 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQ--NGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIAD 103 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--TTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEEC
Confidence 4689999999999999999985 58899999987532110 000 0
Q ss_pred ----------------------hHHHHHHHHHc--CCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCCCCC
Q 017664 184 ----------------------ASQIALDWLTS--KKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 184 ----------------------~~~~~~~~l~~--~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
-...+.+.|.+ .+++++.+++|+.++.+++ .+.+.+|+++++|+||.|.|....
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 00112222222 1357888999998877655 677888988999999999997643
No 272
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.64 E-value=3.8e-05 Score=75.92 Aligned_cols=43 Identities=30% Similarity=0.371 Sum_probs=37.3
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWA 55 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~ 55 (368)
..+.+||+|||||++||++|+.|. +|++|+|+|+.+..|+...
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 345789999999999999999997 5999999999998876543
No 273
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.63 E-value=3.3e-05 Score=74.38 Aligned_cols=36 Identities=22% Similarity=0.396 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHhhcCCcEEEEcCCCce
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEYF 50 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~~~ 50 (368)
..+||||||||+||++||..|++|.+|+|+||.+..
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~ 42 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVT 42 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTT
T ss_pred CCCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCC
Confidence 358999999999999999999779999999998754
No 274
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.62 E-value=4.3e-05 Score=69.32 Aligned_cols=47 Identities=15% Similarity=0.242 Sum_probs=40.4
Q ss_pred CCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCCCC
Q 017664 259 DENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNK 308 (368)
Q Consensus 259 d~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~~~ 308 (368)
+++|+++..+|+|.+|...+... -..|..||.+|+.|+++.+.|+++
T Consensus 320 ~~tle~k~~~~Lf~AGqi~G~~G---y~eAaa~Gl~AG~naa~~~~g~~p 366 (443)
T 3g5s_A 320 GETLEFREAEGLYAAGVLAGVEG---YLESAATGFLAGLNAARKALGLPP 366 (443)
T ss_dssp CTTSEETTEEEEEECGGGGTBCS---HHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ChhceecCCCCEEECccccccHH---HHHHHHhHHHHHHHHHHHhcCCCC
Confidence 36899988999999999998732 358999999999999999999864
No 275
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.62 E-value=3.8e-05 Score=76.90 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=35.2
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceee
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEI 52 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~ 52 (368)
..+.+||+|||||++|+++|..|+ .|++|+|+|+.+..|+
T Consensus 333 ~~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 333 DYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GGTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 345689999999999999999998 4999999999887765
No 276
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.61 E-value=3.7e-05 Score=72.79 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=34.8
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CC-cEEEEcCCCceeeecc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FA-DVVLIDEKEYFEITWA 55 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~-~v~lie~~~~~~~~~~ 55 (368)
+.+||+|||||++|+++|+.|++ |. +|+|+|+++..|+.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMH 45 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCcee
Confidence 46799999999999999999984 88 8999999998876543
No 277
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.61 E-value=3.1e-05 Score=74.45 Aligned_cols=53 Identities=23% Similarity=0.225 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHc-CCcEEEecceeeecccCC-C---eEEcCCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTS-KKVEVILNQSVTLNTISD-G---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~-~gv~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++ .|++++.+ +|+.++.++ + .+.+.+|+++++|.||.|+|...
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 456777788888 89999999 588887653 3 56677877899999999999864
No 278
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.61 E-value=5.9e-05 Score=71.86 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=63.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-c---CCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S---FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSI 90 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 90 (368)
..+++|||+|+.|+-+|..|+ . |.+|+++++.+.+... ..+........... ..+++++.. .+..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~-------~d~~~~~~l~~~l~--~~GV~i~~~~~v~~i 261 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG-------FDETIREEVTKQLT--ANGIEIMTNENPAKV 261 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT-------SCHHHHHHHHHHHH--HTTCEEEESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc-------cCHHHHHHHHHHHH--hCCCEEEeCCEEEEE
Confidence 468999999999999999886 5 9999999998764211 11111100000011 126666544 44444
Q ss_pred ec-----cEEEecCCeEEEecEEEEecCCCCCCC
Q 017664 91 TD-----TEVVTAGGQTFVYDYVVVATGHVESVP 119 (368)
Q Consensus 91 ~~-----~~v~~~~g~~~~~d~lvlAtG~~~~~p 119 (368)
+. ..+.+.+|+.+++|.+++|+|..|+.+
T Consensus 262 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 262 SLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred EEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 32 156777888899999999999998764
No 279
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.61 E-value=6.5e-05 Score=71.49 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=63.4
Q ss_pred CCcEEEECCChHHHHHHHHhh-c---CCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEe
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S---FADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSI 90 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~---g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 90 (368)
..+++|||+|+.|+-+|..|+ . |.+|+++++.+.+... + .+........... ..+++++.. .+..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---~----d~~~~~~l~~~l~--~~GV~i~~~~~v~~i 257 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---F----DSELRKQLTEQLR--ANGINVRTHENPAKV 257 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---S----CHHHHHHHHHHHH--HTTEEEEETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---c----CHHHHHHHHHHHH--hCCCEEEeCCEEEEE
Confidence 468999999999999999886 5 9999999998764311 0 1111100000011 126666544 44444
Q ss_pred ec-----cEEEecCCeEEEecEEEEecCCCCCCCC
Q 017664 91 TD-----TEVVTAGGQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 91 ~~-----~~v~~~~g~~~~~d~lvlAtG~~~~~p~ 120 (368)
.. ..+.+.+|+.+.+|.|++|+|..|+...
T Consensus 258 ~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~ 292 (490)
T 1fec_A 258 TKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQT 292 (490)
T ss_dssp EECTTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred EEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccc
Confidence 32 1566778888999999999999987653
No 280
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.61 E-value=0.00048 Score=66.96 Aligned_cols=97 Identities=22% Similarity=0.227 Sum_probs=68.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhh----CCCCeEEEEecCccccc-------------------------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVD----FPDKKVILVHRGPKLLE------------------------------------- 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~----~~~~~v~~i~~~~~~l~------------------------------------- 178 (368)
..|+|||+|++|+-+|..|++. .++.+|.++++.+.+..
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4689999999999888888763 22678888886532100
Q ss_pred --------cc---Cc--------------hhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEcC------CC---
Q 017664 179 --------FV---GS--------------RASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIETS------SG--- 220 (368)
Q Consensus 179 --------~~---~~--------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~~------~g--- 220 (368)
.+ +. .+.+.+.+.+++.|++++.++.+.++..++ + .|.+. +|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 00 234556677788899999999999887654 3 35554 33
Q ss_pred ------cEEecCEEEEccCCCC
Q 017664 221 ------ETIDTDCHFMCTGKAM 236 (368)
Q Consensus 221 ------~~i~~d~vi~a~G~~p 236 (368)
.++.+|+||.|.|...
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTC
T ss_pred cccCCceEEECCEEEEeeCCCc
Confidence 6899999999999764
No 281
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.60 E-value=0.00029 Score=66.74 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=65.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc----------------------------cc--c--------C
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL----------------------------EF--V--------G 181 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l----------------------------~~--~--------~ 181 (368)
.+++|||+|+.|+.+|..+++ .+.+|+++++++.+. .. . +
T Consensus 6 ~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 6 HDVVIIGGGPAGYVAAIKAAQ--LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 479999999999999999986 378999999854321 00 0 0
Q ss_pred c-h-----------hHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCC--cE------EecCEEEEccCCCC
Q 017664 182 S-R-----------ASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSG--ET------IDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ~-~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g--~~------i~~d~vi~a~G~~p 236 (368)
. . +...+.+.+++.||+++.++.+.. +++ .+.+.+| ++ +.+|.+|+|||..|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0 0 111134566788999999987642 333 5666676 56 99999999999886
No 282
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.60 E-value=0.00048 Score=65.50 Aligned_cols=93 Identities=16% Similarity=0.254 Sum_probs=65.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc----------------------------cc---------C
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE----------------------------FV---------G 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~----------------------------~~---------~ 181 (368)
..+++|||+|+.|+.+|..+++ .+.+|+++++++.+.. .+ +
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~--~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQ--LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHH--CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 3689999999999999999986 4889999998654310 00 0
Q ss_pred ------------chhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCC--cEEecCEEEEccCCCC
Q 017664 182 ------------SRASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSG--ETIDTDCHFMCTGKAM 236 (368)
Q Consensus 182 ------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g--~~i~~d~vi~a~G~~p 236 (368)
..+...+...+++.+++++.+.... .+.+ .+.+.+| +++.+|.+|+|||..|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 0011223445677899998877432 2233 5667777 5799999999999876
No 283
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.59 E-value=0.00018 Score=68.10 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=66.3
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc--------------------------------------cC
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF--------------------------------------VG 181 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~--------------------------------------~~ 181 (368)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.+.+... .+
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~--~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQ--LGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 479999999999999999986 37899999988632100 00
Q ss_pred -ch-----------hHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCC-C-cEEecCEEEEccCCCCCc
Q 017664 182 -SR-----------ASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSS-G-ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 182 -~~-----------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~-g-~~i~~d~vi~a~G~~p~~ 238 (368)
+. +...+.+.+++.|++++.++.+. +....-.+.+.+ + +++.+|.+|+|||.+|..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI-TGKNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-EETTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 00 11113456778899999887532 321111566666 4 579999999999988754
No 284
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.59 E-value=5.2e-05 Score=76.49 Aligned_cols=42 Identities=29% Similarity=0.361 Sum_probs=36.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeec
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITW 54 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~ 54 (368)
....++|+|||||++||++|+.|. +|++|+|+|+.+.+|+..
T Consensus 275 ~~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 275 TKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 345689999999999999999998 599999999999887653
No 285
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.58 E-value=0.00014 Score=68.76 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=66.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------cc---------------------------cCc-
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------EF---------------------------VGS- 182 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~~---------------------------~~~- 182 (368)
.+++|||+|+.|+.+|..+++ .+.+|+++++.. +. |. .+.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~--~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQ--LGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYG 80 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHH
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHH
Confidence 369999999999999999986 478999999862 10 00 000
Q ss_pred -----------hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCCC--cEEecCEEEEccCCCCCc
Q 017664 183 -----------RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSG--ETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 183 -----------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~g--~~i~~d~vi~a~G~~p~~ 238 (368)
.+...+.+.+++.|++++.++.+. + +++ .+.+.+| +++.+|.+|+|+|..|..
T Consensus 81 ~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 81 IAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-A--DANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-S--SSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 011123456778899999988653 2 333 5666777 689999999999988753
No 286
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.55 E-value=3.7e-05 Score=74.77 Aligned_cols=35 Identities=29% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYF 50 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~ 50 (368)
.+||||||||+||++||..|+ +|.+|+|+||.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 579999999999999999998 49999999998653
No 287
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.53 E-value=0.00018 Score=71.18 Aligned_cols=85 Identities=19% Similarity=0.250 Sum_probs=63.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------cccC--chhHHHHHHHHHcCCcEEEecceeee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------EFVG--SRASQIALDWLTSKKVEVILNQSVTL 207 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~~~~--~~~~~~~~~~l~~~gv~i~~~~~v~~ 207 (368)
.++++|||+|+.|+.+|..+.+ .+.+|+++++++.+. +... .+....+.+.+++.|++++.++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~--~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAA--RGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH
Confidence 3689999999999999999985 578999999876542 1111 12334566777888999999987642
Q ss_pred cccCCCeEEcCCCcEE-ecCEEEEccCCCCCc
Q 017664 208 NTISDGLIETSSGETI-DTDCHFMCTGKAMAS 238 (368)
Q Consensus 208 i~~~~~~v~~~~g~~i-~~d~vi~a~G~~p~~ 238 (368)
. .+ .+|.+|+|||.+|..
T Consensus 451 ~-------------~~~~~d~lviAtG~~p~~ 469 (671)
T 1ps9_A 451 D-------------QLQAFDETILASGIVPRT 469 (671)
T ss_dssp S-------------SSCCSSEEEECCCEEECC
T ss_pred H-------------HhhcCCEEEEccCCCcCC
Confidence 1 13 899999999988764
No 288
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.52 E-value=3.9e-05 Score=73.43 Aligned_cols=53 Identities=17% Similarity=0.245 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHcCCcEEEecceeeecccCC-C---eEEcCCCcEEecCEEEEccCCCC
Q 017664 183 RASQIALDWLTSKKVEVILNQSVTLNTISD-G---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 183 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
.+...+.+.+++.|++++.+ +|+.++.++ + .+.+.+|+++++|.||.|+|...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 56677778888899999999 898887643 3 57788888899999999999763
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.51 E-value=0.00036 Score=66.90 Aligned_cols=94 Identities=16% Similarity=0.213 Sum_probs=66.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------------------------------ccc------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------------------------------EFV------ 180 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------------------------------~~~------ 180 (368)
.+++|||+|+.|+.+|..+++ .+.+|+++++++.+. +..
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~--~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRA--MGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 579999999999999999986 378999999887321 000
Q ss_pred CchhHHHH----H---HHH-----HcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 181 GSRASQIA----L---DWL-----TSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 181 ~~~~~~~~----~---~~l-----~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
...+...+ . +.+ ++.|+++++...+..+.. ..+.+. ++++.+|.+|+|||.+|..
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~ 188 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGT 188 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCC
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCC
Confidence 01111222 2 455 778999986666665543 356665 6789999999999988754
No 290
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.51 E-value=6.9e-05 Score=72.67 Aligned_cols=55 Identities=5% Similarity=-0.052 Sum_probs=42.2
Q ss_pred CchhHHHHHHHHHcCCcEEEecceeeecccCCC---eEEcC---CC--cEEecCEEEEccCCC
Q 017664 181 GSRASQIALDWLTSKKVEVILNQSVTLNTISDG---LIETS---SG--ETIDTDCHFMCTGKA 235 (368)
Q Consensus 181 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~~---~g--~~i~~d~vi~a~G~~ 235 (368)
+..+...+.+.+++.|++++++++|+.+..+++ .+++. +| .++.+|.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 345666777888899999999999999877655 35432 33 379999999999965
No 291
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.50 E-value=0.00028 Score=66.89 Aligned_cols=95 Identities=23% Similarity=0.295 Sum_probs=65.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc-----------------------------c-------cC-
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-----------------------------F-------VG- 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~-----------------------------~-------~~- 181 (368)
..+++|||+|+.|+.+|..+.+ .+.+|+++++.. +.. . ++
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~--~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAE--LGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 4689999999999999999986 488999999763 100 0 00
Q ss_pred -----------chhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCCCc
Q 017664 182 -----------SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 182 -----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+...+...+++.|++++.+.. ..+......+. .+++++.+|.+|+|||.+|..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~ 162 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHA-AFTSDPKPTIE-VSGKKYTAPHILIATGGMPST 162 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCE-EECSCSSCEEE-ETTEEEECSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEE-EEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCC
Confidence 01122334556778999998763 32222222455 566789999999999987754
No 292
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.49 E-value=5.4e-05 Score=73.95 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+||||||||+|||+||..|+ +|.+|+||||...
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~ 52 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFP 52 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 4579999999999999999998 5999999999864
No 293
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.49 E-value=8.8e-05 Score=72.94 Aligned_cols=46 Identities=9% Similarity=0.070 Sum_probs=34.2
Q ss_pred CCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCC
Q 017664 260 ENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGR 306 (368)
Q Consensus 260 ~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~ 306 (368)
.+++| +.|++||+|||+.......+..+.-+|++++.++..++...
T Consensus 446 ~~~~t-~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 446 YNRMT-TVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp CTTBC-SSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCC-ccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhhC
Confidence 56677 79999999999854332235667778999999988887554
No 294
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.49 E-value=4e-05 Score=75.68 Aligned_cols=34 Identities=24% Similarity=0.366 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc------CCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS------FADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~------g~~v~lie~~~~ 49 (368)
++||+||||||+||++|..|++ |.+|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 5799999999999999999865 999999998764
No 295
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.48 E-value=8.6e-05 Score=70.53 Aligned_cols=96 Identities=23% Similarity=0.286 Sum_probs=63.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEE-eEEEEeecc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVV-STAVSITDT 93 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 93 (368)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+... + .+.+.........+ .+++++. ..+..+...
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---~----~~~~~~~l~~~l~~--~Gv~i~~~~~V~~i~~~ 261 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN---F----DYDLRQLLNDAMVA--KGISIIYEATVSQVQST 261 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---S----CHHHHHHHHHHHHH--HTCEEESSCCEEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc---c----CHHHHHHHHHHHHH--CCCEEEeCCEEEEEEee
Confidence 568999999999999999887 49999999998754211 0 11110000000011 1555554 244444432
Q ss_pred ----EEEecCCeEEEecEEEEecCCCCCCCC
Q 017664 94 ----EVVTAGGQTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 94 ----~v~~~~g~~~~~d~lvlAtG~~~~~p~ 120 (368)
.+.+.+|+.+.+|.+++|+|..|..+.
T Consensus 262 ~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 262 ENCYNVVLTNGQTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp SSSEEEEETTSCEEEESEEEECCCEEECCTT
T ss_pred CCEEEEEECCCcEEEcCEEEEeeCCCcCCCC
Confidence 577778888999999999999987654
No 296
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.48 E-value=7e-05 Score=73.66 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
..+||||||||.|||+||..|++ |.+|+||||.+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 35799999999999999999984 999999999865
No 297
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.44 E-value=7.6e-05 Score=72.77 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=39.0
Q ss_pred CCcEEeCCCeeecCCCCeEEecccCC--CCc-----cchHHHHHHHHHHHHHHHHHHHc
Q 017664 253 RGRLMVDENLRVRGFKNVFAIGDITD--IPE-----IKQGYLAQKHALVTAKNLKKLMM 304 (368)
Q Consensus 253 ~g~i~vd~~~~~~~~~~ifa~GD~~~--~~~-----~~~~~~a~~~g~~aa~~i~~~l~ 304 (368)
.|.|.||.+.|+ ..|++||+|+|++ ... ......+.-.|+.|++++++.+.
T Consensus 359 ~GGi~vd~~~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 359 MGGIETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp CCEEECCTTSBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCcc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 488999999999 7999999999973 211 11234577789999999988763
No 298
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.44 E-value=9.8e-05 Score=73.36 Aligned_cols=87 Identities=24% Similarity=0.281 Sum_probs=66.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------cc--cCchhHHHHHHHHHcC-CcEEEecceee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------EF--VGSRASQIALDWLTSK-KVEVILNQSVT 206 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------~~--~~~~~~~~~~~~l~~~-gv~i~~~~~v~ 206 (368)
.++|+|||+|+.|+.+|..|+++ +.+|+++++++.+. +. ....+...+.+.+++. |++++.++.+.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~--G~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 468 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR--GYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMT 468 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCCCC
T ss_pred cceEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCeec
Confidence 46899999999999999999974 88999999876432 11 1234556677788887 99999887653
Q ss_pred ecccCCCeEEcCCCcEEecCEEEEccCCCCC
Q 017664 207 LNTISDGLIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 207 ~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
. .+++++.+|.+|+|||..|.
T Consensus 469 ~----------~~~~~~~~d~lvlAtG~~~~ 489 (690)
T 3k30_A 469 G----------DDIVEFGFEHVITATGATWR 489 (690)
T ss_dssp H----------HHHHHTTCCEEEECCCEEEC
T ss_pred H----------HHHhhcCCCEEEEcCCCccc
Confidence 2 23346789999999998853
No 299
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.44 E-value=0.00059 Score=62.86 Aligned_cols=93 Identities=19% Similarity=0.177 Sum_probs=65.6
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------cCchh-----------------------------
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------VGSRA----------------------------- 184 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------~~~~~----------------------------- 184 (368)
+|+|||+|++|+-+|..|.+ .|.+|+++++.+.+... +.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~--~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK--HGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEE
T ss_pred EEEEECcCHHHHHHHHHHHh--CCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeE
Confidence 79999999999999999986 48899999876432110 00000
Q ss_pred ------------------------------HHHHHHHHH-cCCcEEEecceeeecccCC-C--eEEcCCCcEEecCEEEE
Q 017664 185 ------------------------------SQIALDWLT-SKKVEVILNQSVTLNTISD-G--LIETSSGETIDTDCHFM 230 (368)
Q Consensus 185 ------------------------------~~~~~~~l~-~~gv~i~~~~~v~~i~~~~-~--~v~~~~g~~i~~d~vi~ 230 (368)
...+.+.|. ..+..++.+++++.++..+ + .+.+.||+++++|+||-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 81 YNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVG 160 (412)
T ss_dssp ECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred ecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEE
Confidence 011233332 2345678888888887543 3 68899999999999999
Q ss_pred ccCCC
Q 017664 231 CTGKA 235 (368)
Q Consensus 231 a~G~~ 235 (368)
|-|..
T Consensus 161 ADG~~ 165 (412)
T 4hb9_A 161 ADGSN 165 (412)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 99965
No 300
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.44 E-value=0.00039 Score=65.57 Aligned_cols=92 Identities=18% Similarity=0.247 Sum_probs=64.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc---------------------------cc---------cC--
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL---------------------------EF---------VG-- 181 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l---------------------------~~---------~~-- 181 (368)
.+++|||+|+.|+.+|..+.+ .+.+|+++++.. +. +. .+
T Consensus 6 ~DVvVIGaG~aGl~aA~~la~--~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (463)
T 4dna_A 6 YDLFVIGGGSGGVRSGRLAAA--LGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWA 82 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHH
T ss_pred CcEEEECcCHHHHHHHHHHHh--CCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHH
Confidence 479999999999999999985 488999999842 10 00 00
Q ss_pred ----------chhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc-CCCcEEecCEEEEccCCCCC
Q 017664 182 ----------SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 182 ----------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~-~~g~~i~~d~vi~a~G~~p~ 237 (368)
..+...+.+.+++.|++++.+. +..+ +...+.+ .+++++.+|.+|+|||..|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDTR-AELA--GPNTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESC-EEES--SSSEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEe--eCCEEEEecCCeEEEeCEEEEecCCCcc
Confidence 0122234455677899999873 3333 2336666 57789999999999998776
No 301
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.41 E-value=0.00028 Score=64.71 Aligned_cols=88 Identities=15% Similarity=0.203 Sum_probs=65.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc----------------------c-cc-----------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL----------------------L-EF----------------- 179 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~----------------------l-~~----------------- 179 (368)
.+|+|||+|+.|+.+|..|.+..++.+|+++++.+.. . ..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3699999999999999999976568999999986543 0 00
Q ss_pred ---------------cCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCcEEecCEEEEccCCCC
Q 017664 180 ---------------VGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 180 ---------------~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
....+.+.+.+.+++.|++++++++|+.++.. +++++|.||.|.|...
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~---------~~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL---------PLADYDLVVLANGVNH 143 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC---------CGGGCSEEEECCGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc---------ccccCCEEEECCCCCc
Confidence 00123455667777889999999999877642 1357888888888653
No 302
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.39 E-value=0.00042 Score=65.10 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
.++|+|+|+|-.|...|..|. .|++|++||+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 467999999999999999997 5999999999864
No 303
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.39 E-value=0.0011 Score=63.68 Aligned_cols=36 Identities=22% Similarity=0.454 Sum_probs=31.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhC-CCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDF-PDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~-~~~~v~~i~~~~ 174 (368)
..+|+|||+|.+|+-+|..|++.. .+.+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 468999999999999999999643 588999999854
No 304
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.39 E-value=0.00038 Score=64.52 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=68.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCe-EEEEecCcccccc-----------------------------------cC-
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKK-VILVHRGPKLLEF-----------------------------------VG- 181 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~-v~~i~~~~~~l~~-----------------------------------~~- 181 (368)
..+|+|||+|++|+-+|..|.+ .+.+ |+++++.+.+.+. .+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~--~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQ--AGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCeEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 3579999999999999999986 4788 9999986532100 00
Q ss_pred -------------------------chhHHHHHHHHHc-CC-cEEEecceeeecccCCC-eEEcCC---C--cEEecCEE
Q 017664 182 -------------------------SRASQIALDWLTS-KK-VEVILNQSVTLNTISDG-LIETSS---G--ETIDTDCH 228 (368)
Q Consensus 182 -------------------------~~~~~~~~~~l~~-~g-v~i~~~~~v~~i~~~~~-~v~~~~---g--~~i~~d~v 228 (368)
..+.+.+.+.+++ .| ++++.+++|+.++.+++ .+.+.+ | +++++|+|
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTSCEEEEEESEE
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCCCceEEecCEE
Confidence 0233445566655 35 68999999998876333 555554 7 57999999
Q ss_pred EEccCCCC
Q 017664 229 FMCTGKAM 236 (368)
Q Consensus 229 i~a~G~~p 236 (368)
|.|.|...
T Consensus 162 V~AdG~~S 169 (410)
T 3c96_A 162 VGADGIHS 169 (410)
T ss_dssp EECCCTTC
T ss_pred EECCCccc
Confidence 99999764
No 305
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.38 E-value=0.0002 Score=68.08 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=58.8
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEE-eEEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVV-STAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 92 (368)
..+++|||+|+.|+.+|..|+ .|.+|+++++.+.+.... .+.+......... ..++++. ..+..+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~-------d~~~~~~l~~~l~---~~V~i~~~~~v~~i~~~ 243 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANLQ-------DEEMKRYAEKTFN---EEFYFDAKARVISTIEK 243 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTCC-------CHHHHHHHHHHHH---TTSEEETTCEEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccccC-------CHHHHHHHHHHHh---hCcEEEECCEEEEEEEc
Confidence 578999999999999999998 499999999998653110 1111000000000 0133331 22333321
Q ss_pred -c--EEEec--CC--eEEEecEEEEecCCCCCCCC
Q 017664 93 -T--EVVTA--GG--QTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 -~--~v~~~--~g--~~~~~d~lvlAtG~~~~~p~ 120 (368)
. .+.+. +| ..+.+|.|++|+|..|..+.
T Consensus 244 ~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 244 EDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp SSSEEEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred CCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 1 34443 56 68999999999999987664
No 306
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.37 E-value=8e-05 Score=71.65 Aligned_cols=37 Identities=22% Similarity=0.354 Sum_probs=33.3
Q ss_pred CCCCcEEEECCChHHHHHHHHhhcCCcEEEEcCCCce
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEYF 50 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~~~ 50 (368)
...+|+||||||+||+.+|.+|..+.+|+|+|+++..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 3468999999999999999999889999999999753
No 307
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.36 E-value=0.0007 Score=64.04 Aligned_cols=95 Identities=15% Similarity=0.185 Sum_probs=65.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc----------------------------------cccc-----
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL----------------------------------LEFV----- 180 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~----------------------------------l~~~----- 180 (368)
..++|||+|+.|+.+|..+++. +.+|+++++++.+ +..+
T Consensus 4 ~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 4 FDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999864 7899999987510 0000
Q ss_pred ----C------------chhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCC--cEEecCEEEEccCCCCC
Q 017664 181 ----G------------SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSG--ETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 181 ----~------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g--~~i~~d~vi~a~G~~p~ 237 (368)
+ ..+...+...+++.|++++.+.... +....-.+.+.+| +++.+|.+|+|||.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~-~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL-LAGKKVEVTAADGSSQVLDTENVILASGSKPV 155 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE-CSTTCEEEECTTSCEEEECCSCEEECCCEEEC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEcCCCceEEEEcCEEEEcCCCCCC
Confidence 0 0011122345667899999887543 2222116677777 57999999999998865
No 308
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.35 E-value=0.00039 Score=66.61 Aligned_cols=96 Identities=20% Similarity=0.094 Sum_probs=62.9
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc--------ccc---------c------------------------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP--------KLL---------E------------------------ 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~--------~~l---------~------------------------ 178 (368)
..++|||+|+.|+.+|..+++ .+.+|+++++.+ .+. |
T Consensus 33 ~DVvVIGgGpaGl~aA~~la~--~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 33 YDLIIIGGGSGGLAAAKEAAQ--YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 479999999999999999986 488999999742 000 0
Q ss_pred ----ccCc------------hhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcCCCc--EEecCEEEEccCCCCCc
Q 017664 179 ----FVGS------------RASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGE--TIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 179 ----~~~~------------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~~g~--~i~~d~vi~a~G~~p~~ 238 (368)
..+. .+...+...+++.+|+++.+. ...+....-.+.+.+|+ ++.+|.+|+|||.+|..
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~ 187 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRY 187 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCC
Confidence 0000 001112234667899998765 33222221156666664 79999999999988754
No 309
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.33 E-value=0.00013 Score=70.13 Aligned_cols=36 Identities=36% Similarity=0.549 Sum_probs=31.7
Q ss_pred CCCcEEEECCChHHHHHHHHhh--cCCcEEEEcCCCce
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ--SFADVVLIDEKEYF 50 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~--~g~~v~lie~~~~~ 50 (368)
..+|+||||||+||+.+|.+|. .+++|+|+|+++..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 3699999999999999999997 37899999998653
No 310
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.30 E-value=0.00015 Score=69.87 Aligned_cols=60 Identities=15% Similarity=0.054 Sum_probs=43.0
Q ss_pred HHHHH-HcCCcEEEecceeeecccCCC---eEEcCC---Cc--EE---ecCEEEEccCCCCCchhhhccccc
Q 017664 188 ALDWL-TSKKVEVILNQSVTLNTISDG---LIETSS---GE--TI---DTDCHFMCTGKAMASSWLRETILK 247 (368)
Q Consensus 188 ~~~~l-~~~gv~i~~~~~v~~i~~~~~---~v~~~~---g~--~i---~~d~vi~a~G~~p~~~~~~~~~l~ 247 (368)
+.+.+ ++.|+++++++.|+++..+++ .|++.+ |+ ++ .++.||+|+|....+.++..++++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 34444 456999999999999987655 555543 53 34 799999999986556676666653
No 311
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.27 E-value=0.0002 Score=67.94 Aligned_cols=95 Identities=17% Similarity=0.127 Sum_probs=58.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEeec-
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSITD- 92 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 92 (368)
..+++|||+|+.|+-+|..|+ .|.+|+++++...+. .+ .+........... ..+++++.. .+..+..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~----~~----d~~~~~~l~~~l~--~~Gv~i~~~~~v~~i~~~ 256 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR----GF----DQQMAELVAASME--ERGIPFLRKTVPLSVEKQ 256 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST----TS----CHHHHHHHHHHHH--HTTCCEEETEEEEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc----cc----CHHHHHHHHHHHH--hCCCEEEeCCEEEEEEEc
Confidence 468999999999999999987 499999999853221 00 1111000000001 125666544 3444432
Q ss_pred --c--EEEecCC-----eEEEecEEEEecCCCCCCCC
Q 017664 93 --T--EVVTAGG-----QTFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 93 --~--~v~~~~g-----~~~~~d~lvlAtG~~~~~p~ 120 (368)
. .+.+.++ ..+.+|.+++|+|..|..+.
T Consensus 257 ~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~ 293 (483)
T 3dgh_A 257 DDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDD 293 (483)
T ss_dssp TTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGG
T ss_pred CCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCc
Confidence 1 3444443 27899999999999987654
No 312
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.27 E-value=0.00063 Score=70.04 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=67.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---c-----c----CchhHHHHHHHHHcC-CcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---F-----V----GSRASQIALDWLTSK-KVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---~-----~----~~~~~~~~~~~l~~~-gv~i~~~~~v 205 (368)
..+++|||+|+.|+.+|..+.+ .+.+|+++++.+.+.. . . ..++...+.+.+++. +++++.++.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~--~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V 205 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASR--SGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTV 205 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHh--CCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEE
Confidence 4679999999999999999986 4789999998765321 0 1 112334445566664 9999999988
Q ss_pred eecccCCC-----------eEEc------CCCcEEecCEEEEccCCCCCc
Q 017664 206 TLNTISDG-----------LIET------SSGETIDTDCHFMCTGKAMAS 238 (368)
Q Consensus 206 ~~i~~~~~-----------~v~~------~~g~~i~~d~vi~a~G~~p~~ 238 (368)
..+...+. .+.+ .++.++.+|.+|+|||..|..
T Consensus 206 ~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 206 FGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred EeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 77654321 1111 112378999999999987653
No 313
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.25 E-value=0.00029 Score=66.94 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=58.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccceeeeecccccccceeecccccCceeEEEe-EEEEee--
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIVVS-TAVSIT-- 91 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 91 (368)
..+++|||+|+.|+-+|..|+ .|.+|+++++...+. .+ ++.+......... ..+++++.. .+..+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~----~~----d~~~~~~l~~~l~--~~gv~~~~~~~v~~i~~~ 254 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR----GF----DQQMSSLVTEHME--SHGTQFLKGCVPSHIKKL 254 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----TS----CHHHHHHHHHHHH--HTTCEEEETEEEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc----cC----CHHHHHHHHHHHH--HCCCEEEeCCEEEEEEEc
Confidence 457999999999999999997 499999999864221 00 1111110000011 125666544 344443
Q ss_pred -cc--EEEecC---Ce--EEEecEEEEecCCCCCCCC
Q 017664 92 -DT--EVVTAG---GQ--TFVYDYVVVATGHVESVPK 120 (368)
Q Consensus 92 -~~--~v~~~~---g~--~~~~d~lvlAtG~~~~~p~ 120 (368)
.. .+.+.+ ++ .+.+|.+++|+|..|..+.
T Consensus 255 ~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 255 PTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp TTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred CCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 22 343333 54 4789999999999987654
No 314
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.22 E-value=0.00015 Score=71.42 Aligned_cols=35 Identities=26% Similarity=0.588 Sum_probs=32.1
Q ss_pred CCcEEEECCChHHHHHHHHhhc-C--------CcEEEEcCCC-ce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-F--------ADVVLIDEKE-YF 50 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g--------~~v~lie~~~-~~ 50 (368)
.++|+|||||++||+||+.|++ | ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 5789999999999999999974 6 9999999998 87
No 315
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.21 E-value=0.00024 Score=68.74 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=43.0
Q ss_pred HHHHHHHcCCcEEEecceeeecccC----CC---eEEc--CCCc--EEecC-EEEEccCCCCCchhhhccccc
Q 017664 187 IALDWLTSKKVEVILNQSVTLNTIS----DG---LIET--SSGE--TIDTD-CHFMCTGKAMASSWLRETILK 247 (368)
Q Consensus 187 ~~~~~l~~~gv~i~~~~~v~~i~~~----~~---~v~~--~~g~--~i~~d-~vi~a~G~~p~~~~~~~~~l~ 247 (368)
.+...+++.|+++++++.|+++..+ ++ +|+. .+|+ ++.+. -||+|+|.--.+.+|..+|++
T Consensus 232 yL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 232 WLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp HTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred HHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 3434456789999999999998765 33 4543 4564 56676 699999987556666666654
No 316
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.11 E-value=0.00034 Score=67.66 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=31.5
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-C-CcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-F-ADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g-~~v~lie~~~~ 49 (368)
+.+|+||||||.||+.+|.+|.. + .+|+|||+++.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 46999999999999999999984 4 79999999875
No 317
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.09 E-value=0.00022 Score=71.22 Aligned_cols=87 Identities=23% Similarity=0.242 Sum_probs=57.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccc---------ccC--chhHHHHHHHHHc------CCcEEEe
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE---------FVG--SRASQIALDWLTS------KKVEVIL 201 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~---------~~~--~~~~~~~~~~l~~------~gv~i~~ 201 (368)
.++|+|||+|+.|+.+|..|.+ .+.+|+++++.+.+.. ... ..+.+.+.+.++. .++++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~--~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i~~ 466 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLME--SGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLALG 466 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEEEe
Confidence 4689999999999999999986 4789999998765421 111 1122223333332 2566654
Q ss_pred cceeeecccCCCeEEcCCCcEEecCEEEEccCCCCC
Q 017664 202 NQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 202 ~~~v~~i~~~~~~v~~~~g~~i~~d~vi~a~G~~p~ 237 (368)
++. +.++++.++.+|.+|+|||..|.
T Consensus 467 ~~~----------v~~~~~~~~~~d~vviAtG~~~~ 492 (729)
T 1o94_A 467 QKP----------MTADDVLQYGADKVIIATGARWN 492 (729)
T ss_dssp CCC----------CCHHHHHTSCCSEEEECCCEEEC
T ss_pred CeE----------EehhhccccCCCEEEEcCCCCcc
Confidence 432 22334456889999999998753
No 318
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.01 E-value=0.00061 Score=66.23 Aligned_cols=56 Identities=11% Similarity=-0.043 Sum_probs=47.2
Q ss_pred CchhHHHHHHHHHcCCcEEEecceeeecccCC--C---eEEcCCCcEEecCEEEEccCCCC
Q 017664 181 GSRASQIALDWLTSKKVEVILNQSVTLNTISD--G---LIETSSGETIDTDCHFMCTGKAM 236 (368)
Q Consensus 181 ~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~--~---~v~~~~g~~i~~d~vi~a~G~~p 236 (368)
..++.+.+.+.+++.|.++++++.|.+|..++ + .+++.+|+++.||.||....+.|
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp 437 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLS 437 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBC
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcC
Confidence 34788899999999999999999999987665 4 56677899999999999776655
No 319
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.98 E-value=0.00057 Score=65.21 Aligned_cols=39 Identities=18% Similarity=0.337 Sum_probs=34.1
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCce
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYF 50 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~ 50 (368)
.+...+|++|||+|++|+.+|.+|. ++.+|+|+|++...
T Consensus 7 ~~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 7 ADGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CTTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 3456799999999999999999997 59999999998754
No 320
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.96 E-value=0.0049 Score=58.99 Aligned_cols=36 Identities=31% Similarity=0.576 Sum_probs=30.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhC----------CCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDF----------PDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~----------~~~~v~~i~~~~ 174 (368)
..+|+|||||+.|.-+|..|++.. .+.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 468999999999999999998622 578999999764
No 321
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.91 E-value=0.00056 Score=65.22 Aligned_cols=37 Identities=19% Similarity=0.357 Sum_probs=33.1
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCcee
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFE 51 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~ 51 (368)
..+|++|||+|++|+++|.+|. .+.+|+|+|+++.+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4689999999999999999997 599999999998654
No 322
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.87 E-value=0.0011 Score=64.69 Aligned_cols=32 Identities=22% Similarity=0.127 Sum_probs=29.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEK 47 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~ 47 (368)
..+++|||||+.|+-+|..|+ .|.+|+++++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 457999999999999999997 49999999987
No 323
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.87 E-value=0.00069 Score=65.81 Aligned_cols=36 Identities=22% Similarity=0.404 Sum_probs=32.4
Q ss_pred CCCcEEEECCChHHHHHHHHhhc--CCcEEEEcCCCce
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS--FADVVLIDEKEYF 50 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie~~~~~ 50 (368)
..+|+||||+|++|+++|.+|.+ +.+|+|+|++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56899999999999999999974 8999999998754
No 324
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.86 E-value=0.00046 Score=66.61 Aligned_cols=35 Identities=20% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHhhc--CCcEEEEcCCCce
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS--FADVVLIDEKEYF 50 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie~~~~~ 50 (368)
.+|+||||||.||+.+|.+|.. +.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999974 8999999998754
No 325
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.85 E-value=0.0041 Score=59.32 Aligned_cols=35 Identities=40% Similarity=0.564 Sum_probs=28.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC-CCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDF-PDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~-~~~~v~~i~~~~ 174 (368)
.+|+|||||.+|+-+|..|++.. .+.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 47999999999999999998632 478999999864
No 326
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.75 E-value=0.0092 Score=58.07 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHHHHHcCC-cEEEecceeeecccCCC---eEE---cCCCc--EEecCEEEEccCCC
Q 017664 186 QIALDWLTSKK-VEVILNQSVTLNTISDG---LIE---TSSGE--TIDTDCHFMCTGKA 235 (368)
Q Consensus 186 ~~~~~~l~~~g-v~i~~~~~v~~i~~~~~---~v~---~~~g~--~i~~d~vi~a~G~~ 235 (368)
..+.+.+++.| |+++.++.+.++..+++ .+. +.+|+ .+.++.||+|+|-.
T Consensus 138 ~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 138 HTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 34455666777 99999999998876655 232 36776 78999999999963
No 327
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.75 E-value=0.004 Score=58.77 Aligned_cols=52 Identities=21% Similarity=0.206 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCcEEEecceeeecccCCCe---EEc-CCCcEEecCEEEEccCCCCC
Q 017664 185 SQIALDWLTSKKVEVILNQSVTLNTISDGL---IET-SSGETIDTDCHFMCTGKAMA 237 (368)
Q Consensus 185 ~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---v~~-~~g~~i~~d~vi~a~G~~p~ 237 (368)
...+.+.+++.|++++.++.+ ++..+++. +.. .++.++.+|.||+|||..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 344556667789999999999 88665552 333 22235789999999997653
No 328
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.69 E-value=0.0055 Score=60.15 Aligned_cols=95 Identities=24% Similarity=0.367 Sum_probs=68.0
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc--------------------------------------c---
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL--------------------------------------E--- 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l--------------------------------------~--- 178 (368)
.+|+|||+|++|+-+|..|++. .+.+|.++++.+... .
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~-~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAF-PDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-TTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CcEEEECcCHHHHHHHHHHHHh-CCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999841 588899998753210 0
Q ss_pred ---c----------------------cC-chhHHHHHHHHHcCCc--EEEecceeeecccCC-----C-eEEcC------
Q 017664 179 ---F----------------------VG-SRASQIALDWLTSKKV--EVILNQSVTLNTISD-----G-LIETS------ 218 (368)
Q Consensus 179 ---~----------------------~~-~~~~~~~~~~l~~~gv--~i~~~~~v~~i~~~~-----~-~v~~~------ 218 (368)
. .+ ..+...+.+.+++.|+ +++.+++++.++.++ . .+.+.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0 00 1234456677788876 999999999887654 2 34433
Q ss_pred CC--cEEecCEEEEccCCC
Q 017664 219 SG--ETIDTDCHFMCTGKA 235 (368)
Q Consensus 219 ~g--~~i~~d~vi~a~G~~ 235 (368)
+| +++.+|+||.|.|..
T Consensus 192 ~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp TTCEEEEEEEEEEECCCTT
T ss_pred CCCeEEEEeCEEEECCCcc
Confidence 45 579999999999965
No 329
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.63 E-value=0.0014 Score=63.16 Aligned_cols=36 Identities=22% Similarity=0.386 Sum_probs=32.3
Q ss_pred CCCcEEEECCChHHHHHHHHhhc--CCcEEEEcCCCce
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS--FADVVLIDEKEYF 50 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~--g~~v~lie~~~~~ 50 (368)
..+|++|||+|++|+++|.+|.+ +.+|+|+|+++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 46899999999999999999973 8999999999754
No 330
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.61 E-value=0.0058 Score=58.86 Aligned_cols=91 Identities=18% Similarity=0.302 Sum_probs=63.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccc------------------------------c-----------
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL------------------------------E----------- 178 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l------------------------------~----------- 178 (368)
.+|+|||+|++|+-+|..|.+ .+.+|+++++.+... +
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~--~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH--RQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 479999999999999999986 478899988754210 0
Q ss_pred ---c-----cC-------------c---------hhHHHHHHHHHcCCcEEEecceeeecccCCC--eEEcCC---C--c
Q 017664 179 ---F-----VG-------------S---------RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSS---G--E 221 (368)
Q Consensus 179 ---~-----~~-------------~---------~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~--~v~~~~---g--~ 221 (368)
. ++ + .+.+.+.+.+++. ++.+++++.++.+++ .+++.+ | +
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATR 181 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEE
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEE
Confidence 0 00 0 1223444555555 888999998887665 444443 6 4
Q ss_pred EEecCEEEEccCCC
Q 017664 222 TIDTDCHFMCTGKA 235 (368)
Q Consensus 222 ~i~~d~vi~a~G~~ 235 (368)
++.+|+||.|.|..
T Consensus 182 ~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 182 AVHARYLVACDGAS 195 (549)
T ss_dssp EEEEEEEEECCCTT
T ss_pred EEEeCEEEECCCCC
Confidence 79999999999965
No 331
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=96.51 E-value=0.0071 Score=56.68 Aligned_cols=37 Identities=30% Similarity=0.504 Sum_probs=30.8
Q ss_pred CeEEEEcCchhHHHHHHHHhhhC----CCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDF----PDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~----~~~~v~~i~~~~~~ 176 (368)
++|+|||+|.+|+-+|..|.++. ++.+|+++++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 57999999999999999999752 23899999987543
No 332
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.45 E-value=0.0095 Score=56.62 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=64.9
Q ss_pred eEEEEcCchhHHHHHHHHhhhC------------CCCeEEEEecCcccc-------cc----------------------
Q 017664 141 SVLIVGGGPTGVELAGEIAVDF------------PDKKVILVHRGPKLL-------EF---------------------- 179 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~------------~~~~v~~i~~~~~~l-------~~---------------------- 179 (368)
.|+|||+|++|+-+|..|.+.. .+....++++.+.+. +.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 5999999999999998887531 223456777655321 10
Q ss_pred --------------------c--CchhHHHHHHHHHcCCcEEEecceeeecccCCC----------eEEcCCC-----cE
Q 017664 180 --------------------V--GSRASQIALDWLTSKKVEVILNQSVTLNTISDG----------LIETSSG-----ET 222 (368)
Q Consensus 180 --------------------~--~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~----------~v~~~~g-----~~ 222 (368)
+ -.++.++++...++.+..++.+++|++++..+. .|++.++ ++
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 013444555555667777889999988864221 4554433 36
Q ss_pred EecCEEEEccCCCCCch
Q 017664 223 IDTDCHFMCTGKAMASS 239 (368)
Q Consensus 223 i~~d~vi~a~G~~p~~~ 239 (368)
+.++.+|+|+|..|..+
T Consensus 201 ~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EEEEEEEECCCCEECCC
T ss_pred EEeCEEEECcCCCCCCC
Confidence 88999999999877643
No 333
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=96.36 E-value=0.027 Score=54.64 Aligned_cols=49 Identities=12% Similarity=0.085 Sum_probs=36.5
Q ss_pred HHHHHHHHcCCcEEEecceeeecccC-CC---eEE---cCCCc--EEecCEEEEccCC
Q 017664 186 QIALDWLTSKKVEVILNQSVTLNTIS-DG---LIE---TSSGE--TIDTDCHFMCTGK 234 (368)
Q Consensus 186 ~~~~~~l~~~gv~i~~~~~v~~i~~~-~~---~v~---~~~g~--~i~~d~vi~a~G~ 234 (368)
..+.+.+++.||++++++.+.++..+ ++ .+. +.+|+ .+.++.||+|||-
T Consensus 147 ~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 147 HTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 33455666789999999999988764 44 333 25665 6899999999995
No 334
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.36 E-value=0.0038 Score=48.27 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+...+.+++|+|+|..|...|..|+ .|++|+++|+++.
T Consensus 3 ~~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3344568999999999999999997 5999999999863
No 335
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.28 E-value=0.017 Score=55.77 Aligned_cols=34 Identities=32% Similarity=0.409 Sum_probs=29.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
...|+|||+|.+|+-+|..++++ +.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r--G~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 45899999999999999999964 88999999764
No 336
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.15 E-value=0.0051 Score=48.40 Aligned_cols=39 Identities=36% Similarity=0.469 Sum_probs=31.4
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
|......+++|+|+|..|...|..|+ .|++|+++|+++.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 34445678999999999999999997 5999999998753
No 337
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.12 E-value=0.035 Score=55.57 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=33.9
Q ss_pred CCcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccC
Q 017664 195 KKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTG 233 (368)
Q Consensus 195 ~gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G 233 (368)
.|++|+++++|++|+.+++ .|.+.+|+++.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCC
Confidence 3789999999999987765 67788898999999999985
No 338
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.99 E-value=0.032 Score=54.34 Aligned_cols=49 Identities=8% Similarity=0.053 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCcEEEecceeeecccCCC---eEEc---CCCc--EEecCEEEEccCC
Q 017664 186 QIALDWLTSKKVEVILNQSVTLNTISDG---LIET---SSGE--TIDTDCHFMCTGK 234 (368)
Q Consensus 186 ~~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~~---~~g~--~i~~d~vi~a~G~ 234 (368)
..+.+.+++.||+++.++.+.++..+++ ++.. .+|+ .+.++.||+|||-
T Consensus 159 ~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 159 HTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 3445556678999999999988876555 3332 4665 6899999999995
No 339
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.94 E-value=0.0065 Score=46.86 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.+++|+|+|..|...|..|. +|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 468999999999999999997 599999999875
No 340
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.75 E-value=0.012 Score=46.06 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+.+++|+|+|..|...|..|. .|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3568999999999999999997 599999999974
No 341
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.73 E-value=0.033 Score=52.14 Aligned_cols=83 Identities=14% Similarity=0.084 Sum_probs=60.8
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET 217 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~ 217 (368)
.++++.|+|.|.+|+.+|..|.+ .|.+|+..+.++.. .....+.|++.|++++.+.....+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~--------~~~~~~~L~~~gi~~~~g~~~~~~~-------- 69 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFD--------ENPTAQSLLEEGIKVVCGSHPLELL-------- 69 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGG--------GCHHHHHHHHTTCEEEESCCCGGGG--------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCccc--------CChHHHHHHhCCCEEEECCChHHhh--------
Confidence 47899999999999999888875 58999999876531 1123456788899999876532110
Q ss_pred CCCcEEecCEEEEccCCCCCchhhh
Q 017664 218 SSGETIDTDCHFMCTGKAMASSWLR 242 (368)
Q Consensus 218 ~~g~~i~~d~vi~a~G~~p~~~~~~ 242 (368)
++ .+|.||+++|.+++.+.+.
T Consensus 70 -~~---~~d~vv~spgi~~~~p~~~ 90 (451)
T 3lk7_A 70 -DE---DFCYMIKNPGIPYNNPMVK 90 (451)
T ss_dssp -GS---CEEEEEECTTSCTTSHHHH
T ss_pred -cC---CCCEEEECCcCCCCChhHH
Confidence 00 2799999999988776554
No 342
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.011 Score=52.68 Aligned_cols=67 Identities=22% Similarity=0.192 Sum_probs=48.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc-------c-CchhHHHHHHHHHcCCcEEEeccee
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF-------V-GSRASQIALDWLTSKKVEVILNQSV 205 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~-------~-~~~~~~~~~~~l~~~gv~i~~~~~v 205 (368)
...|+|||+|+.|+-+|..|.++..+.+|+++++.+.+... + ...+...+.+.+++.|+++..+...
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~ 139 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDY 139 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcc
Confidence 56799999999999999999876679999999987653210 1 1122234456677889888776543
No 343
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.48 E-value=0.018 Score=49.14 Aligned_cols=42 Identities=14% Similarity=-0.043 Sum_probs=34.5
Q ss_pred CeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcCC
Q 017664 261 NLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGR 306 (368)
Q Consensus 261 ~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g~ 306 (368)
.+++ +.++||++||++..+ ....|+.+|+.||+.|++.|+++
T Consensus 289 ~~~~-~~~~v~l~GDa~~g~---gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 289 ALSD-ADLGIYVCGDWCLSG---RVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp SEEE-TTTTEEECCGGGTTS---SHHHHHHHHHHHHHHHHHHTTC-
T ss_pred ceee-CCCCEEEEecccCCc---CHHHHHHHHHHHHHHHHHHhhcc
Confidence 3455 679999999998654 36789999999999999999875
No 344
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.45 E-value=0.079 Score=52.00 Aligned_cols=48 Identities=13% Similarity=0.052 Sum_probs=34.7
Q ss_pred HHHHHHHcCCcEEEecceeeecccCCC---eEE---cCCCc--EEecCEEEEccCC
Q 017664 187 IALDWLTSKKVEVILNQSVTLNTISDG---LIE---TSSGE--TIDTDCHFMCTGK 234 (368)
Q Consensus 187 ~~~~~l~~~gv~i~~~~~v~~i~~~~~---~v~---~~~g~--~i~~d~vi~a~G~ 234 (368)
.+.+.+++.||+++.++.+.++..+++ .+. +.+|+ .+.++.||+|||-
T Consensus 163 ~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 163 AVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 344555667899999999988865544 332 25675 5899999999985
No 345
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.45 E-value=0.013 Score=44.71 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=29.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.++++|||+|..|...|..|. .|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 357999999999999999997 599999999865
No 346
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.44 E-value=0.03 Score=55.12 Aligned_cols=35 Identities=37% Similarity=0.561 Sum_probs=28.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhh---CCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVD---FPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~---~~~~~v~~i~~~~ 174 (368)
..|+|||+|++|+-+|..|++. ..+.+|.++++.+
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 3699999999999999999851 0478899998753
No 347
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.35 E-value=0.03 Score=53.64 Aligned_cols=32 Identities=41% Similarity=0.747 Sum_probs=26.4
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
..|+|||+|.+|+-+|..+++ +.+|.++++.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT---TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc---CCcEEEEECCC
Confidence 468999999999999988873 77888888764
No 348
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.35 E-value=0.05 Score=45.41 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=54.0
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET 217 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~ 217 (368)
.+++++|||+|.+|...+..|.+ .+.+|+++.+.. ...+.+..++.+++++....- .
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap~~----------~~~l~~l~~~~~i~~i~~~~~----~------- 86 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAPTV----------SAEINEWEAKGQLRVKRKKVG----E------- 86 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG--GCCCEEEECSSC----------CHHHHHHHHTTSCEEECSCCC----G-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCCC----------CHHHHHHHHcCCcEEEECCCC----H-------
Confidence 47999999999999999999986 478999987542 123455556667877643321 0
Q ss_pred CCCcEEecCEEEEccCCCCCchhh
Q 017664 218 SSGETIDTDCHFMCTGKAMASSWL 241 (368)
Q Consensus 218 ~~g~~i~~d~vi~a~G~~p~~~~~ 241 (368)
+.--.+|+||.||+-......+
T Consensus 87 --~dL~~adLVIaAT~d~~~N~~I 108 (223)
T 3dfz_A 87 --EDLLNVFFIVVATNDQAVNKFV 108 (223)
T ss_dssp --GGSSSCSEEEECCCCTHHHHHH
T ss_pred --hHhCCCCEEEECCCCHHHHHHH
Confidence 1112389999999876443333
No 349
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.31 E-value=0.069 Score=47.57 Aligned_cols=81 Identities=12% Similarity=-0.023 Sum_probs=58.8
Q ss_pred CCeEEEEcCchhHHH-HHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc
Q 017664 139 ANSVLIVGGGPTGVE-LAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET 217 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e-~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~ 217 (368)
.+++.++|.|-+|+. +|..|.+ .|.+|+..+..+.. . ..+.|++.|++++.+.....+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~--~G~~V~~~D~~~~~------~----~~~~L~~~gi~v~~g~~~~~l~~------- 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKE--AGFEVSGCDAKMYP------P----MSTQLEALGIDVYEGFDAAQLDE------- 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHH--TTCEEEEEESSCCT------T----HHHHHHHTTCEEEESCCGGGGGS-------
T ss_pred CcEEEEEEECHHHHHHHHHHHHh--CCCEEEEEcCCCCc------H----HHHHHHhCCCEEECCCCHHHcCC-------
Confidence 578999999999997 7777764 58999999876531 1 34567788999987754321100
Q ss_pred CCCcEEecCEEEEccCCCCCchhhhc
Q 017664 218 SSGETIDTDCHFMCTGKAMASSWLRE 243 (368)
Q Consensus 218 ~~g~~i~~d~vi~a~G~~p~~~~~~~ 243 (368)
-.+|.||.++|.+|+.+.+..
T Consensus 65 -----~~~d~vV~Spgi~~~~p~~~~ 85 (326)
T 3eag_A 65 -----FKADVYVIGNVAKRGMDVVEA 85 (326)
T ss_dssp -----CCCSEEEECTTCCTTCHHHHH
T ss_pred -----CCCCEEEECCCcCCCCHHHHH
Confidence 148999999999988766553
No 350
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.16 E-value=0.018 Score=42.49 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=29.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SF-ADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g-~~v~lie~~~ 48 (368)
+++++|+|+|..|...+..|. .| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999887 57 8999999874
No 351
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=94.95 E-value=0.027 Score=52.84 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=38.3
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeecc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWA 55 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~ 55 (368)
..|++.+||+|||+|.+|+++|..|+ +|.+|+++|+++.+|+...
T Consensus 15 ~~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 15 YFQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 45667899999999999999999997 5999999999998886543
No 352
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.91 E-value=0.024 Score=50.20 Aligned_cols=45 Identities=11% Similarity=0.042 Sum_probs=32.8
Q ss_pred eeccCCcCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 5 LWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 5 ~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
-|-...+...++++|.|||.|.-|...|..|. .|++|+++|+++.
T Consensus 10 ~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 10 HSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp --------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45555566667789999999999999999987 5999999998753
No 353
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.85 E-value=0.034 Score=44.85 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=30.3
Q ss_pred CCCcEEEECCChHHHHHHHHhh-c-CCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-S-FADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~-g~~v~lie~~~ 48 (368)
...+++|+|+|..|...|..|. . |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3568999999999999999997 6 99999999875
No 354
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.78 E-value=0.025 Score=43.37 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=29.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.+++|+|+|..|...|..|. .|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 457999999999999999997 599999999864
No 355
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.71 E-value=0.037 Score=46.27 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=30.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+.++|+|||||..|...+..|. .|.+|+|++++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34679999999999999999887 599999999864
No 356
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=94.35 E-value=0.015 Score=55.79 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=41.4
Q ss_pred EEeCCCeeecCCCCeEEecccCCCCccchHHHHHHHHHHHHHHHHHHHcC
Q 017664 256 LMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMG 305 (368)
Q Consensus 256 i~vd~~~~~~~~~~ifa~GD~~~~~~~~~~~~a~~~g~~aa~~i~~~l~g 305 (368)
|..|+++|+.+.+++|.|||+++... -...|..+|..+|+.|++.+.+
T Consensus 497 i~~~~~~~~~~~~gly~~GegaG~a~--gi~~Aa~~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 497 IKRGKDFQSVNLKGFYPAGEGAGYAG--GILSAGIDGIKVAEAVARDIVA 544 (549)
T ss_dssp CCCTTTTSCTTCBTEEECHHHHTSCC--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCceECCcCCEEEccccCChhh--HHHHHHHHHHHHHHHHHHHhhh
Confidence 67888999878999999999998755 5678999999999999988754
No 357
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.07 E-value=0.05 Score=47.38 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=31.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
|++..+|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 344578999999999999999887 5999999998863
No 358
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.02 E-value=0.034 Score=51.86 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+.++|+|||.|.+|+++|..|. +|++|++.|..+.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 3468999999999999998887 5999999998764
No 359
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=94.02 E-value=0.071 Score=50.32 Aligned_cols=38 Identities=21% Similarity=0.289 Sum_probs=34.6
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeec
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITW 54 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~ 54 (368)
+||+|||||++||+||+.|+ +|++|+|+|+++.+|+..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 79999999999999999998 499999999999887543
No 360
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.97 E-value=0.051 Score=49.62 Aligned_cols=34 Identities=26% Similarity=0.235 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+|+|||+|.+|+.+|..|+ .|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 568999999999999999887 4999999999863
No 361
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.91 E-value=0.053 Score=50.69 Aligned_cols=34 Identities=35% Similarity=0.289 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.++|.|||.|.+|+++|..|+ +|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4578999999999999999887 699999999876
No 362
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.85 E-value=0.059 Score=47.37 Aligned_cols=34 Identities=41% Similarity=0.506 Sum_probs=29.8
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 467999999999999999886 5999999998753
No 363
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.85 E-value=0.037 Score=46.07 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 18 KVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+|+|+|+|..|...|..|. +|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 6999999999999999997 5999999998753
No 364
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.77 E-value=0.034 Score=47.99 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.++|+|||||..|...+..|. .|++|+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4678999999999999999887 599999999764
No 365
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.61 E-value=0.059 Score=48.76 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=30.3
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~ 48 (368)
...+|+|||+|..|+.+|..|+. |.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999874 99999999875
No 366
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.56 E-value=0.077 Score=47.34 Aligned_cols=34 Identities=38% Similarity=0.494 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~ 49 (368)
+.+|.|||+|..|.+.|..|. +|+ +|+++|.++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 368999999999999999887 577 9999998763
No 367
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.48 E-value=0.054 Score=51.18 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=29.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
|+|+|||+|.+|+-+|..|++ .|.+|+++++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~--~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA--AGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHH--CCCcEEEEccCCCC
Confidence 689999999999999999986 48999999988764
No 368
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.38 E-value=0.066 Score=48.18 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=29.5
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+++++|.|||+|..|...|..|. .|++|+++++++
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34568999999999999999987 599999999874
No 369
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.18 E-value=0.15 Score=48.15 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=45.0
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccccccc----------C--------chhHHHHHHHHHcCCcEEE
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFV----------G--------SRASQIALDWLTSKKVEVI 200 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~----------~--------~~~~~~~~~~l~~~gv~i~ 200 (368)
.++|+|||+|.+|+.+|..|.+. +.+|+++++++++.... . +.....+.+.+++.|+++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 57899999999999999999864 78999999887653321 0 0113566778888888764
No 370
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.06 E-value=0.086 Score=47.67 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=30.6
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
....+|||+|||.||+.+|..|. .|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34679999999999999999886 488 999999974
No 371
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.95 E-value=0.091 Score=46.05 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=30.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
|+++++|.|||.|.-|...|..|. .|++|+++|+++.
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 344578999999999999999987 5999999998863
No 372
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.90 E-value=0.11 Score=46.14 Aligned_cols=36 Identities=42% Similarity=0.659 Sum_probs=30.6
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
|.++.+|.|||+|..|.+.|..|. .|+ +|+++|+++
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 334568999999999999999886 587 999999875
No 373
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.82 E-value=0.31 Score=46.00 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=56.9
Q ss_pred cCCeEEEEcCchhHHH-HHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEE
Q 017664 138 SANSVLIVGGGPTGVE-LAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIE 216 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e-~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~ 216 (368)
..+++.|+|-|-+|+. +|..|.+ .|.+|+..+.... ...+.|++.|++++.+.....+
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~--~G~~V~~~D~~~~-----------~~~~~l~~~gi~~~~g~~~~~~-------- 79 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLAN--EGYQISGSDLAPN-----------SVTQHLTALGAQIYFHHRPENV-------- 79 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHH--TTCEEEEECSSCC-----------HHHHHHHHTTCEEESSCCGGGG--------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHh--CCCeEEEEECCCC-----------HHHHHHHHCCCEEECCCCHHHc--------
Confidence 4689999999999996 7887775 5899998876532 1245678889999877543211
Q ss_pred cCCCcEEecCEEEEccCCCCCchhhh
Q 017664 217 TSSGETIDTDCHFMCTGKAMASSWLR 242 (368)
Q Consensus 217 ~~~g~~i~~d~vi~a~G~~p~~~~~~ 242 (368)
..+|.||+++|.+++.+.+.
T Consensus 80 ------~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 80 ------LDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp ------TTCSEEEECTTSCTTCHHHH
T ss_pred ------CCCCEEEECCCCCCCCHHHH
Confidence 13899999999988765543
No 374
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.63 E-value=0.17 Score=46.39 Aligned_cols=37 Identities=11% Similarity=0.180 Sum_probs=31.7
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
...+|+|||+|++|+-+|..|.+ .+.+|+++++.+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQ--SGIDCDVYEAVKEI 58 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCCCC
Confidence 35689999999999999999986 48899999998654
No 375
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.62 E-value=0.11 Score=46.20 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=29.3
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 58999999999999999997 499999999976
No 376
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.61 E-value=0.15 Score=47.53 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=31.1
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
...+|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4468999999999999999887 5999999999875
No 377
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.61 E-value=0.19 Score=45.94 Aligned_cols=57 Identities=21% Similarity=0.287 Sum_probs=40.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccC--chhHHHHHHHHHcCCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVG--SRASQIALDWLTSKKV 197 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~--~~~~~~~~~~l~~~gv 197 (368)
..+|+|||+|++|+.+|..|.+ .+.+|+++++.+....... -.+.....+.+++.|+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~ 63 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD--AGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGV 63 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHh--CCCCEEEEecCCCCCCccccccccChhHHHHHHHcCC
Confidence 4689999999999999999986 4899999998866322111 1123444556666665
No 378
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.55 E-value=0.13 Score=44.31 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=29.9
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRG 173 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~ 173 (368)
.+++|+|||+|.+|...+..|.+ .+.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~--~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP--TGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG--GTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh--CCCEEEEEcCC
Confidence 47899999999999999999985 48899999864
No 379
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.55 E-value=0.11 Score=46.98 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
+++|+|||||..|..+++.+++ |++++++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4689999999999999999985 999999998764
No 380
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.53 E-value=0.12 Score=46.10 Aligned_cols=35 Identities=29% Similarity=0.131 Sum_probs=29.2
Q ss_pred CCCcEEEECCChHHHH-HHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSL-LAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~-aA~~L~-~g~~v~lie~~~~ 49 (368)
.+++|.|||.|.+||+ +|..|. +|++|++.|.++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4568999999999997 666665 6999999998753
No 381
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.46 E-value=0.14 Score=45.53 Aligned_cols=35 Identities=37% Similarity=0.517 Sum_probs=29.6
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
+...+|.|||+|..|...|..|. +|+ +|+++|.++
T Consensus 2 ~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 2 APKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 34568999999999999999887 576 899999875
No 382
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.45 E-value=0.14 Score=46.10 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
++++|.|||+|.-|.+.|..|. .|++|+++++++.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3568999999999999999997 5899999999753
No 383
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.41 E-value=0.13 Score=45.57 Aligned_cols=36 Identities=36% Similarity=0.435 Sum_probs=30.2
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEY 49 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~ 49 (368)
++..+|.|||+|..|.+.|..|. +++ +++++|.++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 45678999999999999999886 566 9999998763
No 384
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.39 E-value=0.11 Score=47.60 Aligned_cols=34 Identities=32% Similarity=0.249 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+|+|||+|.+|+.++..++ .|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 568999999999999999887 4999999998753
No 385
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.32 E-value=0.52 Score=44.82 Aligned_cols=84 Identities=10% Similarity=-0.131 Sum_probs=57.3
Q ss_pred HHHhcCCeEEEEcCchhHHHH-HHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCC
Q 017664 134 EKVKSANSVLIVGGGPTGVEL-AGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISD 212 (368)
Q Consensus 134 ~~~~~~~~v~VvG~g~~~~e~-a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~ 212 (368)
......+++.++|-|-+|+-. |..|.+ .|.+|+..+.... + . ..+.|++.|++++.+.....+.
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~--~G~~V~~sD~~~~-----~-~----~~~~L~~~gi~~~~G~~~~~~~--- 78 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARA--LGHTVTGSDANIY-----P-P----MSTQLEQAGVTIEEGYLIAHLQ--- 78 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEESCCC-----T-T----HHHHHHHTTCEEEESCCGGGGC---
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHh--CCCEEEEECCCCC-----c-H----HHHHHHHCCCEEECCCCHHHcC---
Confidence 345568999999999999974 555553 5899999987642 1 1 3456778899998775432110
Q ss_pred CeEEcCCCcEEecCEEEEccCCCCCchhhh
Q 017664 213 GLIETSSGETIDTDCHFMCTGKAMASSWLR 242 (368)
Q Consensus 213 ~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~ 242 (368)
-.+|.||.++|..++.+.+.
T Consensus 79 ----------~~~d~vV~Spgi~~~~p~l~ 98 (524)
T 3hn7_A 79 ----------PAPDLVVVGNAMKRGMDVIE 98 (524)
T ss_dssp ----------SCCSEEEECTTCCTTSHHHH
T ss_pred ----------CCCCEEEECCCcCCCCHHHH
Confidence 14899999999988776554
No 386
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.30 E-value=0.12 Score=46.57 Aligned_cols=34 Identities=35% Similarity=0.410 Sum_probs=30.1
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEK 47 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~ 47 (368)
....+|+|+|||.+|..+|+.|. .|. +|+++|++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35679999999999999999887 487 89999997
No 387
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.28 E-value=0.12 Score=46.62 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=30.4
Q ss_pred CcCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 10 AAGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 10 ~~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+.|+++++|.|||.|.-|...|..|. .|++|+++++++
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 356777789999999999999999987 599999999875
No 388
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.25 E-value=0.14 Score=47.12 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=29.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.+|+|||+|++|+-+|..|++ .+.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~--~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK--SGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCCEEEEeCCC
Confidence 479999999999999999985 588999999875
No 389
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.19 E-value=0.13 Score=46.86 Aligned_cols=34 Identities=26% Similarity=0.243 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...+|+|||+|.+|+.++..++ .|.+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4578999999999999999887 499999999875
No 390
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.13 E-value=0.14 Score=46.40 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=66.8
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccc------cC---------------------------------
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF------VG--------------------------------- 181 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~------~~--------------------------------- 181 (368)
.|+|||+|++|+-+|..|++ .|.+|+++++.+.+... +.
T Consensus 6 DViIVGaGpaGl~~A~~La~--~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 58999999999999999996 48999999986532100 00
Q ss_pred ------------------chhHHHHHHHHHcCCcEEEecceeeecccCCCe---EE-cCCC--cEEecCEEEEccCCC
Q 017664 182 ------------------SRASQIALDWLTSKKVEVILNQSVTLNTISDGL---IE-TSSG--ETIDTDCHFMCTGKA 235 (368)
Q Consensus 182 ------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~---v~-~~~g--~~i~~d~vi~a~G~~ 235 (368)
..+...+.+.+++.|++++.++.+..+..+++. +. ..++ .++.+|+||-|.|..
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 112233556677889999999999887766652 22 2233 368999999999965
No 391
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.11 E-value=0.14 Score=45.61 Aligned_cols=32 Identities=13% Similarity=0.346 Sum_probs=28.9
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEK 47 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~ 47 (368)
.++|.|||+|.-|.+.|..|. .|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 458999999999999999997 58999999985
No 392
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=92.05 E-value=0.15 Score=48.96 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=31.4
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhC-CCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDF-PDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~-~~~~v~~i~~~~ 174 (368)
..+|+|||+|..|+-+|..|++.. .+.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 568999999999999999999744 688999999864
No 393
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.04 E-value=0.17 Score=44.63 Aligned_cols=37 Identities=19% Similarity=0.158 Sum_probs=31.1
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
++...+|.|||+|.-|...|..|. .|++|+++++++.
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 334578999999999999999887 5899999998753
No 394
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.94 E-value=0.1 Score=40.18 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
..+++|||+|..|...+..|. .|.+|+++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 568999999999999999887 588899999874
No 395
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.93 E-value=0.12 Score=45.52 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=28.6
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 57999999999999999997 589999999975
No 396
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.93 E-value=0.13 Score=45.13 Aligned_cols=32 Identities=34% Similarity=0.460 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 47999999999999999987 599999999875
No 397
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.92 E-value=0.22 Score=45.16 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=31.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
..+|+|||+|++|+.+|..|.+ .+.+|+++++.+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~--~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ--NGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--CCCCEEEEecCCCC
Confidence 4689999999999999999986 48899999987654
No 398
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.86 E-value=0.25 Score=47.76 Aligned_cols=35 Identities=26% Similarity=0.405 Sum_probs=30.8
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK 175 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~ 175 (368)
..+|+|||||++|+-+|..|++ .+.+|+++++.+.
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar--~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK--LGHDVTIYERSAF 57 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHc--CCCCEEEEcCCCC
Confidence 5789999999999999999986 4889999998753
No 399
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.85 E-value=0.18 Score=45.92 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=31.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
....++|+|||+|..|..++..+++ |++|.++|+++.
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 3456789999999999999999984 999999998653
No 400
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.84 E-value=0.091 Score=43.81 Aligned_cols=37 Identities=19% Similarity=0.228 Sum_probs=30.8
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEE-EcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVL-IDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~l-ie~~~~ 49 (368)
++++++|.|||+|.-|.+.|..|. .|++|++ +++++.
T Consensus 20 ~m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp GGGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred hhcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 344578999999999999999987 5999999 887653
No 401
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.74 E-value=0.16 Score=46.83 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHhhcCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~~ 49 (368)
.++|.|||+|..|+..|..|++|++|+++|+++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 4689999999999999998888999999998854
No 402
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.69 E-value=0.18 Score=41.63 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 468999999999999999987 5999999998764
No 403
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.67 E-value=0.19 Score=46.51 Aligned_cols=39 Identities=21% Similarity=0.043 Sum_probs=33.3
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
|.-.++.+|.|||.|+.||..|..|+ +|++|+.+|-++.
T Consensus 16 p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 16 PRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 44456779999999999999999887 6999999998753
No 404
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=91.59 E-value=0.2 Score=45.68 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++||+|||||+||+.||..|+ +|.+|+|+|+++
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 369999999999999999997 599999999876
No 405
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=91.50 E-value=0.2 Score=47.33 Aligned_cols=36 Identities=25% Similarity=0.408 Sum_probs=31.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
..|+|||+|.+|+-+|..|+++ .+.+|+++++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCC
Confidence 4699999999999999999863 58899999988765
No 406
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.48 E-value=0.19 Score=46.69 Aligned_cols=79 Identities=19% Similarity=0.130 Sum_probs=54.9
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET 217 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~ 217 (368)
.+++++|+|.|.+|+..|..|.+ .|.+|+..+...... .. ..++ .|++++.+..... .+
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~--~G~~v~~~D~~~~~~-----~~-----~~l~-~G~~~~~g~~~~~------~~-- 62 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLA--RGVTPRVMDTRMTPP-----GL-----DKLP-EAVERHTGSLNDE------WL-- 62 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHT--TTCCCEEEESSSSCT-----TG-----GGSC-TTSCEEESSCCHH------HH--
T ss_pred CCCEEEEEeecHHHHHHHHHHHh--CCCEEEEEECCCCcc-----hh-----HHhh-CCCEEEECCCcHH------Hh--
Confidence 46899999999999999988774 588999998765421 00 3345 7888876653210 00
Q ss_pred CCCcEEecCEEEEccCCCCCchhhh
Q 017664 218 SSGETIDTDCHFMCTGKAMASSWLR 242 (368)
Q Consensus 218 ~~g~~i~~d~vi~a~G~~p~~~~~~ 242 (368)
. .+|.||+++|.+|+.+.+.
T Consensus 63 ----~-~~d~vV~s~gi~~~~p~~~ 82 (439)
T 2x5o_A 63 ----M-AADLIVASPGIALAHPSLS 82 (439)
T ss_dssp ----H-TCSEEEECTTSCTTCHHHH
T ss_pred ----c-cCCEEEeCCCCCCCCHHHH
Confidence 1 3799999999887655444
No 407
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.46 E-value=0.17 Score=42.37 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=29.6
Q ss_pred CCCCCCcEEEECC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 12 GLVEKKKVVVIGG-GVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 12 ~~~~~~~vvIIGa-G~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...+.++|+|.|| |.-|...+..|. +|++|+++.+++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3445678999997 999999999886 699999999875
No 408
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.41 E-value=0.18 Score=44.56 Aligned_cols=33 Identities=36% Similarity=0.474 Sum_probs=29.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
+++|+|||+|..|.+.|..|. .|+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 358999999999999999887 577 999999875
No 409
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.40 E-value=0.15 Score=46.87 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+.+|+|||.|..|...|..|. .|.+|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 457999999999999999998 5999999999864
No 410
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.34 E-value=0.18 Score=45.59 Aligned_cols=33 Identities=36% Similarity=0.380 Sum_probs=29.5
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
..+|+|+|+|.+|++++..|+ .|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 478999999999999999887 589999999874
No 411
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=91.30 E-value=0.094 Score=48.69 Aligned_cols=45 Identities=22% Similarity=0.369 Sum_probs=39.0
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccce
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWASL 57 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~~ 57 (368)
|++.+|++|||||++|+++|..|+ +|.+|+|+|+++.+|+.....
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~ 48 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSI 48 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccccccc
Confidence 566789999999999999999998 499999999999888665443
No 412
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=91.26 E-value=0.21 Score=44.17 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=30.1
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK 175 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~ 175 (368)
.+|+|||+|++|+.+|..|.+ .+.+|+++++.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~--~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA--AGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH--CCCcEEEEECCCC
Confidence 479999999999999999986 4789999998764
No 413
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.25 E-value=0.19 Score=43.56 Aligned_cols=32 Identities=22% Similarity=0.118 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 18 KVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+|.|||+|..|.+.|..|. .|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 6999999999999999987 5999999998763
No 414
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=91.22 E-value=0.14 Score=46.19 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=28.7
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 38999999999999999987 489999999875
No 415
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.16 E-value=0.16 Score=44.37 Aligned_cols=32 Identities=34% Similarity=0.591 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
++|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 57999999999999999997 599999999974
No 416
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=91.13 E-value=0.31 Score=46.45 Aligned_cols=35 Identities=37% Similarity=0.524 Sum_probs=30.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
.+|+|||+|++|+-+|..|.+ .+.+|+++++.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~--~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR--QGVRVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--TTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 479999999999999999985 48899999988654
No 417
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.09 E-value=0.22 Score=46.49 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=39.4
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccc
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWAS 56 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~ 56 (368)
..|+..+||||||||++||+||..|+ +|++|+|+|+++.+|+....
T Consensus 6 ~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 6 ETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp -CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred hhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 34556789999999999999999998 49999999999999876544
No 418
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=91.07 E-value=0.26 Score=46.57 Aligned_cols=37 Identities=38% Similarity=0.690 Sum_probs=31.9
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
...+|+|||+|++|+-+|..|.+ .+.+|+++++.+..
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL--GGVDVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--TTCCEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCCCC
Confidence 35679999999999999999986 48999999987654
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.05 E-value=0.17 Score=44.88 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=29.7
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+..+|.|||+|.-|.+.|..|. .|++|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3468999999999999998886 5999999999864
No 420
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=91.04 E-value=0.3 Score=44.46 Aligned_cols=35 Identities=29% Similarity=0.347 Sum_probs=30.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
.+|+|||+|++|+.+|..|.+ .+.+|+++++.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~--~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR--QGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCCCC
Confidence 479999999999999999986 48899999987654
No 421
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.95 E-value=0.19 Score=44.33 Aligned_cols=34 Identities=26% Similarity=0.261 Sum_probs=29.0
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
.+++|.|||.|.-|...|..|. .|+ +|+++|+++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 3578999999999999999987 599 999999863
No 422
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.93 E-value=0.26 Score=42.59 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+++|+|.|+|+-|...+..|. +|++|+++.++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467999999999999999886 6999999998753
No 423
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.89 E-value=0.22 Score=43.82 Aligned_cols=32 Identities=34% Similarity=0.641 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHhhcCCcEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQSFADVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~ 48 (368)
++|.|||+|.-|.+.|..|..|.+|+++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 58999999999999999888889999999875
No 424
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.88 E-value=0.2 Score=46.98 Aligned_cols=36 Identities=22% Similarity=0.130 Sum_probs=31.4
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-c-CC-cEEEEcCCCc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-S-FA-DVVLIDEKEY 49 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~-g~-~v~lie~~~~ 49 (368)
...++|.|||+|.-|+..|..|. . |+ +|+++|+++.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34568999999999999999886 7 89 9999999875
No 425
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.87 E-value=0.58 Score=43.67 Aligned_cols=79 Identities=11% Similarity=-0.001 Sum_probs=53.5
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET 217 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~ 217 (368)
.+++++|||+|.+|...+..|.+ .+.+|+++.+... ..+.+..++.+++++.+..- .
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~--~ga~V~vi~~~~~----------~~~~~l~~~~~i~~~~~~~~----~------- 67 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLE--AGARLTVNALTFI----------PQFTVWANEGMLTLVEGPFD----E------- 67 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH--TTBEEEEEESSCC----------HHHHHHHTTTSCEEEESSCC----G-------
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CcCEEEEEcCCCC----------HHHHHHHhcCCEEEEECCCC----c-------
Confidence 47899999999999999999986 4889999986421 13344445567887754321 0
Q ss_pred CCCcEEecCEEEEccCCCC-Cchhh
Q 017664 218 SSGETIDTDCHFMCTGKAM-ASSWL 241 (368)
Q Consensus 218 ~~g~~i~~d~vi~a~G~~p-~~~~~ 241 (368)
+..-.+|+||.+||... |....
T Consensus 68 --~~l~~~~lVi~at~~~~~n~~i~ 90 (457)
T 1pjq_A 68 --TLLDSCWLAIAATDDDTVNQRVS 90 (457)
T ss_dssp --GGGTTCSEEEECCSCHHHHHHHH
T ss_pred --cccCCccEEEEcCCCHHHHHHHH
Confidence 11114899999999763 44333
No 426
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=90.85 E-value=0.27 Score=46.47 Aligned_cols=37 Identities=35% Similarity=0.649 Sum_probs=31.6
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
...+|+|||+|++|+-+|..|.+ .+.+|.++++.+..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~--~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRL--AGVEVVVLERLVER 46 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCCC-
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 45689999999999999999986 48999999987654
No 427
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=90.83 E-value=0.2 Score=45.22 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=29.6
Q ss_pred CCCcEEEECCChHHHHHHHHhhcCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~ 48 (368)
++++|+|+|||..|-.+|..|++.++|++.+++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~~~v~~~~~~~ 48 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDEFDVYIGDVNN 48 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred CccEEEEECCCHHHHHHHHHHhcCCCeEEEEcCH
Confidence 4568999999999999999999889999988764
No 428
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=90.82 E-value=0.3 Score=45.61 Aligned_cols=39 Identities=33% Similarity=0.557 Sum_probs=34.5
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CC--cEEEEcCCCceeeec
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FA--DVVLIDEKEYFEITW 54 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~--~v~lie~~~~~~~~~ 54 (368)
++||+|||||++||+||++|++ |. +|+|+|+++..|+..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 4699999999999999999985 88 999999998877543
No 429
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.82 E-value=0.23 Score=45.93 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=29.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.++|+|||+|+.|+-+|..|++ .+.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH--TTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH--CCCeEEEEcCCC
Confidence 4689999999999999999996 489999999765
No 430
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.81 E-value=0.22 Score=42.22 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=30.4
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
....++|.|||+|.-|.+.|..|. .|++|+++++++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 345678999999999999999987 5999999998753
No 431
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.75 E-value=0.22 Score=44.19 Aligned_cols=38 Identities=16% Similarity=0.038 Sum_probs=29.2
Q ss_pred cCCCCCCcEEEECCChHHHHHHHHhh-cC----CcEEEEcCCC
Q 017664 11 AGLVEKKKVVVIGGGVGGSLLAYHIQ-SF----ADVVLIDEKE 48 (368)
Q Consensus 11 ~~~~~~~~vvIIGaG~aGl~aA~~L~-~g----~~v~lie~~~ 48 (368)
+.++++++|.|||+|.-|.+.|..|. .| ++|+++++++
T Consensus 17 ~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 17 NLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -----CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred hhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34555668999999999999999987 47 7999999875
No 432
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.72 E-value=0.25 Score=43.59 Aligned_cols=33 Identities=42% Similarity=0.618 Sum_probs=29.4
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEK 47 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~ 47 (368)
+..+|.|||+|..|.+.|..|. .++ +|+++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4578999999999999999886 588 99999987
No 433
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.64 E-value=0.26 Score=45.26 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=30.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
++|+|||+|.+|+-+|..|.+ .+.+|+++++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR--NGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCCC
Confidence 379999999999999999986 47899999987654
No 434
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.64 E-value=0.19 Score=44.34 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=29.1
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+|.|||+|.-|...|..+. .|++|+++|.++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 458999999999999998765 6999999998864
No 435
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.60 E-value=0.15 Score=42.89 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=28.5
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..+.+++|+|+|..|...|..|. .|+ |+++|+++.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34568999999999999999997 488 999998753
No 436
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.58 E-value=0.07 Score=47.46 Aligned_cols=47 Identities=13% Similarity=0.275 Sum_probs=34.9
Q ss_pred ceeeeccCCcCCCCCCcEEEECCChHHHHHHHHhhc-CC-cEEEEcCCC
Q 017664 2 CVWLWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQS-FA-DVVLIDEKE 48 (368)
Q Consensus 2 ~~~~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~L~~-g~-~v~lie~~~ 48 (368)
-|++|....-..-+..+|+|||+|-.|..+|..|.+ |. +++|+|...
T Consensus 20 ~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 20 KWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 345554433233356799999999999999999985 64 799999764
No 437
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.58 E-value=0.21 Score=46.78 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=30.9
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-c--CCcEEEEcCCCc
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-S--FADVVLIDEKEY 49 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~--g~~v~lie~~~~ 49 (368)
|.++++|.|||.|..|+..|..|. . |++|+++|+++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 344468999999999999999886 5 799999998753
No 438
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.49 E-value=0.21 Score=41.42 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCCCcEEEECC-ChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGG-GVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGa-G~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.++++|+|.|| |..|...+..|. +|++|+++++++
T Consensus 2 ~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp -CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 34568999995 999999999886 599999999975
No 439
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.46 E-value=0.23 Score=46.31 Aligned_cols=33 Identities=27% Similarity=0.223 Sum_probs=29.7
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
++|.|||+|..|+..|..|. .|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 58999999999999999987 5999999998853
No 440
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.42 E-value=0.23 Score=46.70 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
.++|.|||+|..|+..|..|. .|++|+++|+++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 568999999999999999987 5999999998753
No 441
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.40 E-value=0.25 Score=41.97 Aligned_cols=33 Identities=21% Similarity=0.294 Sum_probs=29.2
Q ss_pred CCcEEEECCChHHHHHHHHhhc-CC-cEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQS-FA-DVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~~-g~-~v~lie~~~ 48 (368)
..+|+|||+|-.|..+|..|.+ |. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 5689999999999999999975 86 899999875
No 442
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=90.40 E-value=0.39 Score=46.23 Aligned_cols=35 Identities=31% Similarity=0.604 Sum_probs=30.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
..|+|||+|++|+-+|..|.+ .+.+|+++++.+..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~--~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA--GGVGALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH--TTCCEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEcCCCCC
Confidence 479999999999999999986 48899999987654
No 443
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.33 E-value=0.14 Score=45.27 Aligned_cols=44 Identities=16% Similarity=-0.007 Sum_probs=32.9
Q ss_pred eeccCCcCCCCCCcEEEECCChHHHHHHHHhh-cC-CcEEEEcCCC
Q 017664 5 LWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQ-SF-ADVVLIDEKE 48 (368)
Q Consensus 5 ~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~L~-~g-~~v~lie~~~ 48 (368)
+|......+...++|.|||.|.-|.+.|..|. .| ++|+++++++
T Consensus 13 ~~~~~~~~~~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 13 LGTENLYFQSMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp --CCCHHHHTSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred cCcccCcccccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 44443332233468999999999999999987 48 9999999875
No 444
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.27 E-value=0.3 Score=43.37 Aligned_cols=33 Identities=36% Similarity=0.411 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCc
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEY 49 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~ 49 (368)
.+|.|||+|..|.+.|..|. +|+ +|+++|.++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 58999999999999998887 577 8999998763
No 445
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.24 E-value=0.2 Score=46.75 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.++|+|||+|..|...+..|. .|.+|+|++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4578999999999999999887 599999999864
No 446
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.22 E-value=0.28 Score=40.64 Aligned_cols=34 Identities=29% Similarity=0.221 Sum_probs=28.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+..+|.|||+|..|.+.|..|. .|++|+++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3468999999999999999887 589999999864
No 447
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.19 E-value=0.79 Score=34.82 Aligned_cols=76 Identities=16% Similarity=0.290 Sum_probs=50.1
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcccccccCchhHHHHHHHHHcCCcEEEecceeeecccCCCeEEcC
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETS 218 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~l~~~~~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~v~~~ 218 (368)
.++++|+|.|..|..+|..|.+ .+.+|+++++++. . .+.+++.|+.++.+..-. ...+...
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~--------~----~~~~~~~g~~~i~gd~~~-----~~~l~~a 67 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRT--------R----VDELRERGVRAVLGNAAN-----EEIMQLA 67 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHH--------H----HHHHHHTTCEEEESCTTS-----HHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHH--------H----HHHHHHcCCCEEECCCCC-----HHHHHhc
Confidence 4689999999999999999985 4789999997653 1 233445788776543110 0011101
Q ss_pred CCcEEecCEEEEccCCC
Q 017664 219 SGETIDTDCHFMCTGKA 235 (368)
Q Consensus 219 ~g~~i~~d~vi~a~G~~ 235 (368)
+ .-.+|.+|++++..
T Consensus 68 -~-i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 68 -H-LECAKWLILTIPNG 82 (140)
T ss_dssp -T-GGGCSEEEECCSCH
T ss_pred -C-cccCCEEEEECCCh
Confidence 1 12589999998755
No 448
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.19 E-value=0.23 Score=43.40 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=29.2
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.++.+|.|||+|..|...|..|. .|++|+++++++
T Consensus 2 ~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp --CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34568999999999999999887 589999999864
No 449
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.17 E-value=0.26 Score=44.61 Aligned_cols=34 Identities=29% Similarity=0.370 Sum_probs=30.0
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...+|+|+|+|..|..+|..|+ .|.+|+++|+++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3478999999999999999887 599999999874
No 450
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.16 E-value=0.34 Score=37.67 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=31.6
Q ss_pred HHHhcCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 017664 134 EKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK 175 (368)
Q Consensus 134 ~~~~~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~ 175 (368)
.......+++|+|+|..|..++..|.+ .+.+|+++++++.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~ 53 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEY 53 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGG
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHH
Confidence 334457899999999999999999985 4679999988754
No 451
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=90.08 E-value=0.31 Score=44.69 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=30.6
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
.+|+|||+|.+|+-+|..|++ .+.+|+++++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK--AGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH--TTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh--CCCceEEEeCCCCC
Confidence 369999999999999999996 47999999987654
No 452
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.06 E-value=0.22 Score=48.80 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHhh-c------CCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-S------FADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~------g~~v~lie~~~ 48 (368)
.+||||||||+|||+||..|+ . |.+|+||||..
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 589999999999999999997 3 89999999975
No 453
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.04 E-value=0.3 Score=43.16 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=28.1
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
+.+|.|||+|..|.+.|..|. ++. ++.++|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 468999999999999999887 455 899999864
No 454
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.00 E-value=0.29 Score=42.25 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=29.3
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+++|+|.|||+-|...+..|. +|++|+++.+++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 357999999999999999986 699999999875
No 455
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.91 E-value=0.28 Score=43.18 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHhhc---CCcEEEEcCCCc
Q 017664 18 KVVVIGGGVGGSLLAYHIQS---FADVVLIDEKEY 49 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~~---g~~v~lie~~~~ 49 (368)
+|.|||+|..|.+.|..|.. +.+|+++|+++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 69999999999999998863 789999999763
No 456
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.88 E-value=0.28 Score=44.51 Aligned_cols=34 Identities=35% Similarity=0.337 Sum_probs=30.1
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...+|+|||+|..|..+|..++ .|.+|+++|+++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4578999999999999999887 599999999874
No 457
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.75 E-value=0.37 Score=42.67 Aligned_cols=35 Identities=34% Similarity=0.399 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~~ 49 (368)
+..+|.|||+|..|.+.|..|. ++. ++.++|.++.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3568999999999999999886 466 9999998763
No 458
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.71 E-value=0.09 Score=50.38 Aligned_cols=48 Identities=15% Similarity=0.300 Sum_probs=36.1
Q ss_pred CceeeeccCCcCCCCCCcEEEECCChHHHHHHHHhhc-CC-cEEEEcCCC
Q 017664 1 MCVWLWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQS-FA-DVVLIDEKE 48 (368)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~vvIIGaG~aGl~aA~~L~~-g~-~v~lie~~~ 48 (368)
|.|++|.......-+..+|+|||+|-.|..+|..|.+ |. +++|+|...
T Consensus 311 m~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 311 MKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4455665444333456799999999999999999985 64 899999764
No 459
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.69 E-value=0.34 Score=41.60 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.++++|||+|-+|-+++..|. .|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 578999999999999999987 489999999875
No 460
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.64 E-value=0.29 Score=44.87 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHhhcCCcEEEEcCCC
Q 017664 18 KVVVIGGGVGGSLLAYHIQSFADVVLIDEKE 48 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~ 48 (368)
+|.|||+|..|+..|..|.+|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 6999999999999999887799999999875
No 461
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=89.60 E-value=0.33 Score=43.15 Aligned_cols=35 Identities=26% Similarity=0.237 Sum_probs=29.2
Q ss_pred eEEEEcCchhHHHHHHHHhh-hCCCCeEEEEecCcc
Q 017664 141 SVLIVGGGPTGVELAGEIAV-DFPDKKVILVHRGPK 175 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~-~~~~~~v~~i~~~~~ 175 (368)
+|+|||+|.+|+-+|..|.+ ...+.+|+++++++.
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 69999999999999999984 115789999998753
No 462
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.59 E-value=0.57 Score=35.80 Aligned_cols=35 Identities=31% Similarity=0.462 Sum_probs=29.0
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.+++++|+|+|..|..++..|.. .+.+|+++.|.+
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~--~g~~v~v~~r~~ 54 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSY--PQYKVTVAGRNI 54 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCT--TTCEEEEEESCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEcCCH
Confidence 38999999999999999988874 466788888764
No 463
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.56 E-value=0.46 Score=41.73 Aligned_cols=35 Identities=23% Similarity=0.224 Sum_probs=30.7
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+..+|.|||.|.-|...|..|. .|++|+++++++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34568999999999999999987 599999999875
No 464
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.50 E-value=0.32 Score=42.61 Aligned_cols=33 Identities=18% Similarity=-0.045 Sum_probs=29.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+++|.|||.|.-|...|..|. .|++|+++|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 468999999999999999987 599999999875
No 465
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.43 E-value=0.51 Score=41.23 Aligned_cols=33 Identities=27% Similarity=0.445 Sum_probs=29.3
Q ss_pred CCcEEEEC-CChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIG-GGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIG-aG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
..+|.||| +|.-|.+.|..|+ .|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 35799999 9999999999997 499999999875
No 466
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.37 E-value=0.34 Score=42.56 Aligned_cols=31 Identities=39% Similarity=0.569 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 18 KVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
+|.|||+|..|.+.|..|. +|+ +|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7999999999999999887 577 999999875
No 467
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=89.37 E-value=0.34 Score=44.66 Aligned_cols=35 Identities=23% Similarity=0.456 Sum_probs=30.3
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK 175 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~ 175 (368)
..+|+|||+|++|+.+|..+++ .+.+|+++++.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~--~G~~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK--RGRRVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCcEEEEeCCCC
Confidence 4589999999999999999986 4889999998764
No 468
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.27 E-value=0.38 Score=42.51 Aligned_cols=36 Identities=28% Similarity=0.494 Sum_probs=29.7
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
|.++.+|.|||+|..|.+.|..|. .+. ++.|+|.++
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 455679999999999999999886 344 899999753
No 469
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.23 E-value=0.37 Score=41.53 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.++++|+|+|-.|.++|..|. .|.+|++++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3568999999999999999887 589999999874
No 470
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.20 E-value=0.31 Score=42.28 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
++|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 47999999999999999987 5999999998753
No 471
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.20 E-value=0.34 Score=42.84 Aligned_cols=35 Identities=14% Similarity=0.161 Sum_probs=30.6
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+.++|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4568999999999999999987 5999999998753
No 472
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=89.19 E-value=0.38 Score=42.95 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=29.3
Q ss_pred eEEEEcCchhHHHHHHHHhhhC----CCCeEEEEecCc
Q 017664 141 SVLIVGGGPTGVELAGEIAVDF----PDKKVILVHRGP 174 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~----~~~~v~~i~~~~ 174 (368)
+|+|||+|.+|+-+|..|+++. ++.+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999753 348999999874
No 473
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=89.18 E-value=0.34 Score=43.55 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=30.6
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
.++|+|||+|.+|+-+|..|+ + +.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCCc
Confidence 578999999999999999998 3 8899999987543
No 474
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.15 E-value=0.34 Score=43.14 Aligned_cols=34 Identities=21% Similarity=0.413 Sum_probs=29.7
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
.+++|.|||+|.-|.+.|..|. .|++|+++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4578999999999999999986 599999999874
No 475
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.12 E-value=0.35 Score=45.16 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=31.6
Q ss_pred CCCcEEEECCChHHHHHHHHhhcCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~g~~v~lie~~~~ 49 (368)
...+++|+|||-.|..+|..|.++++|.++|++..
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~ 268 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQ 268 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHH
T ss_pred cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHH
Confidence 35689999999999999999998899999999863
No 476
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.10 E-value=0.41 Score=42.43 Aligned_cols=33 Identities=33% Similarity=0.497 Sum_probs=28.5
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
..+|.|||+|..|.+.|..|. .+. +++++|.++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 568999999999999999887 465 899999864
No 477
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.06 E-value=0.37 Score=44.31 Aligned_cols=34 Identities=35% Similarity=0.707 Sum_probs=29.7
Q ss_pred eEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 141 SVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 141 ~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
+|+|||+|.+|+-+|..|.+ .+.+|+++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~--~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTN--AGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHH--TTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHH--cCCeEEEEecCCCc
Confidence 68999999999999999996 38899999986543
No 478
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.05 E-value=0.49 Score=44.26 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=30.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
...+|.|||+|.-|...|..|. .|++|+++|+++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3567999999999999999887 5999999998763
No 479
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=89.00 E-value=0.41 Score=43.96 Aligned_cols=36 Identities=17% Similarity=0.405 Sum_probs=31.2
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCC-CeEEEEecCccc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPD-KKVILVHRGPKL 176 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~-~~v~~i~~~~~~ 176 (368)
..+|+|||+|.+|+-+|..|.++ + .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~--g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQA--GFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEECCCCC
Confidence 56899999999999999999863 6 799999987654
No 480
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.99 E-value=0.41 Score=42.33 Aligned_cols=34 Identities=35% Similarity=0.555 Sum_probs=28.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SF--ADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g--~~v~lie~~~ 48 (368)
++.+|+|||+|..|.+.|..|. ++ .++.++|.++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4568999999999999999886 45 4899999764
No 481
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.96 E-value=0.53 Score=42.67 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=31.0
Q ss_pred CCCcEEEECCChHHHHHHHHhhc-CCcEEEEcCCCc
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQS-FADVVLIDEKEY 49 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~~-g~~v~lie~~~~ 49 (368)
..++|.|||+|.-|...+..+++ |++|.++|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 45789999999999999999985 999999998764
No 482
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=88.91 E-value=0.47 Score=44.29 Aligned_cols=35 Identities=37% Similarity=0.603 Sum_probs=30.2
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.+|+|||+|.+|+-+|..|.++.++.+|+++++++
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~ 39 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGE 39 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 58999999999999999999764448999999864
No 483
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=88.80 E-value=0.42 Score=42.63 Aligned_cols=33 Identities=18% Similarity=0.453 Sum_probs=29.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
.+|+|||+|.+|+-+|..|++ .+.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~--~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA--GGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCC
Confidence 479999999999999999996 488999999875
No 484
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=88.78 E-value=0.43 Score=43.37 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=29.7
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCcc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPK 175 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~ 175 (368)
..|+|||+|.+|+-+|..|++ .+.+|+++++.+.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~--~G~~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE--RGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCCC
Confidence 379999999999999999996 4889999998753
No 485
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.77 E-value=0.4 Score=42.02 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=28.0
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCC--cEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFA--DVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~--~v~lie~~~ 48 (368)
+.+|.|||||..|...|..|. ++. ++.|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 468999999999999998776 577 999999876
No 486
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=88.74 E-value=0.37 Score=41.78 Aligned_cols=33 Identities=24% Similarity=0.284 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
++|.|||.|.-|...|..|. .|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 47999999999999999987 5999999998753
No 487
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=88.69 E-value=0.6 Score=45.42 Aligned_cols=45 Identities=33% Similarity=0.518 Sum_probs=39.4
Q ss_pred CCCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCceeeeccc
Q 017664 12 GLVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITWAS 56 (368)
Q Consensus 12 ~~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~~~~~~~~ 56 (368)
.|++++|++|||+|..|...|..|. .|.+|++||+++++|+.|..
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 3556899999999999999999987 59999999999999977643
No 488
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=88.68 E-value=0.45 Score=41.63 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=29.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
..++++|||+|.+|.++|..|. .|. +|+|++|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4568999999999999999987 487 999999874
No 489
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.65 E-value=0.4 Score=44.50 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
..++.|||.|.-|+..|..|. .|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 468999999999999999987 5999999999874
No 490
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.56 E-value=0.35 Score=42.27 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=29.6
Q ss_pred CCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 16 ~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+++|.|||+|..|...|..|. .|++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 468999999999999999987 599999999875
No 491
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=88.49 E-value=0.54 Score=42.58 Aligned_cols=62 Identities=15% Similarity=0.196 Sum_probs=45.5
Q ss_pred cCCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecC-cccccc--------------------------cCchhHHHHHH
Q 017664 138 SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRG-PKLLEF--------------------------VGSRASQIALD 190 (368)
Q Consensus 138 ~~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~-~~~l~~--------------------------~~~~~~~~~~~ 190 (368)
...+|+|||+|.+|+-+|..|.+ .+.+|++++++ +++... .-+.....+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~--~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~ 120 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR--AGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLA 120 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--TSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHH--CCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHH
Confidence 35789999999999999999986 37899999988 543210 00223456778
Q ss_pred HHHcCCcEEEe
Q 017664 191 WLTSKKVEVIL 201 (368)
Q Consensus 191 ~l~~~gv~i~~ 201 (368)
.+++.|++.+.
T Consensus 121 ~~~~lGl~~~~ 131 (376)
T 2e1m_A 121 LIDKLGLKRRL 131 (376)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCCcce
Confidence 88899987654
No 492
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.47 E-value=0.39 Score=44.05 Aligned_cols=36 Identities=22% Similarity=0.147 Sum_probs=31.5
Q ss_pred CCCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 13 LVEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 13 ~~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
+.....++|||.|+.|..+|..|+ .|.+|++.|+++
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345679999999999999999998 599999999865
No 493
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.41 E-value=0.38 Score=44.89 Aligned_cols=35 Identities=26% Similarity=0.219 Sum_probs=30.9
Q ss_pred CCCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 14 VEKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 14 ~~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...+.++|+|+|..|.++|..|+ .|.+|+++|+++
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35678999999999999999998 599999999864
No 494
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.37 E-value=0.45 Score=42.89 Aligned_cols=34 Identities=26% Similarity=0.454 Sum_probs=29.9
Q ss_pred CCeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCc
Q 017664 139 ANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGP 174 (368)
Q Consensus 139 ~~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~ 174 (368)
..+|+|||+|.+|+-+|..|++ .+.+|+++++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~--~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAK--ENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHh--CCCcEEEEeCCC
Confidence 3579999999999999999996 488999999864
No 495
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.36 E-value=0.47 Score=41.73 Aligned_cols=32 Identities=41% Similarity=0.534 Sum_probs=27.8
Q ss_pred CcEEEECCChHHHHHHHHhh-cCC-cEEEEcCCC
Q 017664 17 KKVVVIGGGVGGSLLAYHIQ-SFA-DVVLIDEKE 48 (368)
Q Consensus 17 ~~vvIIGaG~aGl~aA~~L~-~g~-~v~lie~~~ 48 (368)
.+|.|||+|..|...|..|. .|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 58999999999999999886 465 899999765
No 496
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.35 E-value=0.52 Score=41.58 Aligned_cols=34 Identities=35% Similarity=0.568 Sum_probs=28.5
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cC--CcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SF--ADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g--~~v~lie~~~ 48 (368)
+..+|.|||+|..|.+.|..|. ++ .++.++|.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4568999999999999999886 34 3899999874
No 497
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.34 E-value=0.47 Score=42.96 Aligned_cols=35 Identities=34% Similarity=0.598 Sum_probs=30.5
Q ss_pred CeEEEEcCchhHHHHHHHHhhhCCCCeEEEEecCccc
Q 017664 140 NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKL 176 (368)
Q Consensus 140 ~~v~VvG~g~~~~e~a~~l~~~~~~~~v~~i~~~~~~ 176 (368)
.+|+|||+|++|+-+|..|++ .+.+|+++++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~--~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK--YGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--TTCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH--CCCCEEEEeCCCCC
Confidence 369999999999999999986 48899999988643
No 498
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=88.21 E-value=0.35 Score=44.83 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHhh-cCCcEEEEcCCCc
Q 017664 18 KVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEY 49 (368)
Q Consensus 18 ~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~~ 49 (368)
+|.|||+|..|+..|..|. .|++|+++|+++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 6999999999999999887 5999999998753
No 499
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.20 E-value=0.34 Score=45.31 Aligned_cols=52 Identities=13% Similarity=0.092 Sum_probs=40.8
Q ss_pred hhHHHHHHHHHcC--------CcEEEecceeeecccCCC--eEEcCCCcEEecCEEEEccCC
Q 017664 183 RASQIALDWLTSK--------KVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGK 234 (368)
Q Consensus 183 ~~~~~~~~~l~~~--------gv~i~~~~~v~~i~~~~~--~v~~~~g~~i~~d~vi~a~G~ 234 (368)
.+.+.+.+.+.+. |.+++++++|++|+.+++ .|.+.+|+++++|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCH
Confidence 4455555555443 678999999999987665 678889989999999999874
No 500
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.20 E-value=0.45 Score=41.63 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=30.2
Q ss_pred CCCcEEEECCChHHHHHHHHhh-cCCcEEEEcCCC
Q 017664 15 EKKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKE 48 (368)
Q Consensus 15 ~~~~vvIIGaG~aGl~aA~~L~-~g~~v~lie~~~ 48 (368)
...++.|||+|..|..+|..|+ .|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4578999999999999999987 499999999864
Done!