BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017668
         (368 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8BWP8|B3GN1_MOUSE N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase
           OS=Mus musculus GN=B3gnt1 PE=2 SV=1
          Length = 415

 Score = 38.1 bits (87), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 19/102 (18%)

Query: 171 YRTTYLVDLVREPA--GTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQPFDYIREG 228
           Y    L +L RE A    V+ +D +     WRG+  ++  + H W  T    P   IR  
Sbjct: 207 YPNNLLRNLAREEANYALVIDVDMVPSEGLWRGLREMLDQSNH-WDGTALVVPAFEIRRS 265

Query: 229 RKLYKDMNRLVA---------FYKGL-------TTWARWVNF 254
           R++  + N LV          FY GL       T ++RWVN 
Sbjct: 266 RRMPMNKNELVQLYQVGEVRPFYYGLCTPCHAPTNYSRWVNL 307


>sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
          Length = 555

 Score = 32.0 bits (71), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 324 ITRLSQYRKDAHPSEYGGHSDDCSHWCLPGLPDTWNQLM 362
           + ++SQ+ +D  P    GH +DC HW     P   NQ++
Sbjct: 500 VPQMSQHMEDWIPHLKRGHIEDCGHWTQMDKPTEVNQIL 538


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.139    0.459 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,230,807
Number of Sequences: 539616
Number of extensions: 6631001
Number of successful extensions: 11847
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11846
Number of HSP's gapped (non-prelim): 3
length of query: 368
length of database: 191,569,459
effective HSP length: 119
effective length of query: 249
effective length of database: 127,355,155
effective search space: 31711433595
effective search space used: 31711433595
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)