BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017670
(368 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449437312|ref|XP_004136436.1| PREDICTED: uncharacterized protein LOC101208860 [Cucumis sativus]
Length = 600
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/374 (49%), Positives = 244/374 (65%), Gaps = 23/374 (6%)
Query: 2 KSSLGEKVSSIG---GAQQGEIVRTIKPGITFGDKIASSSKVGFEKSKAKSSKALETKEE 58
KSS EK S+ G G+ IK GDK+ K+ S K A + +
Sbjct: 243 KSSNEEKSSAHAIERGIGMGKTSSIIKHENILGDKVPPKLKI---DSNEKPGNAKDVEGR 299
Query: 59 VKSFKDPNELYNGPSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPTLAT----IAD 114
VKS ++ E+ + P+ K K DSS ++ K +N ++KLG+D H TLA+ +
Sbjct: 300 VKSLRESAEVEHRPAKKTKLDSSVQLSPGKTENDIEKLGVD---HNNGDTLASSPKALVS 356
Query: 115 EDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVE 174
ED S+ K KD H KKPKLDE+ K ++GK ++ASSL + ++VE
Sbjct: 357 EDASRAKNV--KDSHETKGSFLKKPKLDEKPTKVSNGKNLKASSL--------IHGEVVE 406
Query: 175 VTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSA 234
VTRRP DRS+WFK LPWEERI+ AHE GTLV+++NLDPSYTS VED+VWHAF E+C+A
Sbjct: 407 VTRRPDADRSRWFKGLPWEERIKDAHEQGTLVLIQNLDPSYTSGEVEDIVWHAFNESCTA 466
Query: 235 KMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQS 294
KMI + A + P+ GQ++V+FKT+E AE VV KL EGCLLL+NG L+GS TP + K+
Sbjct: 467 KMIQKTANSMPHIGQAYVVFKTKEAAEKVVRKLHEGCLLLANGSVLVGSFETPHLSSKKQ 526
Query: 295 KFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQ 354
F GH +DKL+ QMQREM+ AVSTSHCSQPN++EYDMA+EW LLQER + K+L++QQ
Sbjct: 527 TFFGHHCIDKLRHQMQREMKGAVSTSHCSQPNTIEYDMAMEWCLLQERSELVGKQLFKQQ 586
Query: 355 ELELKKLKVKLKSK 368
E EL+KLK KLKS+
Sbjct: 587 EEELRKLKSKLKSR 600
>gi|449509146|ref|XP_004163508.1| PREDICTED: uncharacterized protein LOC101231100 [Cucumis sativus]
Length = 600
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/374 (49%), Positives = 243/374 (64%), Gaps = 23/374 (6%)
Query: 2 KSSLGEKVSSIG---GAQQGEIVRTIKPGITFGDKIASSSKVGFEKSKAKSSKALETKEE 58
KSS EK S+ G G+ IK GDK+ K+ S K A + +
Sbjct: 243 KSSNEEKSSAHAIERGIGMGKTSSIIKHENILGDKVPPKLKI---DSNEKPGNAKDVEGR 299
Query: 59 VKSFKDPNELYNGPSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPTLAT----IAD 114
KS ++ E+ + P+ K K DSS ++ K +N ++KLG+D H TLA+ +
Sbjct: 300 AKSLRESAEVEHRPAKKTKLDSSVQLSPGKTENDIEKLGVD---HNNGDTLASSPKALVS 356
Query: 115 EDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVE 174
ED S+ K KD H KKPKLDE+ K ++GK ++ASSL + ++VE
Sbjct: 357 EDASRAKNV--KDSHETKGSFLKKPKLDEKPTKVSNGKNLKASSL--------IHGEVVE 406
Query: 175 VTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSA 234
VTRRP DRS+WFK LPWEERI+ AHE GTLV+++NLDPSYTS VED+VWHAF E+C+A
Sbjct: 407 VTRRPDADRSRWFKGLPWEERIKDAHEQGTLVLIQNLDPSYTSGEVEDIVWHAFNESCTA 466
Query: 235 KMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQS 294
KMI + A + P+ GQ++V+FKT+E AE VV KL EGCLLL+NG L+GS TP + K+
Sbjct: 467 KMIQKTANSMPHIGQAYVVFKTKEAAEKVVRKLHEGCLLLANGSVLVGSFETPHLSSKKQ 526
Query: 295 KFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQ 354
F GH +DKL+ QMQREM+ AVSTSHCSQPN++EYDMA+EW LLQER + K+L++QQ
Sbjct: 527 TFFGHHCIDKLRHQMQREMKGAVSTSHCSQPNTIEYDMAMEWCLLQERSELVGKQLFKQQ 586
Query: 355 ELELKKLKVKLKSK 368
E EL+KLK KLKS+
Sbjct: 587 EEELRKLKSKLKSR 600
>gi|224141801|ref|XP_002324251.1| predicted protein [Populus trichocarpa]
gi|222865685|gb|EEF02816.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/339 (51%), Positives = 226/339 (66%), Gaps = 13/339 (3%)
Query: 30 FGDKIASSSKVGFEKSKAKSSKALETKEEVKSFKDPNELYNGPSNKAKFDSSRKVFDDKI 89
G+K ASSS V F++ + + + +EE+K K +L + KAK D S K D
Sbjct: 217 LGEKAASSSGVQFDEVAKTNERQVLVEEELKVAKASGDLDDRSCKKAKLDDSAKASHDNK 276
Query: 90 KNRVQKLGLDSNVHGPKPTLATIADEDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPT 149
QKL DSN K +A I + K++ + KDP + +KPK DE+L
Sbjct: 277 VKSTQKLRHDSNDSSSK-AVAQITPAAEDKSRPNLTKDPQETNNALSEKPKPDEKL---A 332
Query: 150 SGKLVEASSLQPSIVENKSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLE 209
+GK EAS QPS +K++ +I E TRRP+ PWEE ++ AHE GTLV+L+
Sbjct: 333 NGKFPEASLRQPSEEGSKTSYKIQEPTRRPAT---------PWEETMQTAHEQGTLVLLQ 383
Query: 210 NLDPSYTSTVVEDLVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEE 269
NLDPSYTS VEDL+W AFK++C+AKMI R A +SP+ GQ+FVIF+ REVAE+ V KL+E
Sbjct: 384 NLDPSYTSAEVEDLIWQAFKQSCTAKMIQRTARSSPHSGQAFVIFQKREVAEMAVAKLDE 443
Query: 270 GCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLE 329
CL+LSNGRPL+GSI PCF GKQS F GHL ++KL+ MQREM+EAVSTSHCSQPN+LE
Sbjct: 444 VCLMLSNGRPLVGSIAAPCFPGKQSTFFGHLTINKLRIHMQREMKEAVSTSHCSQPNTLE 503
Query: 330 YDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
YDMA+EW LLQ+R D A +KL +QQE EL+KL+ LKSK
Sbjct: 504 YDMAMEWCLLQDRSDLALRKLRQQQEQELRKLRATLKSK 542
>gi|296081917|emb|CBI20922.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/436 (43%), Positives = 254/436 (58%), Gaps = 71/436 (16%)
Query: 1 MKSSLGEKVSSIGG--AQQGEIVRTIKPGITF------GDKIASSSKVGFEKSKAKSSKA 52
+K SL E SS+GG A ++V I+ GD S +V K K K
Sbjct: 196 VKVSLVEHKSSLGGKHASDADMVLDNMTNISVERENIVGD--GSKLQVDSVKYDDKVGKV 253
Query: 53 L----ETKEEVKSFKDPNELYNGPSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPT 108
L E +E+VKS +D L + PS +AK SS ++ +D+ +QK +DS+V K +
Sbjct: 254 LVNQVEVEEKVKSTRDSGLLDSRPSKRAKVSSSTELSEDRNNRSLQKSNIDSHVKEMKAS 313
Query: 109 LATIADEDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKS 168
++T+ V KD ++K KK K E++ K ++G L++A + + V+ K
Sbjct: 314 VSTVTTTKDKTKLDLV-KDSPSLEKEASKKLKSYEKMTKLSNGNLIKAFARRSPSVDTKI 372
Query: 169 NKQIVEVTRRP-------------SLDRSKW----------------------------- 186
QI+EVTRRP SL+ +W
Sbjct: 373 EGQIMEVTRRPNAVSCIQSSSGPTSLEDPRWVKAMEAFVAPGPTRLDDCRDPPQSLEGNK 432
Query: 187 --------------FKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENC 232
F+ LPWEER++ AH+ GTLV+L+NLDP+YTS VED+VWH FKE+C
Sbjct: 433 AHIGVALPSDRSRWFRGLPWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESC 492
Query: 233 SAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGK 292
+A+MI A +SP+ GQ+FVIFKTR+ A + KLEEGCLLLSNGRPL+GS GTPCF GK
Sbjct: 493 TARMIQHTAISSPHSGQAFVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGK 552
Query: 293 QSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYE 352
QS FVGHL++DK+K QMQREM++AVSTSHCSQPN++EY+MA++W L QER D WKKLY+
Sbjct: 553 QSTFVGHLSIDKVKVQMQREMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLYK 612
Query: 353 QQELELKKLKVKLKSK 368
+Q EL+KLK LKSK
Sbjct: 613 RQGDELRKLKASLKSK 628
>gi|255551070|ref|XP_002516583.1| hypothetical protein RCOM_0803370 [Ricinus communis]
gi|223544403|gb|EEF45924.1| hypothetical protein RCOM_0803370 [Ricinus communis]
Length = 730
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/246 (56%), Positives = 180/246 (73%)
Query: 120 TKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVEVTRRP 179
+KR + KDP+ + KK KLDE+L K +GKL S + S + ++ +I+EVTRRP
Sbjct: 480 SKRKLVKDPNETEILSFKKRKLDEKLTKFANGKLPRESPREVSNDVSNTDSKILEVTRRP 539
Query: 180 SLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPR 239
D+ KWFK LPWEERI+ AH G +V+L+NLDPS+T VED+VWHA K++C+AKMIP
Sbjct: 540 EADKIKWFKGLPWEERIKAAHAEGRIVLLQNLDPSFTGLEVEDIVWHALKQSCTAKMIPC 599
Query: 240 VAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGH 299
AF+SP+ GQ+F IFKTRE AE VTKL+EGCL+ S GRPL+GSI F GK S + GH
Sbjct: 600 TAFSSPHSGQAFAIFKTREAAETAVTKLDEGCLMTSYGRPLVGSIAKLSFPGKPSTYFGH 659
Query: 300 LALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELK 359
+++DK + QMQR MREAVSTSHCSQPN++EYDMA+EW LQE+ + W+ LY+Q EL+
Sbjct: 660 MSIDKTRHQMQRVMREAVSTSHCSQPNTIEYDMALEWCFLQEQTNQEWELLYKQHGKELR 719
Query: 360 KLKVKL 365
KL+ L
Sbjct: 720 KLESTL 725
>gi|357466625|ref|XP_003603597.1| hypothetical protein MTR_3g109470 [Medicago truncatula]
gi|355492645|gb|AES73848.1| hypothetical protein MTR_3g109470 [Medicago truncatula]
Length = 672
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/321 (44%), Positives = 206/321 (64%), Gaps = 12/321 (3%)
Query: 36 SSSKVGFEKSKAKSSKALETKEEVKSFKDPNELYNGPSNKAKFDS-SRKVFDDKIKNRVQ 94
+S K + S AK++ ++ + +V D E+ PS K K D+ S K+ DK+ +
Sbjct: 347 TSEKDKYNFSSAKTTNNVKNRRDV----DVKEV---PSKKLKIDTTSVKLSSDKLADMQI 399
Query: 95 KLGLDSNVHGPKPTLATIADEDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLV 154
L+ K + + + +R D + + P KK K+D K +SGKL
Sbjct: 400 NKRLEERKASFKEKYGVSSRTNHVQNQRNHDDD---VKEAPSKKLKIDTMHTKLSSGKLR 456
Query: 155 EASSLQPSIVENKSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPS 214
+ SS +E+K + + +VT+RP +DRSKWFK +PWEER++ A+E G LV+LENLDPS
Sbjct: 457 KESSTTSPNLEHKQDYSVTDVTQRPDVDRSKWFKPMPWEERMKDAYEQGRLVLLENLDPS 516
Query: 215 YTSTVVEDLVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLL 274
TS+ V+D++ FKE C+AK+I + A++SP GQ+F IFK +E AE V+ LEEGC L+
Sbjct: 517 LTSSEVQDIILDGFKERCTAKLIQKTAYSSPNSGQAFAIFKRKEAAESVIRNLEEGCFLM 576
Query: 275 SNGRPLLGSIGT-PCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMA 333
SNGRPL+GS G PC K+ F GH +D+L+ Q QREM++A+STSHCSQPN++EYDMA
Sbjct: 577 SNGRPLVGSFGRLPCIPEKKPTFYGHHVIDQLRLQTQREMKDAISTSHCSQPNNIEYDMA 636
Query: 334 IEWSLLQERLDCAWKKLYEQQ 354
+EW LLQER D +W+KLY++Q
Sbjct: 637 VEWCLLQERADKSWRKLYQRQ 657
>gi|147772807|emb|CAN69406.1| hypothetical protein VITISV_042543 [Vitis vinifera]
Length = 417
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 137/161 (85%)
Query: 191 PWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPRVAFASPYFGQS 250
PWEER++ AH+ GTLV+L+NLDP+YTS VED+VWH FKE+C+A+MI R +SP+ GQ+
Sbjct: 206 PWEERMQTAHQQGTLVLLQNLDPAYTSAEVEDIVWHGFKESCTARMIQRTTISSPHSGQA 265
Query: 251 FVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLALDKLKFQMQ 310
FVIFKTR+ A + KLEEGCLLLSNGRPL+GS GTPCF GKQS FVGHL++DK+K QMQ
Sbjct: 266 FVIFKTRDAAVSAIRKLEEGCLLLSNGRPLVGSFGTPCFPGKQSTFVGHLSIDKVKVQMQ 325
Query: 311 REMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLY 351
REM++AVSTSHCSQPN++EY+MA++W L QER D WKKLY
Sbjct: 326 REMKQAVSTSHCSQPNTIEYEMAMDWCLQQERSDSCWKKLY 366
>gi|294464714|gb|ADE77864.1| unknown [Picea sitchensis]
Length = 328
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 176/258 (68%), Gaps = 14/258 (5%)
Query: 115 EDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVE-NKSNK--- 170
ED +K K K+ G +K KK K+D+ +K + G S P + + NK K
Sbjct: 61 EDVAKRKIDSKKEVLGTEKKLVKKAKVDDTAVKASEG----LSQTTPQLTDLNKQKKLGG 116
Query: 171 -QIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFK 229
+I+E+ ++P ++ ++WFK LPW+ER+R +E ++ L+N DPSYTS+ +ED++WH F
Sbjct: 117 REIIEIAKKPEVESNRWFKGLPWDERLRKGYEQKAVIRLQNFDPSYTSSEIEDIMWHIFG 176
Query: 230 ENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCF 289
E C+AK+IPR AF++ G++FVIF+T+E A++VV KL+E L+LS+GRPL+ + T
Sbjct: 177 ERCTAKVIPRTAFSNLKCGEAFVIFRTKEGADIVVKKLDEAFLMLSDGRPLIATKATAPV 236
Query: 290 TGKQSKFVGHLALDKLKFQMQR-----EMREAVSTSHCSQPNSLEYDMAIEWSLLQERLD 344
+ KF GH+ ++K + Q+ R ++R+AVSTSHCSQPN++EY+MA++W LLQE+ +
Sbjct: 237 ASGKPKFAGHICIEKHRLQLHRSHQMEDIRKAVSTSHCSQPNTIEYEMAMDWRLLQEKSE 296
Query: 345 CAWKKLYEQQELELKKLK 362
C WK+LY+Q+ LEL K+K
Sbjct: 297 CWWKELYKQENLELVKVK 314
>gi|297811263|ref|XP_002873515.1| hypothetical protein ARALYDRAFT_487983 [Arabidopsis lyrata subsp.
lyrata]
gi|297319352|gb|EFH49774.1| hypothetical protein ARALYDRAFT_487983 [Arabidopsis lyrata subsp.
lyrata]
Length = 695
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/160 (57%), Positives = 119/160 (74%), Gaps = 2/160 (1%)
Query: 183 RSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPRVAF 242
+SKWF+ LPWEE +R A + GT+V+L+NLDP+YTS VED+V+ A E C A+MI R +
Sbjct: 505 KSKWFRSLPWEESMREAEKKGTVVLLQNLDPTYTSDEVEDIVYSALNEQCEARMIERTSV 564
Query: 243 ASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL 302
P+ G++ VIFKTREVAE V+ +L+EGCLLLS+GRPL+ S GK S F GH+ L
Sbjct: 565 TIPHVGEALVIFKTREVAERVIRRLDEGCLLLSSGRPLVASFAKITPPGKPSSFSGHIKL 624
Query: 303 DKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQER 342
K Q +REMR+AV+TSHCSQPN+LE+DMA+EW L Q R
Sbjct: 625 HKT--QTRREMRDAVATSHCSQPNNLEFDMAMEWCLHQAR 662
>gi|357451135|ref|XP_003595844.1| hypothetical protein MTR_2g062470 [Medicago truncatula]
gi|355484892|gb|AES66095.1| hypothetical protein MTR_2g062470 [Medicago truncatula]
Length = 582
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 137/227 (60%), Gaps = 26/227 (11%)
Query: 167 KSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWH 226
K +++ EVT RP+ ++ KWFK++PWEER++ A E GTLV+L NLDPSYTS VEDLVWH
Sbjct: 348 KPTRKVTEVTERPNAEKRKWFKKMPWEERLQTAQELGTLVLLSNLDPSYTSFEVEDLVWH 407
Query: 227 AFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRP------- 279
A KE A+MI ++ Y+G++ IF++++ +++L CL+L +GR
Sbjct: 408 ALKEKVEARMIELSPTSNTYYGRALAIFRSKDAGANAISELNRRCLILEDGRKDRVLARR 467
Query: 280 -------------------LLGSIGTPCFTGKQSKFVGHLALDKLKFQMQREMREAVSTS 320
+ +GT KQS F+GHL++ + QREMR AVSTS
Sbjct: 468 ILRFYVPRHLHRASTSFQVVTARMGTVSDPVKQSTFIGHLSISRAVLHKQREMRNAVSTS 527
Query: 321 HCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKS 367
HCSQPN++EY MAIEW+ ++ + WK L E+Q E+ +K KL++
Sbjct: 528 HCSQPNNIEYAMAIEWTHQYDKSEACWKALCEKQMKEIDDVKSKLRT 574
>gi|297743374|emb|CBI36241.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 177 RRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKM 236
R S+D ++ + PW++RI+ AHE GTLV+LENLD SYTS+ VEDLVWHAF +AKM
Sbjct: 326 RTGSMDDTRRL-DAPWDKRIQRAHEQGTLVLLENLDRSYTSSEVEDLVWHAFNVRATAKM 384
Query: 237 IPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKF 296
I F+SP+ G++FVIFK + A++V+++L CL+L++GRP++G P K + F
Sbjct: 385 IQCGTFSSPHNGKAFVIFKLKATADMVISQLNAKCLMLADGRPVVGHRKAPTDPSKPASF 444
Query: 297 VGHLALDKLKFQMQRE-MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYE 352
VGHL +DK++FQ Q E MR AVSTSH SQPN++E+D+A EW +LQE+ WK LYE
Sbjct: 445 VGHLFIDKIRFQRQPEYMRNAVSTSHYSQPNTIEFDLATEWRVLQEKSVLWWKALYE 501
>gi|334187617|ref|NP_196708.5| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
gi|332004300|gb|AED91683.1| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
Length = 757
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 150/268 (55%), Gaps = 52/268 (19%)
Query: 147 KPTSGKLVEASSLQPSIVENKSNKQIVEVTRRP------SLDRSKWFKEL---------- 190
KP+ G+ + S +N+ N Q+ EV RRP SLD WF +
Sbjct: 433 KPSFGRAEDKMSAD----DNERNYQVTEVCRRPDARVVKSLDARMWFCKNTILKGAVLFY 488
Query: 191 ------------------------------PWEERIRVAHEHGTLVVLENLDPSYTSTVV 220
PWEE +R A + GT+V+L+NLDP+YTS V
Sbjct: 489 SPSHCMLYSCSDVLSFFSSYYVTTMLGNIEPWEESMREAEKKGTVVLLQNLDPTYTSDEV 548
Query: 221 EDLVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPL 280
ED+V+ A + C A+MI R + P+ G++ VIFKTREVAE V+ +L+EGCLLLS+GRPL
Sbjct: 549 EDIVYSALNQQCEARMIERTSVTIPHIGEALVIFKTREVAERVIRRLDEGCLLLSSGRPL 608
Query: 281 LGSIGTPCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQ 340
+ S GK S F GH+ L K Q +REMR+AV+TSH SQPN+LE+DMA+EW L Q
Sbjct: 609 VASFAKITPPGKPSLFSGHIKLHKT--QTRREMRDAVATSHSSQPNNLEFDMAMEWCLHQ 666
Query: 341 ERLDCAWKKLYEQQELELKKLKVKLKSK 368
R + A + + ++Q E+K L++ K K
Sbjct: 667 ARHEQASESVSKRQLEEMKSLRINFKLK 694
>gi|255553035|ref|XP_002517560.1| conserved hypothetical protein [Ricinus communis]
gi|223543192|gb|EEF44724.1| conserved hypothetical protein [Ricinus communis]
Length = 508
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 168/285 (58%), Gaps = 13/285 (4%)
Query: 72 PSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPTLATIADED-KSKTKRAVAKDPHG 130
P KA ++ ++ I R + +D++ P D++ +S + + P+
Sbjct: 205 PVVKASLRLKERILNENITRR-PRTPIDNDRTAPNKVPCNQIDKNAESVSYSRDSSAPNT 263
Query: 131 IDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVEVTRRPSLDRSKWFKEL 190
P KK KL L + K+V ++ P I + K I +T +P + KWFK+
Sbjct: 264 NAAWPVKKRKL---LHDEMASKVV---TVDPCIASDGGLKTIPRITAKPHAEGGKWFKQ- 316
Query: 191 PWEERIRVAHEHGTLVVLENLDPSYTSTVVE----DLVWHAFKENCSAKMIPRVAFASPY 246
PW E++R + E GTLV+LENLDPS S+ VE DL+WHA K AKMI R F+S
Sbjct: 317 PWREKLRRSEEAGTLVLLENLDPSLASSDVELLPQDLIWHALKLRVEAKMIQRSTFSSLL 376
Query: 247 FGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLALDKLK 306
+G++FV+F ++E AE + KL+ CL+L++GRP++GS G+ K + F GH+ L K++
Sbjct: 377 YGKAFVVFGSKEAAESAIFKLQTRCLVLTDGRPIVGSRGSLKDPAKSADFTGHICLSKIR 436
Query: 307 FQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLY 351
+ +EMR+AVSTSH SQPN++EY+MAIEW LLQ++ D W +L+
Sbjct: 437 KKQTQEMRKAVSTSHLSQPNTIEYEMAIEWRLLQKQFDECWNELH 481
>gi|7573404|emb|CAB87707.1| putative protein [Arabidopsis thaliana]
Length = 691
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 135/242 (55%), Gaps = 52/242 (21%)
Query: 147 KPTSGKLVEASSLQPSIVENKSNKQIVEVTRRP------SLDRSKWFKEL---------- 190
KP+ G+ + S +N+ N Q+ EV RRP SLD WF +
Sbjct: 433 KPSFGRAEDKMSAD----DNERNYQVTEVCRRPDARVVKSLDARMWFCKNTILKGAVLFY 488
Query: 191 ------------------------------PWEERIRVAHEHGTLVVLENLDPSYTSTVV 220
PWEE +R A + GT+V+L+NLDP+YTS V
Sbjct: 489 SPSHCMLYSCSDVLSFFSSYYVTTMLGNIEPWEESMREAEKKGTVVLLQNLDPTYTSDEV 548
Query: 221 EDLVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPL 280
ED+V+ A + C A+MI R + P+ G++ VIFKTREVAE V+ +L+EGCLLLS+GRPL
Sbjct: 549 EDIVYSALNQQCEARMIERTSVTIPHIGEALVIFKTREVAERVIRRLDEGCLLLSSGRPL 608
Query: 281 LGSIGTPCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQ 340
+ S GK S F GH+ L K Q +REMR+AV+TSH SQPN+LE+DMA+EW L Q
Sbjct: 609 VASFAKITPPGKPSLFSGHIKLHKT--QTRREMRDAVATSHSSQPNNLEFDMAMEWCLHQ 666
Query: 341 ER 342
R
Sbjct: 667 AR 668
>gi|357116386|ref|XP_003559962.1| PREDICTED: uncharacterized protein LOC100841585 [Brachypodium
distachyon]
Length = 509
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 146/266 (54%), Gaps = 22/266 (8%)
Query: 109 LATIADEDKSKTKRAVAKDPHGI--DKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVEN 166
L +ED K + + K + +K P KK K ++L ++ +++ P +E
Sbjct: 255 LPPAVEEDAPKPTQNIPKRTQKVLPEKMPSKKLKFSQDLAVQNVAPIIPDATVCPGPLE- 313
Query: 167 KSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWH 226
TR+ DRSKWFK +PWEE++++ E G LV ++NLD + S+ V +L+
Sbjct: 314 -------LTTRQAVPDRSKWFKPIPWEEQLQMGDEEGRLVYIQNLDIQFGSSDVMELIRE 366
Query: 227 AFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIG- 285
A + C+AK I + P G+++ +FK++ A+ VTK+ G L+ NGRPL S G
Sbjct: 367 ALQLTCNAKTINHPTYDDPNNGKAYAVFKSKNAADTAVTKINSG--LIVNGRPLYCSKGL 424
Query: 286 ----TPCFTGKQSKFVGHLALDKLKF-QMQR-EMREAVSTSHCSQPNSLEYDMAIEWSLL 339
TP +G +GHL + K + QR E ++AVSTSHCSQPN++EYD+A++W L+
Sbjct: 425 LKVPTPPASG---ALMGHLTISNKKMGRAQRDEQKKAVSTSHCSQPNTIEYDLALDWMLV 481
Query: 340 QERLDCAWKKLYEQQELELKKLKVKL 365
+E+ + L+++ E K K+
Sbjct: 482 REKQARKFSILHKKHAEERKLFTAKM 507
>gi|222618838|gb|EEE54970.1| hypothetical protein OsJ_02569 [Oryza sativa Japonica Group]
Length = 538
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 105 PKPTLATIADEDKSKTKRAVAKDPHGIDKG--PCKKPKLDEELLKPTSGKLVEASSLQPS 162
P P +A + +E SK+ + K + G P K+ K E V ++
Sbjct: 249 PPPHVA-LKEESVSKSTENITKPAQKVLPGERPPKRVKFSEN---------VTVQNVPLD 298
Query: 163 IVENKSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVED 222
+ E S +E+ R + DRSKWFK +PW+ R+R A E GTLV ++NLD + + +E+
Sbjct: 299 VPERPSRTGPLELAGRQA-DRSKWFK-IPWDTRLRNADEQGTLVYIQNLDIQFAAADIEE 356
Query: 223 LVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLG 282
L+ A + NC AK I + P G+++ IFKT+ A+ ++K+ G L+ GRPL
Sbjct: 357 LIRDALQLNCIAKPINHPTYDDPNNGKAYAIFKTKSAADSAISKINSG--LVVGGRPLYC 414
Query: 283 SIGTPCFTGKQSKFVGHLALDKLKFQMQR--EMREAVSTSHCSQPNSLEYDMAIEWSLLQ 340
S G +GHL ++ ++ +++ E ++AVSTSHCSQPN++EYD+A++W L++
Sbjct: 415 SKGLLKVPKPSETLLGHLTINNIRMGIRQREEQKKAVSTSHCSQPNTMEYDLALDWMLVR 474
Query: 341 ERLDCAWKKLYEQQELELKKLKVKL 365
+ + ++ L+++ + E K K+
Sbjct: 475 AKQETKFRTLHKKHKDERKTFASKM 499
>gi|115438452|ref|NP_001043543.1| Os01g0610300 [Oryza sativa Japonica Group]
gi|53791478|dbj|BAD52530.1| unknown protein [Oryza sativa Japonica Group]
gi|113533074|dbj|BAF05457.1| Os01g0610300 [Oryza sativa Japonica Group]
gi|215717121|dbj|BAG95484.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 146/265 (55%), Gaps = 18/265 (6%)
Query: 105 PKPTLATIADEDKSKTKRAVAKDPHGIDKG--PCKKPKLDEELLKPTSGKLVEASSLQPS 162
P P +A + +E SK+ + K + G P K+ K E V ++
Sbjct: 249 PPPHVA-LKEESVSKSTENITKPAQKVLPGERPPKRVKFSEN---------VTVQNVPLD 298
Query: 163 IVENKSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVED 222
+ E S +E+ R + DRSKWFK +PW+ R+R A E GTLV ++NLD + + +E+
Sbjct: 299 VPERPSRTGPLELAGRQA-DRSKWFK-IPWDTRLRNADEQGTLVYIQNLDIQFAAADIEE 356
Query: 223 LVWHAFKENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLG 282
L+ A + NC AK I + P G+++ IFKT+ A+ ++K+ G L+ GRPL
Sbjct: 357 LIRDALQLNCIAKPINHPTYDDPNNGKAYAIFKTKSAADSAISKINSG--LVVGGRPLYC 414
Query: 283 SIGTPCFTGKQSKFVGHLALDKLKFQMQR--EMREAVSTSHCSQPNSLEYDMAIEWSLLQ 340
S G +GHL ++ ++ +++ E ++AVSTSHCSQPN++EYD+A++W L++
Sbjct: 415 SKGLLKVPKPSETLLGHLTINNIRMGIRQREEQKKAVSTSHCSQPNTMEYDLALDWMLVR 474
Query: 341 ERLDCAWKKLYEQQELELKKLKVKL 365
+ + ++ L+++ + E K K+
Sbjct: 475 AKQETKFRTLHKKHKDERKTFASKM 499
>gi|218188641|gb|EEC71068.1| hypothetical protein OsI_02820 [Oryza sativa Indica Group]
Length = 442
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 109/172 (63%), Gaps = 5/172 (2%)
Query: 182 DRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPRVA 241
DRSKWFK +PW+ R+R A E GTLV ++NLD + + +E+L+ A + NC AK I
Sbjct: 226 DRSKWFK-IPWDTRLRNADEQGTLVYIQNLDIQFAAADIEELIRDALQLNCIAKPINHPT 284
Query: 242 FASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLA 301
+ P G+++ IFKT+ A+ ++K+ G L+ GRPL S G +GHL
Sbjct: 285 YDDPNNGKAYAIFKTKSAADSAISKINSG--LVVGGRPLYCSKGLLKVPKPSETLLGHLT 342
Query: 302 LDKLKFQMQR--EMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLY 351
++ ++ +++ E ++AVSTSHCSQPN++EYD+A++W L++ + + ++ L+
Sbjct: 343 INNIRMGIRQREEQKKAVSTSHCSQPNTMEYDLALDWMLVRAKQETKFRTLH 394
>gi|212275658|ref|NP_001130637.1| uncharacterized protein LOC100191737 [Zea mays]
gi|194689704|gb|ACF78936.1| unknown [Zea mays]
gi|413924690|gb|AFW64622.1| hypothetical protein ZEAMMB73_727021 [Zea mays]
Length = 531
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 113/176 (64%), Gaps = 4/176 (2%)
Query: 180 SLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPR 239
++DRSKWF + W +R+++A + GTLV ++NLD + +E+LV A + NC+AK I
Sbjct: 341 NIDRSKWFN-IEWNDRLKMADDKGTLVYIQNLDIRFGPADIEELVRKALQLNCTAKPINH 399
Query: 240 VAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGH 299
+ P G+++ IF+T++ A+ ++K+ G L+ GRPL S G + VGH
Sbjct: 400 PTYDDPNNGKAYAIFRTKDAADAAISKINSG--LVVGGRPLYCSKGLLEVPKPSANLVGH 457
Query: 300 LALDKLKFQMQR-EMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQ 354
L+ Q QR E ++AV+TSHCSQPN++EYD+A++W LL+E+ D +++ L+++
Sbjct: 458 LSSYVKIGQKQRDEQKKAVATSHCSQPNTIEYDLALDWMLLREKQDQSFRVLHKKH 513
>gi|242067251|ref|XP_002448902.1| hypothetical protein SORBIDRAFT_05g001150 [Sorghum bicolor]
gi|241934745|gb|EES07890.1| hypothetical protein SORBIDRAFT_05g001150 [Sorghum bicolor]
Length = 528
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
Query: 180 SLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPR 239
++DRSKWF + W++R+++A + GTLV ++NLD + +E+LV A + +C+AK I
Sbjct: 337 NIDRSKWFN-IEWDDRLKMADDKGTLVYIQNLDIRFGPADIEELVRKALQLSCNAKPINH 395
Query: 240 VAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGH 299
+ P G+++ IFKT++ A+ ++K+ G L+ GRPL S G VGH
Sbjct: 396 PTYDDPNNGKAYAIFKTKDAADAAISKINSG--LVVGGRPLYCSKGLLEVPKPPKNLVGH 453
Query: 300 LALD-KLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELEL 358
L+ K+ + + E +AV+TSHCSQPN++EYD+A++W LL+E+ D +++ L+++ E
Sbjct: 454 LSSHVKIGHKQRDEQSKAVATSHCSQPNTIEYDLALDWMLLREKQDQSFRILHKKHR-EA 512
Query: 359 KKLKVKLKSK 368
+K+ L +K
Sbjct: 513 RKVFASLGNK 522
>gi|297830142|ref|XP_002882953.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328793|gb|EFH59212.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N ++E ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VEDL AF
Sbjct: 325 NPPLIEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEDLCRQAF 384
Query: 229 KENCSAKMIPRVAFASPYFG--QSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGT 286
KE AKMIP +SP+ G ++ VIF T + A+ +++L E CL+L RPLLGS
Sbjct: 385 KEAVDAKMIPSSLVSSPHSGICRALVIFGTTKAADSAMSQLTEKCLMLPGQRPLLGSKKV 444
Query: 287 PCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
P G+ F GH ++ + R M S C
Sbjct: 445 PLEIGRCRSFTGHFSM------VDRSMMTTQKVSCC 474
>gi|186510115|ref|NP_001118639.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|186510117|ref|NP_001118640.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|98961661|gb|ABF59160.1| hypothetical protein At3g15605 [Arabidopsis thaliana]
gi|332642177|gb|AEE75698.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|332642178|gb|AEE75699.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 397
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N +VE ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VE L AF
Sbjct: 196 NPPLVEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEFLFRQAF 255
Query: 229 KENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPC 288
KE AKMIP +SP+ G++ VIF T + A+ +++L E CL+LS R L GS P
Sbjct: 256 KEGVDAKMIPSSPMSSPHSGRALVIFGTTKAADSAMSRLNEDCLMLSGQRALTGSKNVPV 315
Query: 289 FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
G+ F GH + + R + A S C
Sbjct: 316 EIGRCRSFTGHFNM------VDRSLMTAQKVSCC 343
>gi|116831212|gb|ABK28560.1| unknown [Arabidopsis thaliana]
Length = 398
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N +VE ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VE L AF
Sbjct: 196 NPPLVEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEFLFRQAF 255
Query: 229 KENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPC 288
KE AKMIP +SP+ G++ VIF T + A+ +++L E CL+LS R L GS P
Sbjct: 256 KEGVDAKMIPSSPMSSPHSGRALVIFGTTKAADSAMSRLNEDCLMLSGQRALTGSKNVPV 315
Query: 289 FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
G+ F GH + + R + A S C
Sbjct: 316 EIGRCRSFTGHFNM------VDRSLMTAQKVSCC 343
>gi|334185373|ref|NP_001189902.1| nucleic acid binding protein [Arabidopsis thaliana]
gi|332642179|gb|AEE75700.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N +VE ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VE L AF
Sbjct: 280 NPPLVEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEFLFRQAF 339
Query: 229 KENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPC 288
KE AKMIP +SP+ G++ VIF T + A+ +++L E CL+LS R L GS P
Sbjct: 340 KEGVDAKMIPSSPMSSPHSGRALVIFGTTKAADSAMSRLNEDCLMLSGQRALTGSKNVPV 399
Query: 289 FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
G+ F GH + + R + A S C
Sbjct: 400 EIGRCRSFTGHFNM------VDRSLMTAQKVSCC 427
>gi|11994332|dbj|BAB02291.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 6/154 (3%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N +VE ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VE L AF
Sbjct: 403 NPPLVEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEFLFRQAF 462
Query: 229 KENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPC 288
KE AKMIP +SP+ G++ VIF T + A+ +++L E CL+LS R L GS P
Sbjct: 463 KEGVDAKMIPSSPMSSPHSGRALVIFGTTKAADSAMSRLNEDCLMLSGQRALTGSKNVPV 522
Query: 289 FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
G+ F GH + + R + A S C
Sbjct: 523 EIGRCRSFTGHFNM------VDRSLMTAQKVSCC 550
>gi|186510113|ref|NP_188181.2| nucleic acid binding protein [Arabidopsis thaliana]
gi|98961659|gb|ABF59159.1| hypothetical protein At3g15605 [Arabidopsis thaliana]
gi|332642176|gb|AEE75697.1| nucleic acid binding protein [Arabidopsis thaliana]
Length = 399
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 8/156 (5%)
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
N +VE ++++ W+K+LP+E+ ++ A E G ++++ENL+PSYTS VE L AF
Sbjct: 196 NPPLVEKAPSQNIEKKSWYKKLPFEDELKPAIEKGRVLLIENLEPSYTSLEVEFLFRQAF 255
Query: 229 KENCSAKMIPRVAFASPYFG--QSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGT 286
KE AKMIP +SP+ G ++ VIF T + A+ +++L E CL+LS R L GS
Sbjct: 256 KEGVDAKMIPSSPMSSPHSGICRALVIFGTTKAADSAMSRLNEDCLMLSGQRALTGSKNV 315
Query: 287 PCFTGKQSKFVGHLALDKLKFQMQREMREAVSTSHC 322
P G+ F GH + + R + A S C
Sbjct: 316 PVEIGRCRSFTGHFNM------VDRSLMTAQKVSCC 345
>gi|226502368|ref|NP_001143270.1| uncharacterized protein LOC100275800 [Zea mays]
gi|195616822|gb|ACG30241.1| hypothetical protein [Zea mays]
Length = 160
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 248 GQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLALDKLKF 307
G+++ IF+T++ A+ ++K+ G L+ GRPL S G + VGHL+
Sbjct: 37 GKAYAIFRTKDAADAAISKINSG--LVVGGRPLYCSKGLLEVPKPSANLVGHLSSYVKIG 94
Query: 308 QMQR-EMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQ 354
Q QR E ++AV+TSHCSQPN++EYD+A++W LL+E+ D +++ L+++
Sbjct: 95 QKQRDEQKKAVATSHCSQPNTIEYDLALDWMLLREKQDQSFRVLHKKH 142
>gi|224089068|ref|XP_002308622.1| predicted protein [Populus trichocarpa]
gi|222854598|gb|EEE92145.1| predicted protein [Populus trichocarpa]
Length = 545
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 101/184 (54%), Gaps = 11/184 (5%)
Query: 2 KSSLGEKVSSIGGAQQGEIVRTIKPGITFGDKIASSSK--VGFEKSKAKSSKALET--KE 57
K S GE +S G GE+ + + D IASSSK VG+ +SK A + +E
Sbjct: 267 KCSPGENSASNLGL--GEMTKVDEQEGIPSDIIASSSKDDVGWSESKVDKVFADQVLIEE 324
Query: 58 EVKSFKDPNELYNGPSNKAKFDS-SRKVFDDKIKNRVQKLGLDSNVHGPKPTLATI-ADE 115
+VK KD +L + PS KAK D ++ +D+K+K VQK+ DSN K T A E
Sbjct: 325 KVKVAKDCGDLDDRPSKKAKLDDLAKASYDNKVKG-VQKVSHDSNGSNSKSVAQTTPASE 383
Query: 116 DKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVEV 175
DKSK+ + KD H + G K+PK DE+L + +GK EAS Q S +K+N I EV
Sbjct: 384 DKSKSN--LTKDHHENNSGLSKRPKPDEKLTRLANGKFPEASLRQSSEEGSKTNCHIQEV 441
Query: 176 TRRP 179
TRRP
Sbjct: 442 TRRP 445
>gi|413924689|gb|AFW64621.1| hypothetical protein ZEAMMB73_727021 [Zea mays]
Length = 318
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 294 SKFVGHLALDKLKFQMQR-EMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYE 352
+ VGHL+ Q QR E ++AV+TSHCSQPN++EYD+A++W LL+E+ D +++ L++
Sbjct: 239 ANLVGHLSSYVKIGQKQRDEQKKAVATSHCSQPNTIEYDLALDWMLLREKQDQSFRVLHK 298
Query: 353 QQ 354
+
Sbjct: 299 KH 300
>gi|168027615|ref|XP_001766325.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682539|gb|EDQ68957.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 909
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 232 CSAKMIPRVAFASPYFGQSFVI-FKTREVAELVVTKLEEGCLLLSNGRPLLGSIG--TPC 288
C ++ P V+F Y S ++ + + A+ + K+E C++++N RPL + T
Sbjct: 783 CEVRIAPPVSFN--YNTTSALLKLPSAKKADEFLHKMESSCVVVAN-RPLTATRFDITDF 839
Query: 289 FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWK 348
SK+ GHL L + + R AV+TSH +Q N++E+ + W +L E+ W+
Sbjct: 840 KKSHPSKYPGHLDLALGRDFAVEDPRSAVTTSHLAQGNTIEFAFGVPWRVLDEQHQLQWQ 899
Query: 349 KLYEQQE 355
L ++ +
Sbjct: 900 ILQDRHD 906
>gi|299820861|ref|ZP_07052750.1| plasmid partition ParB protein [Listeria grayi DSM 20601]
gi|299817882|gb|EFI85117.1| plasmid partition ParB protein [Listeria grayi DSM 20601]
Length = 283
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 159 LQPSIVEN-KSNKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTS 217
LQP I+ N K QIV RR + KE+P R E L V+ENL S
Sbjct: 60 LQPIILRNAKKGYQIVVGERRFRASKEAGLKEIPAVVRDMTDAEMMELSVIENLQREDLS 119
Query: 218 TVVEDLVWHAFKEN---CSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLL 274
+ E + N +K+ RV + PY +FV T + E+V L +G L
Sbjct: 120 PMEEAESYQFLMSNLELTQSKLAERVGKSRPYIA-NFVRLLT--LPEVVQDYLRDGSLSA 176
Query: 275 SNGRPLLG 282
+GR LLG
Sbjct: 177 GHGRALLG 184
>gi|413924691|gb|AFW64623.1| hypothetical protein ZEAMMB73_727021 [Zea mays]
Length = 387
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 180 SLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVE 221
++DRSKWF + W +R+++A + GTLV ++NLD + +E
Sbjct: 341 NIDRSKWFN-IEWNDRLKMADDKGTLVYIQNLDIRFGPADIE 381
>gi|346975055|gb|EGY18507.1| calcium-channel protein cch1 [Verticillium dahliae VdLs.17]
Length = 2101
Score = 41.2 bits (95), Expect = 0.83, Method: Composition-based stats.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 62 FKDPNELYNGPSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPTLATIADEDKSKTK 121
+ PN Y+ P+N F+S ++ + LG+ P+ +L T++D D S ++
Sbjct: 100 YDSPNPYYDEPTNPDYFESDSVPLTSHVQPIARSLGVREAEAQPRDSLQTVSDIDASPSR 159
Query: 122 -RAVAKDPHGIDKGPCKKPKLDEELL---------KPTSGKLVEASSLQPSI---VENKS 168
R V + ++ G + + L TS L A S+ ++ V N S
Sbjct: 160 GRDVRSLGYDLEPGAAGRLSYGQTLTPGDNRRSRSPSTSEALHRAGSIMRAMSQRVVNIS 219
Query: 169 NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF 228
+ + R S RS+ P E+R R + G + N+D SY S + H
Sbjct: 220 SGEGELADHRTSFQRSR----SPSEDRRRQQYNSGHMF---NVDTSYPSHTTQ----HPV 268
Query: 229 KENCSAKMI---PRVAFAS------PYFGQSFVIFKTREV 259
++ + + P V+ AS P G+S +F ++ +
Sbjct: 269 EKEPAGGFLSVDPHVSVASRPPMSNPLKGKSLGVFSSKSI 308
>gi|123499852|ref|XP_001327713.1| Beige/BEACH domain containing protein [Trichomonas vaginalis G3]
gi|121910646|gb|EAY15490.1| Beige/BEACH domain containing protein [Trichomonas vaginalis G3]
Length = 2371
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 28 ITFGDKIASSSKVGFEKSKAKSSKALETKEEVKSFKDPNELYNGPSNKAKFDSSRKVFDD 87
I F +KI S + F K +K E KEE +++PNE+YN + +FD + + ++
Sbjct: 1032 IDFYNKILSVYRKYFFLPDEKKTKVKEIKEENNDYENPNEMYN-EMKEIEFDKNNNLQNE 1090
Query: 88 KIKNR---VQKLGL--------DSNVHGPKPTLATIADEDK--SKTKRAVAKDPHGIDKG 134
K+ N +K + D+N+ I DE+K K + + I +
Sbjct: 1091 KVTNDQKVTEKQNILENKNSQNDNNLDQKVTNHQNILDENKIIQNEKSNLEEKVIEISEN 1150
Query: 135 PCKKPKLDEELLKPTSGKLVEASSLQPSIVENKSNKQIVEVTRR 178
K LD+ K S K+ E+ +LQ N + + +VT +
Sbjct: 1151 QDNKSDLDQ---KSLSEKVTESENLQNEKDSNNNENNVQKVTNK 1191
>gi|327269018|ref|XP_003219292.1| PREDICTED: paraspeckle component 1-like [Anolis carolinensis]
Length = 529
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + + + V G+ FV
Sbjct: 151 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVE 205
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 206 FAAKPPARKALERCSDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 258
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +K+ K KL+++
Sbjct: 259 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIKEAKEKLEAE 310
>gi|26383339|dbj|BAB30876.2| unnamed protein product [Mus musculus]
Length = 523
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|345319024|ref|XP_001518809.2| PREDICTED: paraspeckle component 1-like [Ornithorhynchus anatinus]
Length = 407
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 32 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 86
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 87 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 139
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 140 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 191
>gi|301780592|ref|XP_002925711.1| PREDICTED: paraspeckle component 1-like [Ailuropoda melanoleuca]
gi|281340049|gb|EFB15633.1| hypothetical protein PANDA_015253 [Ailuropoda melanoleuca]
Length = 521
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 146 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 200
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 201 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 253
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 254 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 305
>gi|115497186|ref|NP_001068745.1| paraspeckle component 1 [Bos taurus]
gi|122145871|sp|Q1LZD9.1|PSPC1_BOVIN RecName: Full=Paraspeckle component 1
gi|94534895|gb|AAI16063.1| Paraspeckle component 1 [Bos taurus]
gi|296481730|tpg|DAA23845.1| TPA: paraspeckle component 1 [Bos taurus]
Length = 520
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 145 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 199
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 200 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 252
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 253 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 304
>gi|71043686|ref|NP_001020843.1| paraspeckle component 1 [Rattus norvegicus]
gi|123785742|sp|Q4KLH4.1|PSPC1_RAT RecName: Full=Paraspeckle component 1
gi|68534606|gb|AAH99204.1| Paraspeckle component 1 [Rattus norvegicus]
gi|149064062|gb|EDM14332.1| paraspeckle protein 1 [Rattus norvegicus]
Length = 522
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|348516258|ref|XP_003445656.1| PREDICTED: non-POU domain-containing octamer-binding protein-like
[Oreochromis niloticus]
Length = 442
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKENCSAKMIPRVAFASPYFGQSFVIF 254
R+R A HG + ++NL P + S + + + F + A +I V G+ V F
Sbjct: 129 RVRFA-THGAALTVKNL-PEFVSNELLEEAFAVFGQIERAVVI--VDDRGRPTGKGIVEF 184
Query: 255 KTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQREM 313
++ A + K +G L++ + P +F L +KL + Q+
Sbjct: 185 TSKPAARKALDKCSDGAYLMT-------AFPRPVTVEPMEQFDEEEGLPEKLVNKNQQYH 237
Query: 314 REAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP S EY+ A+ W L E K+ YE + +K+ + KL+++
Sbjct: 238 KEREQPPRFAQPGSFEYEYAMRWKALME----MEKQQYEMVDRNMKEAQEKLEAE 288
>gi|432100265|gb|ELK29037.1| Paraspeckle component 1 [Myotis davidii]
Length = 521
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 146 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 200
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 201 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 253
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
++ T +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 254 HKKREQTPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 305
>gi|344284518|ref|XP_003414013.1| PREDICTED: LOW QUALITY PROTEIN: paraspeckle component 1-like
[Loxodonta africana]
Length = 522
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|225543409|ref|NP_079958.3| paraspeckle component 1 [Mus musculus]
gi|81915016|sp|Q8R326.1|PSPC1_MOUSE RecName: Full=Paraspeckle component 1; AltName: Full=Paraspeckle
protein 1; Short=mPSP1
gi|20071204|gb|AAH26772.1| Paraspeckle protein 1 [Mus musculus]
gi|26373554|dbj|BAB27509.2| unnamed protein product [Mus musculus]
gi|74178197|dbj|BAE29885.1| unnamed protein product [Mus musculus]
gi|148704243|gb|EDL36190.1| paraspeckle protein 1 [Mus musculus]
Length = 523
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|359322791|ref|XP_003639923.1| PREDICTED: LOW QUALITY PROTEIN: paraspeckle component 1 [Canis
lupus familiaris]
Length = 521
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 146 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 200
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 201 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 253
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 254 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 305
>gi|403309252|ref|XP_003945031.1| PREDICTED: paraspeckle component 1 [Saimiri boliviensis
boliviensis]
Length = 413
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 31 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 85
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 86 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 138
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 139 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 190
>gi|395520745|ref|XP_003764484.1| PREDICTED: paraspeckle component 1 [Sarcophilus harrisii]
Length = 492
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|126327540|ref|XP_001374805.1| PREDICTED: paraspeckle component 1 [Monodelphis domestica]
Length = 522
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|390463930|ref|XP_002748921.2| PREDICTED: paraspeckle component 1 isoform 2 [Callithrix jacchus]
Length = 540
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 165 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 219
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 220 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 272
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 273 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 324
>gi|417402278|gb|JAA47991.1| Putative rna-binding protein p54nrb rrm superfamily [Desmodus
rotundus]
Length = 523
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 148 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 202
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 203 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 255
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 256 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 307
>gi|66910310|gb|AAH96901.1| Si:dkey-252h13.6 protein [Danio rerio]
Length = 374
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 34/181 (18%)
Query: 78 FDSSRKVFDDKIKNRVQKLGLDS--NVHGPKPTLATIADEDKSKTKRAVAKDPHGIDKGP 135
F S+RK + IK R+++LG D + + E+++K K A AK+ H +D P
Sbjct: 131 FSSARKAVAE-IKERLEELGRDELRKISKSVNEVPVYTVENRTKEKTARAKEIHTVDSSP 189
Query: 136 CKKPKLDEELLK-------------------PTSGKLVEASSLQPSIVENKSNKQIVEVT 176
+PK E LK K++ LQP +V
Sbjct: 190 PVEPKTRSEFLKYYCQLKLDSHTAHKELYLSEGGKKVIRTRDLQPYSDNQDRFDSFAQVL 249
Query: 177 RRPSLDRSKWFKELPW--EERIRVAHE------HGTLVVLENLDPSYTSTVVEDL---VW 225
R L +++ E+ W E I VA+ G+L +L D S+ S + D W
Sbjct: 250 CREGLSGGRYYWEVEWSGEFSIGVAYRGISRKGKGSLCLLGYNDKSW-SLLCSDTGYSAW 308
Query: 226 H 226
H
Sbjct: 309 H 309
>gi|109240550|ref|NP_001035879.1| paraspeckle component 1 [Homo sapiens]
gi|114648865|ref|XP_001144461.1| PREDICTED: paraspeckle component 1 isoform 1 [Pan troglodytes]
gi|74762636|sp|Q8WXF1.1|PSPC1_HUMAN RecName: Full=Paraspeckle component 1; AltName: Full=Paraspeckle
protein 1
gi|18104577|gb|AAL59601.1|AF448795_1 paraspeckle protein 1 alpha isoform [Homo sapiens]
gi|119628637|gb|EAX08232.1| paraspeckle component 1, isoform CRA_a [Homo sapiens]
gi|410207394|gb|JAA00916.1| paraspeckle component 1 [Pan troglodytes]
gi|410253110|gb|JAA14522.1| paraspeckle component 1 [Pan troglodytes]
gi|410294364|gb|JAA25782.1| paraspeckle component 1 [Pan troglodytes]
gi|410350909|gb|JAA42058.1| paraspeckle component 1 [Pan troglodytes]
Length = 523
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 148 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 202
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 203 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 255
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 256 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 307
>gi|395848194|ref|XP_003796741.1| PREDICTED: paraspeckle component 1 [Otolemur garnettii]
Length = 523
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 148 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 202
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 203 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 255
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 256 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 307
>gi|355700858|gb|EHH28879.1| Paraspeckle protein 1 [Macaca mulatta]
Length = 459
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 84 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 138
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 139 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 191
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 192 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 243
>gi|449483811|ref|XP_002190822.2| PREDICTED: paraspeckle component 1 [Taeniopygia guttata]
Length = 527
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + + + V G+ FV
Sbjct: 151 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVE 205
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 206 FAAKPPARKALERCSDGAFLLT-------TTPRPVVVEPMEQFDDEDGLPEKLMQKTQQY 258
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 259 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 310
>gi|354479768|ref|XP_003502081.1| PREDICTED: paraspeckle component 1-like [Cricetulus griseus]
gi|344255419|gb|EGW11523.1| Paraspeckle component 1 [Cricetulus griseus]
Length = 522
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 147 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 201
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 202 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 254
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 255 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 306
>gi|194221757|ref|XP_001488693.2| PREDICTED: paraspeckle component 1-like [Equus caballus]
Length = 540
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 165 RIRFA-THGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 219
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 220 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 272
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W L E K+ EQ + +++ K KL+++
Sbjct: 273 HKEREQPPRFAQPGTFEFEYASRWKALDE----MEKQQREQVDRNIREAKEKLEAE 324
>gi|348583345|ref|XP_003477433.1| PREDICTED: paraspeckle component 1-like [Cavia porcellus]
Length = 520
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 145 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 199
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 200 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 252
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 253 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 304
>gi|355714147|gb|AES04909.1| paraspeckle component 1 [Mustela putorius furo]
Length = 449
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 75 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 129
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 130 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 182
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 183 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 234
>gi|410947109|ref|XP_003980296.1| PREDICTED: paraspeckle component 1 [Felis catus]
Length = 521
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + K + V G+ FV
Sbjct: 146 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVE 200
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 201 FAAKPPARKALERCGDGAFLLT-------TTPRPVIVEPMEQFDDEDGLPEKLMQKTQQY 253
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 254 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 305
>gi|326914371|ref|XP_003203499.1| PREDICTED: paraspeckle component 1-like, partial [Meleagris
gallopavo]
Length = 403
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 18/176 (10%)
Query: 195 RIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAFKE-NCSAKMIPRVAFASPYFGQSFVI 253
RIR A HG + ++NL P V +L+ AF + + + V G+ FV
Sbjct: 27 RIRFAT-HGAALTVKNLSP----VVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVE 81
Query: 254 FKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPCFTGKQSKFVGHLAL-DKLKFQMQRE 312
F + A + + +G LL+ + P +F L +KL + Q+
Sbjct: 82 FAAKPPARKALERCSDGAFLLT-------TTPRPVVVEPMEQFDDEDGLPEKLMQKTQQY 134
Query: 313 MREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWKKLYEQQELELKKLKVKLKSK 368
+E +QP + E++ A W LD K+ EQ + +++ K KL+++
Sbjct: 135 HKEREQPPRFAQPGTFEFEYASRWKA----LDEMEKQQREQVDRNIREAKEKLEAE 186
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,494,381,316
Number of Sequences: 23463169
Number of extensions: 220805315
Number of successful extensions: 493879
Number of sequences better than 100.0: 174
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 493621
Number of HSP's gapped (non-prelim): 324
length of query: 368
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 224
effective length of database: 8,980,499,031
effective search space: 2011631782944
effective search space used: 2011631782944
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)