Query 017671
Match_columns 368
No_of_seqs 129 out of 515
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 03:05:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rlz_A DHS, deoxyhypusine synt 100.0 3E-131 1E-135 976.3 24.4 358 4-365 6-364 (369)
2 3c2q_A Uncharacterized conserv 91.7 0.82 2.8E-05 44.9 9.8 200 94-356 134-339 (345)
3 1mvl_A PPC decarboxylase athal 67.3 5.5 0.00019 36.3 4.6 40 94-133 18-57 (209)
4 1dek_A Deoxynucleoside monopho 63.2 60 0.0021 29.7 10.9 119 99-223 3-156 (241)
5 2g2c_A Putative molybdenum cof 50.0 8.4 0.00029 33.2 2.5 23 110-133 57-79 (167)
6 3lqk_A Dipicolinate synthase s 49.6 17 0.00058 32.8 4.6 39 95-133 7-47 (201)
7 1mkz_A Molybdenum cofactor bio 48.1 9.7 0.00033 33.1 2.7 24 110-133 56-79 (172)
8 2is8_A Molybdopterin biosynthe 46.8 10 0.00035 32.6 2.6 24 110-133 49-72 (164)
9 1uuy_A CNX1, molybdopterin bio 46.1 11 0.00036 32.5 2.6 24 110-133 58-81 (167)
10 3mcu_A Dipicolinate synthase, 45.7 22 0.00075 32.3 4.7 39 95-133 5-45 (207)
11 1y5e_A Molybdenum cofactor bio 44.6 11 0.00038 32.5 2.5 24 110-133 59-82 (169)
12 1ceu_A Protein (HIV-1 regulato 44.5 13 0.00044 27.0 2.3 33 178-214 15-47 (51)
13 1p3y_1 MRSD protein; flavoprot 44.4 13 0.00045 33.3 3.0 48 95-142 8-58 (194)
14 3qjg_A Epidermin biosynthesis 44.4 20 0.0007 31.6 4.2 47 96-142 6-55 (175)
15 1qzu_A Hypothetical protein MD 43.6 21 0.00072 32.2 4.2 40 94-133 18-59 (206)
16 2pjk_A 178AA long hypothetical 43.3 12 0.00042 32.8 2.6 24 110-133 68-91 (178)
17 2pbq_A Molybdenum cofactor bio 42.7 13 0.00044 32.5 2.6 24 110-133 55-78 (178)
18 1di6_A MOGA, molybdenum cofact 41.5 13 0.00046 33.2 2.6 24 110-133 53-76 (195)
19 1jlj_A Gephyrin; globular alph 41.0 14 0.00048 32.8 2.6 24 110-133 65-88 (189)
20 3iwt_A 178AA long hypothetical 40.8 14 0.00049 31.7 2.6 23 111-133 69-91 (178)
21 3kbq_A Protein TA0487; structu 40.3 12 0.00043 32.9 2.1 23 109-133 50-72 (172)
22 1g63_A Epidermin modifying enz 40.2 23 0.00077 31.4 3.8 37 97-133 4-41 (181)
23 1rhy_A IGPD, imidazole glycero 39.7 26 0.00089 32.0 4.2 59 106-171 35-104 (202)
24 3zqu_A Probable aromatic acid 39.0 19 0.00065 32.7 3.2 38 96-133 5-43 (209)
25 3bpq_A Antitoxin RELB3, RELB; 36.7 27 0.00094 25.4 3.0 47 163-210 5-51 (52)
26 2ejb_A Probable aromatic acid 34.0 23 0.0008 31.5 2.9 37 97-133 3-40 (189)
27 1sbz_A Probable aromatic acid 31.4 26 0.00088 31.5 2.7 37 97-133 2-40 (197)
28 4as2_A Phosphorylcholine phosp 30.7 68 0.0023 30.6 5.7 47 95-144 132-178 (327)
29 3rfq_A Pterin-4-alpha-carbinol 30.5 26 0.0009 31.1 2.6 23 110-133 77-99 (185)
30 3pzy_A MOG; ssgcid, seattle st 30.3 26 0.0009 30.2 2.5 22 111-133 55-76 (164)
31 4gxt_A A conserved functionall 28.8 48 0.0016 32.4 4.4 34 107-143 222-255 (385)
32 2ae8_A IGPD, imidazoleglycerol 27.2 33 0.0011 31.8 2.7 75 91-172 36-125 (221)
33 3ezx_A MMCP 1, monomethylamine 25.2 1.5E+02 0.0053 26.3 6.8 85 37-145 104-198 (215)
34 2f1d_A IGPD 1, imidazoleglycer 24.9 41 0.0014 30.8 2.9 75 91-172 17-107 (207)
35 2cp8_A NEXT to BRCA1 gene 1 pr 22.6 84 0.0029 22.9 3.6 31 39-69 8-50 (54)
No 1
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A*
Probab=100.00 E-value=2.9e-131 Score=976.33 Aligned_cols=358 Identities=62% Similarity=1.067 Sum_probs=329.8
Q ss_pred CcccccccccccccccccCCCCCccccccccCCCCCHHHHHHHHhhcCcccccHHHHHHHHHHHHhccccCCCCCccccc
Q 017671 4 NSNVMASVHSTVFKESESLEGKGTKIEGYDFNQGVNYSQLLKSMVSTGFQASNFGDAIEVVNQMLDWRLADEVIPEDCDE 83 (368)
Q Consensus 4 ~~~~~~~~~~avl~~s~~~~~~~~~V~g~d~~~~~~~~~L~~~~~~~GFqA~~l~~A~~i~~~M~~~~~~d~~~~~~~~~ 83 (368)
+...|+.|+++||++|++++....+|+|+||++++++++|+++|.+|||||++|++|++|+++|++||+++. .|+.++
T Consensus 6 ~~~~~~~~~~~v~~~s~~~~~~~~~V~g~d~~~~~~~~~Ll~s~~~~GFqA~~Lg~Ai~ii~~Ml~~r~~~~--~~~~~~ 83 (369)
T 1rlz_A 6 EREAPAGALAAVLKHSSTLPPESTQVRGYDFNRGVNYRALLEAFGTTGFQATNFGRAVQQVNAMIEKKLEPL--SQDEDQ 83 (369)
T ss_dssp ---CCHHHHHHHTCCCCCCCTTCCCCCCCCGGGCCCHHHHHHGGGGTCHHHHHHHHHHHHHHHHHHHHTCCC--------
T ss_pred cccCchhhhhCeEecccCCCCCCCeeeccccCCCCCHHHHHHHHHhcCcchHHHHHHHHHHHHHHHhhccCc--cccccc
Confidence 445678899999999999998888999999999999999999999999999999999999999999997653 355666
Q ss_pred ccC-CccccccccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcCccccCCCCCchhHHhCCC
Q 017671 84 RER-DPEYRKSVRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGL 162 (368)
Q Consensus 84 ~~~-~~~~~~~~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~~y~G~~~~dd~~Lr~~gi 162 (368)
+++ +++.|++.+|||||||||||+|||||++|++|||+|||||||||||||||||+||||+||+|+|.+||.+||++||
T Consensus 84 ~~~~d~~~~~~~~~tIFLg~tgnmissGlR~iI~~Li~~~~VDvIVTTgggiehD~ik~lg~~y~G~f~~dd~~Lr~~gi 163 (369)
T 1rlz_A 84 HADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGI 163 (369)
T ss_dssp -----------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCTTCCHHHHHHTTE
T ss_pred cccccchhcccCCCeEEEEccccccchhHHHHHHHHHHcCCeeEEEccCCchHHHHHHHhccceecCCCCChHHHHHcCC
Confidence 666 7889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeecCccHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccCCCchHHHHHHHCCCceecCCCCchhHHH
Q 017671 163 NRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGD 242 (368)
Q Consensus 163 nRigdv~ip~e~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~~e~Sil~~A~k~~VPVf~Pa~tDgsiG~ 242 (368)
||||||||||++||+||+||++||++|+++|+.++..|||+||+++||++|++|+||||||||||||||||||+|||+|+
T Consensus 164 nRIgn~~ip~e~y~~~E~~i~~i~~~~~~~q~~~~~~~s~~e~i~~lGk~i~~e~Sil~~Ayk~~VPVf~Pa~tDgsiG~ 243 (369)
T 1rlz_A 164 NRIGNLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLGD 243 (369)
T ss_dssp EEETTEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCTTCHHHHHHHTTCCEECTTTTSSHHHH
T ss_pred CcccceeeccHHHHHHHHHHHHHHHHHHHhhhccCCcCcHHHHHHHHhhhcCCCCcHHHHHHHcCCCEECCCcchhhHHH
Confidence 99999999999999999999999999998887777899999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCCcEeehHHHHHHHHHHHhhcCCCceeEEEEcCCCchhhhhhcccccCCceEEEEEecCCCCCCCCCCCCc
Q 017671 243 MLYFHSFRSPGLIIDIVQDIRAINGEAVHASPRKTGLIILGGGLPKHHICNANMMRNGADYAVFINTAQEFDGSDSGARP 322 (368)
Q Consensus 243 ~l~~~~~~~~~~~~D~v~D~~~l~~i~~~s~~~~~G~iilGGGVpKh~i~~~~l~r~G~DYaVqItta~e~dGslSGA~p 322 (368)
|+|+|+++++++++|+++|+++|+++++++ +++|+|||||||||||||||||+|+|+|||||||||+|+|||||||||
T Consensus 244 ~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a--~ktG~iilGGGvpKh~i~~a~l~r~G~dyaV~Itta~e~dGslSGA~p 321 (369)
T 1rlz_A 244 MIFFHSYKNPGLVLDIVEDLRLINTQAIFA--KCTGMIILGGGVVKHHIANANLMRNGADYAVYINTAQEFDGSDSGARP 321 (369)
T ss_dssp HHHHHHHHSTTCCCCSHHHHHHHHHHHHTC--SSEEEEEESCHHHHHHHHHHHHTTTSBSEEEEEECCCSTTCCSTTCCH
T ss_pred HHHHHhccCCceeeehHhhHHHHHHHHHhc--ccceEEEECCCcchHHHHhhhcccCCCCEEEEEecCCCCcCcccCCCh
Confidence 999999998899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cchhhcccccCCCCcEEEEeehhhhHHHHHHHHHhcccccccc
Q 017671 323 DEAVSWGKIRGSAKTVKVHCDATIAFPLLVAETFASRRNKFVE 365 (368)
Q Consensus 323 ~EAiSWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~ 365 (368)
+||||||||+++++.|+|||||||+||||++++|++..+++++
T Consensus 322 ~EAvSWGKi~~~a~~v~V~~DATIv~PLlva~~~~~~~~~~~~ 364 (369)
T 1rlz_A 322 DEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFAQKMDAFMH 364 (369)
T ss_dssp HHHHHHTSBCTTCCCEEEESCHHHHHHHHHHHTGGGGHHHHHH
T ss_pred hhhhccccccCCCCeEEEEEeehHHHHHHHHHHHHhhhhcccc
Confidence 9999999999999999999999999999999999998876654
No 2
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=91.70 E-value=0.82 Score=44.89 Aligned_cols=200 Identities=18% Similarity=0.165 Sum_probs=125.0
Q ss_pred ccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcCccccCCCCCchhHHhCCCcceeeeeecCc
Q 017671 94 VRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAPTFKGDFALPGAYLRSKGLNRIGNLLVPND 173 (368)
Q Consensus 94 ~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~~y~G~~~~dd~~Lr~~ginRigdv~ip~e 173 (368)
.+.+|.+-.-=+.+-+|-|..++.|||+||||++.+==|--.|||=.+|=.+-+|- +=-.-..+|.-
T Consensus 134 ~gG~Iv~V~GPAvvhtga~~ala~LIr~GYV~~LlaGNAlAtHDiE~~l~gTsLG~-------------di~t~~~v~~G 200 (345)
T 3c2q_A 134 GTGGIAIVGGPAIIHTGGGPALAKMVELGYIQAILAGNALATHDIESALYGTSLGV-------------NIKTAKPVTGG 200 (345)
T ss_dssp SSCCEEEEECTHHHHTTCHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHSEETTE-------------ETTTCCBCTTG
T ss_pred CCCeEEEEecCeEecCCcHHHHHHHHHcCccceEeccchHhHhhHHHHhhccccCc-------------cccccccCCCc
Confidence 46777777777888999999999999999999999755558999998774333331 11112235666
Q ss_pred cHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccCCCchHHHHHHHCCCceecCCCCchhHHHHHHHhHhcC--
Q 017671 174 NYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEINDESSYLYWAYKNNIPVFCPGLTDGSLGDMLYFHSFRS-- 251 (368)
Q Consensus 174 ~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~~e~Sil~~A~k~~VPVf~Pa~tDgsiG~~l~~~~~~~-- 251 (368)
+|..++ .|..|.. .=|..+++..= .=.++|.|+|-|||||...-| || +..+
T Consensus 201 H~~Hl~-~IN~irr-----------~GSI~~aVe~G----~l~~GImy~cvk~~VPfVLAG----SI-------RDDGPL 253 (345)
T 3c2q_A 201 HKHHIY-AINAIND-----------AGNIKNAVESG----VLKEGIMYQCIKNNIPYVLAG----SI-------RDDGPI 253 (345)
T ss_dssp GGHHHH-HHHHHHH-----------HSSHHHHHHTT----SCCSSHHHHHHHTTCCEEEEC----CT-------TCSSCC
T ss_pred hHHHHH-HHHHHHH-----------cCCHHHHHHhC----CCccchHHHHHhCCCCEEEEe----ec-------cCCCCC
Confidence 665543 2333331 12555555432 236899999999999987643 22 1122
Q ss_pred CCcEeehHHHHHHHHHHHhhcCCCceeE-EEEcCCCchhhhhhcccccCCce-EEEEEecCCCCCCCCCCCCccchhhcc
Q 017671 252 PGLIIDIVQDIRAINGEAVHASPRKTGL-IILGGGLPKHHICNANMMRNGAD-YAVFINTAQEFDGSDSGARPDEAVSWG 329 (368)
Q Consensus 252 ~~~~~D~v~D~~~l~~i~~~s~~~~~G~-iilGGGVpKh~i~~~~l~r~G~D-YaVqItta~e~dGslSGA~p~EAiSWG 329 (368)
|++.-|+.+=-++|...+ ++.++ |++. .-=|-|---|+.-...- |+|=||.+.. .
T Consensus 254 Pdvitdv~~AQ~~mr~~~-----~~a~~vimla--TmLHSIAtGNm~Ps~v~~~cVDInp~~V----------------t 310 (345)
T 3c2q_A 254 PDVITDSMVAQDKMRTTV-----MDKKMVIMLS--TLLHSVATGNLMPSYIKTVCVDIQPSTV----------------T 310 (345)
T ss_dssp TTCBCBHHHHHHHHHHHH-----TTCSEEEEES--CHHHHHHHHTTCCTTSEEEEEESCHHHH----------------H
T ss_pred CcccccHHHHHHHHHHHh-----ccCCchHHHH--HHHHHHHhcccCcccceEEEEECCHHHh----------------h
Confidence 456667666555554443 33344 4432 22355555566544333 6666664322 3
Q ss_pred cccC--CCCcEEEEeehhhhHHHHHHHHH
Q 017671 330 KIRG--SAKTVKVHCDATIAFPLLVAETF 356 (368)
Q Consensus 330 Ki~~--~a~~v~V~~DATIv~PLlva~~~ 356 (368)
|+.. ....+-|-+|+-..+|+|...+.
T Consensus 311 KL~DRGs~qa~giVTdvg~Fl~~L~~~L~ 339 (345)
T 3c2q_A 311 KLMDRGTSQAIGVVTDVGVFLVLLLKELE 339 (345)
T ss_dssp HHHHTCCSSEEEEESCHHHHHHHHHHHHH
T ss_pred hhhccCceeEEEEEecHHHHHHHHHHHHH
Confidence 4432 34778999999999999987764
No 3
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=67.34 E-value=5.5 Score=36.32 Aligned_cols=40 Identities=15% Similarity=0.167 Sum_probs=35.4
Q ss_pred ccceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCc
Q 017671 94 VRCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 94 ~~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
.+-+|.|++||+.-.--.-++++.|.++|-|++|+|-+|.
T Consensus 18 ~~k~IllgvTGsiaa~k~~~ll~~L~~~g~V~vv~T~~A~ 57 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSL 57 (209)
T ss_dssp -CCEEEEEECSSGGGGGHHHHHHHHHTTSEEEEEECTGGG
T ss_pred CCCEEEEEEeCcHHHHHHHHHHHHHhcCCCEEEEEcchHH
Confidence 4568999999999888888999999999999999999885
No 4
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=63.15 E-value=60 Score=29.68 Aligned_cols=119 Identities=17% Similarity=0.196 Sum_probs=68.7
Q ss_pred EEccccccchhhhHHHHHHHHh-cCceeEEEeCCCchhHHHHHhhcCc-cccC-CCCCchhHHhCCCcceeeeeecCccH
Q 017671 99 FLGFTSNLISSGVRDTVRYLVQ-HHMVDVVVTTAGGIEEDLVKCLAPT-FKGD-FALPGAYLRSKGLNRIGNLLVPNDNY 175 (368)
Q Consensus 99 fL~~tgnmvssGlr~~i~~Li~-~~~VD~IVtTgg~lehDi~~~l~~~-y~G~-~~~dd~~Lr~~ginRigdv~ip~e~y 175 (368)
.+++|| .+.||=-.+-+.|.+ .|+. ++.-|..+-+-+.+.+|.. +.-. ..++...+...|++|=.++.++ ++
T Consensus 3 ~i~ltG-~~~sGK~tv~~~l~~~~g~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~g~~~dRe~~~~~~--~~ 77 (241)
T 1dek_A 3 LIFLSG-VKRSGKDTTADFIMSNYSAV--KYQLAGPIKDALAYAWGVFAANTDYPCLTRKEFEGIDYDRETNLNLT--KL 77 (241)
T ss_dssp EEEEEC-CTTSSHHHHHHHHHHHSCEE--ECCTTHHHHHHHHHHHHHHSTTSSSCCCCHHHHTTTTSCTTSCCCCC--HH
T ss_pred EEEEEC-CCCCCHHHHHHHHHHhcCCe--EEecChHHHHHHHHHccccccccccccCCHhhhcccccccccccccc--hh
Confidence 678898 477887777777777 4755 5788888999999988731 1101 2344344444566776654332 33
Q ss_pred HHHHHHHHHHHHHHHH----------------------------hhcccCcccCHHHHHHHhcccc----CCCchHHHHH
Q 017671 176 CKFEDWIIPIFDQMLK----------------------------EQNEEEISWTPSKVIARLGKEI----NDESSYLYWA 223 (368)
Q Consensus 176 ~~~E~~i~~il~~l~~----------------------------~q~~~~~~~t~~e~~~~lG~~i----~~e~Sil~~A 223 (368)
..++ ++..-++.|.. --......|++++++...|.+. .+++-|...|
T Consensus 78 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~R~l~~~~G~d~~R~~~~~~~~~~~~ 156 (241)
T 1dek_A 78 EVIT-IMEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKITDVINNIEDQWSVRRLMQALGTDLIVNNFDRMYWVKLF 156 (241)
T ss_dssp HHHH-HHHHHHHHHHTTSCCTTCCEEESSSCEEECHHHHHHHHHHHHTCCSCCCHHHHHHHHHTTTHHHHTCTTHHHHHH
T ss_pred HHHH-HHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhcccCCCCHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 4444 33332222210 0001233689999999999732 3455566544
No 5
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=50.00 E-value=8.4 Score=33.23 Aligned_cols=23 Identities=13% Similarity=0.310 Sum_probs=18.2
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.+++++ .|+||||||.
T Consensus 57 ~I~~~l~~a~~~~-~DlVittGG~ 79 (167)
T 2g2c_A 57 TVVEAIATALKQG-ARFIITAGGT 79 (167)
T ss_dssp HHHHHHHHHHHTT-CSEEEEESCC
T ss_pred HHHHHHHHHHhCC-CCEEEECCCC
Confidence 4667777777755 8999999994
No 6
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=49.56 E-value=17 Score=32.78 Aligned_cols=39 Identities=23% Similarity=0.121 Sum_probs=32.4
Q ss_pred cceEEEccccccchh-hhHHHHHHHHhcC-ceeEEEeCCCc
Q 017671 95 RCKVFLGFTSNLISS-GVRDTVRYLVQHH-MVDVVVTTAGG 133 (368)
Q Consensus 95 ~~tIfL~~tgnmvss-Glr~~i~~Li~~~-~VD~IVtTgg~ 133 (368)
+.+|.||+||+.-.- -.-++++.|.+.| -|++|+|.+|-
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 468999999996555 5667999999988 59999999885
No 7
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=48.09 E-value=9.7 Score=33.08 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=19.5
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.+++++-.|+||||||.
T Consensus 56 ~i~~~l~~a~~~~~~DlVittGG~ 79 (172)
T 1mkz_A 56 AIRAQVSAWIASDDVQVVLITGGT 79 (172)
T ss_dssp HHHHHHHHHHHSSSCCEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEeCCCC
Confidence 467778888887668999999995
No 8
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=46.84 E-value=10 Score=32.59 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=19.1
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.++++.-.|+||||||.
T Consensus 49 ~i~~~l~~~~~~~~~DlVittGG~ 72 (164)
T 2is8_A 49 MIKKVLRLWADREGLDLILTNGGT 72 (164)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCC
Confidence 467778888776568999999994
No 9
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=46.07 E-value=11 Score=32.51 Aligned_cols=24 Identities=17% Similarity=0.361 Sum_probs=18.6
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.+++..-.|+||||||.
T Consensus 58 ~i~~~l~~~~~~~~~DlVittGG~ 81 (167)
T 1uuy_A 58 RIKDILQKWSDVDEMDLILTLGGT 81 (167)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 466777777765568999999995
No 10
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=45.72 E-value=22 Score=32.26 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=29.3
Q ss_pred cceEEEccccccchhh-hHHHHHHHHhcC-ceeEEEeCCCc
Q 017671 95 RCKVFLGFTSNLISSG-VRDTVRYLVQHH-MVDVVVTTAGG 133 (368)
Q Consensus 95 ~~tIfL~~tgnmvssG-lr~~i~~Li~~~-~VD~IVtTgg~ 133 (368)
+-+|.|++||+...-- .-++++.|.+.| -|++|+|-+|.
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4689999999854443 568999999988 58999999886
No 11
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=44.59 E-value=11 Score=32.51 Aligned_cols=24 Identities=29% Similarity=0.347 Sum_probs=19.2
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.+++..-.|+||||||.
T Consensus 59 ~i~~~l~~~~~~~~~DlVittGG~ 82 (169)
T 1y5e_A 59 SIQQAVLAGYHKEDVDVVLTNGGT 82 (169)
T ss_dssp HHHHHHHHHHTCTTCSEEEEECCC
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCC
Confidence 467778888875568999999995
No 12
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=44.48 E-value=13 Score=27.04 Aligned_cols=33 Identities=21% Similarity=0.609 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHhhcccCcccCHHHHHHHhccccC
Q 017671 178 FEDWIIPIFDQMLKEQNEEEISWTPSKVIARLGKEIN 214 (368)
Q Consensus 178 ~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG~~i~ 214 (368)
.++|+.++|+++-.+. .+-+|+++++.||.+|-
T Consensus 15 ~~eW~le~LeElk~EA----vrHFpr~~L~~lgqyiy 47 (51)
T 1ceu_A 15 YNDWTLELLEELKNEA----VRHFPRIWLHSLGQHIY 47 (51)
T ss_dssp TSHHHHHHHHHHHHHT----TTSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHHH
Confidence 4689999999885443 46799999999998764
No 13
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=44.45 E-value=13 Score=33.29 Aligned_cols=48 Identities=21% Similarity=0.368 Sum_probs=37.7
Q ss_pred cceEEEccccccchhhhHHHHHHHHhcC-ceeEEEeCCCc--hhHHHHHhh
Q 017671 95 RCKVFLGFTSNLISSGVRDTVRYLVQHH-MVDVVVTTAGG--IEEDLVKCL 142 (368)
Q Consensus 95 ~~tIfL~~tgnmvssGlr~~i~~Li~~~-~VD~IVtTgg~--lehDi~~~l 142 (368)
+.+|.|++||+.-.--.-++++.|.+.| -|++|+|-+|. +...-++.+
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l 58 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYF 58 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGGG
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHh
Confidence 3589999999998888889999999987 58999998875 333334444
No 14
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=44.40 E-value=20 Score=31.57 Aligned_cols=47 Identities=19% Similarity=0.304 Sum_probs=39.0
Q ss_pred ceEEEccccccchhhhHHHHHHHHhcC-ceeEEEeCCCc--hhHHHHHhh
Q 017671 96 CKVFLGFTSNLISSGVRDTVRYLVQHH-MVDVVVTTAGG--IEEDLVKCL 142 (368)
Q Consensus 96 ~tIfL~~tgnmvssGlr~~i~~Li~~~-~VD~IVtTgg~--lehDi~~~l 142 (368)
-+|.|++||+.-.--.-++++.|.++| -|++|+|.+|. +....++.+
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l 55 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQF 55 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHh
Confidence 589999999988888788999999987 58999999986 555556655
No 15
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=43.57 E-value=21 Score=32.21 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=33.1
Q ss_pred ccceEEEccccccchhhhHHHHHHHHh-cC-ceeEEEeCCCc
Q 017671 94 VRCKVFLGFTSNLISSGVRDTVRYLVQ-HH-MVDVVVTTAGG 133 (368)
Q Consensus 94 ~~~tIfL~~tgnmvssGlr~~i~~Li~-~~-~VD~IVtTgg~ 133 (368)
.+-+|.|++||+.-.--.-++++.|.+ .| -|++|+|-+|.
T Consensus 18 ~~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp SSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECTGGG
T ss_pred CCCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEECHhHH
Confidence 457899999999988888999999998 66 58999998875
No 16
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=43.33 E-value=12 Score=32.76 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=19.3
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.++++.-+|+||||||.
T Consensus 68 ~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 68 KILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp HHHHHHHHHHTCTTCCEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 467778888777568999999994
No 17
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=42.65 E-value=13 Score=32.49 Aligned_cols=24 Identities=21% Similarity=0.272 Sum_probs=18.4
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.+++..-.|+||||||.
T Consensus 55 ~I~~~l~~~~~~~~~DlVittGG~ 78 (178)
T 2pbq_A 55 LIEKTLIELADEKGCSLILTTGGT 78 (178)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 456777777775458999999994
No 18
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=41.50 E-value=13 Score=33.15 Aligned_cols=24 Identities=29% Similarity=0.331 Sum_probs=19.4
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.++++.-.|+||||||.
T Consensus 53 ~I~~al~~a~~~~~~DlVitTGGt 76 (195)
T 1di6_A 53 IIEQTLCELVDEMSCHLVLTTGGT 76 (195)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCC
Confidence 466778888876668999999995
No 19
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=41.00 E-value=14 Score=32.76 Aligned_cols=24 Identities=17% Similarity=0.386 Sum_probs=19.0
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.++++.-.|+||||||.
T Consensus 65 ~I~~al~~a~~~~~~DlVIttGGt 88 (189)
T 1jlj_A 65 EIKETLIDWCDEKELNLILTTGGT 88 (189)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHhhcCCCCEEEEcCCC
Confidence 466777777775568999999995
No 20
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=40.77 E-value=14 Score=31.73 Aligned_cols=23 Identities=22% Similarity=0.346 Sum_probs=17.9
Q ss_pred hHHHHHHHHhcCceeEEEeCCCc
Q 017671 111 VRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 111 lr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
+++.++.+...+-.|+|+||||.
T Consensus 69 i~~al~~~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 69 ILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp HHHHHHHHHTCTTCCEEEEESCC
T ss_pred HHHHHHHHHhcCCCCEEEecCCc
Confidence 45566666667789999999995
No 21
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=40.27 E-value=12 Score=32.92 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHhcCceeEEEeCCCc
Q 017671 109 SGVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 109 sGlr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
.-+++.|+.++++ .|+||||||.
T Consensus 50 ~~I~~~l~~a~~~--~DlVittGG~ 72 (172)
T 3kbq_A 50 DEIGWAFRVALEV--SDLVVSSGGL 72 (172)
T ss_dssp HHHHHHHHHHHHH--CSEEEEESCC
T ss_pred HHHHHHHHHHHhc--CCEEEEcCCC
Confidence 3466777777766 8999999994
No 22
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=40.19 E-value=23 Score=31.39 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=33.2
Q ss_pred eEEEccccccchhhhHHHHHHHHhcC-ceeEEEeCCCc
Q 017671 97 KVFLGFTSNLISSGVRDTVRYLVQHH-MVDVVVTTAGG 133 (368)
Q Consensus 97 tIfL~~tgnmvssGlr~~i~~Li~~~-~VD~IVtTgg~ 133 (368)
+|.|++||+.-.--.-++++.|.++| -|++|+|-+|.
T Consensus 4 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 4 KLLICATASINVININHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 69999999998888889999999977 59999999885
No 23
>1rhy_A IGPD, imidazole glycerol phosphate dehydratase; dehydratases, histidine biosynthesis, LEFT-handed B-A-B CROS motif, gene duplication; 2.30A {Filobasidiella neoformans} SCOP: d.14.1.9 d.14.1.9
Probab=39.72 E-value=26 Score=32.04 Aligned_cols=59 Identities=27% Similarity=0.457 Sum_probs=43.8
Q ss_pred cchhhhH---HHHHHHHhcCceeEEEeCCCchh-------HHHHHhhcCccccCCCCCchhH-HhCCCcceeeeeec
Q 017671 106 LISSGVR---DTVRYLVQHHMVDVVVTTAGGIE-------EDLVKCLAPTFKGDFALPGAYL-RSKGLNRIGNLLVP 171 (368)
Q Consensus 106 mvssGlr---~~i~~Li~~~~VD~IVtTgg~le-------hDi~~~l~~~y~G~~~~dd~~L-r~~ginRigdv~ip 171 (368)
=|+||+. .++..|.+|+.+|.-|..=|-++ ||+.=+||.-+. ..| -++||+|.|+-++|
T Consensus 35 ~i~TGigFlDHML~~la~Hg~~dL~v~a~GDl~iD~HHtvED~gI~LG~Al~-------~ALGdk~GI~RyG~a~vP 104 (202)
T 1rhy_A 35 NVSTGIGFLDHMFTALAKHGGMSLQLQCKGDLHIDDHHTAEDCALALGEAFK-------KALGERKGIKRYGYAYAP 104 (202)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCEEEEEEESCC------CCHHHHHHHHHHHH-------HHHTTCTTCCCEEEEEEE
T ss_pred eeeCCCcHHHHHHHHHHHHcCCceEEEEecCCccccCccHHHhhhhHHHHHH-------HHhcCccccceeeccccc
Confidence 4888887 58999999999999998877653 666666664321 111 24899999999988
No 24
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=39.01 E-value=19 Score=32.69 Aligned_cols=38 Identities=18% Similarity=0.135 Sum_probs=33.6
Q ss_pred ceEEEccccccchhhhHHHHHHHHhcC-ceeEEEeCCCc
Q 017671 96 CKVFLGFTSNLISSGVRDTVRYLVQHH-MVDVVVTTAGG 133 (368)
Q Consensus 96 ~tIfL~~tgnmvssGlr~~i~~Li~~~-~VD~IVtTgg~ 133 (368)
-+|.||+||+.-.--.-++++.|.++| -|++|+|-+|-
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A~ 43 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQ 43 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECccHH
Confidence 589999999988888889999999987 68999998874
No 25
>3bpq_A Antitoxin RELB3, RELB; protein toxin-antitoxin complex; 2.20A {Methanocaldococcus jannaschii}
Probab=36.72 E-value=27 Score=25.38 Aligned_cols=47 Identities=17% Similarity=0.300 Sum_probs=28.9
Q ss_pred cceeeeeecCccHHHHHHHHHHHHHHHHHhhcccCcccCHHHHHHHhc
Q 017671 163 NRIGNLLVPNDNYCKFEDWIIPIFDQMLKEQNEEEISWTPSKVIARLG 210 (368)
Q Consensus 163 nRigdv~ip~e~y~~~E~~i~~il~~l~~~q~~~~~~~t~~e~~~~lG 210 (368)
.||.-++||-+.|.++|++-..=|-++.++-+ +...+|..+-...||
T Consensus 5 ~~i~kvii~~~~fekieEiED~GL~kaM~Ev~-dee~L~~eeA~~~L~ 51 (52)
T 3bpq_A 5 KRFKKFFISRKEYEKIEEILDIGLAKAMEETK-DDELLTYDEIKELLG 51 (52)
T ss_dssp ---CCCEECHHHHHHHHHHHHHHHHHHHHTTT-TCCEECHHHHHC---
T ss_pred hhhHhheecHHHHHHHHHHHHHHHHHHHHHhc-CCccCCHHHHHHHhc
Confidence 48999999999999999994443333334432 345788888777776
No 26
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=33.99 E-value=23 Score=31.47 Aligned_cols=37 Identities=19% Similarity=0.089 Sum_probs=31.8
Q ss_pred eEEEccccccchhhhHHHHHHHHhcC-ceeEEEeCCCc
Q 017671 97 KVFLGFTSNLISSGVRDTVRYLVQHH-MVDVVVTTAGG 133 (368)
Q Consensus 97 tIfL~~tgnmvssGlr~~i~~Li~~~-~VD~IVtTgg~ 133 (368)
+|.|++||+.-.--.-++++.|.+.| -|++|+|-+|-
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 40 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAK 40 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEChhHH
Confidence 68999999987777788999999987 68999998874
No 27
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=31.37 E-value=26 Score=31.52 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=32.0
Q ss_pred eEEEccccccchhhhHHHHHHHHhc-C-ceeEEEeCCCc
Q 017671 97 KVFLGFTSNLISSGVRDTVRYLVQH-H-MVDVVVTTAGG 133 (368)
Q Consensus 97 tIfL~~tgnmvssGlr~~i~~Li~~-~-~VD~IVtTgg~ 133 (368)
+|.||+||+.-.--.-++++.|.+. | -|++|+|-+|-
T Consensus 2 ~IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~T~~A~ 40 (197)
T 1sbz_A 2 KLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAK 40 (197)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEECHHHH
T ss_pred EEEEEEeChHHHHHHHHHHHHHHhccCCEEEEEECchHH
Confidence 6899999998777888899999997 5 69999998874
No 28
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=30.66 E-value=68 Score=30.63 Aligned_cols=47 Identities=26% Similarity=0.327 Sum_probs=34.8
Q ss_pred cceEEEccccccchhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhcC
Q 017671 95 RCKVFLGFTSNLISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLAP 144 (368)
Q Consensus 95 ~~tIfL~~tgnmvssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~~ 144 (368)
.+....-+.+.++-.+++++|+.|-++| +++.|+||++ +++.+.++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~l~~~l~~~G-~~v~ivSas~--~~~v~~~a~ 178 (327)
T 4as2_A 132 DKLATLDVEPPRVFSGQRELYNKLMENG-IEVYVISAAH--EELVRMVAA 178 (327)
T ss_dssp TEEEEEEECCCEECHHHHHHHHHHHHTT-CEEEEEEEEE--HHHHHHHHT
T ss_pred cccccccccccccCHHHHHHHHHHHHCC-CEEEEEeCCc--HHHHHHHHh
Confidence 3444455667799999999999999999 5677777775 467776653
No 29
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=30.45 E-value=26 Score=31.08 Aligned_cols=23 Identities=30% Similarity=0.443 Sum_probs=16.6
Q ss_pred hhHHHHHHHHhcCceeEEEeCCCc
Q 017671 110 GVRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 110 Glr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
-+++.|+.++. .-+|+||||||.
T Consensus 77 ~I~~al~~a~~-~~~DlVIttGGt 99 (185)
T 3rfq_A 77 DIRNALNTAVI-GGVDLVVSVGGT 99 (185)
T ss_dssp HHHHHHHHHHH-TTCSEEEEESCC
T ss_pred HHHHHHHHHHh-CCCCEEEECCCC
Confidence 45666666663 348999999995
No 30
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=30.31 E-value=26 Score=30.20 Aligned_cols=22 Identities=32% Similarity=0.557 Sum_probs=16.7
Q ss_pred hHHHHHHHHhcCceeEEEeCCCc
Q 017671 111 VRDTVRYLVQHHMVDVVVTTAGG 133 (368)
Q Consensus 111 lr~~i~~Li~~~~VD~IVtTgg~ 133 (368)
+++.|+.+++ .-.|+||||||.
T Consensus 55 i~~al~~a~~-~~~DlVittGG~ 76 (164)
T 3pzy_A 55 VGEALRKAID-DDVDVILTSGGT 76 (164)
T ss_dssp HHHHHHHHHH-TTCSEEEEESCC
T ss_pred HHHHHHHHHh-CCCCEEEECCCC
Confidence 5666777765 348999999994
No 31
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=28.81 E-value=48 Score=32.37 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=27.0
Q ss_pred chhhhHHHHHHHHhcCceeEEEeCCCchhHHHHHhhc
Q 017671 107 ISSGVRDTVRYLVQHHMVDVVVTTAGGIEEDLVKCLA 143 (368)
Q Consensus 107 vssGlr~~i~~Li~~~~VD~IVtTgg~lehDi~~~l~ 143 (368)
+.-|++++|+.|-++| +++.|.|||.. ++++.++
T Consensus 222 ~~p~~~eLi~~L~~~G-~~v~IVSgg~~--~~v~~ia 255 (385)
T 4gxt_A 222 TLDEMVDLYRSLEENG-IDCYIVSASFI--DIVRAFA 255 (385)
T ss_dssp ECHHHHHHHHHHHHTT-CEEEEEEEEEH--HHHHHHH
T ss_pred eCHHHHHHHHHHHHCC-CeEEEEcCCcH--HHHHHHH
Confidence 6889999999999999 77888888863 5555554
No 32
>2ae8_A IGPD, imidazoleglycerol-phosphate dehydratase; beta-alpha-beta sandwich, duplication of A half-domain; 2.01A {Staphylococcus aureus subsp} SCOP: d.14.1.9 d.14.1.9
Probab=27.25 E-value=33 Score=31.76 Aligned_cols=75 Identities=19% Similarity=0.379 Sum_probs=49.7
Q ss_pred cccccceEEEccc---c-ccchhhhH---HHHHHHHhcCceeEEEeCCCch--h-----HHHHHhhcCccccCCCCCchh
Q 017671 91 RKSVRCKVFLGFT---S-NLISSGVR---DTVRYLVQHHMVDVVVTTAGGI--E-----EDLVKCLAPTFKGDFALPGAY 156 (368)
Q Consensus 91 ~~~~~~tIfL~~t---g-nmvssGlr---~~i~~Li~~~~VD~IVtTgg~l--e-----hDi~~~l~~~y~G~~~~dd~~ 156 (368)
|.-+++.|-+.+. | .=|+||+. .++..|.+++.+|.-|..-|-+ + ||+.=+||.-+. ..
T Consensus 36 R~T~ET~I~v~l~LD~G~~~i~TGigFlDHML~~la~Hg~~dL~v~a~GDl~iD~HHTvEDvgI~LGqAl~-------~A 108 (221)
T 2ae8_A 36 RNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLL-------EM 108 (221)
T ss_dssp C----CEEEEEEESSCCCCEEECSCHHHHHHHHHHHHHHCCEEEEEEECC----HHHHHHHHHHHHHHHHH-------HH
T ss_pred EeCCcEEEEEEEEeCCCcceecCCCcHHHHHHHHHHHHcCCceEEEEeeCCcccCCccHHHHHhHHHHHHH-------HH
Confidence 3334555655553 5 45889987 4899999999999999988764 3 666666664331 12
Q ss_pred H-HhCCCcceeeeeecC
Q 017671 157 L-RSKGLNRIGNLLVPN 172 (368)
Q Consensus 157 L-r~~ginRigdv~ip~ 172 (368)
| -++||+|.|+-++|-
T Consensus 109 LGdk~GI~RyG~a~vPM 125 (221)
T 2ae8_A 109 IKDKKHFVRYGTMYIPM 125 (221)
T ss_dssp HHHCCSBCCEEEEEEEE
T ss_pred hcCcccCceeecceecc
Confidence 2 358999999999883
No 33
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.19 E-value=1.5e+02 Score=26.29 Aligned_cols=85 Identities=18% Similarity=0.234 Sum_probs=55.2
Q ss_pred CCCHHH-HHHHH-hhcCcccccHHH---HHHHHHHHHhccccCCCCCcccccccCCccccccccceEEEccccccchhh-
Q 017671 37 GVNYSQ-LLKSM-VSTGFQASNFGD---AIEVVNQMLDWRLADEVIPEDCDERERDPEYRKSVRCKVFLGFTSNLISSG- 110 (368)
Q Consensus 37 ~~~~~~-L~~~~-~~~GFqA~~l~~---A~~i~~~M~~~~~~d~~~~~~~~~~~~~~~~~~~~~~tIfL~~tgnmvssG- 110 (368)
.+++.. ++..+ +..||.-.+||. .-++++...+.+. --|+|++++-|+++=
T Consensus 104 ~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~-----------------------d~v~l~~S~l~~~~~~ 160 (215)
T 3ezx_A 104 IHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKG-----------------------EKVLLVGSALMTTSML 160 (215)
T ss_dssp CCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTT-----------------------SCEEEEEECSSHHHHT
T ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCC-----------------------CEEEEEchhcccCcHH
Confidence 455544 34444 444999999986 3455565555221 235774466666554
Q ss_pred -hHHHHHHHHhcCc---eeEEEeCCCchhHHHHHhhcCc
Q 017671 111 -VRDTVRYLVQHHM---VDVVVTTAGGIEEDLVKCLAPT 145 (368)
Q Consensus 111 -lr~~i~~Li~~~~---VD~IVtTgg~lehDi~~~l~~~ 145 (368)
+++++..|-+.|. +-+ +.-|+.+.+|+.+.+|..
T Consensus 161 ~~~~~i~~l~~~~~~~~v~v-~vGG~~~~~~~a~~iGad 198 (215)
T 3ezx_A 161 GQKDLMDRLNEEKLRDSVKC-MFGGAPVSDKWIEEIGAD 198 (215)
T ss_dssp HHHHHHHHHHHTTCGGGSEE-EEESSSCCHHHHHHHTCC
T ss_pred HHHHHHHHHHHcCCCCCCEE-EEECCCCCHHHHHHhCCe
Confidence 8999999999986 443 445677999999988743
No 34
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9
Probab=24.91 E-value=41 Score=30.82 Aligned_cols=75 Identities=27% Similarity=0.444 Sum_probs=51.0
Q ss_pred cccccceEEEccc----c-ccchhhhH---HHHHHHHhcCceeEEEeCCCch--h-----HHHHHhhcCccccCCCCCch
Q 017671 91 RKSVRCKVFLGFT----S-NLISSGVR---DTVRYLVQHHMVDVVVTTAGGI--E-----EDLVKCLAPTFKGDFALPGA 155 (368)
Q Consensus 91 ~~~~~~tIfL~~t----g-nmvssGlr---~~i~~Li~~~~VD~IVtTgg~l--e-----hDi~~~l~~~y~G~~~~dd~ 155 (368)
|.-+++.|-+.+. | .=|.||+. .++..|.+|+.+|.-|..-|-+ + ||+.=+||.-+. .
T Consensus 17 R~T~ET~I~v~l~LDG~G~~~i~TGigFlDHML~~~a~Hg~~dL~v~a~GDl~iD~HHtvEDvgI~LG~Al~-------~ 89 (207)
T 2f1d_A 17 RVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALL-------K 89 (207)
T ss_dssp EECSSCEEEEEEETTCCCCEEEECSCHHHHHHHHHHHHHHTCEEEEEEECCTTTCSHHHHHHHHHHHHHHHH-------H
T ss_pred EcCCcEEEEEEEEeCCCCceeeeCCChHHHHHHHHHHHHcCCceEEEEecCccccCCCchhhhhhhHHHHHH-------H
Confidence 3345555555543 3 34889987 5899999999999998877764 3 666666664331 1
Q ss_pred hH-HhCCCcceeeeeecC
Q 017671 156 YL-RSKGLNRIGNLLVPN 172 (368)
Q Consensus 156 ~L-r~~ginRigdv~ip~ 172 (368)
.| -++||+|.|+-++|-
T Consensus 90 ALGdk~GI~RyG~a~vPM 107 (207)
T 2f1d_A 90 ALGERKGINRFGDFTAPL 107 (207)
T ss_dssp HHTTCCSBCCBCCEEEEE
T ss_pred HhcCccccceeEeeeecc
Confidence 11 247899999988883
No 35
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=22.62 E-value=84 Score=22.88 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=24.9
Q ss_pred CHHHHHHHHhhcCc------------ccccHHHHHHHHHHHHh
Q 017671 39 NYSQLLKSMVSTGF------------QASNFGDAIEVVNQMLD 69 (368)
Q Consensus 39 ~~~~L~~~~~~~GF------------qA~~l~~A~~i~~~M~~ 69 (368)
-+...|+++..||| ...++.+|++.+-++-+
T Consensus 8 ~~a~~L~~L~eMGF~D~~~N~~aL~~~~gnv~~aI~~Ll~~~~ 50 (54)
T 2cp8_A 8 QTAALMAHLFEMGFCDRQLNLRLLKKHNYNILQVVTELLQLSG 50 (54)
T ss_dssp THHHHHHHHHHHTCCCHHHHHHHHTTTTTCHHHHHHHHHHHSS
T ss_pred hhHHHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHHhccC
Confidence 46678999999999 66788888888877644
Done!