Query 017672
Match_columns 368
No_of_seqs 171 out of 2026
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 02:26:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017672.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017672hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 3.4E-38 7.3E-43 294.6 31.3 322 10-344 8-340 (358)
2 PRK11272 putative DMT superfam 100.0 8.6E-33 1.9E-37 254.0 29.1 283 12-335 5-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 4.1E-32 8.9E-37 250.3 29.3 279 17-335 6-290 (299)
4 PRK11689 aromatic amino acid e 100.0 1.2E-31 2.7E-36 246.5 25.3 285 13-335 2-290 (295)
5 PRK15430 putative chlorampheni 100.0 2.1E-31 4.6E-36 245.1 26.8 282 8-333 1-286 (296)
6 PRK10532 threonine and homoser 100.0 6.7E-31 1.4E-35 241.5 27.8 279 11-337 8-286 (293)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 1.1E-30 2.4E-35 236.4 25.3 258 27-327 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 3.6E-29 7.9E-34 231.2 26.2 281 21-337 8-298 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 1.2E-27 2.7E-32 218.6 27.3 275 16-329 2-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.2E-26 2.7E-31 212.3 28.6 300 12-338 10-311 (334)
11 PTZ00343 triose or hexose phos 100.0 2.8E-26 6E-31 215.3 26.9 284 13-333 47-349 (350)
12 TIGR00688 rarD rarD protein. T 100.0 4.7E-26 1E-30 205.5 24.6 248 15-307 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 1.8E-23 3.9E-28 191.8 28.5 284 11-333 3-288 (292)
14 COG2962 RarD Predicted permeas 99.9 2.5E-22 5.4E-27 175.3 23.4 282 11-336 3-287 (293)
15 KOG4510 Permease of the drug/m 99.9 2.4E-25 5.2E-30 190.0 2.6 293 12-335 35-328 (346)
16 COG5006 rhtA Threonine/homoser 99.9 1.8E-21 3.9E-26 165.4 22.8 274 15-335 12-285 (292)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.7E-21 5.9E-26 177.0 23.0 277 16-332 2-288 (290)
18 PF08449 UAA: UAA transporter 99.9 2.5E-19 5.3E-24 165.5 26.0 268 43-337 31-302 (303)
19 KOG2765 Predicted membrane pro 99.8 6.5E-18 1.4E-22 151.6 18.8 301 10-336 9-394 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.7 6.8E-18 1.5E-22 152.9 11.3 276 28-339 30-314 (316)
21 KOG1580 UDP-galactose transpor 99.7 2.1E-15 4.6E-20 127.1 19.0 259 44-333 53-314 (337)
22 KOG1443 Predicted integral mem 99.7 1.8E-14 3.9E-19 126.2 23.1 295 1-330 1-313 (349)
23 KOG2234 Predicted UDP-galactos 99.7 1.1E-13 2.4E-18 124.8 28.4 299 15-337 15-327 (345)
24 COG2510 Predicted membrane pro 99.7 9.9E-16 2.1E-20 117.0 10.3 135 15-157 3-138 (140)
25 KOG2766 Predicted membrane pro 99.6 3.1E-16 6.7E-21 133.7 5.0 284 12-332 15-299 (336)
26 KOG1581 UDP-galactose transpor 99.6 1.6E-14 3.6E-19 126.6 15.7 265 43-336 50-317 (327)
27 PF04142 Nuc_sug_transp: Nucle 99.6 2.9E-14 6.2E-19 126.6 17.5 229 75-322 13-243 (244)
28 KOG1444 Nucleotide-sugar trans 99.6 1.6E-12 3.5E-17 115.6 25.7 293 12-341 9-309 (314)
29 COG2510 Predicted membrane pro 99.6 4.3E-14 9.3E-19 108.1 13.4 136 193-331 3-138 (140)
30 PF00892 EamA: EamA-like trans 99.5 2.4E-14 5.2E-19 114.2 8.8 125 25-157 1-125 (126)
31 PF00892 EamA: EamA-like trans 99.4 3.5E-13 7.5E-18 107.5 8.3 125 203-331 1-125 (126)
32 KOG3912 Predicted integral mem 99.4 1E-11 2.2E-16 107.7 16.6 279 25-331 13-333 (372)
33 KOG1583 UDP-N-acetylglucosamin 99.4 5.8E-12 1.3E-16 109.1 13.0 263 45-331 34-313 (330)
34 KOG1442 GDP-fucose transporter 99.4 1E-12 2.2E-17 113.5 8.3 269 43-343 60-338 (347)
35 TIGR00950 2A78 Carboxylate/Ami 99.3 3.7E-11 8.1E-16 108.5 14.6 134 12-154 125-260 (260)
36 COG5070 VRG4 Nucleotide-sugar 99.3 2.7E-11 5.9E-16 101.7 10.9 277 30-338 21-302 (309)
37 PF06800 Sugar_transport: Suga 99.2 5.4E-09 1.2E-13 92.7 22.6 252 42-329 10-268 (269)
38 PF13536 EmrE: Multidrug resis 99.2 3.2E-11 6.9E-16 94.5 7.5 104 49-159 2-107 (113)
39 PRK10532 threonine and homoser 99.2 8.3E-10 1.8E-14 101.6 15.7 137 13-159 146-282 (293)
40 KOG1582 UDP-galactose transpor 99.2 8.4E-10 1.8E-14 95.5 14.0 261 41-336 70-336 (367)
41 PRK11272 putative DMT superfam 99.1 1.2E-09 2.7E-14 100.4 14.5 138 13-158 148-285 (292)
42 PRK15430 putative chlorampheni 99.1 6.1E-10 1.3E-14 102.6 12.3 138 190-331 5-144 (296)
43 PRK13499 rhamnose-proton sympo 99.1 6.1E-08 1.3E-12 89.5 24.7 297 12-334 4-343 (345)
44 PF03151 TPT: Triose-phosphate 99.1 1.5E-09 3.2E-14 89.9 11.6 138 194-332 1-153 (153)
45 PF05653 Mg_trans_NIPA: Magnes 99.1 1.4E-08 3.1E-13 92.9 19.0 278 12-335 4-295 (300)
46 TIGR00688 rarD rarD protein. T 99.1 1.7E-09 3.7E-14 97.5 11.8 136 193-331 2-141 (256)
47 TIGR03340 phn_DUF6 phosphonate 99.1 3.6E-09 7.8E-14 96.8 14.0 133 195-332 3-135 (281)
48 KOG4314 Predicted carbohydrate 99.0 8.6E-10 1.9E-14 91.1 7.9 210 91-332 64-276 (290)
49 PRK11689 aromatic amino acid e 99.0 4.4E-09 9.4E-14 96.9 13.6 134 13-158 154-287 (295)
50 PLN00411 nodulin MtN21 family 99.0 7.4E-09 1.6E-13 97.3 14.8 137 14-159 188-329 (358)
51 TIGR00803 nst UDP-galactose tr 99.0 8.8E-10 1.9E-14 97.2 6.5 215 107-329 5-221 (222)
52 PRK11453 O-acetylserine/cystei 98.9 2.5E-08 5.4E-13 92.1 15.3 139 14-158 142-287 (299)
53 PRK02971 4-amino-4-deoxy-L-ara 98.9 2.9E-08 6.3E-13 79.0 11.8 122 193-335 2-125 (129)
54 TIGR00817 tpt Tpt phosphate/ph 98.9 1.8E-08 3.8E-13 93.2 10.9 140 13-158 143-293 (302)
55 PF13536 EmrE: Multidrug resis 98.8 2.2E-08 4.7E-13 78.4 7.8 107 228-335 3-109 (113)
56 PF03151 TPT: Triose-phosphate 98.7 6.5E-07 1.4E-11 73.9 13.4 133 16-155 1-150 (153)
57 PTZ00343 triose or hexose phos 98.7 6.4E-07 1.4E-11 84.4 14.8 139 13-157 192-347 (350)
58 COG0697 RhaT Permeases of the 98.6 1.1E-06 2.5E-11 80.2 14.9 135 13-158 152-287 (292)
59 COG4975 GlcU Putative glucose 98.6 2.8E-08 6E-13 85.2 3.0 277 16-331 3-284 (288)
60 PRK15051 4-amino-4-deoxy-L-ara 98.6 9.2E-07 2E-11 68.7 11.2 70 82-157 39-108 (111)
61 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.3E-06 2.9E-11 80.1 13.1 130 13-158 150-288 (290)
62 COG2962 RarD Predicted permeas 98.5 7E-07 1.5E-11 79.0 10.2 143 190-335 4-147 (293)
63 COG5006 rhtA Threonine/homoser 98.5 1.3E-06 2.9E-11 75.3 10.9 138 12-158 145-282 (292)
64 PRK02971 4-amino-4-deoxy-L-ara 98.5 3.2E-06 7E-11 67.3 11.6 119 15-158 2-122 (129)
65 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.4E-06 2.9E-11 67.7 8.9 67 265-331 42-108 (111)
66 PF06027 DUF914: Eukaryotic pr 98.3 1.3E-05 2.7E-10 74.3 12.5 141 11-159 164-306 (334)
67 KOG2922 Uncharacterized conser 98.2 3.8E-06 8.3E-11 75.2 7.2 275 11-334 17-308 (335)
68 KOG4510 Permease of the drug/m 98.1 1.3E-06 2.9E-11 75.9 1.9 138 190-335 35-172 (346)
69 PRK10452 multidrug efflux syst 97.9 3E-05 6.5E-10 60.6 6.7 69 266-334 36-105 (120)
70 PF04657 DUF606: Protein of un 97.9 0.00014 3E-09 58.8 10.3 132 194-329 2-138 (138)
71 PF06800 Sugar_transport: Suga 97.9 0.00012 2.7E-09 65.2 10.9 135 10-154 133-267 (269)
72 PF08449 UAA: UAA transporter 97.9 0.00017 3.8E-09 66.6 11.9 128 204-337 11-141 (303)
73 PF05653 Mg_trans_NIPA: Magnes 97.7 9.9E-05 2.2E-09 67.8 7.6 121 189-333 3-123 (300)
74 PF10639 UPF0546: Uncharacteri 97.7 6.5E-05 1.4E-09 57.8 5.2 110 21-156 2-112 (113)
75 PF06379 RhaT: L-rhamnose-prot 97.7 0.014 3E-07 53.5 20.0 301 12-333 4-341 (344)
76 COG3238 Uncharacterized protei 97.6 0.00066 1.4E-08 54.9 10.2 139 192-333 4-147 (150)
77 PRK09541 emrE multidrug efflux 97.6 0.0002 4.4E-09 55.2 6.9 67 267-333 37-104 (110)
78 PRK10452 multidrug efflux syst 97.5 0.00026 5.6E-09 55.4 6.1 68 85-158 35-103 (120)
79 COG2076 EmrE Membrane transpor 97.5 0.00031 6.8E-09 53.1 5.9 65 87-157 37-102 (106)
80 PF04657 DUF606: Protein of un 97.5 0.002 4.4E-08 52.0 11.1 130 17-155 3-138 (138)
81 PRK09541 emrE multidrug efflux 97.4 0.00048 1E-08 53.1 6.6 67 86-158 36-103 (110)
82 KOG1441 Glucose-6-phosphate/ph 97.4 0.00051 1.1E-08 63.0 7.2 139 12-158 160-307 (316)
83 PRK10650 multidrug efflux syst 97.4 0.0021 4.7E-08 49.3 9.3 64 87-156 42-106 (109)
84 COG2076 EmrE Membrane transpor 97.3 0.00058 1.3E-08 51.6 5.9 65 269-333 39-104 (106)
85 PRK11431 multidrug efflux syst 97.3 0.00084 1.8E-08 51.3 6.1 65 267-331 36-101 (105)
86 PRK11431 multidrug efflux syst 97.2 0.0011 2.5E-08 50.6 6.6 65 87-157 36-101 (105)
87 PRK13499 rhamnose-proton sympo 97.2 0.015 3.3E-07 54.1 14.4 147 10-158 169-341 (345)
88 PRK10650 multidrug efflux syst 97.2 0.0014 3E-08 50.4 6.3 63 269-331 44-107 (109)
89 PF04142 Nuc_sug_transp: Nucle 97.0 0.0016 3.5E-08 58.0 6.7 79 258-337 16-94 (244)
90 PF07857 DUF1632: CEO family ( 96.9 0.011 2.4E-07 52.5 10.8 192 16-218 1-208 (254)
91 PF10639 UPF0546: Uncharacteri 96.8 0.01 2.3E-07 45.7 8.5 108 200-329 3-111 (113)
92 PF00893 Multi_Drug_Res: Small 96.8 0.0021 4.7E-08 48.1 4.6 56 268-323 37-93 (93)
93 PF00893 Multi_Drug_Res: Small 96.7 0.0029 6.2E-08 47.4 4.9 57 87-149 36-93 (93)
94 KOG2765 Predicted membrane pro 96.7 0.012 2.6E-07 54.2 9.6 142 11-158 243-390 (416)
95 PF07857 DUF1632: CEO family ( 96.5 0.0032 7E-08 56.0 4.4 132 194-337 1-139 (254)
96 KOG2234 Predicted UDP-galactos 96.3 0.16 3.6E-06 46.8 14.2 142 193-335 15-167 (345)
97 COG4975 GlcU Putative glucose 96.3 0.0018 3.8E-08 56.2 1.5 132 194-335 3-139 (288)
98 KOG1581 UDP-galactose transpor 96.0 0.082 1.8E-06 47.6 10.5 140 12-159 169-314 (327)
99 TIGR00803 nst UDP-galactose tr 95.5 0.044 9.5E-07 48.1 6.9 59 91-155 163-221 (222)
100 KOG2922 Uncharacterized conser 95.4 0.0063 1.4E-07 55.0 1.2 127 187-337 15-141 (335)
101 COG3238 Uncharacterized protei 95.4 0.3 6.5E-06 39.7 10.6 140 13-156 3-144 (150)
102 KOG1444 Nucleotide-sugar trans 94.7 0.47 1E-05 43.2 10.9 134 192-331 11-148 (314)
103 KOG4314 Predicted carbohydrate 94.0 0.023 5E-07 47.7 1.0 63 273-335 66-128 (290)
104 COG5070 VRG4 Nucleotide-sugar 93.9 0.31 6.8E-06 41.9 7.6 137 16-159 156-297 (309)
105 KOG4831 Unnamed protein [Funct 93.0 1.5 3.3E-05 32.9 9.1 111 19-157 7-124 (125)
106 PF06379 RhaT: L-rhamnose-prot 92.9 0.93 2E-05 41.9 9.5 146 190-339 4-160 (344)
107 KOG1580 UDP-galactose transpor 92.6 1.8 3.9E-05 37.8 10.3 137 9-158 166-313 (337)
108 KOG1442 GDP-fucose transporter 92.0 0.43 9.3E-06 42.5 5.9 143 12-161 182-330 (347)
109 KOG1443 Predicted integral mem 90.1 2.7 5.8E-05 38.2 9.2 122 212-334 35-158 (349)
110 KOG1583 UDP-N-acetylglucosamin 87.0 6.7 0.00014 35.3 9.5 141 8-158 157-314 (330)
111 PF07168 Ureide_permease: Urei 85.7 1.5 3.2E-05 39.8 4.9 130 199-331 2-145 (336)
112 PRK02237 hypothetical protein; 83.6 3.9 8.4E-05 31.0 5.6 46 290-335 63-108 (109)
113 PF06609 TRI12: Fungal trichot 81.8 64 0.0014 32.9 17.3 22 137-158 378-399 (599)
114 KOG3912 Predicted integral mem 81.7 1.7 3.7E-05 39.0 3.5 64 269-332 95-158 (372)
115 PRK06638 NADH:ubiquinone oxido 81.1 35 0.00075 29.3 13.4 32 301-332 133-166 (198)
116 KOG1582 UDP-galactose transpor 78.6 8.7 0.00019 34.4 6.9 141 13-160 188-334 (367)
117 PF02694 UPF0060: Uncharacteri 77.3 3.6 7.9E-05 31.1 3.6 44 292-335 63-106 (107)
118 PF04342 DUF486: Protein of un 77.1 2.4 5.2E-05 32.0 2.6 30 301-330 77-106 (108)
119 COG3169 Uncharacterized protei 74.4 7.3 0.00016 28.9 4.4 34 299-332 82-115 (116)
120 KOG2766 Predicted membrane pro 73.4 4.4 9.6E-05 35.9 3.7 137 11-157 162-298 (336)
121 PF04342 DUF486: Protein of un 72.2 22 0.00047 26.9 6.6 29 121-155 77-105 (108)
122 KOG4831 Unnamed protein [Funct 70.9 15 0.00033 27.8 5.5 60 272-331 64-124 (125)
123 PF06570 DUF1129: Protein of u 67.1 83 0.0018 27.1 10.7 48 77-128 144-191 (206)
124 PF08507 COPI_assoc: COPI asso 67.0 14 0.0003 29.6 5.1 15 316-330 89-103 (136)
125 COG4657 RnfA Predicted NADH:ub 65.3 77 0.0017 26.1 9.3 53 189-241 128-185 (193)
126 PF05297 Herpes_LMP1: Herpesvi 64.6 2.2 4.7E-05 38.2 0.0 48 104-156 47-95 (381)
127 COG4858 Uncharacterized membra 64.4 57 0.0012 27.5 8.1 118 16-140 101-218 (226)
128 PF15102 TMEM154: TMEM154 prot 61.2 8.8 0.00019 30.9 2.9 25 317-341 66-90 (146)
129 COG1742 Uncharacterized conser 58.5 20 0.00043 27.1 4.1 45 290-334 62-106 (109)
130 PRK02237 hypothetical protein; 56.1 14 0.0003 28.2 3.0 38 115-158 68-105 (109)
131 PF02694 UPF0060: Uncharacteri 52.6 13 0.00029 28.2 2.4 38 115-158 66-103 (107)
132 PF15471 TMEM171: Transmembran 49.9 19 0.00041 32.1 3.3 24 314-337 161-184 (319)
133 PF01102 Glycophorin_A: Glycop 47.6 11 0.00024 29.6 1.4 14 318-331 75-88 (122)
134 PF11044 TMEMspv1-c74-12: Plec 47.2 16 0.00035 22.7 1.8 17 312-328 2-18 (49)
135 PF05297 Herpes_LMP1: Herpesvi 45.8 5.5 0.00012 35.7 -0.6 23 271-293 119-141 (381)
136 TIGR01647 ATPase-IIIA_H plasma 43.9 4.2E+02 0.009 28.0 12.8 114 42-156 625-752 (755)
137 PF07168 Ureide_permease: Urei 43.7 18 0.00039 33.1 2.3 129 20-155 1-143 (336)
138 TIGR00892 2A0113 monocarboxyla 43.3 3.2E+02 0.0069 26.5 12.1 20 337-356 431-450 (455)
139 PF03547 Mem_trans: Membrane t 41.4 3.1E+02 0.0067 25.8 13.3 18 259-276 62-79 (385)
140 COG3086 RseC Positive regulato 37.1 20 0.00043 28.9 1.4 23 285-307 73-95 (150)
141 MTH00057 ND6 NADH dehydrogenas 36.5 2.6E+02 0.0057 23.6 10.5 31 301-331 132-164 (186)
142 PF10754 DUF2569: Protein of u 34.9 1.7E+02 0.0036 23.8 6.6 30 188-217 116-145 (149)
143 TIGR00836 amt ammonium transpo 34.7 4.3E+02 0.0093 25.5 18.7 56 101-157 152-207 (403)
144 KOG1330 Sugar transporter/spin 34.5 2.8E+02 0.0061 27.4 8.9 56 188-243 283-340 (493)
145 PF09656 PGPGW: Putative trans 31.0 1.6E+02 0.0034 19.4 4.6 45 142-218 5-49 (53)
146 PRK13108 prolipoprotein diacyl 30.2 2E+02 0.0043 28.3 7.2 23 312-334 254-276 (460)
147 COG5336 Uncharacterized protei 30.2 1.8E+02 0.0039 22.3 5.3 10 298-307 57-66 (116)
148 COG3715 ManY Phosphotransferas 29.0 4.3E+02 0.0094 23.8 9.1 15 144-158 98-112 (265)
149 PF03616 Glt_symporter: Sodium 28.7 2E+02 0.0044 27.3 7.0 21 122-142 16-36 (368)
150 PF05961 Chordopox_A13L: Chord 28.3 45 0.00097 23.0 1.7 19 317-335 7-25 (68)
151 PF06946 Phage_holin_5: Phage 27.7 2.6E+02 0.0056 20.8 6.2 59 277-335 21-83 (93)
152 PF12606 RELT: Tumour necrosis 27.0 85 0.0018 20.4 2.8 7 325-331 16-22 (50)
153 PF07214 DUF1418: Protein of u 26.3 1.4E+02 0.0031 22.2 4.2 17 317-333 50-66 (96)
154 PF15099 PIRT: Phosphoinositid 25.4 77 0.0017 24.9 2.8 16 261-276 58-73 (129)
155 TIGR02865 spore_II_E stage II 25.1 8.4E+02 0.018 25.9 16.6 45 106-156 10-54 (764)
156 PF11381 DUF3185: Protein of u 25.1 73 0.0016 21.5 2.3 17 142-158 1-17 (59)
157 PF12292 DUF3624: Protein of u 25.0 1.4E+02 0.0031 21.2 3.8 44 19-63 25-68 (77)
158 PF04246 RseC_MucC: Positive r 24.9 39 0.00084 26.9 1.2 19 289-307 70-88 (135)
159 PF06123 CreD: Inner membrane 24.9 6.6E+02 0.014 24.5 12.6 27 193-219 351-377 (430)
160 PF15345 TMEM51: Transmembrane 24.5 48 0.001 29.0 1.7 22 318-339 67-88 (233)
161 TIGR02230 ATPase_gene1 F0F1-AT 24.4 2.6E+02 0.0057 21.1 5.4 36 116-157 54-89 (100)
162 KOG1623 Multitransmembrane pro 24.4 5.1E+02 0.011 23.1 10.0 46 285-330 154-204 (243)
163 PF08693 SKG6: Transmembrane a 23.9 62 0.0014 19.9 1.6 18 318-335 21-38 (40)
164 COG2917 Intracellular septatio 23.6 2.3E+02 0.005 23.7 5.3 85 98-213 14-98 (180)
165 COG2246 Predicted membrane pro 23.5 2.4E+02 0.0052 22.6 5.5 59 75-137 9-69 (139)
166 PF06781 UPF0233: Uncharacteri 23.0 1.6E+02 0.0036 21.5 4.0 58 255-332 28-85 (87)
167 TIGR02005 PTS-IIBC-alpha PTS s 22.8 5.5E+02 0.012 25.8 8.9 27 260-286 385-411 (524)
168 PF01102 Glycophorin_A: Glycop 22.8 61 0.0013 25.4 1.9 24 317-340 70-94 (122)
169 TIGR01943 rnfA electron transp 22.8 4.8E+02 0.01 22.2 12.2 38 122-159 147-184 (190)
170 COG1742 Uncharacterized conser 22.4 52 0.0011 24.9 1.3 38 115-158 67-104 (109)
171 TIGR01167 LPXTG_anchor LPXTG-m 22.4 93 0.002 17.7 2.2 15 313-327 11-25 (34)
172 COG4736 CcoQ Cbb3-type cytochr 22.3 1.1E+02 0.0024 20.7 2.8 20 319-338 17-36 (60)
173 PF07444 Ycf66_N: Ycf66 protei 22.0 73 0.0016 23.2 2.0 25 311-335 4-28 (84)
174 KOG1623 Multitransmembrane pro 21.9 5.7E+02 0.012 22.8 10.4 47 187-234 122-168 (243)
175 PF08802 CytB6-F_Fe-S: Cytochr 20.5 1.7E+02 0.0036 17.9 3.0 35 72-106 4-38 (39)
176 PRK10110 bifunctional PTS syst 20.4 4.6E+02 0.01 26.4 7.9 30 257-286 395-424 (530)
177 PRK05151 electron transport co 20.4 5.5E+02 0.012 22.0 11.6 38 122-159 148-185 (193)
178 PF01925 TauE: Sulfite exporte 20.2 5.7E+02 0.012 22.0 9.5 32 104-135 31-64 (240)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=294.55 Aligned_cols=322 Identities=30% Similarity=0.566 Sum_probs=253.7
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCHHHHHHHHHHHHH
Q 017672 10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLES-QNASPLSYSSVCKIFLVSLF 88 (368)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 88 (368)
+.|..++++.+++..+..+...++.|.+.+.|++|..+.++|+.++.++++++.+.+++ +.+++.+++++.++.+.|++
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 34678899999999999999999999999999999999999999999999998876554 33344457888899999998
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHH------hcccccccccccccchhhHHHhHHhHHHHhhhcCC
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLL------RIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGP 162 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~------~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~ 162 (368)
+ ..++.+++.|++|+++++++++.++.|+++.++++++ +|||++++ +++|++++++|+.++...+++
T Consensus 88 g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~ 160 (358)
T PLN00411 88 G-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGP 160 (358)
T ss_pred H-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCc
Confidence 8 5677799999999999999999999999999999999 47777777 999999999999998764332
Q ss_pred CCCCCC---CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHH
Q 017672 163 PLRFLN---WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF 239 (368)
Q Consensus 163 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (368)
.....+ ..+.+++ .........+...|++++++++++||+|.+.+|+..++++++...++++..++.+...+
T Consensus 161 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 235 (358)
T PLN00411 161 RVFVASSPPYLNFRQL-----SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSM 235 (358)
T ss_pred cccccccccccccccc-----ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHH
Confidence 110000 0000000 00000122344679999999999999999999999999877556677777777777666
Q ss_pred HHHHhhcC-CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHh
Q 017672 240 WAVAAERN-PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVG 318 (368)
Q Consensus 240 ~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~ 318 (368)
.....++. ...|....+.....+++.+++ +.++|.+|++++++.+|+++++..+++|+++++++++++||++++.+++
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~i 314 (358)
T PLN00411 236 IGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLI 314 (358)
T ss_pred HHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 66555432 233332233345567777775 5689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccchhcccc
Q 017672 319 GAVLLVGGLYSVLWGKNREERINKIV 344 (368)
Q Consensus 319 G~~lii~gi~~~~~~~~~~~~~~~~~ 344 (368)
|+++|+.|+++..+.+++|.+++.+.
T Consensus 315 G~~LIl~Gv~l~~~~~~~~~~~~~~~ 340 (358)
T PLN00411 315 GGILITLGFYAVMWGKANEEKDQLLS 340 (358)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhcccC
Confidence 99999999999998776665544444
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=253.95 Aligned_cols=283 Identities=14% Similarity=0.124 Sum_probs=234.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT 91 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (368)
+-..-++..++..++||.++++.|...++ ++|.+++++|+.+++++++++...++++ . .+++++......|.++..
T Consensus 5 ~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~--~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 5 QLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGHP-L--PTLRQWLNAALIGLLLLA 80 (292)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCCC-C--CcHHHHHHHHHHHHHHHH
Confidence 34445677788899999999999999886 9999999999999999998887654322 2 246778888888888777
Q ss_pred HHHHHHHHhc-cccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 92 LSLNLYYVAI-NYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 92 ~~~~~~~~al-~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
.++.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++ +++|++++++|+.++... ++
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~~-~~-------- 144 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNSG-GN-------- 144 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhcC-cc--------
Confidence 7788889999 9999999999999999999999986 69999999 999999999999988531 10
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA 250 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (368)
. +....|++++++++++||.|.+..|+..++ ++ ...+.+++..+.+...+.....+.+..
T Consensus 145 ----------------~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (292)
T PRK11272 145 ----------------L-SGNPWGAILILIASASWAFGSVWSSRLPLP-VG-MMAGAAEMLAAGVVLLIASLLSGERLT- 204 (292)
T ss_pred ----------------c-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-hHHHHHHHHHHHHHHHHHHHHcCCccc-
Confidence 1 123579999999999999999999997543 33 556778888888877776644332211
Q ss_pred ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
...+...|..+++.+++++++++.+|++++++.++++++.+.+++|+++++++++++||++++.+++|+++++.|+++.
T Consensus 205 -~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 205 -ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 1123467889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcccc
Q 017672 331 LWGKN 335 (368)
Q Consensus 331 ~~~~~ 335 (368)
.+.++
T Consensus 284 ~~~~~ 288 (292)
T PRK11272 284 TLGKY 288 (292)
T ss_pred HHHHh
Confidence 76444
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=250.30 Aligned_cols=279 Identities=16% Similarity=0.168 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 017672 17 YIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNL 96 (368)
Q Consensus 17 ~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (368)
.+++++++++||.++++.|...++ ++|..+.++|+.++++.++++.. +++. +++ .....|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~~~~---~~~---~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---RPKV---PLN---LLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---CCCC---chH---HHHHHHHHHHHHHHHH
Confidence 467889999999999999999986 99999999999998776665432 1111 122 3344455444556667
Q ss_pred HHHhccc-cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhh
Q 017672 97 YYVAINY-TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQK 175 (368)
Q Consensus 97 ~~~al~~-~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 175 (368)
++.+++| .+++.++++.++.|+++.+++++++|||++++ ++++++++++|+.++... +.+
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~~-~~~------------ 136 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIED-SLN------------ 136 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhccc-cCC------------
Confidence 7889988 58899999999999999999999999999999 999999999999998741 100
Q ss_pred cccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc--hhHHHHHHHHHHHHHHHHHHhhcCC---Cc
Q 017672 176 QVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKV--RLTTLQCFFSCIQSAFWAVAAERNP---SA 250 (368)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 250 (368)
.......|+++++.++++|++|.+.+|+..++.+++. ....+....+.+.........+++. ..
T Consensus 137 -----------~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (299)
T PRK11453 137 -----------GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHS 205 (299)
T ss_pred -----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhh
Confidence 1122347999999999999999999999866544322 2333444444333333332333221 11
Q ss_pred ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
+...+...|..+++.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++.
T Consensus 206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN 285 (299)
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence 12223457889999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcccc
Q 017672 331 LWGKN 335 (368)
Q Consensus 331 ~~~~~ 335 (368)
.+.++
T Consensus 286 ~~~~~ 290 (299)
T PRK11453 286 VFGLR 290 (299)
T ss_pred hcchh
Confidence 77664
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=1.2e-31 Score=246.53 Aligned_cols=285 Identities=12% Similarity=0.071 Sum_probs=214.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
+.+++++++++.++||.+++..|.+.++ ++|..+.++|+.++.++++++.. +++.+ +..++..+.+.+....
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~~----~~~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRLR----QFPKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---ccccc----cccHHHHHHHhHHHHH
Confidence 4577889999999999999999999997 99999999999999998887531 11111 1122334455566677
Q ss_pred HHHHHHHhccc----cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672 93 SLNLYYVAINY----TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN 168 (368)
Q Consensus 93 ~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~ 168 (368)
++.+++.++++ +++++++++.++.|+++.+++++++|||++++ +++|++++++|+.++... ++....
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~~-~~~~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLGG-DNGLSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheecC-Cccchh--
Confidence 77777777754 57788899999999999999999999999999 999999999999998742 110000
Q ss_pred CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC
Q 017672 169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP 248 (368)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (368)
+...........|++++++++++||.|.+..||..++.++ .... ...+.+.+.+.... +++.
T Consensus 145 -------------~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~-~~~~---~~~~~~~l~~~~~~-~~~~ 206 (295)
T PRK11689 145 -------------AELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKNG-ITLF---FILTALALWIKYFL-SPQP 206 (295)
T ss_pred -------------hhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCCc-hhHH---HHHHHHHHHHHHHH-hcCc
Confidence 0000011123469999999999999999999998766543 4432 22233333332222 2221
Q ss_pred CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHH
Q 017672 249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLY 328 (368)
Q Consensus 249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~ 328 (368)
.. ..+...|..+++.+ ++++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus 207 -~~-~~~~~~~~~l~~~~-~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~ 283 (295)
T PRK11689 207 -AM-VFSLPAIIKLLLAA-AAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSL 283 (295)
T ss_pred -cc-cCCHHHHHHHHHHH-HHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHH
Confidence 11 12234577777777 4789999999999999999999999999999999999999999999999999999999988
Q ss_pred Hhhcccc
Q 017672 329 SVLWGKN 335 (368)
Q Consensus 329 ~~~~~~~ 335 (368)
+..+.++
T Consensus 284 ~~~~~~~ 290 (295)
T PRK11689 284 LCWLATR 290 (295)
T ss_pred HHhhhHh
Confidence 8765443
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=2.1e-31 Score=245.13 Aligned_cols=282 Identities=10% Similarity=0.042 Sum_probs=210.2
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCC--CC-CCHHHHHHHHH
Q 017672 8 NAFTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNA--SP-LSYSSVCKIFL 84 (368)
Q Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~--~~-~~~~~~~~~~~ 84 (368)
|+++++.+|++++++++++||.++++.|.. ++ ++|.++.++|++++.+++.++...++++.. ++ .+++.+. ...
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 77 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLA 77 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHH
Confidence 567788999999999999999999999975 54 999999999999999888776644322100 00 1233332 344
Q ss_pred HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672 85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPL 164 (368)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~ 164 (368)
.+.++...++.++++|++++++++++++.++.|+++.+++++++|||++++ +++|++++++|+.++...++
T Consensus 78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~--- 148 (296)
T PRK15430 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG--- 148 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC---
Confidence 667777888999999999999999999999999999999999999999999 99999999999999864211
Q ss_pred CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHH
Q 017672 165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVA 243 (368)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (368)
+ . ..++++++++||.|.+..|+..++... ....+.+....+.....+.
T Consensus 149 ----------------------~-~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 197 (296)
T PRK15430 149 ----------------------S-L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI--- 197 (296)
T ss_pred ----------------------C-c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---
Confidence 1 1 146788999999999999886432111 1122233333333222111
Q ss_pred hhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672 244 AERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL 323 (368)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li 323 (368)
.+.....+...+...+..+++.++ .+.++|.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI 276 (296)
T PRK15430 198 ADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI 276 (296)
T ss_pred ccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 111111111111112233333444 6779999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 017672 324 VGGLYSVLWG 333 (368)
Q Consensus 324 i~gi~~~~~~ 333 (368)
+.|+.+....
T Consensus 277 ~~~~~v~~~~ 286 (296)
T PRK15430 277 WVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHH
Confidence 9887766543
No 6
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=6.7e-31 Score=241.46 Aligned_cols=279 Identities=11% Similarity=0.082 Sum_probs=221.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (368)
.++.+++.+++++.++|+.++.+.|.+.++ ++|..+.++|++++.++++++...++ + +.+++++...+..|.+.
T Consensus 8 ~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~-~---~~~~~~~~~~~~~g~~~- 81 (293)
T PRK10532 8 LPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR-L---RFAKEQRLPLLFYGVSL- 81 (293)
T ss_pred cccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh-c---cCCHHHHHHHHHHHHHH-
Confidence 456789999999999999999999999997 99999999999999998887653221 1 22467777777888764
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
...+.+++++++|+|++.++++.++.|+++.+++. ||.. +..++.++++|+.++... +.+
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~~-~~~------- 141 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLPL-GQD------- 141 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeeec-CCC-------
Confidence 66677899999999999999999999999988763 4432 345567889999887531 110
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA 250 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (368)
..+....|++++++++++||+|.+..|+..++.++ ... .+....+.+...+.....+.. .
T Consensus 142 ----------------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~~~~-~- 201 (293)
T PRK10532 142 ----------------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHGP-ATV-AIGSLIAALIFVPIGALQAGE-A- 201 (293)
T ss_pred ----------------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hHH-HHHHHHHHHHHHHHHHHccCc-c-
Confidence 11223579999999999999999999998777654 554 455566666666655433221 1
Q ss_pred ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
..+...|..++++|+++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus 202 --~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 202 --LWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred --cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 112234556789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcccccc
Q 017672 331 LWGKNRE 337 (368)
Q Consensus 331 ~~~~~~~ 337 (368)
.+..+++
T Consensus 280 ~~~~~~~ 286 (293)
T PRK10532 280 TLTIRRE 286 (293)
T ss_pred HhcCCCC
Confidence 7665443
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.98 E-value=1.1e-30 Score=236.40 Aligned_cols=258 Identities=17% Similarity=0.244 Sum_probs=219.6
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCh
Q 017672 27 YAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTA 106 (368)
Q Consensus 27 ~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 106 (368)
||.+++..|...+++.++....+.|++.+.+++.++...+ .+++++.+....|.++..+++.+++.|++|+++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999887668999999999999988887765432 235677788889989889999999999999999
Q ss_pred hhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCC
Q 017672 107 TFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDC 186 (368)
Q Consensus 107 ~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (368)
++++++.++.|+++.+++.+++|||++++ +++|+.++++|++++.. ++
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~------------------------- 121 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG------------------------- 121 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-------------------------
Confidence 99999999999999999999999999999 99999999999999863 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHH
Q 017672 187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYC 265 (368)
Q Consensus 187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 265 (368)
..+....|++++++++++|+.+.+..|+..++.++ +.....+++..+.+...+.....+++. . .+...|..+++.
T Consensus 122 ~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~ 197 (260)
T TIGR00950 122 NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYL 197 (260)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHH
Confidence 11234689999999999999999999998877653 234555677888877777665433221 1 134567788999
Q ss_pred HHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672 266 GLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL 327 (368)
Q Consensus 266 gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi 327 (368)
+++++++++.++++++++.++.+++.+.+++|+++++++++++||++++.+++|+++++.|+
T Consensus 198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=3.6e-29 Score=231.23 Aligned_cols=281 Identities=11% Similarity=0.059 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017672 21 IFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVA 100 (368)
Q Consensus 21 ~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (368)
++-.++-....+..|++.++-..|..+++.|+.++.+.+.+... ...+++++.+++++.+++..|++. +.++.+.+.|
T Consensus 8 ~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~ 85 (302)
T TIGR00817 8 GLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVS 85 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 33344444455788999885366999999999998877665521 122234456788999999999995 7888899999
Q ss_pred ccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCC
Q 017672 101 INYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSES 180 (368)
Q Consensus 101 l~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
++|++++.++++.++.|+++++++++++|||++++ +++|++++++|+.+... +
T Consensus 86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~~--~------------------- 138 (302)
T TIGR00817 86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALASD--T------------------- 138 (302)
T ss_pred HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhcC--C-------------------
Confidence 99999999999999999999999999999999999 99999999999987531 1
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--hCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC---cccc--
Q 017672 181 SPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIK--QYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS---AWKL-- 253 (368)
Q Consensus 181 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 253 (368)
+.+....|++++++++++|++|.+..||..+ ++++ ...+.+++..+.+.++|.....++... ++..
T Consensus 139 ------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~ 211 (302)
T TIGR00817 139 ------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDK-TNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAI 211 (302)
T ss_pred ------cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc-ccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhh
Confidence 1122357999999999999999999999887 5654 899999999999998888765543211 0000
Q ss_pred ---cchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 254 ---GWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 254 ---~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
.....+...++.+..+....+.++++++++.+|++.++...++|+++++++++++||++++.+++|+++++.|++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~ 291 (302)
T TIGR00817 212 SGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291 (302)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHH
Confidence 00011111222233233333356668999999999999999999999999999999999999999999999999999
Q ss_pred hcccccc
Q 017672 331 LWGKNRE 337 (368)
Q Consensus 331 ~~~~~~~ 337 (368)
.+.|.+|
T Consensus 292 ~~~k~~~ 298 (302)
T TIGR00817 292 SRVKAQK 298 (302)
T ss_pred HHHhccC
Confidence 8655433
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=1.2e-27 Score=218.63 Aligned_cols=275 Identities=14% Similarity=0.157 Sum_probs=205.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhh-ccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLE-SQNASPLSYSSVCKIFLVSLFGLTLSL 94 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (368)
.+++.++++++|+..++..|...++ -++ ..+++.....+++.++...+. ++.++..+ ++++.....+.++...++
T Consensus 2 ~~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 2 ALTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 3578899999999999999966554 344 347777777778877765432 22233323 444445555666668888
Q ss_pred HHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672 95 NLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ 174 (368)
Q Consensus 95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 174 (368)
.+++.|+++++++.++++.++.|+++.+++++++|||++++ +++|+.+++.|+.++... +.
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~~-~~------------ 138 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGLS-RF------------ 138 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhcc-cc------------
Confidence 89999999999999999999999999999999999999999 999999999999988641 11
Q ss_pred hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-HHHHHHh--hcCCCcc
Q 017672 175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS-AFWAVAA--ERNPSAW 251 (368)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~ 251 (368)
. .....|+.++++++++|++|.+..|+..++.++ ..........+.+.. .+..... .+.. ..
T Consensus 139 ------------~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 203 (281)
T TIGR03340 139 ------------A-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPA-FYSALGYLGIGFLAMGWPFLLLYLKRHGR-SM 203 (281)
T ss_pred ------------c-ccchhHHHHHHHHHHHHHHhhhhccccccchhc-ccccHHHHHHHHHHHHHHHHHHHHHHhcc-ch
Confidence 1 122368889999999999999998886544433 221111122222221 2222111 1111 11
Q ss_pred cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672 252 KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS 329 (368)
Q Consensus 252 ~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~ 329 (368)
. .....+..+++.+.+++.++|.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+++
T Consensus 204 ~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 204 F-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 1 1223456677888889999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.2e-26 Score=212.33 Aligned_cols=300 Identities=16% Similarity=0.215 Sum_probs=234.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLES-QNASPLSYSSVCKIFLVSLFG 89 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 89 (368)
+-.+..++-=+.+++-..+...+..+.+.|.+ |....++.++.-.++..+....++. +++.+..+++|+++++++++-
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D 89 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD 89 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence 44556666666677788888888888777776 8888888888777777766554433 223333457788888899887
Q ss_pred HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672 90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW 169 (368)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~ 169 (368)
.. ++.+.+.|++||+.+.++++..+..+++.+++++++|||.++. |++|+++++.|+.++...+...
T Consensus 90 v~-aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~------ 156 (334)
T PF06027_consen 90 VE-ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLS------ 156 (334)
T ss_pred HH-HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccc------
Confidence 54 4559999999999999999999999999999999999999999 9999999999999987633211
Q ss_pred ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC
Q 017672 170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS 249 (368)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (368)
++++.+..+..+|+++++.++++||++++++++..++.+. ........+++.++..+.....|.+.-
T Consensus 157 ------------~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~-~~~lg~~Glfg~ii~~iq~~ile~~~i 223 (334)
T PF06027_consen 157 ------------GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPR-VEFLGMLGLFGFIISGIQLAILERSGI 223 (334)
T ss_pred ------------cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHHHHHHHHHHHHheehhhh
Confidence 1111244566899999999999999999999999999764 777888888888888877766665421
Q ss_pred cccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672 250 AWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS 329 (368)
Q Consensus 250 ~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~ 329 (368)
+ ...++...........++..+-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.++
T Consensus 224 ~-~~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vv 302 (334)
T PF06027_consen 224 E-SIHWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVV 302 (334)
T ss_pred h-ccCCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhhe
Confidence 1 111223333333333446667788888999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccc
Q 017672 330 VLWGKNREE 338 (368)
Q Consensus 330 ~~~~~~~~~ 338 (368)
+....+++.
T Consensus 303 y~~~~~~~~ 311 (334)
T PF06027_consen 303 YNLAESPEE 311 (334)
T ss_pred EEccCCccc
Confidence 887665443
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=2.8e-26 Score=215.27 Aligned_cols=284 Identities=11% Similarity=0.054 Sum_probs=221.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCC--CHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPL--SYSSVCKIFLVSLFG 89 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 89 (368)
+.+...+.+.--.+-.......|.+.+. ++ |+.++++|++++.+++.++..... ++.++. .++++..++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGF-RKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCHHHHHHHHHHHHHHH
Confidence 4455556666666667778889999997 99 999999999999887665543222 222333 245778889999988
Q ss_pred HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672 90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW 169 (368)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~ 169 (368)
... +...+.|+++++++.++++.++.|+++++++++++|||++++ ++.+++++++|+++.+. +
T Consensus 125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~-------- 187 (350)
T PTZ00343 125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K-------- 187 (350)
T ss_pred HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c--------
Confidence 665 446779999999999999999999999999999999999999 99999999999999863 1
Q ss_pred ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC------CcchhHHHHHHHHHHHHHHHHHH
Q 017672 170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP------AKVRLTTLQCFFSCIQSAFWAVA 243 (368)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 243 (368)
+.+....|++++++|+++|+++.+..|+..++.+ ++.....+....+.++++|+...
T Consensus 188 -----------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~ 250 (350)
T PTZ00343 188 -----------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLF 250 (350)
T ss_pred -----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122367999999999999999999999887643 12345555678888888888765
Q ss_pred hhcCC--Ccc----cccchhhHHHHHHHHHHhhhHHHHHHHH----HHhccCcceeeecchhHHHHHHHHHHHHhccccc
Q 017672 244 AERNP--SAW----KLGWDIHLVSVVYCGLVINGITYWIQVW----AIEKKGPVFIAIFTPFALIITAIFSAFLWKETLH 313 (368)
Q Consensus 244 ~~~~~--~~~----~~~~~~~~~~l~~~gi~~~~i~~~l~~~----a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~ 313 (368)
.|... ..+ .......+..+++ .++.+++.+++++. ++++++|...++..+++|+++++++++++||+++
T Consensus 251 ~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt 329 (350)
T PTZ00343 251 FEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVT 329 (350)
T ss_pred HhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCc
Confidence 54321 011 0001112233344 35567888888885 9999999999999999999999999999999999
Q ss_pred chhHhHHHHHHHHHHHhhcc
Q 017672 314 WGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 314 ~~~~~G~~lii~gi~~~~~~ 333 (368)
+.+++|+++++.|++++.+-
T Consensus 330 ~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 330 LLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHhHHHHHHHHHHHHHHhhc
Confidence 99999999999999998754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=4.7e-26 Score=205.51 Aligned_cols=248 Identities=12% Similarity=0.126 Sum_probs=183.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCHHH-HHHHHHHHHH
Q 017672 15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQ-----NASPLSYSS-VCKIFLVSLF 88 (368)
Q Consensus 15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 88 (368)
+|++++++++++||.++++.|. .++ ++|.++.++|++++.+++.++...++++ +.++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 454 9999999999999998887765433221 111112233 3345555555
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN 168 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~ 168 (368)
...++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|++++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 5788889999999999999999999999999999999999999999 99999999999998864211
Q ss_pred CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC
Q 017672 169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP 248 (368)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (368)
+ .. .+++.++++|+.|.+..|+..++ +. ...... .........+.. ...+..
T Consensus 146 ------------------~-~~-----~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~~-~~~~~~ 197 (256)
T TIGR00688 146 ------------------S-LP-----WEALVLAFSFTAYGLIRKALKNT-DL-AGFCLE-TLSLMPVAIYYL-LQTDFA 197 (256)
T ss_pred ------------------C-ch-----HHHHHHHHHHHHHHHHHhhcCCC-Cc-chHHHH-HHHHHHHHHHHH-HHhccC
Confidence 1 11 35788999999999999996543 32 222211 112222222111 111111
Q ss_pred CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHH
Q 017672 249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL 307 (368)
Q Consensus 249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~ 307 (368)
......+...|..+++.|++ +.++|.++++++|+.++++++...+++|+++.+++.++
T Consensus 198 ~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 198 TVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred cccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 11111222467888888875 88999999999999999999999999999999999874
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=1.8e-23 Score=191.77 Aligned_cols=284 Identities=21% Similarity=0.299 Sum_probs=217.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (368)
++...+..+.++..+.|+......|...++..++....+.|...+.++..+.....+....+. .+.+....+.+.+..
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPA--LRPWLLLLLLALLGL 80 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccccc--ccchHHHHHHHHHHH
Confidence 346677888888999999999999998775356666667699988887444332221111121 222456677777778
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHH-HHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCC
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAG-LLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNW 169 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~-~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~ 169 (368)
.....+++.++++++++.++++.++.|+++.+++. +++|||++++ ++.++.+++.|++++...+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~------ 148 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG------ 148 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc------
Confidence 88999999999999999999999999999999997 7779999999 9999999999999997522110
Q ss_pred ChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH-HHHHHHHHHHHHHHHHhhcCC
Q 017672 170 YPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT-LQCFFSCIQSAFWAVAAERNP 248 (368)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 248 (368)
... ...|+.+++.++++++++.+..|+.. +.++ ..... +..........+.. .. ..
T Consensus 149 -----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~--~~-~~ 205 (292)
T COG0697 149 -----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLGP-VTLALLLQLLLALLLLLLFF--LS-GF 205 (292)
T ss_pred -----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCh-HHHHHHHHHHHHHHHHHHHH--hc-cc
Confidence 111 57899999999999999999999987 4332 44444 33331111111211 11 11
Q ss_pred CcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHH
Q 017672 249 SAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLY 328 (368)
Q Consensus 249 ~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~ 328 (368)
+ .......+..+.+.|++.+++++.++++++++.++.+.+.+.+++|+++.+++++++||+++..+++|+.+++.|+.
T Consensus 206 ~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~ 283 (292)
T COG0697 206 G--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL 283 (292)
T ss_pred c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 1 12233568888999999998999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhcc
Q 017672 329 SVLWG 333 (368)
Q Consensus 329 ~~~~~ 333 (368)
+...+
T Consensus 284 l~~~~ 288 (292)
T COG0697 284 LASLR 288 (292)
T ss_pred HHhcc
Confidence 88765
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.91 E-value=2.5e-22 Score=175.28 Aligned_cols=282 Identities=12% Similarity=0.139 Sum_probs=226.8
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccC-CCC--CCHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQN-ASP--LSYSSVCKIFLVSL 87 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~-~~~--~~~~~~~~~~~~g~ 87 (368)
.+..+|+++.+.+.++||..+...|.+ +. .++.++...|...+.+++..+....++++ ..+ .+++.+....+.++
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~ 80 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL 80 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence 456789999999999999999999966 44 89999999999999998887765543321 111 12345555555555
Q ss_pred HHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCC
Q 017672 88 FGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFL 167 (368)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~ 167 (368)
+ +..++..|.+|.++...-++++-++..|++.++++.+|+|||+++. |+++++++.+||....+..|+
T Consensus 81 l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~----- 148 (293)
T COG2962 81 L-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS----- 148 (293)
T ss_pred H-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC-----
Confidence 5 6899999999999999999999999999999999999999999999 999999999999999885332
Q ss_pred CCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017672 168 NWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERN 247 (368)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (368)
.. ..++.-++.|+.|....|+. +.++ .+.....+..-.+..+.+.+..+..
T Consensus 149 ------------------------lp--wval~la~sf~~Ygl~RK~~--~v~a-~~g~~lE~l~l~p~al~yl~~l~~~ 199 (293)
T COG2962 149 ------------------------LP--WVALALALSFGLYGLLRKKL--KVDA-LTGLTLETLLLLPVALIYLLFLADS 199 (293)
T ss_pred ------------------------Cc--HHHHHHHHHHHHHHHHHHhc--CCch-HHhHHHHHHHHhHHHHHHHHHHhcC
Confidence 11 23466678999999997774 3344 7777788877777777777665554
Q ss_pred CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672 248 PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL 327 (368)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi 327 (368)
.+.....+...+..++..|. .+.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++.-++...++|-.|+
T Consensus 200 ~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL 278 (293)
T COG2962 200 GQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL 278 (293)
T ss_pred chhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 43111233345666666676 67799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccc
Q 017672 328 YSVLWGKNR 336 (368)
Q Consensus 328 ~~~~~~~~~ 336 (368)
.++.+..-+
T Consensus 279 ~l~~~d~l~ 287 (293)
T COG2962 279 ALFSIDGLY 287 (293)
T ss_pred HHHHHHHHH
Confidence 988765443
No 15
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.91 E-value=2.4e-25 Score=190.04 Aligned_cols=293 Identities=17% Similarity=0.166 Sum_probs=217.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT 91 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (368)
+..+|.++..++ ..+....++.+...+ .+|....-.|+++-.++-.|-.+.++...+.+ .....++++.|.+|..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp--~g~R~~LiLRg~mG~t 109 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPVIGP--EGKRKWLILRGFMGFT 109 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeeeecC--CCcEEEEEeehhhhhh
Confidence 677888888888 555555555555555 69999999998877777666554444333222 2334456777888755
Q ss_pred HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCCh
Q 017672 92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYP 171 (368)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~ 171 (368)
+-+ +.|+|++|.+.+++++|..+.|+++.+++|+++|||.++. +.++..+.+.|++++.- .+. .+.++
T Consensus 110 gvm-lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIvR--PpF-lFG~~-- 177 (346)
T KOG4510|consen 110 GVM-LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIVR--PPF-LFGDT-- 177 (346)
T ss_pred HHH-HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEec--CCc-ccCCC--
Confidence 444 7778999999999999999999999999999999999999 99999999999999963 221 11111
Q ss_pred hhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 017672 172 EIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW 251 (368)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (368)
++++++. ....+.+|...++.+++.-|--.++.|+..|+.+. .....+...++.+..++...... .+
T Consensus 178 -------t~g~~~s-~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig----~~ 244 (346)
T KOG4510|consen 178 -------TEGEDSS-QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIG----AV 244 (346)
T ss_pred -------ccccccc-cccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhcc----ce
Confidence 1111111 12344567888888888888888889998888765 55555556666665555442221 22
Q ss_pred ccc-chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 252 KLG-WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 252 ~~~-~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
..+ ...+|+.++.+|++ +.+++.+.+.++|+..+...+++.+++.+++.+++.++|||.|++++|.|+++++.+.+.+
T Consensus 245 ~lP~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 245 QLPHCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred ecCccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 222 23567777888884 4689999999999999999999999999999999999999999999999999999998777
Q ss_pred hcccc
Q 017672 331 LWGKN 335 (368)
Q Consensus 331 ~~~~~ 335 (368)
...|.
T Consensus 324 a~~kw 328 (346)
T KOG4510|consen 324 ALKKW 328 (346)
T ss_pred HHHHH
Confidence 65443
No 16
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.90 E-value=1.8e-21 Score=165.43 Aligned_cols=274 Identities=14% Similarity=0.106 Sum_probs=224.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672 15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSL 94 (368)
Q Consensus 15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (368)
.++..++.+++.-=....+.|.+... +.+.-.+.+|..++.+++..+...++ .+.++++++.++..|+.- ...+
T Consensus 12 ~p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPwr----~r~~~~~~~~~~~yGvsL-g~MN 85 (292)
T COG5006 12 LPILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPWR----RRLSKPQRLALLAYGVSL-GGMN 85 (292)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHHH----hccChhhhHHHHHHHHHH-HHHH
Confidence 37888888888888889999999998 99999999999999999998765433 234578899999999774 5666
Q ss_pred HHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672 95 NLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ 174 (368)
Q Consensus 95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 174 (368)
.+||.+++..|.+.+..+.++.|+.+..++-= | .+ ..+.+.+++.|+.++.-. ++.
T Consensus 86 l~FY~si~riPlGiAVAiEF~GPL~vA~~~sR----r--~~------d~vwvaLAvlGi~lL~p~-~~~----------- 141 (292)
T COG5006 86 LLFYLSIERIPLGIAVAIEFTGPLAVALLSSR----R--LR------DFVWVALAVLGIWLLLPL-GQS----------- 141 (292)
T ss_pred HHHHHHHHhccchhhhhhhhccHHHHHHHhcc----c--hh------hHHHHHHHHHHHHhheec-cCC-----------
Confidence 69999999999999999999999988876641 1 34 778888999999988642 211
Q ss_pred hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 017672 175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG 254 (368)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (368)
...-+..|..+++.++.||+.|.+..+|..+..+. -.....-+.++.++.+|+......+ . ..
T Consensus 142 ------------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g-~~g~a~gm~vAaviv~Pig~~~ag~--~--l~ 204 (292)
T COG5006 142 ------------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHG-TAGVAVGMLVAALIVLPIGAAQAGP--A--LF 204 (292)
T ss_pred ------------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC-chHHHHHHHHHHHHHhhhhhhhcch--h--hc
Confidence 34455799999999999999999999998865443 6788888999999999988543222 1 22
Q ss_pred chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672 255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 255 ~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~ 334 (368)
+..-...-+..+++.+.+.|.+-..++++.+....+.+.++||.++.+.|++++||.+|+.||+|+++|+.+..-..+..
T Consensus 205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 22334455677889999999999999999999999999999999999999999999999999999999999877655533
Q ss_pred c
Q 017672 335 N 335 (368)
Q Consensus 335 ~ 335 (368)
+
T Consensus 285 ~ 285 (292)
T COG5006 285 R 285 (292)
T ss_pred C
Confidence 3
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=2.7e-21 Score=176.99 Aligned_cols=277 Identities=12% Similarity=0.087 Sum_probs=203.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN 95 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (368)
+++++++++++||.+.+..|... |.++.++. |..++.+++..+....+.+++. .++.+..-++.|.+ ....+.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~--~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPEFW--ALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCccc--ccHHHHHHHHHHHH-HHhhhh
Confidence 57889999999999999999865 58887765 7777777776665543322111 13333333444433 677788
Q ss_pred HHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccc----hhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 96 LYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAK----VLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 96 ~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~----~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
+|+.+.++++.+.+..+.+ +.+++..+.+.+++||+.+.+ + ++|++++++|++++...++++.
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~------ 142 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSA------ 142 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccccc------
Confidence 9999999999999999998 888999999999999999999 8 9999999999888854211100
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA 250 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (368)
++....+..+|++++++++++|+.|.+..|+. ++++ .+..+.+...-.+....+....... .+
T Consensus 143 -------------~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~-~~ 205 (290)
T TIGR00776 143 -------------GIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVDG-LSVLLPQAIGMVIGGIIFNLGHILA-KP 205 (290)
T ss_pred -------------ccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCCc-ceehhHHHHHHHHHHHHHHHHHhcc-cc
Confidence 00000233679999999999999999999986 3544 7775555442222222211111101 11
Q ss_pred ccccchhhHHHHHHHHHHhhhHHHHHHHHHHh-ccCcceeeecchhHHHHHHHHHHHHhcccccchhH----hHHHHHHH
Q 017672 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIE-KKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSV----GGAVLLVG 325 (368)
Q Consensus 251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~-~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~ 325 (368)
+ .. ...+..+..|++ ..+++.+|..+.+ +.+++.++++.+.+|+++.+++++++||+.++.++ +|+++++.
T Consensus 206 ~--~~-~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~ 281 (290)
T TIGR00776 206 L--KK-YAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIII 281 (290)
T ss_pred h--HH-HHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHH
Confidence 1 12 233334447877 6899999999999 99999999999999999999999999999999999 99999999
Q ss_pred HHHHhhc
Q 017672 326 GLYSVLW 332 (368)
Q Consensus 326 gi~~~~~ 332 (368)
|+.+...
T Consensus 282 ~~~l~~~ 288 (290)
T TIGR00776 282 AANILGI 288 (290)
T ss_pred HHHHHhc
Confidence 9887654
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.86 E-value=2.5e-19 Score=165.48 Aligned_cols=268 Identities=14% Similarity=0.140 Sum_probs=207.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHH
Q 017672 43 NPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFV 122 (368)
Q Consensus 43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l 122 (368)
.|..+++.++....++..+.....+++.. ++..+..+...+++. .++..+.+.|++|.|.....++.++.|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 48899999999998887776655442222 234455566666664 66677899999999999999999999999999
Q ss_pred HHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHH
Q 017672 123 LAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISAN 202 (368)
Q Consensus 123 l~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~ 202 (368)
++.+++|+|.+++ ++.++++.++|+++....+.+.. +.++........|+++.+++.
T Consensus 107 ~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~-----------------~~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 107 LGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSS-----------------SSSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHHhcCccccHH------HHHHHHHHHhhHheeeecccccc-----------------cccccccccchhHHHHHHHHH
Confidence 9999999999999 99999999999999987432211 111112222334999999999
Q ss_pred HHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--hhcCCCccccc-chhhHHHHHHHHHHhhhHHHHHHH
Q 017672 203 TAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA--AERNPSAWKLG-WDIHLVSVVYCGLVINGITYWIQV 278 (368)
Q Consensus 203 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~l~~~gi~~~~i~~~l~~ 278 (368)
++.|...+.+++..++++ ++.+.+++.+.++.+...+.... .++..+.+... ..+.....+..-.+++.+++...+
T Consensus 164 ~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~ 243 (303)
T PF08449_consen 164 LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIF 243 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998776 45789999999999988877766 22221111111 112233333333446778888888
Q ss_pred HHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672 279 WAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 279 ~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
+..++.+|...+++..++.+++++++.+++|+++++.+|+|.++++.|..++.+.|+++
T Consensus 244 ~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 244 YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999998876654
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.79 E-value=6.5e-18 Score=151.56 Aligned_cols=301 Identities=13% Similarity=0.189 Sum_probs=222.8
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--ChHHHHHHHHHHHHHHHHHHH-------hhhhccC-------C--
Q 017672 10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGM--NPFVFVVYRQAFASLALSPFA-------FFLESQN-------A-- 71 (368)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~--~~~~~~~~r~~~~~l~l~~~~-------~~~~~~~-------~-- 71 (368)
-+|...|+.++++..++|-.+.-+.+...+++- .|+..++.....-.+.+.++. ...+|.+ .
T Consensus 9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~ 88 (416)
T KOG2765|consen 9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA 88 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence 346778999999999999999999999988733 487777665544333344322 1111100 0
Q ss_pred -----------------------------C---------------------CCCHH------------HHHH-HHHHHHH
Q 017672 72 -----------------------------S---------------------PLSYS------------SVCK-IFLVSLF 88 (368)
Q Consensus 72 -----------------------------~---------------------~~~~~------------~~~~-~~~~g~~ 88 (368)
+ +...| +..+ .+....+
T Consensus 89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l 168 (416)
T KOG2765|consen 89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL 168 (416)
T ss_pred hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 0 00011 2222 2344445
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN 168 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~ 168 (368)
- ..++..++.|+.+++++..+++.++.-+|+..++.++..||+++. |.+++++.+.|++++...+...
T Consensus 169 W-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~----- 236 (416)
T KOG2765|consen 169 W-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ----- 236 (416)
T ss_pred H-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc-----
Confidence 4 455669999999999999999999999999999999999999999 9999999999999997532211
Q ss_pred CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHH---HHHHhh
Q 017672 169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAF---WAVAAE 245 (368)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 245 (368)
.++....+...|+++++++++.||.|.++.||...+.+..+.+..+..++|..-++. ...+.+
T Consensus 237 --------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~ 302 (416)
T KOG2765|consen 237 --------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD 302 (416)
T ss_pred --------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 112244556899999999999999999999998777643355444444444443332 222222
Q ss_pred c-CCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHH
Q 017672 246 R-NPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLV 324 (368)
Q Consensus 246 ~-~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii 324 (368)
. ..+.+..+...+...+++.+.+.++++-++|.+|.-..+|..++.-..++...+++.+.++-|.++++.+++|...|+
T Consensus 303 ~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~If 382 (416)
T KOG2765|consen 303 FFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIF 382 (416)
T ss_pred HhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 2 223455666677788889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccc
Q 017672 325 GGLYSVLWGKNR 336 (368)
Q Consensus 325 ~gi~~~~~~~~~ 336 (368)
+|.+.++...+.
T Consensus 383 v~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 383 VGFVIVNISSEN 394 (416)
T ss_pred HHHhheeccccc
Confidence 998888765443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.75 E-value=6.8e-18 Score=152.93 Aligned_cols=276 Identities=15% Similarity=0.151 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 017672 28 AGMALFSKAAIA--KGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTT 105 (368)
Q Consensus 28 ~~~~~~~k~~~~--~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~ 105 (368)
.......|+.++ ..--|..++.++..++.+.++....+...+..+..++..+..++.+|++. +++..+-+.++.+.+
T Consensus 30 v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~ 108 (316)
T KOG1441|consen 30 VGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVP 108 (316)
T ss_pred eeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccc
Confidence 334456788877 43558888888888777777766555444333322445677788888775 778889999999999
Q ss_pred hhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCC
Q 017672 106 ATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTND 185 (368)
Q Consensus 106 ~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
++..+.+..+.|++++++++++.+|+.+++ .+..+.....|+.+.+..
T Consensus 109 VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~-------------------------- 156 (316)
T KOG1441|consen 109 VSFYQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVT-------------------------- 156 (316)
T ss_pred hhHHHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeec--------------------------
Confidence 999999999999999999999999999999 999999999999998752
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh--hCC-CcchhHHHHHHHHHHHHH-HHHHHhhcCCC---cccccchhh
Q 017672 186 CPIGRWIKGALIMISANTAWSLWLVLQGYIIK--QYP-AKVRLTTLQCFFSCIQSA-FWAVAAERNPS---AWKLGWDIH 258 (368)
Q Consensus 186 ~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~ 258 (368)
+.+-+..|.+.++++.+..+..+++.|+..+ +.+ ++.....++.-.+.+.++ |+....+++.. ... .+...
T Consensus 157 -e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~-~~~~~ 234 (316)
T KOG1441|consen 157 -ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA-PWFVT 234 (316)
T ss_pred -cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc-ccchh
Confidence 2334578999999999999999999999884 222 458888898889988888 77766555432 110 11122
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccc
Q 017672 259 LVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREE 338 (368)
Q Consensus 259 ~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~ 338 (368)
....++.. ++....+...+..+.+++|...++.+.+.-++.++.++++|+++.++.+..|+++.+.|+++|.+.|.+++
T Consensus 235 ~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 235 FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 33333334 45555666777889999999999999999999999999999999999999999999999999998777655
Q ss_pred h
Q 017672 339 R 339 (368)
Q Consensus 339 ~ 339 (368)
+
T Consensus 314 ~ 314 (316)
T KOG1441|consen 314 K 314 (316)
T ss_pred c
Confidence 4
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.70 E-value=2.1e-15 Score=127.06 Aligned_cols=259 Identities=14% Similarity=0.130 Sum_probs=194.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHH
Q 017672 44 PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVL 123 (368)
Q Consensus 44 ~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll 123 (368)
...++++++....++--.+...+++.+..+. +.+ .+...+ ....++....+.|++|+|-....+-.++.|+-++++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir~~~~~D~t--~~~-~YaAcs-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil 128 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIRKKTEIDNT--PTK-MYAACS-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL 128 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeecccccccCC--cch-HHHHHH-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence 4556677777666665554444332222221 112 222233 334566667789999999999999999999999999
Q ss_pred HHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHH
Q 017672 124 AGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANT 203 (368)
Q Consensus 124 ~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 203 (368)
+.++.+.+-+|+ ++.+++++++|+++... +..+. .+..+.+...|-++.+++..
T Consensus 129 GVl~~~KsY~w~------kY~cVL~IV~GValFmY-K~~Kv-------------------~g~e~~t~g~GElLL~lSL~ 182 (337)
T KOG1580|consen 129 GVLFAHKSYHWR------KYCCVLMIVVGVALFMY-KENKV-------------------GGAEDKTFGFGELLLILSLA 182 (337)
T ss_pred ehhhhcccccHH------HHHHHHHHHHHHHHhhc-ccccc-------------------CCCcccccchHHHHHHHHHH
Confidence 999988888888 99999999999999987 32221 12245566789999999999
Q ss_pred HHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCC--cccccchhhHHHHHHHHHHhhhHHHHHHHHH
Q 017672 204 AWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPS--AWKLGWDIHLVSVVYCGLVINGITYWIQVWA 280 (368)
Q Consensus 204 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a 280 (368)
+-+.....+.+..+.+.+ .-..+++.++.+.+.+....++..+..+ .+...-+..|+-+..+++ ++.+++++.+.-
T Consensus 183 mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~t 261 (337)
T KOG1580|consen 183 MDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKT 261 (337)
T ss_pred hcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHH
Confidence 999999999988766552 3568888899998888776655432211 111112245666667776 888999999999
Q ss_pred HhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672 281 IEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 281 ~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
+...+|-.-+++..++.+++++.+.++++.+++..||+|.++++.|...-...
T Consensus 262 v~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~ 314 (337)
T KOG1580|consen 262 VEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVD 314 (337)
T ss_pred HHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhc
Confidence 99999999999999999999999999999999999999999999997765443
No 22
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.68 E-value=1.8e-14 Score=126.22 Aligned_cols=295 Identities=12% Similarity=0.131 Sum_probs=209.4
Q ss_pred CcccchhhhhhhhhhhHHHHHHHHHHH--HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccC---CCCCC
Q 017672 1 MKSLLCRNAFTASQKPYIAMIFVQFAY--AGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQN---ASPLS 75 (368)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~ 75 (368)
|.+...++.++.+....+..++.--+. +..+...+.-.+. -=|+.++.++.++-.++........+++. +...+
T Consensus 1 ~~~~~~~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f-~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~s 79 (349)
T KOG1443|consen 1 MGRWALDNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNF-HFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLS 79 (349)
T ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCc-CCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCc
Confidence 445555555554444444444332222 2333333322222 23888888888887777666554444322 23567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 76 YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
|++..+.+...++..++...+.+++++|++.+..++..+..++|+.+++.+|.-||+++. -..-++++.+|+.+
T Consensus 80 w~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~------L~l~v~lI~~Glfl 153 (349)
T KOG1443|consen 80 WRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWA------LVLIVLLIAVGLFL 153 (349)
T ss_pred HHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHH------HHHHHHHHhhheeE
Confidence 887776655555556888889999999999999999999999999999999999999998 88888888888888
Q ss_pred HhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC----CcchhHHHHHH
Q 017672 156 FAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP----AKVRLTTLQCF 231 (368)
Q Consensus 156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~ 231 (368)
+++ +. .+-...|..+..+++++.++-..+.+...++.| +|....+...-
T Consensus 154 ft~-Ks--------------------------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p 206 (349)
T KOG1443|consen 154 FTY-KS--------------------------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQP 206 (349)
T ss_pred EEe-cc--------------------------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhh
Confidence 876 22 234468999999999998888888887777654 56888888888
Q ss_pred HHHHHHHHHHHHhhcCCC-----cccccchh-hHHHHHHHHHHhhhHHHHH---HHHHHhccCcceeeecchhHHHHHHH
Q 017672 232 FSCIQSAFWAVAAERNPS-----AWKLGWDI-HLVSVVYCGLVINGITYWI---QVWAIEKKGPVFIAIFTPFALIITAI 302 (368)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~l~~~gi~~~~i~~~l---~~~a~~~~~a~~~~~~~~~~pv~~~i 302 (368)
...+.++|..+..|+... .+...+.. .+..+..++. ++..++.+ -+..+.+++....++.+...-+-+.+
T Consensus 207 ~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~ 285 (349)
T KOG1443|consen 207 WMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLL 285 (349)
T ss_pred HHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHH
Confidence 888888888888887632 12222211 2222222222 33344433 33457888999999999999999999
Q ss_pred HHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 303 FSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 303 ~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
++.++.+|.++...|.|..+...|+.++
T Consensus 286 la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 286 LAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=1.1e-13 Score=124.78 Aligned_cols=299 Identities=15% Similarity=0.155 Sum_probs=214.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHhhhhcc----CCCCC------CHHHHHH
Q 017672 15 KPYIAMIFVQFAYAGMALFSKAAIAKG---MNPFVFVVYRQAFASLALSPFAFFLESQ----NASPL------SYSSVCK 81 (368)
Q Consensus 15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g---~~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~------~~~~~~~ 81 (368)
.-.+.+++..+.++...+..|+....+ ..|...+++--.+-.+++....+...+. ..+.+ .+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 556777788899999999999988765 6788888888887777777776655321 11111 2345666
Q ss_pred HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcC
Q 017672 82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKG 161 (368)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~ 161 (368)
+.+-+++ .+..+.++|.++.+.+++..++..++..+.|+++..+++++|++++ ||.++++.++|+.++.....
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 6666666 4677779999999999999999999999999999999999999999 99999999999999963212
Q ss_pred CCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcc-hhHHHHHHHHHHHHHHH
Q 017672 162 PPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKV-RLTTLQCFFSCIQSAFW 240 (368)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (368)
+. .+..+.....+...|....+.+++..+...+.-+|..|+.+.+. ..+....+++.+..+..
T Consensus 168 ~~----------------~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~ 231 (345)
T KOG2234|consen 168 SP----------------TGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLT 231 (345)
T ss_pred CC----------------CCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHH
Confidence 11 01111234567789999999999999999999999998755333 33334444444444444
Q ss_pred HHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHH
Q 017672 241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGA 320 (368)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~ 320 (368)
.+..+.+...|. .--..|-...+..++....+-.+...-+|+.+-..=+....+..+++.+.++.++|-+||....+|+
T Consensus 232 ~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~ 310 (345)
T KOG2234|consen 232 ILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGA 310 (345)
T ss_pred HhhccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 433322211111 1112233333344444445555666667777776667777789999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccc
Q 017672 321 VLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 321 ~lii~gi~~~~~~~~~~ 337 (368)
.+++.++.++...+++.
T Consensus 311 ~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 311 LLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHhhcCCccc
Confidence 99999999998544443
No 24
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.65 E-value=9.9e-16 Score=117.03 Aligned_cols=135 Identities=19% Similarity=0.191 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCC-CCCHHHHHHHHHHHHHHHHHH
Q 017672 15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNAS-PLSYSSVCKIFLVSLFGLTLS 93 (368)
Q Consensus 15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 93 (368)
...+++++++++||...++.|...+. ++|...++.|..+...++..++...++...+ ..+.|.|..+.+.|+. ...+
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla-~gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLA-GGLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHH-HHHH
Confidence 46789999999999999999999996 9999999999999999998888776654332 2467888888887755 4888
Q ss_pred HHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 94 LNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 94 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
+.+||.|++...++...++-.+.|+++++++++|+|||++.. +++|+.++.+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999999 9999999999998874
No 25
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.62 E-value=3.1e-16 Score=133.68 Aligned_cols=284 Identities=15% Similarity=0.158 Sum_probs=211.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (368)
|..+++.+-=+-.++-..+...+..+.+.|.+ |....|+.+..-+++-.++..+|++ . -...|+.++++++...
T Consensus 15 k~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~--~---~~~~~~hYilla~~DV 89 (336)
T KOG2766|consen 15 KTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK--Y---IKAKWRHYILLAFVDV 89 (336)
T ss_pred hhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH--H---HHHHHHHhhheeEEee
Confidence 34444444444444444455555555555444 7788899998888888888776542 1 2345666888887765
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
-.++ +-..|.||++...+.++-......+.+++|+|+|.|-++. ++.|+.+++.|+.++.+.+=
T Consensus 90 EaNy-~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV--------- 153 (336)
T KOG2766|consen 90 EANY-FVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDV--------- 153 (336)
T ss_pred cccE-EEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeee---------
Confidence 5554 7788999999999999999988999999999999999999 99999999999999876311
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCc
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSA 250 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (368)
++ .+..+..+..+|++++++++-+||+.++..+.+.++.+. .+.+....++|.++..+-. ..+... .
T Consensus 154 ---------~a-gd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm~~lgLfGaIIsaIQ~-i~~~~~-~ 220 (336)
T KOG2766|consen 154 ---------HA-GDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELMGFLGLFGAIISAIQF-IFERHH-V 220 (336)
T ss_pred ---------cc-ccccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHHHHHHHHHHHHHHHHH-hhhccc-e
Confidence 11 122245666799999999999999999999999999875 8888888999999888764 433321 1
Q ss_pred ccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 251 WKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 251 ~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
....++......+. ..++..+-|.+.-..+|..+++..++-..+.-.+++++ ..||-+.+|..++..+.+..|.+++
T Consensus 221 ~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiY 297 (336)
T KOG2766|consen 221 STLHWDSAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIY 297 (336)
T ss_pred eeEeehHHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEe
Confidence 12222222222222 44566666777777889999999999999999999988 6788889999999999999999888
Q ss_pred hc
Q 017672 331 LW 332 (368)
Q Consensus 331 ~~ 332 (368)
..
T Consensus 298 s~ 299 (336)
T KOG2766|consen 298 ST 299 (336)
T ss_pred ec
Confidence 44
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.6e-14 Score=126.61 Aligned_cols=265 Identities=13% Similarity=0.147 Sum_probs=205.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHH
Q 017672 43 NPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFV 122 (368)
Q Consensus 43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~l 122 (368)
++..+.+.+-+++.++-..+...++++.. .++.+..+...++.+ .....|.|.|++|++-..-.+-.++..+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~~---~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKELS---GVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccccCC---CCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 57788888888887777555444333322 245566677777776 45556999999999999999999999999999
Q ss_pred HHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHH
Q 017672 123 LAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISAN 202 (368)
Q Consensus 123 l~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~ 202 (368)
++.++.|.|.+.. +++...++..|+.+....+.++ ..++....+...|+.+.....
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~------------------s~~~~g~~ns~~G~~Ll~~~L 181 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSD------------------SSSKSGRENSPIGILLLFGYL 181 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCC------------------CccccCCCCchHhHHHHHHHH
Confidence 9999988888888 9999999999999998753321 112224456789999999999
Q ss_pred HHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCccc--ccchhhHHHHHHHHHHhhhHHHHHHHH
Q 017672 203 TAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK--LGWDIHLVSVVYCGLVINGITYWIQVW 279 (368)
Q Consensus 203 ~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~~~~i~~~l~~~ 279 (368)
++-+..+..++++.+++. .++..+++.++++.+......+......+... ...+..+.-++.... ++.+++.+.++
T Consensus 182 ~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~ 260 (327)
T KOG1581|consen 182 LFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFY 260 (327)
T ss_pred HHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehh
Confidence 999999999999988765 45789999999999988877433222211111 111122334444444 67799999999
Q ss_pred HHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccc
Q 017672 280 AIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNR 336 (368)
Q Consensus 280 a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~ 336 (368)
-+++.|+..-+.+..++-+++++++.+.+|.+.++.||.|..+++.|+.+-...+.+
T Consensus 261 TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 261 TIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999988766655
No 27
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.62 E-value=2.9e-14 Score=126.61 Aligned_cols=229 Identities=15% Similarity=0.136 Sum_probs=168.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672 75 SYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL 154 (368)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~ 154 (368)
++++..++.+-+++ ...++.+.+.++++++++..+++.++..+++++++.+++|+|++.+ ||.++.+.++|++
T Consensus 13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 36778888888877 4777779999999999999999999999999999999999999999 9999999999999
Q ss_pred HHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHH
Q 017672 155 VFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFS 233 (368)
Q Consensus 155 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (368)
++...+....+..+ ++....+....+...|+++.+.++++.|+..+..+|..|+.+. .+..+......+
T Consensus 86 lv~~~~~~~~~~~~----------~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~g 155 (244)
T PF04142_consen 86 LVQLSSSQSSDNSS----------SSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFG 155 (244)
T ss_pred eeecCCcccccccc----------ccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 98642211100000 0000011134556799999999999999999999999998753 244555555566
Q ss_pred HHHHHHHHHHhhcC-CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccc
Q 017672 234 CIQSAFWAVAAERN-PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETL 312 (368)
Q Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~ 312 (368)
.+..++.....+.+ ..+.... ..+-...+..++...++=++....+|+.+...=+.....+.+++.++++++||.++
T Consensus 156 i~~~~~~~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~ 233 (244)
T PF04142_consen 156 ILFNLLALLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPP 233 (244)
T ss_pred HHHHHHHHhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 66655554333222 1111111 22223344444555566667778899999999999999999999999999999999
Q ss_pred cchhHhHHHH
Q 017672 313 HWGSVGGAVL 322 (368)
Q Consensus 313 ~~~~~~G~~l 322 (368)
+....+|+.+
T Consensus 234 s~~f~lg~~~ 243 (244)
T PF04142_consen 234 SLSFLLGAAL 243 (244)
T ss_pred chHHhhheec
Confidence 9999999865
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=1.6e-12 Score=115.64 Aligned_cols=293 Identities=13% Similarity=0.088 Sum_probs=220.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHH--HHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFV--VYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLF 88 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~--~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 88 (368)
+...+...++.-.+.--.+.+..|.+... +.+ ..+. .++.+.+.+.+...-..+- -+.++++++..++.+...++
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~-~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFP-MGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLL 86 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHH
Confidence 44455666666666666778888987765 333 3333 4788777766665443332 23566778888888877777
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCC
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLN 168 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~ 168 (368)
- .++...-..+++|.++...+++....|+++++....++|.|++.+ .+.++...++|.......
T Consensus 87 f-~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~--------- 150 (314)
T KOG1444|consen 87 F-VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT--------- 150 (314)
T ss_pred H-HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---------
Confidence 4 566667788999999999999999999999999999999777777 999999998888887541
Q ss_pred CChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcC
Q 017672 169 WYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERN 247 (368)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (368)
+......|+.+++...+..+.+.+..|+..+..+ +.+...++..+.+.+......+++++.
T Consensus 151 ------------------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~ 212 (314)
T KOG1444|consen 151 ------------------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGEL 212 (314)
T ss_pred ------------------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcch
Confidence 1222345999999999999999999999876544 457899999999999888888666542
Q ss_pred CC---cc-cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672 248 PS---AW-KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL 323 (368)
Q Consensus 248 ~~---~~-~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li 323 (368)
.. +. .......+..+...++++.++.| +-.+..+..++...++++..+...+.+-..++++++.++..++|..+-
T Consensus 213 ~~l~~~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~ 291 (314)
T KOG1444|consen 213 DALSLNFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVG 291 (314)
T ss_pred HHHHhhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHH
Confidence 10 11 01122345666666666655555 778899999999999999888888888888888999999999999999
Q ss_pred HHHHHHhhccccccchhc
Q 017672 324 VGGLYSVLWGKNREERIN 341 (368)
Q Consensus 324 i~gi~~~~~~~~~~~~~~ 341 (368)
+.|..++.+.+.++++.+
T Consensus 292 ~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 292 FFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hhhhhHHhhhhhhhccCC
Confidence 999998888776554443
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.59 E-value=4.3e-14 Score=108.14 Aligned_cols=136 Identities=14% Similarity=0.092 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhH
Q 017672 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGI 272 (368)
Q Consensus 193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i 272 (368)
...++++++++++++..++.|-..++.++ ...++.+.....+.+..+.....+. +.....+...|..+++.|+ .+++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~vdp-~~At~IRtiVi~~~l~~v~~~~g~~-~~~~~~~~k~~lflilSGl-a~gl 79 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEGVDP-DFATTIRTIVILIFLLIVLLVTGNW-QAGGEIGPKSWLFLILSGL-AGGL 79 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCc-cHHHHHHHHHHHHHHHHHHHhcCce-ecccccCcceehhhhHHHH-HHHH
Confidence 35789999999999999999999998875 8888899888888777766554332 2221234567888888885 8889
Q ss_pred HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+..+|++|++..+++++..+..++|++++++++++++|+++..+++|+++|++|.+++.
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999999999999999987764
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=2.4e-14 Score=114.23 Aligned_cols=125 Identities=22% Similarity=0.398 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 017672 25 FAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYT 104 (368)
Q Consensus 25 ~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 104 (368)
++||...++.|...++ .||....++|+..+.+ ++++....+++...+.+++++......+.++...++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999998 9999999999999998 6665555554434556678888888889887788899999999999
Q ss_pred ChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 105 TATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 105 ~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
+++.++++.++.|+++.+++++++||+++++ +++|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999874
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.44 E-value=3.5e-13 Score=107.47 Aligned_cols=125 Identities=16% Similarity=0.350 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHh
Q 017672 203 TAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIE 282 (368)
Q Consensus 203 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~ 282 (368)
++||.+.+..|+..++.++ ....++++..+.+ .++.....+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISP-LSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCCH-HHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 4689999999999998765 9999999999998 666555544432 22334466778888898888999999999999
Q ss_pred ccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 283 KKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 283 ~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988764
No 32
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.42 E-value=1e-11 Score=107.70 Aligned_cols=279 Identities=15% Similarity=0.149 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHh---cC----CChHHHHHHHHHHHHHHHHHHHhhhhccCCCCC-------------CHHHHHHHHH
Q 017672 25 FAYAGMALFSKAAIA---KG----MNPFVFVVYRQAFASLALSPFAFFLESQNASPL-------------SYSSVCKIFL 84 (368)
Q Consensus 25 ~~~~~~~~~~k~~~~---~g----~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 84 (368)
..-+++.+..|++-+ +| -+|+..+..-++.-++++..+.+.+.+...+.. +.+.. .++.
T Consensus 13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~-lfl~ 91 (372)
T KOG3912|consen 13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPV-LFLP 91 (372)
T ss_pred hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcc-eecC
Confidence 344567888888653 22 247777777787777787777765544322210 01111 1222
Q ss_pred HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672 85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPL 164 (368)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~ 164 (368)
-+++- .....+.|.|+++++++..+++.....+|+.+++-.+++.+++.+ ||+|+....+|++++...+-
T Consensus 92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~--- 161 (372)
T KOG3912|consen 92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDV--- 161 (372)
T ss_pred hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeec---
Confidence 44454 445558889999999999999999999999999999999999999 99999999999999864210
Q ss_pred CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH
Q 017672 165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA 243 (368)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 243 (368)
. ...+.-+.-++...|+++.++|-+.-|+.+++.+|..++.+ +|.....+.-+++.+....++..
T Consensus 162 ~--------------~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~ 227 (372)
T KOG3912|consen 162 H--------------LVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIP 227 (372)
T ss_pred c--------------cccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHH
Confidence 0 00001112355678999999999999999999999888776 67899999999997665555544
Q ss_pred hhcCCC--ccc------ccch---------hhHHHHHHHHHHhhhHHHHHHH----HHHhccCcceeeecchhHHHHHHH
Q 017672 244 AERNPS--AWK------LGWD---------IHLVSVVYCGLVINGITYWIQV----WAIEKKGPVFIAIFTPFALIITAI 302 (368)
Q Consensus 244 ~~~~~~--~~~------~~~~---------~~~~~l~~~gi~~~~i~~~l~~----~a~~~~~a~~~~~~~~~~pv~~~i 302 (368)
...-+. .+. ..+. .....+...|. .++..+++ +-.|..+++.-..+..++..+.-+
T Consensus 228 m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv 304 (372)
T KOG3912|consen 228 MYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWV 304 (372)
T ss_pred HhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhH
Confidence 322110 000 0010 11122233333 23333333 235667888888999999999999
Q ss_pred HHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 303 FSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 303 ~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
++.....|.++..|+.|.++.+.|++++.
T Consensus 305 ~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 305 FSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999885
No 33
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=5.8e-12 Score=109.06 Aligned_cols=263 Identities=10% Similarity=0.065 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccc-cChhhhhhcccchhHHHHHH
Q 017672 45 FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINY-TTATFAAATTNTIPAITFVL 123 (368)
Q Consensus 45 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~i~~~~p~~~~ll 123 (368)
-.+++.++++.+.--+++.--. ....++++.|++...+. + +...+.+-++++++ .+...--++.+-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~---m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVA---M-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehh---e-eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 4567777777766655543100 11234555676665543 2 23345577789988 66677778889999999999
Q ss_pred HHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHH
Q 017672 124 AGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANT 203 (368)
Q Consensus 124 ~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~ 203 (368)
++++.|.|-+.+ |+.++.+..+|+++.++.+.++.+. ..++=..++.......+..|+.+...|.+
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--------~~~~l~~~~~~~~~~~w~iGi~lL~~al~ 174 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--------KLSGLDSGSAQSDFFWWLIGIALLVFALL 174 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--------hhcccccCcccccchHHHHHHHHHHHHHH
Confidence 999977777777 9999999999999998765443221 11111222233345677899999999999
Q ss_pred HHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHH--------hhcC---CCcccccchhhHHHHHHHHHHhhh
Q 017672 204 AWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVA--------AERN---PSAWKLGWDIHLVSVVYCGLVING 271 (368)
Q Consensus 204 ~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~l~~~gi~~~~ 271 (368)
..|...+.++...+++. ++-+.+++..+.+....+...-- ...+ .+......+..|..+ +.++
T Consensus 175 ~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yL-----l~n~ 249 (330)
T KOG1583|consen 175 LSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYL-----LFNV 249 (330)
T ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHH-----HHHH
Confidence 99999999998888777 55688888888777655543200 0000 001111111233333 2344
Q ss_pred HHHHHHHHHH----hccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 272 ITYWIQVWAI----EKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 272 i~~~l~~~a~----~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+.++.-..++ .+.++-.++++..++..++.+++.++|+.+++++.|+|+.+++.|.+++.
T Consensus 250 L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 250 LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 4555554443 44567788899999999999999999999999999999999999987765
No 34
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=1e-12 Score=113.53 Aligned_cols=269 Identities=13% Similarity=0.074 Sum_probs=196.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhhhcc----CCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccch
Q 017672 43 NPFVFVVYRQAFASLALSPFAFFLESQ----NASP--LSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTI 116 (368)
Q Consensus 43 ~~~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~ 116 (368)
.|..+.+++.++...+...+.....+- ..++ ++.+.-+.++-+.+.- .+....-+.+++|++++...+-.++.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchh
Confidence 378888999988888777766543331 1222 3444444444444432 33344556899999999999999999
Q ss_pred hHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHH
Q 017672 117 PAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGAL 196 (368)
Q Consensus 117 p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 196 (368)
.+|+.++.++++|+|-+.. -..+..+++.|..+=.-.+|. ...-...|.+
T Consensus 139 tvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~~------------------------~~~ls~~Gvi 188 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEGS------------------------TGTLSWIGVI 188 (347)
T ss_pred hhHHHHhHHhhcccccccc------cceeehhheehheeccccccc------------------------cCccchhhhH
Confidence 9999999999999998888 777777777766554321110 2334468999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhCCC-cchhHHHHHHHHHHHHHHHHHHhhcCCCccc---ccchhhHHHHHHHHHHhhhH
Q 017672 197 IMISANTAWSLWLVLQGYIIKQYPA-KVRLTTLQCFFSCIQSAFWAVAAERNPSAWK---LGWDIHLVSVVYCGLVINGI 272 (368)
Q Consensus 197 ~~l~a~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~gi~~~~i 272 (368)
+.+.|.++-|+..+..||......+ -+.++++.+..+.++++|...+.+.-...+. .+....|..+.+.|+++..+
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~m 268 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAM 268 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999987654442 4688999999999999998866543222221 22334566666667665555
Q ss_pred HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccchhccc
Q 017672 273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREERINKI 343 (368)
Q Consensus 273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~~~~~~ 343 (368)
+| .-.+-+|-.+|..-++-....-..-.+++..+++|.-+..-|.|-.++++|...+.+.|.++.+++..
T Consensus 269 gy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 269 GY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred hh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 44 33455888999999999988889999999999999999999999999999999999887776655433
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.32 E-value=3.7e-11 Score=108.52 Aligned_cols=134 Identities=18% Similarity=0.283 Sum_probs=115.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNP--FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFG 89 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (368)
...+|.+++++++++|+......|...++ .++ .....+++.++.+++.++.+..++.. ..+.+++...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHH
Confidence 45689999999999999999999998875 664 45555789999998888876544322 23567777788888888
Q ss_pred HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672 90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL 154 (368)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~ 154 (368)
...++.++++++++.+++.++.+.++.|+++.++++++++|+++.. +++|..+.+.|++
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 8889999999999999999999999999999999999999999999 9999999999863
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.29 E-value=2.7e-11 Score=101.68 Aligned_cols=277 Identities=12% Similarity=0.093 Sum_probs=193.2
Q ss_pred HHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChh
Q 017672 30 MALFSKAAIAK-GMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTAT 107 (368)
Q Consensus 30 ~~~~~k~~~~~-g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 107 (368)
+....|+..+. |.+ .+.+++.+.+++.+-+.++-+.+..+.+ .-+.+.|...-++-+..+ ..--.+++|.++.
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiSfLLv~MI----yt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPISFLLVVMI----YTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHHHHHHHHH----Hhcccceeeeeee
Confidence 34455665543 333 3455677777666655555443332222 112344444332222222 2334899999999
Q ss_pred hhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCC
Q 017672 108 FAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCP 187 (368)
Q Consensus 108 ~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
..+++.++..+.++.....+++.|++.. +..+.++.++.-....+.+.+. . ...
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~-----------~---------~~~ 149 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQA-----------S---------AFK 149 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhH-----------H---------HHH
Confidence 9999999999999999999999999999 9999999888888776532110 0 002
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCc-ccccch-hhHHHHHH
Q 017672 188 IGRWIKGALIMISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSA-WKLGWD-IHLVSVVY 264 (368)
Q Consensus 188 ~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~l~~ 264 (368)
.+..+.|++++...++..+.+....|+..+-.+ .....+++.+..+..+++.+.++.|+..+. .....+ -...++..
T Consensus 150 ~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~I 229 (309)
T COG5070 150 AQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFI 229 (309)
T ss_pred hcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHH
Confidence 235568999999999999999999988765322 237889999999999999988887664221 111111 22445555
Q ss_pred HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccccc
Q 017672 265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNREE 338 (368)
Q Consensus 265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~~ 338 (368)
.|+..-+++ ++-.|.++..+.+..++++.++..-..+-|.++|+|+.+..++....+-..+..++...+.+++
T Consensus 230 Sgl~svgiS-y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 230 SGLCSVGIS-YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred HHHHHhhhh-hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666444444 4778999999999999999999999999999999999999999998888777666665554443
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.23 E-value=5.4e-09 Score=92.72 Aligned_cols=252 Identities=14% Similarity=0.121 Sum_probs=169.7
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhccc-chhH
Q 017672 42 MNPFVFVVYRQAFASLALSPFAFFLESQNASPLS--YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTN-TIPA 118 (368)
Q Consensus 42 ~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~ 118 (368)
-+|.+..+.-.+-+.++- .......+ |..+ .+.+..-++.|++- ...+..++.+.++.+++.+-++.. +.-+
T Consensus 10 G~~~~Q~lG~t~Gali~a-lv~~~~~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFA-LVVFLFRQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred CcHHHHHHHHHHHHHHHH-HHHHHHhC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 445554444444333333 33333332 3333 36677677777765 778889999999999999999886 6677
Q ss_pred HHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHH
Q 017672 119 ITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIM 198 (368)
Q Consensus 119 ~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 198 (368)
.+.+++.++++|--+..+. ..-..++++.++|+.+....++++ +..++..+...|++..
T Consensus 85 g~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~-------------------~~~~~~~~~~kgi~~L 143 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKS-------------------DKSSSKSNMKKGILAL 143 (269)
T ss_pred HHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccc-------------------cccccccchhhHHHHH
Confidence 7889999999998776610 112458888899998887632211 1111345667899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHH
Q 017672 199 ISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQV 278 (368)
Q Consensus 199 l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~ 278 (368)
+++.+.|..|.+.-|.. +.+ ++....-+.....+...++....+.+ ...+..| .-+..|+ .-.++..++.
T Consensus 144 l~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i~a~i~~~~~~~~-----~~~k~~~-~nil~G~-~w~ignl~~~ 213 (269)
T PF06800_consen 144 LISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLIGAFIFNLFSKKP-----FFEKKSW-KNILTGL-IWGIGNLFYL 213 (269)
T ss_pred HHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHHHHHHHhhccccc-----ccccchH-HhhHHHH-HHHHHHHHHH
Confidence 99999999999997663 333 36666666544444444444333111 1111222 3344454 3447888999
Q ss_pred HHHhccCcceeeecchhHHHHHHHHHHHHhcccccchh----HhHHHHHHHHHHH
Q 017672 279 WAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGS----VGGAVLLVGGLYS 329 (368)
Q Consensus 279 ~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~----~~G~~lii~gi~~ 329 (368)
.+.++.+.+.+=.+..+.++++.+.+.++++|+=+..+ ++|..+++.|.++
T Consensus 214 is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 214 ISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999877654 4688888877653
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.22 E-value=3.2e-11 Score=94.53 Aligned_cols=104 Identities=21% Similarity=0.311 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHH
Q 017672 49 VYRQAFASLALSPFAFFLESQ--NASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGL 126 (368)
Q Consensus 49 ~~r~~~~~l~l~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~ 126 (368)
.+|+.++.+++..+...+++. ..+..+.+.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 578999999888887764432 112223355666777788877688999999999999 58889999999999999999
Q ss_pred HhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 127 LRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 127 ~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
++|||++++ ++.+++++++|++++...
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhhh
Confidence 999999999 999999999999999873
No 39
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.18 E-value=8.3e-10 Score=101.56 Aligned_cols=137 Identities=13% Similarity=0.097 Sum_probs=114.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
...|.++.++++++|+...+..|...++ .++.... +-..++.+++.++...... ....++..+...+.+|+++..+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999998775 7887765 4455666677776654332 1223455565667888888889
Q ss_pred HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
.+.+|++++++.+++.++++.+++|+++.++++++++|+++.. +++|..+++.|++.....
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 999999999999999763
No 40
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.17 E-value=8.4e-10 Score=95.51 Aligned_cols=261 Identities=12% Similarity=0.098 Sum_probs=189.0
Q ss_pred CCCh--HHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhH
Q 017672 41 GMNP--FVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPA 118 (368)
Q Consensus 41 g~~~--~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~ 118 (368)
|+.| +.+++.++++-..+.++.....+ .+++.+++|. +..++.+. .+.+.+.+-++.|++-..-.++..+.-+
T Consensus 70 gfkp~GWylTlvQf~~Ysg~glie~~~~~-~k~r~iP~rt---Y~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKli 144 (367)
T KOG1582|consen 70 GFKPFGWYLTLVQFLVYSGFGLIELQLIQ-TKRRVIPWRT---YVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLI 144 (367)
T ss_pred cCcccchHHHHHHHHHHHhhhheEEEeec-ccceecchhH---hhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhh
Confidence 4553 56667777665544444332211 2222233444 44444443 4566677788888888777788888888
Q ss_pred HHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHH
Q 017672 119 ITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIM 198 (368)
Q Consensus 119 ~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 198 (368)
-+.+.+.++-+.|-++. ++.+..+..+|+++.++.+.+. +.+-+..|+.+.
T Consensus 145 PVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~~-----------------------sPNF~~~Gv~mI 195 (367)
T KOG1582|consen 145 PVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQT-----------------------SPNFNLIGVMMI 195 (367)
T ss_pred hhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhccccc-----------------------CCCcceeeHHHH
Confidence 88888888877776666 9999999999999998754321 445557899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhCC-CcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchh---hHHHHHHHHHHhhhHHH
Q 017672 199 ISANTAWSLWLVLQGYIIKQYP-AKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDI---HLVSVVYCGLVINGITY 274 (368)
Q Consensus 199 l~a~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~gi~~~~i~~ 274 (368)
-.|.++-|.-...+++..+..+ +..+..++...++.+.++.......+-.+.|..-..+ .....++.+. .+.++.
T Consensus 196 sgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~ 274 (367)
T KOG1582|consen 196 SGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGI 274 (367)
T ss_pred HHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhH
Confidence 9999999999999999888776 3457778888888888777776655444444322211 2233333333 555666
Q ss_pred HHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccccc
Q 017672 275 WIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNR 336 (368)
Q Consensus 275 ~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~ 336 (368)
......++..++..++.+...+..+++++++++|..++|....-|..+++.|+++-.+.|+.
T Consensus 275 ~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 275 VFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 67777788899999999999999999999999999999999999999999999998887743
No 41
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.13 E-value=1.2e-09 Score=100.39 Aligned_cols=138 Identities=13% Similarity=0.105 Sum_probs=115.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
...|.++.++++++|+......|...+. ++.....+++.++.+++.++............+...+..+...++++...
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999999999999986443 44566778888888888777654332211113467788888889888889
Q ss_pred HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.+.+|++++++.+++.++++.++.|++++++++++++|+++.. +++|..+++.|+.+...
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 99999999999999865
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.13 E-value=6.1e-10 Score=102.61 Aligned_cols=138 Identities=13% Similarity=0.160 Sum_probs=109.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc--ccchhhHHHHHHHHH
Q 017672 190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK--LGWDIHLVSVVYCGL 267 (368)
Q Consensus 190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi 267 (368)
+..+|++++++++++|+...+..|.. .+.+ |.+..++++.++.+.+.+...... +..... ..+...+ .....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence 45689999999999999999999875 5565 599999999999887776653332 111110 0112222 2334566
Q ss_pred HhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 268 VINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 268 ~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+...+.+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 6777889999999999999999999999999999999999999999999999999999988765
No 43
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.11 E-value=6.1e-08 Score=89.50 Aligned_cols=297 Identities=12% Similarity=0.055 Sum_probs=177.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCC--hHHHHHHHHHHHHHHHHHHH--hhhhc---cCCCCCCHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMN--PFVFVVYRQAFASLALSPFA--FFLES---QNASPLSYSSVCKIFL 84 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~--~~~~~~~r~~~~~l~l~~~~--~~~~~---~~~~~~~~~~~~~~~~ 84 (368)
+...|+++.+++.++||.++...|. .++ .+ .++.+ -..+.. ++.|+. ....+ ......+.+.+..-++
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~W~v--~gi~~w-l~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETMWSV--GGIFSW-LILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHHHHH--HHHHHH-HHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 4667999999999999999999998 443 34 22221 111111 111111 11111 1122234566776777
Q ss_pred HHHHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccc---cccccccccchhhHHHhHHhHHHHhhhc
Q 017672 85 VSLFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESI---SIKYLHGIAKVLGSVVSVSGALVFAFVK 160 (368)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~---~~~~~~~~~~~~gi~l~~~Gv~li~~~~ 160 (368)
.|++- ...+..++.++++.+.+.+..+.. +.-+...++..++++|=- +.. -...-.+|++++++|+++.....
T Consensus 79 ~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 79 FGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHhh
Confidence 77775 677779999999999999987665 888899999999888532 221 11125788999999999987622
Q ss_pred CCCCCCCCCChhhhhcccCCCCCC-CCCCchhHHHHHHHHHHHHHHHHHHH-------HHHHhh-hhCCCcchhHHHHHH
Q 017672 161 GPPLRFLNWYPEIQKQVSESSPTN-DCPIGRWIKGALIMISANTAWSLWLV-------LQGYII-KQYPAKVRLTTLQCF 231 (368)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~l~a~~~~a~~~~-------~~~~~~-~~~~~~~~~~~~~~~ 231 (368)
..+++ .+.. +..+.+..+|+++++++++.++.|.. ..+... ...+ +......+..
T Consensus 156 ~~k~~---------------~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~ 219 (345)
T PRK13499 156 QLKER---------------KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYV 219 (345)
T ss_pred hhccc---------------ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHH
Confidence 11100 0000 02346778999999999999999993 333211 1222 2333333333
Q ss_pred ---HHHHHH-HHHHHHh--h-cCCCcccc--cchhhHHHH----HHHHHHhhhHHHHHHHHHHhccCcceeee---cc-h
Q 017672 232 ---FSCIQS-AFWAVAA--E-RNPSAWKL--GWDIHLVSV----VYCGLVINGITYWIQVWAIEKKGPVFIAI---FT-P 294 (368)
Q Consensus 232 ---~~~~~~-~~~~~~~--~-~~~~~~~~--~~~~~~~~l----~~~gi~~~~i~~~l~~~a~~~~~a~~~~~---~~-~ 294 (368)
.+.++. .++.... . ++.+.... .++..+..- ++.|+ .=.+++.++..+.++.+...... +. .
T Consensus 220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~ 298 (345)
T PRK13499 220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMS 298 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence 232222 2222211 1 11111111 111112222 33333 44567778888888886655544 44 7
Q ss_pred hHHHHHHHHHHHHhccccc------chhHhHHHHHHHHHHHhhccc
Q 017672 295 FALIITAIFSAFLWKETLH------WGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 295 ~~pv~~~i~~~~~~~e~~~------~~~~~G~~lii~gi~~~~~~~ 334 (368)
+..+++.+.+.+ ++|.=+ ...++|.+++++|..+...++
T Consensus 299 ~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~ 343 (345)
T PRK13499 299 FYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLGN 343 (345)
T ss_pred HHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 778999999994 999765 566899999999988877654
No 44
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.08 E-value=1.5e-09 Score=89.91 Aligned_cols=138 Identities=15% Similarity=0.121 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhC------CCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc---cc------chhh
Q 017672 194 GALIMISANTAWSLWLVLQGYIIKQY------PAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK---LG------WDIH 258 (368)
Q Consensus 194 G~~~~l~a~~~~a~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~ 258 (368)
|.++++.+.++.|++.+..|+..++. .++.....+....+.+.+.+..+..|....... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988772 256889999999999999999888776531111 00 1123
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672 259 LVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW 332 (368)
Q Consensus 259 ~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~ 332 (368)
+..++..++ .....+...+..+++.+|...++...+..+..++++++++||++++.+++|.++.+.|++++.|
T Consensus 81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 334444444 4456677888999999999999999999999999999999999999999999999999988754
No 45
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.08 E-value=1.4e-08 Score=92.90 Aligned_cols=278 Identities=12% Similarity=0.126 Sum_probs=154.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT 91 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (368)
+...|+.++++++++-+....+-|....+ .+. .-.|- .++.++. .+ ....+.|...+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~--l~--~~~W~~G~~~~~ 61 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSY--LR--RPLWWIGLLLMV 61 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHH--Hh--hHHHHHHHHHHh
Confidence 45679999999999999999988877554 111 00000 0000010 11 122333444445
Q ss_pred HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCCh
Q 017672 92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYP 171 (368)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~ 171 (368)
.+..+.+.|+.+.|.+..+++..+.-++.++++..++|||++++ ++.|..+++.|..++... +++.+...+.+
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~~~t~~ 134 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEPIHTLD 134 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCCcCCHH
Confidence 66677889999999999999999999999999999999999999 999999999999988763 33222111111
Q ss_pred hhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH-------HHHHHHh
Q 017672 172 EIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS-------AFWAVAA 244 (368)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 244 (368)
+.... -.+.......... ..+...+.....+|..++ +.......-...+.... ..+....
T Consensus 135 ~l~~~----------~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~ 201 (300)
T PF05653_consen 135 ELIAL----------LSQPGFLVYFILV-LVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKLTF 201 (300)
T ss_pred HHHHH----------hcCcceehhHHHH-HHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHHHh
Confidence 11100 0011111111111 112222222222232222 11111111111111111 1111111
Q ss_pred hcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecch-hHHHHHHHHHHHHhcccc--cc----hhH
Q 017672 245 ERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAFLWKETL--HW----GSV 317 (368)
Q Consensus 245 ~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~~~~e~~--~~----~~~ 317 (368)
+++ +. ......| .++...+.+........++|+++.+++.+.++.+ .-...+++-+.++++|.. +. ...
T Consensus 202 ~g~-~~--f~~~~~y-~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~ 277 (300)
T PF05653_consen 202 SGD-NQ--FTYPLTY-LLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFL 277 (300)
T ss_pred cCc-hh--hhhhHHH-HHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHH
Confidence 111 11 1121223 3333334466677788889999999988887655 455667777777888754 44 345
Q ss_pred hHHHHHHHHHHHhhcccc
Q 017672 318 GGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 318 ~G~~lii~gi~~~~~~~~ 335 (368)
.|+.+++.|+++....|+
T Consensus 278 ~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 278 CGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred HHHHHHHHhhheeeccCc
Confidence 788888899888764433
No 46
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.05 E-value=1.7e-09 Score=97.52 Aligned_cols=136 Identities=14% Similarity=0.252 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCC---Ccccccchhh-HHHHHHHHHH
Q 017672 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNP---SAWKLGWDIH-LVSVVYCGLV 268 (368)
Q Consensus 193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~gi~ 268 (368)
+|.+++++++++|+...+..|. ..+.+ |.+..+++++++.+.+.++.....+.. ..++.....+ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999998 45565 499999999999887766553332110 0111111122 3334455553
Q ss_pred hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
..+.+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 66889999999999999999999999999999999999999999999999999999987664
No 47
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.05 E-value=3.6e-09 Score=96.77 Aligned_cols=133 Identities=10% Similarity=0.031 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHH
Q 017672 195 ALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITY 274 (368)
Q Consensus 195 ~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~ 274 (368)
.++.+++++++|...+..|+..++. ++. ..+....+.+...++..... ....++... ..++..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYL-AQVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhc-ccCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 4678999999999999999877763 322 35555555666666554321 112333222 334445555555777889
Q ss_pred HHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672 275 WIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW 332 (368)
Q Consensus 275 ~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~ 332 (368)
.++++++++.+++.++++.+++|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 48
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.03 E-value=8.6e-10 Score=91.08 Aligned_cols=210 Identities=15% Similarity=0.078 Sum_probs=151.0
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
.+.+.+|..+++..+++.++.+..+...|+.+++++++++|+... ++++.++++.|++++...+.
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN--------- 128 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN--------- 128 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc---------
Confidence 345559999999999999999999999999999999999999999 99999999999999975322
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHH-HHHHHHHHhhcC
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT--LQCFFSCI-QSAFWAVAAERN 247 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~ 247 (368)
...+...|+.+++.+++..|+|-+.-|+...+-+-.-...+ ..-++..+ ...+.....-..
T Consensus 129 ----------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~ 192 (290)
T KOG4314|consen 129 ----------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTG 192 (290)
T ss_pred ----------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence 44566899999999999999999999988765431011111 11111111 111111111112
Q ss_pred CCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHH
Q 017672 248 PSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGL 327 (368)
Q Consensus 248 ~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi 327 (368)
.++|+......|..+...+.+.. .-.++.+.++....|...++-......--...+.++-+-..+.....|..+|..|.
T Consensus 193 VE~~qsFA~~PWG~l~G~A~L~l-AFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 193 VEHLQSFAAAPWGCLCGAAGLSL-AFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred hHHHHHHhhCCchhhhhHHHHHH-HHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 23443333345666655555433 33457778888888888888877777788888888766677888899999999998
Q ss_pred HHhhc
Q 017672 328 YSVLW 332 (368)
Q Consensus 328 ~~~~~ 332 (368)
++...
T Consensus 272 iLiii 276 (290)
T KOG4314|consen 272 ILIII 276 (290)
T ss_pred Hheec
Confidence 77664
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.03 E-value=4.4e-09 Score=96.89 Aligned_cols=134 Identities=19% Similarity=0.224 Sum_probs=104.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
...|.+++++++++|+...+..|...++ .++....+ ....+.+.+........ ....+...+..++..++ ....
T Consensus 154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~-~t~~ 227 (295)
T PRK11689 154 NPLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAA-AMGF 227 (295)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHH-HHHH
Confidence 3468999999999999999999998765 77765432 22333333322222211 12345566766666664 4577
Q ss_pred HHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 93 SLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.+.+|++++++.+++.++.+.++.|++..++++++++|+++.. +++|.++++.|+.+...
T Consensus 228 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 228 GYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 8889999999999999999999999999999999999999999 99999999999988865
No 50
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.02 E-value=7.4e-09 Score=97.33 Aligned_cols=137 Identities=9% Similarity=0.105 Sum_probs=104.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHHHHHHHHhhhhccCC----CCCCHHHHHHHHHHHHH
Q 017672 14 QKPYIAMIFVQFAYAGMALFSKAAIAKGMNP-FVFVVYRQAFASLALSPFAFFLESQNA----SPLSYSSVCKIFLVSLF 88 (368)
Q Consensus 14 ~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~-~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 88 (368)
..|.+++++++++|+...++.|..... .++ ....++...++.+.+.+......+... ...+.. ....+..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 458899999999999999999987765 655 455666666666655554443322111 111222 2223334444
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
..+++.++++++++.+++.+++..++.|++++++++++++|+++.. +++|.++++.|+.++...
T Consensus 266 -t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 266 -TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMWG 329 (358)
T ss_pred -HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhh
Confidence 4567889999999999999999999999999999999999999999 999999999999998763
No 51
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.98 E-value=8.8e-10 Score=97.20 Aligned_cols=215 Identities=12% Similarity=0.009 Sum_probs=129.7
Q ss_pred hhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCC
Q 017672 107 TFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDC 186 (368)
Q Consensus 107 ~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (368)
.......+..++++++.++.+.+||.+.. ++++.++...|+......+.+......-...-...|.+++.....
T Consensus 5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~ 78 (222)
T TIGR00803 5 PIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTL 78 (222)
T ss_pred cchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccc
Confidence 34456667888888888888888888877 899999888888765432111000000000000000001100111
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchh-HHHHHHHHHHHHHHHHHHhhcC-CCcccccchhhHHHHHH
Q 017672 187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRL-TTLQCFFSCIQSAFWAVAAERN-PSAWKLGWDIHLVSVVY 264 (368)
Q Consensus 187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 264 (368)
..++...|....+.+.++.+...+.+++..++.+..... +....+.+.+...........+ ...+... ..+....+
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 156 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPTAVW 156 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCchHHH
Confidence 223556788888889998889999998876665431211 1111222222111111111111 0111100 11122222
Q ss_pred HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672 265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS 329 (368)
Q Consensus 265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~ 329 (368)
..++.+.++..+..+.+|+.++...+....++++++.+++++++||+++..++.|+.+++.|+++
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 23345567777889999999999999999999999999999999999999999999999998765
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.95 E-value=2.5e-08 Score=92.06 Aligned_cols=139 Identities=13% Similarity=0.255 Sum_probs=108.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCHHHHHHHHHHH
Q 017672 14 QKPYIAMIFVQFAYAGMALFSKAAIAKG--MNPFVFVVYRQAFASLALSPFAFFLESQ-----NASPLSYSSVCKIFLVS 86 (368)
Q Consensus 14 ~~~~~~~~l~~~~~~~~~~~~k~~~~~g--~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g 86 (368)
..|.+++++++++|+...+..|...++. .+.....++-.+.+.+.+.......+.. .+...+...+..++.++
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 4699999999999999999999876541 2223334444444443333332222211 11234567888889999
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
+++....+.+|+.++++.+++.++.+..+.|++..++++++++|+++.. +++|..++++|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999 99999999999998764
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.89 E-value=2.9e-08 Score=78.99 Aligned_cols=122 Identities=12% Similarity=0.063 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhH
Q 017672 193 KGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGI 272 (368)
Q Consensus 193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i 272 (368)
.|.++.+.+.++-+...++.|+..++.++ ...... . . ..... . . .....+++|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~-~--~-----------~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLA-F--G-----------LALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHH-H--h-----------ccHHHHHHHHHHHHH
Confidence 47888999999999999999998887653 322111 0 0 00001 0 0 012357888899999
Q ss_pred HHHHHHHHHhccCcceeeecchhHHHHHHHHHHH--HhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAF--LWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~--~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
++.+|.+++++.+++.+..+....+++..+.++. ++||++|+.+++|+++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888885 79999999999999999999999875433
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.86 E-value=1.8e-08 Score=93.20 Aligned_cols=140 Identities=14% Similarity=0.238 Sum_probs=107.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCCCC---------CCH-HHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNASP---------LSY-SSVCK 81 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~-~~~~~ 81 (368)
+..|.++.++++++|+...+..|...++ +.+|..+.++.+..+.+.++|+....+...... ... ..+..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 4569999999999999999999998761 389999999999999999998876543211000 000 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.+..+.......+.+++.+++++++..+++...+.|+++.++++++++|+++.. +++|..+++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 222222222333357778999999999999999999999999999999999999 99999999999999865
No 55
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.79 E-value=2.2e-08 Score=78.42 Aligned_cols=107 Identities=18% Similarity=0.269 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHH
Q 017672 228 LQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFL 307 (368)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~ 307 (368)
++...+.+....+.....+..+.++......+...+..|++....++.++.+++++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 45556666665555442221111222222455666677776767899999999999995 88899999999999999999
Q ss_pred hcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 308 WKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 308 ~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
++|+++..+++|++++++|+.+..+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999887544
No 56
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.67 E-value=6.5e-07 Score=73.95 Aligned_cols=133 Identities=20% Similarity=0.296 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhhccCCCC----C-------CHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAK------GMNPFVFVVYRQAFASLALSPFAFFLESQNASP----L-------SYSS 78 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~ 78 (368)
|.++++.+.++-+...+..|...++ ..++..+..+....+.+++++.....+.....+ . +.+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5788999999999999999987755 689999999999999999999887766533111 0 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 79 VCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 79 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
+..++..|+++ ...+...+..++++++...++......+.+.++++++++|+++.. ++.|+.++++|+.+
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 55556666665 455558889999999999999999999999999999999999999 99999999999875
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.66 E-value=6.4e-07 Score=84.41 Aligned_cols=139 Identities=13% Similarity=0.186 Sum_probs=101.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHhhhhccCC-----------CCCC
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAK------GMNPFVFVVYRQAFASLALSPFAFFLESQNA-----------SPLS 75 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~------g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~-----------~~~~ 75 (368)
+..|.+++++++++|+...+..|...++ ..++.....+-...++++++|+....+.... ....
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4679999999999999999999998764 1557767777788888888888764321100 0001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 76 YSSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
.......++.+.+.....+.+.+.+++++++..+++...+.|+++.++++++++|+++.. +++|..+++.|+.+
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 111111222222222222333446999999999999999999999999999999999999 99999999999988
Q ss_pred Hh
Q 017672 156 FA 157 (368)
Q Consensus 156 i~ 157 (368)
..
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 64
No 58
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.62 E-value=1.1e-06 Score=80.19 Aligned_cols=135 Identities=20% Similarity=0.263 Sum_probs=108.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVV-YRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT 91 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (368)
...|.++.++++++|+...+..|... + .++..... +.+........+... ...+ .+...+.+......|+++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFL-SGFG--APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999876 4 66666666 444422222222222 1111 23457788888999988877
Q ss_pred HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
..+.+++++++..+++..+.+..+.|++..++++++++|+++.. +++|..+.+.|+.+...
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHhc
Confidence 78989999999999999999999999999999999999999999 99999999999999864
No 59
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.8e-08 Score=85.19 Aligned_cols=277 Identities=14% Similarity=0.074 Sum_probs=183.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN 95 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (368)
.++.+++-++.||..+.+.-.. |-.|-+....-.+-+.++-+.+.+. . .|..+.+.+..-++.|++- ...+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~---~p~~T~~~~iv~~isG~~W-s~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-V---SPELTLTIFIVGFISGAFW-SFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-e---cCccchhhHHHHHHhhhHh-hhhhh
Confidence 5788999999999988876533 5677776655554444444444333 2 3444566666666666664 67777
Q ss_pred HHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhh
Q 017672 96 LYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQ 174 (368)
Q Consensus 96 ~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 174 (368)
..+.|+++.+++.+.++.. +.-+-+.+++.++++|=-+..+ -....+++++.++|+.+-... ++
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~--~IlG~iAliliviG~~lTs~~-~~------------ 139 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ--IILGFIALILIVIGIYLTSKQ-DR------------ 139 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh--HHHHHHHHHHHHHhheEeeee-cc------------
Confidence 9999999999999998887 7777788889999998655551 011134555666666665442 11
Q ss_pred hcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 017672 175 KQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLG 254 (368)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (368)
.+..++..++..+|....+.+.+.|-.|.+..+... .+. ++...-+..-..+..+.+. ....+. ..
T Consensus 140 ------~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g-~saiLPqAiGMv~~ali~~-~~~~~~----~~ 205 (288)
T COG4975 140 ------NNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDG-LSAILPQAIGMVIGALILG-FFKMEK----RF 205 (288)
T ss_pred ------ccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccc-hhhhhHHHHHHHHHHHHHh-hccccc----ch
Confidence 111222456678899999999999999999876653 222 4444444333333333333 222111 11
Q ss_pred chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhH----hHHHHHHHHHHHh
Q 017672 255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSV----GGAVLLVGGLYSV 330 (368)
Q Consensus 255 ~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~gi~~~ 330 (368)
+ ...+..+..|. .=.++...+..+.++.+.+..=.+..+..+++.+-+.++++|+=|..++ +|.+++++|..+.
T Consensus 206 ~-K~t~~nii~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 206 N-KYTWLNIIPGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred H-HHHHHHHhhHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 2 22233344454 3347888999999999999999999999999999999999999887764 6788888876654
Q ss_pred h
Q 017672 331 L 331 (368)
Q Consensus 331 ~ 331 (368)
.
T Consensus 284 g 284 (288)
T COG4975 284 G 284 (288)
T ss_pred h
Confidence 3
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.58 E-value=9.2e-07 Score=68.68 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 82 IFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
....+.++...++.++..+++..|.+.+..+.++.++++.+++++++|||++.+ +++|+.++++|++++.
T Consensus 39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 334445667788899999999999999999999999999999999999999999 9999999999999885
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.54 E-value=1.3e-06 Score=80.08 Aligned_cols=130 Identities=9% Similarity=0.066 Sum_probs=102.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH----HHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQA----FASLALSPFAFFLESQNASPLSYSSVCKIFLVSLF 88 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 88 (368)
.++|+++.+++++.++......|.. + .+|....+.... .+.+++.++ + + .++. ..+..+..++.|++
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~~~-~~~~~~~~~~~Gi~ 220 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AKPL-KKYAILLNILPGLM 220 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH---h-c-ccch-HHHHHHHHHHHHHH
Confidence 3789999999999999999999975 2 788888555554 333333332 1 1 1221 23444455668888
Q ss_pred HHHHHHHHHHHhcc-ccChhhhhhcccchhHHHHHHHHHHhcccccccccccccch----hhHHHhHHhHHHHhh
Q 017672 89 GLTLSLNLYYVAIN-YTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKV----LGSVVSVSGALVFAF 158 (368)
Q Consensus 89 ~~~~~~~~~~~al~-~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~----~gi~l~~~Gv~li~~ 158 (368)
....+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.+++ ++ +|.++.+.|+.++..
T Consensus 221 -~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 221 -WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILGI 288 (290)
T ss_pred -HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHhc
Confidence 4788889999999 999999999999999999999999999999999 99 999999999998753
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.53 E-value=7e-07 Score=79.01 Aligned_cols=143 Identities=16% Similarity=0.232 Sum_probs=115.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCccc-ccchhhHHHHHHHHHH
Q 017672 190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWK-LGWDIHLVSVVYCGLV 268 (368)
Q Consensus 190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~ 268 (368)
+...|+++++.|-+.|+..-...|-. +..++ .++..++.+.+.+..........+..+-+. ...+..+......+.+
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~-~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLPA-TEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH-ccCCH-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 34689999999999999999888775 55554 899999999999988877766554433222 2233456666666664
Q ss_pred hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
. .....++.+++.......++.-++++|.+.+++|.++++|+++..|++..++..+|+....+...
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 4 48899999999999999999999999999999999999999999999999999999888766443
No 63
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.50 E-value=1.3e-06 Score=75.34 Aligned_cols=138 Identities=12% Similarity=0.019 Sum_probs=118.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLT 91 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (368)
-...|..+++.+..+|+.+.+..|.+-+. .+.-.-+..-+++++++.+|+-......... ++.-...-+..++++..
T Consensus 145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~--~p~ll~laLgvavlSSa 221 (292)
T COG5006 145 LDPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPALF--SPSLLPLALGVAVLSSA 221 (292)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchhhc--ChHHHHHHHHHHHHhcc
Confidence 45679999999999999999999988754 6666778889999999999987754433222 35666666788888888
Q ss_pred HHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 92 LSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 92 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
..+.+-..+++..|....+++.++.|.+.++.++++++|+++.. ||+++..++.+.+-.++
T Consensus 222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL 282 (292)
T ss_pred cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence 89999999999999999999999999999999999999999999 99999999988876654
No 64
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.46 E-value=3.2e-06 Score=67.31 Aligned_cols=119 Identities=20% Similarity=0.201 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017672 15 KPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSL 94 (368)
Q Consensus 15 ~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (368)
.++++++++.++-+...++.|...++ ......... .. . ..... . .| ...+..|+.....++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~~-~----~~~~~---~--~p-------~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-FI-A----ALLAF---G--LA-------LRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-HH-H----HHHHH---h--cc-------HHHHHHHHHHHHHHH
Confidence 47888999999999999999998876 443332211 10 0 00000 0 01 125667777888899
Q ss_pred HHHHHhccccChhhhhhcccchhHHHHHHHHH--HhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 95 NLYYVAINYTTATFAAATTNTIPAITFVLAGL--LRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 95 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~--~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.++..+++..|++.+..+.+..+.++.+.++. +++|+++.. +++|+.++++|+.++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998888888874 899999999 99999999999999864
No 65
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.45 E-value=1.4e-06 Score=67.72 Aligned_cols=67 Identities=12% Similarity=0.216 Sum_probs=61.5
Q ss_pred HHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 265 CGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 265 ~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
.++++.++++.++.+++++.+.+++-.+.++.++++.+.++++|||++++.+++|.+++++|+.+..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445667899999999999999999999999999999999999999999999999999999988764
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.28 E-value=1.3e-05 Score=74.32 Aligned_cols=141 Identities=13% Similarity=0.109 Sum_probs=111.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--HHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLS--YSSVCKIFLVSLF 88 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~ 88 (368)
.+..+|-++++++++++|..++.-+...++ .++.++..+-.+++.++..+.....++......+ .+... +++...+
T Consensus 164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~-~~v~~~~ 241 (334)
T PF06027_consen 164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIG-LLVGYAL 241 (334)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHH-HHHHHHH
Confidence 467899999999999999999999999887 8999998888888888888777655554444332 33332 2222233
Q ss_pred HHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 89 GLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
+....+.+.-..+++++++...+-.-+..+++.++..+++|+++++. .++|.+++++|.++....
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEcc
Confidence 34455556677888999988888778889999999999999999999 999999999999998763
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.21 E-value=3.8e-06 Score=75.22 Aligned_cols=275 Identities=12% Similarity=0.103 Sum_probs=159.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (368)
.++.+|..+++.+.++-|...++-|....+ ... ...| ......+. .++ +....|.+.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~r--------------a~~gg~~y--l~~--~~Ww~G~ltm 74 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGLR--------------AGEGGYGY--LKE--PLWWAGMLTM 74 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hccc--------------ccCCCcch--hhh--HHHHHHHHHH
Confidence 356678888999999999999998887665 111 1111 11111121 122 3334566666
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY 170 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~ 170 (368)
...-..-|.|..+.|++..+++.++..+..++++..++||+++.. ..+|..++++|-.++... +++.+...+.
T Consensus 75 ~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~h-aP~e~~i~t~ 147 (335)
T KOG2922|consen 75 IVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIH-APKEQEIESV 147 (335)
T ss_pred HHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEe-cCcccccccH
Confidence 777778889999999999999999999999999999999999999 999999999999998873 4332211111
Q ss_pred hhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHH----------HHH
Q 017672 171 PEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQS----------AFW 240 (368)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 240 (368)
.+-.+- ..+... .+++.+-.....+-....|.. ....+ ...+..+.+.+.. ..+
T Consensus 148 ~el~~~---------~~~~~F---liy~~~iil~~~il~~~~~p~-~g~tn---ilvyi~i~s~iGS~tV~svKalg~ai 211 (335)
T KOG2922|consen 148 EEVWEL---------ATEPGF---LVYVIIIILIVLILIFFYAPR-YGQTN---ILVYIGICSLIGSLTVMSVKALGIAI 211 (335)
T ss_pred HHHHHH---------hcCccH---HHHHHHHHHHHHHHheeeccc-ccccc---eeehhhHhhhhcceeeeeHHHHHHHH
Confidence 110000 001111 111111111222222222211 11112 2223333333311 111
Q ss_pred HHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecch-hHHHHHHHHHHHHhccccc------
Q 017672 241 AVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAFLWKETLH------ 313 (368)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~~~~e~~~------ 313 (368)
-.-..++.+ ...+..|..++... .+.....--.++|++..+++.++.+.+ +-..++++-+.++|.|.-.
T Consensus 212 klt~~g~~q---l~~~~ty~~~l~~~-~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 212 KLTFSGNNQ---LFYPLTWIFLLVVA-TCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHHhcCCcc---cccHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 111222221 12223344433333 355566777789999999887777554 4566778888889987532
Q ss_pred chhHhHHHHHHHHHHHhhccc
Q 017672 314 WGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 314 ~~~~~G~~lii~gi~~~~~~~ 334 (368)
.....|+..++.|+.+....|
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHHhHHHhhheeeEeeeec
Confidence 235688999999988875433
No 68
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.09 E-value=1.3e-06 Score=75.91 Aligned_cols=138 Identities=10% Similarity=0.052 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHh
Q 017672 190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVI 269 (368)
Q Consensus 190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ 269 (368)
...+|.++...+ ..+...++..++...+ + |......++..-.+...+..+..... .+......- ++++=|+.+
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~-~-p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~--~LiLRg~mG 107 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN-D-PMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRK--WLILRGFMG 107 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc-C-hhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEE--EEEeehhhh
Confidence 346788888888 7777788888776655 3 36666666555555444443322222 111111111 223334433
Q ss_pred hhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 270 NGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 270 ~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
..+..+++|++++.+-+.+..+....|+++.+++|.+++|+.|....+|..+.+.|+++..+...
T Consensus 108 -~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 108 -FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred -hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 35667899999999999999999999999999999999999999999999999999999886543
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.94 E-value=3e-05 Score=60.64 Aligned_cols=69 Identities=22% Similarity=0.373 Sum_probs=57.5
Q ss_pred HHHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672 266 GLVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 266 gi~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~ 334 (368)
.+++.+++++++..++|+++.+.+=.+ ..+..+.+.+.++++|||++++.+++|.++|++|++......
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344556889999999999988665544 467888999999999999999999999999999998875433
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.91 E-value=0.00014 Score=58.81 Aligned_cols=132 Identities=14% Similarity=0.144 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672 194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT 273 (368)
Q Consensus 194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~ 273 (368)
..++++.++.+-++...+..++.++..+|+...+..+..+.+....+....++. ......+.+|+ .+.|.+.+++.
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w--~~lGG~lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWW--AYLGGLLGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChH--HhccHHHHHHH
Confidence 467889999999999999999988887669999999999999988888776553 22211222232 33355566677
Q ss_pred HHHHHHHHhccCcceeee-cchhHHHHHHHHHHH-H---hcccccchhHhHHHHHHHHHHH
Q 017672 274 YWIQVWAIEKKGPVFIAI-FTPFALIITAIFSAF-L---WKETLHWGSVGGAVLLVGGLYS 329 (368)
Q Consensus 274 ~~l~~~a~~~~~a~~~~~-~~~~~pv~~~i~~~~-~---~~e~~~~~~~~G~~lii~gi~~ 329 (368)
..+..+.+++++++.... ...-+.+.+++++.+ . -.+++++.+++|.+++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 778889999999877665 455567777888876 2 2468899999999999999863
No 71
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.91 E-value=0.00012 Score=65.21 Aligned_cols=135 Identities=15% Similarity=0.108 Sum_probs=92.3
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHH
Q 017672 10 FTASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFG 89 (368)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (368)
..+..++++.++++++.+.....+.|.. +.++....+-...--.+.-+.+....+++. ..|..++-++.|++-
T Consensus 133 ~~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~----~~k~~~~nil~G~~w 205 (269)
T PF06800_consen 133 KSNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKKPF----FEKKSWKNILTGLIW 205 (269)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccccc----cccchHHhhHHHHHH
Confidence 3456789999999999999999998873 377777665443333332333333222211 123444556666664
Q ss_pred HHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHH
Q 017672 90 LTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGAL 154 (368)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~ 154 (368)
...+.+++.+.+..+.+.+-.+.++.++...+-+.+++||+-+++ --....+|+++.++|.+
T Consensus 206 -~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k--e~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 206 -GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK--EMIYTLIGLILIVIGAI 267 (269)
T ss_pred -HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh--hHHHHHHHHHHHHHhhh
Confidence 566668999999999999999999999999999999999996666 22233445555555554
No 72
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.88 E-value=0.00017 Score=66.61 Aligned_cols=128 Identities=13% Similarity=0.037 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHhhhhCC-C--cchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHHH
Q 017672 204 AWSLWLVLQGYIIKQYP-A--KVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVWA 280 (368)
Q Consensus 204 ~~a~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~a 280 (368)
++..+.+.+++..++.. . +..+++.++....+...+.......+. .....+...+..++ ...++..+.+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRKIPLKKYAILSF-LFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-----CCcChHHHHHHHHH-HHHHHHHHHHHH
Confidence 34446677777766533 2 567888888888887776664443111 11122333444444 555777899999
Q ss_pred HhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672 281 IEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 281 ~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
+++++.....+.....|+.+++++.++++++.+..+++++.++.+|+.+....+.++
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~ 141 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSS 141 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccc
Confidence 999999999999999999999999999999999999999999999999887655443
No 73
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.73 E-value=9.9e-05 Score=67.76 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=87.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHH
Q 017672 189 GRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLV 268 (368)
Q Consensus 189 ~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 268 (368)
.+...|.++++.++++.+....++|+...+.+. .....-.. ... . ...+.|+. |..
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~~--------~~~--------~---l~~~~W~~----G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGSG--------GRS--------Y---LRRPLWWI----GLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccch--------hhH--------H---HhhHHHHH----HHH
Confidence 355789999999999999999999997665432 11100000 000 0 00011221 222
Q ss_pred hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672 269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
..+++..+...++...+++.++++..+..++..+++.++++|+++..++.|+++++.|..+....
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 33456667778999999999999999999999999999999999999999999999998776543
No 74
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.72 E-value=6.5e-05 Score=57.76 Aligned_cols=110 Identities=13% Similarity=0.106 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017672 21 IFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLNLYYVA 100 (368)
Q Consensus 21 ~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (368)
++.+++||.++++.|...+. .++..-.. |..-.... +. . +++....++ + ...+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-Ll----------~--n~~y~ipf~----l-Nq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-LL----------L--NPKYIIPFL----L-NQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-HH----------H--hHHHHHHHH----H-HHHHHHHHHHH
Confidence 35678999999999998875 55444331 32211111 00 0 123222222 3 34556688999
Q ss_pred ccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672 101 INYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 101 l~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
+...+.+.+.++. ++.=++|++.++++.+|..+++ .++|+.+++.|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999885 7899999999998888887888 999999999998764
No 75
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.66 E-value=0.014 Score=53.54 Aligned_cols=301 Identities=12% Similarity=0.074 Sum_probs=170.7
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhh-hccC----CCCCCHHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFL-ESQN----ASPLSYSSVCKIFLVS 86 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~-~~~~----~~~~~~~~~~~~~~~g 86 (368)
....|+++..++.++-|...+..|...+ .+--..=....+++. +.+|+.... .-+. ....+........+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 3567999999999999999999997633 553333233333333 334443211 1111 1122345566667777
Q ss_pred HHHHHHHHHHHHHhccccChhhhh-hcccchhHHHHHHHHHHhccccc-ccccccccchhhHHHhHHhHHHHhhhcCCCC
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAA-ATTNTIPAITFVLAGLLRIESIS-IKYLHGIAKVLGSVVSVSGALVFAFVKGPPL 164 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~~~e~~~-~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~ 164 (368)
++- ......|-.+++|+..+... +...+.-++-.++-.++.++--. ...+-....++|++++++|+.++......++
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 775 44555888999999988766 44456667777776665432100 0011123378999999999999976322111
Q ss_pred CCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-------hhCCCcch----hHHHHHHHH
Q 017672 165 RFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYII-------KQYPAKVR----LTTLQCFFS 233 (368)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~ 233 (368)
+ +...+..+.+..+|++.++.++++.|.++.-..... +...+|+. .....+.-+
T Consensus 160 ~---------------~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GG 224 (344)
T PF06379_consen 160 K---------------ELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGG 224 (344)
T ss_pred h---------------hhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhH
Confidence 1 001112345677999999999999999887653211 11111121 223334445
Q ss_pred HHHHHHHHHHhhc---CCC---cccccc---hhhHHHHHHHHHHhhhHHHHHHHHHHhccCcc----eeeecchhHHHHH
Q 017672 234 CIQSAFWAVAAER---NPS---AWKLGW---DIHLVSVVYCGLVINGITYWIQVWAIEKKGPV----FIAIFTPFALIIT 300 (368)
Q Consensus 234 ~~~~~~~~~~~~~---~~~---~~~~~~---~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~----~~~~~~~~~pv~~ 300 (368)
.+.-+.+++.... +.+ +..... ..+....++.|+ .=..++++|..+-.++++. --.+.+.+..+++
T Consensus 225 f~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~s 303 (344)
T PF06379_consen 225 FITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFS 303 (344)
T ss_pred HHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHH
Confidence 5555666544321 111 111111 122233333333 2234566666777777743 2334677778888
Q ss_pred HHHHHHHhcc------cccchhHhHHHHHHHHHHHhhcc
Q 017672 301 AIFSAFLWKE------TLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 301 ~i~~~~~~~e------~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
-+.+.+ ++| +.-..-++|+++++.++.++-++
T Consensus 304 nvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 304 NVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 888876 665 34445678999998888776544
No 76
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.65 E-value=0.00066 Score=54.87 Aligned_cols=139 Identities=13% Similarity=0.140 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhh
Q 017672 192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVING 271 (368)
Q Consensus 192 ~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~ 271 (368)
....++++.++.+-.+..-...++.+..++|....+..+..+.+.+..+.+..+.. ..+....+..|+. +.|.+..+
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~--~~GG~lGa 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWA--WIGGLLGA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHH--HHccchhh
Confidence 56788999999999999999999988888779999999999999888877664332 2222222223332 22323333
Q ss_pred HHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhc----ccccchhHhHHHHHHHHHHHhhcc
Q 017672 272 ITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWK----ETLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 272 i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~----e~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
+-...-....++.+++. ......-+.+.+++++-+=+. .+++...++|++++++|+++..+.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 44445556677777754 444666777788888877654 578999999999999996665543
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.64 E-value=0.0002 Score=55.24 Aligned_cols=67 Identities=9% Similarity=0.228 Sum_probs=55.3
Q ss_pred HHhhhHHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672 267 LVINGITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 267 i~~~~i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
+++.+++++++..++++++.+.+=.+ ..+..+.+.+.++++|||++++.+++|+++|++|++.....
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34556788889999999887655443 45678888999999999999999999999999999988543
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.52 E-value=0.00026 Score=55.41 Aligned_cols=68 Identities=22% Similarity=0.161 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 85 VSLFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
..+.....++.++..++++.|.+.+-.+. ...-+.+.+++.++++|++++. +++|+.++++|++++-.
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 34455677888999999999999998876 5889999999999999999999 99999999999999854
No 79
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.00031 Score=53.10 Aligned_cols=65 Identities=26% Similarity=0.229 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
+.++..++.+.-.++++.|.+.+-.+. ..-.+.+++.++++++|+++.. +++++.+.++|++.+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 445677888999999999999887655 4888899999999999999999 9999999999999884
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.48 E-value=0.002 Score=52.03 Aligned_cols=130 Identities=14% Similarity=0.148 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672 17 YIAMIFVQFAYAGMALFSKAAIAKGMN-PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN 95 (368)
Q Consensus 17 ~~~~~l~~~~~~~~~~~~k~~~~~g~~-~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (368)
.++++++..+-+....+.-.+.++ .+ |+.-+++.+..+.+.+..+....+++..+..+.-.|+ ...-|+++ .....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG-~~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLG-VFFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHH-HHHHH
Confidence 567788888888888888888877 65 9999999999999999888877665433322212222 23355555 55555
Q ss_pred HHHHhccccChhhhhhcccchhHHHHHHHHH-----HhcccccccccccccchhhHHHhHHhHHH
Q 017672 96 LYYVAINYTTATFAAATTNTIPAITFVLAGL-----LRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 96 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~-----~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
+........+++.+..+.-+.-+...++-=- .-|++++.+ +.+|+++.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 7778889999998887776666655555422 356777777 99999999999864
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.43 E-value=0.00048 Score=53.13 Aligned_cols=67 Identities=15% Similarity=0.175 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 86 SLFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.+.+...++.++..+++..|.+.+-.+. ...-+.+.++++++++|++++. +++|+.++++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 3455677888889999999999998775 4788899999999999999999 99999999999999854
No 82
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.38 E-value=0.00051 Score=62.98 Aligned_cols=139 Identities=17% Similarity=0.277 Sum_probs=111.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh---cCCChHHHHHHHHHHHHHHHH-HHHhhhhccCC---C--CCCHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIA---KGMNPFVFVVYRQAFASLALS-PFAFFLESQNA---S--PLSYSSVCKI 82 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~---~g~~~~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~ 82 (368)
=+..|..+++.+.+..+...++.|.... +.++++....+..-++..+++ |+....+.... . ..+.. ....
T Consensus 160 fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (316)
T KOG1441|consen 160 FNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLIL 238 (316)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHH
Confidence 4678999999999999999999999883 248999999998889999888 88776554332 1 11223 3333
Q ss_pred HHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 83 FLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 83 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
...+++.... +...|..+..+++-..++...+.-.++...++++++|++++. +..|.+++++|+.+-..
T Consensus 239 ~~~sv~~f~~-Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 239 LLNSVLAFLL-NLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHH-HHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHHH
Confidence 4444555444 457888999999999999999998889999999999999999 99999999999998754
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.35 E-value=0.0021 Score=49.34 Aligned_cols=64 Identities=17% Similarity=0.098 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
..+...++.+...++++.|.+.+-.+.. ...+.+.+.+.+++||++++. +++|+.+++.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 3445677888899999999998886655 888899999999999999999 999999999999986
No 84
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.34 E-value=0.00058 Score=51.65 Aligned_cols=65 Identities=22% Similarity=0.350 Sum_probs=54.8
Q ss_pred hhhHHHHHHHHHHhccCcc-eeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcc
Q 017672 269 INGITYWIQVWAIEKKGPV-FIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~-~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~ 333 (368)
+..++|.+...++|+++.. -.++-.-...+.+.+.++++|+|+.++.+++|.+++++|+......
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4457889999999998864 3456667778889999999999999999999999999999887653
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.26 E-value=0.00084 Score=51.28 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=54.6
Q ss_pred HHhhhHHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 267 LVINGITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 267 i~~~~i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+++..++++++..++|+++... .++-.-+..+.+.+.++++|||++++.+++|..++++|++...
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3355688999999999988754 3445557888999999999999999999999999999998764
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.24 E-value=0.0011 Score=50.56 Aligned_cols=65 Identities=18% Similarity=0.082 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
+.+...++.+...+++..|.+.+-.+.. ...+.+.+++.+++||++++. +++++.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 4456778888999999999998886665 888999999999999999999 9999999999999883
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.16 E-value=0.015 Score=54.11 Aligned_cols=147 Identities=15% Similarity=0.050 Sum_probs=94.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHHH-------HHHHHHHhcCCChHHHHHHHHH---HHHHH-HHHHHhhh--hccCCC----
Q 017672 10 FTASQKPYIAMIFVQFAYAGMA-------LFSKAAIAKGMNPFVFVVYRQA---FASLA-LSPFAFFL--ESQNAS---- 72 (368)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~-------~~~k~~~~~g~~~~~~~~~r~~---~~~l~-l~~~~~~~--~~~~~~---- 72 (368)
..+..||++.++++.+..+..+ +..+.+.+.|.++.....-.+. ++..+ -+.++... +.+..+
T Consensus 169 ~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~ 248 (345)
T PRK13499 169 EFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKAD 248 (345)
T ss_pred ccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchh
Confidence 3567899999999999999998 6777665567787766655554 33332 22333321 111111
Q ss_pred C-CCHHHHHHH----HHHHHHHHHHHHHHHHHhccccChhhhhh---cc-cchhHHHHHHHHHHhcccccccccccccch
Q 017672 73 P-LSYSSVCKI----FLVSLFGLTLSLNLYYVAINYTTATFAAA---TT-NTIPAITFVLAGLLRIESISIKYLHGIAKV 143 (368)
Q Consensus 73 ~-~~~~~~~~~----~~~g~~~~~~~~~~~~~al~~~~~~~~~~---i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~ 143 (368)
+ .+++.+.+- .+.|++- ...+.+|..+-...+.+.+.. +. ++..++..+-+. ++||+-+..||..+..+
T Consensus 249 ~~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~ 326 (345)
T PRK13499 249 FSLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLS 326 (345)
T ss_pred ccccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHH
Confidence 1 111222333 4444443 555667777777775554444 55 555566666666 69999887788889999
Q ss_pred hhHHHhHHhHHHHhh
Q 017672 144 LGSVVSVSGALVFAF 158 (368)
Q Consensus 144 ~gi~l~~~Gv~li~~ 158 (368)
+|+++.++|+.++..
T Consensus 327 ~G~vliI~g~~lig~ 341 (345)
T PRK13499 327 LGCVVIILAANIVGL 341 (345)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999865
No 88
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.15 E-value=0.0014 Score=50.42 Aligned_cols=63 Identities=17% Similarity=0.158 Sum_probs=52.9
Q ss_pred hhhHHHHHHHHHHhccCcce-eeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 269 INGITYWIQVWAIEKKGPVF-IAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~~-~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
+..+++++...++|+++... .++-..+..+.+.+.++++|||++++.+++|.++++.|+....
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 44678899999999988744 3445567778889999999999999999999999999988753
No 89
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.05 E-value=0.0016 Score=58.04 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672 258 HLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 258 ~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
+.+....-++ .-.++..+.+.++++.+|+...++..+..+++.++++++++.+++..||++..+++.|+.+........
T Consensus 16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3344444444 345778899999999999999999999999999999999999999999999999999999887655443
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.92 E-value=0.011 Score=52.54 Aligned_cols=192 Identities=16% Similarity=0.077 Sum_probs=116.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN 95 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (368)
|++..+++.+++|.+++-.|.- +. -|++.+.++......+.-+.+...++. ++. +..-++-|.+ .+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~f----~p~amlgG~l-W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---PPF----YPWAMLGGAL-WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---Ccc----eeHHHhhhhh-hhcCce
Confidence 5678899999999999999965 44 588888888777666666655554332 221 2223333444 455666
Q ss_pred HHHHhccccChhhhhhcccchhHHHHHHH-HH-HhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCC---
Q 017672 96 LYYVAINYTTATFAAATTNTIPAITFVLA-GL-LRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWY--- 170 (368)
Q Consensus 96 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~-~~-~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~--- 170 (368)
+-.-.++..+.+....+.++.-+.+.-.. .+ +++++.... ...+..++|++++++|..+...-+.+..+..++.
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 77888999999999988887555554443 22 454433222 2345578999999999988866333321110000
Q ss_pred ---hh---hhhcccCCC-CCCC----CCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017672 171 ---PE---IQKQVSESS-PTND----CPIGRWIKGALIMISANTAWSLWLVLQGYIIKQ 218 (368)
Q Consensus 171 ---~~---~~~~~~~~~-~~~~----~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~ 218 (368)
.+ ..++++..+ +++. ...++...|..++++++++|+...+=.....++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 00 000110000 1110 112246789999999999999988777776444
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.82 E-value=0.01 Score=45.70 Aligned_cols=108 Identities=11% Similarity=0.047 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHHHHHHHH
Q 017672 200 SANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGITYWIQVW 279 (368)
Q Consensus 200 ~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~~~l~~~ 279 (368)
+-+++|+..+-+.||..+..++ ..-.. +..-... . ++. .|-. .+....+..+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~-~~~~~-~~~~~~~-~----Ll~-------------n~~y--~ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEK-VKASL-QLLQEIK-F----LLL-------------NPKY--IIPFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCC-ccchH-HHHHHHH-H----HHH-------------hHHH--HHHHHHHHHHHHHHHH
Confidence 4578999999999999887664 22221 2111111 1 110 1111 1133344566778899
Q ss_pred HHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHH
Q 017672 280 AIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYS 329 (368)
Q Consensus 280 a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~ 329 (368)
.+.+.+-+.+.++ +.+.-+++++.++++.+|..++..++|+++++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 9999999999998 5999999999999888888899999999999999765
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.80 E-value=0.0021 Score=48.09 Aligned_cols=56 Identities=20% Similarity=0.344 Sum_probs=34.3
Q ss_pred HhhhHHHHHHHHHHhccCccee-eecchhHHHHHHHHHHHHhcccccchhHhHHHHH
Q 017672 268 VINGITYWIQVWAIEKKGPVFI-AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLL 323 (368)
Q Consensus 268 ~~~~i~~~l~~~a~~~~~a~~~-~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~li 323 (368)
.+..+++.++..++|+.+.+.+ ++...+..+.+.+.+.++|||++|+.+++|..+|
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3556888999999999998777 4455688999999999999999999999999886
No 93
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.74 E-value=0.0029 Score=47.41 Aligned_cols=57 Identities=21% Similarity=0.123 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhcc-cchhHHHHHHHHHHhcccccccccccccchhhHHHh
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATT-NTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVS 149 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~ 149 (368)
+.+...++.++..++++.|.+.+-.+. .+..+.+.+++.++++|+++.. |++|+.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheeeC
Confidence 445677888999999999999997665 5999999999999999999999 99998763
No 94
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.72 E-value=0.012 Score=54.23 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=109.9
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHhhhh---ccCCCCCCHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAK---GMNPFVFVVYRQAFASLALSPFAFFLE---SQNASPLSYSSVCKIFL 84 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~---g~~~~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~ 84 (368)
.+...|-++++++++++|...++.|.=.++ .++--.+.-+-.++..++++|..+... .++..-++..+...+++
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~ 322 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVF 322 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeH
Confidence 466889999999999999999999985543 256556666666777777776554332 23333334556666788
Q ss_pred HHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 85 VSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 85 ~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.+.++...+-.+|..|.-.+++-.+++-.++.....++.=.++-+..+++. .++|.+.+++|.+++..
T Consensus 323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 888999999999999999999999999888776666676677766667777 99999999999999865
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.51 E-value=0.0032 Score=55.96 Aligned_cols=132 Identities=12% Similarity=-0.018 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672 194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT 273 (368)
Q Consensus 194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~ 273 (368)
|.+.+++|+++++-..+=.||.- ..|. .....+++....+...+..+..+.+ . +..+..+|...=..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gDg-~~fQw~~~~~i~~~g~~v~~~~~~p--~--------f~p~amlgG~lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGDG-FFFQWVMCSGIFLVGLVVNLILGFP--P--------FYPWAMLGGALWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCCc-HHHHHHHHHHHHHHHHHHHHhcCCC--c--------ceeHHHhhhhhhhcC
Confidence 56778999999999999888753 3343 5555555555555445444333221 1 112222232223344
Q ss_pred HHHHHHHHhccCcceeeecch-hHHHHHHHHHHH-Hhcccc-----cchhHhHHHHHHHHHHHhhcccccc
Q 017672 274 YWIQVWAIEKKGPVFIAIFTP-FALIITAIFSAF-LWKETL-----HWGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 274 ~~l~~~a~~~~~a~~~~~~~~-~~pv~~~i~~~~-~~~e~~-----~~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
..+-.-.+|.++-...-.+-. .+.+.+...+-+ +||+.+ .+..++|++++++|..+...-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 455556666666655544443 356666666544 455432 5667899999999988876655544
No 96
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.16 Score=46.78 Aligned_cols=142 Identities=18% Similarity=0.123 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCCC---cchhHHHHHHHHHHHHHHHHHHhhc---C--CCccc---ccchhhHHH
Q 017672 193 KGALIMISANTAWSLWLVLQGYIIKQYPA---KVRLTTLQCFFSCIQSAFWAVAAER---N--PSAWK---LGWDIHLVS 261 (368)
Q Consensus 193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~---~~~~~~~~~ 261 (368)
.-.+..+...+.++......|...+..++ |.+..+..-+.-.+.+....+..+. + ..... ...+.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 44455555666667777666665443222 2455555555555555555534321 1 11100 111112222
Q ss_pred HHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 262 VVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 262 l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
+..-+. .-.+.+-+++.++.+.+|+...+...+..+.+.++..+++++++++.||...++.+.|+.++.....
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 222222 3345666999999999999999999999999999999999999999999999999999999884433
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.0018 Score=56.23 Aligned_cols=132 Identities=14% Similarity=0.068 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHHHHhhhHH
Q 017672 194 GALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCGLVINGIT 273 (368)
Q Consensus 194 G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~i~ 273 (368)
.++.+++=++.|+..-....|...+ |.+.+.-..+.+.+..+.+.++..+. . +...+..-+..|. .=.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~~~p~---~---T~~~~iv~~isG~-~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLFVSPE---L---TLTIFIVGFISGA-FWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHheeecCc---c---chhhHHHHHHhhh-Hhhhh
Confidence 5678889999999888776664333 35555444444444444443332111 1 1112223233344 33478
Q ss_pred HHHHHHHHhccCcceeeecc-hhHHHHHHHHHHHHhcccccchhH----hHHHHHHHHHHHhhcccc
Q 017672 274 YWIQVWAIEKKGPVFIAIFT-PFALIITAIFSAFLWKETLHWGSV----GGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 274 ~~l~~~a~~~~~a~~~~~~~-~~~pv~~~i~~~~~~~e~~~~~~~----~G~~lii~gi~~~~~~~~ 335 (368)
+..++++.+..+.+++.++. -++.+-+.+++.++|||..+..+. +..++++.|+++..++++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 89999999999999999865 477888899999999999988775 456677788887766444
No 98
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.03 E-value=0.082 Score=47.61 Aligned_cols=140 Identities=10% Similarity=0.086 Sum_probs=109.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCCC-----CCCHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNAS-----PLSYSSVCKIFLV 85 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 85 (368)
+...|+.++....++-|+.+..-..+.++ +++++.+.+.-.++.++.-....+.... .++ +..+.-++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHH
Confidence 46679999999999999998888877754 7999999999999888887776543322 122 1234455566777
Q ss_pred HHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 86 SLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
+.++ +.++.+.++-++.-++-.-+.|..+--++..+++.+.++.++++. |+.|+.+.+.|+.+=...
T Consensus 248 s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 248 STCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEILL 314 (327)
T ss_pred HHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHHH
Confidence 7776 556667778888877777788888899999999999999999999 999999999999886553
No 99
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.50 E-value=0.044 Score=48.10 Aligned_cols=59 Identities=14% Similarity=-0.003 Sum_probs=52.5
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
+....+....++|.+....+....+.++++.+++.++++|+++.. ++.|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 445557788899999999999999999999999999999999999 99999999988653
No 100
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.42 E-value=0.0063 Score=55.00 Aligned_cols=127 Identities=20% Similarity=0.221 Sum_probs=93.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcccccchhhHHHHHHHH
Q 017672 187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVSVVYCG 266 (368)
Q Consensus 187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 266 (368)
...++..|..+++.+.+..+...++.||..++... ...+ .-++. .+... + .+-+.|
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~r-------------a~~gg---~~yl~--~--~~Ww~G 70 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGLR-------------AGEGG---YGYLK--E--PLWWAG 70 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hccc-------------ccCCC---cchhh--h--HHHHHH
Confidence 34566789999999999999999999987666421 0000 01111 11111 1 122335
Q ss_pred HHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccccc
Q 017672 267 LVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 267 i~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
.+..+++-.+-+.+....+++.++.+..++.+++.+++.++++|++++...+|+++.++|..+.+....++
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 56666777778888888999999999999999999999999999999999999999999987776544433
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.40 E-value=0.3 Score=39.67 Aligned_cols=140 Identities=11% Similarity=0.010 Sum_probs=79.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
....++..+++..+-.....+.-.+.++.-+|+.-.+..+.++.+++..+.+..+++......++.-++...-|+++ +.
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AI 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hh
Confidence 45567778888888888888888877773359999999999999988888876433211111112122222233333 22
Q ss_pred HHHHHHHhccccChhhhhhcccchhHHHHHHH-HH-HhcccccccccccccchhhHHHhHHhHHHH
Q 017672 93 SLNLYYVAINYTTATFAAATTNTIPAITFVLA-GL-LRIESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 93 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~-~~-~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
.-...........++....+.-..-+...++- .+ ++++ .+|+++..+++|+++.++|+.++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~---~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV---PKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC---CcCCCCHHHHHHHHHHHHHHHHh
Confidence 22233344455555555444333333333322 11 2221 11334445999999999995555
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.68 E-value=0.47 Score=43.18 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHHHHHHHHHHhhcCCCcccccchhhHHH--HHHHHH
Q 017672 192 IKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT--LQCFFSCIQSAFWAVAAERNPSAWKLGWDIHLVS--VVYCGL 267 (368)
Q Consensus 192 ~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~gi 267 (368)
.....-++.-+++..+..+..|....+++-|..... .|.+.+.+........---+.+.......+.|.. +++.+-
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~ 90 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGM 90 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHH
Confidence 344555555566666667778888887775455444 8888888777665533211122211112223333 333332
Q ss_pred HhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 268 VINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 268 ~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
.+.-.+++++++....+++....|+++.+...+++|-+++...+.....+++|.....
T Consensus 91 ------i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 91 ------LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred ------HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 2233478999999999999999999999999999999999999999999999876654
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=94.00 E-value=0.023 Score=47.72 Aligned_cols=63 Identities=13% Similarity=0.207 Sum_probs=57.5
Q ss_pred HHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 273 TYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 273 ~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
+.++|..++++++|+.++.+..-+-.+..+++|+++++++....++.+++.+.|+.+..+..+
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 456899999999999999999999999999999999999999999999999999888775443
No 104
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.86 E-value=0.31 Score=41.94 Aligned_cols=137 Identities=15% Similarity=0.195 Sum_probs=100.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCC----CCCCHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLESQNA----SPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~ 90 (368)
|++++....+.-+..-...|.-.+- ...-....++..+.+.++++.+.+..+.+.. ..++......+++.|++..
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 4455555544444444444443321 2456677899999999999988876554221 1233445567778888775
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
..++ +--+.++-++.+..++...+.-.-.++.+.++++|+.++. .+.++.+++..-++-...
T Consensus 236 giSy-~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYava 297 (309)
T COG5070 236 GISY-CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYAVA 297 (309)
T ss_pred hhhh-ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHHHH
Confidence 5555 8889999999999999999999999999999999999999 999999998887777653
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=93.04 E-value=1.5 Score=32.92 Aligned_cols=111 Identities=14% Similarity=0.219 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------hHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 017672 19 AMIFVQFAYAGMALFSKAAIAKGMN------PFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTL 92 (368)
Q Consensus 19 ~~~l~~~~~~~~~~~~k~~~~~g~~------~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (368)
-++...++||..+++.|..... ++ .....+.|-..... .+++++..++ ++.+
T Consensus 7 ~lvaVgllWG~Tnplirrgs~g-~~~v~~~~~k~~~~lqe~~tl~----------------l~w~Y~iPFl----lNqc- 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSLG-WDKVKSSSRKIMIALQEMKTLF----------------LNWEYLIPFL----LNQC- 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHhh-HhhccCchHHHHHHHHHHHHHH----------------HhHHHHHHHH----HHHh-
Confidence 3566789999999999987642 22 23333333221110 0133333332 3333
Q ss_pred HHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 93 SLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 93 ~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
...+||.-+++++.+.+..+.+ +.-.|+.+.+..+ +|++..++ .++|..+.++|+.+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence 3458889999999999997665 7788888888875 55544441 7889999999987753
No 106
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=92.87 E-value=0.93 Score=41.89 Aligned_cols=146 Identities=13% Similarity=-0.003 Sum_probs=89.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHh--hcCC-CcccccchhhHHHHHHHH
Q 017672 190 RWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAA--ERNP-SAWKLGWDIHLVSVVYCG 266 (368)
Q Consensus 190 ~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~~~g 266 (368)
+...|+++..+++++.+.+.+-.||. |+.+ ++.......+-.-+..|..... -++. +.....+...+....+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 45789999999999999999999884 5542 4444333333333333433222 1111 122223334555556666
Q ss_pred HHhhhHHHHHHHHHHhccCccee-eecchhHHHHHHHHHHHHhcc-------cccchhHhHHHHHHHHHHHhhccccccc
Q 017672 267 LVINGITYWIQVWAIEKKGPVFI-AIFTPFALIITAIFSAFLWKE-------TLHWGSVGGAVLLVGGLYSVLWGKNREE 338 (368)
Q Consensus 267 i~~~~i~~~l~~~a~~~~~a~~~-~~~~~~~pv~~~i~~~~~~~e-------~~~~~~~~G~~lii~gi~~~~~~~~~~~ 338 (368)
++= .++-..|-.++|+++.+.. ++..-+..+++.++-.++.|+ +-....++|.++.++|+.+.-+....|+
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke 159 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE 159 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence 643 3666788899999987543 445555566666665555432 2244678999999999988876554443
Q ss_pred h
Q 017672 339 R 339 (368)
Q Consensus 339 ~ 339 (368)
+
T Consensus 160 ~ 160 (344)
T PF06379_consen 160 K 160 (344)
T ss_pred h
Confidence 3
No 107
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.59 E-value=1.8 Score=37.76 Aligned_cols=137 Identities=13% Similarity=0.080 Sum_probs=95.7
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH----------hhhhccCCCCCCHH
Q 017672 9 AFTASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFA----------FFLESQNASPLSYS 77 (368)
Q Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~----------~~~~~~~~~~~~~~ 77 (368)
+-.+-..|-++++++...-|.....--....+ --+.-.+.+.-.+-+.+.+-.-. .+.+| . ..
T Consensus 166 e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~R--h----P~ 239 (337)
T KOG1580|consen 166 EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQR--H----PY 239 (337)
T ss_pred cccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHh--c----cH
Confidence 33445578889999988888887776554432 12223333333333333322211 11222 1 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 78 SVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 78 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
.++.+.++++.+ ++.+.+.+.-..+-+|-..+++..+--.|+.+.+.++++.+++.+ ||+|..+.+.|...=.
T Consensus 240 ~~~~l~l~ai~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 240 VFWDLTLLAIAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHHHHHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhHh
Confidence 466667777665 677778899999999999999999999999999999999999999 9999999999987755
Q ss_pred h
Q 017672 158 F 158 (368)
Q Consensus 158 ~ 158 (368)
.
T Consensus 313 ~ 313 (337)
T KOG1580|consen 313 V 313 (337)
T ss_pred h
Confidence 4
No 108
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.97 E-value=0.43 Score=42.50 Aligned_cols=143 Identities=20% Similarity=0.161 Sum_probs=103.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHhhhhc----cCCCCC-CHHHHHHHHHH
Q 017672 12 ASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAFFLES----QNASPL-SYSSVCKIFLV 85 (368)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 85 (368)
-.+.|+++-+++.+.-+.+.+..|..... |=.-+.+.++..+.+.+.++|...+.+. ...+++ .++-|..+.+.
T Consensus 182 ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLs 261 (347)
T KOG1442|consen 182 LSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLS 261 (347)
T ss_pred cchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHH
Confidence 35789999999999999999999965543 3346788899999999999998876432 222232 45667777777
Q ss_pred HHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcC
Q 017672 86 SLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKG 161 (368)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~ 161 (368)
|++++..++. -.+=++.++|-.--+-.......=.+++..+++|..+.. .|.+-++.+.|-..-.+.++
T Consensus 262 glfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 262 GLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence 7777666652 223345566554444344445555688899999999999 99999999999988876544
No 109
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=90.11 E-value=2.7 Score=38.22 Aligned_cols=122 Identities=15% Similarity=0.221 Sum_probs=84.3
Q ss_pred HHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCCcc--cccchhhHHHHHHHHHHhhhHHHHHHHHHHhccCccee
Q 017672 212 QGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPSAW--KLGWDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFI 289 (368)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~ 289 (368)
.++..++++-|+..+.....+-...........+...+.. +..+....-.+.-.|+ +++.=..+-++++++++.+..
T Consensus 35 ~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlY 113 (349)
T KOG1443|consen 35 FKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLY 113 (349)
T ss_pred hhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeee
Confidence 3444455665677777777776666655554444432221 1111111212223333 566667788999999999999
Q ss_pred eecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672 290 AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 290 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~ 334 (368)
++.-+..+++..+++.++-=|+++|....=..+|-+|+++..+..
T Consensus 114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 999999999999999998889999999998889989988877643
No 110
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=86.98 E-value=6.7 Score=35.25 Aligned_cols=141 Identities=13% Similarity=0.100 Sum_probs=92.2
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHh--hhhc----cC----CCCC--
Q 017672 8 NAFTASQKPYIAMIFVQFAYAGMALFSKAAIAK-GMNPFVFVVYRQAFASLALSPFAF--FLES----QN----ASPL-- 74 (368)
Q Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~-g~~~~~~~~~r~~~~~l~l~~~~~--~~~~----~~----~~~~-- 74 (368)
.++.....|+.++.++.+.-+.+.+......+. |-++-+..++.-+...+.++...- ..+. .. .|..
T Consensus 157 ~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~ 236 (330)
T KOG1583|consen 157 SDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGF 236 (330)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCc
Confidence 345567789999999999999888888877654 899999999999988887776421 0000 00 0110
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccc----cChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhH
Q 017672 75 SYSSVCKIFLVSLFGLTLSLNLYYVAINY----TTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSV 150 (368)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~ 150 (368)
.-...+.+++.. ++.+..=..+... +++-+.++...+-=.+..+++.+.++.++++. .|+|..+.+
T Consensus 237 ~vP~~~~yLl~n----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF 306 (330)
T KOG1583|consen 237 KVPSMWVYLLFN----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVF 306 (330)
T ss_pred cccHHHHHHHHH----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHH
Confidence 011112222211 2222111122222 33445556667777888899999999999999 999999999
Q ss_pred HhHHHHhh
Q 017672 151 SGALVFAF 158 (368)
Q Consensus 151 ~Gv~li~~ 158 (368)
.|.++...
T Consensus 307 ~Gt~~fa~ 314 (330)
T KOG1583|consen 307 FGTLLFAN 314 (330)
T ss_pred HHHHHHHH
Confidence 99999875
No 111
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=85.70 E-value=1.5 Score=39.77 Aligned_cols=130 Identities=10% Similarity=0.010 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHHHHHHHHHHHhhcCCC-----------cccccchhhHHHHHHHHH
Q 017672 199 ISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSCIQSAFWAVAAERNPS-----------AWKLGWDIHLVSVVYCGL 267 (368)
Q Consensus 199 l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~gi 267 (368)
+++.+||+-.-..+|-..++... .+..++=..++.++..++..+.-+... +....+...+.. .+.|.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~-A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-PQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLF-AMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-cceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHH-HHHhh
Confidence 46778888888888877654332 223444455555554444433322111 111112222333 33443
Q ss_pred HhhhHHHHHHHHHHhccCcceeeecc-hhHHHHHHHHHHHHhccccc--chhHhHHHHHHHHHHHhh
Q 017672 268 VINGITYWIQVWAIEKKGPVFIAIFT-PFALIITAIFSAFLWKETLH--WGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 268 ~~~~i~~~l~~~a~~~~~a~~~~~~~-~~~pv~~~i~~~~~~~e~~~--~~~~~G~~lii~gi~~~~ 331 (368)
+.--++.++..+++...+.+++-++. .+..++++++.++ ++.+.+ ...+.|.+++++++++-.
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 34448889999999998887776644 3334445555554 344443 356779999988887754
No 112
>PRK02237 hypothetical protein; Provisional
Probab=83.64 E-value=3.9 Score=31.04 Aligned_cols=46 Identities=9% Similarity=0.032 Sum_probs=38.6
Q ss_pred eecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 290 AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 290 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
+...-...+.+++++|.+=|++|+...++|.++.++|+.+..+..+
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 4456677788999999999999999999999999999877765443
No 113
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=81.84 E-value=64 Score=32.88 Aligned_cols=22 Identities=18% Similarity=0.036 Sum_probs=12.7
Q ss_pred cccccchhhHHHhHHhHHHHhh
Q 017672 137 LHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 137 ~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
|.++.-+++..+..++..++..
T Consensus 378 ~~Kw~li~~~~~~ta~~Gama~ 399 (599)
T PF06609_consen 378 HIKWQLIFGSVLMTAFCGAMAA 399 (599)
T ss_pred chhHHHHHHHHHHHHHHHHHHH
Confidence 3444456777776666555543
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=81.66 E-value=1.7 Score=38.96 Aligned_cols=64 Identities=13% Similarity=0.083 Sum_probs=57.1
Q ss_pred hhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672 269 INGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW 332 (368)
Q Consensus 269 ~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~ 332 (368)
+-..+-.+++.++..++++..-++.-...+++.+++..+++.+++..+|+|+..+..|+..+-.
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 5556678899999999999999999999999999999999999999999999999999877643
No 115
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=81.11 E-value=35 Score=29.33 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=22.5
Q ss_pred HHHHHHHhcccccchhHhHHHHHHH--HHHHhhc
Q 017672 301 AIFSAFLWKETLHWGSVGGAVLLVG--GLYSVLW 332 (368)
Q Consensus 301 ~i~~~~~~~e~~~~~~~~G~~lii~--gi~~~~~ 332 (368)
-.+|..++++..-+.+..|..+.++ |.+...+
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4457788888888888888888763 4444443
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=78.63 E-value=8.7 Score=34.43 Aligned_cols=141 Identities=18% Similarity=0.110 Sum_probs=91.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHhhhhcc-----CCCCCCHHHHHHHHHHH
Q 017672 13 SQKPYIAMIFVQFAYAGMALFSKAAI-AKGMNPFVFVVYRQAFASLALSPFAFFLESQ-----NASPLSYSSVCKIFLVS 86 (368)
Q Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~k~~~-~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~g 86 (368)
+..|+.++-.+.+.-+...-+-.... .++-+..+++++...++.++++........- .-.+.+++.+...++.+
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS 267 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence 45566666666666555444443333 3356678888999988888877665543321 01112345555555555
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhc
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVK 160 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~ 160 (368)
..+..+-. .-..=++.-++..++.+...--..|.+++++++..+++.. ..-+..+.+.|+.+=...+
T Consensus 268 ~~gylG~~-~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 268 LAGYLGIV-FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhHhhHH-HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence 44432222 2222234456777777777778889999999999999999 8899999999999987744
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.34 E-value=3.6 Score=31.12 Aligned_cols=44 Identities=9% Similarity=0.111 Sum_probs=37.3
Q ss_pred cchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhcccc
Q 017672 292 FTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 292 ~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
..-...+.++++++.+=+++|+...++|..+.++|+.+..+..|
T Consensus 63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 45556678899999999999999999999999999887766543
No 118
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=77.09 E-value=2.4 Score=31.95 Aligned_cols=30 Identities=30% Similarity=0.592 Sum_probs=26.1
Q ss_pred HHHHHHHhcccccchhHhHHHHHHHHHHHh
Q 017672 301 AIFSAFLWKETLHWGSVGGAVLLVGGLYSV 330 (368)
Q Consensus 301 ~i~~~~~~~e~~~~~~~~G~~lii~gi~~~ 330 (368)
..++.++++|++++....|.++++++++.+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456778899999999999999999997754
No 119
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.41 E-value=7.3 Score=28.92 Aligned_cols=34 Identities=32% Similarity=0.617 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672 299 ITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW 332 (368)
Q Consensus 299 ~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~ 332 (368)
+=..++.++++|++.+..+.|.+++.+|+++..+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 3356788899999999999999999999987653
No 120
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=73.42 E-value=4.4 Score=35.92 Aligned_cols=137 Identities=13% Similarity=0.109 Sum_probs=86.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHH
Q 017672 11 TASQKPYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGL 90 (368)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 90 (368)
.+..+|-.++++++.++|.+++.-....++ .+..++...-.+++.++..+=.+ ..+.+...+.|..-....+..++++
T Consensus 162 snp~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ~i-~~~~~~~tl~w~~~i~~yl~f~L~M 239 (336)
T KOG2766|consen 162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQFI-FERHHVSTLHWDSAIFLYLRFALTM 239 (336)
T ss_pred CCCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHh-hhccceeeEeehHHHHHHHHHHHHH
Confidence 356788889999999999999999998888 99999999888999988877643 3333344443321122222233333
Q ss_pred HHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 91 TLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 91 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
...+.+.-.=++..+++...+-.-+.-.+..++ ..++-++.|- -.++......|.++-.
T Consensus 240 FllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 240 FLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEee
Confidence 333333333444445443333333344444444 3345557777 8999999999988764
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.15 E-value=22 Score=26.95 Aligned_cols=29 Identities=3% Similarity=-0.038 Sum_probs=23.1
Q ss_pred HHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 121 FVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 121 ~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
+.++.+++||++++. ...|.++.+.++..
T Consensus 77 ~~Fsv~~l~E~l~~n------~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWN------YLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHH------HHHHHHHHHHhhhe
Confidence 466788999999999 88888877666544
No 122
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=70.90 E-value=15 Score=27.76 Aligned_cols=60 Identities=18% Similarity=0.154 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhccCcceeeec-chhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhh
Q 017672 272 ITYWIQVWAIEKKGPVFIAIF-TPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVL 331 (368)
Q Consensus 272 i~~~l~~~a~~~~~a~~~~~~-~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~ 331 (368)
.+-.+|+.-+.+.+-+.+..+ +++.-.++.+.|...-.|......++|..+++.|+.+..
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 445677788888888777765 456778888999876666778888999999999987653
No 123
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=67.10 E-value=83 Score=27.10 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccChhhhhhcccchhHHHHHHHHHHh
Q 017672 77 SSVCKIFLVSLFGLTLSLNLYYVAINYTTATFAAATTNTIPAITFVLAGLLR 128 (368)
Q Consensus 77 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~ 128 (368)
+.+++.++.++..+.... ..+......|+...- .+.|....+++.+.+
T Consensus 144 ~~~~k~~~~~~~~~~~w~-~~~~~~~~lp~~inp---~l~~~~~iiig~i~~ 191 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWI-VIFVLTSFLPPVINP---VLPPWVYIIIGVIAF 191 (206)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHHccccCCc---CCCHHHHHHHHHHHH
Confidence 334444444444333333 333344445554322 234455455554433
No 124
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=66.97 E-value=14 Score=29.62 Aligned_cols=15 Identities=20% Similarity=0.388 Sum_probs=8.3
Q ss_pred hHhHHHHHHHHHHHh
Q 017672 316 SVGGAVLLVGGLYSV 330 (368)
Q Consensus 316 ~~~G~~lii~gi~~~ 330 (368)
.++|..+.+.|++..
T Consensus 89 ~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445666666664443
No 125
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=65.35 E-value=77 Score=26.12 Aligned_cols=53 Identities=19% Similarity=0.255 Sum_probs=38.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHh-----hhhCCCcchhHHHHHHHHHHHHHHHH
Q 017672 189 GRWIKGALIMISANTAWSLWLVLQGYI-----IKQYPAKVRLTTLQCFFSCIQSAFWA 241 (368)
Q Consensus 189 ~~~~~G~~~~l~a~~~~a~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (368)
.+........+.+++.+++-+++-.-. ..+.|.|.....+.++.+.++.+.+.
T Consensus 128 ~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFm 185 (193)
T COG4657 128 HNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred hhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHc
Confidence 456678888999999999888765433 33556667777777777777777655
No 126
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=64.62 E-value=2.2 Score=38.17 Aligned_cols=48 Identities=10% Similarity=-0.016 Sum_probs=0.0
Q ss_pred cChhhhhhcccchhHHHHHHH-HHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672 104 TTATFAAATTNTIPAITFVLA-GLLRIESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 104 ~~~~~~~~i~~~~p~~~~ll~-~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
.+-+...++++.+.+++.++- .++||+|+--- ...++++++++-..+.
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCP-----LGlLCiilimi~lLv~ 95 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCP-----LGLLCIILIMIVLLVS 95 (381)
T ss_dssp ------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCc-----chHHHHHHHHHHHHHH
Confidence 333444456665555554444 33444443222 1455555554444433
No 127
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=64.43 E-value=57 Score=27.53 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 017672 16 PYIAMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLESQNASPLSYSSVCKIFLVSLFGLTLSLN 95 (368)
Q Consensus 16 ~~~~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (368)
+.+..-+-+++-|.+..+.+.+..+|+=...++..-..+++.++--+....+..+-+ +..+++.++.....+.+..
T Consensus 101 sLl~lg~~aLlsgitaff~~nA~~~GlItlll~a~vgGfamy~my~y~yr~~ad~sq---r~~~~K~~lv~~~sm~lWi- 176 (226)
T COG4858 101 SLLFLGAMALLSGITAFFQKNAQVYGLITLLLTAVVGGFAMYIMYYYAYRMRADNSQ---RPGTWKYLLVAVLSMLLWI- 176 (226)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHhhhHHHHHHHHHHHHhhccccc---CCchHHHHHHHHHHHHHHH-
Confidence 344455556777888888887655554444444444444433333333322211111 1223334444444444444
Q ss_pred HHHHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccc
Q 017672 96 LYYVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGI 140 (368)
Q Consensus 96 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~ 140 (368)
.-+.+-.+.|++.- -.+-|+...+.+.+.+.-|+-.+|+++.
T Consensus 177 ~v~i~t~~lPtslN---~~L~pi~l~IiGav~lalRfylkkk~NI 218 (226)
T COG4858 177 AVMIATVFLPTSLN---PQLPPIALTIIGAVILALRFYLKKKKNI 218 (226)
T ss_pred HHHHHHhhCCCcCC---cCCchHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33355556665432 2456666666666655555555544443
No 128
>PF15102 TMEM154: TMEM154 protein family
Probab=61.21 E-value=8.8 Score=30.92 Aligned_cols=25 Identities=20% Similarity=0.230 Sum_probs=14.9
Q ss_pred HhHHHHHHHHHHHhhccccccchhc
Q 017672 317 VGGAVLLVGGLYSVLWGKNREERIN 341 (368)
Q Consensus 317 ~~G~~lii~gi~~~~~~~~~~~~~~ 341 (368)
++++++++..++++.+.|+++.|..
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~~ 90 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQE 90 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCCC
Confidence 4455566666777766666555443
No 129
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=58.53 E-value=20 Score=27.07 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=37.3
Q ss_pred eecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhccc
Q 017672 290 AIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 290 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~~~ 334 (368)
+...-...+.++++.+++=|.+|+.+.++|.++-++|+.+..++.
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 345666778889999999999999999999999999977766553
No 130
>PRK02237 hypothetical protein; Provisional
Probab=56.14 E-value=14 Score=28.16 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=32.0
Q ss_pred chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 115 TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 115 ~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
...+...+-.+.+-++|++.. .++|..++++|+.++.+
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 455555677888999999999 99999999999999875
No 131
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=52.62 E-value=13 Score=28.17 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=32.7
Q ss_pred chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 115 TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 115 ~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
...+...+-.+.+-++|+++. .++|..++++|+.++.+
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 555666777888999999999 99999999999999976
No 132
>PF15471 TMEM171: Transmembrane protein family 171
Probab=49.94 E-value=19 Score=32.07 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=18.0
Q ss_pred chhHhHHHHHHHHHHHhhcccccc
Q 017672 314 WGSVGGAVLLVGGLYSVLWGKNRE 337 (368)
Q Consensus 314 ~~~~~G~~lii~gi~~~~~~~~~~ 337 (368)
..|++|-++++.|++..+...-||
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKK 184 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKK 184 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeee
Confidence 358999999999988876554433
No 133
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=47.59 E-value=11 Score=29.57 Aligned_cols=14 Identities=7% Similarity=0.116 Sum_probs=5.9
Q ss_pred hHHHHHHHHHHHhh
Q 017672 318 GGAVLLVGGLYSVL 331 (368)
Q Consensus 318 ~G~~lii~gi~~~~ 331 (368)
+|++++++.+.+..
T Consensus 75 aGvIg~Illi~y~i 88 (122)
T PF01102_consen 75 AGVIGIILLISYCI 88 (122)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444333333
No 134
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=47.21 E-value=16 Score=22.70 Aligned_cols=17 Identities=18% Similarity=0.419 Sum_probs=9.2
Q ss_pred ccchhHhHHHHHHHHHH
Q 017672 312 LHWGSVGGAVLLVGGLY 328 (368)
Q Consensus 312 ~~~~~~~G~~lii~gi~ 328 (368)
|+|..++=.++|+.|++
T Consensus 2 p~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIF 18 (49)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 45555555555555553
No 135
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=45.77 E-value=5.5 Score=35.70 Aligned_cols=23 Identities=22% Similarity=0.722 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhccCcceeeecc
Q 017672 271 GITYWIQVWAIEKKGPVFIAIFT 293 (368)
Q Consensus 271 ~i~~~l~~~a~~~~~a~~~~~~~ 293 (368)
+++.++|.+.+++.+|+.-+++.
T Consensus 119 aL~vW~Ym~lLr~~GAs~WtiLa 141 (381)
T PF05297_consen 119 ALGVWFYMWLLRELGASFWTILA 141 (381)
T ss_dssp -----------------------
T ss_pred HHHHHHHHHHHHHhhhHHHHHHH
Confidence 35556667789999998776644
No 136
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=43.85 E-value=4.2e+02 Score=28.01 Aligned_cols=114 Identities=8% Similarity=-0.025 Sum_probs=57.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhhh-hccCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHhcc------cc----Chhh
Q 017672 42 MNPFVFVVYRQAFASLALSPFAFFL-ESQNASP--LSYSSVCKIFLVSLFGLTLSLNLYYVAIN------YT----TATF 108 (368)
Q Consensus 42 ~~~~~~~~~r~~~~~l~l~~~~~~~-~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~al~------~~----~~~~ 108 (368)
++|+++++...+.-.. .+.+.+-. +.++.|+ ...+.+......|.......+..|++++. .. +...
T Consensus 625 l~~~~il~~~l~~d~~-~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (755)
T TIGR01647 625 FPPIMVVIIAILNDGT-IMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGN 703 (755)
T ss_pred hhHHHHHHHHHHHhHh-HhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhh
Confidence 7788877777776643 22111111 1111111 11234444566666655555555555553 11 1223
Q ss_pred hhhcccchhHHHHHHHHHHhc-ccccccccccccchhhHHHhHHhHHHH
Q 017672 109 AAATTNTIPAITFVLAGLLRI-ESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 109 ~~~i~~~~p~~~~ll~~~~~~-e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
+....++.-+++-.+-.+..| ++..+.++|++.-.++.++..+-...+
T Consensus 704 ~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 704 LQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred hHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHH
Confidence 444445555555555544444 666677667777777766665544443
No 137
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=43.75 E-value=18 Score=33.07 Aligned_cols=129 Identities=13% Similarity=0.108 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhhhhc------cCCC-------CCCHHHHHHHHHHH
Q 017672 20 MIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFAFFLES------QNAS-------PLSYSSVCKIFLVS 86 (368)
Q Consensus 20 ~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~~~~~~------~~~~-------~~~~~~~~~~~~~g 86 (368)
++++.+|||.+....|.+.++|--| +...+-+.++.++...+.-+.-. ...| +-++.....-+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 3567899999999999887763333 23444555554444443322211 1111 12344444444444
Q ss_pred HHHHHHHHHHHHHhccccChhhhhhccc-chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHH
Q 017672 87 LFGLTLSLNLYYVAINYTTATFAAATTN-TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALV 155 (368)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~l 155 (368)
++ ..+.+.+..+|+.+.+.+.+-++.. +.-+.-+.+-+ |+..|++.- . --..|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n~a---~-iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKINRA---E-ILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCCCc---e-EEEccHHHHHHHHHH
Confidence 44 4566667888888888887776664 33333333333 345555432 0 023455555554444
No 138
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=43.32 E-value=3.2e+02 Score=26.51 Aligned_cols=20 Identities=20% Similarity=0.335 Sum_probs=8.2
Q ss_pred cchhcccccCCCCCCCCCCc
Q 017672 337 EERINKIVGNDNDEENPEGK 356 (368)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~ 356 (368)
++|..-+.+..++++|.|+|
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~ 450 (455)
T TIGR00892 431 EQKAALEREGARDKKDAEGD 450 (455)
T ss_pred HHHHHHhhcccccccccccc
Confidence 33333333444444444443
No 139
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.36 E-value=3.1e+02 Score=25.83 Aligned_cols=18 Identities=11% Similarity=0.073 Sum_probs=7.1
Q ss_pred HHHHHHHHHHhhhHHHHH
Q 017672 259 LVSVVYCGLVINGITYWI 276 (368)
Q Consensus 259 ~~~l~~~gi~~~~i~~~l 276 (368)
++.+...+.+..++++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~ 79 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLL 79 (385)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 333333333344444433
No 140
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=37.11 E-value=20 Score=28.86 Aligned_cols=23 Identities=13% Similarity=0.142 Sum_probs=13.8
Q ss_pred CcceeeecchhHHHHHHHHHHHH
Q 017672 285 GPVFIAIFTPFALIITAIFSAFL 307 (368)
Q Consensus 285 ~a~~~~~~~~~~pv~~~i~~~~~ 307 (368)
+...++.+.|+.|.++++++.+.
T Consensus 73 slL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 73 SLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556666777776666554
No 141
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=36.53 E-value=2.6e+02 Score=23.63 Aligned_cols=31 Identities=16% Similarity=0.256 Sum_probs=22.3
Q ss_pred HHHHHHHhcccccchhHhHHHHHHH--HHHHhh
Q 017672 301 AIFSAFLWKETLHWGSVGGAVLLVG--GLYSVL 331 (368)
Q Consensus 301 ~i~~~~~~~e~~~~~~~~G~~lii~--gi~~~~ 331 (368)
-.+|..++.|..-+.+..|..+.++ |.+...
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa 164 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLT 164 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4457788888888889999888774 444444
No 142
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=34.92 E-value=1.7e+02 Score=23.75 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=24.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017672 188 IGRWIKGALIMISANTAWSLWLVLQGYIIK 217 (368)
Q Consensus 188 ~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~ 217 (368)
+.+.....+..++++..|.-|...+||..+
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~ 145 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKN 145 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhh
Confidence 345567889999999999999999999644
No 143
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=34.68 E-value=4.3e+02 Score=25.52 Aligned_cols=56 Identities=7% Similarity=-0.151 Sum_probs=30.9
Q ss_pred ccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 101 INYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 101 l~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
+.+.+-+-..++-...-......++ +++.|..+.+++++..--...++++|..++-
T Consensus 152 lG~~DfAG~~vVH~~gG~~~L~~a~-~LGpR~~r~~~~~~~~~~n~~~~~lGt~lLw 207 (403)
T TIGR00836 152 LGVLDFAGGGVVHIVGGVAGLAAAL-VLGPRIGRFPRPVAIRPHNVPLVVLGTFILW 207 (403)
T ss_pred cCcchhcCceeEecchhHHHHHHHH-HhcCCCCCCcCcCCCCCCCHHHHHHHHHHHH
Confidence 4455555555666666555555554 4555544332222333446677778877764
No 144
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=34.55 E-value=2.8e+02 Score=27.37 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=37.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHH--HHHHHHHHHHHHHHHH
Q 017672 188 IGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTT--LQCFFSCIQSAFWAVA 243 (368)
Q Consensus 188 ~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 243 (368)
+.+...|.+....+.+.-....++.+++.+.+++..+... .....+.....++...
T Consensus 283 ~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~ 340 (493)
T KOG1330|consen 283 NATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL 340 (493)
T ss_pred ccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH
Confidence 4566788899999999999999999998887765333333 3334444455554443
No 145
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=30.99 E-value=1.6e+02 Score=19.38 Aligned_cols=45 Identities=20% Similarity=0.375 Sum_probs=33.9
Q ss_pred chhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcccCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 017672 142 KVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQVSESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQGYIIKQ 218 (368)
Q Consensus 142 ~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~ 218 (368)
..+|..+.++|++++.. .| .|.+..+++....|-..-..|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~l-PG-------------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PG-------------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CC-------------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 57888889999988865 22 36777788888888888887776554
No 146
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=30.25 E-value=2e+02 Score=28.33 Aligned_cols=23 Identities=9% Similarity=0.323 Sum_probs=18.6
Q ss_pred ccchhHhHHHHHHHHHHHhhccc
Q 017672 312 LHWGSVGGAVLLVGGLYSVLWGK 334 (368)
Q Consensus 312 ~~~~~~~G~~lii~gi~~~~~~~ 334 (368)
++..|++...++++|+++..+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 67889999999999987776543
No 147
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.15 E-value=1.8e+02 Score=22.28 Aligned_cols=10 Identities=20% Similarity=0.218 Sum_probs=5.2
Q ss_pred HHHHHHHHHH
Q 017672 298 IITAIFSAFL 307 (368)
Q Consensus 298 v~~~i~~~~~ 307 (368)
++++.++|+.
T Consensus 57 lVGa~iG~ll 66 (116)
T COG5336 57 LVGAGIGWLL 66 (116)
T ss_pred HHHHHHHHHH
Confidence 4555555553
No 148
>COG3715 ManY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]
Probab=29.03 E-value=4.3e+02 Score=23.82 Aligned_cols=15 Identities=27% Similarity=0.561 Sum_probs=10.7
Q ss_pred hhHHHhHHhHHHHhh
Q 017672 144 LGSVVSVSGALVFAF 158 (368)
Q Consensus 144 ~gi~l~~~Gv~li~~ 158 (368)
+++-++.+|..+..+
T Consensus 98 lAiPiA~a~q~l~~~ 112 (265)
T COG3715 98 LAIPIAVAGQFLTTF 112 (265)
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777777654
No 149
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=28.65 E-value=2e+02 Score=27.30 Aligned_cols=21 Identities=19% Similarity=0.055 Sum_probs=14.4
Q ss_pred HHHHHHhcccccccccccccc
Q 017672 122 VLAGLLRIESISIKYLHGIAK 142 (368)
Q Consensus 122 ll~~~~~~e~~~~~~~~~~~~ 142 (368)
++--.++|+|++.-||+..+.
T Consensus 16 LliG~~Lr~ki~~lqk~~IPa 36 (368)
T PF03616_consen 16 LLIGKFLRAKIPFLQKLFIPA 36 (368)
T ss_pred HHHHHHHHHHhHHHHHccCCc
Confidence 333446889999997766655
No 150
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=28.29 E-value=45 Score=22.95 Aligned_cols=19 Identities=11% Similarity=-0.193 Sum_probs=9.8
Q ss_pred HhHHHHHHHHHHHhhcccc
Q 017672 317 VGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 317 ~~G~~lii~gi~~~~~~~~ 335 (368)
++++-.+++|.+++...++
T Consensus 7 Li~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 7 LIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4455555566555543333
No 151
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=27.71 E-value=2.6e+02 Score=20.78 Aligned_cols=59 Identities=17% Similarity=0.007 Sum_probs=34.3
Q ss_pred HHHHHhccCcceeeecchhHHHHHHHHHHHH---hccc-ccchhHhHHHHHHHHHHHhhcccc
Q 017672 277 QVWAIEKKGPVFIAIFTPFALIITAIFSAFL---WKET-LHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 277 ~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~---~~e~-~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
...++++++....-.+-.++.+++++++.+. .++. +-...|.|...=+.+.-+..-..+
T Consensus 21 lVq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~ 83 (93)
T PF06946_consen 21 LVQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTN 83 (93)
T ss_pred HHHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHh
Confidence 4677788766666666666677777776653 2332 222346777655555555443333
No 152
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=27.01 E-value=85 Score=20.36 Aligned_cols=7 Identities=29% Similarity=0.059 Sum_probs=2.6
Q ss_pred HHHHHhh
Q 017672 325 GGLYSVL 331 (368)
Q Consensus 325 ~gi~~~~ 331 (368)
.|+.+..
T Consensus 16 Lg~~I~~ 22 (50)
T PF12606_consen 16 LGLSICT 22 (50)
T ss_pred HHHHHHH
Confidence 3433333
No 153
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=26.27 E-value=1.4e+02 Score=22.20 Aligned_cols=17 Identities=18% Similarity=0.462 Sum_probs=7.9
Q ss_pred HhHHHHHHHHHHHhhcc
Q 017672 317 VGGAVLLVGGLYSVLWG 333 (368)
Q Consensus 317 ~~G~~lii~gi~~~~~~ 333 (368)
++|+++++=+.+...|+
T Consensus 50 f~Gi~lMlPAav~ivWR 66 (96)
T PF07214_consen 50 FVGIGLMLPAAVNIVWR 66 (96)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555443444454
No 154
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=25.36 E-value=77 Score=24.87 Aligned_cols=16 Identities=19% Similarity=0.600 Sum_probs=8.6
Q ss_pred HHHHHHHHhhhHHHHH
Q 017672 261 SVVYCGLVINGITYWI 276 (368)
Q Consensus 261 ~l~~~gi~~~~i~~~l 276 (368)
.++..|++.+.++|.+
T Consensus 58 vili~GvvvT~vays~ 73 (129)
T PF15099_consen 58 VILIAGVVVTAVAYSF 73 (129)
T ss_pred HHHHHhhHhheeeEee
Confidence 3455566566555543
No 155
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=25.13 E-value=8.4e+02 Score=25.86 Aligned_cols=45 Identities=18% Similarity=0.090 Sum_probs=29.7
Q ss_pred hhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHH
Q 017672 106 ATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVF 156 (368)
Q Consensus 106 ~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li 156 (368)
.+.+.++..+.|.-.+.++.+...+|.+.. .+.+.+-.++|.+.+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 355677888999999999988755553333 455555556666554
No 156
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=25.11 E-value=73 Score=21.45 Aligned_cols=17 Identities=29% Similarity=0.661 Sum_probs=14.8
Q ss_pred chhhHHHhHHhHHHHhh
Q 017672 142 KVLGSVVSVSGALVFAF 158 (368)
Q Consensus 142 ~~~gi~l~~~Gv~li~~ 158 (368)
|++|+++.+.|+.++.+
T Consensus 1 kiigi~Llv~GivLl~~ 17 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYF 17 (59)
T ss_pred CeeeehHHHHHHHHHHh
Confidence 46889999999999986
No 157
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=25.01 E-value=1.4e+02 Score=21.19 Aligned_cols=44 Identities=9% Similarity=0.230 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Q 017672 19 AMIFVQFAYAGMALFSKAAIAKGMNPFVFVVYRQAFASLALSPFA 63 (368)
Q Consensus 19 ~~~l~~~~~~~~~~~~k~~~~~g~~~~~~~~~r~~~~~l~l~~~~ 63 (368)
+.+++.+.|.....+.+--... +....+.+.-+.+.++.++-+.
T Consensus 25 LtvLs~~~w~iWw~~f~d~P~s-ieSIALl~~~~AfsgLL~lHLv 68 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDTPTS-IESIALLFFCFAFSGLLFLHLV 68 (77)
T ss_pred HHHHHHHHHHHHHHHHcCCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888888888888855444 5566666666666666555443
No 158
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=24.92 E-value=39 Score=26.87 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=11.3
Q ss_pred eeecchhHHHHHHHHHHHH
Q 017672 289 IAIFTPFALIITAIFSAFL 307 (368)
Q Consensus 289 ~~~~~~~~pv~~~i~~~~~ 307 (368)
++.+.|+-|++.++.+.++
T Consensus 70 aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 70 AAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3345566666666666654
No 159
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.91 E-value=6.6e+02 Score=24.54 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhC
Q 017672 193 KGALIMISANTAWSLWLVLQGYIIKQY 219 (368)
Q Consensus 193 ~G~~~~l~a~~~~a~~~~~~~~~~~~~ 219 (368)
.+..+.+.|+.|-++-....+...++.
T Consensus 351 F~~AYliAa~a~i~Li~~Y~~~vl~~~ 377 (430)
T PF06123_consen 351 FNLAYLIAALACIGLISLYLSSVLKSW 377 (430)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 455666666666666666666655553
No 160
>PF15345 TMEM51: Transmembrane protein 51
Probab=24.51 E-value=48 Score=28.96 Aligned_cols=22 Identities=23% Similarity=0.365 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHhhccccccch
Q 017672 318 GGAVLLVGGLYSVLWGKNREER 339 (368)
Q Consensus 318 ~G~~lii~gi~~~~~~~~~~~~ 339 (368)
.|++|.+..+++-.+.|+|+..
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 4778888888888877666543
No 161
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=24.40 E-value=2.6e+02 Score=21.07 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=23.6
Q ss_pred hhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHh
Q 017672 116 IPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFA 157 (368)
Q Consensus 116 ~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~ 157 (368)
.|++..++.-.++.|++... .+.-+.+.++|+++=+
T Consensus 54 ~pil~G~~lG~WLD~~~~t~------~~~tl~~lllGv~~G~ 89 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSP------FSWTLTMLIVGVVIGC 89 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCC------cHHHHHHHHHHHHHHH
Confidence 36666666666788887766 5555666666666543
No 162
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=24.37 E-value=5.1e+02 Score=23.07 Aligned_cols=46 Identities=15% Similarity=-0.032 Sum_probs=23.9
Q ss_pred CcceeeecchhHHHHHHHHHHHHhcccccc-----hhHhHHHHHHHHHHHh
Q 017672 285 GPVFIAIFTPFALIITAIFSAFLWKETLHW-----GSVGGAVLLVGGLYSV 330 (368)
Q Consensus 285 ~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~-----~~~~G~~lii~gi~~~ 330 (368)
.++........--.+.....|.++|-.++- .-.+|..+-+.-..++
T Consensus 154 kSvE~mPf~Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly 204 (243)
T KOG1623|consen 154 KSVEYMPFPLSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILY 204 (243)
T ss_pred CceeeechHHHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHh
Confidence 555555544433344445556565543322 2245666666666666
No 163
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=23.94 E-value=62 Score=19.87 Aligned_cols=18 Identities=22% Similarity=0.645 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHhhcccc
Q 017672 318 GGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 318 ~G~~lii~gi~~~~~~~~ 335 (368)
+|.++++.+.+++.|+++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 455555666666654444
No 164
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=23.56 E-value=2.3e+02 Score=23.72 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=42.9
Q ss_pred HHhccccChhhhhhcccchhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhhhcCCCCCCCCCChhhhhcc
Q 017672 98 YVAINYTTATFAAATTNTIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFVKGPPLRFLNWYPEIQKQV 177 (368)
Q Consensus 98 ~~al~~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 177 (368)
+.+.++.+.-.++...-.+.+....+.++.. +++... +-.-+..+.+.|...+.+. ++
T Consensus 14 F~~yk~~~I~~AT~~livAt~i~l~~~w~~~-rkv~km-----~l~s~~~v~vFG~lTl~f~-~d--------------- 71 (180)
T COG2917 14 FAAYKVYGIYAATAVLIVATVIQLAILWIKY-RKVEKM-----QLISGVVVVVFGGLTLIFH-ND--------------- 71 (180)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-hhhHHH-----HHHHHHHHHHhchhHhhcc-Cc---------------
Confidence 3333443444444333334444555556543 333444 1344455556666666542 21
Q ss_pred cCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 017672 178 SESSPTNDCPIGRWIKGALIMISANTAWSLWLVLQG 213 (368)
Q Consensus 178 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~~ 213 (368)
.--.+-.-++..+.|.+..+.....-|
T Consensus 72 ---------~FIKwK~TIi~~lFa~~Llgs~~~~~k 98 (180)
T COG2917 72 ---------TFIKWKPTIIYWLFALVLLGSQFLFKK 98 (180)
T ss_pred ---------ceEEeeHHHHHHHHHHHHHHHHHHhcC
Confidence 333445677777888777775554443
No 165
>COG2246 Predicted membrane protein [Function unknown]
Probab=23.49 E-value=2.4e+02 Score=22.60 Aligned_cols=59 Identities=8% Similarity=0.154 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccChhhhhhcccchhHHHHHHHHHHhccccccccc
Q 017672 75 SYSSVCKIFLVSLFGLTLSLNLYYVAIN--YTTATFAAATTNTIPAITFVLAGLLRIESISIKYL 137 (368)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~--~~~~~~~~~i~~~~p~~~~ll~~~~~~e~~~~~~~ 137 (368)
..++..++...|..+...+...++.-.+ ..+...+.++.+. +.++...+.+++.+.+.+
T Consensus 9 ~~~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~a~~----~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 9 TLSRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAIAYE----AAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHHhcccchHHHHHHHHH----HHHHHHHHHHceeeEeec
Confidence 4678889999999998888766655555 3445555554443 344444556677666655
No 166
>PF06781 UPF0233: Uncharacterised protein family (UPF0233); InterPro: IPR009619 This is a group of proteins of unknown function.
Probab=23.02 E-value=1.6e+02 Score=21.53 Aligned_cols=58 Identities=12% Similarity=0.164 Sum_probs=36.2
Q ss_pred chhhHHHHHHHHHHhhhHHHHHHHHHHhccCcceeeecchhHHHHHHHHHHHHhcccccchhHhHHHHHHHHHHHhhc
Q 017672 255 WDIHLVSVVYCGLVINGITYWIQVWAIEKKGPVFIAIFTPFALIITAIFSAFLWKETLHWGSVGGAVLLVGGLYSVLW 332 (368)
Q Consensus 255 ~~~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~G~~lii~gi~~~~~ 332 (368)
....|..-+.++++.-++.....+|..... .....+-=+|+..+|.+++++|.++..+
T Consensus 28 ~sp~W~~p~m~~lmllGL~WiVvyYi~~~~--------------------i~pi~~lG~WN~~IGfg~~~~Gf~mt~r 85 (87)
T PF06781_consen 28 PSPRWYAPLMLGLMLLGLLWIVVYYISGGQ--------------------IPPIPDLGNWNLAIGFGLMIVGFLMTMR 85 (87)
T ss_pred CCCccHHHHHHHHHHHHHHHHhhhhcccCC--------------------CCCcccccchHHHHHHHHHHHHHHHHcc
Confidence 335677777777766666666665554433 0111222267788999999999877654
No 167
>TIGR02005 PTS-IIBC-alpha PTS system, alpha-glucoside-specific IIBC component. This model represents a family of fused PTS enzyme II B and C domains. A gene from Clostridium has been partially characterized as a maltose transporter, while genes from Fusobacterium and Klebsiella have been proposed to transport the five non-standard isomers of sucrose.
Probab=22.80 E-value=5.5e+02 Score=25.81 Aligned_cols=27 Identities=22% Similarity=0.293 Sum_probs=22.1
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHhccCc
Q 017672 260 VSVVYCGLVINGITYWIQVWAIEKKGP 286 (368)
Q Consensus 260 ~~l~~~gi~~~~i~~~l~~~a~~~~~a 286 (368)
++++.+|++..++.|+.+.+.+++.+-
T Consensus 385 ~~~i~iGi~~~~iYy~vF~f~I~kfnl 411 (524)
T TIGR02005 385 VTQIIIGLCFTAIYFLVFRFLILKFNI 411 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 344788998899999999999998754
No 168
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=22.79 E-value=61 Score=25.44 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=10.8
Q ss_pred HhHHHHHHHHHHHh-hccccccchh
Q 017672 317 VGGAVLLVGGLYSV-LWGKNREERI 340 (368)
Q Consensus 317 ~~G~~lii~gi~~~-~~~~~~~~~~ 340 (368)
++|+..-++|+++. .+.-+|.+|+
T Consensus 70 i~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34555555554444 4445544444
No 169
>TIGR01943 rnfA electron transport complex, RnfABCDGE type, A subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit.
Probab=22.75 E-value=4.8e+02 Score=22.23 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=31.5
Q ss_pred HHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 122 VLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 122 ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
+...-..|||+...+-|...|=..+.+..+|++-+.+.
T Consensus 147 l~l~a~iRE~l~~~~vP~~~~G~pI~li~aglmalaF~ 184 (190)
T TIGR01943 147 MVIFAGIRERLDLSDVPKAFRGSPIALITAGLMSLAFM 184 (190)
T ss_pred HHHHHHHHHHHccCCCCccccCcCHHHHHHHHHHHHHh
Confidence 33444689999999889999999999999999988763
No 170
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=22.43 E-value=52 Score=24.88 Aligned_cols=38 Identities=13% Similarity=0.146 Sum_probs=30.9
Q ss_pred chhHHHHHHHHHHhcccccccccccccchhhHHHhHHhHHHHhh
Q 017672 115 TIPAITFVLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAF 158 (368)
Q Consensus 115 ~~p~~~~ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~ 158 (368)
.......+-.+++-+.|+++. .++|..++++|+.++.+
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 455556666788888888888 99999999999888875
No 171
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=22.42 E-value=93 Score=17.73 Aligned_cols=15 Identities=27% Similarity=-0.004 Sum_probs=7.7
Q ss_pred cchhHhHHHHHHHHH
Q 017672 313 HWGSVGGAVLLVGGL 327 (368)
Q Consensus 313 ~~~~~~G~~lii~gi 327 (368)
.+..++|.+++..+.
T Consensus 11 ~~~~~~G~~l~~~~~ 25 (34)
T TIGR01167 11 SLLLLLGLLLLGLGG 25 (34)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445566764444433
No 172
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=22.33 E-value=1.1e+02 Score=20.66 Aligned_cols=20 Identities=5% Similarity=0.076 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHhhccccccc
Q 017672 319 GAVLLVGGLYSVLWGKNREE 338 (368)
Q Consensus 319 G~~lii~gi~~~~~~~~~~~ 338 (368)
-..+.+.|++...+++.++.
T Consensus 17 ~~~l~fiavi~~ayr~~~K~ 36 (60)
T COG4736 17 AFTLFFIAVIYFAYRPGKKG 36 (60)
T ss_pred HHHHHHHHHHHHHhcccchh
Confidence 34455566666555554443
No 173
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=21.97 E-value=73 Score=23.18 Aligned_cols=25 Identities=20% Similarity=0.200 Sum_probs=19.4
Q ss_pred cccchhHhHHHHHHHHHHHhhcccc
Q 017672 311 TLHWGSVGGAVLLVGGLYSVLWGKN 335 (368)
Q Consensus 311 ~~~~~~~~G~~lii~gi~~~~~~~~ 335 (368)
..++..++|..++++|..++..+..
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~ 28 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFF 28 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577889999999999888865433
No 174
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=21.88 E-value=5.7e+02 Score=22.75 Aligned_cols=47 Identities=11% Similarity=-0.015 Sum_probs=32.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCcchhHHHHHHHHH
Q 017672 187 PIGRWIKGALIMISANTAWSLWLVLQGYIIKQYPAKVRLTTLQCFFSC 234 (368)
Q Consensus 187 ~~~~~~~G~~~~l~a~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
.......|.+++......||.=....|+..|+.+. ..+-+...+...
T Consensus 122 ~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSv-E~mPf~Ls~a~f 168 (243)
T KOG1623|consen 122 ERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSV-EYMPFPLSFALF 168 (243)
T ss_pred ceeeeeeehhhhhhhHHhhhccHHhhhhheecCce-eeechHHHHHHH
Confidence 34456789999999999999988888887776542 334444333333
No 175
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=20.52 E-value=1.7e+02 Score=17.91 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=20.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCh
Q 017672 72 SPLSYSSVCKIFLVSLFGLTLSLNLYYVAINYTTA 106 (368)
Q Consensus 72 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 106 (368)
|+..+|+..-++..|..+......+|-+.--++|+
T Consensus 4 Pdm~RR~lmN~ll~Gava~~a~~~lyP~~~ffvPP 38 (39)
T PF08802_consen 4 PDMSRRQLMNLLLGGAVAVPAGGMLYPYVKFFVPP 38 (39)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred CChhHHHHHHHHHHhhHHHHHHHHhhhheeEecCC
Confidence 44557778888888877766666566555444443
No 176
>PRK10110 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Provisional
Probab=20.41 E-value=4.6e+02 Score=26.38 Aligned_cols=30 Identities=17% Similarity=0.055 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHhccCc
Q 017672 257 IHLVSVVYCGLVINGITYWIQVWAIEKKGP 286 (368)
Q Consensus 257 ~~~~~l~~~gi~~~~i~~~l~~~a~~~~~a 286 (368)
.+|++++.+|++..++.|..+.+.+++.+.
T Consensus 395 ~~~~~~~~~g~~~~~iyy~vF~f~I~kfnl 424 (530)
T PRK10110 395 TKWYMVPVVAAIWFVVYYVIFRFAITRFNL 424 (530)
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 457778888998899999999999998754
No 177
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=20.36 E-value=5.5e+02 Score=21.96 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=31.8
Q ss_pred HHHHHHhcccccccccccccchhhHHHhHHhHHHHhhh
Q 017672 122 VLAGLLRIESISIKYLHGIAKVLGSVVSVSGALVFAFV 159 (368)
Q Consensus 122 ll~~~~~~e~~~~~~~~~~~~~~gi~l~~~Gv~li~~~ 159 (368)
+...-..|||+...+-|...|=..+.+..+|++-+.+.
T Consensus 148 l~lla~iRErl~~~~vP~~~~G~pI~li~aglmalaF~ 185 (193)
T PRK05151 148 LVLFAAIRERLAVADVPAPFRGAAIALITAGLMSLAFM 185 (193)
T ss_pred HHHHHHHHHHHcCCCCCcccCCccHHHHHHHHHHHHHh
Confidence 33344679999999999999999999999999988773
No 178
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=20.18 E-value=5.7e+02 Score=22.03 Aligned_cols=32 Identities=31% Similarity=0.231 Sum_probs=17.5
Q ss_pred cChhhhhhcccchhHHHHHHHHHH-hcc-ccccc
Q 017672 104 TTATFAAATTNTIPAITFVLAGLL-RIE-SISIK 135 (368)
Q Consensus 104 ~~~~~~~~i~~~~p~~~~ll~~~~-~~e-~~~~~ 135 (368)
.++.++..+....-+.+.+.+..- .|| +++++
T Consensus 31 l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 64 (240)
T PF01925_consen 31 LPPKQAVATSLFINLFTSLIAALRHRKHGNIDWK 64 (240)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHccccchh
Confidence 466666666666556666665443 333 25544
Done!