BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017674
MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQA
NTKLPSRPSSSSQPNSGSVRSGSNSGPVKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQ
LDYSGSGSGSVKAGYGSAVTSLGEDVKVGFRVSRAVAWVVMVVVAMGVMVGAFLMVAVKK
AVVLVAVAAVVGPLFIGMIWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGS
IPLESSYQRVPRCVYVSTELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSG
LRALVKAGYGAKVAPFVKPATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGFAP
LFSVLCPY

High Scoring Gene Products

Symbol, full name Information P value
AT4G22290 protein from Arabidopsis thaliana 2.7e-91
AT1G16860 protein from Arabidopsis thaliana 2.0e-77
AT1G78880 protein from Arabidopsis thaliana 5.2e-75

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017674
        (368 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2132075 - symbol:AT4G22290 "AT4G22290" species...   910  2.7e-91   1
TAIR|locus:2015646 - symbol:AT1G16860 species:3702 "Arabi...   568  2.0e-77   2
TAIR|locus:2037533 - symbol:AT1G78880 "AT1G78880" species...   550  5.2e-75   2


>TAIR|locus:2132075 [details] [associations]
            symbol:AT4G22290 "AT4G22290" species:3702 "Arabidopsis
            thaliana" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0006508 GO:GO:0008233 UniGene:At.47267 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY140104 EMBL:BT006592 IPI:IPI00534218
            RefSeq:NP_193960.2 UniGene:At.71029 PRIDE:Q8L6X7
            EnsemblPlants:AT4G22290.1 GeneID:828324 KEGG:ath:AT4G22290
            TAIR:At4g22290 InParanoid:Q8L6X7 OMA:AGRIQSH PhylomeDB:Q8L6X7
            Genevestigator:Q8L6X7 Uniprot:Q8L6X7
        Length = 445

 Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
 Identities = 179/275 (65%), Positives = 204/275 (74%)

Query:    89 KKTSGPLP-LQPTGLITSGPIGS-GPL--SNRRSGQLDYSGSGSGSVKAGYGSAVTSLGE 144
             KK SGPL  LQPTGLITSG +GS GP+   +RRSGQLD+  S   S K  YGS+VTSL  
Sbjct:   109 KKFSGPLSQLQPTGLITSGSLGSSGPILSGSRRSGQLDHQLSNLASSKPKYGSSVTSLNV 168

Query:   145 D-VKVGFRVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPLFIGMIWNCV 203
             D V+VGF+V +                                      P  + ++WNCV
Sbjct:   169 DPVRVGFKVPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVLAAVCPAIVVLVWNCV 228

Query:   204 WGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVSTELHEY 263
             W R+GLL F+KKYPD ELRGAIDGQ+VKVTGVVTCGSIPLESS+QR PRCVYVSTEL+EY
Sbjct:   229 WRRKGLLSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVYVSTELYEY 288

Query:   264 KGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVKPATVV 323
             KG GGK ANPKHRCFSWGSRH EKYVSDFYISDFQSGLRALVKAGYG+KV+PFVKPATV 
Sbjct:   289 KGFGGKSANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVA 348

Query:   324 NITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGF 358
             N+T  N+DLSPSFL+WL+DRNLS+DDR+MRLKEG+
Sbjct:   349 NVTTQNKDLSPSFLKWLSDRNLSADDRVMRLKEGY 383

 Score = 236 (88.1 bits), Expect = 2.7e-19, P = 2.7e-19
 Identities = 63/142 (44%), Positives = 76/142 (53%)

Query:     1 MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQA 60
             M  RI SHQL +GLYVSG+ EQ KER PTMA+RAVPYTGGD+KKSGELG+MFDI V D A
Sbjct:     1 MAGRIQSHQLPNGLYVSGKLEQPKERPPTMAARAVPYTGGDIKKSGELGRMFDISVVDSA 60

Query:    61 NTKLXXXXXXXXXXXXXXXXXXXXXXXXKKTSGPLPLQPTGLITSGPIG------SGPLS 114
             + +                           +S P     +G + SGP        SGPLS
Sbjct:    61 SFQGPPPLIVGGNSSGGTSRLQAPPRVSGSSSNP----NSGSVRSGPNSGSVKKFSGPLS 116

Query:   115 NRRSGQLDYSGS--GSGSVKAG 134
               +   L  SGS   SG + +G
Sbjct:   117 QLQPTGLITSGSLGSSGPILSG 138


>TAIR|locus:2015646 [details] [associations]
            symbol:AT1G16860 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] GO:GO:0016021
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 EMBL:AC051629
            EMBL:AY050887 EMBL:AY117261 EMBL:BT000665 IPI:IPI00537841
            PIR:H86303 RefSeq:NP_564009.1 UniGene:At.21790 PaxDb:Q9FZ45
            PRIDE:Q9FZ45 EnsemblPlants:AT1G16860.1 GeneID:838257
            KEGG:ath:AT1G16860 TAIR:At1g16860 eggNOG:NOG257904
            HOGENOM:HOG000242640 InParanoid:Q9FZ45 OMA:MIVPSSE PhylomeDB:Q9FZ45
            ProtClustDB:CLSN2679796 Genevestigator:Q9FZ45 Uniprot:Q9FZ45
        Length = 474

 Score = 568 (205.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
 Identities = 102/160 (63%), Positives = 126/160 (78%)

Query:   199 IWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVST 258
             IWN  WGRRG+  F+ +YPD +LR A +GQ+VKVTGVVTCG++PLESS+ RVPRCVY ST
Sbjct:   253 IWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTST 312

Query:   259 ELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVK 318
              L+EY+G G KPAN  HR F+WG R  E++V DFYISDFQSGLRALVK G GAKV P V 
Sbjct:   313 CLYEYRGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVD 372

Query:   319 PATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGF 358
              + V++  +G+  +SP F+RWL  +NL+SDDRIMRLKEG+
Sbjct:   373 DSVVIDFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGY 412

 Score = 230 (86.0 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
 Identities = 55/133 (41%), Positives = 69/133 (51%)

Query:     1 MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQA 60
             M +R PSHQLS+GL+VSGRPEQ KER PTM++ A+PYTGGD+K+SGELGKMFDI   D  
Sbjct:     1 MGSRYPSHQLSNGLFVSGRPEQPKERAPTMSAVAMPYTGGDIKRSGELGKMFDIPA-DGT 59

Query:    61 NTKLXXXXXXXXXXXXXXXXXXXXXXXXKKTSGPLP--LQPTGLITSGPIGSGPLSNRRS 118
              ++                            +G +   L   G ++     SGPLS    
Sbjct:    60 KSRKSGPIPGAPSRSGSFAGTAQSGPGAPMATGRMSGSLASAGSVSMKKTNSGPLSKHGE 119

Query:   119 GQLDYSGSGSGSV 131
                  SG  SG V
Sbjct:   120 PLKKSSGPQSGGV 132

 Score = 106 (42.4 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
 Identities = 32/65 (49%), Positives = 41/65 (63%)

Query:    89 KKTSGPLPLQP-TGLITSGPIGSGPLSN----RR-SGQLDYSG-SGSGSVKAGYGSAVTS 141
             ++ SG +P+ P TGLITSGPI SGPL++    R+ SG LD SG   S      +  AVT+
Sbjct:   134 RQNSGSIPILPATGLITSGPITSGPLNSSGAPRKVSGPLDSSGLMKSHMPTVVHNQAVTT 193

Query:   142 LG-ED 145
             LG ED
Sbjct:   194 LGPED 198

 Score = 41 (19.5 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query:    89 KKT-SGPLPLQPTGLI-TSGPIGSGPLSNRRSGQL 121
             KKT SGPL      L  +SGP  SG ++ + SG +
Sbjct:   107 KKTNSGPLSKHGEPLKKSSGP-QSGGVTRQNSGSI 140

 Score = 41 (19.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query:   122 DYSGSGSGSVKAGYGSAVTSLGED-VKVGFR 151
             D+       VK G G+ VT L +D V + F+
Sbjct:   350 DFQSGLRALVKTGSGAKVTPLVDDSVVIDFK 380


>TAIR|locus:2037533 [details] [associations]
            symbol:AT1G78880 "AT1G78880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            GO:GO:0006508 GO:GO:0008233 EMBL:AC005679 HOGENOM:HOG000242640
            ProtClustDB:CLSN2679796 EMBL:AY072176 EMBL:AY096686 EMBL:AY120734
            EMBL:BT000364 IPI:IPI00537430 PIR:C96818 RefSeq:NP_178009.1
            UniGene:At.21193 PaxDb:Q9ZVA7 PRIDE:Q9ZVA7
            EnsemblPlants:AT1G78880.1 GeneID:844225 KEGG:ath:AT1G78880
            TAIR:At1g78880 eggNOG:NOG292696 InParanoid:Q9ZVA7 OMA:WNISCER
            PhylomeDB:Q9ZVA7 ArrayExpress:Q9ZVA7 Genevestigator:Q9ZVA7
            Uniprot:Q9ZVA7
        Length = 468

 Score = 550 (198.7 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
 Identities = 101/160 (63%), Positives = 122/160 (76%)

Query:   199 IWNCVWGRRGLLGFVKKYPDTELRGAIDGQYVKVTGVVTCGSIPLESSYQRVPRCVYVST 258
             IWN    RRG+  F+ +YPD +LR A +GQYVKVTGVVTCG++PLESS+ RVPRCVY ST
Sbjct:   247 IWNISCERRGITDFIARYPDADLRTAKNGQYVKVTGVVTCGNVPLESSFHRVPRCVYTST 306

Query:   259 ELHEYKGCGGKPANPKHRCFSWGSRHLEKYVSDFYISDFQSGLRALVKAGYGAKVAPFVK 318
              L+EY+G G KPAN  HR F+WG R  E++V DFYISDFQSGLRALVK G GAKV P V 
Sbjct:   307 CLYEYRGWGSKPANASHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGNGAKVTPLVD 366

Query:   319 PATVVNITKGNRDLSPSFLRWLADRNLSSDDRIMRLKEGF 358
              + V++   GN   SP F+RWL  +NL++DDRIMRLKEG+
Sbjct:   367 DSVVIDFKPGNEQASPDFVRWLGKKNLTNDDRIMRLKEGY 406

 Score = 225 (84.3 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
 Identities = 59/131 (45%), Positives = 68/131 (51%)

Query:     1 MTTRIPSHQLSSGLYVSGRPEQLKERQPTMASRAVPYTGGDVKKSGELGKMFDIQVTDQA 60
             M +R  SHQLS+GL+VSGRPEQ KE+ PTM+S A+PYTGGD+KKSGELGKMFDI  TD  
Sbjct:     1 MGSRYASHQLSNGLFVSGRPEQPKEKPPTMSSVAMPYTGGDIKKSGELGKMFDIP-TD-- 57

Query:    61 NTKLXXXXXXXXXXXXXXXXXXXXXXXXKKTSGPLPLQPTGLITSGPIGSGPLSNRRSGQ 120
              TK                          + SG L     G  +     SGPLS      
Sbjct:    58 GTKSRKSGPITGGSSRSGAQSGPVPNATGRMSGNLA--SAGSNSMKKTNSGPLSKHGEPL 115

Query:   121 LDYSGSGSGSV 131
                SG  SG V
Sbjct:   116 KKSSGPQSGGV 126

 Score = 121 (47.7 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 33/65 (50%), Positives = 44/65 (67%)

Query:    89 KKTSGPLPLQPT-GLITSGPIGSGPLSN----RR-SGQLDYSGSGSGSVKAG-YGSAVTS 141
             ++ SGP+P+ PT GLITSGPI SGPL++    R+ SG LDYSGS    + +  +  AVT+
Sbjct:   128 RQNSGPIPILPTTGLITSGPITSGPLNSSGAPRKISGPLDYSGSMKTHMPSVVHNQAVTT 187

Query:   142 LG-ED 145
             L  ED
Sbjct:   188 LAPED 192

 Score = 41 (19.5 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query:   122 DYSGSGSGSVKAGYGSAVTSLGED-VKVGFR 151
             D+       VK G G+ VT L +D V + F+
Sbjct:   344 DFQSGLRALVKTGNGAKVTPLVDDSVVIDFK 374


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.137   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      368       307    0.0010  115 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  208 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.65u 0.09s 22.74t   Elapsed:  00:00:02
  Total cpu time:  22.65u 0.09s 22.74t   Elapsed:  00:00:02
  Start:  Thu May  9 14:14:02 2013   End:  Thu May  9 14:14:04 2013

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