Query 017679
Match_columns 368
No_of_seqs 239 out of 1534
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 02:30:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017679.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017679hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02897 tetrahydrofolate dehy 100.0 2E-101 4E-106 757.1 33.0 342 14-366 4-345 (345)
2 PLN02616 tetrahydrofolate dehy 100.0 1.3E-94 2.8E-99 711.7 33.4 327 36-367 34-363 (364)
3 COG0190 FolD 5,10-methylene-te 100.0 4.3E-93 9.3E-98 680.3 31.2 282 75-367 1-282 (283)
4 PRK14171 bifunctional 5,10-met 100.0 3E-92 6.4E-97 680.6 32.1 283 73-365 1-283 (288)
5 PRK14170 bifunctional 5,10-met 100.0 4.1E-92 8.9E-97 678.5 31.4 283 73-367 1-283 (284)
6 PLN02516 methylenetetrahydrofo 100.0 2.4E-91 5.2E-96 677.4 32.8 294 70-366 5-298 (299)
7 PRK14187 bifunctional 5,10-met 100.0 2.8E-91 6E-96 675.5 31.7 288 73-366 1-288 (294)
8 PRK14168 bifunctional 5,10-met 100.0 5.5E-91 1.2E-95 674.7 32.0 291 74-367 3-297 (297)
9 PRK14169 bifunctional 5,10-met 100.0 5E-91 1.1E-95 670.8 31.3 280 74-365 1-280 (282)
10 PRK14185 bifunctional 5,10-met 100.0 6.9E-91 1.5E-95 672.5 31.5 285 75-364 2-290 (293)
11 PRK14172 bifunctional 5,10-met 100.0 5.9E-91 1.3E-95 669.1 29.9 278 73-362 1-278 (278)
12 PRK14166 bifunctional 5,10-met 100.0 1.1E-90 2.4E-95 668.3 31.4 280 75-365 2-281 (282)
13 PRK14190 bifunctional 5,10-met 100.0 1.3E-90 2.8E-95 668.9 31.0 282 73-366 2-283 (284)
14 PRK14167 bifunctional 5,10-met 100.0 1.4E-90 2.9E-95 672.0 31.2 288 73-367 1-292 (297)
15 PRK14182 bifunctional 5,10-met 100.0 1.4E-90 3E-95 667.3 30.9 279 75-365 2-281 (282)
16 PRK14186 bifunctional 5,10-met 100.0 3.5E-90 7.6E-95 669.1 32.0 287 73-366 1-287 (297)
17 PRK14184 bifunctional 5,10-met 100.0 3.9E-90 8.4E-95 665.8 30.5 281 75-367 2-286 (286)
18 PRK14183 bifunctional 5,10-met 100.0 1E-89 2.2E-94 661.0 31.1 279 75-364 2-280 (281)
19 PRK14180 bifunctional 5,10-met 100.0 9.9E-90 2.1E-94 661.8 30.8 280 75-365 2-281 (282)
20 PRK14193 bifunctional 5,10-met 100.0 1.7E-89 3.8E-94 660.7 31.4 281 73-366 2-284 (284)
21 PRK14177 bifunctional 5,10-met 100.0 1.5E-89 3.3E-94 660.7 30.5 278 74-366 3-280 (284)
22 PRK14176 bifunctional 5,10-met 100.0 2.3E-89 5E-94 660.2 31.2 281 72-364 6-286 (287)
23 PRK14181 bifunctional 5,10-met 100.0 1.8E-89 3.9E-94 661.0 29.6 280 76-364 2-285 (287)
24 PRK14189 bifunctional 5,10-met 100.0 5.1E-89 1.1E-93 658.1 31.6 281 74-366 3-283 (285)
25 PRK10792 bifunctional 5,10-met 100.0 4.1E-89 9E-94 658.3 30.4 282 74-366 3-284 (285)
26 PRK14179 bifunctional 5,10-met 100.0 1.1E-88 2.4E-93 655.5 31.3 282 73-365 1-282 (284)
27 PRK14191 bifunctional 5,10-met 100.0 1.1E-88 2.4E-93 655.4 30.7 280 75-365 2-281 (285)
28 PRK14173 bifunctional 5,10-met 100.0 5.7E-88 1.2E-92 651.0 30.4 278 74-365 3-282 (287)
29 PRK14175 bifunctional 5,10-met 100.0 8.7E-88 1.9E-92 650.2 30.7 283 73-367 2-284 (286)
30 PRK14174 bifunctional 5,10-met 100.0 1.7E-87 3.6E-92 650.7 32.1 289 75-366 2-294 (295)
31 PRK14194 bifunctional 5,10-met 100.0 1.9E-86 4.1E-91 644.1 31.8 283 73-366 3-287 (301)
32 PRK14178 bifunctional 5,10-met 100.0 2.1E-86 4.5E-91 637.9 28.6 274 75-364 1-274 (279)
33 KOG4230 C1-tetrahydrofolate sy 100.0 1.4E-85 3.1E-90 665.8 27.1 290 73-365 2-292 (935)
34 PRK14188 bifunctional 5,10-met 100.0 2.3E-84 5E-89 629.6 32.7 287 73-365 1-289 (296)
35 PRK14192 bifunctional 5,10-met 100.0 1.1E-80 2.4E-85 601.5 30.6 282 73-366 2-283 (283)
36 KOG0089 Methylenetetrahydrofol 100.0 2.5E-80 5.3E-85 584.1 26.7 291 73-366 7-307 (309)
37 PF02882 THF_DHG_CYH_C: Tetrah 100.0 4.9E-53 1.1E-57 377.9 13.2 160 195-364 1-160 (160)
38 cd01079 NAD_bind_m-THF_DH NAD 100.0 4.9E-47 1.1E-51 347.4 14.2 158 187-365 1-196 (197)
39 cd01080 NAD_bind_m-THF_DH_Cycl 100.0 4.6E-41 9.9E-46 303.0 13.8 168 187-362 1-168 (168)
40 cd05212 NAD_bind_m-THF_DH_Cycl 100.0 8.3E-41 1.8E-45 293.2 13.8 137 207-361 3-139 (140)
41 PF00763 THF_DHG_CYH: Tetrahyd 100.0 1.7E-34 3.6E-39 246.0 14.2 117 75-192 1-117 (117)
42 PRK12549 shikimate 5-dehydroge 99.9 2.3E-22 5E-27 194.9 16.8 224 110-367 9-267 (284)
43 PRK00258 aroE shikimate 5-dehy 99.9 5.4E-22 1.2E-26 191.2 14.9 221 111-367 10-261 (278)
44 PRK12548 shikimate 5-dehydroge 99.9 6.2E-22 1.3E-26 192.1 15.4 222 110-367 13-276 (289)
45 PRK12749 quinate/shikimate deh 99.9 8.5E-22 1.8E-26 191.5 15.4 221 111-367 12-273 (288)
46 COG0169 AroE Shikimate 5-dehyd 99.9 8.4E-22 1.8E-26 191.1 15.2 219 112-367 12-266 (283)
47 PRK12550 shikimate 5-dehydroge 99.9 1.3E-21 2.8E-26 188.8 16.3 225 102-367 6-256 (272)
48 TIGR01809 Shik-DH-AROM shikima 99.9 1.8E-21 3.9E-26 188.3 16.2 223 109-367 8-271 (282)
49 PRK14027 quinate/shikimate deh 99.9 2E-21 4.3E-26 188.5 14.5 223 111-367 9-269 (283)
50 TIGR00507 aroE shikimate 5-deh 99.9 5.6E-21 1.2E-25 183.2 15.0 220 112-367 6-254 (270)
51 PLN02520 bifunctional 3-dehydr 99.8 5.5E-19 1.2E-23 184.6 16.1 220 110-367 256-515 (529)
52 PRK09310 aroDE bifunctional 3- 99.8 1E-18 2.2E-23 180.5 13.4 218 111-367 220-456 (477)
53 PRK08306 dipicolinate synthase 99.6 5.2E-15 1.1E-19 144.4 11.0 130 215-362 134-286 (296)
54 TIGR02853 spore_dpaA dipicolin 99.5 5.7E-14 1.2E-18 136.7 10.8 130 214-361 132-284 (287)
55 PF01488 Shikimate_DH: Shikima 99.2 2.3E-11 5E-16 105.6 4.5 87 222-309 2-114 (135)
56 COG0373 HemA Glutamyl-tRNA red 99.1 4E-11 8.6E-16 121.9 5.8 155 131-309 100-279 (414)
57 cd05191 NAD_bind_amino_acid_DH 99.1 3.3E-10 7.1E-15 90.9 7.5 78 214-304 1-86 (86)
58 cd01065 NAD_bind_Shikimate_DH 99.1 1.2E-09 2.7E-14 94.9 11.6 128 215-366 2-155 (155)
59 PTZ00075 Adenosylhomocysteinas 99.0 3.5E-10 7.7E-15 116.8 6.5 111 222-338 244-370 (476)
60 PF00670 AdoHcyase_NAD: S-aden 99.0 7.4E-10 1.6E-14 99.7 7.3 86 223-309 14-115 (162)
61 PRK13940 glutamyl-tRNA reducta 99.0 5.5E-10 1.2E-14 114.1 7.0 155 131-309 103-278 (414)
62 PRK00676 hemA glutamyl-tRNA re 98.8 1.2E-08 2.5E-13 101.8 7.6 155 130-309 96-266 (338)
63 cd01078 NAD_bind_H4MPT_DH NADP 98.7 7.5E-08 1.6E-12 87.7 11.1 95 215-309 7-134 (194)
64 PRK14982 acyl-ACP reductase; P 98.7 5.6E-08 1.2E-12 97.1 10.1 92 218-309 141-251 (340)
65 cd05311 NAD_bind_2_malic_enz N 98.6 9.2E-08 2E-12 90.3 8.5 92 215-309 8-132 (226)
66 PRK05476 S-adenosyl-L-homocyst 98.6 1.2E-07 2.5E-12 97.4 7.8 94 214-308 193-303 (425)
67 PLN00203 glutamyl-tRNA reducta 98.6 5.1E-08 1.1E-12 102.3 5.2 146 146-309 195-374 (519)
68 TIGR00518 alaDH alanine dehydr 98.5 7.5E-07 1.6E-11 89.9 10.3 124 230-362 165-320 (370)
69 TIGR00936 ahcY adenosylhomocys 98.5 5.5E-07 1.2E-11 91.9 9.1 94 214-308 176-286 (406)
70 PRK00045 hemA glutamyl-tRNA re 98.4 4.3E-07 9.3E-12 93.0 7.7 93 216-309 166-285 (423)
71 TIGR01035 hemA glutamyl-tRNA r 98.4 3.7E-07 8.1E-12 93.3 7.0 93 216-309 164-282 (417)
72 COG0686 Ald Alanine dehydrogen 98.4 7.8E-07 1.7E-11 87.5 7.4 117 230-357 166-316 (371)
73 cd05213 NAD_bind_Glutamyl_tRNA 98.4 5E-07 1.1E-11 88.9 6.0 154 131-308 100-277 (311)
74 cd00401 AdoHcyase S-adenosyl-L 98.3 2.2E-06 4.8E-11 87.8 9.1 95 213-308 183-293 (413)
75 PF02826 2-Hacid_dh_C: D-isome 98.3 1.4E-06 3.1E-11 78.8 6.5 83 225-308 29-131 (178)
76 COG0499 SAM1 S-adenosylhomocys 98.3 1.8E-06 3.8E-11 86.4 7.5 87 221-308 198-300 (420)
77 PLN02494 adenosylhomocysteinas 98.2 2.7E-06 5.9E-11 88.2 8.2 91 215-306 236-343 (477)
78 PLN02928 oxidoreductase family 98.2 3E-06 6.5E-11 84.8 6.9 136 228-365 155-335 (347)
79 TIGR00561 pntA NAD(P) transhyd 98.1 2.3E-05 5.1E-10 82.2 11.6 185 153-360 78-333 (511)
80 PRK15438 erythronate-4-phospha 98.0 1.3E-05 2.7E-10 81.4 8.0 144 222-366 106-279 (378)
81 PRK00257 erythronate-4-phospha 98.0 1.4E-05 3E-10 81.2 8.1 144 222-367 106-280 (381)
82 COG5322 Predicted dehydrogenas 98.0 1.9E-05 4.1E-10 76.6 8.4 93 217-309 152-266 (351)
83 PRK13243 glyoxylate reductase; 98.0 1.4E-05 3.1E-10 79.5 6.8 81 227-308 145-244 (333)
84 cd01075 NAD_bind_Leu_Phe_Val_D 98.0 2.1E-05 4.7E-10 72.8 7.4 94 213-308 3-119 (200)
85 PRK06718 precorrin-2 dehydroge 97.9 1.5E-05 3.3E-10 74.0 6.2 112 228-358 6-141 (202)
86 PRK06932 glycerate dehydrogena 97.9 1.7E-05 3.7E-10 78.4 6.4 136 228-365 143-310 (314)
87 PRK06436 glycerate dehydrogena 97.9 2E-05 4.4E-10 77.6 6.9 81 228-309 118-214 (303)
88 PRK06487 glycerate dehydrogena 97.9 2.2E-05 4.9E-10 77.6 6.7 136 228-365 144-308 (317)
89 PRK08410 2-hydroxyacid dehydro 97.9 2.9E-05 6.3E-10 76.6 7.1 80 228-308 141-236 (311)
90 TIGR02992 ectoine_eutC ectoine 97.9 3.5E-05 7.5E-10 76.4 7.6 75 231-306 128-226 (326)
91 PRK08605 D-lactate dehydrogena 97.9 3.8E-05 8.2E-10 76.4 7.5 81 227-308 141-240 (332)
92 PRK07574 formate dehydrogenase 97.8 2.2E-05 4.8E-10 79.8 5.8 135 228-365 188-357 (385)
93 PRK15469 ghrA bifunctional gly 97.8 3.5E-05 7.7E-10 76.2 7.0 80 228-308 132-230 (312)
94 PRK12480 D-lactate dehydrogena 97.8 3.1E-05 6.6E-10 77.2 6.4 80 228-308 142-238 (330)
95 KOG1370 S-adenosylhomocysteine 97.8 3.8E-05 8.3E-10 75.6 6.8 85 224-309 206-306 (434)
96 COG0111 SerA Phosphoglycerate 97.8 4E-05 8.7E-10 76.3 6.8 138 226-365 136-306 (324)
97 PRK15409 bifunctional glyoxyla 97.8 5E-05 1.1E-09 75.4 6.7 136 227-365 140-309 (323)
98 PLN02306 hydroxypyruvate reduc 97.8 5.2E-05 1.1E-09 77.1 6.8 81 227-308 160-276 (386)
99 PRK08291 ectoine utilization p 97.7 0.00011 2.3E-09 73.0 8.7 89 215-306 117-229 (330)
100 PF01262 AlaDh_PNT_C: Alanine 97.7 2.7E-05 5.9E-10 69.8 3.8 77 230-307 18-142 (168)
101 PLN03139 formate dehydrogenase 97.7 8.8E-05 1.9E-09 75.5 6.8 136 228-365 195-364 (386)
102 PRK11790 D-3-phosphoglycerate 97.7 8.5E-05 1.8E-09 76.1 6.7 81 227-308 146-243 (409)
103 PRK06719 precorrin-2 dehydroge 97.6 7.8E-05 1.7E-09 66.7 5.5 59 228-287 9-82 (157)
104 TIGR01327 PGDH D-3-phosphoglyc 97.6 0.00011 2.3E-09 77.6 7.1 81 227-308 133-233 (525)
105 PRK08618 ornithine cyclodeamin 97.6 0.00026 5.6E-09 70.1 9.1 75 231-307 126-224 (325)
106 PF03446 NAD_binding_2: NAD bi 97.6 8.5E-05 1.8E-09 66.1 5.1 74 233-307 2-97 (163)
107 PRK06141 ornithine cyclodeamin 97.6 0.00028 6E-09 69.7 8.9 77 229-306 122-221 (314)
108 PRK13581 D-3-phosphoglycerate 97.6 0.00014 3.1E-09 76.6 7.2 81 227-308 135-234 (526)
109 PRK07340 ornithine cyclodeamin 97.5 0.00053 1.1E-08 67.5 9.9 78 228-307 121-220 (304)
110 PF13241 NAD_binding_7: Putati 97.5 0.00011 2.3E-09 61.0 4.3 60 228-288 3-73 (103)
111 PF08501 Shikimate_dh_N: Shiki 97.5 0.00011 2.3E-09 58.9 4.1 68 123-198 13-81 (83)
112 COG1052 LdhA Lactate dehydroge 97.5 0.0002 4.3E-09 71.4 6.4 81 227-308 141-240 (324)
113 PRK09424 pntA NAD(P) transhydr 97.5 0.0003 6.5E-09 74.1 7.9 90 217-307 140-288 (509)
114 PRK12862 malic enzyme; Reviewe 97.4 0.00083 1.8E-08 73.9 10.2 172 119-308 94-295 (763)
115 COG1748 LYS9 Saccharopine dehy 97.4 0.00028 6.1E-09 71.9 6.1 110 233-359 2-139 (389)
116 KOG0069 Glyoxylate/hydroxypyru 97.4 0.00034 7.3E-09 70.0 6.2 81 227-308 157-257 (336)
117 PRK07232 bifunctional malic en 97.3 0.0017 3.7E-08 71.2 11.5 172 119-308 86-287 (752)
118 PRK14619 NAD(P)H-dependent gly 97.3 0.00053 1.1E-08 67.2 6.9 73 231-304 3-82 (308)
119 PRK11199 tyrA bifunctional cho 97.3 0.00044 9.5E-09 69.9 6.4 75 231-306 97-177 (374)
120 COG2084 MmsB 3-hydroxyisobutyr 97.3 0.00051 1.1E-08 67.4 6.4 74 233-307 1-98 (286)
121 COG0281 SfcA Malic enzyme [Ene 97.2 0.0014 3.1E-08 67.1 9.3 174 117-308 98-303 (432)
122 TIGR01470 cysG_Nterm siroheme 97.2 0.0013 2.7E-08 61.4 7.4 113 228-358 5-141 (205)
123 PRK14804 ornithine carbamoyltr 97.1 0.061 1.3E-06 53.4 19.4 148 116-282 53-225 (311)
124 COG1648 CysG Siroheme synthase 97.1 0.00062 1.3E-08 63.9 4.6 116 228-361 8-147 (210)
125 PF01210 NAD_Gly3P_dh_N: NAD-d 97.1 0.00085 1.9E-08 59.5 5.2 69 234-303 1-102 (157)
126 PRK01438 murD UDP-N-acetylmura 97.0 0.0018 3.9E-08 66.9 8.1 132 223-361 7-147 (480)
127 TIGR01505 tartro_sem_red 2-hyd 97.0 0.0012 2.6E-08 63.9 6.4 72 234-306 1-95 (291)
128 TIGR02371 ala_DH_arch alanine 97.0 0.0015 3.3E-08 64.8 6.9 75 231-306 127-224 (325)
129 PLN02712 arogenate dehydrogena 97.0 0.0014 3E-08 71.3 7.0 81 225-306 362-462 (667)
130 PRK12861 malic enzyme; Reviewe 97.0 0.0022 4.7E-08 70.5 8.5 168 120-308 91-291 (764)
131 PRK13403 ketol-acid reductoiso 97.0 0.0015 3.2E-08 65.3 6.3 77 229-306 13-109 (335)
132 PRK11559 garR tartronate semia 97.0 0.0018 4E-08 62.6 6.9 74 233-307 3-99 (296)
133 PF03807 F420_oxidored: NADP o 97.0 0.00074 1.6E-08 54.2 3.4 70 234-304 1-94 (96)
134 PRK15461 NADH-dependent gamma- 96.9 0.0015 3.3E-08 63.7 6.0 75 233-308 2-99 (296)
135 PRK12562 ornithine carbamoyltr 96.9 0.064 1.4E-06 53.9 17.6 142 123-283 61-233 (334)
136 TIGR00670 asp_carb_tr aspartat 96.9 0.075 1.6E-06 52.6 17.8 157 106-282 40-223 (301)
137 PLN02256 arogenate dehydrogena 96.9 0.0026 5.6E-08 62.8 7.3 80 225-305 29-128 (304)
138 COG2085 Predicted dinucleotide 96.9 0.0014 3E-08 61.6 5.0 72 233-307 2-95 (211)
139 PRK01713 ornithine carbamoyltr 96.9 0.019 4E-07 57.6 13.2 146 116-282 56-232 (334)
140 PLN02342 ornithine carbamoyltr 96.9 0.082 1.8E-06 53.4 17.8 188 75-283 47-267 (348)
141 COG0287 TyrA Prephenate dehydr 96.8 0.0026 5.6E-08 62.2 6.7 74 232-306 3-100 (279)
142 PRK04284 ornithine carbamoyltr 96.8 0.022 4.8E-07 57.0 13.4 154 107-282 47-231 (332)
143 PRK03515 ornithine carbamoyltr 96.8 0.021 4.6E-07 57.3 13.1 140 123-282 61-232 (336)
144 PRK02255 putrescine carbamoylt 96.8 0.025 5.4E-07 56.8 13.6 178 106-304 43-272 (338)
145 PRK06407 ornithine cyclodeamin 96.8 0.0033 7.1E-08 62.0 6.9 76 231-307 116-215 (301)
146 PRK14805 ornithine carbamoyltr 96.7 0.098 2.1E-06 51.8 16.9 147 116-283 48-222 (302)
147 PRK07502 cyclohexadienyl dehyd 96.7 0.0022 4.8E-08 62.6 5.3 74 232-306 6-102 (307)
148 PRK02102 ornithine carbamoyltr 96.7 0.041 8.9E-07 55.2 14.2 156 106-282 47-231 (331)
149 PRK07417 arogenate dehydrogena 96.7 0.0018 3.8E-08 62.6 4.2 72 234-306 2-93 (279)
150 cd05312 NAD_bind_1_malic_enz N 96.6 0.0034 7.3E-08 61.5 6.0 92 214-307 7-142 (279)
151 PRK13814 pyrB aspartate carbam 96.6 0.069 1.5E-06 53.1 14.8 149 115-281 54-223 (310)
152 PRK11064 wecC UDP-N-acetyl-D-m 96.6 0.0037 8.1E-08 64.1 6.1 74 233-307 4-122 (415)
153 TIGR00658 orni_carb_tr ornithi 96.6 0.036 7.8E-07 54.8 12.6 155 107-282 41-223 (304)
154 PRK06046 alanine dehydrogenase 96.6 0.0057 1.2E-07 60.7 7.0 74 231-306 128-225 (326)
155 PF07991 IlvN: Acetohydroxy ac 96.5 0.0041 8.8E-08 56.4 5.4 76 230-306 2-98 (165)
156 TIGR01692 HIBADH 3-hydroxyisob 96.5 0.0042 9.2E-08 60.2 5.8 70 237-307 1-93 (288)
157 PRK06823 ornithine cyclodeamin 96.5 0.0057 1.2E-07 60.7 6.8 76 231-307 127-225 (315)
158 PRK06545 prephenate dehydrogen 96.5 0.0045 9.8E-08 62.1 6.1 73 233-306 1-97 (359)
159 PRK12490 6-phosphogluconate de 96.5 0.0066 1.4E-07 59.3 6.9 72 234-306 2-96 (299)
160 cd00762 NAD_bind_malic_enz NAD 96.5 0.0037 8.1E-08 60.4 5.0 91 215-307 8-143 (254)
161 PRK05579 bifunctional phosphop 96.5 0.019 4.1E-07 58.9 10.4 94 215-308 169-306 (399)
162 PRK08818 prephenate dehydrogen 96.5 0.0048 1E-07 62.7 6.0 76 231-306 3-90 (370)
163 PF02423 OCD_Mu_crystall: Orni 96.5 0.007 1.5E-07 59.8 7.0 76 231-307 127-227 (313)
164 PRK11891 aspartate carbamoyltr 96.4 0.057 1.2E-06 55.9 13.7 190 76-284 90-317 (429)
165 PRK15059 tartronate semialdehy 96.4 0.0052 1.1E-07 60.1 5.9 73 234-307 2-96 (292)
166 PRK00856 pyrB aspartate carbam 96.4 0.073 1.6E-06 52.8 13.7 149 118-283 56-221 (305)
167 PLN02527 aspartate carbamoyltr 96.4 0.078 1.7E-06 52.6 13.9 151 115-283 48-226 (306)
168 PRK14031 glutamate dehydrogena 96.4 0.027 5.9E-07 58.5 11.0 52 211-263 203-258 (444)
169 PF01118 Semialdhyde_dh: Semia 96.4 0.0038 8.3E-08 52.9 3.9 74 234-307 1-100 (121)
170 PF00056 Ldh_1_N: lactate/mala 96.4 0.0072 1.6E-07 53.0 5.7 53 234-286 2-80 (141)
171 PRK05562 precorrin-2 dehydroge 96.3 0.0081 1.8E-07 57.0 6.4 60 228-288 21-98 (223)
172 PF03949 Malic_M: Malic enzyme 96.3 0.0059 1.3E-07 59.1 5.0 91 215-307 8-143 (255)
173 TIGR03316 ygeW probable carbam 96.2 0.084 1.8E-06 53.5 13.4 165 106-282 43-252 (357)
174 PRK08192 aspartate carbamoyltr 96.2 0.08 1.7E-06 53.2 13.1 151 115-283 53-234 (338)
175 PRK00421 murC UDP-N-acetylmura 96.2 0.0085 1.8E-07 61.8 6.3 123 230-361 5-132 (461)
176 PRK13529 malate dehydrogenase; 96.2 0.022 4.9E-07 60.6 9.3 139 148-304 228-417 (563)
177 PRK08655 prephenate dehydrogen 96.2 0.01 2.2E-07 61.4 6.6 72 234-305 2-93 (437)
178 PRK03369 murD UDP-N-acetylmura 96.2 0.0086 1.9E-07 62.5 6.2 126 230-361 10-142 (488)
179 PRK14106 murD UDP-N-acetylmura 96.2 0.0095 2.1E-07 60.8 6.3 37 229-266 2-38 (450)
180 PRK14618 NAD(P)H-dependent gly 96.1 0.0099 2.1E-07 58.5 6.0 72 233-305 5-105 (328)
181 PRK00779 ornithine carbamoyltr 96.1 0.15 3.3E-06 50.5 14.3 147 118-282 54-224 (304)
182 PRK12491 pyrroline-5-carboxyla 96.1 0.0093 2E-07 57.8 5.7 71 233-305 3-98 (272)
183 TIGR00872 gnd_rel 6-phosphoglu 96.1 0.009 1.9E-07 58.4 5.6 73 234-307 2-96 (298)
184 PRK08507 prephenate dehydrogen 96.1 0.012 2.5E-07 56.6 6.3 70 234-306 2-93 (275)
185 PRK09599 6-phosphogluconate de 96.1 0.014 3.1E-07 56.9 7.0 73 234-307 2-97 (301)
186 PRK02472 murD UDP-N-acetylmura 96.1 0.014 3.1E-07 59.5 7.2 126 229-361 2-133 (447)
187 PF10727 Rossmann-like: Rossma 96.1 0.0089 1.9E-07 51.9 4.8 72 232-304 10-104 (127)
188 PRK07679 pyrroline-5-carboxyla 96.1 0.012 2.6E-07 56.8 6.2 71 232-303 3-98 (279)
189 PRK05479 ketol-acid reductoiso 96.1 0.012 2.6E-07 59.0 6.3 70 230-300 15-104 (330)
190 PRK00094 gpsA NAD(P)H-dependen 96.1 0.012 2.6E-07 57.1 6.2 71 233-304 2-105 (325)
191 PRK07589 ornithine cyclodeamin 96.0 0.015 3.3E-07 58.5 6.9 76 231-307 128-228 (346)
192 TIGR03026 NDP-sugDHase nucleot 96.0 0.016 3.5E-07 59.0 7.2 72 234-306 2-122 (411)
193 PRK07200 aspartate/ornithine c 96.0 0.18 3.8E-06 51.9 14.5 167 106-283 60-270 (395)
194 cd05291 HicDH_like L-2-hydroxy 96.0 0.015 3.2E-07 57.1 6.5 53 233-286 1-79 (306)
195 PRK09260 3-hydroxybutyryl-CoA 96.0 0.013 2.8E-07 56.8 6.0 73 233-306 2-120 (288)
196 PLN02688 pyrroline-5-carboxyla 96.0 0.016 3.4E-07 55.2 6.3 68 234-303 2-94 (266)
197 PLN03129 NADP-dependent malic 95.9 0.024 5.1E-07 60.6 7.9 94 213-308 302-439 (581)
198 PRK06949 short chain dehydroge 95.9 0.012 2.7E-07 54.5 5.0 39 228-266 5-43 (258)
199 PRK10637 cysG siroheme synthas 95.8 0.015 3.2E-07 60.5 5.8 113 228-358 8-144 (457)
200 PRK06398 aldose dehydrogenase; 95.8 0.02 4.4E-07 53.8 6.2 37 229-265 3-39 (258)
201 TIGR00465 ilvC ketol-acid redu 95.8 0.021 4.5E-07 56.8 6.5 55 230-285 1-69 (314)
202 PF13460 NAD_binding_10: NADH( 95.8 0.016 3.4E-07 51.2 5.1 51 235-285 1-70 (183)
203 PF03721 UDPG_MGDP_dh_N: UDP-g 95.8 0.012 2.7E-07 53.9 4.5 53 233-286 1-87 (185)
204 PRK14030 glutamate dehydrogena 95.7 0.1 2.3E-06 54.3 11.7 50 212-262 204-257 (445)
205 PRK00141 murD UDP-N-acetylmura 95.7 0.019 4.1E-07 59.7 6.1 128 229-361 12-146 (473)
206 PLN02545 3-hydroxybutyryl-CoA 95.7 0.013 2.9E-07 56.7 4.7 72 233-305 5-121 (295)
207 cd01076 NAD_bind_1_Glu_DH NAD( 95.7 0.026 5.7E-07 53.5 6.5 52 212-264 7-63 (227)
208 PLN02586 probable cinnamyl alc 95.7 0.038 8.3E-07 55.0 8.0 93 213-306 165-280 (360)
209 PRK09414 glutamate dehydrogena 95.7 0.13 2.7E-06 53.7 11.9 51 211-262 207-261 (445)
210 PRK01710 murD UDP-N-acetylmura 95.7 0.034 7.5E-07 57.4 7.8 35 230-265 12-46 (458)
211 PRK06523 short chain dehydroge 95.6 0.027 5.8E-07 52.5 6.3 38 228-265 5-42 (260)
212 TIGR01915 npdG NADPH-dependent 95.6 0.022 4.7E-07 53.1 5.6 69 234-304 2-101 (219)
213 PRK09072 short chain dehydroge 95.6 0.017 3.7E-07 54.1 5.0 38 229-266 2-39 (263)
214 cd05313 NAD_bind_2_Glu_DH NAD( 95.6 0.029 6.2E-07 54.3 6.5 53 211-264 13-70 (254)
215 PRK06550 fabG 3-ketoacyl-(acyl 95.6 0.027 5.8E-07 51.5 6.1 57 229-285 2-77 (235)
216 PRK12367 short chain dehydroge 95.6 0.024 5.3E-07 53.6 5.8 57 229-285 11-89 (245)
217 COG0771 MurD UDP-N-acetylmuram 95.5 0.036 7.7E-07 57.7 7.4 126 230-362 5-136 (448)
218 PLN02712 arogenate dehydrogena 95.5 0.022 4.8E-07 62.0 6.1 76 230-306 50-145 (667)
219 COG3288 PntA NAD/NADP transhyd 95.5 0.052 1.1E-06 54.0 7.9 135 217-362 139-331 (356)
220 PLN02350 phosphogluconate dehy 95.4 0.027 5.9E-07 59.3 6.2 73 234-307 8-110 (493)
221 PLN02858 fructose-bisphosphate 95.4 0.021 4.5E-07 66.9 5.8 76 231-307 3-101 (1378)
222 PRK08293 3-hydroxybutyryl-CoA 95.4 0.033 7.1E-07 53.9 6.3 73 233-306 4-122 (287)
223 PRK00066 ldh L-lactate dehydro 95.4 0.04 8.7E-07 54.6 6.9 55 231-286 5-84 (315)
224 PTZ00117 malate dehydrogenase; 95.3 0.047 1E-06 54.1 7.2 56 230-287 3-85 (319)
225 PLN02968 Probable N-acetyl-gam 95.3 0.021 4.4E-07 58.3 4.7 76 231-308 37-138 (381)
226 PRK12828 short chain dehydroge 95.3 0.023 5E-07 51.6 4.6 38 229-266 4-41 (239)
227 PRK07680 late competence prote 95.3 0.03 6.6E-07 53.7 5.5 70 234-305 2-97 (273)
228 PRK06199 ornithine cyclodeamin 95.3 0.037 8.1E-07 56.4 6.4 76 231-307 154-262 (379)
229 cd05211 NAD_bind_Glu_Leu_Phe_V 95.3 0.044 9.5E-07 51.7 6.5 49 217-266 8-57 (217)
230 PRK04523 N-acetylornithine car 95.3 1 2.2E-05 45.3 16.5 191 76-283 6-252 (335)
231 PLN02477 glutamate dehydrogena 95.3 0.038 8.3E-07 56.9 6.5 53 212-265 182-239 (410)
232 PRK07523 gluconate 5-dehydroge 95.3 0.017 3.8E-07 53.7 3.7 38 229-266 7-44 (255)
233 PRK08862 short chain dehydroge 95.3 0.019 4.1E-07 53.5 3.9 39 229-267 2-40 (227)
234 PRK14874 aspartate-semialdehyd 95.2 0.02 4.3E-07 57.1 4.2 76 232-307 1-97 (334)
235 PRK12809 putative oxidoreducta 95.2 0.094 2E-06 56.7 9.7 34 231-265 309-342 (639)
236 PTZ00142 6-phosphogluconate de 95.2 0.037 8E-07 58.0 6.4 73 233-306 2-103 (470)
237 COG2423 Predicted ornithine cy 95.2 0.062 1.4E-06 53.9 7.7 76 231-307 129-228 (330)
238 PRK05866 short chain dehydroge 95.2 0.033 7.1E-07 53.9 5.5 40 227-266 35-74 (293)
239 PRK07530 3-hydroxybutyryl-CoA 95.2 0.027 5.8E-07 54.6 4.8 70 233-304 5-120 (292)
240 TIGR02356 adenyl_thiF thiazole 95.2 0.019 4.2E-07 53.1 3.7 36 229-265 18-54 (202)
241 PRK06124 gluconate 5-dehydroge 95.1 0.021 4.6E-07 53.0 3.9 39 228-266 7-45 (256)
242 PRK01368 murD UDP-N-acetylmura 95.1 0.045 9.8E-07 56.8 6.6 123 231-361 5-129 (454)
243 PRK04690 murD UDP-N-acetylmura 95.1 0.052 1.1E-06 56.4 7.0 126 230-361 6-140 (468)
244 PRK07424 bifunctional sterol d 95.1 0.042 9.1E-07 56.5 6.2 39 228-266 174-212 (406)
245 PRK07231 fabG 3-ketoacyl-(acyl 95.1 0.025 5.5E-07 51.9 4.1 38 229-266 2-39 (251)
246 PRK06130 3-hydroxybutyryl-CoA 95.0 0.042 9.2E-07 53.5 5.8 53 233-286 5-90 (311)
247 PRK06444 prephenate dehydrogen 95.0 0.024 5.3E-07 52.7 3.9 59 234-306 2-61 (197)
248 PLN02858 fructose-bisphosphate 95.0 0.034 7.4E-07 65.1 5.9 73 233-306 325-420 (1378)
249 COG0569 TrkA K+ transport syst 95.0 0.036 7.8E-07 52.3 5.1 52 233-285 1-76 (225)
250 COG0078 ArgF Ornithine carbamo 95.0 0.096 2.1E-06 51.9 8.1 139 124-283 61-229 (310)
251 PRK12939 short chain dehydroge 95.0 0.048 1E-06 50.1 5.7 37 229-265 4-40 (250)
252 PRK06171 sorbitol-6-phosphate 94.9 0.058 1.2E-06 50.5 6.3 37 229-265 6-42 (266)
253 PF04127 DFP: DNA / pantothena 94.9 0.041 8.9E-07 50.7 5.1 79 230-308 1-122 (185)
254 PRK08085 gluconate 5-dehydroge 94.9 0.026 5.6E-07 52.5 3.8 38 229-266 6-43 (254)
255 PLN02353 probable UDP-glucose 94.9 0.15 3.3E-06 53.5 9.8 156 119-303 227-446 (473)
256 PRK08229 2-dehydropantoate 2-r 94.9 0.06 1.3E-06 53.0 6.5 70 233-304 3-107 (341)
257 PRK08339 short chain dehydroge 94.9 0.026 5.6E-07 53.4 3.7 38 228-265 4-41 (263)
258 PTZ00317 NADP-dependent malic 94.9 0.059 1.3E-06 57.4 6.7 96 210-307 275-418 (559)
259 KOG1494 NAD-dependent malate d 94.9 0.03 6.6E-07 55.1 4.2 58 229-287 25-108 (345)
260 PRK06728 aspartate-semialdehyd 94.9 0.12 2.6E-06 52.2 8.6 113 231-354 4-139 (347)
261 KOG0068 D-3-phosphoglycerate d 94.9 0.048 1E-06 54.9 5.6 170 119-306 13-238 (406)
262 cd00757 ThiF_MoeB_HesA_family 94.9 0.023 5E-07 53.4 3.3 77 229-306 18-145 (228)
263 PF02737 3HCDH_N: 3-hydroxyacy 94.8 0.051 1.1E-06 49.5 5.4 31 234-265 1-31 (180)
264 TIGR00521 coaBC_dfp phosphopan 94.8 0.11 2.5E-06 53.1 8.5 95 213-307 163-303 (390)
265 PRK07062 short chain dehydroge 94.8 0.033 7.1E-07 52.1 4.1 39 228-266 4-42 (265)
266 TIGR01832 kduD 2-deoxy-D-gluco 94.8 0.042 9.2E-07 50.7 4.8 37 229-265 2-38 (248)
267 PRK07063 short chain dehydroge 94.8 0.031 6.7E-07 52.1 4.0 37 229-265 4-40 (260)
268 TIGR02825 B4_12hDH leukotriene 94.8 0.064 1.4E-06 51.9 6.2 93 213-305 120-238 (325)
269 PRK06172 short chain dehydroge 94.8 0.031 6.7E-07 51.8 3.9 38 229-266 4-41 (253)
270 PLN02253 xanthoxin dehydrogena 94.8 0.055 1.2E-06 51.1 5.6 37 229-265 15-51 (280)
271 PRK06138 short chain dehydroge 94.8 0.035 7.5E-07 51.2 4.2 38 229-266 2-39 (252)
272 TIGR00873 gnd 6-phosphoglucona 94.7 0.034 7.4E-07 58.1 4.5 72 234-306 1-100 (467)
273 PRK05867 short chain dehydroge 94.7 0.03 6.5E-07 52.1 3.7 38 229-266 6-43 (253)
274 cd01492 Aos1_SUMO Ubiquitin ac 94.7 0.14 3E-06 47.4 8.0 36 229-265 18-54 (197)
275 TIGR03325 BphB_TodD cis-2,3-di 94.7 0.041 8.9E-07 51.6 4.6 37 229-265 2-38 (262)
276 PRK12829 short chain dehydroge 94.7 0.049 1.1E-06 50.5 5.1 37 229-265 8-44 (264)
277 PRK08213 gluconate 5-dehydroge 94.7 0.037 8E-07 51.6 4.2 39 228-266 8-46 (259)
278 PRK06057 short chain dehydroge 94.7 0.035 7.5E-07 51.8 4.0 38 229-266 4-41 (255)
279 PRK06463 fabG 3-ketoacyl-(acyl 94.7 0.065 1.4E-06 49.9 5.8 37 229-265 4-40 (255)
280 PRK08265 short chain dehydroge 94.7 0.04 8.7E-07 51.8 4.5 38 229-266 3-40 (261)
281 PRK06935 2-deoxy-D-gluconate 3 94.7 0.052 1.1E-06 50.6 5.2 38 228-265 11-48 (258)
282 PRK08628 short chain dehydroge 94.7 0.047 1E-06 50.8 4.8 39 227-265 2-40 (258)
283 PRK12769 putative oxidoreducta 94.6 0.2 4.4E-06 54.2 10.3 35 230-265 325-359 (654)
284 PRK05717 oxidoreductase; Valid 94.6 0.04 8.6E-07 51.4 4.2 39 227-265 5-43 (255)
285 TIGR02355 moeB molybdopterin s 94.6 0.047 1E-06 52.1 4.7 35 229-264 21-56 (240)
286 PRK09880 L-idonate 5-dehydroge 94.6 0.14 3E-06 50.3 8.2 82 223-306 162-268 (343)
287 TIGR03366 HpnZ_proposed putati 94.6 0.075 1.6E-06 50.7 6.1 92 213-306 103-220 (280)
288 TIGR01850 argC N-acetyl-gamma- 94.5 0.058 1.3E-06 54.1 5.4 75 233-307 1-102 (346)
289 COG0240 GpsA Glycerol-3-phosph 94.5 0.084 1.8E-06 52.9 6.4 71 233-304 2-105 (329)
290 PRK08220 2,3-dihydroxybenzoate 94.5 0.079 1.7E-06 48.9 6.0 38 228-265 4-41 (252)
291 PRK07890 short chain dehydroge 94.5 0.037 8E-07 51.3 3.7 36 230-265 3-38 (258)
292 PTZ00082 L-lactate dehydrogena 94.5 0.1 2.2E-06 51.9 7.1 56 230-287 4-86 (321)
293 cd08292 ETR_like_2 2-enoyl thi 94.5 0.14 3.1E-06 48.8 7.9 93 213-306 122-240 (324)
294 TIGR01851 argC_other N-acetyl- 94.5 0.06 1.3E-06 53.6 5.4 75 233-307 2-83 (310)
295 PRK06129 3-hydroxyacyl-CoA deh 94.5 0.073 1.6E-06 52.1 5.9 53 233-286 3-93 (308)
296 cd08294 leukotriene_B4_DH_like 94.5 0.11 2.3E-06 49.9 7.0 93 213-305 125-242 (329)
297 PRK15057 UDP-glucose 6-dehydro 94.5 0.085 1.8E-06 53.9 6.5 71 234-307 2-120 (388)
298 cd00650 LDH_MDH_like NAD-depen 94.5 0.083 1.8E-06 50.6 6.1 53 235-287 1-82 (263)
299 PRK06035 3-hydroxyacyl-CoA deh 94.5 0.056 1.2E-06 52.4 5.0 32 233-265 4-35 (291)
300 PRK08223 hypothetical protein; 94.5 0.075 1.6E-06 52.3 5.9 35 229-264 24-59 (287)
301 PRK06476 pyrroline-5-carboxyla 94.4 0.059 1.3E-06 51.3 5.0 71 234-305 2-94 (258)
302 PRK05872 short chain dehydroge 94.4 0.038 8.3E-07 53.2 3.8 39 228-266 5-43 (296)
303 PLN02986 cinnamyl-alcohol dehy 94.4 0.11 2.4E-06 50.3 6.9 36 230-265 3-38 (322)
304 TIGR02354 thiF_fam2 thiamine b 94.4 0.068 1.5E-06 49.7 5.2 36 229-265 18-54 (200)
305 PRK06182 short chain dehydroge 94.4 0.073 1.6E-06 50.2 5.5 35 231-265 2-36 (273)
306 PLN02514 cinnamyl-alcohol dehy 94.4 0.11 2.4E-06 51.5 7.0 93 213-306 162-277 (357)
307 PRK09186 flagellin modificatio 94.4 0.049 1.1E-06 50.4 4.2 37 230-266 2-38 (256)
308 PRK06841 short chain dehydroge 94.4 0.066 1.4E-06 49.6 5.1 38 228-265 11-48 (255)
309 smart00859 Semialdhyde_dh Semi 94.4 0.063 1.4E-06 45.1 4.5 74 234-307 1-102 (122)
310 COG1004 Ugd Predicted UDP-gluc 94.4 0.39 8.4E-06 49.4 10.9 134 150-302 219-406 (414)
311 TIGR03589 PseB UDP-N-acetylglu 94.3 0.075 1.6E-06 52.1 5.7 36 230-265 2-39 (324)
312 PRK12475 thiamine/molybdopteri 94.3 0.068 1.5E-06 53.6 5.4 36 228-264 20-56 (338)
313 PRK12936 3-ketoacyl-(acyl-carr 94.3 0.077 1.7E-06 48.5 5.3 37 229-265 3-39 (245)
314 cd08295 double_bond_reductase_ 94.3 0.12 2.6E-06 50.3 7.0 93 213-305 133-252 (338)
315 TIGR01724 hmd_rel H2-forming N 94.3 0.074 1.6E-06 53.3 5.4 63 245-307 32-119 (341)
316 PRK08703 short chain dehydroge 94.3 0.068 1.5E-06 49.2 4.9 38 229-266 3-40 (239)
317 PRK06125 short chain dehydroge 94.2 0.061 1.3E-06 50.2 4.6 37 229-265 4-40 (259)
318 PRK09291 short chain dehydroge 94.2 0.073 1.6E-06 49.3 5.1 34 232-265 2-35 (257)
319 PRK07066 3-hydroxybutyryl-CoA 94.2 0.11 2.4E-06 51.8 6.7 73 233-307 8-121 (321)
320 PRK08264 short chain dehydroge 94.2 0.063 1.4E-06 49.2 4.6 38 229-266 3-41 (238)
321 PRK07097 gluconate 5-dehydroge 94.2 0.052 1.1E-06 51.0 4.1 39 228-266 6-44 (265)
322 TIGR01963 PHB_DH 3-hydroxybuty 94.2 0.093 2E-06 48.3 5.7 35 232-266 1-35 (255)
323 PRK07774 short chain dehydroge 94.2 0.063 1.4E-06 49.5 4.6 38 229-266 3-40 (250)
324 PRK09242 tropinone reductase; 94.2 0.044 9.6E-07 51.0 3.6 39 228-266 5-43 (257)
325 PRK07478 short chain dehydroge 94.2 0.051 1.1E-06 50.5 3.9 38 229-266 3-40 (254)
326 PRK08993 2-deoxy-D-gluconate 3 94.2 0.1 2.2E-06 48.7 6.0 36 229-264 7-42 (253)
327 PRK13394 3-hydroxybutyrate deh 94.2 0.056 1.2E-06 50.1 4.2 38 229-266 4-41 (262)
328 PRK05690 molybdopterin biosynt 94.2 0.072 1.6E-06 50.9 5.0 34 229-263 29-63 (245)
329 PRK14806 bifunctional cyclohex 94.2 0.071 1.5E-06 58.2 5.6 73 233-306 4-99 (735)
330 KOG1198 Zinc-binding oxidoredu 94.2 0.22 4.9E-06 50.1 8.7 78 211-288 131-238 (347)
331 PRK07035 short chain dehydroge 94.2 0.049 1.1E-06 50.5 3.7 38 229-266 5-42 (252)
332 PRK12826 3-ketoacyl-(acyl-carr 94.1 0.057 1.2E-06 49.5 4.1 36 230-265 4-39 (251)
333 PRK07060 short chain dehydroge 94.1 0.064 1.4E-06 49.2 4.5 39 228-266 5-43 (245)
334 PLN02178 cinnamyl-alcohol dehy 94.1 0.14 3.1E-06 51.5 7.3 93 213-306 159-275 (375)
335 PRK08416 7-alpha-hydroxysteroi 94.1 0.064 1.4E-06 50.3 4.5 37 228-264 4-40 (260)
336 CHL00194 ycf39 Ycf39; Provisio 94.1 0.088 1.9E-06 51.2 5.7 51 234-284 2-73 (317)
337 PRK06196 oxidoreductase; Provi 94.1 0.054 1.2E-06 52.6 4.1 39 227-265 21-59 (315)
338 PF05368 NmrA: NmrA-like famil 94.1 0.081 1.8E-06 48.9 5.1 52 235-286 1-75 (233)
339 COG2910 Putative NADH-flavin r 94.1 0.11 2.5E-06 48.3 5.9 54 233-286 1-73 (211)
340 PRK05854 short chain dehydroge 94.1 0.049 1.1E-06 53.1 3.8 38 228-265 10-47 (313)
341 PRK07825 short chain dehydroge 94.1 0.053 1.1E-06 51.1 3.8 38 229-266 2-39 (273)
342 PRK12743 oxidoreductase; Provi 94.1 0.11 2.5E-06 48.4 6.1 35 231-265 1-35 (256)
343 PF13738 Pyr_redox_3: Pyridine 94.1 0.072 1.6E-06 47.7 4.5 37 229-266 164-200 (203)
344 PRK06179 short chain dehydroge 94.1 0.1 2.2E-06 48.9 5.8 35 231-265 3-37 (270)
345 PRK15182 Vi polysaccharide bio 94.1 0.11 2.5E-06 53.6 6.5 74 233-308 7-124 (425)
346 PRK06200 2,3-dihydroxy-2,3-dih 94.0 0.054 1.2E-06 50.7 3.8 36 230-265 4-39 (263)
347 PRK05876 short chain dehydroge 94.0 0.051 1.1E-06 51.9 3.8 37 229-265 3-39 (275)
348 PTZ00079 NADP-specific glutama 94.0 0.12 2.5E-06 54.0 6.5 52 213-265 214-270 (454)
349 PRK07531 bifunctional 3-hydrox 94.0 0.11 2.4E-06 54.6 6.5 53 233-286 5-91 (495)
350 PRK01390 murD UDP-N-acetylmura 94.0 0.1 2.2E-06 53.7 6.1 35 230-265 7-41 (460)
351 PLN02662 cinnamyl-alcohol dehy 94.0 0.13 2.8E-06 49.4 6.5 35 231-265 3-37 (322)
352 PLN02383 aspartate semialdehyd 94.0 0.08 1.7E-06 53.3 5.2 77 231-307 6-103 (344)
353 PRK15181 Vi polysaccharide bio 94.0 0.14 3E-06 50.6 6.8 39 226-264 9-47 (348)
354 PLN02427 UDP-apiose/xylose syn 94.0 0.11 2.4E-06 51.8 6.2 59 226-284 8-95 (386)
355 PRK08589 short chain dehydroge 94.0 0.061 1.3E-06 50.9 4.2 37 229-265 3-39 (272)
356 PRK02006 murD UDP-N-acetylmura 94.0 0.13 2.7E-06 53.8 6.8 126 230-361 5-146 (498)
357 TIGR01763 MalateDH_bact malate 94.0 0.14 3.1E-06 50.5 6.8 53 233-287 2-81 (305)
358 PRK08936 glucose-1-dehydrogena 94.0 0.07 1.5E-06 49.9 4.5 37 229-265 4-40 (261)
359 PRK06194 hypothetical protein; 94.0 0.062 1.4E-06 50.9 4.2 37 229-265 3-39 (287)
360 PF00899 ThiF: ThiF family; I 94.0 0.077 1.7E-06 45.5 4.3 34 231-265 1-35 (135)
361 PRK08277 D-mannonate oxidoredu 94.0 0.056 1.2E-06 51.0 3.8 38 228-265 6-43 (278)
362 TIGR01202 bchC 2-desacetyl-2-h 93.9 0.15 3.2E-06 49.6 6.8 76 230-306 143-233 (308)
363 PRK06223 malate dehydrogenase; 93.9 0.15 3.2E-06 49.7 6.8 53 233-287 3-82 (307)
364 PRK07856 short chain dehydroge 93.9 0.094 2E-06 48.8 5.2 37 229-265 3-39 (252)
365 cd05292 LDH_2 A subgroup of L- 93.9 0.13 2.8E-06 50.7 6.4 52 234-286 2-78 (308)
366 PRK07576 short chain dehydroge 93.9 0.07 1.5E-06 50.3 4.4 37 229-265 6-42 (264)
367 cd08293 PTGR2 Prostaglandin re 93.9 0.14 3E-06 49.7 6.5 74 232-305 155-255 (345)
368 cd05188 MDR Medium chain reduc 93.9 0.18 3.8E-06 46.3 6.9 94 213-307 116-235 (271)
369 PRK07067 sorbitol dehydrogenas 93.9 0.062 1.3E-06 50.0 3.9 37 230-266 4-40 (257)
370 PRK07819 3-hydroxybutyryl-CoA 93.9 0.13 2.9E-06 50.1 6.4 72 233-306 6-123 (286)
371 PRK08040 putative semialdehyde 93.9 0.067 1.4E-06 53.8 4.3 77 231-307 3-100 (336)
372 PRK12429 3-hydroxybutyrate deh 93.9 0.081 1.8E-06 48.8 4.6 37 230-266 2-38 (258)
373 PRK05225 ketol-acid reductoiso 93.9 0.056 1.2E-06 56.5 3.8 78 229-307 33-135 (487)
374 PRK04308 murD UDP-N-acetylmura 93.8 0.14 3.1E-06 52.4 6.8 124 230-361 3-135 (445)
375 PRK06500 short chain dehydroge 93.8 0.064 1.4E-06 49.3 3.8 36 230-265 4-39 (249)
376 PRK07814 short chain dehydroge 93.8 0.062 1.4E-06 50.5 3.8 38 229-266 7-44 (263)
377 PRK12481 2-deoxy-D-gluconate 3 93.8 0.085 1.8E-06 49.4 4.7 37 229-265 5-41 (251)
378 PRK05786 fabG 3-ketoacyl-(acyl 93.8 0.079 1.7E-06 48.5 4.4 38 229-266 2-39 (238)
379 TIGR01214 rmlD dTDP-4-dehydror 93.8 0.095 2.1E-06 49.5 5.0 52 234-285 1-60 (287)
380 PRK05653 fabG 3-ketoacyl-(acyl 93.8 0.099 2.1E-06 47.5 4.9 38 229-266 2-39 (246)
381 PLN02896 cinnamyl-alcohol dehy 93.7 0.11 2.5E-06 51.1 5.6 59 227-285 5-89 (353)
382 cd08230 glucose_DH Glucose deh 93.7 0.13 2.9E-06 50.6 6.0 77 230-307 171-272 (355)
383 PLN00198 anthocyanidin reducta 93.6 0.18 4E-06 49.1 6.9 36 229-264 6-41 (338)
384 KOG0725 Reductases with broad 93.6 0.086 1.9E-06 51.1 4.5 40 228-267 4-43 (270)
385 PRK11863 N-acetyl-gamma-glutam 93.6 0.088 1.9E-06 52.5 4.6 76 233-308 3-85 (313)
386 PRK07666 fabG 3-ketoacyl-(acyl 93.6 0.089 1.9E-06 48.3 4.4 38 229-266 4-41 (239)
387 PRK05565 fabG 3-ketoacyl-(acyl 93.6 0.091 2E-06 48.0 4.5 38 229-266 2-40 (247)
388 PRK06077 fabG 3-ketoacyl-(acyl 93.6 0.17 3.7E-06 46.5 6.3 36 229-264 3-38 (252)
389 PLN02695 GDP-D-mannose-3',5'-e 93.6 0.12 2.6E-06 51.8 5.6 54 231-284 20-94 (370)
390 TIGR03376 glycerol3P_DH glycer 93.6 0.13 2.8E-06 51.7 5.8 70 234-304 1-116 (342)
391 PRK07634 pyrroline-5-carboxyla 93.6 0.16 3.4E-06 47.6 6.0 54 231-285 3-76 (245)
392 PRK06139 short chain dehydroge 93.6 0.061 1.3E-06 53.3 3.4 38 229-266 4-41 (330)
393 PRK05808 3-hydroxybutyryl-CoA 93.5 0.087 1.9E-06 50.8 4.3 31 233-264 4-34 (282)
394 PLN02657 3,8-divinyl protochlo 93.5 0.13 2.9E-06 52.1 5.9 39 227-265 55-93 (390)
395 PRK06079 enoyl-(acyl carrier p 93.5 0.097 2.1E-06 49.1 4.5 36 230-265 5-42 (252)
396 cd00704 MDH Malate dehydrogena 93.5 0.17 3.7E-06 50.4 6.5 54 234-287 2-88 (323)
397 PRK08644 thiamine biosynthesis 93.5 0.12 2.7E-06 48.3 5.1 36 229-265 25-61 (212)
398 PRK08762 molybdopterin biosynt 93.5 0.1 2.2E-06 52.9 4.8 36 229-265 132-168 (376)
399 PRK12742 oxidoreductase; Provi 93.5 0.11 2.5E-06 47.4 4.8 36 229-264 3-38 (237)
400 PRK07326 short chain dehydroge 93.4 0.08 1.7E-06 48.4 3.7 37 230-266 4-40 (237)
401 cd08253 zeta_crystallin Zeta-c 93.4 0.37 8.1E-06 45.2 8.4 94 213-306 126-245 (325)
402 PRK08217 fabG 3-ketoacyl-(acyl 93.4 0.08 1.7E-06 48.6 3.7 36 230-265 3-38 (253)
403 PRK06114 short chain dehydroge 93.3 0.13 2.8E-06 48.0 5.0 38 229-266 5-42 (254)
404 cd08239 THR_DH_like L-threonin 93.3 0.17 3.7E-06 49.2 6.0 93 212-306 145-264 (339)
405 PRK06928 pyrroline-5-carboxyla 93.3 0.18 3.9E-06 48.8 6.1 52 233-285 2-74 (277)
406 TIGR03026 NDP-sugDHase nucleot 93.3 0.28 6.1E-06 50.0 7.8 76 228-303 309-409 (411)
407 PRK05557 fabG 3-ketoacyl-(acyl 93.3 0.14 3E-06 46.6 5.1 37 229-265 2-38 (248)
408 PRK05875 short chain dehydroge 93.3 0.084 1.8E-06 49.7 3.7 37 229-265 4-40 (276)
409 COG0604 Qor NADPH:quinone redu 93.3 0.18 4E-06 50.1 6.2 93 213-306 124-243 (326)
410 PRK08643 acetoin reductase; Va 93.2 0.097 2.1E-06 48.6 4.0 34 232-265 2-35 (256)
411 cd05293 LDH_1 A subgroup of L- 93.2 0.24 5.1E-06 49.2 6.9 53 233-287 4-83 (312)
412 PLN02214 cinnamoyl-CoA reducta 93.2 0.21 4.6E-06 49.3 6.6 35 230-264 8-42 (342)
413 PRK12823 benD 1,6-dihydroxycyc 93.2 0.14 2.9E-06 47.7 5.0 37 229-265 5-41 (260)
414 PRK06505 enoyl-(acyl carrier p 93.2 0.12 2.7E-06 49.2 4.7 36 230-265 5-42 (271)
415 PRK07533 enoyl-(acyl carrier p 93.2 0.14 3.1E-06 48.1 5.1 37 228-265 6-45 (258)
416 cd05282 ETR_like 2-enoyl thioe 93.1 0.32 6.8E-06 46.3 7.4 94 213-306 120-239 (323)
417 PRK05597 molybdopterin biosynt 93.1 0.15 3.2E-06 51.5 5.3 35 229-264 25-60 (355)
418 TIGR03206 benzo_BadH 2-hydroxy 93.1 0.14 3E-06 47.1 4.8 36 230-265 1-36 (250)
419 PRK05600 thiamine biosynthesis 93.0 0.14 3.1E-06 52.0 5.2 36 228-264 37-73 (370)
420 PF03435 Saccharop_dh: Sacchar 93.0 0.12 2.5E-06 52.0 4.5 70 235-305 1-99 (386)
421 PRK06198 short chain dehydroge 93.0 0.11 2.4E-06 48.2 4.1 38 229-266 3-41 (260)
422 PLN02778 3,5-epimerase/4-reduc 93.0 0.26 5.6E-06 48.0 6.7 55 231-285 8-67 (298)
423 PRK06181 short chain dehydroge 93.0 0.16 3.5E-06 47.3 5.2 34 232-265 1-34 (263)
424 PRK11303 DNA-binding transcrip 93.0 2.4 5.3E-05 40.6 13.4 93 75-170 19-125 (328)
425 PRK12827 short chain dehydroge 93.0 0.16 3.4E-06 46.5 4.9 36 229-264 3-38 (249)
426 PRK06197 short chain dehydroge 93.0 0.087 1.9E-06 50.8 3.4 37 229-265 13-49 (306)
427 COG0039 Mdh Malate/lactate deh 92.9 0.25 5.4E-06 49.3 6.6 53 233-287 1-81 (313)
428 PRK12937 short chain dehydroge 92.9 0.16 3.5E-06 46.5 5.0 37 229-265 2-38 (245)
429 PRK08226 short chain dehydroge 92.9 0.15 3.3E-06 47.5 4.8 36 230-265 4-39 (263)
430 TIGR03466 HpnA hopanoid-associ 92.9 0.19 4.2E-06 48.0 5.6 52 233-284 1-73 (328)
431 KOG1201 Hydroxysteroid 17-beta 92.9 0.22 4.7E-06 49.3 6.0 59 227-285 33-124 (300)
432 PLN00141 Tic62-NAD(P)-related 92.8 0.15 3.2E-06 47.8 4.7 37 229-265 14-50 (251)
433 PRK08263 short chain dehydroge 92.8 0.2 4.3E-06 47.4 5.5 35 231-265 2-36 (275)
434 COG2072 TrkA Predicted flavopr 92.8 0.14 3E-06 53.0 4.8 37 228-265 171-207 (443)
435 PRK11749 dihydropyrimidine deh 92.8 0.17 3.7E-06 52.1 5.4 115 139-265 52-172 (457)
436 PF00070 Pyr_redox: Pyridine n 92.8 0.21 4.5E-06 38.9 4.7 32 234-266 1-32 (80)
437 PRK06914 short chain dehydroge 92.8 0.16 3.4E-06 48.0 4.7 36 231-266 2-37 (280)
438 PRK09620 hypothetical protein; 92.7 0.26 5.7E-06 46.8 6.2 59 230-288 1-100 (229)
439 TIGR02279 PaaC-3OHAcCoADH 3-hy 92.7 0.15 3.2E-06 53.9 5.0 32 233-265 6-37 (503)
440 PRK07792 fabG 3-ketoacyl-(acyl 92.7 0.17 3.6E-06 49.2 5.0 39 227-265 7-45 (306)
441 PRK06113 7-alpha-hydroxysteroi 92.7 0.15 3.3E-06 47.4 4.5 37 229-265 8-44 (255)
442 PRK08278 short chain dehydroge 92.7 0.17 3.7E-06 48.0 4.9 37 229-265 3-39 (273)
443 PRK14573 bifunctional D-alanyl 92.7 0.18 3.9E-06 56.0 5.8 122 233-361 5-129 (809)
444 PRK09135 pteridine reductase; 92.7 0.16 3.5E-06 46.4 4.7 36 230-265 4-39 (249)
445 PRK02705 murD UDP-N-acetylmura 92.7 0.18 3.9E-06 51.7 5.4 125 234-361 2-134 (459)
446 PLN02730 enoyl-[acyl-carrier-p 92.7 0.19 4.1E-06 49.6 5.3 35 227-262 4-41 (303)
447 PRK10727 DNA-binding transcrip 92.7 4.2 9.2E-05 39.4 14.8 88 75-169 20-122 (343)
448 cd08281 liver_ADH_like1 Zinc-d 92.7 0.31 6.7E-06 48.4 6.9 76 230-306 190-292 (371)
449 PRK08642 fabG 3-ketoacyl-(acyl 92.6 0.18 3.9E-06 46.4 4.9 35 230-264 3-37 (253)
450 PRK07677 short chain dehydroge 92.6 0.16 3.4E-06 47.2 4.5 35 232-266 1-35 (252)
451 PRK06701 short chain dehydroge 92.6 0.16 3.5E-06 48.9 4.7 38 228-265 42-79 (290)
452 PRK05993 short chain dehydroge 92.6 0.15 3.2E-06 48.5 4.4 36 231-266 3-38 (277)
453 PRK07577 short chain dehydroge 92.6 0.21 4.5E-06 45.5 5.2 36 231-266 2-37 (234)
454 PRK07806 short chain dehydroge 92.6 0.2 4.3E-06 46.2 5.1 36 230-265 4-39 (248)
455 PRK10423 transcriptional repre 92.6 3.1 6.8E-05 39.8 13.6 88 75-169 17-119 (327)
456 PRK08594 enoyl-(acyl carrier p 92.6 0.22 4.7E-06 47.0 5.4 36 229-264 4-41 (257)
457 PRK08945 putative oxoacyl-(acy 92.6 0.11 2.5E-06 48.0 3.4 37 229-265 9-45 (247)
458 PRK07201 short chain dehydroge 92.5 0.18 3.9E-06 53.8 5.3 38 229-266 368-405 (657)
459 PLN00106 malate dehydrogenase 92.5 0.39 8.5E-06 48.0 7.4 57 231-287 17-98 (323)
460 PRK08268 3-hydroxy-acyl-CoA de 92.5 0.17 3.7E-06 53.4 5.1 72 233-306 8-125 (507)
461 PRK07109 short chain dehydroge 92.5 0.12 2.5E-06 51.2 3.6 37 229-265 5-41 (334)
462 TIGR03451 mycoS_dep_FDH mycoth 92.5 0.3 6.4E-06 48.3 6.5 94 212-306 157-278 (358)
463 PLN02602 lactate dehydrogenase 92.4 0.32 6.9E-06 49.1 6.7 52 233-286 38-116 (350)
464 cd00300 LDH_like L-lactate deh 92.4 0.27 5.8E-06 48.3 6.0 51 235-287 1-78 (300)
465 cd08289 MDR_yhfp_like Yhfp put 92.4 0.28 6E-06 47.0 5.9 88 219-306 134-245 (326)
466 PRK00683 murD UDP-N-acetylmura 92.4 0.32 6.8E-06 49.7 6.7 103 231-361 2-127 (418)
467 PRK07984 enoyl-(acyl carrier p 92.4 0.17 3.8E-06 48.1 4.5 36 230-265 4-41 (262)
468 cd05290 LDH_3 A subgroup of L- 92.3 0.29 6.3E-06 48.4 6.2 53 234-287 1-80 (307)
469 PRK08267 short chain dehydroge 92.3 0.16 3.5E-06 47.3 4.1 34 233-266 2-35 (260)
470 TIGR01082 murC UDP-N-acetylmur 92.3 0.22 4.7E-06 51.3 5.4 121 234-361 1-124 (448)
471 TIGR01087 murD UDP-N-acetylmur 92.3 0.34 7.4E-06 49.4 6.8 121 234-361 1-127 (433)
472 COG0059 IlvC Ketol-acid reduct 92.2 0.27 5.9E-06 48.9 5.7 78 230-308 16-114 (338)
473 PRK07985 oxidoreductase; Provi 92.2 0.21 4.5E-06 48.3 4.9 36 229-264 46-81 (294)
474 TIGR01777 yfcH conserved hypot 92.2 0.28 6.1E-06 46.0 5.7 52 235-286 1-68 (292)
475 cd01487 E1_ThiF_like E1_ThiF_l 92.2 0.3 6.6E-06 44.2 5.7 31 234-265 1-32 (174)
476 PRK12744 short chain dehydroge 92.2 0.19 4.1E-06 46.8 4.5 35 229-263 5-39 (257)
477 KOG0409 Predicted dehydrogenas 92.2 0.36 7.9E-06 48.0 6.5 77 229-306 32-132 (327)
478 PRK11064 wecC UDP-N-acetyl-D-m 92.2 0.71 1.5E-05 47.5 9.0 75 227-302 315-414 (415)
479 cd05294 LDH-like_MDH_nadp A la 92.2 0.37 8.1E-06 47.6 6.7 54 233-287 1-84 (309)
480 PLN02819 lysine-ketoglutarate 92.2 0.22 4.8E-06 56.9 5.6 88 269-360 291-403 (1042)
481 PRK05086 malate dehydrogenase; 92.1 0.39 8.4E-06 47.6 6.8 55 233-287 1-81 (312)
482 PLN02206 UDP-glucuronate decar 92.1 0.34 7.3E-06 50.2 6.6 37 228-264 115-151 (442)
483 PRK08303 short chain dehydroge 92.1 0.23 5E-06 48.5 5.1 38 228-265 4-41 (305)
484 PTZ00345 glycerol-3-phosphate 92.1 0.32 6.9E-06 49.5 6.2 71 233-304 12-129 (365)
485 PRK12779 putative bifunctional 92.1 0.24 5.2E-06 56.2 5.8 35 230-265 304-338 (944)
486 PRK06180 short chain dehydroge 92.0 0.18 3.9E-06 47.8 4.2 35 231-265 3-37 (277)
487 PRK11880 pyrroline-5-carboxyla 92.0 0.32 7E-06 46.2 5.9 52 233-285 3-72 (267)
488 PLN02653 GDP-mannose 4,6-dehyd 92.0 0.25 5.4E-06 48.2 5.3 36 229-264 3-38 (340)
489 cd08290 ETR 2-enoyl thioester 92.0 0.51 1.1E-05 45.6 7.4 94 213-306 128-253 (341)
490 PRK06128 oxidoreductase; Provi 92.0 0.24 5.1E-06 47.8 5.0 36 229-264 52-87 (300)
491 PRK00436 argC N-acetyl-gamma-g 92.0 0.22 4.9E-06 49.8 5.0 75 233-307 3-102 (343)
492 TIGR01745 asd_gamma aspartate- 92.0 0.34 7.4E-06 49.3 6.3 76 233-308 1-101 (366)
493 TIGR02622 CDP_4_6_dhtase CDP-g 92.0 0.26 5.7E-06 48.4 5.4 36 230-265 2-37 (349)
494 PRK07831 short chain dehydroge 92.0 0.23 5.1E-06 46.4 4.8 38 229-266 14-52 (262)
495 PLN02819 lysine-ketoglutarate 91.9 0.12 2.6E-06 58.9 3.3 115 230-361 567-721 (1042)
496 PRK15182 Vi polysaccharide bio 91.9 0.93 2E-05 46.9 9.5 78 226-303 308-412 (425)
497 cd05288 PGDH Prostaglandin deh 91.9 0.36 7.8E-06 46.3 6.1 94 213-306 127-246 (329)
498 PRK06483 dihydromonapterin red 91.9 0.23 4.9E-06 45.6 4.5 35 232-266 2-36 (236)
499 cd01339 LDH-like_MDH L-lactate 91.8 0.36 7.8E-06 47.2 6.1 51 235-287 1-78 (300)
500 PRK04663 murD UDP-N-acetylmura 91.8 0.49 1.1E-05 48.6 7.4 123 230-361 4-133 (438)
No 1
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=2e-101 Score=757.11 Aligned_cols=342 Identities=70% Similarity=1.135 Sum_probs=322.4
Q ss_pred cccccchhhhhcccccccccccccccCCCccCCCCCCcccCCCCCCCCCCCCCCcccccceeeeecHHHHHHHHHHHHHH
Q 017679 14 GATAWPWAWATRSLNLSAINDNRIIMSPPLITLDLPEIWTPPNSRDCNPLPQRNCSNLQTATVIDGKSIAEEIRSGIDKE 93 (368)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~a~ildGk~ia~~i~~~i~~~ 93 (368)
+.+++.+..+|+.+++ +++++.+|||++|++|+.|.|++.+ +++.+.....++.+||||++|++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ildGk~vA~~i~~~lk~~ 75 (345)
T PLN02897 4 SAHTKAFRLATRDVHC----FSSILVSPPLVSLDLPENWIPYSDP----PPPVSFETEQKTVVIDGNVIAEEIRTKIASE 75 (345)
T ss_pred hhhhhccccchhhhhh----hhhhhcCCcccccccccCCCccccc----cccccccccccceEeehHHHHHHHHHHHHHH
Confidence 4578889999999999 8999999999999999999999955 4444566667889999999999999999999
Q ss_pred HHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCC
Q 017679 94 VRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLP 173 (368)
Q Consensus 94 v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp 173 (368)
+++++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||+|++|||||||+|||
T Consensus 76 v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D~~V~GIlVQlPLP 155 (345)
T PLN02897 76 VRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNEDTSIHGILVQLPLP 155 (345)
T ss_pred HHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCC
Confidence 99999887899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHh
Q 017679 174 QHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQ 253 (368)
Q Consensus 174 ~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~ 253 (368)
+|+|+++++++|+|+|||||||+.|+|+|+.|++.++|+||||.||+++|++|+++++||+|+|||||++||+|++++|+
T Consensus 156 ~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~ 235 (345)
T PLN02897 156 QHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQ 235 (345)
T ss_pred CCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHH
Confidence 99999999999999999999999999999986545789999999999999999999999999999999999999999999
Q ss_pred hCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc
Q 017679 254 RHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR 333 (368)
Q Consensus 254 ~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~ 333 (368)
++|||||+||++|+++.+++++|||||+|+|+|++|+++|||+|++|||+|+|+.+ +++++.|.+++|||||+++.+
T Consensus 236 ~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVIDVGin~~~---~~~~~~g~klvGDVdfe~v~~ 312 (345)
T PLN02897 236 RHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVIDVGTTPVE---DSSCEFGYRLVGDVCYEEALG 312 (345)
T ss_pred HCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEccccccc---cccccCCCeeEecccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999975 333333349999999999999
Q ss_pred cceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 334 LASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 334 ~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+|++||||||||||||++|||+|+++++++|+.
T Consensus 313 ~as~iTPVPGGVGpmTvamLm~N~~~a~~~~~~ 345 (345)
T PLN02897 313 VASAITPVPGGVGPMTITMLLCNTLDAAKRIFL 345 (345)
T ss_pred hccccCCCCCchhHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999863
No 2
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=100.00 E-value=1.3e-94 Score=711.75 Aligned_cols=327 Identities=64% Similarity=1.006 Sum_probs=296.1
Q ss_pred ccccCCCccCCCCCCcccCCCCCCCC-CCCC--CCcccccceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEe
Q 017679 36 RIIMSPPLITLDLPEIWTPPNSRDCN-PLPQ--RNCSNLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILV 112 (368)
Q Consensus 36 ~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~--~~~~~~~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~v 112 (368)
++..+| +++++|+.|.-....+.+ ..++ ......+++.+||||++|++|++++++++++|+++.|++|+||+|+|
T Consensus 34 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ildGk~iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlv 111 (364)
T PLN02616 34 RRCVGP--LRVRTTASGRGCCINSSSSPSPVINADTGSEGGAKVIDGKAVAKKIRDEITIEVSRMKESIGVVPGLAVILV 111 (364)
T ss_pred ceeccc--cccCccccccccccCCCCCcchhhhhhcCccccCeEeEhHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEe
Confidence 344444 789999999322222111 0111 23444556789999999999999999999999988789999999999
Q ss_pred CCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679 113 GERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192 (368)
Q Consensus 113 G~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD 192 (368)
|+||+|..|+++|.|+|+++||+++.++||++++|+||++.|++||+|++|||||||+|||+|+|+++++++|+|+||||
T Consensus 112 G~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D~~V~GIlVQlPLP~~id~~~i~~aI~P~KDVD 191 (364)
T PLN02616 112 GDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNNDPSVHGILVQLPLPSHMDEQNILNAVSIEKDVD 191 (364)
T ss_pred CCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhh
Q 017679 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQI 272 (368)
Q Consensus 193 gl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~ 272 (368)
|||+.|+|+|+.|++.++|+||||+||+++|++|+++++||+|+|||||++||+|+++||+++|||||+||++|+++.++
T Consensus 192 Gl~p~N~G~L~~g~~~~~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~ 271 (364)
T PLN02616 192 GFHPLNIGRLAMRGREPLFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEI 271 (364)
T ss_pred cCChhhhHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHH
Confidence 99999999999875568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHH
Q 017679 273 TSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAM 352 (368)
Q Consensus 273 ~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~am 352 (368)
+++|||||+|+|+|++|+++|||||++|||+|+|+++ +++++.+.|++|||||+++.++|++||||||||||||++|
T Consensus 272 ~r~ADIVIsAvGkp~~i~~d~vK~GAvVIDVGIn~~~---~~~~~~g~klvGDVdfe~v~~~as~ITPVPGGVGpmTva~ 348 (364)
T PLN02616 272 TREADIIISAVGQPNMVRGSWIKPGAVVIDVGINPVE---DASSPRGYRLVGDVCYEEACKVASAVTPVPGGVGPMTIAM 348 (364)
T ss_pred HhhCCEEEEcCCCcCcCCHHHcCCCCEEEeccccccc---cccccCCCeEEecCcHHHHHhhccccCCCCCchHHHHHHH
Confidence 9999999999999999999999999999999999975 3222223399999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCC
Q 017679 353 LLSNTLDSAKRAYGF 367 (368)
Q Consensus 353 Ll~N~v~a~~~~~~~ 367 (368)
||+|++++++++.++
T Consensus 349 Ll~N~~~aa~~~~~~ 363 (364)
T PLN02616 349 LLSNTLTSAKRIHNF 363 (364)
T ss_pred HHHHHHHHHHHhhcC
Confidence 999999999988765
No 3
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=100.00 E-value=4.3e-93 Score=680.33 Aligned_cols=282 Identities=52% Similarity=0.840 Sum_probs=274.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||.+|+++++++++++++++++.++.|+|++|+|||||+|+.|+++|.|+|+++|+.++.++||++++|+||++.|
T Consensus 1 ~~idGk~lA~~i~~~lk~~v~~~~~~~~~~P~LavilvgddpaS~~YV~~K~k~~~~iGi~~~~~~l~~~~t~~eLl~~I 80 (283)
T COG0190 1 MIIDGKALAEKIREELKEKVEALKAKGGFKPGLAVILVGDDPASQVYVRSKKKAAEEIGIASELYDLPEDITEEELLALI 80 (283)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCeeEEEeCCCcCCHHHHHHHH
Confidence 37999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++|||||||+|||+|+|+++++++|+|+||||||||+|+|+|..+ ++.|+||||.|++++|++|++++.||+
T Consensus 81 ~~lN~D~~v~GIlVQlPLp~hld~~~il~~I~p~KDVDG~hp~N~g~L~~~--~~~~~PCTp~gi~~ll~~~~i~l~Gk~ 158 (283)
T COG0190 81 DELNADPEVDGILVQLPLPKHLDEQKLLQAIDPEKDVDGFHPYNLGKLAQG--EPGFLPCTPAGIMTLLEEYGIDLRGKN 158 (283)
T ss_pred HHhcCCCCCcEEEEeCCCCCCCCHHHHHhhcCcCCCccccChhHhcchhcC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 788999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||++||||++.+|++.|||||+||++|+++.+++++|||||+|+|+|+|++.+|+|||++|||+|+|+++
T Consensus 159 ~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~AvG~p~~i~~d~vk~gavVIDVGinrv~----- 233 (283)
T COG0190 159 VVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVAVGKPHFIKADMVKPGAVVIDVGINRVN----- 233 (283)
T ss_pred EEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEecCCccccccccccCCCEEEecCCcccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
.+|++|||||++++++|++||||||||||||++|||+|++++++++.+.
T Consensus 234 ----~~kl~GDVdf~~v~~~a~~iTPVPGGVGPmTvamLl~Nt~~a~~~~~~~ 282 (283)
T COG0190 234 ----DGKLVGDVDFDSVKEKASAITPVPGGVGPMTVAMLLENTLKAAERQRGE 282 (283)
T ss_pred ----CCceEeeccHHHHHHhhcccCCCCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 3699999999999999999999999999999999999999999987653
No 4
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3e-92 Score=680.61 Aligned_cols=283 Identities=42% Similarity=0.735 Sum_probs=274.0
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|.|+++||+++.++||++++|+||++
T Consensus 1 ~~~il~Gk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~ 80 (288)
T PRK14171 1 MNNIIDGKALANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLIS 80 (288)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++|
T Consensus 81 ~I~~LN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~av~~lL~~y~i~l~G 159 (288)
T PRK14171 81 KINELNLDNEISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGI-SQGFIPCTALGCLAVIKKYEPNLTG 159 (288)
T ss_pred HHHHHcCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCC-CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999999999999999999999999773 3789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|+++||+++|||||+||++|++|++++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+
T Consensus 160 K~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~AvGkp~~i~~~~vk~GavVIDvGin~~~--- 236 (288)
T PRK14171 160 KNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAAIGSPLKLTAEYFNPESIVIDVGINRIS--- 236 (288)
T ss_pred CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCCCccCHHHcCCCCEEEEeeccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
++|++|||||+++.++|++||||||||||||++|||+|+++++++.+
T Consensus 237 ------~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 283 (288)
T PRK14171 237 ------GNKIIGDVDFENVKSKVKYITPVPGGIGPMTIAFLLKNTVKAFKDSL 283 (288)
T ss_pred ------CCCeECCccHHHHHhhceEeCCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999999999999998654
No 5
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.1e-92 Score=678.47 Aligned_cols=283 Identities=51% Similarity=0.872 Sum_probs=275.2
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~il~Gk~iA~~i~~~ik~~i~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 79 (284)
T PRK14170 1 MGEIIDGKKLAKEIQEKVTREVAELVKE-GKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLS 79 (284)
T ss_pred CCeEEEhHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 6789999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+||.|+|+|+.| .++|+||||.||+++|++|+++++|
T Consensus 80 ~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G 157 (284)
T PRK14170 80 VVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIG--KDSFVPCTPAGIIELIKSTGTQIEG 157 (284)
T ss_pred HHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus 158 k~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVIDvGin~~~--- 234 (284)
T PRK14170 158 KRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDE--- 234 (284)
T ss_pred CEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+|+++|||||+++.++|++||||||||||||++|||+|+++++++++.+
T Consensus 235 ------~gkl~GDvdfe~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 283 (284)
T PRK14170 235 ------NNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKM 283 (284)
T ss_pred ------CCCeecccchHHHHhhccEecCCCCChHHHHHHHHHHHHHHHHHHHhhc
Confidence 3689999999999999999999999999999999999999999998764
No 6
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=100.00 E-value=2.4e-91 Score=677.36 Aligned_cols=294 Identities=61% Similarity=1.012 Sum_probs=279.3
Q ss_pred cccceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHH
Q 017679 70 NLQTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDE 149 (368)
Q Consensus 70 ~~~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~e 149 (368)
..+|+.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|
T Consensus 5 ~~~~~~ildGk~vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~e 84 (299)
T PLN02516 5 SDHVAQIIDGKAIAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAE 84 (299)
T ss_pred ccccCeEeehHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHH
Confidence 34578899999999999999999999998887899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCC
Q 017679 150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVE 229 (368)
Q Consensus 150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~ 229 (368)
|++.|++||+|++|||||||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++
T Consensus 85 l~~~I~~lN~D~~V~GIlvq~PlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~ 164 (299)
T PLN02516 85 LISKVHELNANPDVHGILVQLPLPKHINEEKILNEISLEKDVDGFHPLNIGKLAMKGREPLFLPCTPKGCLELLSRSGIP 164 (299)
T ss_pred HHHHHHHHhCCCCCCeEEEecCCCCCcCHHHHHhccCcccccCccCHhhHhhHhcCCCCCCCCCCCHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999976546789999999999999999999
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~ 309 (368)
++||+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+.+
T Consensus 165 l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~~~~~ADIvv~AvGk~~~i~~~~vk~gavVIDvGin~~~ 244 (299)
T PLN02516 165 IKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPESIVREADIVIAAAGQAMMIKGDWIKPGAAVIDVGTNAVS 244 (299)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEeeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+++...+.+++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus 245 ---~~~~~~g~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~~ 298 (299)
T PLN02516 245 ---DPSKKSGYRLVGDVDFAEVSKVAGWITPVPGGVGPMTVAMLLKNTVDGAKRVFA 298 (299)
T ss_pred ---cccccCCCceEcCcChHHhhhhceEecCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence 322222338999999999999999999999999999999999999999999874
No 7
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.8e-91 Score=675.54 Aligned_cols=288 Identities=42% Similarity=0.713 Sum_probs=274.9
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++|+++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus 1 ~~~ildGk~va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~ 80 (294)
T PRK14187 1 ETNIIDGKKIANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIE 80 (294)
T ss_pred CcEEeehHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~~PcTp~avi~lL~~~~i~l~G 160 (294)
T PRK14187 81 KINELNNDDSVHGILVQLPVPNHIDKNLIINTIDPEKDVDGFHNENVGRLFTGQKKNCLIPCTPKGCLYLIKTITRNLSG 160 (294)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCCCCCCCccCcCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987544689999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|+++||+++|||||+||++|+++.+++++|||||+|+|+|++|+++|||+|++|||+|+|+++
T Consensus 161 k~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gaiVIDVGin~~~--- 237 (294)
T PRK14187 161 SDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAAVGIPNFVKYSWIKKGAIVIDVGINSIE--- 237 (294)
T ss_pred CEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+.. ..+++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus 238 ~~~---~~kl~GDvd~e~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 288 (294)
T PRK14187 238 EGG---VKKFVGDVDFAEVKKKASAITPVPGGVGPMTIAFLMVNTVIAACNQKG 288 (294)
T ss_pred CCC---ccceeCCccHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 100 118999999999999999999999999999999999999999987643
No 8
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.5e-91 Score=674.74 Aligned_cols=291 Identities=50% Similarity=0.797 Sum_probs=276.5
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
+.+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 3 ~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~ 82 (297)
T PRK14168 3 AKIIKGTEIREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLAL 82 (297)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 67999999999999999999999998878999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|+..++|+||||.||+++|++|+++++||
T Consensus 83 I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~avi~lL~~~~i~l~Gk 162 (297)
T PRK14168 83 IDKYNNDDSIHGILVQLPLPKHINEKKVLNAIDPDKDVDGFHPVNVGRLMIGGDEVKFLPCTPAGIQEMLVRSGVETSGA 162 (297)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999885447899999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~ 309 (368)
+|+|||||++||+|+++||+++ |||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|++.
T Consensus 163 ~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVsAvGkp~~i~~~~ik~gavVIDvGin~~~ 242 (297)
T PRK14168 163 EVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIVAAGVPNLVKPEWIKPGATVIDVGVNRVG 242 (297)
T ss_pred EEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEecCCCccC
Confidence 9999999999999999999998 899999999999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+.++.++++++|||||+++.++|++||||||||||||++|||+|+++++++|+++
T Consensus 243 ---~~~~~g~~~~~GDVdfe~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~~ 297 (297)
T PRK14168 243 ---TNESTGKAILSGDVDFDAVKEIAGKITPVPGGVGPMTIAMLMRNTLKSAKFHLSL 297 (297)
T ss_pred ---ccccCCCcceeccccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 1111112249999999999999999999999999999999999999999999985
No 9
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5e-91 Score=670.79 Aligned_cols=280 Identities=42% Similarity=0.714 Sum_probs=272.1
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
|.+||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 1 ~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~ 79 (282)
T PRK14169 1 ATRLDGRAVSKKILADLKQTVAKLAQQ-DVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAK 79 (282)
T ss_pred CeeeehHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 468999999999999999999999877 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.+ .++|+||||+||+++|++|+++++||
T Consensus 80 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 157 (282)
T PRK14169 80 VAELNHDPDVDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWAN--EPTVVASTPYGIMALLDAYDIDVAGK 157 (282)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 67899999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|+++||+++|||||+||++|++|++++++|||||+|+|+|+||+++|+|+|++|||+|+|++.
T Consensus 158 ~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVIDvGin~~~---- 233 (282)
T PRK14169 158 RVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVIDVGISRGA---- 233 (282)
T ss_pred EEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEEEeeccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+|+++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 234 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 280 (282)
T PRK14169 234 -----DGKLLGDVDEAAVAPIASAITPVPGGVGPMTIASLMAQTVTLAKRRA 280 (282)
T ss_pred -----CCCeeecCcHHHHHhhccEecCCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999999999999998754
No 10
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=6.9e-91 Score=672.53 Aligned_cols=285 Identities=47% Similarity=0.780 Sum_probs=272.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (293)
T PRK14185 2 QLIDGKAISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKV 81 (293)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~GK~ 159 (293)
T PRK14185 82 RELNQDDDVDGFIVQLPLPKHISEQKVIEAIDYRKDVDGFHPINVGRMSIG--LPCFVSATPNGILELLKRYHIETSGKK 159 (293)
T ss_pred HHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcCCCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999977 578999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~ 310 (368)
|+|||||++||+|+++||+++ |||||+||++|++|.+++++|||||+|+|+|++|+++|||+|++|||+|+|+++
T Consensus 160 vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~- 238 (293)
T PRK14185 160 CVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAALGQPEFVKADMVKEGAVVIDVGTTRVP- 238 (293)
T ss_pred EEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecCcccc-
Confidence 999999999999999999998 799999999999999999999999999999999999999999999999999965
Q ss_pred CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364 (368)
Q Consensus 311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 364 (368)
+++++.+.+++|||||+++.++|++||||||||||||++|||+|+++++++.
T Consensus 239 --~~~~~~g~klvGDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 290 (293)
T PRK14185 239 --DATRKSGFKLTGDVKFDEVAPKCSYITPVPGGVGPMTIVSLMKNTLLAGKKA 290 (293)
T ss_pred --cccccCCCeeEcCCCHHHHHhhccEeCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 3332223389999999999999999999999999999999999999999754
No 11
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.9e-91 Score=669.10 Aligned_cols=278 Identities=38% Similarity=0.662 Sum_probs=269.0
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|+++++++++++++++..+|+|++|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~ildGk~iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (278)
T PRK14172 1 MGQIINGKEVALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLIN 80 (278)
T ss_pred CCeEEeHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998773356999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~av~~lL~~~~i~l~G 158 (278)
T PRK14172 81 EIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKG--EKCFLPCTPNSVITLIKSLNIDIEG 158 (278)
T ss_pred HHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|+++||+++|||||+||++|++|.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+.+
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~--- 235 (278)
T PRK14172 159 KEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIGRPKFIDEEYVKEGAIVIDVGTSSVN--- 235 (278)
T ss_pred CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCcEEEEeeccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 362 (368)
|+++|||||+++.+++++||||||||||||++|||+|++++++
T Consensus 236 -------gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~ 278 (278)
T PRK14172 236 -------GKITGDVNFDKVIDKASYITPVPGGVGSLTTTLLIKNVCEALK 278 (278)
T ss_pred -------CceeeeccHHHHHhhccEecCCCCCccHHHHHHHHHHHHHhcC
Confidence 5899999999999999999999999999999999999999864
No 12
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-90 Score=668.35 Aligned_cols=280 Identities=47% Similarity=0.767 Sum_probs=271.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|.|+++||+++.++||++++|+||++.|
T Consensus 2 ~il~Gk~~a~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14166 2 TLLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALI 80 (282)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.|. .++|+||||+||+++|++|+++++||+
T Consensus 81 ~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~-~~~~~PcTp~avi~lL~~y~i~l~Gk~ 159 (282)
T PRK14166 81 NTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGL-ESGFLPCTPLGVMKLLKAYEIDLEGKD 159 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCC-CCCCcCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999773 468999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||.+||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+..
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDvGin~~~----- 234 (282)
T PRK14166 160 AVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE----- 234 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCCCcCccCHHHcCCCCEEEEecccccC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+++++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 235 ----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~v~a~~~~~ 281 (282)
T PRK14166 235 ----SGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL 281 (282)
T ss_pred ----CCCeeCCCCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 25899999999999999999999999999999999999999998754
No 13
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.3e-90 Score=668.89 Aligned_cols=282 Identities=50% Similarity=0.818 Sum_probs=274.1
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+.+||||++|++|++++++++++|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (284)
T PRK14190 2 MAVIIDGKEVAKEKREQLKEEVVKLKEQ-GIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLA 80 (284)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 5679999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~G 158 (284)
T PRK14190 81 LIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLG--QDTFLPCTPHGILELLKEYNIDISG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|++++|+++|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+++
T Consensus 159 k~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~AvG~p~~i~~~~ik~gavVIDvGi~~~~--- 235 (284)
T PRK14190 159 KHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVAVGKPKLITADMVKEGAVVIDVGVNRLE--- 235 (284)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+||++|||||+++.++|++||||||||||||++|||+|++++++++.+
T Consensus 236 ------~gkl~GDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~ 283 (284)
T PRK14190 236 ------NGKLCGDVDFDNVKEKASYITPVPGGVGPMTITMLMHNTVELAKRAGG 283 (284)
T ss_pred ------CCCeeccCcHHHHhhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999999999999999999999998764
No 14
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-90 Score=672.02 Aligned_cols=288 Identities=45% Similarity=0.759 Sum_probs=275.1
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~il~Gk~vA~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~ 79 (297)
T PRK14167 1 MTEIIDGNAVAAQIRDDLTDAIETLEDA-GVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYD 79 (297)
T ss_pred CCeEEeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 5789999999999999999999999876 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++|||||||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .+.|+||||+||+++|++|+++++|
T Consensus 80 ~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~G 157 (297)
T PRK14167 80 TIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAG--DARFKPCTPHGIQKLLAAAGVDTEG 157 (297)
T ss_pred HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~ 308 (368)
|+|+|||||++||+|+++||+++ +||||+||++|++|++++++|||||+|+|+|++|+++|||+|++|||+|+|++
T Consensus 158 k~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gaiVIDvGin~~ 237 (297)
T PRK14167 158 ADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAAAGVPELIDGSMLSEGATVIDVGINRV 237 (297)
T ss_pred CEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEcccccc
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+ +.+ +.|.+++|||||+++.++|++||||||||||||++|||+|+++++++.++.
T Consensus 238 ~---~~~-~~g~kl~GDVd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~~~ 292 (297)
T PRK14167 238 D---ADT-EKGYELVGDVEFESAKEKASAITPVPGGVGPMTRAMLLYNTVKAASLQEGV 292 (297)
T ss_pred C---ccc-ccCCceeecCcHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhcCC
Confidence 4 212 112389999999999999999999999999999999999999999987764
No 15
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.4e-90 Score=667.26 Aligned_cols=279 Identities=48% Similarity=0.767 Sum_probs=270.7
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|++++++++++|+++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~ik~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I 80 (282)
T PRK14182 2 NLIDGKQIAAKVKGEVATEVRALAAR-GVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALI 80 (282)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 57999999999999999999999877 89999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc-cccCCHHHHHHHHHHhCCCCccc
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL-FIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~-~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
++||+|++|||||||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| ..+ |+||||+||+++|++|+++++||
T Consensus 81 ~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~~PcTp~avi~ll~~~~i~l~Gk 158 (282)
T PRK14182 81 ARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIG--IAGVPRPCTPAGVMRMLDEARVDPKGK 158 (282)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCC--CCCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999987 355 89999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+..
T Consensus 159 ~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~AvGk~~~i~~~~ik~gaiVIDvGin~~~---- 234 (282)
T PRK14182 159 RALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVAAIGKAELVKGAWVKEGAVVIDVGMNRLA---- 234 (282)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEeeceecC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+|+++|||||+++.++|+++|||||||||||++|||+|+++++++|.
T Consensus 235 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~~~~~~~ 281 (282)
T PRK14182 235 -----DGKLVGDVEFAAAAARASAITPVPGGVGPMTRAMLLVNTVELAKRTA 281 (282)
T ss_pred -----CCCeeCCCCHHHHHhhccEecCCCCCChHHHHHHHHHHHHHHHHHhc
Confidence 35899999999999999999999999999999999999999998874
No 16
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.5e-90 Score=669.14 Aligned_cols=287 Identities=47% Similarity=0.735 Sum_probs=275.3
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+.+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++
T Consensus 1 ~~~ildGk~iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (297)
T PRK14186 1 MALILDGKALAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEA 80 (297)
T ss_pred CCEEeehHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++|||||||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| ...|+||||.||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G 158 (297)
T PRK14186 81 LIAQLNQDERVDGILLQLPLPKHLDEVPLLHAIDPDKDADGLHPLNLGRLVKG--EPGLRSCTPAGVMRLLRSQQIDIAG 158 (297)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999977 5679999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|+++||+++|||||+||++|+++++++++|||||+|+|+|++++++|+|+|++|||+|+|+.+
T Consensus 159 k~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~ik~gavVIDvGin~~~--- 235 (297)
T PRK14186 159 KKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAAAGRPNLIGAEMVKPGAVVVDVGIHRLP--- 235 (297)
T ss_pred CEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+++. +|+++|||||+++.++|++||||||||||||++|||+|+++++++..+
T Consensus 236 ~~~~--~gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 287 (297)
T PRK14186 236 SSDG--KTRLCGDVDFEEVEPVAAAITPVPGGVGPMTVTMLLVNTVLSWQKRHG 287 (297)
T ss_pred cccc--CCceeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhC
Confidence 2221 368999999999999999999999999999999999999999987653
No 17
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=3.9e-90 Score=665.77 Aligned_cols=281 Identities=47% Similarity=0.740 Sum_probs=273.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
.+||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (286)
T PRK14184 2 LLLDGKATAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLI 81 (286)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999988789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~d~~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~av~~lL~~~~i~l~Gk~ 159 (286)
T PRK14184 82 AELNARPDIDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALG--LPGFRPCTPAGVMTLLERYGLSPAGKK 159 (286)
T ss_pred HHHhCCCcCceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999987 578999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhh----CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQR----HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~----~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~ 310 (368)
|+|||||++||+|+++||++ +|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+++.+
T Consensus 160 vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~AvG~p~li~~~~vk~GavVIDVGi~~~~- 238 (286)
T PRK14184 160 AVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAIGRPRFVTADMVKPGAVVVDVGINRTD- 238 (286)
T ss_pred EEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEecCCCCcCCHHHcCCCCEEEEeeeeccC-
Confidence 99999999999999999999 8999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++++|||||+++.++|++||||||||||||++|||+|+++++++..|+
T Consensus 239 ---------~~l~GDVdf~~v~~~a~~iTPVPGGVGp~Tva~Ll~N~~~a~~~~~~~ 286 (286)
T PRK14184 239 ---------DGLVGDCDFEGLSDVASAITPVPGGVGPMTIAQLLVNTVQSWKERVGL 286 (286)
T ss_pred ---------CCccCCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHHhhCC
Confidence 359999999999999999999999999999999999999999987774
No 18
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1e-89 Score=660.98 Aligned_cols=279 Identities=48% Similarity=0.791 Sum_probs=270.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I 81 (281)
T PRK14183 2 QILDGKALSDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETI 81 (281)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999874489999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (281)
T PRK14183 82 AMMNNNPNIDGILVQLPLPKHIDTTKILEAIDPKKDVDGFHPYNVGRLVTG--LDGFVPCTPLGVMELLEEYEIDVKGKD 159 (281)
T ss_pred HHHhCCCccCeEEEeCCCCCCCCHHHHHhccCchhcccccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999987 578999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||++||+|++++|+++|||||+||++|++|.+++++|||||+|+|+|++++++|||+|++|||+|+|+.+
T Consensus 160 vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~AvGkp~~i~~~~vk~gavvIDvGin~~~----- 234 (281)
T PRK14183 160 VCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVGVGKPNLITEDMVKEGAIVIDIGINRTE----- 234 (281)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCcccccCHHHcCCCcEEEEeeccccC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 364 (368)
+|+++|||||+++.+++++||||||||||||++|||+|+++++++.
T Consensus 235 ----~gkl~GDVd~~~~~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~ 280 (281)
T PRK14183 235 ----DGRLVGDVDFENVAKKCSYITPVPGGVGPMTIAMLLSNTLKAAKNR 280 (281)
T ss_pred ----CCCeECCccHHHHHhhceEecCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 3589999999999999999999999999999999999999999753
No 19
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=9.9e-90 Score=661.80 Aligned_cols=280 Identities=42% Similarity=0.702 Sum_probs=271.1
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
.+||||++|++|++++++++++++++.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|
T Consensus 2 ~ildGk~va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (282)
T PRK14180 2 ILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELI 81 (282)
T ss_pred ceeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999999887689999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.|+ ..+|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIivq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~-~~~~~PcTp~aii~lL~~y~i~l~Gk~ 160 (282)
T PRK14180 82 DQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRD-KKCLESCTPKGIMTMLREYGIKTEGAY 160 (282)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhhcCccccccccChhhHHHHhcCC-CCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 9999999999999999999999999999999999999999999999999773 378999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||++||+|+++||.++|||||+||++|++|.+++++|||||+|+|+|+||+++|||+|++|||+|+|+.+
T Consensus 161 vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsAvGkp~~i~~~~vk~gavVIDvGin~~~----- 235 (282)
T PRK14180 161 AVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVD----- 235 (282)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEccCCcCcCCHHHcCCCcEEEEecccccC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
|+++|||||+++.++|++||||||||||||++|||+|++++++++.
T Consensus 236 -----gkl~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~ 281 (282)
T PRK14180 236 -----GKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN 281 (282)
T ss_pred -----CceeCCcCHHHHHhhccEeccCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 4899999999999999999999999999999999999999998654
No 20
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.7e-89 Score=660.68 Aligned_cols=281 Identities=45% Similarity=0.776 Sum_probs=271.1
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+.+||||++|++|+++++++++.++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~va~~i~~~l~~~v~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~ 80 (284)
T PRK14193 2 TAIILDGKATADEIKADLAERVAALKEK-GITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNA 80 (284)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 4679999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.| ...|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~D~~V~GIlvqlPlP~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~G 158 (284)
T PRK14193 81 VIDELNADPACTGYIVQLPLPKHLDENAVLERIDPAKDADGLHPTNLGRLVLN--EPAPLPCTPRGIVHLLRRYDVELAG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCcccCccCCChhhhhHHhCC--CCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999977 5779999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhh--CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~--~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~ 310 (368)
|+|+|||||++||+|++++|++ +|||||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+|+..
T Consensus 159 k~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~AvGkp~~i~~~~ik~GavVIDvGin~~~- 237 (284)
T PRK14193 159 AHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAAAGVAHLVTADMVKPGAAVLDVGVSRAG- 237 (284)
T ss_pred CEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEecCCcCccCHHHcCCCCEEEEccccccC-
Confidence 9999999999999999999998 7999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+|+++|||| +++.++|++||||||||||||++|||+|+++++++..|
T Consensus 238 --------~gkl~GDvd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (284)
T PRK14193 238 --------DGKLVGDVH-PDVWEVAGAVSPNPGGVGPMTRAFLLTNVVERAERRAG 284 (284)
T ss_pred --------CCcEEeecC-HhHHhhCCEEeCCCCChhHHHHHHHHHHHHHHHHHhhC
Confidence 368999999 89999999999999999999999999999999987543
No 21
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.5e-89 Score=660.67 Aligned_cols=278 Identities=41% Similarity=0.727 Sum_probs=270.2
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
+.+||||++|++|++++++++++++++.+.+|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 3 ~~ildGk~ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~ 82 (284)
T PRK14177 3 PILLDGKKLSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGV 82 (284)
T ss_pred CeEeEhHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 67999999999999999999999998877889999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||
T Consensus 83 I~~lN~D~~V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~ll~~y~i~l~Gk 160 (284)
T PRK14177 83 IDKLNLDPNVDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMG--VETYLPCTPYGMVLLLKEYGIDVTGK 160 (284)
T ss_pred HHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcC--CCCCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 57899999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++|+++|||+|++|||+|+|+
T Consensus 161 ~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsAvGk~~~i~~~~ik~gavVIDvGin~------ 234 (284)
T PRK14177 161 NAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGAVGKPEFIKADWISEGAVLLDAGYNP------ 234 (284)
T ss_pred EEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEeCCCcCccCHHHcCCCCEEEEecCcc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+++|||||+++.++|++||||||||||||++|||+|+++++++.+.
T Consensus 235 -------~~~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~~ 280 (284)
T PRK14177 235 -------GNVGDIEISKAKDKSSFYTPVPGGVGPMTIAVLLLQTLYSFKEHFT 280 (284)
T ss_pred -------cccCCcCHHHHhhhccEecCCCCCChHHHHHHHHHHHHHHHHhccC
Confidence 3789999999999999999999999999999999999999987653
No 22
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.3e-89 Score=660.24 Aligned_cols=281 Identities=43% Similarity=0.762 Sum_probs=272.7
Q ss_pred cceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679 72 QTATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL 151 (368)
Q Consensus 72 ~~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~ 151 (368)
.|+++||||++|++|+++++++++.++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||+
T Consensus 6 ~~~~ildGk~iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~ 85 (287)
T PRK14176 6 YESRIIDGKALAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELL 85 (287)
T ss_pred cceEEEEhHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHH
Confidence 56899999999999999999999999887789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679 152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM 231 (368)
Q Consensus 152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~ 231 (368)
+.|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++
T Consensus 86 ~~I~~LN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g--~~~~~PcTp~av~~ll~~~~i~l~ 163 (287)
T PRK14176 86 ELIDSLNKRKDVHGILLQLPLPKHLDPQEAMEAIDPAKDADGFHPYNMGKLMIG--DEGLVPCTPHGVIRALEEYGVDIE 163 (287)
T ss_pred HHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCccccccccChhhhhhHhcC--CCCCCCCcHHHHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999987 578999999999999999999999
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~ 311 (368)
||+|+|||||++||+|++++|+++|||||+||++|+++.+++++|||||+|+|+|++|+++|+++|++|||+|+|+.+
T Consensus 164 Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvv~AvG~p~~i~~~~vk~gavVIDvGin~~~-- 241 (287)
T PRK14176 164 GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKYTLDADILVVATGVKHLIKADMVKEGAVIFDVGITKEE-- 241 (287)
T ss_pred CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHHHhhCCEEEEccCCccccCHHHcCCCcEEEEecccccC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999743
Q ss_pred CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364 (368)
Q Consensus 312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 364 (368)
|+++|||||+++.++|+++|||||||||||++|||+|+++++++.
T Consensus 242 --------gkl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~ 286 (287)
T PRK14176 242 --------DKVYGDVDFENVIKKASLITPVPGGVGPLTIAMLMKHVLMCAEKS 286 (287)
T ss_pred --------CCccCCcCHHHHHhhceEcCCCCCCChHHHHHHHHHHHHHHHHhc
Confidence 589999999999999999999999999999999999999998754
No 23
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.8e-89 Score=660.96 Aligned_cols=280 Identities=43% Similarity=0.710 Sum_probs=267.0
Q ss_pred eeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHH
Q 017679 76 VIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALS 155 (368)
Q Consensus 76 ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~ 155 (368)
+||||++|++|+++++++++++ +++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+|+++.|+
T Consensus 2 ildGk~iA~~i~~~~k~~v~~l----~~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~ 77 (287)
T PRK14181 2 LLKGAPAAEHILATIKENISAS----STAPGLAVVLIGNDPASEVYVGMKVKKATDLGMVSKAHRLPSDATLSDILKLIH 77 (287)
T ss_pred eeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHH
Confidence 7999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceE
Q 017679 156 NYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNA 235 (368)
Q Consensus 156 ~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~V 235 (368)
+||+|++|||||||+|||+|+++++++++|+|+|||||+||.|+|+|+.|+ .++|+||||+||+++|++|+++++||+|
T Consensus 78 ~lN~d~~V~GIlvqlPlP~~i~~~~i~~~I~p~KDVDGl~p~n~g~l~~g~-~~~~~PcTp~avi~lL~~~~i~l~Gk~v 156 (287)
T PRK14181 78 RLNNDPNIHGILVQLPLPKHLDAQAILQAISPDKDVDGLHPVNMGKLLLGE-TDGFIPCTPAGIIELLKYYEIPLHGRHV 156 (287)
T ss_pred HHhCCCCCCeEEEcCCCCCCcCHHHHHhccCcccCcccCChhhHHHHhcCC-CCCCCCCCHHHHHHHHHHhCCCCCCCEE
Confidence 999999999999999999999999999999999999999999999999874 3679999999999999999999999999
Q ss_pred EEEccCccchHHHHHHHhhC----CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679 236 VVIGRSNIVGLPTSLLLQRH----HATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311 (368)
Q Consensus 236 vVIG~g~~VGrpla~lL~~~----gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~ 311 (368)
+|||||++||+|+++||+++ |||||+||++|+++++++++|||||+|+|+|++|+++|+|+|++|||+|+|++.
T Consensus 157 vViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~~~~~~ADIvV~AvG~p~~i~~~~ik~GavVIDvGin~~~-- 234 (287)
T PRK14181 157 AIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLTEILKTADIIIAAIGVPLFIKEEMIAEKAVIVDVGTSRVP-- 234 (287)
T ss_pred EEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEEEecccccc--
Confidence 99999999999999999999 899999999999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364 (368)
Q Consensus 312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 364 (368)
+... ++.+++|||||+++.++|+++|||||||||||++|||+|++++++++
T Consensus 235 -~~~~-~g~kl~GDVd~e~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 285 (287)
T PRK14181 235 -AANP-KGYILVGDVDFNNVVPKCRAITPVPGGVGPMTVAMLMRNTWESYLRH 285 (287)
T ss_pred -cccC-CCCeeEeccchHHHHhhcccccCCCCchHHHHHHHHHHHHHHHHHhh
Confidence 1111 12289999999999999999999999999999999999999999865
No 24
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.1e-89 Score=658.13 Aligned_cols=281 Identities=47% Similarity=0.788 Sum_probs=272.9
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
+.+||||++|++|++++++++++++++ |++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+|+++.
T Consensus 3 ~~ildGk~va~~i~~~lk~~i~~l~~~-g~~p~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~ 81 (285)
T PRK14189 3 AQLIDGNALSKQLRAEAAQRAAALTAR-GHQPGLAVILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADLSEAELLAR 81 (285)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 679999999999999999999999876 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||
T Consensus 82 I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~Gk 159 (285)
T PRK14189 82 IDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTG--QPLFRPCTPYGVMKMLESIGIPLRGA 159 (285)
T ss_pred HHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCC--CCCCcCCCHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999977 57899999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|++++|.++|||||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+|+..
T Consensus 160 ~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG~~~~i~~~~ik~gavVIDVGin~~~---- 235 (285)
T PRK14189 160 HAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVGKRNVLTADMVKPGATVIDVGMNRDD---- 235 (285)
T ss_pred EEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCCCcCccCHHHcCCCCEEEEccccccC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+|+++|||||+++.++|++||||||||||||++|||+|++++++++..
T Consensus 236 -----~gkl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~Ll~N~~~a~~~~~~ 283 (285)
T PRK14189 236 -----AGKLCGDVDFAGVKEVAGYITPVPGGVGPMTITMLLVNTIEAAERAAA 283 (285)
T ss_pred -----CCCeeCCccHHHHHhhceEecCCCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999999999999999999999998764
No 25
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=4.1e-89 Score=658.34 Aligned_cols=282 Identities=48% Similarity=0.786 Sum_probs=274.1
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
+.+||||++|++|++++++++++|+++.+++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 3 ~~ildGk~va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~ 82 (285)
T PRK10792 3 AKIIDGKTIAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLAL 82 (285)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 67999999999999999999999988777899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++||
T Consensus 83 I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk 160 (285)
T PRK10792 83 IDELNADPTIDGILVQLPLPAHIDNVKVLERIHPDKDVDGFHPYNVGRLAQR--IPLLRPCTPRGIMTLLERYGIDTYGL 160 (285)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccccCccChhhHhHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999977 57899999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|++++|+++|||||+||++|++|++++++|||||+|+|+|++|+++|+++|++|||+|+|+++
T Consensus 161 ~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvi~avG~p~~v~~~~vk~gavVIDvGin~~~---- 236 (285)
T PRK10792 161 NAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHVRNADLLVVAVGKPGFIPGEWIKPGAIVIDVGINRLE---- 236 (285)
T ss_pred EEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHHhhCCEEEEcCCCcccccHHHcCCCcEEEEccccccc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 314 PSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 314 ~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+|+++|||||+++.++|+++|||||||||||++|||+|+++++++|.+
T Consensus 237 -----~gk~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~N~~~a~~~~~~ 284 (285)
T PRK10792 237 -----DGKLVGDVEFETAAERASWITPVPGGVGPMTVATLLENTLQACEEYHD 284 (285)
T ss_pred -----CCCcCCCcCHHHHHhhccCcCCCCCCChHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999999999999999999999998874
No 26
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-88 Score=655.48 Aligned_cols=282 Identities=46% Similarity=0.782 Sum_probs=274.5
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++++++.|++|+||+|++|+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~ildGk~ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~ 80 (284)
T PRK14179 1 MTEIIDGKALAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLD 80 (284)
T ss_pred CCeEEEhHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998877899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~G 158 (284)
T PRK14179 81 LIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSG--RPVMIPCTPAGIMEMFREYNVELEG 158 (284)
T ss_pred HHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999976 6789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||+|++||+|+|++|+++|||||+||++|+++++++++|||||+|+|+|++|+.+|+++|++|||+|+|+..
T Consensus 159 k~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVIDvgin~~~--- 235 (284)
T PRK14179 159 KHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVIDVGMNRDE--- 235 (284)
T ss_pred CEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEEecceecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+|+++|||||+++.++|++||||||||||||++|||+|+++++++|+
T Consensus 236 ------~gkl~GDVdf~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (284)
T PRK14179 236 ------NGKLIGDVDFDEVAEVASYITPVPGGVGPMTITMLMEQTYQAALRSL 282 (284)
T ss_pred ------CCCeecCccHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999999999999999886
No 27
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-88 Score=655.35 Aligned_cols=280 Identities=46% Similarity=0.745 Sum_probs=272.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~il~Gk~~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I 81 (285)
T PRK14191 2 VLLDGKALSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLI 81 (285)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 58999999999999999999999877789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g--~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (285)
T PRK14191 82 KDLNTDQNIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQ--LDGFVPATPMGVMRLLKHYHIEIKGKD 159 (285)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999987 578999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||++||+|+|++|+++|||||+||++|++|.+++++|||||+|+|+|++++++|+|+|++|||+|+|+++
T Consensus 160 vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~AvG~p~~i~~~~vk~GavVIDvGi~~~~----- 234 (285)
T PRK14191 160 VVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVGVGKPDLIKASMVKKGAVVVDIGINRLN----- 234 (285)
T ss_pred EEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEecCCCCcCCHHHcCCCcEEEEeeccccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+|+++|||||+++.+++++||||||||||||++|||+|+++++++..
T Consensus 235 ----~gklvGDvd~e~v~~~a~~iTPVPGGVGpvT~a~L~~N~~~a~~~~~ 281 (285)
T PRK14191 235 ----DGRLVGDVDFENVAPKASFITPVPGGVGPMTIVSLLENTLIAAEKRQ 281 (285)
T ss_pred ----CCceeccccHHHHhhhccEEecCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999998653
No 28
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=5.7e-88 Score=650.98 Aligned_cols=278 Identities=42% Similarity=0.707 Sum_probs=266.4
Q ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHH
Q 017679 74 ATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNA 153 (368)
Q Consensus 74 a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~ 153 (368)
+.+||||++|++|+++++++++++ +++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.
T Consensus 3 ~~il~Gk~vA~~i~~~l~~~v~~l----~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~ 78 (287)
T PRK14173 3 ARELSGPPAAEAVYAELRARLAKL----PFVPHLRVVRLGEDPASVSYVRLKDRQAKALGLRSQVEVLPESTSQEELLEL 78 (287)
T ss_pred CeEeeHHHHHHHHHHHHHHHHHHh----CCCCcEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHH
Confidence 679999999999999999999987 4789999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccc
Q 017679 154 LSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGK 233 (368)
Q Consensus 154 I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK 233 (368)
|++||+|++||||+||+|||+|+++.+++++|+|+|||||||+.|+|+|+.| .+.|+||||+||+++|++|+++++||
T Consensus 79 I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~avi~lL~~~~i~l~Gk 156 (287)
T PRK14173 79 IARLNADPEVDGILVQLPLPPHIDFQRVLEAIDPLKDVDGFHPLNVGRLWMG--GEALEPCTPAGVVRLLKHYGIPLAGK 156 (287)
T ss_pred HHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCccccccccChhhhHHHhcC--CCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999987 46799999999999999999999999
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVD 313 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d 313 (368)
+|+|||||++||+|++++|+++|||||+||++|+++++++++|||||+|+|+|++++++|||+|++|||+|+|++. +
T Consensus 157 ~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsAvGkp~~i~~~~vk~GavVIDVGin~~~---~ 233 (287)
T PRK14173 157 EVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVAVGRPHLITPEMVRPGAVVVDVGINRVG---G 233 (287)
T ss_pred EEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEEEccCcccc---C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999852 1
Q ss_pred CCCCCCcE--EEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 314 PSCEYGYR--LMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 314 ~t~~~~~k--l~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
+ +|+ ++|||| +++.++|++||||||||||||++|||+|+++++++..
T Consensus 234 ~----~gk~~l~GDVd-~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 282 (287)
T PRK14173 234 N----GGRDILTGDVH-PEVAEVAGALTPVPGGVGPMTVAMLMANTVIAALRRR 282 (287)
T ss_pred C----CCceeeecccc-HhHHhhCcEEecCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 1 246 999999 6889999999999999999999999999999998754
No 29
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=8.7e-88 Score=650.18 Aligned_cols=283 Identities=47% Similarity=0.804 Sum_probs=273.8
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+.+||||++|++|+++++++++.|+++ |++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 2 ~~~il~Gk~ia~~i~~~~~~~v~~l~~~-g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~ 80 (286)
T PRK14175 2 VAKILDGKQIAKDYRQGLQDQVEALKEK-GFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLN 80 (286)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 4679999999999999999999999876 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+|+++++++|+|+|||||+|+.|+|+|+.| .++|+||||.||+++|++|+++++|
T Consensus 81 ~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~l~G 158 (286)
T PRK14175 81 ELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYID--EQTFVPCTPLGIMEILKHADIDLEG 158 (286)
T ss_pred HHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcC--CCCCCCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|++++|.++||+||+||++|+++.+++++|||||+|+|+|++|+++|+++|++|||+|+++..
T Consensus 159 k~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsAvg~p~~i~~~~vk~gavVIDvGi~~~~--- 235 (286)
T PRK14175 159 KNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSAVGKPGLVTKDVVKEGAVIIDVGNTPDE--- 235 (286)
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEECCCCCcccCHHHcCCCcEEEEcCCCcCC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999854
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+|+++|||||+++.++++++|||||||||||++|||+|+++++++..++
T Consensus 236 ------~gkl~GDvd~~~~~~~a~~iTPVPGGVGp~T~a~L~~n~~~a~~~~~~~ 284 (286)
T PRK14175 236 ------NGKLKGDVDYDAVKEIAGAITPVPGGVGPLTITMVLNNTLLAEKMRRGI 284 (286)
T ss_pred ------CCCeecCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3589999999999999999999999999999999999999999987765
No 30
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.7e-87 Score=650.67 Aligned_cols=289 Identities=48% Similarity=0.792 Sum_probs=274.0
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
.+||||++|++|++++++++++++++.|++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 2 ~il~Gk~iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 81 (295)
T PRK14174 2 LIIDGKKVSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKI 81 (295)
T ss_pred EEEeHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 47999999999999999999999887789999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+|+.+++++|+|+|||||+|+.|+|+|+.|+..++|+||||+||+++|++|+++++||+
T Consensus 82 ~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~ 161 (295)
T PRK14174 82 EDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKH 161 (295)
T ss_pred HHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCE
Confidence 99999999999999999999999999999999999999999999999998753478999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhh----CCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQR----HHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDV 310 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~----~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~ 310 (368)
|+|||||++||+|+++||++ +|++||+||++|.++++++++|||||+|+|+|++|+++|+|+|++|||+|+++++
T Consensus 162 vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Avg~~~li~~~~vk~GavVIDVgi~~~~- 240 (295)
T PRK14174 162 CVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAIGKARFITADMVKPGAVVIDVGINRIE- 240 (295)
T ss_pred EEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEecCccCccCHHHcCCCCEEEEeeccccc-
Confidence 99999999999999999998 7899999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 311 SVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 311 ~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+++++.+.+++|||||+++.++|++||||||||||||++|||+|+++++++...
T Consensus 241 --~~~~~~g~kl~GDVd~~~v~~~a~~iTPVPGGVGp~T~a~L~~Nl~~a~~~~~~ 294 (295)
T PRK14174 241 --DPSTKSGYRLVGDVDYEGVSAKASAITPVPGGVGPMTIAMLLKNTLQSFERVNN 294 (295)
T ss_pred --cccccCCCceECCcCHHHHHhhccEecCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 322222338999999999999999999999999999999999999999987653
No 31
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.9e-86 Score=644.12 Aligned_cols=283 Identities=47% Similarity=0.802 Sum_probs=273.2
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
++.+||||++|++|++++++++++++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 3 ~~~il~Gk~iA~~i~~~lk~~i~~l~~~-g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~ 81 (301)
T PRK14194 3 SAKLIDGKAAAARVLAQVREDVRTLKAA-GIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLA 81 (301)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 4679999999999999999999999877 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+|+.+++++|+|+||||||||.|+|+|+.| .++|+||||.||+++|++|+++++|
T Consensus 82 ~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~--~~~~~PcTp~aii~lL~~~~i~l~G 159 (301)
T PRK14194 82 LIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQG--RDVLTPCTPSGCLRLLEDTCGDLTG 159 (301)
T ss_pred HHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcC--CCCCCCCcHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999987 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||+|++||+|+|.+|+++|++||+||++|+++++.+++|||||+++|.|++++++|+++|++|||+|+|++.
T Consensus 160 k~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~GaiVIDvgin~~~--- 236 (301)
T PRK14194 160 KHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAVVIDVGINRID--- 236 (301)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcEEEEecccccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCc--EEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 313 DPSCEYGY--RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 313 d~t~~~~~--kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+ +| +++|||||+++.++|++||||||||||||++|||+|+++++++|+.
T Consensus 237 ~-----~g~~kl~GDvdf~~~~~~a~~iTPVPGGVGp~Tva~L~~N~~~a~~~~~~ 287 (301)
T PRK14194 237 D-----DGRSRLVGDVDFDSALPVVSAITPVPGGVGPMTIAFLMKNTVTAARLQAH 287 (301)
T ss_pred C-----CCCcceecccchHHHHhhcceecCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 1 23 8999999999999999999999999999999999999999998863
No 32
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.1e-86 Score=637.94 Aligned_cols=274 Identities=46% Similarity=0.733 Sum_probs=266.3
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++||||++|++|+++++++++++ |++|+||+|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++.|
T Consensus 1 ~il~Gk~~a~~i~~~~~~~v~~l----g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I 76 (279)
T PRK14178 1 MILDGKAVSEKRLELLKEEIIES----GLYPRLATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERI 76 (279)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHh----CCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHH
Confidence 37999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccce
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKN 234 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~ 234 (368)
++||+|++||||+||+|||+|+|+++++++|+|+|||||||+.|+|+|+.| .++|+||||.|++++|++|+++++||+
T Consensus 77 ~~lN~D~~V~GIlvqlPLp~~i~~~~v~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~av~~ll~~~~i~l~Gk~ 154 (279)
T PRK14178 77 RRLNEDPDINGILVQLPLPKGVDTERVIAAILPEKDVDGFHPLNLGRLVSG--LPGFAPCTPNGIMTLLHEYKISIAGKR 154 (279)
T ss_pred HHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccCcccCChhhHHHHhCC--CCCCCCCCHHHHHHHHHHcCCCCCCCE
Confidence 999999999999999999999999999999999999999999999999976 578999999999999999999999999
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
|+|||||..||+|++++|.++||+||+||++|+++.+++++|||||+|+|+|++|+++|+|+|++|||+|+++.+
T Consensus 155 V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~lv~~~~vk~GavVIDVgi~~~~----- 229 (279)
T PRK14178 155 AVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGFITPDMVKPGATVIDVGINQVN----- 229 (279)
T ss_pred EEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccccCHHHcCCCcEEEEeeccccC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHH
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRA 364 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~ 364 (368)
||++|||||+++.++++++|||||||||||++|||+|+++++++.
T Consensus 230 -----gkl~GDvdf~~~~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~ 274 (279)
T PRK14178 230 -----GKLCGDVDFDAVKEIAGAITPVPGGVGPMTIATLMENTFDAAKMR 274 (279)
T ss_pred -----CCCcCCccHHHHHhhccCcCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999864
No 33
>KOG4230 consensus C1-tetrahydrofolate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=1.4e-85 Score=665.76 Aligned_cols=290 Identities=50% Similarity=0.830 Sum_probs=283.8
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcC-CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSI-GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVL 151 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~-g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~ 151 (368)
+|.||+|+.+|++++++++++++.+|+.. +++|.|+|||||++++|..|+|||.|+++++||++.+++||++++|-||+
T Consensus 2 ~a~IL~Gk~la~kvr~~v~~eI~~ik~~~PnF~p~LaIiQVGnR~DSnvYVrmKlKAA~e~Gid~~~iklPetiTe~ell 81 (935)
T KOG4230|consen 2 VAEILSGKELARKVREDVAEEIQSIKEHHPNFKPVLAIIQVGNREDSNVYVRMKLKAAKEIGIDAKHIKLPETITEGELL 81 (935)
T ss_pred cchhhccHHHHHHHHHHHHHHHHHHHhhCCCCCceEEEEEecCcCCcceeehhhhhHHHhcCCceEEecCcccccHHHHH
Confidence 47899999999999999999999999876 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCc
Q 017679 152 NALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIM 231 (368)
Q Consensus 152 ~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~ 231 (368)
..|.+||+|+.||||+||+|||.|+|++.+.++|+|+||||||+.+|.|+|..++.++.|+||||.|||+||+++++.+.
T Consensus 82 ~~I~~lNeD~tvHGiiVQLPLp~hide~~Vt~aI~peKDVDGf~~~NaG~Lak~~g~p~f~PCTPkGcmeLlk~a~v~v~ 161 (935)
T KOG4230|consen 82 REIKALNEDPTVHGIIVQLPLPAHIDEDTVTEAIDPEKDVDGFTRINAGRLAKGEGQPTFIPCTPKGCMELLKEAGVFVA 161 (935)
T ss_pred HHHHhccCCCccceEEEeccCccccchhhHhhccCcccccccccccchhhhhccCCCceeeccChHHHHHHHHHcCCccc
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVS 311 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~ 311 (368)
||++||+|||.+||.|++.+|...++|||+|||+|+++.+++.+|||||.|+|.|+||+.||+|||++|||||+|++.
T Consensus 162 Gk~aVVlGRS~IVG~Pia~LL~~~NaTVTiCHSKT~~lae~v~~ADIvIvAiG~PefVKgdWiKpGavVIDvGINyvp-- 239 (935)
T KOG4230|consen 162 GKNAVVLGRSKIVGSPIAALLLWANATVTICHSKTRNLAEKVSRADIVIVAIGQPEFVKGDWIKPGAVVIDVGINYVP-- 239 (935)
T ss_pred cceeEEEecccccCChHHHHHHhcCceEEEecCCCccHHHHhccCCEEEEEcCCcceeecccccCCcEEEEccccccC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 312 VDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 312 ~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
|+++.+|.|++|||||+++++++++||||||||||||+||||+|++++++|+.
T Consensus 240 -D~~Kksg~klvGDVdfe~Akevas~ITPVPGGVGPMTVAMLmqNtveaAKR~r 292 (935)
T KOG4230|consen 240 -DPSKKSGFKLVGDVDFESAKEVASFITPVPGGVGPMTVAMLMQNTVEAAKRQR 292 (935)
T ss_pred -CCCCcccceEeeecchHhhhhhhhccccCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 88877788999999999999999999999999999999999999999999875
No 34
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=2.3e-84 Score=629.62 Aligned_cols=287 Identities=48% Similarity=0.787 Sum_probs=273.1
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+.+||||++|++|++++++++++|+++.|++|+|++|+||+||+|..|+++|.|+|+++||+++.++||++++|+||++
T Consensus 1 ~~~il~Gk~~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~ 80 (296)
T PRK14188 1 MATIIDGKAFAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLA 80 (296)
T ss_pred CCEEEEHHHHHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHH
Confidence 57899999999999999999999998777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+++.+++++|+|+|||||+|+.|+|+|+.| .++|+||||+||+++|++|+++++|
T Consensus 81 ~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~--~~~~~PcTp~ai~~ll~~~~i~~~G 158 (296)
T PRK14188 81 LIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATG--ETALVPCTPLGCMMLLRRVHGDLSG 158 (296)
T ss_pred HHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCC--CCCCcCCCHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999977 6789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||+.||+|+|.+|+++|++|++||++|+++++.+++|||||+++|.|++++.+|+++|++|||+|+|++.
T Consensus 159 k~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsavg~~~~v~~~~lk~GavVIDvGin~~~--- 235 (296)
T PRK14188 159 LNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAAVGRPEMVKGDWIKPGATVIDVGINRIP--- 235 (296)
T ss_pred CEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhhcchheecCCCEEEEcCCcccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred CCCCCCCc--EEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 313 DPSCEYGY--RLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 313 d~t~~~~~--kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
++.+. .| +++|||||+++.++|++||||||||||||++|||+|+++++++..
T Consensus 236 ~~~~~-~g~~~l~GDvd~~~v~~~a~~iTPVPGGVGp~T~a~L~~N~~~a~~~~~ 289 (296)
T PRK14188 236 APEKG-EGKTRLVGDVAFAEAAEVAGAITPVPGGVGPMTIACLLANTLTAACRAA 289 (296)
T ss_pred Ccccc-CCCceeeCCCCHHHHHhhccEecCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 11100 13 799999999999999999999999999999999999999998754
No 35
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=100.00 E-value=1.1e-80 Score=601.51 Aligned_cols=282 Identities=41% Similarity=0.693 Sum_probs=272.3
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
|+++||||++|++|++++++++++++++.|++|+|++|+||+||+|..|+++|+++|+++||+++++.||++++++||.+
T Consensus 2 ~~~~l~gk~~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~ 81 (283)
T PRK14192 2 MALVLDGKALAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLA 81 (283)
T ss_pred CCeEeeHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHH
Confidence 46799999999999999999999999887899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|++||+|++||||+||+|||+|+++++++++|+|+|||||+|+.|.|+|+.| .+.|.||||.|++++|++|+++++|
T Consensus 82 ~i~~Ln~d~~v~Gi~VqlPlp~~i~~~~~ld~I~~aKDVdg~n~~n~G~l~~~--~~~~~p~T~~gii~~L~~~~i~l~G 159 (283)
T PRK14192 82 KIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFGRMAMG--EAAYGSATPAGIMRLLKAYNIELAG 159 (283)
T ss_pred HHHHHhCCCCCCEEEEeCCCccccCHHHHHhccCHHHhcCCCCccccCccccC--CCcccCCcHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999977 5789999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
|+|+|||||++||+|++++|+++||+||+|||++++|.+.+++|||||+|||+|++++.+|+++|++|||+||++.+
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~~~~~aDIvI~AtG~~~~v~~~~lk~gavViDvg~n~~~--- 236 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPELVKQADIIVGAVGKPELIKKDWIKQGAVVVDAGFHPRD--- 236 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHHHhccCCEEEEccCCCCcCCHHHcCCCCEEEEEEEeecC---
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
++++|||||+++.+++++||||||||||||++|||+|+++++++.+|
T Consensus 237 -------~~~~GDvd~~~~~~~a~~itPvPGGVGp~T~a~L~~n~~~~~~~~~~ 283 (283)
T PRK14192 237 -------GGGVGDIELQGIEEIASAYTPVPGGVGPMTINTLIRQTVEAAEKALG 283 (283)
T ss_pred -------CCCcccccHHHhhccceEeCCCCCcChHHHHHHHHHHHHHHHHHhcC
Confidence 35899999999999999999999999999999999999999998765
No 36
>KOG0089 consensus Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase [Coenzyme transport and metabolism]
Probab=100.00 E-value=2.5e-80 Score=584.10 Aligned_cols=291 Identities=59% Similarity=0.899 Sum_probs=280.8
Q ss_pred ceeeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHH
Q 017679 73 TATVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLN 152 (368)
Q Consensus 73 ~a~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~ 152 (368)
++.+++||.+|+.+++++.++++.+++..|..|+|+.++||+||+|+.|+.+|+|+|+++||.++.+.||++.+++++++
T Consensus 7 ~~~viagk~~a~~i~~~i~~e~~~~~~~~g~~P~L~~~lvg~~pas~~Ya~~k~kac~~vGi~s~~~~l~~~~~~~~l~~ 86 (309)
T KOG0089|consen 7 TAVVIAGKVAATFIRQEIANEVEGMKESNGKVPGLVGFLVGEDPASQMYATNKTKACEEVGIKSFQYELPESESEDELES 86 (309)
T ss_pred ceEEEehhHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEeCCCcchHHHHHHHHHHHHHhhhcccccccccccCHHHHHH
Confidence 68899999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCcc
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMG 232 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~G 232 (368)
.|.++|+|++||||+||+|+|+|+++++|++.++|+|||||||+.|.|+|.+.++.+.|+||||.||+++|+++++.+.|
T Consensus 87 ~i~~~N~d~sV~GilV~~pv~~h~~eq~i~n~Vs~eKDVDgfh~~Nigrl~ld~~~~~~lPcTP~gv~eiL~r~gI~~~G 166 (309)
T KOG0089|consen 87 AIAEANNDPSVHGILVQLPVPQHIQEQYILNAVSPEKDVDGFHPLNIGRLALDGREPLFLPCTPLGVVEILERTGIETYG 166 (309)
T ss_pred HHHHhcCCCceeeEEEEeeccccccHHHHHhhcCcccccccccccchhhhccccccccccCCchHHHHHHHHHhCCeecC
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred ceEEEEccCccchHHHHHHHhhC--------CCEEEEEeCCCC--CHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEE
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRH--------HATVSIVHALTK--NPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLD 302 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~--------gAtVti~h~~t~--~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVID 302 (368)
|+++|+|||++||+|+|++|++. .||||++||.|+ +++.++++|||+|+|+|.|++|+.||+|+|+.|||
T Consensus 167 Kn~VVigRS~iVg~P~A~LL~~dG~~~~~~~datVti~hr~t~~~~lk~ht~~adivi~a~g~p~li~~d~Ik~Ga~vid 246 (309)
T KOG0089|consen 167 KNAVVIGRSKIVGMPLALLLHNDGAHVYSVDDATVTIFHRYTSKPQLKHHTRDADIVISAVGIPNLITSDMIKPGAAVID 246 (309)
T ss_pred ceEEEEcccccccchHHHHHhhcCCcccccCcceEEEEEcCCCchhHHHHHHhcceeehhcCCCcccccceeecCceeEe
Confidence 99999999999999999999998 689999999996 46899999999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhC
Q 017679 303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~ 366 (368)
+|+|++. |+++..+.+|+|||||++++++|++||||||||||||+||||+|+++++++.+.
T Consensus 247 vgin~v~---dp~~a~~~klvgdvdFe~~~~kag~itpVPggvGpmTiAMLl~Ntl~~ak~v~~ 307 (309)
T KOG0089|consen 247 VGINRVH---DPSTAVGIKLVGDVDFEEASKKAGAITPVPGGVGPMTIAMLLRNTLRAAKRVFL 307 (309)
T ss_pred cCCCccc---ccccceeeEEeeeccHHHhhhhcCccccCCCCCCchhHHHHHHHHHHHHHHHhc
Confidence 9999998 776555679999999999999999999999999999999999999999998764
No 37
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=100.00 E-value=4.9e-53 Score=377.90 Aligned_cols=160 Identities=54% Similarity=0.864 Sum_probs=139.4
Q ss_pred CcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhcc
Q 017679 195 HPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITS 274 (368)
Q Consensus 195 ~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~ 274 (368)
||+|+|+|+.| ++.|+||||+|++++|++|+++++||+|+|||||++||+|++++|+++|||||+||++|++++++++
T Consensus 1 hp~N~g~l~~~--~~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~ 78 (160)
T PF02882_consen 1 HPLNLGRLVSG--QPGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR 78 (160)
T ss_dssp SHHHHHHHHTT--TTSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT
T ss_pred CcHhHHHHhCC--CCCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee
Confidence 79999999987 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHH
Q 017679 275 EADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL 354 (368)
Q Consensus 275 ~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl 354 (368)
+|||||+|+|+|++|+++|+|+|++|||+|+++.. .+++++|||||++++++++++|||||||||||++|||
T Consensus 79 ~ADIVVsa~G~~~~i~~~~ik~gavVIDvG~~~~~--------~~~~~~GDv~~~~~~~~a~~itPvPgGVGplT~a~L~ 150 (160)
T PF02882_consen 79 RADIVVSAVGKPNLIKADWIKPGAVVIDVGINYVP--------GDGKLVGDVDFESVKEKASAITPVPGGVGPLTVAMLM 150 (160)
T ss_dssp TSSEEEE-SSSTT-B-GGGS-TTEEEEE--CEEET--------TTTEEEESB-HHHHHTTCSEEE-SSSSCHHHHHHHHH
T ss_pred eccEEeeeeccccccccccccCCcEEEecCCcccc--------ccceeeecccHHHhhccceEEeeCCCCccHHHHHHHH
Confidence 99999999999999999999999999999999872 1479999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 017679 355 SNTLDSAKRA 364 (368)
Q Consensus 355 ~N~v~a~~~~ 364 (368)
+|++++++++
T Consensus 151 ~N~v~a~~~~ 160 (160)
T PF02882_consen 151 KNLVKAAKRQ 160 (160)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 38
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=4.9e-47 Score=347.36 Aligned_cols=158 Identities=31% Similarity=0.441 Sum_probs=144.4
Q ss_pred cccccCccCcceeeeccccCC-------cCccccCCHHHHHHHHHHhCC---------CCccceEEEEccCccchHHHHH
Q 017679 187 LEKDVDGFHPLNIGNLAMRGR-------EPLFIPCTPKGCIELLIRSGV---------EIMGKNAVVIGRSNIVGLPTSL 250 (368)
Q Consensus 187 p~KDVDgl~~~N~G~L~~g~~-------~~~~~PcTa~gv~~lL~~~~i---------~l~GK~VvVIG~g~~VGrpla~ 250 (368)
|+|||||+|+.|+|+|+.|.. .++|+||||+||+++|++|++ +++||+|+|||||++||+|+++
T Consensus 1 P~KDVDGl~~~n~g~l~~~~~~~~~~~~~~~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCcCCCCHHHHHHHhcCCccccccccCCCccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHH
Confidence 789999999999999987642 268999999999999999977 8999999999999999999999
Q ss_pred HHhhCCCEEEEE---------------eCCC--CC----HhhhccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecCCC
Q 017679 251 LLQRHHATVSIV---------------HALT--KN----PEQITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 251 lL~~~gAtVti~---------------h~~t--~~----L~~~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n~~ 308 (368)
||+++|||||+| |++| ++ +.+++++|||||+|+|+|+| |++||||+|++|||+|++.
T Consensus 81 lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~~d~ik~GavVIDVGi~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccCHHHcCCCcEEEEcCCCc-
Confidence 999999999999 6776 45 88999999999999999999 9999999999999999873
Q ss_pred CCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHh
Q 017679 309 DVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~ 365 (368)
|+| +++.++|+++||| |||||++|||+|+++++++++
T Consensus 160 ----------------dvd-~~v~~~as~iTPv---VGpvTva~L~~Nlv~~~~~~~ 196 (197)
T cd01079 160 ----------------NFE-PSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQH 196 (197)
T ss_pred ----------------Ccc-HhHHhhcCEeCCC---cCHHHHHHHHHHHHHHHHHhc
Confidence 344 6788999999998 999999999999999998654
No 39
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=100.00 E-value=4.6e-41 Score=303.00 Aligned_cols=168 Identities=58% Similarity=0.918 Sum_probs=158.2
Q ss_pred cccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 187 LEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 187 p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
|+|||||++..|.|+++.+ ...|+|||+.+++++++++..+++||+|+|||+|+++|++++.+|.++|++|++++|++
T Consensus 1 ~~kdvdg~~~~~~~~~~~~--~~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 1 PEKDVDGLHPVNLGRLALG--RPGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCccccCCCccchhhHhcC--CCCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 6899999999999999865 57899999999999999999999999999999999889999999999999999999999
Q ss_pred CCHhhhccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCccc
Q 017679 267 KNPEQITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVG 346 (368)
Q Consensus 267 ~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVG 346 (368)
.++.+.+++|||||+|||+|++|+.++++++.++||++.++.. |.+ ++|++||+||+.+++++.++||+|||||
T Consensus 79 ~~l~~~l~~aDiVIsat~~~~ii~~~~~~~~~viIDla~prdv---d~~---~~~~~G~~d~~~~~~~~~~~~~~pggvg 152 (168)
T cd01080 79 KNLKEHTKQADIVIVAVGKPGLVKGDMVKPGAVVIDVGINRVP---DKS---GGKLVGDVDFESAKEKASAITPVPGGVG 152 (168)
T ss_pred hhHHHHHhhCCEEEEcCCCCceecHHHccCCeEEEEccCCCcc---ccc---CCCeeCCcCHHHHHhhccCcCCCCCcCh
Confidence 9999999999999999999999999999999999999999975 422 5689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 017679 347 PMTVAMLLSNTLDSAK 362 (368)
Q Consensus 347 p~T~amLl~N~v~a~~ 362 (368)
|+|+++||+|++++++
T Consensus 153 p~t~a~l~~n~~~~~~ 168 (168)
T cd01080 153 PMTVAMLMKNTVEAAK 168 (168)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 40
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=100.00 E-value=8.3e-41 Score=293.19 Aligned_cols=137 Identities=36% Similarity=0.554 Sum_probs=129.7
Q ss_pred CcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCC
Q 017679 207 REPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 207 ~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p 286 (368)
.+++|+||||+|++++|++|+++++||+|+|+|||..+|+|++.+|+++|++|++||++|+++++++++|||||+|+|++
T Consensus 3 ~~~~~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~ 82 (140)
T cd05212 3 CTPLFVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKP 82 (140)
T ss_pred CCCcccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCC
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 287 NLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 287 ~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
++|+++|+|||++|||+|+++. +|+++.++++++|||||||||||++|||+|+++++
T Consensus 83 ~~i~~~~ikpGa~Vidvg~~~~------------------~~~~~~~~a~~~tPvpgGVGp~T~a~L~~n~~~~~ 139 (140)
T cd05212 83 EKVPTEWIKPGATVINCSPTKL------------------SGDDVKESASLYVPMTGGVGKLTVAMRMQNMVRSV 139 (140)
T ss_pred CccCHHHcCCCCEEEEcCCCcc------------------cchhhHhhceEEcCCCCCchHHHHHHHHHHHHHhc
Confidence 9999999999999999998862 14677788999999999999999999999999875
No 41
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=100.00 E-value=1.7e-34 Score=245.97 Aligned_cols=117 Identities=46% Similarity=0.806 Sum_probs=103.4
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHH
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSIGKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNAL 154 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I 154 (368)
++|+||++|++|+++++++++.|+++ |++|+|++|+||+||+|..|+++|.|.|+++||+++.+.||++++++|+++.|
T Consensus 1 ~iL~Gk~va~~i~~~l~~~i~~l~~~-~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i 79 (117)
T PF00763_consen 1 KILDGKPVAKEIKEELKEEIEKLKEK-GITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELI 79 (117)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHHHHC-T---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHH
Confidence 48999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679 155 SNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192 (368)
Q Consensus 155 ~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD 192 (368)
++||+|++|||||||+|||+|+++.+++++|+|+||||
T Consensus 80 ~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVD 117 (117)
T PF00763_consen 80 EKLNEDPSVHGILVQLPLPKHIDERKILEAIDPEKDVD 117 (117)
T ss_dssp HHHHH-TT-SEEEEESSSSTTSHHHHHHHTS-GGGBTT
T ss_pred HHHhCCCCCCEEEEcCCCCCCccHHHHHhccCcccCCC
Confidence 99999999999999999999999999999999999998
No 42
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=99.89 E-value=2.3e-22 Score=194.92 Aligned_cols=224 Identities=17% Similarity=0.154 Sum_probs=170.7
Q ss_pred EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCC
Q 017679 110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVS 186 (368)
Q Consensus 110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~ 186 (368)
-++|+.-+-..-=.+++.+++++|+++.|..|+.+ +++++|.+.++.+.. .++.|++|++|++ ....++++.++
T Consensus 9 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K--~~v~~~~D~~~ 85 (284)
T PRK12549 9 GLIGAGIQASLSPAMHEAEGDAQGLRYVYRLIDLDALGLTADALPELLDAAER-MGFAGLNITHPCK--QAVIPHLDELS 85 (284)
T ss_pred EEECCCcccccCHHHHHHHHHHcCCCeEEEEEeeccccCCHHHHHHHHHHHHh-cCCCEEEECcCCH--HHHHHHhccCC
Confidence 35676444344446899999999999999999643 347789999998875 4899999999998 44455666777
Q ss_pred c-ccccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEE
Q 017679 187 L-EKDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 262 (368)
Q Consensus 187 p-~KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~ 262 (368)
+ .+.+.+++.+ + -|++. |+ +++..|+++.|++...++++|+|+|||+|++ |++++..|...|+ +|+++
T Consensus 86 ~~A~~iGAvNTv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~k~vlIlGaGGa-araia~aL~~~G~~~I~I~ 157 (284)
T PRK12549 86 DDARALGAVNTVVFRDGRRI-GH------NTDWSGFAESFRRGLPDASLERVVQLGAGGA-GAAVAHALLTLGVERLTIF 157 (284)
T ss_pred HHHHHhCCceEEEecCCEEE-EE------cCCHHHHHHHHHhhccCccCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEE
Confidence 7 6666665322 2 23443 54 4555999999998777899999999999997 9999999999997 89999
Q ss_pred eCCCC----------------------CHhhhccCCCEEEEecCC-----CC-cccCCCcCCCcEEEEeecCCCCCCCCC
Q 017679 263 HALTK----------------------NPEQITSEADIVIAAAGV-----AN-LVRGSWLKPGAVVLDVGTCPVDVSVDP 314 (368)
Q Consensus 263 h~~t~----------------------~L~~~~~~ADIVIsAvG~-----p~-~I~~e~ik~gavVIDvg~n~~~~~~d~ 314 (368)
+|+.. ++.+.++++|+||++|+. +. .++.++++++.+|+|+.|+|.+
T Consensus 158 nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~----- 232 (284)
T PRK12549 158 DVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLE----- 232 (284)
T ss_pred CCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCC-----
Confidence 98631 223356789999999742 22 3667889999999999999865
Q ss_pred CCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 315 SCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 315 t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++|+ ..+ +..|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 233 -----T~ll-----~~A-~~~G~--~~~~G~~-----ML~~Qa~~~f~~wtg~ 267 (284)
T PRK12549 233 -----TELL-----RAA-RALGC--RTLDGGG-----MAVFQAVDAFELFTGR 267 (284)
T ss_pred -----CHHH-----HHH-HHCCC--eEecCHH-----HHHHHHHHHHHHhcCC
Confidence 3565 555 55676 5566676 9999999999999985
No 43
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=99.88 E-value=5.4e-22 Score=191.21 Aligned_cols=221 Identities=18% Similarity=0.255 Sum_probs=169.5
Q ss_pred EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679 111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 189 (368)
Q Consensus 111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K 189 (368)
++|+.-+-..-=.+++.+++++|+++.|..|. +.+++|.+.++.+... ++.|++|++|++ .+..++++.++| .+
T Consensus 10 viG~pi~hS~SP~~hn~~~~~~gl~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~~d~~~~~A~ 84 (278)
T PRK00258 10 VIGNPIAHSKSPLIHNAAFKQLGLDGVYLAIL--VPPEDLEDAVKGFFAL-GGRGANVTVPFK--EAAFALADELSERAR 84 (278)
T ss_pred EECCchhcccCHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhC-CCCEEEECcCCH--HHHHHHhhcCCHHHH
Confidence 36743322233358899999999999999984 4678899999999875 799999999998 455667777777 67
Q ss_pred ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHH-hCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCC
Q 017679 190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL 265 (368)
Q Consensus 190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~-~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~ 265 (368)
.+..++.+ + -|++. |+ +++..|++..|++ .+.++++|+|+|+|+|++ |+.++..|...| ++|++++|+
T Consensus 85 ~igavNtv~~~~g~l~-G~------NTD~~G~~~~l~~~~~~~~~~k~vlVlGaGg~-a~ai~~aL~~~g~~~V~v~~R~ 156 (278)
T PRK00258 85 LIGAVNTLVLEDGRLI-GD------NTDGIGFVRALEERLGVDLKGKRILILGAGGA-ARAVILPLLDLGVAEITIVNRT 156 (278)
T ss_pred HhCCceEEEeeCCEEE-EE------cccHHHHHHHHHhccCCCCCCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEEeCC
Confidence 76665333 3 23332 54 5556999999986 578899999999999987 999999999999 699999986
Q ss_pred CCC-------------------HhhhccCCCEEEEecCCCC-------cccCCCcCCCcEEEEeecCCCCCCCCCCCCCC
Q 017679 266 TKN-------------------PEQITSEADIVIAAAGVAN-------LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYG 319 (368)
Q Consensus 266 t~~-------------------L~~~~~~ADIVIsAvG~p~-------~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~ 319 (368)
... +.+.+.++|+||++|+... .+..++++++.+|+|+.|+|.+
T Consensus 157 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~---------- 226 (278)
T PRK00258 157 VERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLP---------- 226 (278)
T ss_pred HHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCC----------
Confidence 421 1234477999999997432 2455788999999999999864
Q ss_pred cEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 320 YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 320 ~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+.|. +.| ++.|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 227 T~ll-----~~A-~~~G~--~~~~G~~-----Ml~~Qa~~~f~~wtg~ 261 (278)
T PRK00258 227 TPFL-----AWA-KAQGA--RTIDGLG-----MLVHQAAEAFELWTGV 261 (278)
T ss_pred CHHH-----HHH-HHCcC--eecCCHH-----HHHHHHHHHHHHHcCC
Confidence 2455 555 66776 6667777 9999999999999985
No 44
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=99.88 E-value=6.2e-22 Score=192.10 Aligned_cols=222 Identities=22% Similarity=0.267 Sum_probs=168.8
Q ss_pred EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679 110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 188 (368)
Q Consensus 110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~ 188 (368)
-++|+.-+...-=.+++.+++++|+++.|..|+ +.+++|.+.++.+.. .++.|++|++|++ ....++++.++| .
T Consensus 13 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~~~~-~~~~G~nVT~P~K--~~v~~~ld~~~~~A 87 (289)
T PRK12548 13 GLIGSPVGHSGSPAMYNYSFQKAGLDYAYLAFD--IPVDKVPDAIKAIKT-FNMRGANVTMPCK--SEAAKYMDELSPAA 87 (289)
T ss_pred EEEcCCcccccCHHHHHHHHHHcCCCEEEEEEe--cCHHHHHHHHHHHHH-CCCCEEEECccCH--HHHHHHhhcCCHHH
Confidence 346764333333358999999999999999995 467889999999876 4799999999998 445666777777 5
Q ss_pred cccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCC
Q 017679 189 KDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHAL 265 (368)
Q Consensus 189 KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~ 265 (368)
+-+.+++.+ + -|++. |++ ++..|+++.|++++.+++||+++|+|+|++ |++++..|...|++ |++++|+
T Consensus 88 ~~iGavNTi~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlI~GAGGa-grAia~~La~~G~~~V~I~~R~ 159 (289)
T PRK12548 88 RIIGAVNTIVNDDGKLT-GHI------TDGLGFVRNLREHGVDVKGKKLTVIGAGGA-ATAIQVQCALDGAKEITIFNIK 159 (289)
T ss_pred HHhCceeEEEeECCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCC
Confidence 665555322 2 24443 544 455999999999988999999999999997 99999999999985 9999986
Q ss_pred C---CC---------------------------HhhhccCCCEEEEecC---CCC----cc-cCCCcCCCcEEEEeecCC
Q 017679 266 T---KN---------------------------PEQITSEADIVIAAAG---VAN----LV-RGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 266 t---~~---------------------------L~~~~~~ADIVIsAvG---~p~----~I-~~e~ik~gavVIDvg~n~ 307 (368)
. .. +.+.+..+|+||++|+ .|+ .+ ..+++.++.+|+|+.|+|
T Consensus 160 ~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P 239 (289)
T PRK12548 160 DDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP 239 (289)
T ss_pred chHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence 3 10 1123356899998885 232 24 456789999999999999
Q ss_pred CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
.+ ++|+ ..+ +..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 240 ~~----------T~ll-----~~A-~~~G~--~~~~G~~-----ML~~Qa~~~f~lwtg~ 276 (289)
T PRK12548 240 KK----------TKLL-----EDA-EAAGC--KTVGGLG-----MLLWQGAEAYKLYTGK 276 (289)
T ss_pred CC----------CHHH-----HHH-HHCCC--eeeCcHH-----HHHHHHHHHHHHhcCC
Confidence 75 3566 555 55676 6667777 9999999999999985
No 45
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=99.87 E-value=8.5e-22 Score=191.48 Aligned_cols=221 Identities=21% Similarity=0.214 Sum_probs=166.9
Q ss_pred EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679 111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 189 (368)
Q Consensus 111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K 189 (368)
++|+.-+-..-=.+++.+++++|+++.|..++ +.+++|.+.++.+... ++.|++|++|++ ....++++.+++ .+
T Consensus 12 liG~Pi~hSlSP~ihn~~f~~~gl~~~Y~~~~--v~~~~l~~~~~~l~~~-~~~G~nVTiP~K--~~~~~~~D~l~~~A~ 86 (288)
T PRK12749 12 LMAYPIRHSLSPEMQNKALEKAGLPFTYMAFE--VDNDSFPGAIEGLKAL-KMRGTGVSMPNK--QLACEYVDELTPAAK 86 (288)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCeEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH--HHHHHHhccCCHHHH
Confidence 46754333333468999999999999999985 4778899999998764 799999999998 444566677777 66
Q ss_pred ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679 190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 266 (368)
Q Consensus 190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t 266 (368)
.+.+++.+ + -|++. |+ +++..|+++.|++.+++++||+++|+|+|++ +|+++..|...|+ +|+|++|+.
T Consensus 87 ~iGAVNTv~~~~g~l~-G~------NTD~~Gf~~~l~~~~~~~~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 87 LVGAINTIVNDDGYLR-GY------NTDGTGHIRAIKESGFDIKGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred HhCceeEEEccCCEEE-EE------ecCHHHHHHHHHhcCCCcCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCc
Confidence 66655322 1 34443 54 5555999999999999999999999999998 9999999999996 899999973
Q ss_pred C------C-----------------H------hhhccCCCEEEEecCC---CC----c-ccCCCcCCCcEEEEeecCCCC
Q 017679 267 K------N-----------------P------EQITSEADIVIAAAGV---AN----L-VRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 267 ~------~-----------------L------~~~~~~ADIVIsAvG~---p~----~-I~~e~ik~gavVIDvg~n~~~ 309 (368)
. + + .+.+.++|+||++|+. |+ + +..+.++++.+|+|+.|+|.+
T Consensus 159 ~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~ 238 (288)
T PRK12749 159 EFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM 238 (288)
T ss_pred cHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCcc
Confidence 1 0 1 1134578999998863 32 1 234567889999999999875
Q ss_pred CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++|+ ..+ +..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 239 ----------T~ll-----~~A-~~~G~--~~~~Gl~-----ML~~Qa~~~f~lwtg~ 273 (288)
T PRK12749 239 ----------TKLL-----QQA-QQAGC--KTIDGYG-----MLLWQGAEQFTLWTGK 273 (288)
T ss_pred ----------CHHH-----HHH-HHCCC--eEECCHH-----HHHHHHHHHHHHhcCC
Confidence 3566 555 55676 4556666 9999999999999985
No 46
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=99.87 E-value=8.4e-22 Score=191.05 Aligned_cols=219 Identities=22% Similarity=0.320 Sum_probs=168.3
Q ss_pred eCC-CcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679 112 VGE-RRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 189 (368)
Q Consensus 112 vG~-d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K 189 (368)
+|+ -+-|.+ -.+++.+++++|+++.|..+.. ..++|.+.|+.+. +..+.|++|++|++ ....++++.+++ .+
T Consensus 12 iG~Pi~HS~S-P~~Hn~~~~~lGl~~~Y~a~~v--~~~~l~~~v~~~~-~~g~~G~NVTiP~K--e~~~~~lD~l~~~A~ 85 (283)
T COG0169 12 IGNPISHSLS-PRMHNAAFRALGLDYVYLAFEV--PPEDLPEAVSGIR-ALGFRGLNVTIPFK--EAALPLLDELSPRAR 85 (283)
T ss_pred EcCCcccCcC-HHHHHHHHHHcCCCceEEEeec--CHHHHHHHHHHHH-hcCCCeeEECCccH--HHHHHHHhcCCHHHH
Confidence 455 333433 3689999999999999999955 6889999999998 57899999999998 445667777777 56
Q ss_pred ccCcc-Cccee--eeccccCCcCccccCCHHHHHHHHHHhC--CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEe
Q 017679 190 DVDGF-HPLNI--GNLAMRGREPLFIPCTPKGCIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 263 (368)
Q Consensus 190 DVDgl-~~~N~--G~L~~g~~~~~~~PcTa~gv~~lL~~~~--i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h 263 (368)
-+..+ |.++. |++. |+++++ .|+.+.|++++ .+.+|++|+|+|+||+ +|+++..|++.|+ +|+|++
T Consensus 86 ~iGAVNTl~~~~~g~l~-G~NTD~------~G~~~~L~~~~~~~~~~~~~vlilGAGGA-arAv~~aL~~~g~~~i~V~N 157 (283)
T COG0169 86 LIGAVNTLVREDDGKLR-GYNTDG------IGFLRALKEFGLPVDVTGKRVLILGAGGA-ARAVAFALAEAGAKRITVVN 157 (283)
T ss_pred HhCCceEEEEccCCEEE-EEcCCH------HHHHHHHHhcCCCcccCCCEEEEECCcHH-HHHHHHHHHHcCCCEEEEEe
Confidence 65555 33333 4554 655554 99999999987 5677999999999999 9999999999995 899999
Q ss_pred CCCCC---H----------------h--hhccCCCEEEEecCC---CC----cccCCCcCCCcEEEEeecCCCCCCCCCC
Q 017679 264 ALTKN---P----------------E--QITSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVDVSVDPS 315 (368)
Q Consensus 264 ~~t~~---L----------------~--~~~~~ADIVIsAvG~---p~----~I~~e~ik~gavVIDvg~n~~~~~~d~t 315 (368)
|+... | . +...++|+||++|+. ++ ++..+.++++.+|+|+.|+|.+
T Consensus 158 Rt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~------ 231 (283)
T COG0169 158 RTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE------ 231 (283)
T ss_pred CCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCC------
Confidence 97421 1 1 111159999999962 22 3556889999999999999976
Q ss_pred CCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 316 ~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++|+ +.| +..|+. +-.|.| ||++|.+++++.|+|.
T Consensus 232 ----TplL-----~~A-~~~G~~--~idGl~-----Mlv~Qaa~aF~lwtg~ 266 (283)
T COG0169 232 ----TPLL-----REA-RAQGAK--TIDGLG-----MLVHQAAEAFELWTGV 266 (283)
T ss_pred ----CHHH-----HHH-HHcCCe--EECcHH-----HHHHHHHHHHHHHhCC
Confidence 3666 666 445654 345666 9999999999999986
No 47
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=99.87 E-value=1.3e-21 Score=188.84 Aligned_cols=225 Identities=17% Similarity=0.180 Sum_probs=170.8
Q ss_pred CCCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHH
Q 017679 102 GKVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKI 181 (368)
Q Consensus 102 g~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~i 181 (368)
+..++|..=++|+. -|.+-. +++.+++++|+++.|..|+ .++|.+.++.+.. .++.|++|++|++ ....++
T Consensus 6 ~~~~~~~~gliG~P-~~~Sp~-ihn~~f~~~gl~~~Y~~~~----~~~l~~~~~~l~~-~~~~G~nVT~P~K--~~~~~~ 76 (272)
T PRK12550 6 NKDTQLCISLAARP-SNFGTR-FHNYLYEALGLNFLYKAFT----TTDLTAAIGGVRA-LGIRGCAVSMPFK--EAVIPL 76 (272)
T ss_pred CCCceEEEEEEccc-hhcCHH-HHHHHHHHcCCCcEEEecC----HhHHHHHHHHHHh-cCCCEEEECcCCH--HHHHHH
Confidence 45567655567854 667765 9999999999999999995 3678888888876 3799999999998 444667
Q ss_pred HhcCCc-ccccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-
Q 017679 182 LDAVSL-EKDVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA- 257 (368)
Q Consensus 182 l~~I~p-~KDVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA- 257 (368)
++.++| .+.+.+++.+ + -|++. |+ +++..|+++.|++++.+ .+|+|+|+|+|++ +|+++..|.+.|+
T Consensus 77 lD~l~~~A~~iGAVNTi~~~~g~l~-G~------NTD~~Gf~~~L~~~~~~-~~~~vlilGaGGa-arAi~~aL~~~g~~ 147 (272)
T PRK12550 77 VDELDPSAQAIESVNTIVNTDGHLK-AY------NTDYIAIAKLLASYQVP-PDLVVALRGSGGM-AKAVAAALRDAGFT 147 (272)
T ss_pred hhcCCHHHHHhCCeeEEEeeCCEEE-EE------ecCHHHHHHHHHhcCCC-CCCeEEEECCcHH-HHHHHHHHHHCCCC
Confidence 777777 6666655322 2 23332 44 55559999999988875 4789999999998 9999999999997
Q ss_pred EEEEEeCCCCC---Hh--------hh--ccCCCEEEEecCC---CC------cccCCCcCCCcEEEEeecCCCCCCCCCC
Q 017679 258 TVSIVHALTKN---PE--------QI--TSEADIVIAAAGV---AN------LVRGSWLKPGAVVLDVGTCPVDVSVDPS 315 (368)
Q Consensus 258 tVti~h~~t~~---L~--------~~--~~~ADIVIsAvG~---p~------~I~~e~ik~gavVIDvg~n~~~~~~d~t 315 (368)
+|+|++|+... +. +. ...+|+||+||+. ++ .++.++++++.+|+|+.|+|.+
T Consensus 148 ~i~i~nR~~~~a~~la~~~~~~~~~~~~~~~~dlvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~------ 221 (272)
T PRK12550 148 DGTIVARNEKTGKALAELYGYEWRPDLGGIEADILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAE------ 221 (272)
T ss_pred EEEEEeCCHHHHHHHHHHhCCcchhhcccccCCEEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCcc------
Confidence 69999997421 11 11 1458999999862 21 2667789999999999999865
Q ss_pred CCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 316 CEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 316 ~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++|. ..+ +..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 222 ----T~ll-----~~A-~~~G~--~~i~Gl~-----MLi~Qa~~~f~lwtg~ 256 (272)
T PRK12550 222 ----TPLI-----RYA-RARGK--TVITGAE-----VIALQAVEQFVLYTGV 256 (272)
T ss_pred ----CHHH-----HHH-HHCcC--eEeCCHH-----HHHHHHHHHHHHHhCC
Confidence 3566 555 55676 5566777 9999999999999985
No 48
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=99.87 E-value=1.8e-21 Score=188.34 Aligned_cols=223 Identities=16% Similarity=0.191 Sum_probs=165.6
Q ss_pred EEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-
Q 017679 109 VILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL- 187 (368)
Q Consensus 109 iI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p- 187 (368)
.-++|+.-+...-=.+++.+++++|+++.|..++.. +.++|.+.++.+.. ++.|++|++|++ ....++++.+++
T Consensus 8 ~~liG~Pi~hS~SP~ihn~~f~~~gl~~~y~~~~~~-~~~~l~~~~~~~~~--~~~G~nVT~P~K--~~~~~~~d~~~~~ 82 (282)
T TIGR01809 8 AFIIGKPIAHSRSPHLHNAGYEILGLPDKTYEFETC-SAEELKEVLSGFGP--QFGGASVTIPLK--FAILRFADEHTDR 82 (282)
T ss_pred EEEEcCCchhccCHHHHHHHHHHcCCCcEEEeeecC-CHHHHHHHHHhcCC--CCcEEEECCCCH--HHHHHHhhcCCHH
Confidence 345775433333346899999999999999999642 35789999998843 799999999998 445566777777
Q ss_pred ccccCccCcc-e--eeeccccCCcCccccCCHHHHHHHHHHhCC--CCccceEEEEccCccchHHHHHHHhhCCC-EEEE
Q 017679 188 EKDVDGFHPL-N--IGNLAMRGREPLFIPCTPKGCIELLIRSGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSI 261 (368)
Q Consensus 188 ~KDVDgl~~~-N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i--~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti 261 (368)
.|-+.+++.+ + -|++. |++ ++..|+++.|++.+. +++||+|+|||+|++ ||+++..|...|+ +|+|
T Consensus 83 A~~iGAVNTv~~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~~~k~vlvlGaGGa-arai~~aL~~~G~~~i~I 154 (282)
T TIGR01809 83 ASLIGSVNTLLRTQNGIWK-GDN------TDWDGIAGALANIGKFEPLAGFRGLVIGAGGT-SRAAVYALASLGVTDITV 154 (282)
T ss_pred HHHhCceeEEEEcCCCcEE-Eec------CCHHHHHHHHHhhCCccccCCceEEEEcCcHH-HHHHHHHHHHcCCCeEEE
Confidence 6666655332 2 13343 544 455999999998874 689999999999998 9999999999997 7999
Q ss_pred EeCCCC----------------------CHhhhccCCCEEEEecCCCCcccCCC------------cCCCcEEEEeecCC
Q 017679 262 VHALTK----------------------NPEQITSEADIVIAAAGVANLVRGSW------------LKPGAVVLDVGTCP 307 (368)
Q Consensus 262 ~h~~t~----------------------~L~~~~~~ADIVIsAvG~p~~I~~e~------------ik~gavVIDvg~n~ 307 (368)
++|+.. ++.+.+.++|+||++|+....++.+. +.++.+|+|+.|+|
T Consensus 155 ~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P 234 (282)
T TIGR01809 155 INRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDP 234 (282)
T ss_pred EeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCC
Confidence 998631 11233577899999998654443322 34678999999998
Q ss_pred CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
.+ +.|+ ..+ +.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 235 ~~----------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 271 (282)
T TIGR01809 235 WP----------TPLV-----AIV-SAAGW--RVISGLQ-----MLLHQGFAQFEQWTGM 271 (282)
T ss_pred CC----------CHHH-----HHH-HHCCC--EEECcHH-----HHHHHHHHHHHHHHCC
Confidence 65 2455 444 55776 5556776 9999999999999985
No 49
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=99.86 E-value=2e-21 Score=188.52 Aligned_cols=223 Identities=17% Similarity=0.174 Sum_probs=169.5
Q ss_pred EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC---CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc
Q 017679 111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG---CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL 187 (368)
Q Consensus 111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~---~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p 187 (368)
++|+.-+....=.+++.+++++|+++.|..|+.. +++++|.+.++.+... ++.|++|++|++ ....++++.+++
T Consensus 9 liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v~~~~~~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~lD~l~~ 85 (283)
T PRK14027 9 LIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYL-GFNGLNITHPYK--QAVLPLLDEVSE 85 (283)
T ss_pred EECCCccccCCHHHHHHHHHHcCCCeEEEEEecccccCCHHHHHHHHHHHHhc-CCCEEEECccCH--HHHHHHhhhCCH
Confidence 3565433333346899999999999999999643 3467888999988764 899999999998 455667777877
Q ss_pred -ccccCccCcc-e--eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEE
Q 017679 188 -EKDVDGFHPL-N--IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIV 262 (368)
Q Consensus 188 -~KDVDgl~~~-N--~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~ 262 (368)
.+.+..++.+ + -|++. |+++++ .|+++.|++.+.+++||+|+|+|+||+ ||+++..|...|+ +|+|+
T Consensus 86 ~A~~iGAVNTv~~~~~g~l~-G~NTD~------~Gf~~~L~~~~~~~~~k~vlilGaGGa-arAi~~aL~~~g~~~i~i~ 157 (283)
T PRK14027 86 QATQLGAVNTVVIDATGHTT-GHNTDV------SGFGRGMEEGLPNAKLDSVVQVGAGGV-GNAVAYALVTHGVQKLQVA 157 (283)
T ss_pred HHHHhCCceEEEECCCCcEE-EEcCCH------HHHHHHHHhcCcCcCCCeEEEECCcHH-HHHHHHHHHHCCCCEEEEE
Confidence 7777666433 2 34443 655555 999999998767789999999999998 9999999999996 89999
Q ss_pred eCCCC---CH---------------------hhhccCCCEEEEecCC---CC---cccCCCcCCCcEEEEeecCCCCCCC
Q 017679 263 HALTK---NP---------------------EQITSEADIVIAAAGV---AN---LVRGSWLKPGAVVLDVGTCPVDVSV 312 (368)
Q Consensus 263 h~~t~---~L---------------------~~~~~~ADIVIsAvG~---p~---~I~~e~ik~gavVIDvg~n~~~~~~ 312 (368)
+|+.. .| .+.+.++|+||++|+. ++ .++.+.+.++.+|+|+.|+|.+
T Consensus 158 nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~--- 234 (283)
T PRK14027 158 DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIE--- 234 (283)
T ss_pred cCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCC---
Confidence 98631 11 1234578999988862 21 2555678889999999999965
Q ss_pred CCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 313 DPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 313 d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
++|+ ..+ +..|+ ++-+|.+ ||++|.+++++.|+|.
T Consensus 235 -------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lw~G~ 269 (283)
T PRK14027 235 -------TELL-----KAA-RALGC--ETLDGTR-----MAIHQAVDAFRLFTGL 269 (283)
T ss_pred -------CHHH-----HHH-HHCCC--EEEccHH-----HHHHHHHHHHHHHhCC
Confidence 3566 555 55676 5556777 9999999999999985
No 50
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=99.86 E-value=5.6e-21 Score=183.19 Aligned_cols=220 Identities=20% Similarity=0.220 Sum_probs=165.7
Q ss_pred eCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccc
Q 017679 112 VGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKD 190 (368)
Q Consensus 112 vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KD 190 (368)
+|+.-+-..-=.+++.+++++|+++.|..|+ +.+++|.+.++.+... ++.|++|++|++ .+..++++.+++ .+-
T Consensus 6 iG~pi~hS~SP~~hn~~~~~~g~~~~y~~~~--v~~~~l~~~~~~~~~~-~~~G~nVT~P~K--~~~~~~~d~~~~~A~~ 80 (270)
T TIGR00507 6 IGNPIAHSKSPLIHNAFFKQLGLEGPYIAFL--VPPDDLEDALSGFFAL-GFKGANVTSPFK--EEAFQFLDEIDERAKL 80 (270)
T ss_pred ECCccccccCHHHHHHHHHHcCCCcEEEEEe--cCHHHHHHHHHHHHhc-CCCEEEECcCCH--HHHHHHhhhCCHHHHH
Confidence 4543332333368999999999999999985 4677899999999764 799999999998 445667777777 666
Q ss_pred cCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC
Q 017679 191 VDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN 268 (368)
Q Consensus 191 VDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~ 268 (368)
+.+++.+ + -|++. |+ +++..|+++.|++.+...++|+++|+|+|++ |++++..|.+.|+.|++++|+...
T Consensus 81 ~gavNti~~~~g~l~-g~------NTD~~G~~~~l~~~~~~~~~k~vliiGaGg~-g~aia~~L~~~g~~v~v~~R~~~~ 152 (270)
T TIGR00507 81 AGAVNTLKLEDGKLV-GY------NTDGIGLVSDLERLIPLRPNQRVLIIGAGGA-ARAVALPLLKADCNVIIANRTVSK 152 (270)
T ss_pred hCCceEEEeeCCEEE-EE------cCCHHHHHHHHHhcCCCccCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHHH
Confidence 6665333 2 23333 44 5566999999998777788999999999976 999999999999999999886321
Q ss_pred H------------------hh-hccCCCEEEEecCCC---C----cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEE
Q 017679 269 P------------------EQ-ITSEADIVIAAAGVA---N----LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRL 322 (368)
Q Consensus 269 L------------------~~-~~~~ADIVIsAvG~p---~----~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl 322 (368)
. .+ ...++|+||++++.. . .+..++++++.+|+|+.|+|.+ +.|
T Consensus 153 ~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~----------T~l 222 (270)
T TIGR00507 153 AEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGE----------TPF 222 (270)
T ss_pred HHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCC----------CHH
Confidence 1 11 225789999999852 2 2345678999999999999865 234
Q ss_pred EcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 323 MGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 323 ~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
. +.+ +..|+ ++-.|.+ ||++|.+.+++.|+|.
T Consensus 223 l-----~~A-~~~G~--~~vdG~~-----Ml~~Qa~~~f~~w~g~ 254 (270)
T TIGR00507 223 L-----AEA-KSLGT--KTIDGLG-----MLVAQAALAFELWTGV 254 (270)
T ss_pred H-----HHH-HHCCC--eeeCCHH-----HHHHHHHHHHHHHcCC
Confidence 3 444 55675 5556676 9999999999999985
No 51
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=99.80 E-value=5.5e-19 Score=184.63 Aligned_cols=220 Identities=21% Similarity=0.267 Sum_probs=165.2
Q ss_pred EEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-c
Q 017679 110 ILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-E 188 (368)
Q Consensus 110 I~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~ 188 (368)
-++|+.-+-..-=.+++.+++++|+++.|..|+. ++|.+.++.++. .++.|++|++|++ ....++++.++| .
T Consensus 256 ~liG~Pi~hS~SP~ihn~~f~~~gl~~~Y~~~~v----~~l~~~~~~l~~-~~~~G~nVTiP~K--~~v~~~lD~~~~~A 328 (529)
T PLN02520 256 GIIGKPVGHSKSPILHNEAFKSVGFNGVYVHLLV----DDLAKFLQTYSS-PDFAGFSCTIPHK--EDALKCCDEVDPIA 328 (529)
T ss_pred EEEcCCcccccCHHHHHHHHHHCCCCcEEEEeeh----hhHHHHHHHHhh-CCCCEEEECcCCH--HHHHHHhccCCHHH
Confidence 3678643333333689999999999999999964 467777777765 5799999999998 445667777877 7
Q ss_pred cccCccCcc-e---eeeccccCCcCccccCCHHHHHHHHHHh----------CCCCccceEEEEccCccchHHHHHHHhh
Q 017679 189 KDVDGFHPL-N---IGNLAMRGREPLFIPCTPKGCIELLIRS----------GVEIMGKNAVVIGRSNIVGLPTSLLLQR 254 (368)
Q Consensus 189 KDVDgl~~~-N---~G~L~~g~~~~~~~PcTa~gv~~lL~~~----------~i~l~GK~VvVIG~g~~VGrpla~lL~~ 254 (368)
+.+.+++.+ + -|++. |+++ +..|+++.|++. +.+++||+|+|+|+|++ |++++..|.+
T Consensus 329 ~~iGAVNTvv~~~~~g~l~-G~NT------D~~G~~~~l~~~~~~~~~~~~~~~~~~~k~vlIlGaGGa-grAia~~L~~ 400 (529)
T PLN02520 329 KSIGAINTIIRRPSDGKLV-GYNT------DYIGAISAIEDGLRASGSSPASGSPLAGKLFVVIGAGGA-GKALAYGAKE 400 (529)
T ss_pred HHhCCceEEEEeCCCCEEE-EEcc------cHHHHHHHHHhhhcccccccccccCCCCCEEEEECCcHH-HHHHHHHHHH
Confidence 777776433 3 24543 5544 459999999752 56789999999999987 9999999999
Q ss_pred CCCEEEEEeCCCCC---H--------------hhh-ccCCCEEEEecCC---CC----cccCCCcCCCcEEEEeecCCCC
Q 017679 255 HHATVSIVHALTKN---P--------------EQI-TSEADIVIAAAGV---AN----LVRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 255 ~gAtVti~h~~t~~---L--------------~~~-~~~ADIVIsAvG~---p~----~I~~e~ik~gavVIDvg~n~~~ 309 (368)
+|++|++++|+... + .+. ...+|+||++++. |+ .++.++++++.+|+|+.|+|.+
T Consensus 401 ~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~ 480 (529)
T PLN02520 401 KGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKI 480 (529)
T ss_pred CCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCc
Confidence 99999999886321 1 111 1357899987752 32 2566788999999999999975
Q ss_pred CCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 310 VSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 310 ~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+.|+ ..| +.+|+ ++-+|.+ ||++|.+.+++.|+|.
T Consensus 481 ----------T~ll-----~~A-~~~G~--~~~~Gl~-----MLv~Qa~~~f~lwtg~ 515 (529)
T PLN02520 481 ----------TRLL-----REA-EESGA--IIVSGTE-----MFIRQAYEQFERFTGL 515 (529)
T ss_pred ----------CHHH-----HHH-HHCCC--eEeCcHH-----HHHHHHHHHHHHHhCC
Confidence 3566 555 55776 5556666 9999999999999985
No 52
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=99.78 E-value=1e-18 Score=180.55 Aligned_cols=218 Identities=17% Similarity=0.183 Sum_probs=163.5
Q ss_pred EeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-cc
Q 017679 111 LVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EK 189 (368)
Q Consensus 111 ~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~K 189 (368)
++|+.-+-..-=.+++.+++++|+++.|..|+. .+++|.+.++.+.. .++.|++|++|++ .....+++.+++ .+
T Consensus 220 liG~pi~hS~SP~~hn~~f~~~gl~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~nVT~P~K--~~v~~~~d~~~~~A~ 294 (477)
T PRK09310 220 LIGDPVDRSISHLSHNPLFSQLSLNCPYIKLPL--TPQELPKFFSTIRD-LPFLGLSVTMPLK--TAVLDFLDKLDPSVK 294 (477)
T ss_pred EECCCcccccCHHHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHHh-CCCCEEEECccCH--HHHHHHhccCCHHHH
Confidence 578654333334589999999999999999954 66788888888866 4799999999998 455667777777 67
Q ss_pred ccCccCcc-e-eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679 190 DVDGFHPL-N-IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 267 (368)
Q Consensus 190 DVDgl~~~-N-~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~ 267 (368)
-+.+++.+ + -|++. |++ ++..|+++.|++.+.+++||+++|+|+|++ |++++..|.+.|++|++++++..
T Consensus 295 ~iGAVNTv~~~~g~l~-G~N------TD~~G~~~~l~~~~~~~~~k~vlIiGaGgi-G~aia~~L~~~G~~V~i~~R~~~ 366 (477)
T PRK09310 295 LCGSCNTLVFRNGKIE-GYN------TDGEGLFSLLKQKNIPLNNQHVAIVGAGGA-AKAIATTLARAGAELLIFNRTKA 366 (477)
T ss_pred HhCcceEEEeeCCEEE-EEe------cCHHHHHHHHHhcCCCcCCCEEEEEcCcHH-HHHHHHHHHHCCCEEEEEeCCHH
Confidence 76666433 2 34443 554 455999999999999999999999999986 99999999999999999987632
Q ss_pred CHh--------------h--hccCCCEEEEecCCCCcccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhh
Q 017679 268 NPE--------------Q--ITSEADIVIAAAGVANLVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEA 331 (368)
Q Consensus 268 ~L~--------------~--~~~~ADIVIsAvG~p~~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~ 331 (368)
..+ + .+.++|+||++++....+.. .+. .+|+|+.|+|.+ +.|. ..+
T Consensus 367 ~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~~~~~-~l~--~~v~D~~Y~P~~----------T~ll-----~~A 428 (477)
T PRK09310 367 HAEALASRCQGKAFPLESLPELHRIDIIINCLPPSVTIPK-AFP--PCVVDINTLPKH----------SPYT-----QYA 428 (477)
T ss_pred HHHHHHHHhccceechhHhcccCCCCEEEEcCCCCCcchh-HHh--hhEEeccCCCCC----------CHHH-----HHH
Confidence 111 1 14678999999975433432 333 389999999865 2344 444
Q ss_pred hccceEeccCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 017679 332 MRLASVITPVPGGVGPMTVAMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 332 ~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~~~~~~ 367 (368)
+..|+ ++-+|.+ ||+.|.+.+++.|+|.
T Consensus 429 -~~~G~--~~~~G~~-----Ml~~Qa~~~f~lw~g~ 456 (477)
T PRK09310 429 -RSQGS--SIIYGYE-----MFAEQALLQFRLWFPT 456 (477)
T ss_pred -HHCcC--EEECcHH-----HHHHHHHHHHHHHcCC
Confidence 55676 4556676 9999999999999985
No 53
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.59 E-value=5.2e-15 Score=144.42 Aligned_cols=130 Identities=22% Similarity=0.362 Sum_probs=105.7
Q ss_pred CHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------CHhhhccCCC
Q 017679 215 TPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEAD 277 (368)
Q Consensus 215 Ta~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------~L~~~~~~AD 277 (368)
|+.+ +.+.++++++++.|++|+|||.|.+ |++++..|.+.|++|++++++.. ++.+.++++|
T Consensus 134 ~aegav~~a~~~~~~~l~g~kvlViG~G~i-G~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aD 212 (296)
T PRK08306 134 TAEGAIMMAIEHTPITIHGSNVLVLGFGRT-GMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKID 212 (296)
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCC
Confidence 4444 5566788889999999999999985 99999999999999999998742 4567789999
Q ss_pred EEEEecCCCCcccCCC---cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHH
Q 017679 278 IVIAAAGVANLVRGSW---LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVA 351 (368)
Q Consensus 278 IVIsAvG~p~~I~~e~---ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~a 351 (368)
+||++++.+ .++.++ +++|++|||+++++ |++||+.+++. +.+.+++||+|+|+|.+
T Consensus 213 iVI~t~p~~-~i~~~~l~~~~~g~vIIDla~~p----------------ggtd~~~a~~~Gv~~~~~~~lpg~vap~ta~ 275 (296)
T PRK08306 213 IIFNTIPAL-VLTKEVLSKMPPEALIIDLASKP----------------GGTDFEYAEKRGIKALLAPGLPGKVAPKTAG 275 (296)
T ss_pred EEEECCChh-hhhHHHHHcCCCCcEEEEEccCC----------------CCcCeeehhhCCeEEEEECCCCccCCHHHHH
Confidence 999998642 456554 68999999999875 45777666443 55558999999999999
Q ss_pred HHHHHHHHHHH
Q 017679 352 MLLSNTLDSAK 362 (368)
Q Consensus 352 mLl~N~v~a~~ 362 (368)
.++.|.+..+-
T Consensus 276 ~~~~~~i~~~l 286 (296)
T PRK08306 276 QILANVLSQLL 286 (296)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 54
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=99.52 E-value=5.7e-14 Score=136.69 Aligned_cols=130 Identities=25% Similarity=0.381 Sum_probs=101.7
Q ss_pred CCHHHH-HHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------CHhhhccCC
Q 017679 214 CTPKGC-IELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------NPEQITSEA 276 (368)
Q Consensus 214 cTa~gv-~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------~L~~~~~~A 276 (368)
+|+.+. ...++.++++++||+++|+|.|++ |+.++..|...|++|++++|+.. ++.+.++++
T Consensus 132 ~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~i-G~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~a 210 (287)
T TIGR02853 132 PTAEGAIMMAIEHTDFTIHGSNVMVLGFGRT-GMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEI 210 (287)
T ss_pred hHHHHHHHHHHHhcCCCCCCCEEEEEcChHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccC
Confidence 455654 455677788999999999999996 99999999999999999988642 345678999
Q ss_pred CEEEEecCCCCcccCC---CcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc--ceEecc-CCCcccHHHH
Q 017679 277 DIVIAAAGVANLVRGS---WLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL--ASVITP-VPGGVGPMTV 350 (368)
Q Consensus 277 DIVIsAvG~p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~--a~~iTP-VPGGVGp~T~ 350 (368)
|+||++++.+ +++.+ .+++++++||++++| |.+||+.+++. -....| .||.|+|+|.
T Consensus 211 DiVint~P~~-ii~~~~l~~~k~~aliIDlas~P----------------g~tdf~~Ak~~G~~a~~~~glPg~~ap~ta 273 (287)
T TIGR02853 211 DIVINTIPAL-VLTADVLSKLPKHAVIIDLASKP----------------GGTDFEYAKKRGIKALLAPGLPGIVAPKTA 273 (287)
T ss_pred CEEEECCChH-HhCHHHHhcCCCCeEEEEeCcCC----------------CCCCHHHHHHCCCEEEEeCCCCcccCchhH
Confidence 9999998653 34443 478899999999976 55678666442 122235 8999999999
Q ss_pred HHHHHHHHHHH
Q 017679 351 AMLLSNTLDSA 361 (368)
Q Consensus 351 amLl~N~v~a~ 361 (368)
+.++.|++...
T Consensus 274 ~~i~~~~~~~~ 284 (287)
T TIGR02853 274 GKILANVLSEL 284 (287)
T ss_pred HHHHHHHHHHH
Confidence 99999998653
No 55
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=99.16 E-value=2.3e-11 Score=105.57 Aligned_cols=87 Identities=25% Similarity=0.271 Sum_probs=70.5
Q ss_pred HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC--------------------CCHhhhccCCCEEE
Q 017679 222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT--------------------KNPEQITSEADIVI 280 (368)
Q Consensus 222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t--------------------~~L~~~~~~ADIVI 280 (368)
+.++...+++||+++|||+|++ |++++..|..+|++ |++++|+. .++.+.+.++|+||
T Consensus 2 la~~~~~~l~~~~vlviGaGg~-ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI 80 (135)
T PF01488_consen 2 LAKKKFGDLKGKRVLVIGAGGA-ARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVI 80 (135)
T ss_dssp HHCTHHSTGTTSEEEEESSSHH-HHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEE
T ss_pred hhHHhcCCcCCCEEEEECCHHH-HHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEE
Confidence 4445556899999999999998 99999999999985 99999973 24556788999999
Q ss_pred EecCCCCc-ccCCCcCCC----cEEEEeecCCCC
Q 017679 281 AAAGVANL-VRGSWLKPG----AVVLDVGTCPVD 309 (368)
Q Consensus 281 sAvG~p~~-I~~e~ik~g----avVIDvg~n~~~ 309 (368)
+||+.++. ++.+++++. .+|+|+++++.-
T Consensus 81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr~i 114 (135)
T PF01488_consen 81 NATPSGMPIITEEMLKKASKKLRLVIDLAVPRDI 114 (135)
T ss_dssp E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-SB
T ss_pred EecCCCCcccCHHHHHHHHhhhhceeccccCCCC
Confidence 99998875 799999887 499999987653
No 56
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=99.14 E-value=4e-11 Score=121.88 Aligned_cols=155 Identities=19% Similarity=0.267 Sum_probs=120.3
Q ss_pred HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL 210 (368)
Q Consensus 131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~ 210 (368)
..|+++-.+ .|.|++.+++..-.-..=.|.. ...-..-..++|.-.|-|..-|.+|.|....
T Consensus 100 AsGLDSmVl------GE~QILGQVK~Ay~~a~~~g~~------g~~L~~lFqkAi~~gKrvRseT~I~~~~VSi------ 161 (414)
T COG0373 100 ASGLDSLVL------GETQILGQVKDAYAKAQENGTL------GKVLNRLFQKAISVGKRVRSETGIGKGAVSI------ 161 (414)
T ss_pred hccchhhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHhhcccCCCCCccch------
Confidence 468877544 5677777777654332212221 1122234556888899999888888776654
Q ss_pred cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC-----------------CCHhhh
Q 017679 211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT-----------------KNPEQI 272 (368)
Q Consensus 211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t-----------------~~L~~~ 272 (368)
+.+++++.++...+|++|+|+|||+|.+ |..+|..|.++| ..|+|+||+- .++.++
T Consensus 162 -----~saAv~lA~~~~~~L~~~~vlvIGAGem-~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~ 235 (414)
T COG0373 162 -----SSAAVELAKRIFGSLKDKKVLVIGAGEM-GELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEA 235 (414)
T ss_pred -----HHHHHHHHHHHhcccccCeEEEEcccHH-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHh
Confidence 3899999999999999999999999997 999999999999 5899999973 367789
Q ss_pred ccCCCEEEEecCCCCc-ccCCCcCCC------cEEEEeecCCCC
Q 017679 273 TSEADIVIAAAGVANL-VRGSWLKPG------AVVLDVGTCPVD 309 (368)
Q Consensus 273 ~~~ADIVIsAvG~p~~-I~~e~ik~g------avVIDvg~n~~~ 309 (368)
+.+|||||++||.|++ |+.+++... .++||++.+|+-
T Consensus 236 l~~~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdi 279 (414)
T COG0373 236 LAEADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDV 279 (414)
T ss_pred hhhCCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence 9999999999999998 688887543 589999999864
No 57
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=99.08 E-value=3.3e-10 Score=90.93 Aligned_cols=78 Identities=29% Similarity=0.460 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHhC----CCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCCCHhhhccCCCEEEEecCCCCc
Q 017679 214 CTPKGCIELLIRSG----VEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTKNPEQITSEADIVIAAAGVANL 288 (368)
Q Consensus 214 cTa~gv~~lL~~~~----i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~ 288 (368)
||+.++++.|++.. .++++|+++|+|+|.. |++++.+|.+. +.+|+++++ |++|+++|.+++
T Consensus 1 ~t~~~~~~~l~~~~~~~~~~~~~~~v~i~G~G~~-g~~~a~~l~~~~~~~v~v~~r------------di~i~~~~~~~~ 67 (86)
T cd05191 1 ATAAGAVALLKAAGKVTNKSLKGKTVVVLGAGEV-GKGIAKLLADEGGKKVVLCDR------------DILVTATPAGVP 67 (86)
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCCEEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC------------CEEEEcCCCCCC
Confidence 78899888887654 4599999999999775 99999999998 578999977 999999999999
Q ss_pred ccC---CCcCCCcEEEEee
Q 017679 289 VRG---SWLKPGAVVLDVG 304 (368)
Q Consensus 289 I~~---e~ik~gavVIDvg 304 (368)
+.+ .+++++.+|+|+.
T Consensus 68 ~~~~~~~~~~~~~~v~~~a 86 (86)
T cd05191 68 VLEEATAKINEGAVVIDLA 86 (86)
T ss_pred chHHHHHhcCCCCEEEecC
Confidence 866 7889999999973
No 58
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=99.08 E-value=1.2e-09 Score=94.94 Aligned_cols=128 Identities=27% Similarity=0.422 Sum_probs=96.4
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC-------------------CHhhhcc
Q 017679 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-------------------NPEQITS 274 (368)
Q Consensus 215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~-------------------~L~~~~~ 274 (368)
+..|+.+.+++.++++++++++|+|.|++ |+.++..|.+.| ..|++++++.. ++.+.+.
T Consensus 2 d~~g~~~a~~~~~~~~~~~~i~iiG~G~~-g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (155)
T cd01065 2 DGLGFVRALEEAGIELKGKKVLILGAGGA-ARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLA 80 (155)
T ss_pred CHHHHHHHHHhhCCCCCCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccc
Confidence 34899999999999999999999999875 999999999986 68999977531 2334468
Q ss_pred CCCEEEEecCCCCc------ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHH
Q 017679 275 EADIVIAAAGVANL------VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPM 348 (368)
Q Consensus 275 ~ADIVIsAvG~p~~------I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~ 348 (368)
++|+||++++.... +....+++|.+|+|+++.+.. ..+. +.+ +..+. +-++|
T Consensus 81 ~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~----------~~l~-----~~~-~~~g~-~~v~g----- 138 (155)
T cd01065 81 EADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLE----------TPLL-----KEA-RALGA-KTIDG----- 138 (155)
T ss_pred cCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCC----------CHHH-----HHH-HHCCC-ceeCC-----
Confidence 89999999986432 333456899999999987642 1122 333 44454 34555
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 017679 349 TVAMLLSNTLDSAKRAYG 366 (368)
Q Consensus 349 T~amLl~N~v~a~~~~~~ 366 (368)
..||+.|.+++++.|+|
T Consensus 139 -~~~~~~q~~~~~~~~~~ 155 (155)
T cd01065 139 -LEMLVYQAAEAFELWTG 155 (155)
T ss_pred -HHHHHHHHHHHHHHhcC
Confidence 45999999999999986
No 59
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=99.02 E-value=3.5e-10 Score=116.78 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=85.8
Q ss_pred HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCc
Q 017679 222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANL 288 (368)
Q Consensus 222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~ 288 (368)
+++.++..+.||+|+|+|.|.+ |+.+|..|...|++|+++++.. .++.+.++.|||||+++|.+++
T Consensus 244 ~~R~~~~~LaGKtVgVIG~G~I-Gr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~i 322 (476)
T PTZ00075 244 IFRATDVMIAGKTVVVCGYGDV-GKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKDI 322 (476)
T ss_pred HHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCcccc
Confidence 4556688999999999999985 9999999999999999997652 3577889999999999999999
Q ss_pred ccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEe
Q 017679 289 VRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVI 338 (368)
Q Consensus 289 I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~i 338 (368)
|+.+++ |+|+++|++|....+...+. -+..+|+|..++++.+..+
T Consensus 323 I~~e~~~~MKpGAiLINvGr~d~Ei~i~a-----L~~~~~vdv~evep~v~~~ 370 (476)
T PTZ00075 323 ITLEHMRRMKNNAIVGNIGHFDNEIQVAE-----LEAYPGIEIVEIKPQVDRY 370 (476)
T ss_pred cCHHHHhccCCCcEEEEcCCCchHHhHHH-----HHhcCCceeecccCCCCeE
Confidence 987766 99999999998753310000 0234567766665555444
No 60
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=99.01 E-value=7.4e-10 Score=99.68 Aligned_cols=86 Identities=26% Similarity=0.425 Sum_probs=64.7
Q ss_pred HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCcc
Q 017679 223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLV 289 (368)
Q Consensus 223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I 289 (368)
++..+..+.||+++|+|.|.+ |+.+|..|...||.|+|+.... ..+++.+++|||+|++||..+.+
T Consensus 14 ~r~t~~~l~Gk~vvV~GYG~v-G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~adi~vtaTG~~~vi 92 (162)
T PF00670_consen 14 MRATNLMLAGKRVVVIGYGKV-GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDADIFVTATGNKDVI 92 (162)
T ss_dssp HHHH-S--TTSEEEEE--SHH-HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-SEEEE-SSSSSSB
T ss_pred HhcCceeeCCCEEEEeCCCcc-cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCCEEEECCCCcccc
Confidence 346789999999999999985 9999999999999999997652 36788999999999999999988
Q ss_pred cCCC---cCCCcEEEEeecCCCC
Q 017679 290 RGSW---LKPGAVVLDVGTCPVD 309 (368)
Q Consensus 290 ~~e~---ik~gavVIDvg~n~~~ 309 (368)
+.++ +|+|++|.++|....|
T Consensus 93 ~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 93 TGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp -HHHHHHS-TTEEEEESSSSTTS
T ss_pred CHHHHHHhcCCeEEeccCcCcee
Confidence 8765 5899999999987654
No 61
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=99.00 E-value=5.5e-10 Score=114.10 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=114.6
Q ss_pred HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL 210 (368)
Q Consensus 131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~ 210 (368)
..|+++-.+ .|.|++.++++.-+...=.|.. ..+-..-+..++.-.|.|..-|.++.|...
T Consensus 103 asGLdSmVl------GE~QIlgQVK~A~~~A~~~g~~------g~~L~~lf~~A~~~aKrVrteT~I~~~~vS------- 163 (414)
T PRK13940 103 ACGLESMVL------GEPQILGQVKDSYTLSKKNHAI------GKELDRVFQKVFATAKRVRSETRIGHCPVS------- 163 (414)
T ss_pred Hhccchhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHHhccCCCCCCcC-------
Confidence 468887644 6678888777655432112211 112223445578778998877766654443
Q ss_pred cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC------------------CCHhh
Q 017679 211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT------------------KNPEQ 271 (368)
Q Consensus 211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t------------------~~L~~ 271 (368)
.+.+.+++.++...+++||+|+|||+|++ |+.++..|..+|+ .+++++|+. .++.+
T Consensus 164 ----v~~~Av~la~~~~~~l~~kkvlviGaG~~-a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~ 238 (414)
T PRK13940 164 ----VAFSAITLAKRQLDNISSKNVLIIGAGQT-GELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQ 238 (414)
T ss_pred ----HHHHHHHHHHHHhcCccCCEEEEEcCcHH-HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHH
Confidence 23778899988878899999999999998 9999999999996 799999872 13456
Q ss_pred hccCCCEEEEecCCCCc-ccCCCcCC-CcEEEEeecCCCC
Q 017679 272 ITSEADIVIAAAGVANL-VRGSWLKP-GAVVLDVGTCPVD 309 (368)
Q Consensus 272 ~~~~ADIVIsAvG~p~~-I~~e~ik~-gavVIDvg~n~~~ 309 (368)
.+.+||+||+||+.|++ |+.++++. ..++||++.+++-
T Consensus 239 ~l~~aDiVI~aT~a~~~vi~~~~~~~~~~~~iDLavPRdi 278 (414)
T PRK13940 239 LIKKADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQAL 278 (414)
T ss_pred HhccCCEEEECcCCCCeeECHHHhCCCCeEEEEeCCCCCC
Confidence 78999999999999998 68887753 4699999999875
No 62
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=98.79 E-value=1.2e-08 Score=101.81 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=107.3
Q ss_pred HHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcC
Q 017679 130 EEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREP 209 (368)
Q Consensus 130 ~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~ 209 (368)
=..|+++-.+ .|.|++.++++.-....=.|-. ...-..-+..++.-.|.|.--|.++.|...
T Consensus 96 VasGLDSmVl------GE~QIlGQVK~Ay~~A~~~g~~------g~~L~~lf~~A~~~aKrVRteT~I~~~~vS------ 157 (338)
T PRK00676 96 VTSGMDSLIL------GETEIQGQVKRAYLKAARERKL------PFALHFLFQKALKEGKVFRSKGGAPYAEVT------ 157 (338)
T ss_pred Hhcccchhhc------CcHHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCcC------
Confidence 3578888644 5677877777654332212211 111123344577778988876655544332
Q ss_pred ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----CCHh----hhccCCCEE
Q 017679 210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-----KNPE----QITSEADIV 279 (368)
Q Consensus 210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-----~~L~----~~~~~ADIV 279 (368)
-+.+++++++.. .+++||+|+|||+|++ |+.++..|.++|+ .|++++|+. .++. ++..++|||
T Consensus 158 -----v~s~av~~~~~~-~~l~~k~vLvIGaGem-~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvV 230 (338)
T PRK00676 158 -----IESVVQQELRRR-QKSKKASLLFIGYSEI-NRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVI 230 (338)
T ss_pred -----HHHHHHHHHHHh-CCccCCEEEEEcccHH-HHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEE
Confidence 235577777665 6799999999999997 9999999999995 799999983 2232 456799999
Q ss_pred EEe---cCCCCc-ccCCCcCC--CcEEEEeecCCCC
Q 017679 280 IAA---AGVANL-VRGSWLKP--GAVVLDVGTCPVD 309 (368)
Q Consensus 280 IsA---vG~p~~-I~~e~ik~--gavVIDvg~n~~~ 309 (368)
|++ |+.|++ ++.+++++ ..++||++.+++-
T Consensus 231 Is~t~~Tas~~p~i~~~~~~~~~~r~~iDLAvPRdI 266 (338)
T PRK00676 231 FFGSSESAYAFPHLSWESLADIPDRIVFDFNVPRTF 266 (338)
T ss_pred EEcCCcCCCCCceeeHHHHhhccCcEEEEecCCCCC
Confidence 997 678887 67777653 2489999999875
No 63
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.75 E-value=7.5e-08 Score=87.74 Aligned_cols=95 Identities=31% Similarity=0.330 Sum_probs=71.5
Q ss_pred CHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------
Q 017679 215 TPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------- 267 (368)
Q Consensus 215 Ta~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------------- 267 (368)
|+.+.+++ |++++.+++|++++|+|..+.+|+.++..|.++|+.|+++.|+..
T Consensus 7 ta~aav~~~~~~l~~~~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~ 86 (194)
T cd01078 7 TAAAAVAAAGKALELMGKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETS 86 (194)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC
Confidence 55555554 455677999999999997555699999999999999999977521
Q ss_pred ---CHhhhccCCCEEEEecCCCCc--ccCC-CcCCCcEEEEeecCCCC
Q 017679 268 ---NPEQITSEADIVIAAAGVANL--VRGS-WLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 268 ---~L~~~~~~ADIVIsAvG~p~~--I~~e-~ik~gavVIDvg~n~~~ 309 (368)
++.+.++++|+||++++.+.. ...+ ..+++.+|+|+.+++..
T Consensus 87 ~~~~~~~~~~~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~~~ 134 (194)
T cd01078 87 DDAARAAAIKGADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVPPV 134 (194)
T ss_pred CHHHHHHHHhcCCEEEECCCCCceechhhhcccCceeEEEEccCCCCC
Confidence 123567889999999987763 3333 34568999999999864
No 64
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.72 E-value=5.6e-08 Score=97.06 Aligned_cols=92 Identities=21% Similarity=0.216 Sum_probs=75.0
Q ss_pred HHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCCC---------------CHhhhccCCCEEE
Q 017679 218 GCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALTK---------------NPEQITSEADIVI 280 (368)
Q Consensus 218 gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t~---------------~L~~~~~~ADIVI 280 (368)
++..-.+..+.+++||+|+|+|++|.+|+.++..|.++ | ..+++++|+.. ++.+.+.++|+||
T Consensus 141 ~V~la~~~lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv 220 (340)
T PRK14982 141 QVEQNAPRLGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVV 220 (340)
T ss_pred HHHHhHHHhccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEE
Confidence 44444556777899999999999878899999999854 5 48999988632 2336778999999
Q ss_pred EecCCCCc--ccCCCcCCCcEEEEeecCCCC
Q 017679 281 AAAGVANL--VRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 281 sAvG~p~~--I~~e~ik~gavVIDvg~n~~~ 309 (368)
++++.|+. +++++++++.++||++.+++-
T Consensus 221 ~~ts~~~~~~I~~~~l~~~~~viDiAvPRDV 251 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKPCLMIDGGYPKNL 251 (340)
T ss_pred ECCcCCcCCcCCHHHhCCCeEEEEecCCCCC
Confidence 99998765 788999999999999999864
No 65
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=98.64 E-value=9.2e-08 Score=90.25 Aligned_cols=92 Identities=22% Similarity=0.315 Sum_probs=77.7
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE---EEEEeCC----CC--------------------
Q 017679 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT---VSIVHAL----TK-------------------- 267 (368)
Q Consensus 215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt---Vti~h~~----t~-------------------- 267 (368)
+-.|++..++..+.++++++++|+|+|++ |+.++.+|.+.|++ |++++|+ ..
T Consensus 8 ~lAG~~~al~~~g~~l~~~rvlvlGAGgA-g~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~ 86 (226)
T cd05311 8 TLAGLLNALKLVGKKIEEVKIVINGAGAA-GIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK 86 (226)
T ss_pred HHHHHHHHHHHhCCCccCCEEEEECchHH-HHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc
Confidence 45789999999999999999999999998 99999999999975 9999987 11
Q ss_pred ---CHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEEeecCCCC
Q 017679 268 ---NPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLDVGTCPVD 309 (368)
Q Consensus 268 ---~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVIDvg~n~~~ 309 (368)
++.+.++++|+||++++ ++.+++++++ ++.+|+|+. ||.+
T Consensus 87 ~~~~l~~~l~~~dvlIgaT~-~G~~~~~~l~~m~~~~ivf~ls-nP~~ 132 (226)
T cd05311 87 TGGTLKEALKGADVFIGVSR-PGVVKKEMIKKMAKDPIVFALA-NPVP 132 (226)
T ss_pred ccCCHHHHHhcCCEEEeCCC-CCCCCHHHHHhhCCCCEEEEeC-CCCC
Confidence 23455677999999999 7888888876 889999988 7754
No 66
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.58 E-value=1.2e-07 Score=97.38 Aligned_cols=94 Identities=23% Similarity=0.316 Sum_probs=79.4
Q ss_pred CCHHHHHHHHHHh-CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679 214 CTPKGCIELLIRS-GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 279 (368)
Q Consensus 214 cTa~gv~~lL~~~-~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV 279 (368)
+|..+++.-+++. ++.+.||+|+|+|.|.+ |+.++..|...|++|+++.+.. .++.+.++.||+|
T Consensus 193 gt~~s~~~ai~rat~~~l~Gk~VlViG~G~I-G~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVV 271 (425)
T PRK05476 193 GTGESLLDGIKRATNVLIAGKVVVVAGYGDV-GKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIF 271 (425)
T ss_pred HHHhhhHHHHHHhccCCCCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEE
Confidence 5678888777666 78899999999999985 9999999999999999997643 2466778899999
Q ss_pred EEecCCCCcccCC---CcCCCcEEEEeecCCC
Q 017679 280 IAAAGVANLVRGS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 280 IsAvG~p~~I~~e---~ik~gavVIDvg~n~~ 308 (368)
|+++|.++.++.+ .+|+|++++.+|....
T Consensus 272 I~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 272 VTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred EECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 9999998888754 4699999999998654
No 67
>PLN00203 glutamyl-tRNA reductase
Probab=98.58 E-value=5.1e-08 Score=102.35 Aligned_cols=146 Identities=14% Similarity=0.123 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHH
Q 017679 146 TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIR 225 (368)
Q Consensus 146 ~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~ 225 (368)
.|.|++.++++.-+...=.|-. ..+-..-+..+|.-.|.|.--|.++.|... .+.+.+++.++
T Consensus 195 GE~QIlgQVK~A~~~A~~~g~~------g~~L~~LF~~Ai~~~KrVRteT~I~~~~vS-----------v~s~Av~la~~ 257 (519)
T PLN00203 195 GEGQILAQVKQVVKVGQGVDGF------GRNLSGLFKHAITAGKRVRTETNIASGAVS-----------VSSAAVELALM 257 (519)
T ss_pred CChHHHHHHHHHHHHHHHcCCc------cHHHHHHHHHHHHHHHHHhhccCCCCCCcC-----------HHHHHHHHHHH
Confidence 4567777666554321111111 111123344477778888766655544332 24678888887
Q ss_pred hCC--CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------CCHhhhccCCCEEEEe
Q 017679 226 SGV--EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 226 ~~i--~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------~~L~~~~~~ADIVIsA 282 (368)
..- ++.+++|+|||+|++ |+.++..|...|+ .|++++++. .++.+.+.+||+||++
T Consensus 258 ~~~~~~l~~kkVlVIGAG~m-G~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 258 KLPESSHASARVLVIGAGKM-GKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred hcCCCCCCCCEEEEEeCHHH-HHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEc
Confidence 654 499999999999886 9999999999997 799998862 1344667899999999
Q ss_pred cCCCCc-ccCCCcCC----------CcEEEEeecCCCC
Q 017679 283 AGVANL-VRGSWLKP----------GAVVLDVGTCPVD 309 (368)
Q Consensus 283 vG~p~~-I~~e~ik~----------gavVIDvg~n~~~ 309 (368)
|+.++. ++++|+++ ..++||++.+++-
T Consensus 337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPRdI 374 (519)
T PLN00203 337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPRNV 374 (519)
T ss_pred cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCCCC
Confidence 998886 78888643 2499999999864
No 68
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.47 E-value=7.5e-07 Score=89.86 Aligned_cols=124 Identities=25% Similarity=0.286 Sum_probs=86.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEecC---C
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAAG---V 285 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG---~ 285 (368)
+.+++|+|||+|.+ |+.++..|...|++|++++++. .++.+.+++||+||++++ .
T Consensus 165 l~~~~VlViGaG~v-G~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~ 243 (370)
T TIGR00518 165 VEPGDVTIIGGGVV-GTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGA 243 (370)
T ss_pred CCCceEEEEcCCHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCC
Confidence 57789999999875 9999999999999999998642 134567789999999984 3
Q ss_pred --CCcccCCC---cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhc---cceEeccCCCcccHHHHHHHHHHH
Q 017679 286 --ANLVRGSW---LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMR---LASVITPVPGGVGPMTVAMLLSNT 357 (368)
Q Consensus 286 --p~~I~~e~---ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~---~a~~iTPVPGGVGp~T~amLl~N~ 357 (368)
|.+++.++ +++|.+|||+++.+.- +.+ ..+ .+..|++.+.. ..-.+.-.||-+ |.|...++.|.
T Consensus 244 ~~p~lit~~~l~~mk~g~vIvDva~d~GG-----~~e-~~~-~t~~d~p~~~~~Gv~~~~v~nlP~~~-p~~aS~~~~~~ 315 (370)
T TIGR00518 244 KAPKLVSNSLVAQMKPGAVIVDVAIDQGG-----CVE-TSR-PTTHDQPTYAVHDVVHYCVANMPGAV-PKTSTYALTNA 315 (370)
T ss_pred CCCcCcCHHHHhcCCCCCEEEEEecCCCC-----Ccc-CCc-CCCCCCCEEEECCeEEEEeCCccccc-HHHHHHHHHHH
Confidence 55677765 4789999999987531 100 000 12112111100 123455689999 99999999888
Q ss_pred HHHHH
Q 017679 358 LDSAK 362 (368)
Q Consensus 358 v~a~~ 362 (368)
+..+-
T Consensus 316 l~~~l 320 (370)
T TIGR00518 316 TMPYV 320 (370)
T ss_pred HHHHH
Confidence 75543
No 69
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.46 E-value=5.5e-07 Score=91.95 Aligned_cols=94 Identities=27% Similarity=0.360 Sum_probs=76.7
Q ss_pred CCHHHHHHHHH-HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679 214 CTPKGCIELLI-RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 279 (368)
Q Consensus 214 cTa~gv~~lL~-~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV 279 (368)
+|...+++-+. ..++.+.||+|+|+|.|.+ |+.+++.|...|++|+++.+.. .++.+.++.+|+|
T Consensus 176 g~g~s~~~~i~r~t~~~l~Gk~VvViG~G~I-G~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVV 254 (406)
T TIGR00936 176 GTGQSTIDGILRATNLLIAGKTVVVAGYGWC-GKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 254 (406)
T ss_pred ccchhHHHHHHHhcCCCCCcCEEEEECCCHH-HHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEE
Confidence 45565555444 4578899999999999986 9999999999999999986543 2356778899999
Q ss_pred EEecCCCCcccC---CCcCCCcEEEEeecCCC
Q 017679 280 IAAAGVANLVRG---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 280 IsAvG~p~~I~~---e~ik~gavVIDvg~n~~ 308 (368)
|+++|.++.++. ..+|+|++++.+|....
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 999999988876 45699999999998654
No 70
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.44 E-value=4.3e-07 Score=92.96 Aligned_cols=93 Identities=18% Similarity=0.267 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-----------------CHhhhccCCC
Q 017679 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQITSEAD 277 (368)
Q Consensus 216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-----------------~L~~~~~~AD 277 (368)
+...+++.+....++.|++|+|||+|.+ |+.++..|...|+ .|++++++.. ++.+.+..+|
T Consensus 166 ~~~Av~~a~~~~~~~~~~~vlViGaG~i-G~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aD 244 (423)
T PRK00045 166 ASAAVELAKQIFGDLSGKKVLVIGAGEM-GELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEAD 244 (423)
T ss_pred HHHHHHHHHHhhCCccCCEEEEECchHH-HHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCC
Confidence 3445666665544789999999999886 9999999999997 7999988631 2335678899
Q ss_pred EEEEecCCCCc-ccCCCcCC--------CcEEEEeecCCCC
Q 017679 278 IVIAAAGVANL-VRGSWLKP--------GAVVLDVGTCPVD 309 (368)
Q Consensus 278 IVIsAvG~p~~-I~~e~ik~--------gavVIDvg~n~~~ 309 (368)
+||+|||.|+. ++.+|+++ +.++||++.++.-
T Consensus 245 vVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prdi 285 (423)
T PRK00045 245 IVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRDI 285 (423)
T ss_pred EEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCCC
Confidence 99999999886 78888854 4799999987753
No 71
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.43 E-value=3.7e-07 Score=93.33 Aligned_cols=93 Identities=24% Similarity=0.288 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCCC-----------------CHhhhccCCC
Q 017679 216 PKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALTK-----------------NPEQITSEAD 277 (368)
Q Consensus 216 a~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t~-----------------~L~~~~~~AD 277 (368)
+.+++++.++...++.|++|+|||+|.+ |+.++..|...| ..|++++++.. ++.+.+..+|
T Consensus 164 ~~~Av~la~~~~~~l~~~~VlViGaG~i-G~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aD 242 (417)
T TIGR01035 164 SSAAVELAERIFGSLKGKKALLIGAGEM-GELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEAD 242 (417)
T ss_pred HHHHHHHHHHHhCCccCCEEEEECChHH-HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCC
Confidence 3566667766656799999999999886 999999999999 68999987631 2445678999
Q ss_pred EEEEecCCCCc-ccCCCcCC-------CcEEEEeecCCCC
Q 017679 278 IVIAAAGVANL-VRGSWLKP-------GAVVLDVGTCPVD 309 (368)
Q Consensus 278 IVIsAvG~p~~-I~~e~ik~-------gavVIDvg~n~~~ 309 (368)
+||++||.|+. ++.+|+++ ..++||++.++.-
T Consensus 243 vVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdi 282 (417)
T TIGR01035 243 IVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDV 282 (417)
T ss_pred EEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 99999998886 78888753 3599999977643
No 72
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.38 E-value=7.8e-07 Score=87.53 Aligned_cols=117 Identities=32% Similarity=0.493 Sum_probs=81.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------CCHhhhccCCCEEEEec---C-
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------KNPEQITSEADIVIAAA---G- 284 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------~~L~~~~~~ADIVIsAv---G- 284 (368)
....+|+|||.| +||.-.|++....||+|||...+- .++++.+++||+||.|+ |
T Consensus 166 V~~~kv~iiGGG-vvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpga 244 (371)
T COG0686 166 VLPAKVVVLGGG-VVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGA 244 (371)
T ss_pred CCCccEEEECCc-cccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCC
Confidence 455789999965 579999999999999999997651 35789999999999887 3
Q ss_pred -CCCcccCCCc---CCCcEEEEeecCCC---CCCCCCCCCCC--cEEEcccchhhhhccceEeccCCCcccHHHHHHHHH
Q 017679 285 -VANLVRGSWL---KPGAVVLDVGTCPV---DVSVDPSCEYG--YRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLS 355 (368)
Q Consensus 285 -~p~~I~~e~i---k~gavVIDvg~n~~---~~~~d~t~~~~--~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~ 355 (368)
.|.+++.+|+ |||+++||+++..- |++ .+|++.+ +..-|-+.| ++.-.||-| |-|..+-+.
T Consensus 245 kaPkLvt~e~vk~MkpGsVivDVAiDqGGc~Et~-~~TTh~~PtY~~~gvvhY--------~VaNmPgaV-prTst~AL~ 314 (371)
T COG0686 245 KAPKLVTREMVKQMKPGSVIVDVAIDQGGCFETS-HPTTHDDPTYEVDGVVHY--------GVANMPGAV-PRTSTQALT 314 (371)
T ss_pred CCceehhHHHHHhcCCCcEEEEEEEcCCCceecc-ccccCCCCceeecCEEEE--------ecCCCCccc-cchhHHHhh
Confidence 4778888864 88999999999753 221 1121111 111222222 222456655 888888777
Q ss_pred HH
Q 017679 356 NT 357 (368)
Q Consensus 356 N~ 357 (368)
|.
T Consensus 315 na 316 (371)
T COG0686 315 NA 316 (371)
T ss_pred hc
Confidence 74
No 73
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.37 E-value=5e-07 Score=88.86 Aligned_cols=154 Identities=20% Similarity=0.260 Sum_probs=98.1
Q ss_pred HcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCc
Q 017679 131 EVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPL 210 (368)
Q Consensus 131 ~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~ 210 (368)
..|+++-.+ .|.|++.++++.-+...=.|.. ...-..-..+++.-.|.|.--+....+.+
T Consensus 100 a~GLdS~v~------GE~qIlgQvk~A~~~a~~~g~~------~~~L~~lf~~a~~~~k~vr~et~i~~~~~-------- 159 (311)
T cd05213 100 ASGLDSMVV------GETQILGQVKNAYKLAKEAGTS------GKLLNRLFQKAIKVGKRVRTETGISRGAV-------- 159 (311)
T ss_pred Hhhhhhhhc------CChHHHHHHHHHHHHHHHcCCc------hHHHHHHHHHHHHHHHHHhhhcCCCCCCc--------
Confidence 467877644 5677777776654432111211 00111222335555677765544443222
Q ss_pred cccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCCC-----------------CHhhh
Q 017679 211 FIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALTK-----------------NPEQI 272 (368)
Q Consensus 211 ~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t~-----------------~L~~~ 272 (368)
..+...+++.+...-++.|++|+|||.|.+ |+.++..|...|+ .|++++++.. ++.+.
T Consensus 160 ---sv~~~Av~~a~~~~~~l~~~~V~ViGaG~i-G~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~ 235 (311)
T cd05213 160 ---SISSAAVELAEKIFGNLKGKKVLVIGAGEM-GELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLEL 235 (311)
T ss_pred ---CHHHHHHHHHHHHhCCccCCEEEEECcHHH-HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHH
Confidence 223445677776655689999999999886 9999999998774 7999987631 24566
Q ss_pred ccCCCEEEEecCCCCc---ccC---CCcCCCcEEEEeecCCC
Q 017679 273 TSEADIVIAAAGVANL---VRG---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 273 ~~~ADIVIsAvG~p~~---I~~---e~ik~gavVIDvg~n~~ 308 (368)
+.++|+||++||.|+. +.. ..-.++.++||++.++.
T Consensus 236 l~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrd 277 (311)
T cd05213 236 LNEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRD 277 (311)
T ss_pred HhcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCC
Confidence 7889999999998876 211 12235789999997764
No 74
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.30 E-value=2.2e-06 Score=87.79 Aligned_cols=95 Identities=26% Similarity=0.370 Sum_probs=76.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEE
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIV 279 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIV 279 (368)
-|--..+-.+++..++.+.|++|+|+|.|.+ |+.++..+...||+|+++.... .++.+.++.+|+|
T Consensus 183 g~g~s~~~~i~r~t~~~l~GktVvViG~G~I-G~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVV 261 (413)
T cd00401 183 GCRESLIDGIKRATDVMIAGKVAVVAGYGDV-GKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIF 261 (413)
T ss_pred hhchhhHHHHHHhcCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEE
Confidence 3433344555666788999999999999986 9999999999999999986542 2356778899999
Q ss_pred EEecCCCCcccC---CCcCCCcEEEEeecCCC
Q 017679 280 IAAAGVANLVRG---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 280 IsAvG~p~~I~~---e~ik~gavVIDvg~n~~ 308 (368)
|.++|.++.+.. +.+++|.+++.+|....
T Consensus 262 I~atG~~~~i~~~~l~~mk~GgilvnvG~~~~ 293 (413)
T cd00401 262 VTTTGNKDIITGEHFEQMKDGAIVCNIGHFDV 293 (413)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 999999887754 46799999999997643
No 75
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.29 E-value=1.4e-06 Score=78.79 Aligned_cols=83 Identities=25% Similarity=0.329 Sum_probs=66.0
Q ss_pred HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecC-CC---C
Q 017679 225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAG-VA---N 287 (368)
Q Consensus 225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG-~p---~ 287 (368)
..+.++.||+|.|||.|.+ |+.+|.+|...|++|+.++++. .++.+.+++||+|+...+ .+ +
T Consensus 29 ~~~~~l~g~tvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~ 107 (178)
T PF02826_consen 29 FPGRELRGKTVGIIGYGRI-GRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRG 107 (178)
T ss_dssp TTBS-STTSEEEEESTSHH-HHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTT
T ss_pred CCccccCCCEEEEEEEcCC-cCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccce
Confidence 3456899999999999987 9999999999999999998864 367889999999998887 23 4
Q ss_pred cccCC---CcCCCcEEEEeecCCC
Q 017679 288 LVRGS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 288 ~I~~e---~ik~gavVIDvg~n~~ 308 (368)
+|+.+ .+|+|+++|++|--.+
T Consensus 108 li~~~~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 108 LINAEFLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp SBSHHHHHTSTTTEEEEESSSGGG
T ss_pred eeeeeeeeccccceEEEeccchhh
Confidence 67765 4589999999996543
No 76
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=98.28 E-value=1.8e-06 Score=86.37 Aligned_cols=87 Identities=26% Similarity=0.387 Sum_probs=73.4
Q ss_pred HHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCC
Q 017679 221 ELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 221 ~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
-+++..++-+.||+|||.|.|-+ ||.+|+.|...||.|.+..-.. ..+.+..+.+||+|++||.-+
T Consensus 198 gI~RaTn~liaGK~vVV~GYG~v-GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkd 276 (420)
T COG0499 198 GILRATNVLLAGKNVVVAGYGWV-GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKD 276 (420)
T ss_pred HHHhhhceeecCceEEEeccccc-chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcC
Confidence 34455889999999999999985 9999999999999999986543 246688899999999999999
Q ss_pred cccCCCc---CCCcEEEEeecCCC
Q 017679 288 LVRGSWL---KPGAVVLDVGTCPV 308 (368)
Q Consensus 288 ~I~~e~i---k~gavVIDvg~n~~ 308 (368)
.|+.+++ |.|+++.+.|..-.
T Consensus 277 Vi~~eh~~~MkDgaIl~N~GHFd~ 300 (420)
T COG0499 277 VIRKEHFEKMKDGAILANAGHFDV 300 (420)
T ss_pred ccCHHHHHhccCCeEEecccccce
Confidence 9988875 78999999995433
No 77
>PLN02494 adenosylhomocysteinase
Probab=98.24 E-value=2.7e-06 Score=88.20 Aligned_cols=91 Identities=24% Similarity=0.312 Sum_probs=73.8
Q ss_pred CHHHHHHHH-HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEE
Q 017679 215 TPKGCIELL-IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVI 280 (368)
Q Consensus 215 Ta~gv~~lL-~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVI 280 (368)
|-+.+++.+ +..++.+.||+|+|+|.|.+ |+.+|+.|...|++|+++.+... ++.+.++.||+||
T Consensus 236 tgqS~~d~i~r~t~i~LaGKtVvViGyG~I-Gr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI 314 (477)
T PLN02494 236 CRHSLPDGLMRATDVMIAGKVAVICGYGDV-GKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFV 314 (477)
T ss_pred ccccHHHHHHHhcCCccCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEE
Confidence 334445444 45588899999999999986 99999999999999999865431 3567789999999
Q ss_pred EecCCCCcccC---CCcCCCcEEEEeecC
Q 017679 281 AAAGVANLVRG---SWLKPGAVVLDVGTC 306 (368)
Q Consensus 281 sAvG~p~~I~~---e~ik~gavVIDvg~n 306 (368)
+++|..+++.. +.+|+|++++.+|..
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 99999888743 467999999999984
No 78
>PLN02928 oxidoreductase family protein
Probab=98.19 E-value=3e-06 Score=84.85 Aligned_cols=136 Identities=21% Similarity=0.256 Sum_probs=91.3
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------------CCHhhhccCCCEEEEe
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------------~~L~~~~~~ADIVIsA 282 (368)
.++.||++.|||.|.+ |+.+|..|...|++|+.++++. .+|.+.+++||+|+.+
T Consensus 155 ~~l~gktvGIiG~G~I-G~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 155 DTLFGKTVFILGYGAI-GIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred cCCCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 4799999999999987 9999999999999999987641 2577889999999999
Q ss_pred cCC----CCcccCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEEEc---ccchhhh--------hccceEeccCC
Q 017679 283 AGV----ANLVRGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRLMG---DVCYEEA--------MRLASVITPVP 342 (368)
Q Consensus 283 vG~----p~~I~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~G---DVd~~~~--------~~~a~~iTPVP 342 (368)
++. .++|..+ .+|+|+++|++|--.+-+. +.. .-..|++.| ||-..+- ....-.+||=-
T Consensus 234 lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVde-~AL~~AL~~g~i~gAaLDV~~~EP~~~~~pL~~~~nviiTPHi 312 (347)
T PLN02928 234 CTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLDY-DAVLAALESGHLGGLAIDVAWSEPFDPDDPILKHPNVIITPHV 312 (347)
T ss_pred CCCChHhhcccCHHHHhcCCCCeEEEECCCccccCH-HHHHHHHHcCCeeEEEEccCCCCCCCCCChhhcCCCEEECCcC
Confidence 873 3467665 4589999999996554310 000 001234433 5532221 01134688887
Q ss_pred CcccHHHHHHHHHHHHHHHHHHh
Q 017679 343 GGVGPMTVAMLLSNTLDSAKRAY 365 (368)
Q Consensus 343 GGVGp~T~amLl~N~v~a~~~~~ 365 (368)
||.-.-+..-+...+++..++|+
T Consensus 313 a~~t~~~~~~~~~~~~~nl~~~~ 335 (347)
T PLN02928 313 AGVTEYSYRSMGKIVGDAALQLH 335 (347)
T ss_pred CCChHHHHHHHHHHHHHHHHHHH
Confidence 87765555555555555555544
No 79
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.10 E-value=2.3e-05 Score=82.22 Aligned_cols=185 Identities=16% Similarity=0.226 Sum_probs=109.5
Q ss_pred HHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccC----CHHHHHHHHHHhCC
Q 017679 153 ALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPC----TPKGCIELLIRSGV 228 (368)
Q Consensus 153 ~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~Pc----Ta~gv~~lL~~~~i 228 (368)
.++.|+++ .+++.+.+|.+ + .++++.+. +|-+-.+.-.-.=|+...++.+.+-+- =..|+++....++-
T Consensus 78 e~~~l~~g----~tli~~l~p~~-n-~~ll~~l~-~k~it~ia~E~vprisraq~~d~lssma~iAGy~Avi~Aa~~lgr 150 (511)
T TIGR00561 78 EIAELPAG----KALVSFIWPAQ-N-PELMEKLA-AKNITVLAMDAVPRISRAQKLDALSSMANIAGYRAIIEAAHEFGR 150 (511)
T ss_pred HHHhcCCC----CEEEEEcCccC-C-HHHHHHHH-HcCCEEEEeecccccccCCccCcchhhHHHHHHHHHHHHHHHhhh
Confidence 36667664 46777777754 3 45555553 222322211111122111111111110 02667777666543
Q ss_pred ----------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------C---------------
Q 017679 229 ----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N--------------- 268 (368)
Q Consensus 229 ----------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~--------------- 268 (368)
.+.+.+|+|+|.|.+ |...+..+...|+.|+++..+.. +
T Consensus 151 ~~~g~~taag~vp~akVlViGaG~i-Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~ 229 (511)
T TIGR00561 151 FFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVM 229 (511)
T ss_pred hcCCceecCCCCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeec
Confidence 245689999999876 99999999999999999865420 0
Q ss_pred -----------HhhhccCCCEEEEec---C--CCCcccCCCc---CCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchh
Q 017679 269 -----------PEQITSEADIVIAAA---G--VANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYE 329 (368)
Q Consensus 269 -----------L~~~~~~ADIVIsAv---G--~p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~ 329 (368)
+.+.++++||||+++ | .|.+++.+|+ |+|.+|||++..+- |++++-
T Consensus 230 s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G---------------Gn~E~t 294 (511)
T TIGR00561 230 SEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG---------------GNCEYT 294 (511)
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC---------------CCEEEe
Confidence 345678999999999 5 4557888775 88999999998642 222221
Q ss_pred h----hhc----cceEeccCCCcccHHHHHHHHHHHHHH
Q 017679 330 E----AMR----LASVITPVPGGVGPMTVAMLLSNTLDS 360 (368)
Q Consensus 330 ~----~~~----~a~~iTPVPGGVGp~T~amLl~N~v~a 360 (368)
. ... ..-.++-.|+-+-+-+..++-.|++.-
T Consensus 295 ~p~~~~~~~~GV~~~gv~nlPs~~p~~AS~l~s~nl~~~ 333 (511)
T TIGR00561 295 KPGEVYTTENQVKVIGYTDLPSRLPTQSSQLYGTNLVNL 333 (511)
T ss_pred cCceEEEecCCEEEEeeCCccccCHHHHHHHHHHHHHHH
Confidence 0 000 122456778888666665555555433
No 80
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=98.03 E-value=1.3e-05 Score=81.41 Aligned_cols=144 Identities=19% Similarity=0.217 Sum_probs=93.8
Q ss_pred HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC-------
Q 017679 222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV------- 285 (368)
Q Consensus 222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~------- 285 (368)
+.++.+.++.||+|.|||.|++ |+.+|..|...|++|..++... .+|.+.+++||||+..++-
T Consensus 106 l~r~~g~~L~gktvGIIG~G~I-G~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~ 184 (378)
T PRK15438 106 LAERDGFSLHDRTVGIVGVGNV-GRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYK 184 (378)
T ss_pred HhccCCCCcCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccc
Confidence 3456788999999999999986 9999999999999999987421 2588999999999977752
Q ss_pred -CCcccCC---CcCCCcEEEEeecCCCCCCC---CCCCC-CCcEEEcccchhh------hhccceEeccCCCcccHHHHH
Q 017679 286 -ANLVRGS---WLKPGAVVLDVGTCPVDVSV---DPSCE-YGYRLMGDVCYEE------AMRLASVITPVPGGVGPMTVA 351 (368)
Q Consensus 286 -p~~I~~e---~ik~gavVIDvg~n~~~~~~---d~t~~-~~~kl~GDVd~~~------~~~~a~~iTPVPGGVGp~T~a 351 (368)
-+++..+ .+|+|+++|++|--.+-+.. +.... .-....=||-..+ ..+....+||=-+|...-+..
T Consensus 185 T~~li~~~~l~~mk~gailIN~aRG~vVDe~AL~~aL~~g~~~ga~LDV~e~EP~~~~~Ll~~~~i~TPHiAg~s~e~~~ 264 (378)
T PRK15438 185 TLHLADEKLIRSLKPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVDIGTPHIAGYTLEGKA 264 (378)
T ss_pred cccccCHHHHhcCCCCcEEEECCCchhcCHHHHHHHHHhCCCcEEEEecCCCCCCCchhhhhcCCEECCccCcCcHHHHH
Confidence 1346544 56899999999976653100 00000 0112344552111 112233788988887655554
Q ss_pred HHHHHHHHHHHHHhC
Q 017679 352 MLLSNTLDSAKRAYG 366 (368)
Q Consensus 352 mLl~N~v~a~~~~~~ 366 (368)
.....++++..+++|
T Consensus 265 ~~~~~~~~~l~~~~~ 279 (378)
T PRK15438 265 RGTTQVFEAYSKFIG 279 (378)
T ss_pred HHHHHHHHHHHHHHc
Confidence 444445555555554
No 81
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=98.02 E-value=1.4e-05 Score=81.16 Aligned_cols=144 Identities=20% Similarity=0.205 Sum_probs=95.9
Q ss_pred HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC-C-----
Q 017679 222 LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV-A----- 286 (368)
Q Consensus 222 lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~-p----- 286 (368)
+.++.+.++.||+|.|||.|++ |+.++..|...|++|..+.... .++.+.+++||+|+..++- +
T Consensus 106 l~r~~g~~l~gktvGIIG~G~I-G~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~ 184 (381)
T PRK00257 106 LAEREGVDLAERTYGVVGAGHV-GGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEHP 184 (381)
T ss_pred HhcccCCCcCcCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCcccc
Confidence 3456778999999999999986 9999999999999999986421 2678889999999988872 2
Q ss_pred --CcccCC---CcCCCcEEEEeecCCCCCCCCCCC--CCCc---EEEcccchh------hhhccceEeccCCCcccHHHH
Q 017679 287 --NLVRGS---WLKPGAVVLDVGTCPVDVSVDPSC--EYGY---RLMGDVCYE------EAMRLASVITPVPGGVGPMTV 350 (368)
Q Consensus 287 --~~I~~e---~ik~gavVIDvg~n~~~~~~d~t~--~~~~---kl~GDVd~~------~~~~~a~~iTPVPGGVGp~T~ 350 (368)
++|..+ .+|+|+++|+++.-.+-+.. ..- -..| ...=||=.. ......-.+||=-+|...=+.
T Consensus 185 T~~li~~~~l~~mk~gailIN~aRG~vVde~-AL~~aL~~g~i~~a~LDV~e~EP~~~~~L~~~nvi~TPHiAg~s~e~~ 263 (381)
T PRK00257 185 TRHLLDEAFLASLRPGAWLINASRGAVVDNQ-ALREALLSGEDLDAVLDVWEGEPQIDLELADLCTIATPHIAGYSLDGK 263 (381)
T ss_pred ccccCCHHHHhcCCCCeEEEECCCCcccCHH-HHHHHHHhCCCcEEEEeCCCCCCCCChhhhhCCEEEcCccccCCHHHH
Confidence 467554 56899999999976653100 000 0011 233455211 111234568888888766555
Q ss_pred HHHHHHHHHHHHHHhCC
Q 017679 351 AMLLSNTLDSAKRAYGF 367 (368)
Q Consensus 351 amLl~N~v~a~~~~~~~ 367 (368)
.-....+++...++++.
T Consensus 264 ~r~~~~~~~nl~~~~~~ 280 (381)
T PRK00257 264 ARGTAQIYQALCRFFGI 280 (381)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 55555555555555543
No 82
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=98.02 E-value=1.9e-05 Score=76.61 Aligned_cols=93 Identities=13% Similarity=0.230 Sum_probs=73.9
Q ss_pred HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhccCC
Q 017679 217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITSEA 276 (368)
Q Consensus 217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~~A 276 (368)
..+++-.++.|++++..+|.|+|+-+.+|..+++.|..++....+++|... ++.....++
T Consensus 152 r~Vl~~~~~lGidlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~l~e~~~~~~i~s~d~~~~~e 231 (351)
T COG5322 152 RQVLKHFAQLGIDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTLLQEELGRGKIMSLDYALPQE 231 (351)
T ss_pred HHHHHHHHHhCcCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhhcccccCCCeeeecccccccc
Confidence 346666778899999999999999999999999999999998888886421 122334455
Q ss_pred CEEE-EecCCCCc-ccCCCcCCCcEEEEeecCCCC
Q 017679 277 DIVI-AAAGVANL-VRGSWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 277 DIVI-sAvG~p~~-I~~e~ik~gavVIDvg~n~~~ 309 (368)
|++| +|+-.++. |.+.++|||++|+|-|++.+-
T Consensus 232 ~i~v~vAs~~~g~~I~pq~lkpg~~ivD~g~P~dv 266 (351)
T COG5322 232 DILVWVASMPKGVEIFPQHLKPGCLIVDGGYPKDV 266 (351)
T ss_pred ceEEEEeecCCCceechhhccCCeEEEcCCcCccc
Confidence 5555 77776665 899999999999999998754
No 83
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.96 E-value=1.4e-05 Score=79.53 Aligned_cols=81 Identities=19% Similarity=0.315 Sum_probs=66.9
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR 290 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~ 290 (368)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. ++|.
T Consensus 145 g~~L~gktvgIiG~G~I-G~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~ 223 (333)
T PRK13243 145 GYDVYGKTIGIIGFGRI-GQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMIN 223 (333)
T ss_pred ccCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccC
Confidence 35789999999999987 9999999999999999887642 25778899999999998742 3565
Q ss_pred C---CCcCCCcEEEEeecCCC
Q 017679 291 G---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 291 ~---e~ik~gavVIDvg~n~~ 308 (368)
. +.+|+|+++|+++.-.+
T Consensus 224 ~~~~~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 224 EERLKLMKPTAILVNTARGKV 244 (333)
T ss_pred HHHHhcCCCCeEEEECcCchh
Confidence 4 45789999999997664
No 84
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.96 E-value=2.1e-05 Score=72.80 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=66.7
Q ss_pred cCCHHHHHHHHH----Hh--CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--------------hhh
Q 017679 213 PCTPKGCIELLI----RS--GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--------------EQI 272 (368)
Q Consensus 213 PcTa~gv~~lL~----~~--~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--------------~~~ 272 (368)
|.|.+|+...++ +. +.+++||+++|+|.|+ +|+.++..|.+.|++|++++++...+ .+.
T Consensus 3 ~aTg~Gv~~~~~~~~~~~~~~~~l~gk~v~I~G~G~-vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l 81 (200)
T cd01075 3 PPTAYGVFLGMKAAAEHLLGTDSLEGKTVAVQGLGK-VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEI 81 (200)
T ss_pred ChhHHHHHHHHHHHHHHhcCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhh
Confidence 668888755544 33 7899999999999997 59999999999999999887654211 122
Q ss_pred c-cCCCEEEEecCCCCcccCCCcCC--CcEEEEeecCCC
Q 017679 273 T-SEADIVIAAAGVANLVRGSWLKP--GAVVLDVGTCPV 308 (368)
Q Consensus 273 ~-~~ADIVIsAvG~p~~I~~e~ik~--gavVIDvg~n~~ 308 (368)
. .++|+++.++.. +.|+.+.++. ..+|++-+-+|.
T Consensus 82 ~~~~~Dv~vp~A~~-~~I~~~~~~~l~~~~v~~~AN~~~ 119 (200)
T cd01075 82 YSVDADVFAPCALG-GVINDDTIPQLKAKAIAGAANNQL 119 (200)
T ss_pred ccccCCEEEecccc-cccCHHHHHHcCCCEEEECCcCcc
Confidence 2 379999955542 3555554432 457788776654
No 85
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.94 E-value=1.5e-05 Score=73.97 Aligned_cols=112 Identities=18% Similarity=0.271 Sum_probs=72.7
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH-----------------hhhccCCCEEEEecCCCCc-
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL- 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L-----------------~~~~~~ADIVIsAvG~p~~- 288 (368)
++++||+|+|||.|.+ |.-.+..|.+.|+.|+++...- +++ .+.+..+|+||+||+.+..
T Consensus 6 l~l~~k~vLVIGgG~v-a~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~elN 84 (202)
T PRK06718 6 IDLSNKRVVIVGGGKV-AGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPRVN 84 (202)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHHHH
Confidence 5789999999998875 9999999999999999996542 111 2357889999999998764
Q ss_pred --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679 289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL 358 (368)
Q Consensus 289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v 358 (368)
|.... +.+.. +.+.-++.. ||+-|....+. .-+|+ -||-+|..+..|-+++-
T Consensus 85 ~~i~~~a-~~~~l-vn~~d~~~~--------------~~f~~Pa~~~~g~l~iaIs--T~G~sP~la~~lr~~ie 141 (202)
T PRK06718 85 EQVKEDL-PENAL-FNVITDAES--------------GNVVFPSALHRGKLTISVS--TDGASPKLAKKIRDELE 141 (202)
T ss_pred HHHHHHH-HhCCc-EEECCCCcc--------------CeEEEeeEEEcCCeEEEEE--CCCCChHHHHHHHHHHH
Confidence 43333 44543 344433211 33333333221 22333 47889988777655444
No 86
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.92 E-value=1.7e-05 Score=78.39 Aligned_cols=136 Identities=20% Similarity=0.223 Sum_probs=90.3
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------CCHhhhccCCCEEEEecCC----CCcccCC---
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------KNPEQITSEADIVIAAAGV----ANLVRGS--- 292 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------~~L~~~~~~ADIVIsAvG~----p~~I~~e--- 292 (368)
.++.||++.|||.|.+ |+.+|.+|...|++|..+++.. .+|.+.+++||+|+..++. -++|+.+
T Consensus 143 ~~l~gktvgIiG~G~I-G~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~ 221 (314)
T PRK06932 143 TDVRGSTLGVFGKGCL-GTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLA 221 (314)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHH
Confidence 4689999999999997 9999999999999998776432 2578999999999988872 3467665
Q ss_pred CcCCCcEEEEeecCCCCCCCCCCC--CCCcEE---Ecccchhh-------hh-----ccceEeccCCCcccHHHHHHHHH
Q 017679 293 WLKPGAVVLDVGTCPVDVSVDPSC--EYGYRL---MGDVCYEE-------AM-----RLASVITPVPGGVGPMTVAMLLS 355 (368)
Q Consensus 293 ~ik~gavVIDvg~n~~~~~~d~t~--~~~~kl---~GDVd~~~-------~~-----~~a~~iTPVPGGVGp~T~amLl~ 355 (368)
.+|+|+++|++|--.+-+. +... -..|++ .-||-..+ .. --.-.+||=-||.-.-+..-+..
T Consensus 222 ~mk~ga~lIN~aRG~~Vde-~AL~~aL~~g~i~gAaLDV~~~EP~~~~~pl~~~~~~~pnvilTPHia~~t~e~~~~~~~ 300 (314)
T PRK06932 222 LMKPTAFLINTGRGPLVDE-QALLDALENGKIAGAALDVLVKEPPEKDNPLIQAAKRLPNLLITPHIAWASDSAVTTLVN 300 (314)
T ss_pred hCCCCeEEEECCCccccCH-HHHHHHHHcCCccEEEEecCCCCCCCCCChhhHhhcCCCCEEECCccccCcHHHHHHHHH
Confidence 5699999999997654310 0000 012233 34553221 00 11336788778776555555555
Q ss_pred HHHHHHHHHh
Q 017679 356 NTLDSAKRAY 365 (368)
Q Consensus 356 N~v~a~~~~~ 365 (368)
.+++..++++
T Consensus 301 ~~~~ni~~~~ 310 (314)
T PRK06932 301 KVAQNIEEFV 310 (314)
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 87
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.92 E-value=2e-05 Score=77.62 Aligned_cols=81 Identities=19% Similarity=0.317 Sum_probs=66.9
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC----CCcccC---
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRG--- 291 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~----p~~I~~--- 291 (368)
.++.||++.|||.|.+ |+.+|.+|...|++|..++++. .++++.+++||+|+...+. -++|..
T Consensus 118 ~~L~gktvgIiG~G~I-G~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l 196 (303)
T PRK06436 118 KLLYNKSLGILGYGGI-GRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML 196 (303)
T ss_pred CCCCCCEEEEECcCHH-HHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence 4789999999999986 9999999999999999988642 3678889999999998873 235654
Q ss_pred CCcCCCcEEEEeecCCCC
Q 017679 292 SWLKPGAVVLDVGTCPVD 309 (368)
Q Consensus 292 e~ik~gavVIDvg~n~~~ 309 (368)
+.+|+|+++|++|.-...
T Consensus 197 ~~mk~ga~lIN~sRG~~v 214 (303)
T PRK06436 197 SLFRKGLAIINVARADVV 214 (303)
T ss_pred hcCCCCeEEEECCCcccc
Confidence 356899999999976653
No 88
>PRK06487 glycerate dehydrogenase; Provisional
Probab=97.89 E-value=2.2e-05 Score=77.61 Aligned_cols=136 Identities=16% Similarity=0.189 Sum_probs=89.7
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------CCHhhhccCCCEEEEecCC----CCcccCC---C
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------KNPEQITSEADIVIAAAGV----ANLVRGS---W 293 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------~~L~~~~~~ADIVIsAvG~----p~~I~~e---~ 293 (368)
.++.||++.|||.|.+ |+.+|.+|...|++|...++.. .+|.+.+++||+|+..++. -++|+.+ .
T Consensus 144 ~~l~gktvgIiG~G~I-G~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~ 222 (317)
T PRK06487 144 VELEGKTLGLLGHGEL-GGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELAL 222 (317)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhc
Confidence 3689999999999997 9999999999999998776542 2588999999999988873 3467665 5
Q ss_pred cCCCcEEEEeecCCCCCCCCCC--CCCCcEEE---cccchhh-------hh---ccceEeccCCCcccHHHHHHHHHHHH
Q 017679 294 LKPGAVVLDVGTCPVDVSVDPS--CEYGYRLM---GDVCYEE-------AM---RLASVITPVPGGVGPMTVAMLLSNTL 358 (368)
Q Consensus 294 ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~---GDVd~~~-------~~---~~a~~iTPVPGGVGp~T~amLl~N~v 358 (368)
+|+|+++|++|--.+-+. +.. .-..|++- =||-..+ .. --.-.+||=-||.-.-+..-+...++
T Consensus 223 mk~ga~lIN~aRG~vVde-~AL~~AL~~g~i~gAaLDVf~~EP~~~~~pl~~~~~pnvilTPHia~~t~e~~~~~~~~~~ 301 (317)
T PRK06487 223 MKPGALLINTARGGLVDE-QALADALRSGHLGGAATDVLSVEPPVNGNPLLAPDIPRLIVTPHSAWGSREARQRIVGQLA 301 (317)
T ss_pred CCCCeEEEECCCccccCH-HHHHHHHHcCCeeEEEeecCCCCCCCCCCchhhcCCCCEEECCccccCCHHHHHHHHHHHH
Confidence 689999999997654310 000 00123432 3442111 10 01235788777776655555555555
Q ss_pred HHHHHHh
Q 017679 359 DSAKRAY 365 (368)
Q Consensus 359 ~a~~~~~ 365 (368)
+..++++
T Consensus 302 ~ni~~~~ 308 (317)
T PRK06487 302 ENARAFF 308 (317)
T ss_pred HHHHHHH
Confidence 5554443
No 89
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.88 E-value=2.9e-05 Score=76.64 Aligned_cols=80 Identities=29% Similarity=0.351 Sum_probs=67.1
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------CCHhhhccCCCEEEEecCC----CCcccCC--
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------KNPEQITSEADIVIAAAGV----ANLVRGS-- 292 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------~~L~~~~~~ADIVIsAvG~----p~~I~~e-- 292 (368)
.++.||++.|||.|.+ |+.+|.+|..-|++|..+++.. .++.+.+++||+|+..++. -++|..+
T Consensus 141 ~~L~gktvGIiG~G~I-G~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~ 219 (311)
T PRK08410 141 GEIKGKKWGIIGLGTI-GKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKEL 219 (311)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHH
Confidence 4689999999999997 9999999999999999887642 2678999999999988872 2467655
Q ss_pred -CcCCCcEEEEeecCCC
Q 017679 293 -WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 293 -~ik~gavVIDvg~n~~ 308 (368)
.+|+|+++|.+|--.+
T Consensus 220 ~~Mk~~a~lIN~aRG~v 236 (311)
T PRK08410 220 KLLKDGAILINVGRGGI 236 (311)
T ss_pred HhCCCCeEEEECCCccc
Confidence 5699999999997665
No 90
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.87 E-value=3.5e-05 Score=76.41 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=62.8
Q ss_pred ccceEEEEccCccchHHHHHHHh-hCC-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQ-RHH-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~-~~g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
..++++|||+|+. |+..+..|. .++ .+|++++|+. .++++.+++|||||++|+.+.
T Consensus 128 ~~~~v~iiGaG~q-A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~ 206 (326)
T TIGR02992 128 DSSVVAIFGAGMQ-ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSET 206 (326)
T ss_pred CCcEEEEECCCHH-HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCC
Confidence 5789999999997 999998886 466 4799998762 245667899999999999776
Q ss_pred c-ccCCCcCCCcEEEEeecC
Q 017679 288 L-VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 288 ~-I~~e~ik~gavVIDvg~n 306 (368)
. ++.+|+++|+.|.++|.+
T Consensus 207 p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 207 PILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cEecHHHcCCCcEEEeeCCC
Confidence 5 789999999999999965
No 91
>PRK08605 D-lactate dehydrogenase; Validated
Probab=97.85 E-value=3.8e-05 Score=76.44 Aligned_cols=81 Identities=22% Similarity=0.291 Sum_probs=64.9
Q ss_pred CCCCccceEEEEccCccchHHHHHHH-hhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCC----CCccc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLL-QRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGV----ANLVR 290 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL-~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~----p~~I~ 290 (368)
+.++.|++|.|||.|.+ |+.+|..| ...|++|...+++. .++.+.+++||+|+.+++. .+++.
T Consensus 141 ~~~l~g~~VgIIG~G~I-G~~vA~~L~~~~g~~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~ 219 (332)
T PRK08605 141 SRSIKDLKVAVIGTGRI-GLAVAKIFAKGYGSDVVAYDPFPNAKAATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFN 219 (332)
T ss_pred cceeCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCccHhHHhhccccCCHHHHHHhCCEEEEeCCCCcchhhhcC
Confidence 34689999999999986 99999999 56788998887532 3688899999999999874 23454
Q ss_pred C---CCcCCCcEEEEeecCCC
Q 017679 291 G---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 291 ~---e~ik~gavVIDvg~n~~ 308 (368)
. +.+|+|+++||++.-..
T Consensus 220 ~~~l~~mk~gailIN~sRG~~ 240 (332)
T PRK08605 220 ADLFKHFKKGAVFVNCARGSL 240 (332)
T ss_pred HHHHhcCCCCcEEEECCCCcc
Confidence 3 46799999999997654
No 92
>PRK07574 formate dehydrogenase; Provisional
Probab=97.84 E-value=2.2e-05 Score=79.82 Aligned_cols=135 Identities=15% Similarity=0.183 Sum_probs=90.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV-A---NLV 289 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~-p---~~I 289 (368)
.++.||+|.|||.|.+ |+.+|..|...|++|..++++. .++++.+++||+|+..++. + +++
T Consensus 188 ~~L~gktVGIvG~G~I-G~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 266 (385)
T PRK07574 188 YDLEGMTVGIVGAGRI-GLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF 266 (385)
T ss_pred eecCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh
Confidence 4689999999999987 9999999999999999988652 3577889999999999873 2 356
Q ss_pred cCC---CcCCCcEEEEeecCCCCCCC---CCCCCCCcE---EEcccchhhhh--c------cceEeccCCCcccHHHHHH
Q 017679 290 RGS---WLKPGAVVLDVGTCPVDVSV---DPSCEYGYR---LMGDVCYEEAM--R------LASVITPVPGGVGPMTVAM 352 (368)
Q Consensus 290 ~~e---~ik~gavVIDvg~n~~~~~~---d~t~~~~~k---l~GDVd~~~~~--~------~a~~iTPVPGGVGp~T~am 352 (368)
..+ .+|+|+++|+++.-.+-+.. +.. ..|+ ...||=+.+=. + -.-.+||=-+|.-.=+..-
T Consensus 267 ~~~~l~~mk~ga~lIN~aRG~iVDe~AL~~AL--~sG~i~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~T~e~~~~ 344 (385)
T PRK07574 267 DADVLSRMKRGSYLVNTARGKIVDRDAVVRAL--ESGHLAGYAGDVWFPQPAPADHPWRTMPRNGMTPHISGTTLSAQAR 344 (385)
T ss_pred CHHHHhcCCCCcEEEECCCCchhhHHHHHHHH--HhCCccEEEEecCCCCCCCCCChHHhCCCeEECCccccCcHHHHHH
Confidence 554 46999999999976543100 000 0123 34677433210 0 1336888778766555544
Q ss_pred HHHHHHHHHHHHh
Q 017679 353 LLSNTLDSAKRAY 365 (368)
Q Consensus 353 Ll~N~v~a~~~~~ 365 (368)
+...+++..++++
T Consensus 345 ~~~~~~~ni~~~~ 357 (385)
T PRK07574 345 YAAGTREILECFF 357 (385)
T ss_pred HHHHHHHHHHHHH
Confidence 4444555444443
No 93
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.84 E-value=3.5e-05 Score=76.17 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC-C---CcccC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLVRG 291 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~-p---~~I~~ 291 (368)
.+++||+|.|||.|.+ |+.+|..|...|++|+.++++. .++.+.+++||+|+...+. + ++|..
T Consensus 132 ~~l~g~tvgIvG~G~I-G~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~ 210 (312)
T PRK15469 132 YHREDFTIGILGAGVL-GSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIINQ 210 (312)
T ss_pred CCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhHH
Confidence 4689999999999987 9999999999999998887542 2578889999999998873 2 24554
Q ss_pred ---CCcCCCcEEEEeecCCC
Q 017679 292 ---SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 292 ---e~ik~gavVIDvg~n~~ 308 (368)
+.+|+|+++|++|--.+
T Consensus 211 ~~l~~mk~ga~lIN~aRG~v 230 (312)
T PRK15469 211 QLLEQLPDGAYLLNLARGVH 230 (312)
T ss_pred HHHhcCCCCcEEEECCCccc
Confidence 35689999999997654
No 94
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.83 E-value=3.1e-05 Score=77.15 Aligned_cols=80 Identities=20% Similarity=0.317 Sum_probs=65.8
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCCC----CcccC--
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGVA----NLVRG-- 291 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~p----~~I~~-- 291 (368)
.++.|++|.|||.|.+ |+++|.+|...|++|+.++++. .++.+.+++||+|+.+++.. +++..
T Consensus 142 ~~l~g~~VgIIG~G~I-G~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~ 220 (330)
T PRK12480 142 KPVKNMTVAIIGTGRI-GAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFDKAM 220 (330)
T ss_pred cccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHH
Confidence 4689999999999986 9999999999999999988642 36788899999999999853 23443
Q ss_pred -CCcCCCcEEEEeecCCC
Q 017679 292 -SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 292 -e~ik~gavVIDvg~n~~ 308 (368)
..+++|+++|++|--.+
T Consensus 221 l~~mk~gavlIN~aRG~~ 238 (330)
T PRK12480 221 FDHVKKGAILVNAARGAV 238 (330)
T ss_pred HhcCCCCcEEEEcCCccc
Confidence 34689999999997654
No 95
>KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism]
Probab=97.82 E-value=3.8e-05 Score=75.62 Aligned_cols=85 Identities=26% Similarity=0.393 Sum_probs=72.3
Q ss_pred HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCccc
Q 017679 224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANLVR 290 (368)
Q Consensus 224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~I~ 290 (368)
+...+-+.||.+||.|.|.+ |+..|..|...|+.|+|..-.. -.+++.++++||+|++||..+.|.
T Consensus 206 raTDvM~aGKv~Vv~GYGdV-GKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc~dii~ 284 (434)
T KOG1370|consen 206 RATDVMIAGKVAVVCGYGDV-GKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGCKDIIT 284 (434)
T ss_pred hhhhheecccEEEEeccCcc-chhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCCcchhh
Confidence 34567789999999999985 9999999999999999986543 247799999999999999999988
Q ss_pred CCCc---CCCcEEEEeecCCCC
Q 017679 291 GSWL---KPGAVVLDVGTCPVD 309 (368)
Q Consensus 291 ~e~i---k~gavVIDvg~n~~~ 309 (368)
.+++ |.+++|.++|+.-.|
T Consensus 285 ~~H~~~mk~d~IvCN~Ghfd~E 306 (434)
T KOG1370|consen 285 GEHFDQMKNDAIVCNIGHFDTE 306 (434)
T ss_pred HHHHHhCcCCcEEeccccccce
Confidence 7765 779999999987544
No 96
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=97.81 E-value=4e-05 Score=76.28 Aligned_cols=138 Identities=22% Similarity=0.285 Sum_probs=92.0
Q ss_pred hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CCc
Q 017679 226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANL 288 (368)
Q Consensus 226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~~ 288 (368)
.+.++.||++-|||.|.+ |+.++..|...|++|..+++.. .+|.+.+++||||+.-++. -++
T Consensus 136 ~g~el~gkTvGIiG~G~I-G~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~ 214 (324)
T COG0111 136 RGTELAGKTVGIIGLGRI-GRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGL 214 (324)
T ss_pred ccccccCCEEEEECCCHH-HHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcc
Confidence 356889999999999997 9999999999999999998743 3588999999999988873 346
Q ss_pred ccCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEEEc---ccchhh-------hhc-cceEeccCCCcccHHHHHH
Q 017679 289 VRGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRLMG---DVCYEE-------AMR-LASVITPVPGGVGPMTVAM 352 (368)
Q Consensus 289 I~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl~G---DVd~~~-------~~~-~a~~iTPVPGGVGp~T~am 352 (368)
|+.+ .+|+|+++|.++--.+-+. +.. .-+.|++-| ||-.++ ..+ -.-.+||=-||.---+...
T Consensus 215 i~~~~~a~MK~gailIN~aRG~vVde-~aL~~AL~~G~i~gA~lDVf~~EPl~~~~pL~~~pnV~~TPHia~~T~ea~~~ 293 (324)
T COG0111 215 INAEELAKMKPGAILINAARGGVVDE-DALLAALDSGKIAGAALDVFEEEPLPADSPLWDLPNVILTPHIGGSTDEAQER 293 (324)
T ss_pred cCHHHHhhCCCCeEEEECCCcceecH-HHHHHHHHcCCcceEEecCCCCCCCCCCChhhcCCCeEECCcccccCHHHHHH
Confidence 7655 4689999999987654210 000 000123221 332222 001 1235688888887655555
Q ss_pred HHHHHHHHHHHHh
Q 017679 353 LLSNTLDSAKRAY 365 (368)
Q Consensus 353 Ll~N~v~a~~~~~ 365 (368)
+...+++...+++
T Consensus 294 ~~~~~~~~i~~~l 306 (324)
T COG0111 294 VAEIVAENIVRYL 306 (324)
T ss_pred HHHHHHHHHHHHH
Confidence 6555555555443
No 97
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.76 E-value=5e-05 Score=75.43 Aligned_cols=136 Identities=17% Similarity=0.176 Sum_probs=89.7
Q ss_pred CCCCccceEEEEccCccchHHHHHHHh-hCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCC-C---Ccc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHALT------------KNPEQITSEADIVIAAAGV-A---NLV 289 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~-p---~~I 289 (368)
+.+|.||++.|||.|.+ |+.+|..|. ..|++|...++.. .++.+.+++||+|+..++. | ++|
T Consensus 140 g~~L~gktvGIiG~G~I-G~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li 218 (323)
T PRK15409 140 GTDVHHKTLGIVGMGRI-GMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLF 218 (323)
T ss_pred cCCCCCCEEEEEcccHH-HHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhcc
Confidence 45799999999999997 999999997 8899998776542 2578899999999988873 3 467
Q ss_pred cCC---CcCCCcEEEEeecCCCCCCC---CCCCCCCcEEEc---ccchhhh--------hccceEeccCCCcccHHHHHH
Q 017679 290 RGS---WLKPGAVVLDVGTCPVDVSV---DPSCEYGYRLMG---DVCYEEA--------MRLASVITPVPGGVGPMTVAM 352 (368)
Q Consensus 290 ~~e---~ik~gavVIDvg~n~~~~~~---d~t~~~~~kl~G---DVd~~~~--------~~~a~~iTPVPGGVGp~T~am 352 (368)
..+ .+|+|+++|+++--.+-+.. +.. ..|++.| ||-..+= .-..-.+||=-||.-.=+..-
T Consensus 219 ~~~~l~~mk~ga~lIN~aRG~vVde~AL~~AL--~~g~i~gAaLDVf~~EP~~~~~pL~~~~nvilTPHia~~t~e~~~~ 296 (323)
T PRK15409 219 GAEQFAKMKSSAIFINAGRGPVVDENALIAAL--QKGEIHAAGLDVFEQEPLSVDSPLLSLPNVVAVPHIGSATHETRYN 296 (323)
T ss_pred CHHHHhcCCCCeEEEECCCccccCHHHHHHHH--HcCCeeEEEeecCCCCCCCCCchhhcCCCEEEcCcCCCCcHHHHHH
Confidence 654 56899999999976543100 000 1234543 5532220 011336788778765444444
Q ss_pred HHHHHHHHHHHHh
Q 017679 353 LLSNTLDSAKRAY 365 (368)
Q Consensus 353 Ll~N~v~a~~~~~ 365 (368)
+...+++...+++
T Consensus 297 ~~~~~~~ni~~~~ 309 (323)
T PRK15409 297 MAACAVDNLIDAL 309 (323)
T ss_pred HHHHHHHHHHHHH
Confidence 4555555544443
No 98
>PLN02306 hydroxypyruvate reductase
Probab=97.75 E-value=5.2e-05 Score=77.14 Aligned_cols=81 Identities=21% Similarity=0.320 Sum_probs=65.1
Q ss_pred CCCCccceEEEEccCccchHHHHHHHh-hCCCEEEEEeCC----------------------------CCCHhhhccCCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQ-RHHATVSIVHAL----------------------------TKNPEQITSEAD 277 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~-~~gAtVti~h~~----------------------------t~~L~~~~~~AD 277 (368)
+.++.||++.|||.|.+ |+.+|.+|. ..|++|..++++ ..+|.+.+++||
T Consensus 160 g~~L~gktvGIiG~G~I-G~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sD 238 (386)
T PLN02306 160 GNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREAD 238 (386)
T ss_pred CcCCCCCEEEEECCCHH-HHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCC
Confidence 34689999999999997 999999985 889999877642 136888999999
Q ss_pred EEEEecCC----CCcccCC---CcCCCcEEEEeecCCC
Q 017679 278 IVIAAAGV----ANLVRGS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 278 IVIsAvG~----p~~I~~e---~ik~gavVIDvg~n~~ 308 (368)
||+..++. .++|+.+ ++|+|+++|++|--.+
T Consensus 239 iV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l 276 (386)
T PLN02306 239 VISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV 276 (386)
T ss_pred EEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc
Confidence 99988762 3467655 5699999999996554
No 99
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.74 E-value=0.00011 Score=72.98 Aligned_cols=89 Identities=18% Similarity=0.254 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC---------------------CCHhh
Q 017679 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT---------------------KNPEQ 271 (368)
Q Consensus 215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t---------------------~~L~~ 271 (368)
.+.+++....-. ....++++|||+|+. |+..+..|.. ++ .+|++++|+. .++++
T Consensus 117 ~a~~~~a~~~la--~~~~~~v~IiGaG~~-a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~ 193 (330)
T PRK08291 117 AAAGAVAARHLA--REDASRAAVIGAGEQ-ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHE 193 (330)
T ss_pred HHHHHHHHHHhC--CCCCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHH
Confidence 336666655321 345689999999997 9998777774 55 4799998762 34567
Q ss_pred hccCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679 272 ITSEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 272 ~~~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n 306 (368)
.+++|||||+||+.... ++.+|+++|+.|+.+|.+
T Consensus 194 al~~aDiVi~aT~s~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 194 AVAGADIIVTTTPSEEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred HHccCCEEEEeeCCCCcEecHHHcCCCceEEeeCCC
Confidence 78999999999997665 789999999999999875
No 100
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.72 E-value=2.7e-05 Score=69.81 Aligned_cols=77 Identities=26% Similarity=0.354 Sum_probs=56.8
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------------CCH
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------------KNP 269 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------------~~L 269 (368)
+..++|+|+|.|. ||+..+.+|...|++|++.+... ..+
T Consensus 18 ~~p~~vvv~G~G~-vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 18 VPPAKVVVTGAGR-VGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp E-T-EEEEESTSH-HHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCCeEEEEECCCH-HHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 5678999999887 59999999999999999997531 135
Q ss_pred hhhccCCCEEEEec-----CCCCcccCCCc---CCCcEEEEeecCC
Q 017679 270 EQITSEADIVIAAA-----GVANLVRGSWL---KPGAVVLDVGTCP 307 (368)
Q Consensus 270 ~~~~~~ADIVIsAv-----G~p~~I~~e~i---k~gavVIDvg~n~ 307 (368)
.+.++.+|+||++. ..|.+|+.+++ ++|.+|+|+....
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 57889999999655 24778988875 7899999998753
No 101
>PLN03139 formate dehydrogenase; Provisional
Probab=97.66 E-value=8.8e-05 Score=75.52 Aligned_cols=136 Identities=15% Similarity=0.213 Sum_probs=90.6
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCC----Ccc
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVA----NLV 289 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p----~~I 289 (368)
.++.||+|.|||.|.+ |+.++..|...|++|..+++.. .++.+.++++|+|+..++.. ++|
T Consensus 195 ~~L~gktVGIVG~G~I-G~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li 273 (386)
T PLN03139 195 YDLEGKTVGTVGAGRI-GRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMF 273 (386)
T ss_pred cCCCCCEEEEEeecHH-HHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHh
Confidence 4799999999999986 9999999999999998887541 26788999999999988732 246
Q ss_pred cCC---CcCCCcEEEEeecCCCCCCCCCC--CCCCcEE---Ecccchhhhhc--------cceEeccCCCcccHHHHHHH
Q 017679 290 RGS---WLKPGAVVLDVGTCPVDVSVDPS--CEYGYRL---MGDVCYEEAMR--------LASVITPVPGGVGPMTVAML 353 (368)
Q Consensus 290 ~~e---~ik~gavVIDvg~n~~~~~~d~t--~~~~~kl---~GDVd~~~~~~--------~a~~iTPVPGGVGp~T~amL 353 (368)
+.+ .+|+|+++|+++--.+-+. +.. .-..|++ ..||=+.+=.. -.-.+||=-||.-.-+..-+
T Consensus 274 ~~~~l~~mk~ga~lIN~aRG~iVDe-~AL~~AL~sG~l~GAaLDV~~~EPlp~d~pL~~~pNvilTPHiag~t~~~~~r~ 352 (386)
T PLN03139 274 NKERIAKMKKGVLIVNNARGAIMDT-QAVADACSSGHIGGYGGDVWYPQPAPKDHPWRYMPNHAMTPHISGTTIDAQLRY 352 (386)
T ss_pred CHHHHhhCCCCeEEEECCCCchhhH-HHHHHHHHcCCceEEEEcCCCCCCCCCCChhhcCCCeEEcccccccCHHHHHHH
Confidence 554 4689999999997654310 000 0012333 46775433111 13467887777655444444
Q ss_pred HHHHHHHHHHHh
Q 017679 354 LSNTLDSAKRAY 365 (368)
Q Consensus 354 l~N~v~a~~~~~ 365 (368)
...+++..++|+
T Consensus 353 ~~~~~~nl~~~~ 364 (386)
T PLN03139 353 AAGVKDMLDRYF 364 (386)
T ss_pred HHHHHHHHHHHH
Confidence 444555444444
No 102
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.65 E-value=8.5e-05 Score=76.07 Aligned_cols=81 Identities=22% Similarity=0.367 Sum_probs=67.0
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------CCHhhhccCCCEEEEecCC----CCcccCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------KNPEQITSEADIVIAAAGV----ANLVRGS 292 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------~~L~~~~~~ADIVIsAvG~----p~~I~~e 292 (368)
+.+|.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+..++. -++|..+
T Consensus 146 ~~~L~gktvGIiG~G~I-G~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~ 224 (409)
T PRK11790 146 SFEVRGKTLGIVGYGHI-GTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAE 224 (409)
T ss_pred cccCCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHH
Confidence 35799999999999997 9999999999999999887542 2688999999999988873 2367654
Q ss_pred ---CcCCCcEEEEeecCCC
Q 017679 293 ---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 293 ---~ik~gavVIDvg~n~~ 308 (368)
.+|+|+++|+++--.+
T Consensus 225 ~l~~mk~ga~lIN~aRG~~ 243 (409)
T PRK11790 225 ELALMKPGAILINASRGTV 243 (409)
T ss_pred HHhcCCCCeEEEECCCCcc
Confidence 5689999999995543
No 103
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.64 E-value=7.8e-05 Score=66.71 Aligned_cols=59 Identities=22% Similarity=0.253 Sum_probs=47.1
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH--------------hhhccCCCEEEEecCCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP--------------EQITSEADIVIAAAGVAN 287 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L--------------~~~~~~ADIVIsAvG~p~ 287 (368)
++++||+|+|||.|.+ |.-.+..|++.|++|+++...- +++ ++.+.+||+||.||+.+.
T Consensus 9 l~l~~~~vlVvGGG~v-a~rka~~Ll~~ga~V~VIsp~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e 82 (157)
T PRK06719 9 FNLHNKVVVIIGGGKI-AYRKASGLKDTGAFVTVVSPEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA 82 (157)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH
Confidence 6899999999998875 9999999999999999985331 111 123688999999998765
No 104
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.63 E-value=0.00011 Score=77.58 Aligned_cols=81 Identities=19% Similarity=0.309 Sum_probs=66.9
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCC----CCcc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGV----ANLV 289 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~----p~~I 289 (368)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+..++. -++|
T Consensus 133 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li 211 (525)
T TIGR01327 133 GTELYGKTLGVIGLGRI-GSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLI 211 (525)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCc
Confidence 45799999999999987 9999999999999999987631 3688999999999998873 2356
Q ss_pred cCC---CcCCCcEEEEeecCCC
Q 017679 290 RGS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 290 ~~e---~ik~gavVIDvg~n~~ 308 (368)
..+ .+|+|+++||++.-.+
T Consensus 212 ~~~~l~~mk~ga~lIN~aRG~~ 233 (525)
T TIGR01327 212 GAEELAKMKKGVIIVNCARGGI 233 (525)
T ss_pred CHHHHhcCCCCeEEEEcCCCce
Confidence 443 5689999999997665
No 105
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.61 E-value=0.00026 Score=70.14 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=61.1
Q ss_pred ccceEEEEccCccchHHHHHHHh-hCCC-EEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQ-RHHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~-~~gA-tVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
..++++|||.|+. |+..+..++ .++. +|++++++. .++++.+++||+||++|+.++
T Consensus 126 ~~~~v~iiGaG~~-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~ 204 (325)
T PRK08618 126 DAKTLCLIGTGGQ-AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKT 204 (325)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCC
Confidence 5789999999997 988876664 4564 799988752 245677899999999999887
Q ss_pred c-ccCCCcCCCcEEEEeecCC
Q 017679 288 L-VRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 ~-I~~e~ik~gavVIDvg~n~ 307 (368)
. +. +|+++|+.|+-+|.+.
T Consensus 205 p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 205 PVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred cchH-HhcCCCcEEEecCCCC
Confidence 6 68 9999999999999753
No 106
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.60 E-value=8.5e-05 Score=66.14 Aligned_cols=74 Identities=22% Similarity=0.350 Sum_probs=55.4
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-c---
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R--- 290 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~--- 290 (368)
++|-+||-|.. |.+++..|.+.|.+|++++++. .++.+.++++|+||+++..+. .+ .
T Consensus 2 ~~Ig~IGlG~m-G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGLGNM-GSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE--SHH-HHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEchHHH-HHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 58999999986 9999999999999999999873 467788999999999998643 12 3
Q ss_pred CCCcCCCcEEEEeecCC
Q 017679 291 GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 291 ~e~ik~gavVIDvg~n~ 307 (368)
...+++|.++||+++..
T Consensus 81 ~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 81 LAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp GGGS-TTEEEEE-SS--
T ss_pred hhccccceEEEecCCcc
Confidence 24567899999999754
No 107
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.58 E-value=0.00028 Score=69.67 Aligned_cols=77 Identities=25% Similarity=0.317 Sum_probs=59.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p 286 (368)
....+++.|||.|.. |++.+..+.. ++ .+|++++|+. .++++.+++|||||++|+.+
T Consensus 122 ~~~~~~v~iiG~G~~-a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 122 RKDASRLLVVGTGRL-ASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CCCCceEEEECCcHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 457899999999986 9999875543 44 6899998752 23556788999999999987
Q ss_pred Cc-ccCCCcCCCcEEEEeecC
Q 017679 287 NL-VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 287 ~~-I~~e~ik~gavVIDvg~n 306 (368)
.. ++.+|+++|+.|.=+|.+
T Consensus 201 ~pvl~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 201 EPLVRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred CCEecHHHcCCCCEEEeeCCC
Confidence 76 788999999954445543
No 108
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.57 E-value=0.00014 Score=76.62 Aligned_cols=81 Identities=20% Similarity=0.333 Sum_probs=66.8
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecCCC----Cccc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAGVA----NLVR 290 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG~p----~~I~ 290 (368)
+.++.||++.|||.|.+ |+.+|..|...|++|..++++. .++.+.+++||+|+.+++.. +++.
T Consensus 135 g~~l~gktvgIiG~G~I-G~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~ 213 (526)
T PRK13581 135 GVELYGKTLGIIGLGRI-GSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIG 213 (526)
T ss_pred ccccCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcC
Confidence 35689999999999987 9999999999999999987632 15778899999999998843 4565
Q ss_pred CC---CcCCCcEEEEeecCCC
Q 017679 291 GS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 291 ~e---~ik~gavVIDvg~n~~ 308 (368)
.+ .+|+|+++|+++.-.+
T Consensus 214 ~~~l~~mk~ga~lIN~aRG~~ 234 (526)
T PRK13581 214 AEELAKMKPGVRIINCARGGI 234 (526)
T ss_pred HHHHhcCCCCeEEEECCCCce
Confidence 43 5689999999997654
No 109
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.52 E-value=0.00053 Score=67.48 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=63.2
Q ss_pred CCCccceEEEEccCccchHHHHHHHhh-CCC-EEEEEeCCC-------------------CCHhhhccCCCEEEEecCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT-------------------KNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~-~gA-tVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p 286 (368)
-....++++|||.|.. |+..+..+.. ++. +|.+++++. .++++.+++|||||++|+.+
T Consensus 121 a~~~~~~v~IiGaG~q-a~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~ 199 (304)
T PRK07340 121 APAPPGDLLLIGTGVQ-ARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSR 199 (304)
T ss_pred CCCCCCEEEEECCcHH-HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCC
Confidence 3457899999999987 9999988864 554 799998752 24667889999999999988
Q ss_pred Cc-ccCCCcCCCcEEEEeecCC
Q 017679 287 NL-VRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 287 ~~-I~~e~ik~gavVIDvg~n~ 307 (368)
+. +.. |+|||+.|.=+|.+.
T Consensus 200 ~Pl~~~-~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 200 TPVYPE-AARAGRLVVAVGAFT 220 (304)
T ss_pred CceeCc-cCCCCCEEEecCCCC
Confidence 76 565 899999999999653
No 110
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.52 E-value=0.00011 Score=60.97 Aligned_cols=60 Identities=25% Similarity=0.372 Sum_probs=46.0
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCCCCc
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVANL 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~p~~ 288 (368)
++++||+|+|||.|.. |..-+..|++.||+||++.... ..+++.+..+|+||.|++.+.+
T Consensus 3 l~l~~~~vlVvGgG~v-a~~k~~~Ll~~gA~v~vis~~~~~~~~~i~~~~~~~~~~l~~~~lV~~at~d~~~ 73 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPV-AARKARLLLEAGAKVTVISPEIEFSEGLIQLIRREFEEDLDGADLVFAATDDPEL 73 (103)
T ss_dssp E--TT-EEEEEEESHH-HHHHHHHHCCCTBEEEEEESSEHHHHTSCEEEESS-GGGCTTESEEEE-SS-HHH
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEECCchhhhhhHHHHHhhhHHHHHhhheEEEecCCCHHH
Confidence 4789999999998875 9999999999999999998762 3456778899999999987653
No 111
>PF08501 Shikimate_dh_N: Shikimate dehydrogenase substrate binding domain; InterPro: IPR013708 This domain is the substrate binding domain of shikimate dehydrogenase []. Shikimate dehydrogenase catalyses the fourth step of the mycobacterial Shikimate pathway, which results in the biosynthesis of chorismate. Chorismate is a precursor of aromatic amino acids, naphthoquinones, menaquinones and mycobactins [, ]. This pathway is an important target for antibacterial agents, especially against Mycobacterium tuberculosis, since it does not occur in mammals.; GO: 0004764 shikimate 3-dehydrogenase (NADP+) activity, 0055114 oxidation-reduction process; PDB: 3U62_A 2EGG_A 1P74_B 1P77_A 3O8Q_A 3TNL_C 3TOZ_G 1NYT_C 1VI2_B 1NPD_A ....
Probab=97.52 E-value=0.00011 Score=58.94 Aligned_cols=68 Identities=13% Similarity=0.236 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCc-ccccCccCcce
Q 017679 123 RNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSL-EKDVDGFHPLN 198 (368)
Q Consensus 123 ~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p-~KDVDgl~~~N 198 (368)
.++++.++++|++..|..++. .++++.+.++.+.. +++.|++|++|++ +++++.+|. +..+.-+..+|
T Consensus 13 ~~hn~~f~~~g~~~~Y~~~~v--~~~~l~~~~~~~~~-~~~~G~~VT~P~K-----~~~~~~~D~~~~~A~~igAvN 81 (83)
T PF08501_consen 13 LIHNAAFEALGLDAVYIPFEV--EPEDLEDFLDALRA-PNFRGLNVTMPHK-----EAAIPYLDELSPSAKAIGAVN 81 (83)
T ss_dssp HHHHHHHHHTTSSEEEEEEET--STTCHHHHHHHHHH-TTESEEEE-TTST-----THHGGGSSEE-HHHHHHTS-S
T ss_pred HHHHHHHHHcCCCcEEEEeec--CHHHHHHHHHHHhc-CCCCeeeecchHH-----HHHHHHhccCCHHHHHhCCcc
Confidence 478999999999999999855 56678888888887 7899999999999 456666654 33333334444
No 112
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.48 E-value=0.0002 Score=71.40 Aligned_cols=81 Identities=21% Similarity=0.356 Sum_probs=67.3
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecC-C---CCccc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-V---ANLVR 290 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG-~---p~~I~ 290 (368)
+.++.||++-|||.|.+ |+.+|+.|..-|++|...+++. -++.+.+++||+|+...+ . -|+|.
T Consensus 141 ~~~l~gktvGIiG~GrI-G~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin 219 (324)
T COG1052 141 GFDLRGKTLGIIGLGRI-GQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLIN 219 (324)
T ss_pred ccCCCCCEEEEECCCHH-HHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcC
Confidence 35789999999999997 9999999998899999888663 137799999999998887 2 34676
Q ss_pred CC---CcCCCcEEEEeecCCC
Q 017679 291 GS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 291 ~e---~ik~gavVIDvg~n~~ 308 (368)
.+ .+|+|+++|.+|--.+
T Consensus 220 ~~~l~~mk~ga~lVNtaRG~~ 240 (324)
T COG1052 220 AEELAKMKPGAILVNTARGGL 240 (324)
T ss_pred HHHHHhCCCCeEEEECCCccc
Confidence 65 5689999999997654
No 113
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.47 E-value=0.0003 Score=74.05 Aligned_cols=90 Identities=23% Similarity=0.315 Sum_probs=67.2
Q ss_pred HHHHHHHHHhCC----------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------
Q 017679 217 KGCIELLIRSGV----------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------- 267 (368)
Q Consensus 217 ~gv~~lL~~~~i----------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------- 267 (368)
.|+++..++++. ...|.+|+|+|+|.+ |...+..+...||.|+++..+..
T Consensus 140 ~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGaG~i-GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e 218 (509)
T PRK09424 140 RAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGAGVA-GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEE 218 (509)
T ss_pred HHHHHHHHHhcccCCCceeccCCcCCCEEEEECCcHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEecccc
Confidence 677777776653 346999999999876 99999999999999888865410
Q ss_pred --------------C--------HhhhccCCCEEEEecCCCC-----cccCCC---cCCCcEEEEeecCC
Q 017679 268 --------------N--------PEQITSEADIVIAAAGVAN-----LVRGSW---LKPGAVVLDVGTCP 307 (368)
Q Consensus 268 --------------~--------L~~~~~~ADIVIsAvG~p~-----~I~~e~---ik~gavVIDvg~n~ 307 (368)
+ +.+.++.+|+||.++|.|. +++.++ +|+|.+|+|+|..+
T Consensus 219 ~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~ 288 (509)
T PRK09424 219 EGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAEN 288 (509)
T ss_pred ccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCC
Confidence 1 0122357999999999644 565554 58999999999853
No 114
>PRK12862 malic enzyme; Reviewed
Probab=97.38 E-value=0.00083 Score=73.90 Aligned_cols=172 Identities=13% Similarity=0.150 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcc
Q 017679 119 QTYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPL 197 (368)
Q Consensus 119 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~ 197 (368)
.--...|.-.++.+| |++.-+.+... +.+|+.+.++.+- |++-||++.= -+.-+--+|++.+..+-|+-.||.-
T Consensus 94 ~pv~egK~~l~~~~~gi~~~~i~~~~~-d~d~~v~~v~~~~--p~f~~i~~ED--~~~~~~f~i~~~~~~~~~ip~f~DD 168 (763)
T PRK12862 94 KPVMEGKAVLFKKFAGIDVFDIELDES-DPDKLVEIVAALE--PTFGGINLED--IKAPECFYIERELRERMKIPVFHDD 168 (763)
T ss_pred cchHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCcceeeeec--ccCchHHHHHHHHHhcCCCceEecC
Confidence 344456777676664 88666666543 7789999999887 7778877631 1112234455555544456655532
Q ss_pred eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC--------
Q 017679 198 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT-------- 266 (368)
Q Consensus 198 N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t-------- 266 (368)
. .|---.+..|++..++-.+.+++..++++.|+|.+ |..++.+|...|. ++++|+++-
T Consensus 169 ~----------~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 237 (763)
T PRK12862 169 Q----------HGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAA-ALACLDLLVSLGVKRENIWVTDIKGVVYEGRTE 237 (763)
T ss_pred c----------ccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHH-HHHHHHHHHHcCCCcccEEEEcCCCeeeCCCCc
Confidence 2 23223456889999999999999999999999988 9999999999997 688997540
Q ss_pred ---------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679 267 ---------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 308 (368)
Q Consensus 267 ---------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~ 308 (368)
.+|.+.++.+|++|-..+ |+.+++||++. .-+|+=++ ||.
T Consensus 238 ~l~~~~~~~a~~~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 295 (763)
T PRK12862 238 LMDPWKARYAQKTDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALA-NPT 295 (763)
T ss_pred cccHHHHHHhhhcccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCC-CCc
Confidence 358899999999998777 89999999864 67887776 543
No 115
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.38 E-value=0.00028 Score=71.89 Aligned_cols=110 Identities=22% Similarity=0.231 Sum_probs=76.8
Q ss_pred ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC------------------------CCHhhhccCCCEEEEecCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT------------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
++|+|||+|++ |+++|+.|++++ ..|++..|+- +.+.+.+++.|+||++.+...
T Consensus 2 ~~ilviGaG~V-g~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~ 80 (389)
T COG1748 2 MKILVIGAGGV-GSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFV 80 (389)
T ss_pred CcEEEECCchh-HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchh
Confidence 68999999885 999999999998 7999998762 246688999999999997544
Q ss_pred c--ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHHHHHHHHHHHH
Q 017679 288 L--VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMTVAMLLSNTLD 359 (368)
Q Consensus 288 ~--I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T~amLl~N~v~ 359 (368)
- +-...++-|.-++|+.+.... . -++++..++|| +|-++| |+-|=-+..+...+++
T Consensus 81 ~~~i~ka~i~~gv~yvDts~~~~~------------~---~~~~~~a~~Ag-it~v~~~G~dPGi~nv~a~~a~~ 139 (389)
T COG1748 81 DLTILKACIKTGVDYVDTSYYEEP------------P---WKLDEEAKKAG-ITAVLGCGFDPGITNVLAAYAAK 139 (389)
T ss_pred hHHHHHHHHHhCCCEEEcccCCch------------h---hhhhHHHHHcC-eEEEcccCcCcchHHHHHHHHHH
Confidence 2 334467789999999876521 0 12233335666 445655 5556555555554443
No 116
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=97.35 E-value=0.00034 Score=70.00 Aligned_cols=81 Identities=17% Similarity=0.341 Sum_probs=63.4
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhccCCCEEEEecCC----CCcc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITSEADIVIAAAGV----ANLV 289 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~~ADIVIsAvG~----p~~I 289 (368)
+.+++||+|.|+|.|.+ |+.+|..|..-|+.+.-+.|+.. ++.+.++++|+||.+..- -|+|
T Consensus 157 g~~~~gK~vgilG~G~I-G~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~li 235 (336)
T KOG0069|consen 157 GYDLEGKTVGILGLGRI-GKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLI 235 (336)
T ss_pred cccccCCEEEEecCcHH-HHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHh
Confidence 56789999999999998 99999999998854444444322 677889999999988862 2356
Q ss_pred cCC---CcCCCcEEEEeecCCC
Q 017679 290 RGS---WLKPGAVVLDVGTCPV 308 (368)
Q Consensus 290 ~~e---~ik~gavVIDvg~n~~ 308 (368)
.++ ++|+|+++|.++--.+
T Consensus 236 Nk~~~~~mk~g~vlVN~aRG~i 257 (336)
T KOG0069|consen 236 NKKFIEKMKDGAVLVNTARGAI 257 (336)
T ss_pred hHHHHHhcCCCeEEEecccccc
Confidence 554 6799999999986543
No 117
>PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed
Probab=97.30 E-value=0.0017 Score=71.22 Aligned_cols=172 Identities=15% Similarity=0.166 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcc
Q 017679 119 QTYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPL 197 (368)
Q Consensus 119 ~~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~ 197 (368)
.--...|.-.++.+| |++.-+.+... +.+|+.+.++.+- |.+-||++.== +.-+--+|++.+..+-|+-.||.-
T Consensus 86 ~pv~egK~~l~~~~~gid~~~i~~~~~-d~de~v~~v~~~~--p~~g~i~~ED~--~~p~~f~i~~~~~~~~~ip~f~DD 160 (752)
T PRK07232 86 KPVMEGKGVLFKKFAGIDVFDIEVDEE-DPDKFIEAVAALE--PTFGGINLEDI--KAPECFYIEEKLRERMDIPVFHDD 160 (752)
T ss_pred ccHHHHHHHHHHhhcCCCccccccCCC-CHHHHHHHHHHhC--CCccEEeeeec--CCchHHHHHHHHHHhcCCCeeccc
Confidence 444456777777765 88766666543 6789999998886 77888876411 112234455555444456665532
Q ss_pred eeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC--------
Q 017679 198 NIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT-------- 266 (368)
Q Consensus 198 N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t-------- 266 (368)
. .|---.+..|++..|+-.+.+++..++++.|+|-+ |..++.+|...|. .+++|+++-
T Consensus 161 ~----------~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaa-g~~~a~~l~~~G~~~~~i~~~D~~G~i~~~r~~ 229 (752)
T PRK07232 161 Q----------HGTAIISAAALLNALELVGKKIEDVKIVVSGAGAA-AIACLNLLVALGAKKENIIVCDSKGVIYKGRTE 229 (752)
T ss_pred c----------chHHHHHHHHHHHHHHHhCCChhhcEEEEECccHH-HHHHHHHHHHcCCCcccEEEEcCCCeecCCCcc
Confidence 2 22223455788999999999999999999999988 9999999999987 688987541
Q ss_pred ---------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679 267 ---------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 308 (368)
Q Consensus 267 ---------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~ 308 (368)
.+|.+.++.+|++|-..+ |+.+++||++. ..+|+=++ ||.
T Consensus 230 ~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifals-NP~ 287 (752)
T PRK07232 230 GMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALA-NPD 287 (752)
T ss_pred cccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecC-CCC
Confidence 358899999999997776 89999999854 67888777 543
No 118
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.30 E-value=0.00053 Score=67.15 Aligned_cols=73 Identities=14% Similarity=0.248 Sum_probs=59.3
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCHhhhccCCCEEEEecCCCCc---c---cCCCcCCCcEEEEe
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVANL---V---RGSWLKPGAVVLDV 303 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L~~~~~~ADIVIsAvG~p~~---I---~~e~ik~gavVIDv 303 (368)
++++|.|||.|.. |.+++..|.+.|.+|++.+|+. .++.+.+++||+||.+++.... + ....++++.+|||+
T Consensus 3 ~~m~I~iiG~G~~-G~~lA~~l~~~G~~V~~~~r~~~~~~~~~~~~advvi~~vp~~~~~~v~~~l~~~~~~~~~ivi~~ 81 (308)
T PRK14619 3 QPKTIAILGAGAW-GSTLAGLASANGHRVRVWSRRSGLSLAAVLADADVIVSAVSMKGVRPVAEQVQALNLPPETIIVTA 81 (308)
T ss_pred CCCEEEEECccHH-HHHHHHHHHHCCCEEEEEeCCCCCCHHHHHhcCCEEEEECChHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 5678999999886 9999999999999999998764 5788889999999999986432 2 12236778999997
Q ss_pred e
Q 017679 304 G 304 (368)
Q Consensus 304 g 304 (368)
.
T Consensus 82 s 82 (308)
T PRK14619 82 T 82 (308)
T ss_pred C
Confidence 5
No 119
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.29 E-value=0.00044 Score=69.94 Aligned_cols=75 Identities=17% Similarity=0.270 Sum_probs=59.0
Q ss_pred ccceEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCC-CCHhhhccCCCEEEEecCCCC---cccC-CCcCCCcEEEEee
Q 017679 231 MGKNAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALT-KNPEQITSEADIVIAAAGVAN---LVRG-SWLKPGAVVLDVG 304 (368)
Q Consensus 231 ~GK~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t-~~L~~~~~~ADIVIsAvG~p~---~I~~-e~ik~gavVIDvg 304 (368)
..++|+||| .|. +|..++..|.+.|.+|+++.+.. .+..+.+++||+||.|++... ++.. ..+++|++|+|+|
T Consensus 97 ~~~~I~IiGG~Gl-mG~slA~~l~~~G~~V~~~d~~~~~~~~~~~~~aDlVilavP~~~~~~~~~~l~~l~~~~iv~Dv~ 175 (374)
T PRK11199 97 DLRPVVIVGGKGQ-LGRLFAKMLTLSGYQVRILEQDDWDRAEDILADAGMVIVSVPIHLTEEVIARLPPLPEDCILVDLT 175 (374)
T ss_pred ccceEEEEcCCCh-hhHHHHHHHHHCCCeEEEeCCCcchhHHHHHhcCCEEEEeCcHHHHHHHHHHHhCCCCCcEEEECC
Confidence 347899999 665 59999999999999999998754 356677899999999998533 2211 1178999999999
Q ss_pred cC
Q 017679 305 TC 306 (368)
Q Consensus 305 ~n 306 (368)
..
T Consensus 176 Sv 177 (374)
T PRK11199 176 SV 177 (374)
T ss_pred Cc
Confidence 74
No 120
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.27 E-value=0.00051 Score=67.42 Aligned_cols=74 Identities=27% Similarity=0.385 Sum_probs=59.8
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc-----ccCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------KNPEQITSEADIVIAAAGVANL-----VRGS 292 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~-----I~~e 292 (368)
.+|..||-|.. |.|+|..|.+.|..|++.+++. .+..+.+++||+||+.++.+.- +..+
T Consensus 1 ~kIafIGLG~M-G~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~ 79 (286)
T COG2084 1 MKIAFIGLGIM-GSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN 79 (286)
T ss_pred CeEEEEcCchh-hHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence 37899999986 9999999999999999999873 2345788999999999986542 2223
Q ss_pred ----CcCCCcEEEEeecCC
Q 017679 293 ----WLKPGAVVLDVGTCP 307 (368)
Q Consensus 293 ----~ik~gavVIDvg~n~ 307 (368)
..++|.++||+.+..
T Consensus 80 g~~~~~~~G~i~IDmSTis 98 (286)
T COG2084 80 GLLEGLKPGAIVIDMSTIS 98 (286)
T ss_pred chhhcCCCCCEEEECCCCC
Confidence 457899999999763
No 121
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=97.24 E-value=0.0014 Score=67.08 Aligned_cols=174 Identities=17% Similarity=0.249 Sum_probs=126.0
Q ss_pred ccHHHHHHHHHHHHHc-CCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679 117 DSQTYVRNKIKACEEV-GIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195 (368)
Q Consensus 117 aS~~Yv~~k~k~a~~~-GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~ 195 (368)
++.--...|.-.++++ ||++.-+++... +.+|+.+.++.+. |.+-||+++-==.+ .-..+...+..+.|+--||
T Consensus 98 ag~pVmeGKa~Lfk~faGid~~pI~ld~~-~~~ei~~~Vkal~--p~FgginLedi~ap--~cf~ie~~lr~~~~IPvFh 172 (432)
T COG0281 98 AGKPVMEGKAVLFKAFAGIDVLPIELDVG-TNNEIIEFVKALE--PTFGGINLEDIDAP--RCFAIEERLRYRMNIPVFH 172 (432)
T ss_pred cCcchhhhHHHHHHHhcCCCceeeEeeCC-ChHHHHHHHHHhh--hcCCCcceeecccc--hhhHHHHHHhhcCCCCccc
Confidence 4444556677777665 688888888654 5678999999997 57999999742111 1134455566677888777
Q ss_pred cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC------
Q 017679 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------ 266 (368)
Q Consensus 196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t------ 266 (368)
.--.|- ---|..|++..|+-.|.+|+..++++.|+|-+ |-.++.+|...|. +|++|.|+-
T Consensus 173 DDqqGT----------aiv~lA~llnalk~~gk~l~d~kiv~~GAGAA-giaia~~l~~~g~~~~~i~~~D~~G~l~~~r 241 (432)
T COG0281 173 DDQQGT----------AIVTLAALLNALKLTGKKLKDQKIVINGAGAA-GIAIADLLVAAGVKEENIFVVDRKGLLYDGR 241 (432)
T ss_pred ccccHH----------HHHHHHHHHHHHHHhCCCccceEEEEeCCcHH-HHHHHHHHHHhCCCcccEEEEecCCcccCCC
Confidence 444321 12245788999999999999999999999988 9999999999996 699998751
Q ss_pred CCH-------------------hhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679 267 KNP-------------------EQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 308 (368)
Q Consensus 267 ~~L-------------------~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~ 308 (368)
.++ .+.+..||++|...|. +.+++||++. +.+|+=++ ||.
T Consensus 242 ~~~~~~~~k~~~a~~~~~~~~~~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfala-NP~ 303 (432)
T COG0281 242 EDLTMNQKKYAKAIEDTGERTLDLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALA-NPT 303 (432)
T ss_pred cccccchHHHHHHHhhhccccccccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecC-CCC
Confidence 010 2346789999988877 8899998864 56777666 443
No 122
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.15 E-value=0.0013 Score=61.42 Aligned_cols=113 Identities=21% Similarity=0.287 Sum_probs=70.6
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CH-----------------hhhccCCCEEEEecCCCCc-
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NP-----------------EQITSEADIVIAAAGVANL- 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L-----------------~~~~~~ADIVIsAvG~p~~- 288 (368)
++++||+|+|||.|.+ |.--+..|++.||.||++..... ++ .+.+..+|+||.|+|.+.+
T Consensus 5 l~l~gk~vlVvGgG~v-a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDV-ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDEELN 83 (205)
T ss_pred EEcCCCeEEEECcCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCHHHH
Confidence 5789999999998774 99999999999999999965431 11 2346789999999997642
Q ss_pred --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679 289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL 358 (368)
Q Consensus 289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v 358 (368)
+-.+.-+.|..| ++.-++.. +|+-|....+. .-+|+ -||-.|..+..|-+++-
T Consensus 84 ~~i~~~a~~~~ilv-n~~d~~e~--------------~~f~~pa~~~~g~l~iais--T~G~sP~la~~lr~~ie 141 (205)
T TIGR01470 84 RRVAHAARARGVPV-NVVDDPEL--------------CSFIFPSIVDRSPVVVAIS--SGGAAPVLARLLRERIE 141 (205)
T ss_pred HHHHHHHHHcCCEE-EECCCccc--------------CeEEEeeEEEcCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 222222335444 33322211 23333332221 12333 47888888777665543
No 123
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=97.12 E-value=0.061 Score=53.41 Aligned_cols=148 Identities=17% Similarity=0.170 Sum_probs=99.0
Q ss_pred cccHHHHHHHHHHHHHcCCeEEEEEcCCC-CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCcc
Q 017679 116 RDSQTYVRNKIKACEEVGIKSIVTEFADG-CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGF 194 (368)
Q Consensus 116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~-~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl 194 (368)
|...+- -.=..++.++|-++.++.-... ...+.+.+.++-|+. .+|+|.+-.| .|-....+.+. ..+
T Consensus 53 pSTRTR-~SFe~A~~~LGg~~i~l~~~~~~~~~~~~~dt~~vls~--~~D~iv~R~~--~~~~~~~~a~~-------~~v 120 (311)
T PRK14804 53 TSTRTR-VSFEVAMTEMGGHGIYLDWMASNFQLSDIDLEARYLSR--NVSVIMARLK--KHEDLLVMKNG-------SQV 120 (311)
T ss_pred CchhHH-HHHHHHHHHcCCeEEEeCCCccccccccHHHHHHHHHh--cCCEEEEeCC--ChHHHHHHHHH-------CCC
Confidence 434443 3567899999999887754322 222334444666665 6899999865 33332222222 123
Q ss_pred CcceeeeccccCCcCccccCCHHH-HHHHHHHhCC-CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------
Q 017679 195 HPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------- 265 (368)
Q Consensus 195 ~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i-~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~------- 265 (368)
-.+|.| ...+.||=+.+ ++.+.++.|- +++|++|++||.++-|.+.++.++...|++|++++-.
T Consensus 121 PVINag-------~~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~ 193 (311)
T PRK14804 121 PVINGC-------DNMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIH 193 (311)
T ss_pred CEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHH
Confidence 445653 12467998888 4455555553 6999999999998888999999999999999998742
Q ss_pred ---------------CCCHhhhccCCCEEEEe
Q 017679 266 ---------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 266 ---------------t~~L~~~~~~ADIVIsA 282 (368)
+.++++.++.||+|.+-
T Consensus 194 ~~~~~~~~~~g~i~~~~d~~~av~~aDvvy~d 225 (311)
T PRK14804 194 AQTVERAKKKGTLSWEMNLHKAVSHADYVYTD 225 (311)
T ss_pred HHHHHHHHhcCCeEEEeCHHHHhCCCCEEEee
Confidence 24567888999999873
No 124
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.08 E-value=0.00062 Score=63.94 Aligned_cols=116 Identities=22% Similarity=0.290 Sum_probs=72.1
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-C-----------------CHhhhccCCCEEEEecCCCCc-
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K-----------------NPEQITSEADIVIAAAGVANL- 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~-----------------~L~~~~~~ADIVIsAvG~p~~- 288 (368)
++++||+|+|||.|. ||.-=+.+|++.||+|+++.-.. + -..+.+..+++||.||+.+.+
T Consensus 8 ~~l~~k~VlvvGgG~-va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 8 LDLEGKKVLVVGGGS-VALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred EEcCCCEEEEECCCH-HHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCCCHHHH
Confidence 578999999999877 59999999999999999985432 1 112455669999999987653
Q ss_pred --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
|-...=+.+ +.+++.-.+. .+|+-|....++ .-+|+ -||-+|+.+.++.+..-...
T Consensus 87 ~~i~~~a~~~~-i~vNv~D~p~--------------~~~f~~Pa~~~r~~l~iaIs--T~G~sP~la~~ir~~Ie~~l 147 (210)
T COG1648 87 ERIAKAARERR-ILVNVVDDPE--------------LCDFIFPAIVDRGPLQIAIS--TGGKSPVLARLLREKIEALL 147 (210)
T ss_pred HHHHHHHHHhC-CceeccCCcc--------------cCceecceeeccCCeEEEEE--CCCCChHHHHHHHHHHHHHc
Confidence 211111112 3333332221 134434443222 22332 48999999988887765443
No 125
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.07 E-value=0.00085 Score=59.49 Aligned_cols=69 Identities=26% Similarity=0.382 Sum_probs=51.5
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------CCCHhhhccCCCEEEEecCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------t~~L~~~~~~ADIVIsAvG~ 285 (368)
||+|||+|.. |.++|..|..+|.+|++..+. |.++++.+++||+||.+++.
T Consensus 1 KI~ViGaG~~-G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs 79 (157)
T PF01210_consen 1 KIAVIGAGNW-GTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS 79 (157)
T ss_dssp EEEEESSSHH-HHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence 6899999987 999999999999999999764 24788999999999999975
Q ss_pred CCc---cc--CCCcCCCcEEEEe
Q 017679 286 ANL---VR--GSWLKPGAVVLDV 303 (368)
Q Consensus 286 p~~---I~--~e~ik~gavVIDv 303 (368)
-.+ ++ ..+++++..+|=+
T Consensus 80 ~~~~~~~~~l~~~l~~~~~ii~~ 102 (157)
T PF01210_consen 80 QAHREVLEQLAPYLKKGQIIISA 102 (157)
T ss_dssp GGHHHHHHHHTTTSHTT-EEEET
T ss_pred HHHHHHHHHHhhccCCCCEEEEe
Confidence 432 21 3456778777654
No 126
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.05 E-value=0.0018 Score=66.89 Aligned_cols=132 Identities=20% Similarity=0.181 Sum_probs=77.7
Q ss_pred HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----CHhhhccCCCEEEEecCC-CCcccCCCcCCC
Q 017679 223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----NPEQITSEADIVIAAAGV-ANLVRGSWLKPG 297 (368)
Q Consensus 223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----~L~~~~~~ADIVIsAvG~-p~~I~~e~ik~g 297 (368)
|.+.+.+++||+|+|||.|.+ |..+|..|.++|++|+++++... .+.+.+++..+-+.. |. +. .....+
T Consensus 7 ~~~~~~~~~~~~v~viG~G~~-G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~-~~~~~----~~~~~D 80 (480)
T PRK01438 7 LTSWHSDWQGLRVVVAGLGVS-GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL-GPGPT----LPEDTD 80 (480)
T ss_pred hhhcccCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE-CCCcc----ccCCCC
Confidence 567778899999999999986 99999999999999999986542 122334333332211 11 11 112234
Q ss_pred cEEEEeecCCCCCCCCCCCCCCcEEEcccchh-hhhc---cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 298 AVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYE-EAMR---LASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 298 avVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~-~~~~---~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.+|+-.|+++...........+-.+.|+.++- ...+ +.-.| -|-|=.|.-|+.-|+.++++.+
T Consensus 81 ~Vv~s~Gi~~~~~~~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I-~VTGTnGKTTTt~mi~~iL~~~ 147 (480)
T PRK01438 81 LVVTSPGWRPDAPLLAAAADAGIPVWGEVELAWRLRDPDRPAPWL-AVTGTNGKTTTVQMLASMLRAA 147 (480)
T ss_pred EEEECCCcCCCCHHHHHHHHCCCeecchHHHHHHhhhccCCCCEE-EEeCCCcHHHHHHHHHHHHHHc
Confidence 45555555543200000001133567777752 2211 11112 4557888999999999998764
No 127
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.05 E-value=0.0012 Score=63.90 Aligned_cols=72 Identities=19% Similarity=0.309 Sum_probs=56.5
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-cC---
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-RG--- 291 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~~--- 291 (368)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.+++... .+ ..
T Consensus 1 ~IgvIG~G~m-G~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~ 79 (291)
T TIGR01505 1 KVGFIGLGIM-GSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGI 79 (291)
T ss_pred CEEEEEecHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchH
Confidence 4789999886 9999999999999999998763 356678899999999998542 11 21
Q ss_pred -CCcCCCcEEEEeecC
Q 017679 292 -SWLKPGAVVLDVGTC 306 (368)
Q Consensus 292 -e~ik~gavVIDvg~n 306 (368)
..+++|.++||.+..
T Consensus 80 ~~~~~~g~iivd~st~ 95 (291)
T TIGR01505 80 IEGAKPGKTLVDMSSI 95 (291)
T ss_pred hhcCCCCCEEEECCCC
Confidence 245789999998754
No 128
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=97.01 E-value=0.0015 Score=64.80 Aligned_cols=75 Identities=17% Similarity=0.290 Sum_probs=58.5
Q ss_pred ccceEEEEccCccchHHHHHHHhh--CCCEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCCc
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR--HHATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL 288 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~--~gAtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~~ 288 (368)
.-+++.|||.|.. |+..+..|.. ...+|.+++++. .+.++.+++|||||++|+....
T Consensus 127 ~~~~lgiiG~G~q-A~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P 205 (325)
T TIGR02371 127 DSSVLGIIGAGRQ-AWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP 205 (325)
T ss_pred CCCEEEEECCCHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4588999999886 8885555443 335788887652 3466888999999999987664
Q ss_pred -ccCCCcCCCcEEEEeecC
Q 017679 289 -VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 289 -I~~e~ik~gavVIDvg~n 306 (368)
+..+|+|||+.|.-+|.+
T Consensus 206 ~~~~~~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 206 VVKADWVSEGTHINAIGAD 224 (325)
T ss_pred EecHHHcCCCCEEEecCCC
Confidence 789999999999999965
No 129
>PLN02712 arogenate dehydrogenase
Probab=97.00 E-value=0.0014 Score=71.28 Aligned_cols=81 Identities=11% Similarity=0.165 Sum_probs=61.4
Q ss_pred HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------CHhhhcc-CCCEEEEecCCCC---
Q 017679 225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------NPEQITS-EADIVIAAAGVAN--- 287 (368)
Q Consensus 225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------~L~~~~~-~ADIVIsAvG~p~--- 287 (368)
..+-++++++|.|||.|.+ |..++..|.+.|.+|+++++... ++.+.+. .+|+||.++....
T Consensus 362 ~~~~~~~~~kIgIIGlG~m-G~slA~~L~~~G~~V~~~dr~~~~~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~ 440 (667)
T PLN02712 362 GCVNDGSKLKIAIVGFGNF-GQFLAKTMVKQGHTVLAYSRSDYSDEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEK 440 (667)
T ss_pred hccCCCCCCEEEEEecCHH-HHHHHHHHHHCcCEEEEEECChHHHHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHH
Confidence 3456788999999999886 99999999999999999887632 3334454 5899999987432
Q ss_pred ccc---CCCcCCCcEEEEeecC
Q 017679 288 LVR---GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 288 ~I~---~e~ik~gavVIDvg~n 306 (368)
++. ...+++|++|+|++..
T Consensus 441 vi~~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 441 VLKSLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHHHHhcCCCCcEEEECCCc
Confidence 222 2357889999999864
No 130
>PRK12861 malic enzyme; Reviewed
Probab=97.00 E-value=0.0022 Score=70.49 Aligned_cols=168 Identities=14% Similarity=0.186 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHcC-CeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCH---HHHHhcCCcccccCccC
Q 017679 120 TYVRNKIKACEEVG-IKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDE---GKILDAVSLEKDVDGFH 195 (368)
Q Consensus 120 ~Yv~~k~k~a~~~G-I~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~---~~il~~I~p~KDVDgl~ 195 (368)
--...|.-.++++| |++.-+.+.. .+.+|+++.++.+. |.+-||++ +.+.. -++++.+..+=|+-.||
T Consensus 91 pvmeGK~~L~~~~agid~~di~~~~-~dpd~~v~~v~a~~--~~fg~i~l-----ED~~~p~~f~il~~~~~~~~ipvf~ 162 (764)
T PRK12861 91 PVMEGKAVLFKKFAGIDVFDIEINE-TDPDKLVDIIAGLE--PTFGGINL-----EDIKAPECFTVERKLRERMKIPVFH 162 (764)
T ss_pred chHHHHHHHHhhccCCCccccccCC-CCHHHHHHHHHHHH--hhcCCcee-----eeccCchHHHHHHHHHhcCCCCeec
Confidence 34456777777664 8866666654 46789998888886 46777554 23333 33444443333565555
Q ss_pred cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC------
Q 017679 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT------ 266 (368)
Q Consensus 196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t------ 266 (368)
.--. |---.+..|++..|+-.+.+++..++++.|+|-+ |..++.+|...|. .+++|+++-
T Consensus 163 DD~q----------GTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaA-g~~ia~~l~~~G~~~~~i~~~D~~Gli~~~r 231 (764)
T PRK12861 163 DDQH----------GTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAA-ALACLDLLVDLGLPVENIWVTDIEGVVYRGR 231 (764)
T ss_pred cccc----------hHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHH-HHHHHHHHHHcCCChhhEEEEcCCCeeeCCC
Confidence 3322 2222355788889999999999999999999988 9999999999997 689997531
Q ss_pred -----------------CCHhhhccCCCEEEEecCCCCcccCCCcCC---CcEEEEeecCCC
Q 017679 267 -----------------KNPEQITSEADIVIAAAGVANLVRGSWLKP---GAVVLDVGTCPV 308 (368)
Q Consensus 267 -----------------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~---gavVIDvg~n~~ 308 (368)
.+|.+.++.+|++|-..+ |+.+++||++. ..+|+=++ ||.
T Consensus 232 ~~~l~~~k~~~a~~~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLs-NPt 291 (764)
T PRK12861 232 TTLMDPDKERFAQETDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALA-NPT 291 (764)
T ss_pred cccCCHHHHHHHhhcCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECC-CCC
Confidence 358899999999997766 89999999854 67888777 554
No 131
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.97 E-value=0.0015 Score=65.34 Aligned_cols=77 Identities=17% Similarity=0.176 Sum_probs=58.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCC---ccc--
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVAN---LVR-- 290 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~---~I~-- 290 (368)
.|+||+|.|||.|.+ |+++|..|...|.+|++.++.. .++.+.+++||+|+..++.+. ++.
T Consensus 13 ~LkgKtVGIIG~GsI-G~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~e 91 (335)
T PRK13403 13 LLQGKTVAVIGYGSQ-GHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAE 91 (335)
T ss_pred hhCcCEEEEEeEcHH-HHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHH
Confidence 478999999999986 9999999999999999986542 157788999999999887532 343
Q ss_pred -CCCcCCCcEE-EEeecC
Q 017679 291 -GSWLKPGAVV-LDVGTC 306 (368)
Q Consensus 291 -~e~ik~gavV-IDvg~n 306 (368)
...+++|+++ +-=|+|
T Consensus 92 il~~MK~GaiL~f~hgfn 109 (335)
T PRK13403 92 VEENLREGQMLLFSHGFN 109 (335)
T ss_pred HHhcCCCCCEEEECCCcc
Confidence 2356888744 333444
No 132
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.97 E-value=0.0018 Score=62.56 Aligned_cols=74 Identities=19% Similarity=0.271 Sum_probs=57.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cc-c---
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LV-R--- 290 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I-~--- 290 (368)
++|.|||.|.+ |.+++..|.+.|.+|++++++. .++.+.++++|+||.+++.+. .+ .
T Consensus 3 ~~IgviG~G~m-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~ 81 (296)
T PRK11559 3 MKVGFIGLGIM-GKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENG 81 (296)
T ss_pred ceEEEEccCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcch
Confidence 47999999876 9999999999999999988752 356677899999999997433 12 1
Q ss_pred -CCCcCCCcEEEEeecCC
Q 017679 291 -GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 291 -~e~ik~gavVIDvg~n~ 307 (368)
...+++|.++||++...
T Consensus 82 ~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 82 IIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HhhcCCCCcEEEECCCCC
Confidence 12467899999998654
No 133
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.96 E-value=0.00074 Score=54.18 Aligned_cols=70 Identities=29% Similarity=0.340 Sum_probs=52.1
Q ss_pred eEEEEccCccchHHHHHHHhhCC---CEEEEE-eCCC---------------C-CHhhhccCCCEEEEecCCCCc--ccC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHH---ATVSIV-HALT---------------K-NPEQITSEADIVIAAAGVANL--VRG 291 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~g---AtVti~-h~~t---------------~-~L~~~~~~ADIVIsAvG~p~~--I~~ 291 (368)
|+.+||.|++ |..++..|.+.| .+|+++ +++. . +..+.+++||+||.++.-..+ +-.
T Consensus 1 kI~iIG~G~m-g~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~ 79 (96)
T PF03807_consen 1 KIGIIGAGNM-GSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLS 79 (96)
T ss_dssp EEEEESTSHH-HHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHH
T ss_pred CEEEECCCHH-HHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHH
Confidence 5889999986 999999999999 899966 6552 1 466788899999999975443 222
Q ss_pred --CCcCCCcEEEEee
Q 017679 292 --SWLKPGAVVLDVG 304 (368)
Q Consensus 292 --e~ik~gavVIDvg 304 (368)
....++.++||+.
T Consensus 80 ~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 80 EIPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHhhccCCCEEEEeC
Confidence 3466788999874
No 134
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.93 E-value=0.0015 Score=63.72 Aligned_cols=75 Identities=21% Similarity=0.309 Sum_probs=58.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC----cccC---
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN----LVRG--- 291 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~----~I~~--- 291 (368)
++|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||.+++... .+..
T Consensus 2 ~~Ig~IGlG~m-G~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~ 80 (296)
T PRK15461 2 AAIAFIGLGQM-GSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENG 80 (296)
T ss_pred CeEEEEeeCHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCccc
Confidence 37999999986 9999999999999999998752 355677899999999998653 1221
Q ss_pred --CCcCCCcEEEEeecCCC
Q 017679 292 --SWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 292 --e~ik~gavVIDvg~n~~ 308 (368)
..+++|.++||+++...
T Consensus 81 i~~~l~~g~lvid~sT~~p 99 (296)
T PRK15461 81 VCEGLSRDALVIDMSTIHP 99 (296)
T ss_pred HhhcCCCCCEEEECCCCCH
Confidence 13578999999987643
No 135
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=96.92 E-value=0.064 Score=53.86 Aligned_cols=142 Identities=11% Similarity=0.003 Sum_probs=97.7
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCccee
Q 017679 123 RNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNI 199 (368)
Q Consensus 123 ~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~ 199 (368)
-.=..++.++|.++.++.- .+. ..|-+.+.++-|+.- +|+|.+-.|- |-...++.+.. + +-.+|.
T Consensus 61 ~SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~iviR~~~--~~~~~~~a~~~----~---vPVINa 128 (334)
T PRK12562 61 CSFEVAAYDQGARVTYLGP-SGSQIGHKESIKDTARVLGRM--YDGIQYRGHG--QEVVETLAEYA----G---VPVWNG 128 (334)
T ss_pred HHHHHHHHHcCCeEEEeCC-ccccCCCCcCHHHHHHHHHHh--CCEEEEECCc--hHHHHHHHHhC----C---CCEEEC
Confidence 3557789999999987742 221 135677777777764 8999998652 22222232222 2 345565
Q ss_pred eeccccCCcCccccCCHHH-HHHHHHHhCC-CCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC-----------
Q 017679 200 GNLAMRGREPLFIPCTPKG-CIELLIRSGV-EIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL----------- 265 (368)
Q Consensus 200 G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i-~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~----------- 265 (368)
| .....||=+.+ ++.+.++.|. .++|+++++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 129 ~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~ 201 (334)
T PRK12562 129 L-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAE 201 (334)
T ss_pred C-------CCCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHH
Confidence 3 23466998888 5555556553 5899999999975 347999999999999999998632
Q ss_pred --------------CCCHhhhccCCCEEEEec
Q 017679 266 --------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 266 --------------t~~L~~~~~~ADIVIsAv 283 (368)
+.++.+.++.||+|.+-.
T Consensus 202 ~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 233 (334)
T PRK12562 202 CSALAQKHGGKITLTEDIAAGVKGADFIYTDV 233 (334)
T ss_pred HHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 246678899999999754
No 136
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=96.91 E-value=0.075 Score=52.58 Aligned_cols=157 Identities=13% Similarity=0.110 Sum_probs=103.5
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679 106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 182 (368)
Q Consensus 106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il 182 (368)
+....++- .| |..=--.=..++.++|.++.++.-+.++ ..|-+.+..+-|+.- +|+|.+-.| .|-...++.
T Consensus 40 k~v~~lF~-~p-STRTR~SFe~A~~~LGg~~i~l~~~~~s~~~kgEsi~Dta~vls~y--~D~iviR~~--~~~~~~~~a 113 (301)
T TIGR00670 40 KILANLFF-EP-STRTRLSFETAMKRLGGDVVNFSDSETSSVAKGETLADTIKTLSGY--SDAIVIRHP--LEGAARLAA 113 (301)
T ss_pred CEEEEEec-cC-CchhHhHHHHHHHHcCCcEEEcCCCCcccCCCCcCHHHHHHHHHHh--CCEEEEECC--chhHHHHHH
Confidence 33444442 33 4333335678899999988776441221 134566666666664 789999865 344444443
Q ss_pred hcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEE
Q 017679 183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATV 259 (368)
Q Consensus 183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtV 259 (368)
+.. ++-.+|.|- ...+.||=+.+ ++.+.++.| +++|++|+++|-+ +.|.+.++.++...|++|
T Consensus 114 ~~s-------~vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g-~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v 179 (301)
T TIGR00670 114 EVS-------EVPVINAGD------GSNQHPTQTLLDLYTIYEEFG-RLDGLKIALVGDLKYGRTVHSLAEALTRFGVEV 179 (301)
T ss_pred hhC-------CCCEEeCCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEE
Confidence 332 244556531 13467998888 444444554 7999999999987 567999999999999999
Q ss_pred EEEeCC---------------------CCCHhhhccCCCEEEEe
Q 017679 260 SIVHAL---------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 260 ti~h~~---------------------t~~L~~~~~~ADIVIsA 282 (368)
++++-. +.++++.++.||+|.+-
T Consensus 180 ~~~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~ 223 (301)
T TIGR00670 180 YLISPEELRMPKEILEELKAKGIKVRETESLEEVIDEADVLYVT 223 (301)
T ss_pred EEECCccccCCHHHHHHHHHcCCEEEEECCHHHHhCCCCEEEEC
Confidence 999733 24567788999998874
No 137
>PLN02256 arogenate dehydrogenase
Probab=96.89 E-value=0.0026 Score=62.80 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=59.3
Q ss_pred HhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhc-cCCCEEEEecCCCC---
Q 017679 225 RSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN--- 287 (368)
Q Consensus 225 ~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~-~~ADIVIsAvG~p~--- 287 (368)
+.-.+-+++++.|||.|.+ |..++..|.+.|.+|+++.+.. .++.+.+ .++|+||.|++...
T Consensus 29 ~~~~~~~~~kI~IIG~G~m-G~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~ 107 (304)
T PLN02256 29 EELEKSRKLKIGIVGFGNF-GQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEA 107 (304)
T ss_pred HhhccCCCCEEEEEeeCHH-HHHHHHHHHhCCCEEEEEECccHHHHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHH
Confidence 3334457889999999886 9999999999998999887653 1334444 46999999997432
Q ss_pred ccc---CCCcCCCcEEEEeec
Q 017679 288 LVR---GSWLKPGAVVLDVGT 305 (368)
Q Consensus 288 ~I~---~e~ik~gavVIDvg~ 305 (368)
++. ...++++++|+|++.
T Consensus 108 vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 108 VLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred HHHhhhhhccCCCCEEEecCC
Confidence 222 234688999999997
No 138
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.87 E-value=0.0014 Score=61.62 Aligned_cols=72 Identities=26% Similarity=0.337 Sum_probs=56.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CHhhhccCCCEEEEecCCCCc---cc--
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NPEQITSEADIVIAAAGVANL---VR-- 290 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L~~~~~~ADIVIsAvG~p~~---I~-- 290 (368)
+++.|+|+|++ |..++..|...|.+|+|-+|+.+ ..++.++.|||||.|++-... +.
T Consensus 2 ~~~~i~GtGni-G~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~~~l 80 (211)
T COG2085 2 MIIAIIGTGNI-GSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVLAEL 80 (211)
T ss_pred cEEEEeccChH-HHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHHHHH
Confidence 57899999997 99999999999999999977653 345778999999999986543 21
Q ss_pred CCCcCCCcEEEEeecCC
Q 017679 291 GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 291 ~e~ik~gavVIDvg~n~ 307 (368)
.+++. |.+|||+. ||
T Consensus 81 ~~~~~-~KIvID~t-np 95 (211)
T COG2085 81 RDALG-GKIVIDAT-NP 95 (211)
T ss_pred HHHhC-CeEEEecC-CC
Confidence 23344 89999987 54
No 139
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=96.86 E-value=0.019 Score=57.61 Aligned_cols=146 Identities=12% Similarity=0.068 Sum_probs=99.0
Q ss_pred cccHHHHHHHHHHHHHcCCeEEEEEcCCCC----CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCccccc
Q 017679 116 RDSQTYVRNKIKACEEVGIKSIVTEFADGC----TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191 (368)
Q Consensus 116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~----~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDV 191 (368)
|...+- -.=..++.++|.++..+ +.+. ..|.+.+.++-|+.- +|+|.+--| .|-...++.+.. +
T Consensus 56 pSTRTR-~SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iv~R~~--~~~~~~~~a~~~----~- 123 (334)
T PRK01713 56 TSTRTR-CAFEVAAYDQGAQVTYI--DPNSSQIGHKESMKDTARVLGRM--YDAIEYRGF--KQSIVNELAEYA----G- 123 (334)
T ss_pred CCchHH-HHHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEEcC--chHHHHHHHHhC----C-
Confidence 433333 34567889999998765 3221 135677777777764 889999865 222222332222 2
Q ss_pred CccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC----
Q 017679 192 DGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL---- 265 (368)
Q Consensus 192 Dgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~---- 265 (368)
+-.+|.+ .+...||=+.+ ++.+.++.|.+++|++|++||-+ ..|.+.++.++...|++|++|+-.
T Consensus 124 --vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~p 194 (334)
T PRK01713 124 --VPVFNGL-------TDEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKALLP 194 (334)
T ss_pred --CCEEECC-------CCCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchhcC
Confidence 3445642 23467998888 55565666657999999999986 458999999999999999999632
Q ss_pred ---------------------CCCHhhhccCCCEEEEe
Q 017679 266 ---------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 266 ---------------------t~~L~~~~~~ADIVIsA 282 (368)
+.++.+.+++||+|.+-
T Consensus 195 ~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~ 232 (334)
T PRK01713 195 EASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTD 232 (334)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 14667889999999973
No 140
>PLN02342 ornithine carbamoyltransferase
Probab=96.85 E-value=0.082 Score=53.41 Aligned_cols=188 Identities=13% Similarity=0.095 Sum_probs=118.5
Q ss_pred eeeecHHHHHHHHHHHHHHHHHHHHcC--C------CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--
Q 017679 75 TVIDGKSIAEEIRSGIDKEVRRMKKSI--G------KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG-- 144 (368)
Q Consensus 75 ~ildGk~ia~~i~~~i~~~v~~l~~~~--g------~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~-- 144 (368)
.+|+-..+.++=.+.|-+...++|+.. + ..-+....++- .|.-.+- -.=..++.++|.++.++.-...
T Consensus 47 ~~lsi~dls~~ei~~ll~~A~~lk~~~~~~~~~~~~L~gk~va~lF~-epSTRTR-~SFE~A~~~LGg~~i~l~~~~ss~ 124 (348)
T PLN02342 47 HFLHIDDFDKEEILGLLDRAKEVKALLKSGDRSFQPFKGKSMAMIFT-KPSMRTR-VSFETGFFLLGGHALYLGPDDIQL 124 (348)
T ss_pred CccchhhCCHHHHHHHHHHHHHHHhhhhcCccccccCCCCEEEEEec-CCCcchH-HHHHHHHHHcCCcEEEeCcccccC
Confidence 467777776554455555555555421 1 11223333343 3333333 3556789999999987632110
Q ss_pred CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHH
Q 017679 145 CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELL 223 (368)
Q Consensus 145 ~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL 223 (368)
...|.+.+.++-|..- +|+|.+-.|-. -. ++.+... -.+-.+|.| ...+.||=+.+ ++.+.
T Consensus 125 ~kGESl~DTarvLs~y--~D~IviR~~~~--~~----~~~la~~---~~vPVINA~-------~~~~HPtQaLaDl~Ti~ 186 (348)
T PLN02342 125 GKREETRDIARVLSRY--NDIIMARVFAH--QD----VLDLAEY---SSVPVINGL-------TDYNHPCQIMADALTII 186 (348)
T ss_pred CCCcCHHHHHHHHHHh--CCEEEEeCCCh--HH----HHHHHHh---CCCCEEECC-------CCCCChHHHHHHHHHHH
Confidence 0124566777766664 78999986622 22 2223221 124456652 23457998888 44444
Q ss_pred HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------CCCHhhhccCCCEEEE
Q 017679 224 IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------TKNPEQITSEADIVIA 281 (368)
Q Consensus 224 ~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------t~~L~~~~~~ADIVIs 281 (368)
++.| +++|++|++||-+..|.+.++.++...|++|++|+-. +.++.+.++.||+|.+
T Consensus 187 e~~G-~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~ 265 (348)
T PLN02342 187 EHIG-RLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYEPDAKTVEKARAAGISKIEITNDPAEAVKGADVVYT 265 (348)
T ss_pred HHhC-CcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccccCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEE
Confidence 5555 7999999999998889999999999999999999622 2466788999999997
Q ss_pred ec
Q 017679 282 AA 283 (368)
Q Consensus 282 Av 283 (368)
-.
T Consensus 266 ~~ 267 (348)
T PLN02342 266 DV 267 (348)
T ss_pred CC
Confidence 63
No 141
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.84 E-value=0.0026 Score=62.23 Aligned_cols=74 Identities=26% Similarity=0.369 Sum_probs=57.8
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------------CH-hhhccCCCEEEEecCCCC---cc
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------NP-EQITSEADIVIAAAGVAN---LV 289 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------~L-~~~~~~ADIVIsAvG~p~---~I 289 (368)
-++|+|+|.|.+ |+.++..|.++|..|.++.+... +. .+....||+||.|++... ++
T Consensus 3 ~~~v~IvG~Gli-G~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGLM-GGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CcEEEEECCchH-HHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH
Confidence 368999998886 99999999999999888875431 22 566778999999998543 22
Q ss_pred c--CCCcCCCcEEEEeecC
Q 017679 290 R--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 290 ~--~e~ik~gavVIDvg~n 306 (368)
. ...+++|++|.|+|..
T Consensus 82 ~~l~~~l~~g~iv~Dv~S~ 100 (279)
T COG0287 82 KELAPHLKKGAIVTDVGSV 100 (279)
T ss_pred HHhcccCCCCCEEEecccc
Confidence 1 1278999999999975
No 142
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=96.82 E-value=0.022 Score=57.05 Aligned_cols=154 Identities=8% Similarity=-0.048 Sum_probs=102.3
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679 107 LAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 182 (368)
Q Consensus 107 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il 182 (368)
....++= .|...+.. .=..++.++|.++.+. ..+.+ -|.+.+.++-|+.- +|+|.+-.| .|-...++.
T Consensus 47 ~l~~lF~-epSTRTR~-SFe~A~~~LGg~~i~l--~~~~ss~~kgEsl~DTarvls~y--~D~iviR~~--~~~~~~~~a 118 (332)
T PRK04284 47 NIALIFE-KDSTRTRC-AFEVAAYDQGAHVTYL--GPTGSQMGKKESTKDTARVLGGM--YDGIEYRGF--SQRTVETLA 118 (332)
T ss_pred EEEEEec-CCChhHHH-HHHHHHHHcCCeEEEc--CCccccCCCCcCHHHHHHHHHHh--CCEEEEecC--chHHHHHHH
Confidence 3344443 34444443 5567889999998754 33222 35677777777764 889999765 323223332
Q ss_pred hcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHh-CCCCccceEEEEccC-ccchHHHHHHHhhCCCEEE
Q 017679 183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRS-GVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVS 260 (368)
Q Consensus 183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~-~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVt 260 (368)
+.. . +-.+|.| .....||=+.+=+--++++ ...++|++|++||-+ +.|.+.++.+|...|++|+
T Consensus 119 ~~s----~---vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~ 184 (332)
T PRK04284 119 EYS----G---VPVWNGL-------TDEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFH 184 (332)
T ss_pred HhC----C---CCEEECC-------CCCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEE
Confidence 222 2 3455642 2346799888844445554 457999999999975 4579999999999999999
Q ss_pred EEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679 261 IVHAL-------------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 261 i~h~~-------------------------t~~L~~~~~~ADIVIsA 282 (368)
+++-. +.++.+.+++||+|.+-
T Consensus 185 ~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 185 LVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred EECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 99733 24667889999999975
No 143
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=96.81 E-value=0.021 Score=57.34 Aligned_cols=140 Identities=11% Similarity=0.008 Sum_probs=97.3
Q ss_pred HHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcce
Q 017679 123 RNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLN 198 (368)
Q Consensus 123 ~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N 198 (368)
-.=..++.++|.++.+.. .+.+ .|.+.+.++-|+.- +|+|.+-.| .|-...++.+.. ++-.+|
T Consensus 61 ~SFe~A~~~LGg~~i~l~--~~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~--~~~~~~~~a~~~-------~vPVIN 127 (336)
T PRK03515 61 CSFEVAAYDQGARVTYLG--PSGSQIGHKESIKDTARVLGRM--YDGIQYRGY--GQEIVETLAEYA-------GVPVWN 127 (336)
T ss_pred HHHHHHHHHcCCcEEEeC--CccccCCCCCCHHHHHHHHHHh--CcEEEEEeC--ChHHHHHHHHhC-------CCCEEE
Confidence 355678899999988753 2222 35677778777764 899999865 333333333322 134456
Q ss_pred eeeccccCCcCccccCCHHH-HHHHHHHhC-CCCccceEEEEccC-ccchHHHHHHHhhCCCEEEEEeCC----------
Q 017679 199 IGNLAMRGREPLFIPCTPKG-CIELLIRSG-VEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSIVHAL---------- 265 (368)
Q Consensus 199 ~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~-i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti~h~~---------- 265 (368)
.+ .....||=+.+ ++.+.++.| .+++|++++.||-+ ..|.+.++.++...|++|++|+-.
T Consensus 128 a~-------~~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~ 200 (336)
T PRK03515 128 GL-------TNEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVT 200 (336)
T ss_pred CC-------CCCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcCcHHHHH
Confidence 42 23467998888 555555555 37999999999975 347999999999999999999632
Q ss_pred ---------------CCCHhhhccCCCEEEEe
Q 017679 266 ---------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 266 ---------------t~~L~~~~~~ADIVIsA 282 (368)
+.++++.+++||+|.+-
T Consensus 201 ~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 201 ECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred HHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24667889999999975
No 144
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=96.80 E-value=0.025 Score=56.82 Aligned_cols=178 Identities=11% Similarity=0.094 Sum_probs=115.7
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679 106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 182 (368)
Q Consensus 106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il 182 (368)
+....++= .|...+-+ .=..++.++|-++.++.- .+++ .|.+.+.++-|+.- +|+|.+-.+ .|-...++.
T Consensus 43 k~v~~lF~-epSTRTR~-SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dtarvls~y--~D~iviR~~--~~~~~~~~a 115 (338)
T PRK02255 43 KTLGMIFE-QSSTRTRV-SFETAMTQLGGHAQYLAP-GQIQLGGHESLEDTARVLSRL--VDIIMARVD--RHQTVVELA 115 (338)
T ss_pred CEEEEEeC-CCCcchHH-HHHHHHHHcCCeEEEeCc-ccccCCCCcCHHHHHHHHHHh--CcEEEEecC--ChHHHHHHH
Confidence 33444443 34444443 567889999999887752 2211 35577777777764 789988765 333333332
Q ss_pred hcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhC--CCCccceEEEEccCccchHHHHHHHhhCCCEE
Q 017679 183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSG--VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATV 259 (368)
Q Consensus 183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~--i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtV 259 (368)
+.. .+-.+|.| .....||=+.+ ++.+.++.+ -+++|++|++||-...|.+.++.++...|++|
T Consensus 116 ~~~-------~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v 181 (338)
T PRK02255 116 KYA-------TVPVINGM-------SDYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDF 181 (338)
T ss_pred HhC-------CCCEEECC-------CCCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEE
Confidence 221 23455632 23357998888 555555654 36999999999997788999999999999999
Q ss_pred EEEeCC-------------------------CCCHhhhccCCCEEEEe-----cCC------------CCc-ccCCCc--
Q 017679 260 SIVHAL-------------------------TKNPEQITSEADIVIAA-----AGV------------ANL-VRGSWL-- 294 (368)
Q Consensus 260 ti~h~~-------------------------t~~L~~~~~~ADIVIsA-----vG~------------p~~-I~~e~i-- 294 (368)
++|+-. +.++.+.++.||+|.+- .+. +.+ |+.+.+
T Consensus 182 ~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~w~~~~~~~~~~~~r~~~~~~~y~v~~ell~~ 261 (338)
T PRK02255 182 VHFGPKGYQLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYTDVWYGLYDAELSEEERMAIFYPKYQVTPELMAK 261 (338)
T ss_pred EEECCCccccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcccHhhccchhhHHHHHHhhCCCceECHHHHhc
Confidence 999632 24677899999999983 332 223 555543
Q ss_pred -CCCcEEEEee
Q 017679 295 -KPGAVVLDVG 304 (368)
Q Consensus 295 -k~gavVIDvg 304 (368)
+++++|.=++
T Consensus 262 a~~~~ivmHpL 272 (338)
T PRK02255 262 AGPHAKFMHCL 272 (338)
T ss_pred cCCCCEEeCCC
Confidence 6677776655
No 145
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=96.77 E-value=0.0033 Score=61.96 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=60.2
Q ss_pred ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
.-+++.|||+|.- |+.-+..+..- + .+|.+.+++. .+.++.+++||||+++|+...
T Consensus 116 da~~l~iiGaG~Q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~ 194 (301)
T PRK06407 116 NVENFTIIGSGFQ-AETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDT 194 (301)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCC
Confidence 4689999999876 88777666643 3 3788887652 356788999999999999776
Q ss_pred c-ccCCCcCCCcEEEEeecCC
Q 017679 288 L-VRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 ~-I~~e~ik~gavVIDvg~n~ 307 (368)
. ++.+|++||+.|.=+|.+.
T Consensus 195 P~~~~~~l~pg~hV~aiGs~~ 215 (301)
T PRK06407 195 PIFNRKYLGDEYHVNLAGSNY 215 (301)
T ss_pred cEecHHHcCCCceEEecCCCC
Confidence 5 7999999999999999754
No 146
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=96.72 E-value=0.098 Score=51.79 Aligned_cols=147 Identities=12% Similarity=0.091 Sum_probs=98.5
Q ss_pred cccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccC
Q 017679 116 RDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVD 192 (368)
Q Consensus 116 ~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVD 192 (368)
|...+.. .=..++.++|.++.++. +.+++ -|.+.+.++-|+.- +|+|.+-.| .|-....+.+.. +
T Consensus 48 pSTRTR~-SFE~A~~~LGg~~i~l~-~~~ss~~kgEsl~Dt~~vls~y--~D~iviR~~--~~~~~~~~a~~~----~-- 115 (302)
T PRK14805 48 PSLRTRV-SFDIGINKLGGHCLYLD-QQNGALGKRESVADFAANLSCW--ADAIVARVF--SHSTIEQLAEHG----S-- 115 (302)
T ss_pred CCchHHH-HHHHHHHHcCCcEEECC-CCcCcCCCCcCHHHHHHHHHHh--CCEEEEeCC--ChhHHHHHHHhC----C--
Confidence 4444443 56789999999988764 22211 35577777777764 889998865 332223332221 2
Q ss_pred ccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------
Q 017679 193 GFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------ 266 (368)
Q Consensus 193 gl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------ 266 (368)
+-.+|.|- ....||=+.+=+--++++..+++|++|+++|-+..|.+.++.++...|++|++++-..
T Consensus 116 -vPVINa~~-------~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~ 187 (302)
T PRK14805 116 -VPVINALC-------DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQ 187 (302)
T ss_pred -CCEEECCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHH
Confidence 45566532 2367998888444444444479999999999988899999999999999999996321
Q ss_pred -------------------CCHhhhccCCCEEEEec
Q 017679 267 -------------------KNPEQITSEADIVIAAA 283 (368)
Q Consensus 267 -------------------~~L~~~~~~ADIVIsAv 283 (368)
.++ +.++.||+|.+-+
T Consensus 188 ~~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 188 IVAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred HHHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 232 4578899988743
No 147
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.71 E-value=0.0022 Score=62.63 Aligned_cols=74 Identities=26% Similarity=0.325 Sum_probs=56.9
Q ss_pred cceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---cc
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---VR 290 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~---I~ 290 (368)
.++|.|||.|.+ |..++..|.+.|. .|+++.++. .++.+.+++||+||.+++.... +.
T Consensus 6 ~~~I~IIG~G~m-G~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~ 84 (307)
T PRK07502 6 FDRVALIGIGLI-GSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAA 84 (307)
T ss_pred CcEEEEEeeCHH-HHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHH
Confidence 368999998876 9999999998884 788887652 2455678899999999985431 21
Q ss_pred --CCCcCCCcEEEEeecC
Q 017679 291 --GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 291 --~e~ik~gavVIDvg~n 306 (368)
..++++|.+|+|+|..
T Consensus 85 ~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 85 EIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHhhCCCCCEEEeCccc
Confidence 2467889999999863
No 148
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=96.70 E-value=0.041 Score=55.17 Aligned_cols=156 Identities=11% Similarity=0.018 Sum_probs=101.6
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHH
Q 017679 106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKIL 182 (368)
Q Consensus 106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il 182 (368)
+....++= .| |..=--.=..++.++|..+.+..- .++ ..|.+.+.++-|..- +|+|.+--|- +-...++.
T Consensus 47 k~v~~lF~-ep-STRTR~SFe~A~~~LGg~~i~l~~-~~ss~~kgEsl~Dt~rvls~y--~D~iviR~~~--~~~~~~~a 119 (331)
T PRK02102 47 KNIALIFE-KT-STRTRCAFEVAAIDLGAHVTYLGP-NDSQLGKKESIEDTARVLGRM--YDGIEYRGFK--QEIVEELA 119 (331)
T ss_pred CEEEEEeC-CC-ChhHHHHHHHHHHHcCCCEEEcCc-ccccCCCCcCHHHHHHHHhhc--CCEEEEECCc--hHHHHHHH
Confidence 33444443 23 433333557789999999875532 111 135677777777663 8899998652 22222332
Q ss_pred hcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC-ccchHHHHHHHhhCCCEEEE
Q 017679 183 DAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-NIVGLPTSLLLQRHHATVSI 261 (368)
Q Consensus 183 ~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g-~~VGrpla~lL~~~gAtVti 261 (368)
+.. + +-.+|.|. ....||=+.+=+--++++...++|++|++||.+ ..|.+.++.++...|++|++
T Consensus 120 ~~~----~---vPVINa~~-------~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~ 185 (331)
T PRK02102 120 KYS----G---VPVWNGLT-------DEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRI 185 (331)
T ss_pred HhC----C---CCEEECCC-------CCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEE
Confidence 222 2 33456532 346699888854445444457999999999986 44799999999999999999
Q ss_pred EeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679 262 VHAL-------------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 262 ~h~~-------------------------t~~L~~~~~~ADIVIsA 282 (368)
++-. +.++++.++.||+|.+-
T Consensus 186 ~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 231 (331)
T PRK02102 186 CAPKELWPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTD 231 (331)
T ss_pred ECCcccccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 9632 24567889999999975
No 149
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.67 E-value=0.0018 Score=62.58 Aligned_cols=72 Identities=28% Similarity=0.266 Sum_probs=54.8
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------HhhhccCCCEEEEecCCCCc---cc--CCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------PEQITSEADIVIAAAGVANL---VR--GSW 293 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------L~~~~~~ADIVIsAvG~p~~---I~--~e~ 293 (368)
+|.|||.|.+ |..++..|.+.|.+|+++.++... ..+.+++||+||.|++.... +. ...
T Consensus 2 ~I~IIG~G~m-G~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~ 80 (279)
T PRK07417 2 KIGIVGLGLI-GGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPA 80 (279)
T ss_pred eEEEEeecHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHh
Confidence 6899999876 999999999999999999875321 12357899999999974322 21 234
Q ss_pred cCCCcEEEEeecC
Q 017679 294 LKPGAVVLDVGTC 306 (368)
Q Consensus 294 ik~gavVIDvg~n 306 (368)
++++.+|.|++.-
T Consensus 81 l~~~~ii~d~~Sv 93 (279)
T PRK07417 81 LPPEAIVTDVGSV 93 (279)
T ss_pred CCCCcEEEeCcch
Confidence 6789999999864
No 150
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.65 E-value=0.0034 Score=61.46 Aligned_cols=92 Identities=13% Similarity=0.270 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC----CC-------EEEEEeCCC----------------
Q 017679 214 CTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT---------------- 266 (368)
Q Consensus 214 cTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~----gA-------tVti~h~~t---------------- 266 (368)
++-.|++..++-.+.+++..++++.|+|-+ |..++.+|... |. .+++++++-
T Consensus 7 V~lAgllnAlk~~g~~l~d~~iv~~GAGsA-g~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~ 85 (279)
T cd05312 7 VALAGLLAALRITGKPLSDQRILFLGAGSA-GIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPF 85 (279)
T ss_pred HHHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHH
Confidence 345788999999999999999999999988 99999888765 76 788887641
Q ss_pred ---------CCHhhhcc--CCCEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679 267 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP 307 (368)
Q Consensus 267 ---------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~ 307 (368)
.+|.+.++ ++|++|-..+.++.+++|+++ +.-+|+=+. ||
T Consensus 86 a~~~~~~~~~~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP 142 (279)
T cd05312 86 ARKDEEKEGKSLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALS-NP 142 (279)
T ss_pred HhhcCcccCCCHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECC-Cc
Confidence 25778888 899999999888999999875 356777776 44
No 151
>PRK13814 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.59 E-value=0.069 Score=53.10 Aligned_cols=149 Identities=9% Similarity=0.046 Sum_probs=97.0
Q ss_pred CcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC----HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccc
Q 017679 115 RRDSQTYVRNKIKACEEVGIKSIVTEFADGCT----EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD 190 (368)
Q Consensus 115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~----~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KD 190 (368)
.|.-.+.. .=..++.++|..+.+. ....+ .|-+.+.++-|+.- .+|+|++-.| .|-...++.+.+
T Consensus 54 epSTRTR~-SFe~A~~~LGg~~~~~--~~~~s~~~kgEsl~Dtarvls~y-~~D~iv~R~~--~~~~~~~~a~~~----- 122 (310)
T PRK13814 54 EPSTRTRN-SFEIAAKRLGAMVLNP--NLKISAISKGETLFDTIKTLEAM-GVYFFIVRHS--ENETPEQIAKQL----- 122 (310)
T ss_pred cCcchhHH-HHHHHHHHhCCeEEEC--CCccccCCCCCCHHHHHHHHHHh-CCCEEEEeCC--chhHHHHHHHhC-----
Confidence 34444443 4567888999977664 32211 24466666666552 3578887754 333333333332
Q ss_pred cCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCC-EEEEEeCC--
Q 017679 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHA-TVSIVHAL-- 265 (368)
Q Consensus 191 VDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gA-tVti~h~~-- 265 (368)
..+-++|.|. .+.+.||=+.+=+--++++...++|++|+++|-+ +-|.+.++.++...|+ +|++|+-.
T Consensus 123 -~~vPvINag~------g~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGD~~~~rv~~Sl~~~~a~~g~~~v~~~~P~~~ 195 (310)
T PRK13814 123 -SSGVVINAGD------GNHQHPSQALIDLMTIKQHKPHWNKLCVTIIGDIRHSRVANSLMDGLVTMGVPEIRLVGPSSL 195 (310)
T ss_pred -CCCCeEECCc------CCCCCchHHHHHHHHHHHHhCCcCCcEEEEECCCCCCcHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 1245567542 3456799888844444444457999999999986 4679999999999998 99998632
Q ss_pred ------------CCCHhhhccCCCEEEE
Q 017679 266 ------------TKNPEQITSEADIVIA 281 (368)
Q Consensus 266 ------------t~~L~~~~~~ADIVIs 281 (368)
+.++.+.++.||+|.+
T Consensus 196 ~p~~~~~~~~~~~~d~~ea~~~aDvvy~ 223 (310)
T PRK13814 196 LPDKVGNDSIKKFTELKPSLLNSDVIVT 223 (310)
T ss_pred CcCccccceEEEEcCHHHHhCCCCEEEE
Confidence 2567889999999986
No 152
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.58 E-value=0.0037 Score=64.08 Aligned_cols=74 Identities=27% Similarity=0.349 Sum_probs=55.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhh---------------ccCCCEEEEe
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQI---------------TSEADIVIAA 282 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~---------------~~~ADIVIsA 282 (368)
++|.|||.|.+ |.|+|..|++.|.+|+.++++.. .+.+. .++||+||.+
T Consensus 4 ~kI~VIGlG~~-G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYI-GLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchh-hHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 68999999875 99999999999999999987542 22222 2379999999
Q ss_pred cCCC---------Cccc------CCCcCCCcEEEEeecCC
Q 017679 283 AGVA---------NLVR------GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 283 vG~p---------~~I~------~e~ik~gavVIDvg~n~ 307 (368)
++.| ..+. ...+++|++||+..+.+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 9986 1221 23568899999987754
No 153
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=96.56 E-value=0.036 Score=54.81 Aligned_cols=155 Identities=15% Similarity=0.194 Sum_probs=101.9
Q ss_pred EEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhc
Q 017679 107 LAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA 184 (368)
Q Consensus 107 LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~ 184 (368)
.+..++=+ |...+- -.=..++.++|.++.++.-... ...|-+.+.++-|+.- +|+|.+-.|-. -....+.+.
T Consensus 41 ~v~~lF~e-pSTRTR-~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~vls~y--~D~iv~R~~~~--~~~~~~a~~ 114 (304)
T TIGR00658 41 TLALIFEK-PSTRTR-VSFEVAAYQLGGHPLYLNPNDLQLGRGESIKDTARVLSRY--VDGIMARVYKH--EDVEELAKY 114 (304)
T ss_pred EEEEEecC-CCcchH-HHHHHHHHHcCCCEEEeCCccccCCCCCCHHHHHHHHHHh--CCEEEEECCCh--HHHHHHHHh
Confidence 44444432 333333 3557889999999887643211 0135577777777764 78999986632 222233222
Q ss_pred CCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679 185 VSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 263 (368)
Q Consensus 185 I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h 263 (368)
. ++-.+|.| .....||=+.+ ++.+.++.| .++|.+|+++|..+.|.+.++.+|.+.|++|++++
T Consensus 115 ~-------~vPVINa~-------~~~~HPtQaL~Dl~Ti~e~~g-~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~ 179 (304)
T TIGR00658 115 A-------SVPVINGL-------TDLFHPCQALADLLTIIEHFG-KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVAT 179 (304)
T ss_pred C-------CCCEEECC-------CCCCChHHHHHHHHHHHHHhC-CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEEC
Confidence 2 23455653 13466998888 444444554 69999999999977789999999999999999997
Q ss_pred CC-------------------------CCCHhhhccCCCEEEEe
Q 017679 264 AL-------------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 264 ~~-------------------------t~~L~~~~~~ADIVIsA 282 (368)
-. +.++++.+++||+|.+-
T Consensus 180 P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 223 (304)
T TIGR00658 180 PEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTD 223 (304)
T ss_pred CchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 32 24667889999999974
No 154
>PRK06046 alanine dehydrogenase; Validated
Probab=96.55 E-value=0.0057 Score=60.73 Aligned_cols=74 Identities=20% Similarity=0.327 Sum_probs=57.7
Q ss_pred ccceEEEEccCccchHHHHHHHhh-CCC-EEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR-HHA-TVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~-~gA-tVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
.-+++.|||.|.. |+..+..|.. .+. .|.+++++. .++++.+. +|+|+++|+...
T Consensus 128 ~~~~vgiiG~G~q-a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~ 205 (326)
T PRK06046 128 DSKVVGIIGAGNQ-ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRK 205 (326)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCC
Confidence 4579999999987 9888887764 344 688887652 23555565 999999998655
Q ss_pred c-ccCCCcCCCcEEEEeecC
Q 017679 288 L-VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 288 ~-I~~e~ik~gavVIDvg~n 306 (368)
. +..+|+++|+.|.-+|.+
T Consensus 206 P~~~~~~l~~g~hV~~iGs~ 225 (326)
T PRK06046 206 PVVKAEWIKEGTHINAIGAD 225 (326)
T ss_pred cEecHHHcCCCCEEEecCCC
Confidence 4 799999999999999965
No 155
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.55 E-value=0.0041 Score=56.44 Aligned_cols=76 Identities=25% Similarity=0.296 Sum_probs=51.4
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CHhhhccCCCEEEEecCC---CCccc--
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NPEQITSEADIVIAAAGV---ANLVR-- 290 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L~~~~~~ADIVIsAvG~---p~~I~-- 290 (368)
|+||+|.|||.|.- |+.-|..|...|.+|++..+... +..+.+++||+|+..++- +....
T Consensus 2 l~~k~IAViGyGsQ-G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~ 80 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQ-GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEE 80 (165)
T ss_dssp HCTSEEEEES-SHH-HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHH
T ss_pred cCCCEEEEECCChH-HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHH
Confidence 58999999999987 99999999999999999987642 567899999999999862 22221
Q ss_pred -CCCcCCCcE-EEEeecC
Q 017679 291 -GSWLKPGAV-VLDVGTC 306 (368)
Q Consensus 291 -~e~ik~gav-VIDvg~n 306 (368)
...+++|++ ++==|+|
T Consensus 81 I~p~l~~G~~L~fahGfn 98 (165)
T PF07991_consen 81 IAPNLKPGATLVFAHGFN 98 (165)
T ss_dssp HHHHS-TT-EEEESSSHH
T ss_pred HHhhCCCCCEEEeCCcch
Confidence 124778854 3444444
No 156
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=96.53 E-value=0.0042 Score=60.17 Aligned_cols=70 Identities=21% Similarity=0.291 Sum_probs=55.1
Q ss_pred EEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----cc-----CCC
Q 017679 237 VIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----VR-----GSW 293 (368)
Q Consensus 237 VIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I~-----~e~ 293 (368)
+||.|.+ |.+++..|.+.|.+|++++++. .+..+.++++|+||.+++.+.. +. .+.
T Consensus 1 ~IGlG~m-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~ 79 (288)
T TIGR01692 1 FIGLGNM-GGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPK 79 (288)
T ss_pred CCcccHh-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhc
Confidence 5798876 9999999999999999998762 3566788999999999986442 21 124
Q ss_pred cCCCcEEEEeecCC
Q 017679 294 LKPGAVVLDVGTCP 307 (368)
Q Consensus 294 ik~gavVIDvg~n~ 307 (368)
+++|.+|||+++..
T Consensus 80 ~~~g~~vid~st~~ 93 (288)
T TIGR01692 80 VAKGSLLIDCSTID 93 (288)
T ss_pred CCCCCEEEECCCCC
Confidence 57899999998654
No 157
>PRK06823 ornithine cyclodeaminase; Validated
Probab=96.53 E-value=0.0057 Score=60.71 Aligned_cols=76 Identities=9% Similarity=0.160 Sum_probs=56.5
Q ss_pred ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCCc
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVANL 288 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~~ 288 (368)
.-+++.|||.|.- ++.-+..+..- . .+|.+.+++. .+.++.+++||||+++|+....
T Consensus 127 d~~~l~iiG~G~q-A~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P 205 (315)
T PRK06823 127 HVSAIGIVGTGIQ-ARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP 205 (315)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc
Confidence 4567788887765 76666655432 2 3677776542 3567889999999999997665
Q ss_pred -ccCCCcCCCcEEEEeecCC
Q 017679 289 -VRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 289 -I~~e~ik~gavVIDvg~n~ 307 (368)
++.+|++||+.|+=+|.+.
T Consensus 206 ~~~~~~l~~G~hi~~iGs~~ 225 (315)
T PRK06823 206 LLQAEDIQPGTHITAVGADS 225 (315)
T ss_pred eeCHHHcCCCcEEEecCCCC
Confidence 7999999999999999653
No 158
>PRK06545 prephenate dehydrogenase; Validated
Probab=96.51 E-value=0.0045 Score=62.12 Aligned_cols=73 Identities=27% Similarity=0.421 Sum_probs=55.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------CCHhhhccCCCEEEEecCCCC---cc--
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------KNPEQITSEADIVIAAAGVAN---LV-- 289 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------~~L~~~~~~ADIVIsAvG~p~---~I-- 289 (368)
++|.|||.|.+ |..++..|.+.|..|.+..+.. .++.+.+++||+||.|++... ++
T Consensus 1 ~~I~iIG~Gli-G~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl~~ 79 (359)
T PRK06545 1 RTVLIVGLGLI-GGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALLAE 79 (359)
T ss_pred CeEEEEEeCHH-HHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHHHH
Confidence 47999999886 9999999999998777776532 234556789999999998533 22
Q ss_pred -cCCCcCCCcEEEEeecC
Q 017679 290 -RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 290 -~~e~ik~gavVIDvg~n 306 (368)
.+..++++++|.|+|.-
T Consensus 80 l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 80 LADLELKPGVIVTDVGSV 97 (359)
T ss_pred HhhcCCCCCcEEEeCccc
Confidence 22147889999999975
No 159
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.48 E-value=0.0066 Score=59.28 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=55.5
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccC---CCEEEEecCCCCc----cc--
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR-- 290 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~---ADIVIsAvG~p~~----I~-- 290 (368)
++.+||.|.+ |.+++..|.+.|.+|++++++. .+.++.+++ +|+||++++.+.. +.
T Consensus 2 ~Ig~IGlG~m-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~~~i 80 (299)
T PRK12490 2 KLGLIGLGKM-GGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVIKDL 80 (299)
T ss_pred EEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHHHHH
Confidence 5899999986 9999999999999999998762 345555555 6999999986622 21
Q ss_pred CCCcCCCcEEEEeecC
Q 017679 291 GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 291 ~e~ik~gavVIDvg~n 306 (368)
...+++|.+|||++..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 1346789999999764
No 160
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=96.48 E-value=0.0037 Score=60.39 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=74.3
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-----------EEEEEeCCC-----------------
Q 017679 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-----------TVSIVHALT----------------- 266 (368)
Q Consensus 215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-----------tVti~h~~t----------------- 266 (368)
|-.|++..++-.+.+++..++++.|+|-+ |..++.+|...+. .+++++++-
T Consensus 8 ~lAgllnAlk~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~ 86 (254)
T cd00762 8 AVAGLLAALKVTKKKISEHKVLFNGAGAA-ALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLA 86 (254)
T ss_pred HHHHHHHHHHHhCCChhhcEEEEECcCHH-HHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHH
Confidence 45778889999999999999999999988 9999999877543 588887641
Q ss_pred ---------CCHhhhcc--CCCEEEEecCCCCcccCCCcCC------CcEEEEeecCC
Q 017679 267 ---------KNPEQITS--EADIVIAAAGVANLVRGSWLKP------GAVVLDVGTCP 307 (368)
Q Consensus 267 ---------~~L~~~~~--~ADIVIsAvG~p~~I~~e~ik~------gavVIDvg~n~ 307 (368)
.+|.+.++ ++|++|-..|.|+.+++|+++. .-+|+=+. ||
T Consensus 87 ~~~~~~~~~~~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS-NP 143 (254)
T cd00762 87 RFANPERESGDLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALS-NP 143 (254)
T ss_pred HHcCcccccCCHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECC-Cc
Confidence 25778888 9999999999999999998853 56777766 44
No 161
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=96.48 E-value=0.019 Score=58.89 Aligned_cols=94 Identities=23% Similarity=0.295 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHhC--CCCccceEEEEcc----------------CccchHHHHHHHhhCCCEEEEEeCCCC---------
Q 017679 215 TPKGCIELLIRSG--VEIMGKNAVVIGR----------------SNIVGLPTSLLLQRHHATVSIVHALTK--------- 267 (368)
Q Consensus 215 Ta~gv~~lL~~~~--i~l~GK~VvVIG~----------------g~~VGrpla~lL~~~gAtVti~h~~t~--------- 267 (368)
.|.-+++.+++.- -+++||+|+|.|+ ||.+|+.+|..|..+||+|+++++...
T Consensus 169 ~~~~I~~~~~~~~~~~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~ 248 (399)
T PRK05579 169 EPEEIVAAAERALSPKDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKR 248 (399)
T ss_pred CHHHHHHHHHHHhhhcccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEE
Confidence 4455555554332 4689999999998 776699999999999999999876521
Q ss_pred -------C----HhhhccCCCEEEEecCCCCccc----CCCcCCC--cEEEEeecCCC
Q 017679 268 -------N----PEQITSEADIVIAAAGVANLVR----GSWLKPG--AVVLDVGTCPV 308 (368)
Q Consensus 268 -------~----L~~~~~~ADIVIsAvG~p~~I~----~e~ik~g--avVIDvg~n~~ 308 (368)
+ +.+...+.|++|.++|...+-. ..-+|++ ...+.+--||+
T Consensus 249 ~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pd 306 (399)
T PRK05579 249 IDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPD 306 (399)
T ss_pred EccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcH
Confidence 1 1233467899999988655422 2234443 35677776663
No 162
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.47 E-value=0.0048 Score=62.69 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=58.5
Q ss_pred ccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCC---CCCHhhhccCCCEEEEecCCCC---ccc---C--CCcCCCc
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHAL---TKNPEQITSEADIVIAAAGVAN---LVR---G--SWLKPGA 298 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~---t~~L~~~~~~ADIVIsAvG~p~---~I~---~--e~ik~ga 298 (368)
.-.+|+|||-+|.+|..++..|.+. +.+|+.+.+. ..++.+.+++||+||.|++... ++. + ..+++|+
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~~~~~~~~v~~aDlVilavPv~~~~~~l~~l~~~~~~l~~~~ 82 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPGSLDPATLLQRADVLIFSAPIRHTAALIEEYVALAGGRAAGQ 82 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccccCCHHHHhcCCCEEEEeCCHHHHHHHHHHHhhhhcCCCCCe
Confidence 4568999998445699999999875 7789888653 3456778999999999998543 232 1 2379999
Q ss_pred EEEEeecC
Q 017679 299 VVLDVGTC 306 (368)
Q Consensus 299 vVIDvg~n 306 (368)
+|.|+|..
T Consensus 83 iVtDVgSv 90 (370)
T PRK08818 83 LWLDVTSI 90 (370)
T ss_pred EEEECCCC
Confidence 99999975
No 163
>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []. The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.
Probab=96.46 E-value=0.007 Score=59.83 Aligned_cols=76 Identities=21% Similarity=0.307 Sum_probs=46.9
Q ss_pred ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCC-
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~- 287 (368)
.-+++.|||.|.- |+.-+..|.. ++ -+|.+.+++. .+.++.+++|||||++|+...
T Consensus 127 ~~~~l~viGaG~Q-A~~~~~a~~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~ 205 (313)
T PF02423_consen 127 DARTLGVIGAGVQ-ARWHLRALAAVRPIKEVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTP 205 (313)
T ss_dssp T--EEEEE--SHH-HHHHHHHHHHHS--SEEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSE
T ss_pred CCceEEEECCCHH-HHHHHHHHHHhCCceEEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCC
Confidence 3468888888765 7766666554 34 3788887652 367889999999999999766
Q ss_pred --cccCCCcCCCcEEEEeecCC
Q 017679 288 --LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 --~I~~e~ik~gavVIDvg~n~ 307 (368)
+++.+|+++|+.|+-+|.+.
T Consensus 206 ~P~~~~~~l~~g~hi~~iGs~~ 227 (313)
T PF02423_consen 206 APVFDAEWLKPGTHINAIGSYT 227 (313)
T ss_dssp EESB-GGGS-TT-EEEE-S-SS
T ss_pred CccccHHHcCCCcEEEEecCCC
Confidence 48999999999999999763
No 164
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=96.45 E-value=0.057 Score=55.95 Aligned_cols=190 Identities=12% Similarity=0.037 Sum_probs=115.1
Q ss_pred eeecHHHHHHHHHHHHHHHHHHHHcC--C-----CCCEEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC--
Q 017679 76 VIDGKSIAEEIRSGIDKEVRRMKKSI--G-----KVPGLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT-- 146 (368)
Q Consensus 76 ildGk~ia~~i~~~i~~~v~~l~~~~--g-----~~P~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~-- 146 (368)
+|+-+.+..+=.+.|-+....+|+.. + ..-+....++ ..|...+-+ .=..++.++|..+.++.=+.+++
T Consensus 90 lLsi~Dls~~ei~~Ll~~A~~lK~~~~~~~~~~~L~GK~v~~lF-~epSTRTR~-SFE~A~~~LGg~~i~l~~~~~ss~~ 167 (429)
T PRK11891 90 LLSVDQFSRDSVEALFRVADVMQPIARRQKISRVLEGAVLGNLF-FEASTRTRV-SFGAAFCRLGGSVCDTTGFTFSSMA 167 (429)
T ss_pred ccchhhCCHHHHHHHHHHHHHHHHhhhcCccccccCCcEEEEEe-ccCCchhHH-HHHHHHHHcCCeEEEeCCccccCCC
Confidence 56666665544445555555554311 1 1113333333 234334443 55778899999988773222111
Q ss_pred -HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH-HHHHHH
Q 017679 147 -EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLI 224 (368)
Q Consensus 147 -~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~ 224 (368)
.|-+.+..+-|+.- +|+|.+-.| .|-...++.+.. .+-.+|.|- .+.+.||=+.+ ++.+.+
T Consensus 168 kGESi~DTarvLs~y--~D~IviR~~--~~~~~~e~A~~s-------~vPVINAgd------g~~~HPtQaLaDl~Ti~E 230 (429)
T PRK11891 168 KGESIYDTSRVMSGY--VDALVIRHP--EQGSVAEFARAT-------NLPVINGGD------GPGEHPSQALLDLYTIQR 230 (429)
T ss_pred CCCCHHHHHHHHHHh--CCEEEEeCC--chhHHHHHHHhC-------CCCEEECCC------CCCCCcHHHHHHHHHHHH
Confidence 23466666666553 788888865 333333333322 244556531 24567998888 555556
Q ss_pred HhCC---CCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeCC---------------------CCCHhhhccCCC
Q 017679 225 RSGV---EIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHAL---------------------TKNPEQITSEAD 277 (368)
Q Consensus 225 ~~~i---~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~~---------------------t~~L~~~~~~AD 277 (368)
+.+. .++|++|+++|-+ +-|.+.++.+|... |++|++++-. +.++.+.++.||
T Consensus 231 ~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~~d~~eav~~AD 310 (429)
T PRK11891 231 EFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALYRGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQTDDLAAGLRGAD 310 (429)
T ss_pred HhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHhcCCEEEEECCCccccCHHHHHHHHhcCCeEEEEcCHHHHhCCCC
Confidence 6542 4899999999986 45688888887775 9999998632 256778899999
Q ss_pred EEEEecC
Q 017679 278 IVIAAAG 284 (368)
Q Consensus 278 IVIsAvG 284 (368)
+|.+..+
T Consensus 311 VVYt~~~ 317 (429)
T PRK11891 311 VVYATRI 317 (429)
T ss_pred EEEEcCc
Confidence 9998554
No 165
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=96.44 E-value=0.0052 Score=60.07 Aligned_cols=73 Identities=16% Similarity=0.235 Sum_probs=56.2
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhccCCCEEEEecCCCCc----c-cCC---
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQITSEADIVIAAAGVANL----V-RGS--- 292 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~~~ADIVIsAvG~p~~----I-~~e--- 292 (368)
+|.+||.|.+ |.+++..|.+.|..|++++++. .+..+..+++|+||.++..+.- + ..+
T Consensus 2 ~Ig~IGlG~M-G~~ma~~L~~~G~~v~v~~~~~~~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIM-GTPMAINLARAGHQLHVTTIGPVADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCeEEEEeCCHhHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 5899999986 9999999999999999987642 2445667899999999985431 2 211
Q ss_pred -CcCCCcEEEEeecCC
Q 017679 293 -WLKPGAVVLDVGTCP 307 (368)
Q Consensus 293 -~ik~gavVIDvg~n~ 307 (368)
.+++|.+|||+++..
T Consensus 81 ~~~~~g~ivvd~sT~~ 96 (292)
T PRK15059 81 KASLKGKTIVDMSSIS 96 (292)
T ss_pred ccCCCCCEEEECCCCC
Confidence 357899999998653
No 166
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=96.41 E-value=0.073 Score=52.75 Aligned_cols=149 Identities=14% Similarity=0.191 Sum_probs=97.1
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679 118 SQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195 (368)
Q Consensus 118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~ 195 (368)
|..=--.=..++.++|.++.++.-... ..-|-+.+.++-|+.= ++|+|.+--| .|-...++.+. -.+-
T Consensus 56 STRTR~SFe~A~~~LGg~~i~l~~~~~~~~kgEs~~Dta~vls~y-~~D~iv~R~~--~~~~~~~~a~~-------~~vP 125 (305)
T PRK00856 56 STRTRLSFELAAKRLGADVINFSASTSSVSKGETLADTIRTLSAM-GADAIVIRHP--QSGAARLLAES-------SDVP 125 (305)
T ss_pred CcchHHHHHHHHHHcCCcEEEeCCCcccCCCCcCHHHHHHHHHhc-CCCEEEEeCC--ChHHHHHHHHH-------CCCC
Confidence 433334567889999998876532210 0123455555555541 3788988865 22222232222 1244
Q ss_pred cceeeeccccCCcCccccCCHHH-HHHHHHHhCCCCccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC-------
Q 017679 196 PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGVEIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL------- 265 (368)
Q Consensus 196 ~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~------- 265 (368)
.+|.|- .+...||=+.+ ++.+.++.| +++|++|++||-+ +.|.+.++.++...|++|++++-.
T Consensus 126 VINa~~------g~~~HPtQ~LaDl~Ti~e~~G-~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~~~~~~~ 198 (305)
T PRK00856 126 VINAGD------GSHQHPTQALLDLLTIREEFG-RLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPTLLPEGM 198 (305)
T ss_pred EEECCC------CCCCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcccCcccc
Confidence 556531 13467998888 555555555 6999999999986 457999999999999999999732
Q ss_pred -----CCCHhhhccCCCEEEEec
Q 017679 266 -----TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 266 -----t~~L~~~~~~ADIVIsAv 283 (368)
+.++.+.++.||+|.+-.
T Consensus 199 ~~~~~~~d~~ea~~~aDvvyt~~ 221 (305)
T PRK00856 199 PEYGVHTDLDEVIEDADVVMMLR 221 (305)
T ss_pred cceEEECCHHHHhCCCCEEEECC
Confidence 356788999999998754
No 167
>PLN02527 aspartate carbamoyltransferase
Probab=96.40 E-value=0.078 Score=52.57 Aligned_cols=151 Identities=13% Similarity=0.105 Sum_probs=98.6
Q ss_pred CcccHHHHHHHHHHHHHcCCeEEEEEcCC-CCC---HHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccc
Q 017679 115 RRDSQTYVRNKIKACEEVGIKSIVTEFAD-GCT---EDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKD 190 (368)
Q Consensus 115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~-~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KD 190 (368)
.|.-.+- -.=..++.++|.++.++.-.. +.+ .|-+.+.++-|+.= +|+|.+-.| .|-...++.+..
T Consensus 48 epStRTR-~SFe~A~~~LGg~~i~l~~~~~~s~~~kgEs~~Dta~vls~y--~D~iviR~~--~~~~~~~~a~~~----- 117 (306)
T PLN02527 48 EPSTRTR-LSFESAMKRLGGEVLTTENAGEFSSAAKGETLEDTIRTVEGY--SDIIVLRHF--ESGAARRAAATA----- 117 (306)
T ss_pred CCCchhH-HHHHHHHHHcCCCEEEeCCCCCccccCCCcCHHHHHHHHHHh--CcEEEEECC--ChhHHHHHHHhC-----
Confidence 4433444 356788999999988775431 111 35577777777663 789999865 333333333332
Q ss_pred cCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccC-c-cchHHHHHHHhhC-CCEEEEEeCC--
Q 017679 191 VDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRS-N-IVGLPTSLLLQRH-HATVSIVHAL-- 265 (368)
Q Consensus 191 VDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g-~-~VGrpla~lL~~~-gAtVti~h~~-- 265 (368)
.+-.+|.|- .....||=+.+=+--++++..+++|++|+++|-+ + -|.+.++..|... |++|++++-.
T Consensus 118 --~vPVINa~~------g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~~ 189 (306)
T PLN02527 118 --EIPVINAGD------GPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDVV 189 (306)
T ss_pred --CCCEEECCC------CCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCcc
Confidence 134456531 2346799888844444443346999999999976 3 2688888888776 8999998632
Q ss_pred -------------------CCCHhhhccCCCEEEEec
Q 017679 266 -------------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 266 -------------------t~~L~~~~~~ADIVIsAv 283 (368)
+.++++.++.||+|.+-.
T Consensus 190 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~ 226 (306)
T PLN02527 190 KMKDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTR 226 (306)
T ss_pred CCCHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECC
Confidence 246789999999999843
No 168
>PRK14031 glutamate dehydrogenase; Provisional
Probab=96.38 E-value=0.027 Score=58.55 Aligned_cols=52 Identities=25% Similarity=0.224 Sum_probs=43.6
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679 211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 263 (368)
Q Consensus 211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h 263 (368)
-.+.|.+|+... +++.+.+++||+|+|.|.|+ ||..++.+|.+.||+|+.+.
T Consensus 203 r~~aTg~Gv~~~~~~~~~~~g~~l~g~rVaVQGfGN-VG~~aA~~L~e~GAkVVaVS 258 (444)
T PRK14031 203 RPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGN-VAQYTAEKVLELGGKVVTMS 258 (444)
T ss_pred CCcccHHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEE
Confidence 347898886655 55678999999999999887 59999999999999988743
No 169
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=96.37 E-value=0.0038 Score=52.87 Aligned_cols=74 Identities=24% Similarity=0.274 Sum_probs=50.9
Q ss_pred eEEEEccCccchHHHHHHHhhCC-CE-EEEEeCCC---CCH-------------------hhhccCCCEEEEecCCC--C
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHH-AT-VSIVHALT---KNP-------------------EQITSEADIVIAAAGVA--N 287 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~g-At-Vti~h~~t---~~L-------------------~~~~~~ADIVIsAvG~p--~ 287 (368)
||.|||++|.+|+-+..+|+++- .+ +.++.++. +.+ .+.+.++|+||.|++.- .
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~~ 80 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGASK 80 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHHH
Confidence 68999988889999999999864 44 44444433 111 13468999999998742 1
Q ss_pred cccCCCcCCCcEEEEeecCC
Q 017679 288 LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 ~I~~e~ik~gavVIDvg~n~ 307 (368)
-+-+..+++|..|||.+...
T Consensus 81 ~~~~~~~~~g~~ViD~s~~~ 100 (121)
T PF01118_consen 81 ELAPKLLKAGIKVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHTTSEEEESSSTT
T ss_pred HHHHHHhhCCcEEEeCCHHH
Confidence 13334478899999998765
No 170
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.35 E-value=0.0072 Score=52.98 Aligned_cols=53 Identities=26% Similarity=0.419 Sum_probs=43.9
Q ss_pred eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC------------------------CCHhhhccCCCEEEEecCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT------------------------KNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t------------------------~~L~~~~~~ADIVIsAvG~p 286 (368)
||+|||+++.||..++.+|...+. ++.++.... .+..+.+++|||||.+.|.|
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 799999966789999999998873 788887662 24568899999999999976
No 171
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.35 E-value=0.0081 Score=57.05 Aligned_cols=60 Identities=12% Similarity=0.155 Sum_probs=45.2
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-CCH-----------------hhhccCCCEEEEecCCCCc
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-KNP-----------------EQITSEADIVIAAAGVANL 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~~L-----------------~~~~~~ADIVIsAvG~p~~ 288 (368)
++++|++|+|||.|.+ |.-=+..|++.||.||++.-.- +++ .+.+..+++||.||+.+.+
T Consensus 21 l~~~~~~VLVVGGG~V-A~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaATdD~~v 98 (223)
T PRK05562 21 LLSNKIKVLIIGGGKA-AFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIATDDEKL 98 (223)
T ss_pred EECCCCEEEEECCCHH-HHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECCCCHHH
Confidence 4567999999998775 7776778889999999995432 121 1346789999999987653
No 172
>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e.g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....
Probab=96.27 E-value=0.0059 Score=59.09 Aligned_cols=91 Identities=14% Similarity=0.243 Sum_probs=70.7
Q ss_pred CHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhC----CC-------EEEEEeCCC-----------------
Q 017679 215 TPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRH----HA-------TVSIVHALT----------------- 266 (368)
Q Consensus 215 Ta~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~----gA-------tVti~h~~t----------------- 266 (368)
|-.|++..++-.+.+|+..+++++|+|-+ |..++.+|... |. .+++++++-
T Consensus 8 ~lAgll~Al~~~g~~l~d~riv~~GAGsA-g~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a 86 (255)
T PF03949_consen 8 VLAGLLNALRVTGKKLSDQRIVFFGAGSA-GIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFA 86 (255)
T ss_dssp HHHHHHHHHHHHTS-GGG-EEEEEB-SHH-HHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHcEEEEeCCChh-HHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhh
Confidence 44678889999999999999999999987 99999888766 76 388997650
Q ss_pred ---------CCHhhhccCC--CEEEEecCCCCcccCCCcCC------CcEEEEeecCC
Q 017679 267 ---------KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVGTCP 307 (368)
Q Consensus 267 ---------~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik~------gavVIDvg~n~ 307 (368)
.+|.+.++++ |++|-..|.|+.+++|+++. .-+|+=+. ||
T Consensus 87 ~~~~~~~~~~~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LS-NP 143 (255)
T PF03949_consen 87 RKTNPEKDWGSLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLS-NP 143 (255)
T ss_dssp BSSSTTT--SSHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-S-SS
T ss_pred ccCcccccccCHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECC-CC
Confidence 2788999999 99999999999999998854 45777766 44
No 173
>TIGR03316 ygeW probable carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with purine catabolism.
Probab=96.25 E-value=0.084 Score=53.52 Aligned_cols=165 Identities=17% Similarity=0.114 Sum_probs=101.3
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCCCC---HHHHHHHHHHhhhccCccEEEEeCCCC---CCCCHH
Q 017679 106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADGCT---EDEVLNALSNYNQDSSINGILVQLPLP---QHLDEG 179 (368)
Q Consensus 106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~~---~~el~~~I~~LN~D~~V~GIlVqlPLp---~~id~~ 179 (368)
+....++= .|...+-. .=..++.++|.++.++.- .+++ -|-+.+.++-|+.- +|+|.+-.|-. .|-..+
T Consensus 43 k~v~~lF~-epSTRTR~-SFE~A~~~LGg~~i~l~~-~~s~~~kgEsl~Dtarvls~y--~D~Iv~R~~~~~~~~~~~l~ 117 (357)
T TIGR03316 43 GLGISLFR-DNSTRTRF-SFASAMNLLGLHAQDLDE-GKSQIGHGETVRETAEMISFF--ADGIGIRDDMYIGVGNAYMR 117 (357)
T ss_pred CEEEEEEc-CCCcchHH-HHHHHHHHcCCcEEEeCC-ccccCCCCCCHHHHHHHHHHh--CcEEEEeCCCccccccHHHH
Confidence 34444443 34333333 556788999999988753 2211 24566777777663 78999987642 222112
Q ss_pred HHHhcCC-cccc-cC--ccCcceeeeccccCCcCccccCCHHH-HHHHHHHhCC--CCccceEEEEcc-------Cccch
Q 017679 180 KILDAVS-LEKD-VD--GFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIGR-------SNIVG 245 (368)
Q Consensus 180 ~il~~I~-p~KD-VD--gl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i--~l~GK~VvVIG~-------g~~VG 245 (368)
++.+... --|| |- .+-.+|.| ...+.||=+.+ ++.+.++.|. .++|++|+++|. +..|.
T Consensus 118 ~~a~~~~~~~~~~~~~s~vPVINa~-------~~~~HPtQaLaDl~Ti~e~~G~~~~l~g~kvai~~~~d~~~gr~~~v~ 190 (357)
T TIGR03316 118 EVAKYVQEGYKDGVLEQRPPLVNLQ-------CDIDHPTQAMADIMTLQEKFGGIENLKGKKFAMTWAYSPSYGKPLSVP 190 (357)
T ss_pred HHHHhhhhccccccccCCCCEEECC-------CCCCCchHHHHHHHHHHHHhCCccccCCCEEEEEeccccccCccchHH
Confidence 3333311 1122 10 13345653 23467998888 5555556663 489999999964 33567
Q ss_pred HHHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEe
Q 017679 246 LPTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 246 rpla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsA 282 (368)
+.++.++...|++|++++-. +.++.+.+++||+|.+-
T Consensus 191 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~ 252 (357)
T TIGR03316 191 QGIIGLMTRFGMDVTLAHPEGYHLLPEVIEVAKKNAAENGGKFNIVNSMDEAFKDADIVYPK 252 (357)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 88888899999999999743 13566788999998865
No 174
>PRK08192 aspartate carbamoyltransferase; Provisional
Probab=96.24 E-value=0.08 Score=53.25 Aligned_cols=151 Identities=15% Similarity=0.066 Sum_probs=95.8
Q ss_pred CcccHHHHHHHHHHHHHcCCeEEEEEcCCCC---CHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCccccc
Q 017679 115 RRDSQTYVRNKIKACEEVGIKSIVTEFADGC---TEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDV 191 (368)
Q Consensus 115 d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~~---~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDV 191 (368)
.|.-.+.+ .=..++.++|.++.++.=+.++ ..|-+.+.++-|+.- +|+|.+-.| .|-...++.+..
T Consensus 53 epSTRTR~-SFe~A~~~LGg~~i~~~~~~~s~~~kgEsl~Dtarvls~y--~D~IviR~~--~~~~~~~~a~~~------ 121 (338)
T PRK08192 53 EPSTRTRV-SFGCAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHP--DAGSVKEFAEGS------ 121 (338)
T ss_pred CCCcchHH-HHHHHHHHcCCcEEeecCcccccCCCCCCHHHHHHHHHHc--CCEEEEeCC--chhHHHHHHHhC------
Confidence 35445544 4567899999998754222221 124566666666653 789999865 323333333321
Q ss_pred CccCcceeeeccccCCcCccccCCHHH-HHHHHHHh---CCCCccceEEEEccC--ccchHHHHHHHhhC-CCEEEEEeC
Q 017679 192 DGFHPLNIGNLAMRGREPLFIPCTPKG-CIELLIRS---GVEIMGKNAVVIGRS--NIVGLPTSLLLQRH-HATVSIVHA 264 (368)
Q Consensus 192 Dgl~~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~---~i~l~GK~VvVIG~g--~~VGrpla~lL~~~-gAtVti~h~ 264 (368)
.+-.+|.|. .+.+.||=+.+ ++.+.++. |-+++|++|++||-+ +-|...++.+|... |++|++++-
T Consensus 122 -~vPVINa~~------g~~~HPtQaLaDl~Ti~e~~~~~g~~l~g~kia~vGD~~~~rv~~Sl~~~l~~~~g~~v~~~~P 194 (338)
T PRK08192 122 -RVPVINGGD------GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKNVSFTLVSP 194 (338)
T ss_pred -CCCEEECCC------CCCCCcHHHHHHHHHHHHHhhccCCCcCCCEEEEECcCCCCchHHHHHHHHHHhcCCEEEEECC
Confidence 134556431 13567998888 45554543 347999999999986 44577777666644 899998863
Q ss_pred C---------------------CCCHhhhccCCCEEEEec
Q 017679 265 L---------------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 265 ~---------------------t~~L~~~~~~ADIVIsAv 283 (368)
. +.++.+.+++||+|.+..
T Consensus 195 ~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 234 (338)
T PRK08192 195 KELAMPDYVISDIENAGHKITITDQLEGNLDKADILYLTR 234 (338)
T ss_pred ccccCCHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEEcC
Confidence 2 246778999999999853
No 175
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=96.22 E-value=0.0085 Score=61.82 Aligned_cols=123 Identities=20% Similarity=0.146 Sum_probs=74.5
Q ss_pred CccceEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCc-CCCcEEEEeecCC
Q 017679 230 IMGKNAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCP 307 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~n~ 307 (368)
.++|+++|+|.|+. |+. +|.+|.++|++|+++..+.....+.+++..+.+.. |.+ .+.+ ....+|+--|+++
T Consensus 5 ~~~~~v~viG~G~s-G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~-~~~----~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 5 RRIKRIHFVGIGGI-GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFI-GHD----AENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCCCEEEEEEEchh-hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHCCCCCEEEECCCCCC
Confidence 47899999999998 999 79999999999999987543222234443443322 221 1122 1245565555554
Q ss_pred CCCCCCCCCCCCcEEEcccchhh-hhc--cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 308 VDVSVDPSCEYGYRLMGDVCYEE-AMR--LASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 308 ~~~~~d~t~~~~~kl~GDVd~~~-~~~--~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.......-.+.+-++.++.++-. ..+ ..- -|-|=-|.-|+..|+.++++.+
T Consensus 79 ~~~~~~~a~~~~i~i~~~~e~~~~~~~~~~~I---~ITGTnGKTTTt~ll~~iL~~~ 132 (461)
T PRK00421 79 DNPELVAARELGIPVVRRAEMLAELMRFRTSI---AVAGTHGKTTTTSLLAHVLAEA 132 (461)
T ss_pred CCHHHHHHHHCCCcEEeHHHHHHHHHccCcEE---EEECCCCHHHHHHHHHHHHHhc
Confidence 31000000011336888888732 211 223 3447778999999999999765
No 176
>PRK13529 malate dehydrogenase; Provisional
Probab=96.20 E-value=0.022 Score=60.56 Aligned_cols=139 Identities=14% Similarity=0.172 Sum_probs=95.8
Q ss_pred HHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhC
Q 017679 148 DEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG 227 (368)
Q Consensus 148 ~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~ 227 (368)
+|+.++++++- |++ +||+==.+.-+--++++... +++-.|| +...|---++-.|++..++-.+
T Consensus 228 defv~av~~~~--P~~---~I~~EDf~~~~af~iL~ryr--~~i~~Fn----------DDiQGTaaV~LAgll~A~r~~g 290 (563)
T PRK13529 228 DEFVQAVKRRF--PNA---LLQFEDFAQKNARRILERYR--DEICTFN----------DDIQGTGAVTLAGLLAALKITG 290 (563)
T ss_pred HHHHHHHHHhC--CCe---EEehhhcCCchHHHHHHHhc--cCCCeec----------cccchHHHHHHHHHHHHHHHhC
Confidence 56777776665 443 55542222223344444432 2333332 1123333456688999999999
Q ss_pred CCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCCC------------------------------
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHALT------------------------------ 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~t------------------------------ 266 (368)
.+++..++++.|+|.+ |..+|.+|.. +|. .+++|+++-
T Consensus 291 ~~l~d~riv~~GAGsA-giGia~ll~~~~~~~Gl~~eeA~~~i~~vD~~GLl~~~r~~l~~~k~~fa~~~~~~~~~~~~~ 369 (563)
T PRK13529 291 EPLSDQRIVFLGAGSA-GCGIADQIVAAMVREGLSEEEARKRFFMVDRQGLLTDDMPDLLDFQKPYARKREELADWDTEG 369 (563)
T ss_pred CChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCcchHHHHHHhhhccccccccccc
Confidence 9999999999999988 9999999886 575 688887640
Q ss_pred --CCHhhhccCC--CEEEEecCCCCcccCCCcCC------CcEEEEee
Q 017679 267 --KNPEQITSEA--DIVIAAAGVANLVRGSWLKP------GAVVLDVG 304 (368)
Q Consensus 267 --~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik~------gavVIDvg 304 (368)
.+|.+.++.+ |++|-..|.|+.+++++++. .-+|+=++
T Consensus 370 ~~~~L~e~v~~~kPtvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 417 (563)
T PRK13529 370 DVISLLEVVRNVKPTVLIGVSGQPGAFTEEIVKEMAAHCERPIIFPLS 417 (563)
T ss_pred CCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC
Confidence 2577888888 99999999899999988754 56776666
No 177
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.19 E-value=0.01 Score=61.43 Aligned_cols=72 Identities=21% Similarity=0.319 Sum_probs=55.1
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------CHhhhccCCCEEEEecCCCC---ccc--CCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------NPEQITSEADIVIAAAGVAN---LVR--GSW 293 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~L~~~~~~ADIVIsAvG~p~---~I~--~e~ 293 (368)
++.|||..|.+|..++..|.+.|..|+++.++.. +..+.+.+||+||.+++... .+. ...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl~~l~~~ 81 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVIKEVAPH 81 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHHHHHHhh
Confidence 6899984334599999999999999999876532 44566789999999997432 221 245
Q ss_pred cCCCcEEEEeec
Q 017679 294 LKPGAVVLDVGT 305 (368)
Q Consensus 294 ik~gavVIDvg~ 305 (368)
+++|++|+|++.
T Consensus 82 l~~~~iViDvsS 93 (437)
T PRK08655 82 VKEGSLLMDVTS 93 (437)
T ss_pred CCCCCEEEEccc
Confidence 788999999996
No 178
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.19 E-value=0.0086 Score=62.53 Aligned_cols=126 Identities=20% Similarity=0.178 Sum_probs=66.8
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPV 308 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~ 308 (368)
+.||+|+|+|.|.. |++++.+|.++|++|+++......+.. +++..+-+...+.+ .+.++ .+.+|.--|+++.
T Consensus 10 ~~~~~v~V~G~G~s-G~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~----~~~l~~~D~VV~SpGi~~~ 83 (488)
T PRK03369 10 LPGAPVLVAGAGVT-GRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDA----VQQIADYALVVTSPGFRPT 83 (488)
T ss_pred cCCCeEEEEcCCHH-HHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcch----HhHhhcCCEEEECCCCCCC
Confidence 37899999999997 999999999999999998855322221 22111111110000 01111 1223333333321
Q ss_pred CCCCCCCCCCCcEEEcccchhhhhccc------eEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 309 DVSVDPSCEYGYRLMGDVCYEEAMRLA------SVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 309 ~~~~d~t~~~~~kl~GDVd~~~~~~~a------~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.+....-.+.+-+++|++++....... ..+--|-|-.|.-|+.-|+.++++.+
T Consensus 84 ~p~~~~a~~~gi~v~~~iel~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~ 142 (488)
T PRK03369 84 APVLAAAAAAGVPIWGDVELAWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAA 142 (488)
T ss_pred CHHHHHHHHCCCcEeeHHHHhhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 100000001123577877763211000 01113558889999999999998764
No 179
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.17 E-value=0.0095 Score=60.83 Aligned_cols=37 Identities=27% Similarity=0.432 Sum_probs=33.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+|+|+|.|. +|.++|..|+++|++|+++.+..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 46899999999999 59999999999999999998764
No 180
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.14 E-value=0.0099 Score=58.54 Aligned_cols=72 Identities=17% Similarity=0.175 Sum_probs=55.7
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEecC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG 284 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAvG 284 (368)
.+|.|||.|.+ |.+++..|++.|..|++++++. .++.+.++++|+||.++.
T Consensus 5 m~I~iIG~G~m-G~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~ 83 (328)
T PRK14618 5 MRVAVLGAGAW-GTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP 83 (328)
T ss_pred CeEEEECcCHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence 47999999876 9999999999999999998742 134456788999999997
Q ss_pred CCCccc-CCCcCCCcEEEEeec
Q 017679 285 VANLVR-GSWLKPGAVVLDVGT 305 (368)
Q Consensus 285 ~p~~I~-~e~ik~gavVIDvg~ 305 (368)
...+-. -+.++++.++||+..
T Consensus 84 ~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 84 SKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred hHHHHHHHHhcCcCCEEEEEee
Confidence 654311 134678889999864
No 181
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=96.14 E-value=0.15 Score=50.46 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=97.5
Q ss_pred cHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccC
Q 017679 118 SQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFH 195 (368)
Q Consensus 118 S~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~ 195 (368)
|.-=--.=..++.++|.++.++.-... ...|.+.+.++-|+.- +|+|.+-.|- +-....+.+. -++-
T Consensus 54 STRTR~SFe~A~~~LGg~~i~l~~~~ss~~kgEsl~Dt~~~l~~~--~D~iv~R~~~--~~~~~~~a~~-------~~vP 122 (304)
T PRK00779 54 STRTRVSFEVGMAQLGGHAIFLSPRDTQLGRGEPIEDTARVLSRY--VDAIMIRTFE--HETLEELAEY-------STVP 122 (304)
T ss_pred CchHHHHHHHHHHHcCCcEEEECcccccCCCCcCHHHHHHHHHHh--CCEEEEcCCC--hhHHHHHHHh-------CCCC
Confidence 433334567899999998887643211 0134577777777764 7888887652 2222222222 2245
Q ss_pred cceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------
Q 017679 196 PLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------- 265 (368)
Q Consensus 196 ~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------- 265 (368)
.+|.|. ....||=+.+=+--++++...++|++++++|..+-|.+.++.+|...|++|++|+-.
T Consensus 123 VINag~-------~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~ 195 (304)
T PRK00779 123 VINGLT-------DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIVE 195 (304)
T ss_pred EEeCCC-------CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccCCCHHHHH
Confidence 667642 235688777744444443346999999999986668999999999999999999632
Q ss_pred ------------CCCHhhhccCCCEEEEe
Q 017679 266 ------------TKNPEQITSEADIVIAA 282 (368)
Q Consensus 266 ------------t~~L~~~~~~ADIVIsA 282 (368)
+.++.+.+++||+|.+-
T Consensus 196 ~~~~~~g~~~~~~~d~~~a~~~aDvvy~~ 224 (304)
T PRK00779 196 KIAKETGASIEVTHDPKEAVKGADVVYTD 224 (304)
T ss_pred HHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 24667889999999975
No 182
>PRK12491 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.13 E-value=0.0093 Score=57.83 Aligned_cols=71 Identities=18% Similarity=0.267 Sum_probs=52.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC----EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCcc----
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA----TVSIVHALT---------------KNPEQITSEADIVIAAAGVANLV---- 289 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA----tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~I---- 289 (368)
+++.+||.|.+ |.+++..|.+.|. +|++++++. .+..+.+++||+||.++. |..+
T Consensus 3 ~~IgfIG~G~M-G~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavk-P~~~~~vl 80 (272)
T PRK12491 3 KQIGFIGCGNM-GIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIK-PDLYSSVI 80 (272)
T ss_pred CeEEEECccHH-HHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeC-hHHHHHHH
Confidence 47999999886 9999999998773 688887642 234456789999999997 4422
Q ss_pred c--CCCcCCCcEEEEeec
Q 017679 290 R--GSWLKPGAVVLDVGT 305 (368)
Q Consensus 290 ~--~e~ik~gavVIDvg~ 305 (368)
. .+.++++.+|||+.-
T Consensus 81 ~~l~~~~~~~~lvISi~A 98 (272)
T PRK12491 81 NQIKDQIKNDVIVVTIAA 98 (272)
T ss_pred HHHHHhhcCCcEEEEeCC
Confidence 1 134677889999863
No 183
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.12 E-value=0.009 Score=58.37 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=54.9
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------CH---hhhccCCCEEEEecCCCC---ccc--C
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------NP---EQITSEADIVIAAAGVAN---LVR--G 291 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------~L---~~~~~~ADIVIsAvG~p~---~I~--~ 291 (368)
+|.|||.|.. |.+++..|.+.|.+|++.+++.. ++ .+.+.++|+||.++.... .+. .
T Consensus 2 ~Ig~IGlG~m-G~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRM-GANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVLEELA 80 (298)
T ss_pred EEEEEcchHH-HHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHHHHHH
Confidence 6899999886 99999999999999999887631 22 234567899999987642 121 1
Q ss_pred CCcCCCcEEEEeecCC
Q 017679 292 SWLKPGAVVLDVGTCP 307 (368)
Q Consensus 292 e~ik~gavVIDvg~n~ 307 (368)
..+++|.+|||++...
T Consensus 81 ~~l~~g~ivid~st~~ 96 (298)
T TIGR00872 81 PTLEKGDIVIDGGNSY 96 (298)
T ss_pred hhCCCCCEEEECCCCC
Confidence 3468899999998653
No 184
>PRK08507 prephenate dehydrogenase; Validated
Probab=96.12 E-value=0.012 Score=56.64 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=51.9
Q ss_pred eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC---------------CCHhhhccCCCEEEEecCCCCc---cc--C
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT---------------KNPEQITSEADIVIAAAGVANL---VR--G 291 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t---------------~~L~~~~~~ADIVIsAvG~p~~---I~--~ 291 (368)
++.|||.|.+ |.+++..|.+.|. +|++++++. .+..+ +.+||+||.+++.... +. .
T Consensus 2 ~I~iIG~G~m-G~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~-~~~aD~Vilavp~~~~~~~~~~l~ 79 (275)
T PRK08507 2 KIGIIGLGLM-GGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEE-LKKCDVIFLAIPVDAIIEILPKLL 79 (275)
T ss_pred EEEEEccCHH-HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHH-HhcCCEEEEeCcHHHHHHHHHHHh
Confidence 6899999876 9999999998885 788777642 23344 3459999999985432 21 1
Q ss_pred CCcCCCcEEEEeecC
Q 017679 292 SWLKPGAVVLDVGTC 306 (368)
Q Consensus 292 e~ik~gavVIDvg~n 306 (368)
. ++++.+|+|+|..
T Consensus 80 ~-l~~~~iv~d~gs~ 93 (275)
T PRK08507 80 D-IKENTTIIDLGST 93 (275)
T ss_pred c-cCCCCEEEECccc
Confidence 2 7889999999875
No 185
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.11 E-value=0.014 Score=56.89 Aligned_cols=73 Identities=19% Similarity=0.252 Sum_probs=55.2
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccC---CCEEEEecCCCCc----cc--
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSE---ADIVIAAAGVANL----VR-- 290 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~---ADIVIsAvG~p~~----I~-- 290 (368)
+|.|||.|.+ |.+++..|++.|.+|++++++. .+..+.++. +|+||+++..... +.
T Consensus 2 ~Ig~IGlG~M-G~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~~~l 80 (301)
T PRK09599 2 QLGMIGLGRM-GGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATIDEL 80 (301)
T ss_pred EEEEEcccHH-HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHHHHH
Confidence 6899999986 9999999999999999998763 234444544 6999999876532 21
Q ss_pred CCCcCCCcEEEEeecCC
Q 017679 291 GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 291 ~e~ik~gavVIDvg~n~ 307 (368)
.+.+++|.++||.+...
T Consensus 81 ~~~l~~g~ivid~st~~ 97 (301)
T PRK09599 81 APLLSPGDIVIDGGNSY 97 (301)
T ss_pred HhhCCCCCEEEeCCCCC
Confidence 23567899999997643
No 186
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.10 E-value=0.014 Score=59.51 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=70.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---HhhhccCCCEEEEecCC-CCcccCCCcC--CCcEEEE
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITSEADIVIAAAGV-ANLVRGSWLK--PGAVVLD 302 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---L~~~~~~ADIVIsAvG~-p~~I~~e~ik--~gavVID 302 (368)
+++||+++|+|.|+ .|+.+|..|+++|++|+++.++... ..+.+....+-+. .|. +. +.+. ...+|.-
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~-~~~~~~----~~~~~~~d~vV~s 75 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI-CGSHPL----ELLDEDFDLMVKN 75 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE-eCCCCH----HHhcCcCCEEEEC
Confidence 36799999999999 5999999999999999999765321 1122222222111 111 10 0111 2334444
Q ss_pred eecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 303 VGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 303 vg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
-|+++.......-.+.+-+++++.++....... .+--|-|--|.-|+..|+.++++.+
T Consensus 76 ~gi~~~~~~~~~a~~~~i~v~~~~el~~~~~~~-~~I~VTGT~GKTTTt~ll~~iL~~~ 133 (447)
T PRK02472 76 PGIPYTNPMVEKALEKGIPIITEVELAYLISEA-PIIGITGSNGKTTTTTLIGEMLKAG 133 (447)
T ss_pred CCCCCCCHHHHHHHHCCCcEEeHHHHHHHhcCC-CEEEEeCCCchHHHHHHHHHHHHHC
Confidence 444432100000001133577877763221111 1224568889999999999998764
No 187
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.09 E-value=0.0089 Score=51.94 Aligned_cols=72 Identities=22% Similarity=0.282 Sum_probs=47.8
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc------c
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL------V 289 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~------I 289 (368)
--+|.|||+|++ |..++.+|.+.|..|.-+.+++ .++.+.+++||++|-+++--.+ +
T Consensus 10 ~l~I~iIGaGrV-G~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDdaI~~va~~L 88 (127)
T PF10727_consen 10 RLKIGIIGAGRV-GTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDDAIAEVAEQL 88 (127)
T ss_dssp --EEEEECTSCC-CCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CCHHHHHHHHH
T ss_pred ccEEEEECCCHH-HHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechHHHHHHHHHH
Confidence 358999999985 9999999999999988887653 2456778999999999974321 2
Q ss_pred -cCCCcCCCcEEEEee
Q 017679 290 -RGSWLKPGAVVLDVG 304 (368)
Q Consensus 290 -~~e~ik~gavVIDvg 304 (368)
....+++|.+|+=+.
T Consensus 89 a~~~~~~~g~iVvHtS 104 (127)
T PF10727_consen 89 AQYGAWRPGQIVVHTS 104 (127)
T ss_dssp HCC--S-TT-EEEES-
T ss_pred HHhccCCCCcEEEECC
Confidence 222467888887654
No 188
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.09 E-value=0.012 Score=56.77 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=53.2
Q ss_pred cceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL--- 288 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~--- 288 (368)
+.++.+||.|.. |.+++..|.+.| ..|++++++. .+..+.+++||+||.++....+
T Consensus 3 ~mkI~~IG~G~m-G~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~v 81 (279)
T PRK07679 3 IQNISFLGAGSI-AEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEA 81 (279)
T ss_pred CCEEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence 458999999886 999999999887 5788887742 1334567899999999974332
Q ss_pred cc--CCCcCCCcEEEEe
Q 017679 289 VR--GSWLKPGAVVLDV 303 (368)
Q Consensus 289 I~--~e~ik~gavVIDv 303 (368)
+. .+.++++.+|||+
T Consensus 82 l~~l~~~~~~~~liIs~ 98 (279)
T PRK07679 82 LIPFKEYIHNNQLIISL 98 (279)
T ss_pred HHHHHhhcCCCCEEEEE
Confidence 21 1346778999997
No 189
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=96.07 E-value=0.012 Score=58.97 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=53.8
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCC---ccc--
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVAN---LVR-- 290 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~---~I~-- 290 (368)
++||+|.|||.|.+ |+++|..|...|.+|.+..+.. .+..+.+++||+|+.+++... ++.
T Consensus 15 L~gktIgIIG~Gsm-G~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 15 IKGKKVAIIGYGSQ-GHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hCCCEEEEEeeHHH-HHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 68999999999986 9999999999999998876542 256678899999999997322 221
Q ss_pred -CCCcCCCcEE
Q 017679 291 -GSWLKPGAVV 300 (368)
Q Consensus 291 -~e~ik~gavV 300 (368)
...+++|++|
T Consensus 94 I~~~Lk~g~iL 104 (330)
T PRK05479 94 IEPNLKEGAAL 104 (330)
T ss_pred HHhcCCCCCEE
Confidence 1346778765
No 190
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.07 E-value=0.012 Score=57.15 Aligned_cols=71 Identities=18% Similarity=0.302 Sum_probs=53.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------CCHhhhccCCCEEEEecC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------KNPEQITSEADIVIAAAG 284 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------~~L~~~~~~ADIVIsAvG 284 (368)
.+|.|||.|.+ |.+++..|++.|.+|+++++.. .+..+.++++|+||.++.
T Consensus 2 mkI~iiG~G~m-G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (325)
T PRK00094 2 MKIAVLGAGSW-GTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP 80 (325)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence 37999999875 9999999999999999997642 133456679999999998
Q ss_pred CCCc---cc--CCCcCCCcEEEEee
Q 017679 285 VANL---VR--GSWLKPGAVVLDVG 304 (368)
Q Consensus 285 ~p~~---I~--~e~ik~gavVIDvg 304 (368)
.... +. ...++++.+||++.
T Consensus 81 ~~~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 81 SQALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 6432 11 13567889999993
No 191
>PRK07589 ornithine cyclodeaminase; Validated
Probab=96.04 E-value=0.015 Score=58.52 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=55.9
Q ss_pred ccceEEEEccCccchHHHHHHHhh-CC-CEEEEEeCCC--------------------CCHhhhccCCCEEEEecCCCC-
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR-HH-ATVSIVHALT--------------------KNPEQITSEADIVIAAAGVAN- 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~-~g-AtVti~h~~t--------------------~~L~~~~~~ADIVIsAvG~p~- 287 (368)
.-+++.|||.|.- ++.-+..+.. +. -+|++.+++. .++++.+++||||+++|++..
T Consensus 128 da~~l~iiGaG~Q-A~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~ 206 (346)
T PRK07589 128 DSRTMALIGNGAQ-SEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTN 206 (346)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCC
Confidence 3467888888765 7665554443 23 3677776652 357788999999999998643
Q ss_pred --cccCCCcCCCcEEEEeecCC
Q 017679 288 --LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 --~I~~e~ik~gavVIDvg~n~ 307 (368)
+++.+|++||+.|.=+|.+.
T Consensus 207 ~Pvl~~~~lkpG~hV~aIGs~~ 228 (346)
T PRK07589 207 ATILTDDMVEPGMHINAVGGDC 228 (346)
T ss_pred CceecHHHcCCCcEEEecCCCC
Confidence 47999999999999999653
No 192
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.02 E-value=0.016 Score=59.03 Aligned_cols=72 Identities=28% Similarity=0.330 Sum_probs=54.7
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC----------------------------------CHhhhccCCCEE
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK----------------------------------NPEQITSEADIV 279 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~----------------------------------~L~~~~~~ADIV 279 (368)
+|.|||.|.+ |.++|..|++.|.+|++++++.. ++.+.+++||+|
T Consensus 2 kI~vIGlG~~-G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advv 80 (411)
T TIGR03026 2 KIAVIGLGYV-GLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVI 80 (411)
T ss_pred EEEEECCCch-hHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEE
Confidence 6899999875 99999999999999999976421 223457889999
Q ss_pred EEecCCCCc---------cc------CCCcCCCcEEEEeecC
Q 017679 280 IAAAGVANL---------VR------GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 280 IsAvG~p~~---------I~------~e~ik~gavVIDvg~n 306 (368)
|.+++.|.- +. ...+++|.+|||.++-
T Consensus 81 ii~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~STv 122 (411)
T TIGR03026 81 IICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLESTV 122 (411)
T ss_pred EEEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCcC
Confidence 999997731 11 1245789999998753
No 193
>PRK07200 aspartate/ornithine carbamoyltransferase family protein; Validated
Probab=96.01 E-value=0.18 Score=51.86 Aligned_cols=167 Identities=16% Similarity=0.146 Sum_probs=103.5
Q ss_pred EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC--CCHHHHHHHHHHhhhccCccEEEEeCCC---CCCCCHHH
Q 017679 106 GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG--CTEDEVLNALSNYNQDSSINGILVQLPL---PQHLDEGK 180 (368)
Q Consensus 106 ~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~--~~~~el~~~I~~LN~D~~V~GIlVqlPL---p~~id~~~ 180 (368)
++++.++= .|...+- -.=..++.++|.++.++.-... ..-|-+.+.++-|+.- +|+|.+-.|- ..|-...+
T Consensus 60 ~~~~~lF~-epSTRTR-~SFE~A~~~LGg~~i~l~~~~ss~~kGEsl~DTarvLs~y--~D~IviR~~~~~g~~~~~~~e 135 (395)
T PRK07200 60 GLGISVFR-DNSTRTR-FSYASACNLLGLEVQDLDEGKSQIAHGETVRETANMISFM--ADVIGIRDDMYIGKGNAYMRE 135 (395)
T ss_pred CeEEEEEc-CCCchhH-HHHHHHHHHcCCCEEEcCCccccCCCCCCHHHHHHHHHHh--CCEEEEecCcccccccHHHHH
Confidence 44443443 3433333 3557889999999887743211 0124566777777663 8999998774 22222233
Q ss_pred HHhcCCc--cccc-CccC-cceeeeccccCCcCccccCCHHH-HHHHHHHhCC--CCccceEEEEc-------cCccchH
Q 017679 181 ILDAVSL--EKDV-DGFH-PLNIGNLAMRGREPLFIPCTPKG-CIELLIRSGV--EIMGKNAVVIG-------RSNIVGL 246 (368)
Q Consensus 181 il~~I~p--~KDV-Dgl~-~~N~G~L~~g~~~~~~~PcTa~g-v~~lL~~~~i--~l~GK~VvVIG-------~g~~VGr 246 (368)
+.+...- .++| -..- .+|.+ .+...||=+.+ ++.+.++.|- .++|++|+++| ++..|.+
T Consensus 136 la~~~~~~~~~~~~~~~pPVINa~-------~~~~HPtQaLaDl~TI~E~~G~~~~l~g~kVaivg~~~~~~g~~~~Va~ 208 (395)
T PRK07200 136 VGAAVDDGYKQGVLPQRPTLVNLQ-------CDIDHPTQSMADLLHLIEHFGGLENLKGKKIAMTWAYSPSYGKPLSVPQ 208 (395)
T ss_pred HHHHhhhhcccccccCCCeEEECC-------CCCCCcHHHHHHHHHHHHHhCCCcccCCCEEEEEeccccccCCcchHHH
Confidence 3222211 0111 1222 25652 23467998888 5555566653 38999999985 4556789
Q ss_pred HHHHHHhhCCCEEEEEeCC-------------------------CCCHhhhccCCCEEEEec
Q 017679 247 PTSLLLQRHHATVSIVHAL-------------------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 247 pla~lL~~~gAtVti~h~~-------------------------t~~L~~~~~~ADIVIsAv 283 (368)
.++.+|...|++|++++-. +.++.+.++.||+|.+-+
T Consensus 209 Sl~~~~~~lG~~v~~~~P~~~~~~~~i~~~a~~~~~~~G~~i~~~~d~~eav~~aDvVYtd~ 270 (395)
T PRK07200 209 GIIGLMTRFGMDVTLAHPEGYDLMPEVVEVAKKNAKASGGSFRQVNSMEEAFKDADIVYPKS 270 (395)
T ss_pred HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 9999999999999998633 246778899999999753
No 194
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.00 E-value=0.015 Score=57.11 Aligned_cols=53 Identities=21% Similarity=0.362 Sum_probs=42.3
Q ss_pred ceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCCC-------C-----------------HhhhccCCCEEEEecCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-------N-----------------PEQITSEADIVIAAAGVA 286 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t~-------~-----------------L~~~~~~ADIVIsAvG~p 286 (368)
++|.|||+|++ |..++..|+.+| .+|++++++.. + -.+.+++||+||.++|.|
T Consensus 1 ~kI~IIGaG~v-G~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~ 79 (306)
T cd05291 1 RKVVIIGAGHV-GSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP 79 (306)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence 47999999875 999999999998 37999986421 1 124578999999999976
No 195
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.00 E-value=0.013 Score=56.76 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=54.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC--------------------------------------CCCHhhhcc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL--------------------------------------TKNPEQITS 274 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~--------------------------------------t~~L~~~~~ 274 (368)
++|.|||.|.+ |.++|..|++.|.+|+++++. +.++.+.++
T Consensus 2 ~~V~VIG~G~m-G~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGAGVM-GRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECccHH-HHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999875 999999999999999999754 124556789
Q ss_pred CCCEEEEecCCCCccc-------CCCcCCCcEE-EEeecC
Q 017679 275 EADIVIAAAGVANLVR-------GSWLKPGAVV-LDVGTC 306 (368)
Q Consensus 275 ~ADIVIsAvG~p~~I~-------~e~ik~gavV-IDvg~n 306 (368)
+||+||.+++...-++ .+.+++++++ +|.++-
T Consensus 81 ~aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~ 120 (288)
T PRK09260 81 DADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTM 120 (288)
T ss_pred CCCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCC
Confidence 9999999998543121 2356778755 666653
No 196
>PLN02688 pyrroline-5-carboxylate reductase
Probab=95.96 E-value=0.016 Score=55.15 Aligned_cols=68 Identities=15% Similarity=0.217 Sum_probs=50.1
Q ss_pred eEEEEccCccchHHHHHHHhhCCC----EEEEE-eCCC--------------CCHhhhccCCCEEEEecCCCCcc----c
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA----TVSIV-HALT--------------KNPEQITSEADIVIAAAGVANLV----R 290 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA----tVti~-h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I----~ 290 (368)
+|.+||.|.+ |.+++..|.+.|. +|+++ +++. .+..+.++++|+||.++ .|..+ .
T Consensus 2 kI~~IG~G~m-G~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v-~~~~~~~vl~ 79 (266)
T PLN02688 2 RVGFIGAGKM-AEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAV-KPQVVKDVLT 79 (266)
T ss_pred eEEEECCcHH-HHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEE-CcHHHHHHHH
Confidence 5899999886 9999999999887 88888 6532 24456678999999999 45422 1
Q ss_pred --CCCcCCCcEEEEe
Q 017679 291 --GSWLKPGAVVLDV 303 (368)
Q Consensus 291 --~e~ik~gavVIDv 303 (368)
...++++.+||.+
T Consensus 80 ~l~~~~~~~~~iIs~ 94 (266)
T PLN02688 80 ELRPLLSKDKLLVSV 94 (266)
T ss_pred HHHhhcCCCCEEEEe
Confidence 1345677777765
No 197
>PLN03129 NADP-dependent malic enzyme; Provisional
Probab=95.91 E-value=0.024 Score=60.60 Aligned_cols=94 Identities=13% Similarity=0.227 Sum_probs=77.1
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh-----CCC-------EEEEEeCCC--------------
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR-----HHA-------TVSIVHALT-------------- 266 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~-----~gA-------tVti~h~~t-------------- 266 (368)
-++-.|++..++-.+.+++..+++++|+|.+ |..+|.+|.. .|. .+++++++-
T Consensus 302 aV~lAgll~A~r~~g~~l~d~riv~~GAGsA-gigia~ll~~~~~~~~Gls~eeA~~~i~~vD~~GLi~~~r~~~l~~~k 380 (581)
T PLN03129 302 AVALAGLLAALRATGGDLADQRILFAGAGEA-GTGIAELIALAMSRQTGISEEEARKRIWLVDSKGLVTKSRKDSLQPFK 380 (581)
T ss_pred HHHHHHHHHHHHHhCCchhhceEEEECCCHH-HHHHHHHHHHHHHhhcCCChhhhcCcEEEEcCCCeEeCCCCccChHHH
Confidence 4566889999999999999999999999988 9999998876 354 688886541
Q ss_pred ----------CCHhhhccC--CCEEEEecCCCCcccCCCcC------CCcEEEEeecCCC
Q 017679 267 ----------KNPEQITSE--ADIVIAAAGVANLVRGSWLK------PGAVVLDVGTCPV 308 (368)
Q Consensus 267 ----------~~L~~~~~~--ADIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~~ 308 (368)
.+|.+.++. +|++|-+.+.++.+++++++ +.-+|+=++ ||.
T Consensus 381 ~~fa~~~~~~~~L~e~v~~vkptvLIG~S~~~g~Ft~evi~~Ma~~~~rPIIFaLS-NPt 439 (581)
T PLN03129 381 KPFAHDHEPGASLLEAVKAIKPTVLIGLSGVGGTFTKEVLEAMASLNERPIIFALS-NPT 439 (581)
T ss_pred HHHHhhcccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CCC
Confidence 267788888 99999999999999999886 567787776 443
No 198
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.012 Score=54.46 Aligned_cols=39 Identities=26% Similarity=0.320 Sum_probs=34.9
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~ 43 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV 43 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 458899999999988899999999999999999887654
No 199
>PRK10637 cysG siroheme synthase; Provisional
Probab=95.81 E-value=0.015 Score=60.47 Aligned_cols=113 Identities=13% Similarity=0.197 Sum_probs=69.8
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-CCCH-----------------hhhccCCCEEEEecCCCCc-
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL-TKNP-----------------EQITSEADIVIAAAGVANL- 288 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~-t~~L-----------------~~~~~~ADIVIsAvG~p~~- 288 (368)
++++||+|+|||.|.+ +.-=+..|++.||.|||+... ++++ .+.+..+++||.||+.+.+
T Consensus 8 ~~l~~~~vlvvGgG~v-A~rk~~~ll~~ga~v~visp~~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~~n 86 (457)
T PRK10637 8 CQLRDRDCLLVGGGDV-AERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDAVN 86 (457)
T ss_pred EEcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHhCCCEEEEeCCCChHHhCCCEEEEECCCCHHHh
Confidence 5799999999998775 777677888999999998533 1222 2446789999999987643
Q ss_pred --ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhcc---ceEeccCCCcccHHHHHHHHHHHH
Q 017679 289 --VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRL---ASVITPVPGGVGPMTVAMLLSNTL 358 (368)
Q Consensus 289 --I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~---a~~iTPVPGGVGp~T~amLl~N~v 358 (368)
|....-+.| +.+++.-++.. +|+-|....+. .-+|+ -||-.|..+..|-+++-
T Consensus 87 ~~i~~~a~~~~-~lvN~~d~~~~--------------~~f~~pa~~~~g~l~iais--T~G~sP~~a~~lr~~ie 144 (457)
T PRK10637 87 QRVSEAAEARR-IFCNVVDAPKA--------------ASFIMPSIIDRSPLMVAVS--SGGTSPVLARLLREKLE 144 (457)
T ss_pred HHHHHHHHHcC-cEEEECCCccc--------------CeEEEeeEEecCCEEEEEE--CCCCCcHHHHHHHHHHH
Confidence 322221223 44555544321 23333333222 22343 47888888777655443
No 200
>PRK06398 aldose dehydrogenase; Validated
Probab=95.79 E-value=0.02 Score=53.80 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|.++|++|+++.++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5789999999999889999999999999999987764
No 201
>TIGR00465 ilvC ketol-acid reductoisomerase. This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway
Probab=95.77 E-value=0.021 Score=56.77 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=44.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~ 285 (368)
|+||++.|||.|.. |.+++..|.+.|.+|++..+.. .+..+.+++||+||.++.-
T Consensus 1 l~~kkIgiIG~G~m-G~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp 69 (314)
T TIGR00465 1 LKGKTVAIIGYGSQ-GHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPD 69 (314)
T ss_pred CCcCEEEEEeEcHH-HHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCc
Confidence 57999999999986 9999999999998877654331 1345678999999999973
No 202
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=95.76 E-value=0.016 Score=51.19 Aligned_cols=51 Identities=27% Similarity=0.296 Sum_probs=43.5
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhhccCCCEEEEecCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGV 285 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~~~~ADIVIsAvG~ 285 (368)
|+|+|++|.+|+.++..|+++|.+|+.+.|+.. .+.+.++.+|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence 689999888999999999999999999987642 245677899999999884
No 203
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.75 E-value=0.012 Score=53.89 Aligned_cols=53 Identities=26% Similarity=0.295 Sum_probs=35.4
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 278 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI 278 (368)
++|+|||.|- ||.|+|..|++.|.+|+.+..+. .+..+.+++||+
T Consensus 1 M~I~ViGlGy-vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIGLGY-VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE--ST-THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEECCCc-chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 4899999987 59999999999999999996541 234566788888
Q ss_pred EEEecCCC
Q 017679 279 VIAAAGVA 286 (368)
Q Consensus 279 VIsAvG~p 286 (368)
+|.+++.|
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 88888765
No 204
>PRK14030 glutamate dehydrogenase; Provisional
Probab=95.74 E-value=0.1 Score=54.27 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=42.4
Q ss_pred ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679 212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 262 (368)
Q Consensus 212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~ 262 (368)
-+.|.+|++.. +++.+.+++|++|+|=|.|+ ||..+|..|.+.||+|+.+
T Consensus 204 ~~ATg~Gv~~~~~~~~~~~g~~l~g~~vaIQGfGn-VG~~aA~~L~e~GakvVav 257 (445)
T PRK14030 204 PEATGFGALYFVHQMLETKGIDIKGKTVAISGFGN-VAWGAATKATELGAKVVTI 257 (445)
T ss_pred CCccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 35798886654 56778899999999999987 5999999999999997774
No 205
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.70 E-value=0.019 Score=59.75 Aligned_cols=128 Identities=16% Similarity=0.163 Sum_probs=73.0
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP 307 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~ 307 (368)
.+.+|+|+|+|.|+. |++++.+|.+.|++|+++.++.....+.+.+..+.+..-+.+ .+++. ...+|+--|+++
T Consensus 12 ~~~~~~v~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~----~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 12 QELSGRVLVAGAGVS-GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEA----SDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cccCCeEEEEccCHH-HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCc----hhHhcCCCEEEeCCCCCC
Confidence 468899999999998 999999999999999999865332222222223322111111 11222 234555555554
Q ss_pred CCCCCCCCCCCCcEEEcccchhhhhc------cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 308 VDVSVDPSCEYGYRLMGDVCYEEAMR------LASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 308 ~~~~~d~t~~~~~kl~GDVd~~~~~~------~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
..+....-.+.+-++.|+.++..... ....+--|-|=-|.-|+.-|+.++++..
T Consensus 87 ~~p~~~~a~~~gi~v~~~~el~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~ 146 (473)
T PRK00141 87 DSPLLVDAQSQGLEVIGDVELAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEG 146 (473)
T ss_pred CCHHHHHHHHCCCceeeHHHHHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhc
Confidence 32000000012346788887632110 0111224558889999999999998764
No 206
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.68 E-value=0.013 Score=56.73 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=52.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH-------------------------------------hhhccC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP-------------------------------------EQITSE 275 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L-------------------------------------~~~~~~ 275 (368)
++|.|||.|.+ |.++|..|+..|.+|++++++...+ .+.+++
T Consensus 5 ~~V~vIG~G~m-G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (295)
T PLN02545 5 KKVGVVGAGQM-GSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRD 83 (295)
T ss_pred CEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCC
Confidence 68999999876 9999999999999999997643111 145788
Q ss_pred CCEEEEecCC-CC----ccc--CCCcCCCcEEE-Eeec
Q 017679 276 ADIVIAAAGV-AN----LVR--GSWLKPGAVVL-DVGT 305 (368)
Q Consensus 276 ADIVIsAvG~-p~----~I~--~e~ik~gavVI-Dvg~ 305 (368)
||+||.++.. +. ++. .+.++++++++ +.+.
T Consensus 84 aD~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~ 121 (295)
T PLN02545 84 ADFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSS 121 (295)
T ss_pred CCEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 9999999873 22 111 13567787775 5554
No 207
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=95.68 E-value=0.026 Score=53.50 Aligned_cols=52 Identities=21% Similarity=0.301 Sum_probs=43.5
Q ss_pred ccCCHHHHHHHH----HHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679 212 IPCTPKGCIELL----IRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 264 (368)
Q Consensus 212 ~PcTa~gv~~lL----~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~ 264 (368)
.|.|.+|+...+ ++.+.+++|++|+|.|.|+ ||+.++.+|.+.|++|+ ++.+
T Consensus 7 ~~~Tg~Gv~~~~~~~~~~~~~~l~~~~v~I~G~G~-VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 7 EEATGRGVAYATREALKKLGIGLAGARVAIQGFGN-VGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccchHHHHHHHHHHHHhcCCCccCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECC
Confidence 477888876664 4567789999999999987 59999999999999987 7765
No 208
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=95.67 E-value=0.038 Score=54.97 Aligned_cols=93 Identities=14% Similarity=0.165 Sum_probs=62.4
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hhh
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ 271 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~ 271 (368)
+|....++..+...+..-.|++|+|.|.|. ||..+++++...|++|+++...... +.+
T Consensus 165 ~~~~~ta~~al~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~ 243 (360)
T PLN02586 165 LCAGITVYSPMKYYGMTEPGKHLGVAGLGG-LGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKA 243 (360)
T ss_pred hcchHHHHHHHHHhcccCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHh
Confidence 444455555555555445799999999865 5999999999999987765433211 112
Q ss_pred hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679 272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n 306 (368)
.+..+|+||.++|.+..+ .-+.+++|..++.+|..
T Consensus 244 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 244 AIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred hcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 223479999998876533 23567888888888864
No 209
>PRK09414 glutamate dehydrogenase; Provisional
Probab=95.66 E-value=0.13 Score=53.72 Aligned_cols=51 Identities=27% Similarity=0.223 Sum_probs=42.9
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEE
Q 017679 211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV 262 (368)
Q Consensus 211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~ 262 (368)
-.+.|.+|+... +++.+.+++|++|+|.|.|+ ||+.+|.+|.+.|++|+.+
T Consensus 207 r~~aTg~Gv~~~~~~~~~~~~~~l~g~rVaIqGfGn-VG~~~A~~L~~~GakVVav 261 (445)
T PRK09414 207 RTEATGYGLVYFAEEMLKARGDSFEGKRVVVSGSGN-VAIYAIEKAQQLGAKVVTC 261 (445)
T ss_pred CCCcccHHHHHHHHHHHHhcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEE
Confidence 346888886655 45668899999999999988 5999999999999998766
No 210
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.65 E-value=0.034 Score=57.40 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=32.3
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+.||+|+|+|.|.. |+++|.+|.++|++|+++...
T Consensus 12 ~~~~~i~v~G~G~s-G~a~a~~L~~~G~~V~~~D~~ 46 (458)
T PRK01710 12 IKNKKVAVVGIGVS-NIPLIKFLVKLGAKVTAFDKK 46 (458)
T ss_pred hcCCeEEEEcccHH-HHHHHHHHHHCCCEEEEECCC
Confidence 56899999999998 999999999999999999865
No 211
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.027 Score=52.47 Aligned_cols=38 Identities=29% Similarity=0.317 Sum_probs=34.3
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARS 42 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCC
Confidence 45789999999998889999999999999999888764
No 212
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=95.61 E-value=0.022 Score=53.07 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=49.4
Q ss_pred eEEEEc-cCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------CHhhhccCCCEEEEecCCCC
Q 017679 234 NAVVIG-RSNIVGLPTSLLLQRHHATVSIVHALTK-------------------------NPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 234 ~VvVIG-~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------------~L~~~~~~ADIVIsAvG~p~ 287 (368)
++.||| .|. +|..++..|.+.|.+|++..++.. +..+.++++|+||.++....
T Consensus 2 kI~IIGG~G~-mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~ 80 (219)
T TIGR01915 2 KIAVLGGTGD-QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDH 80 (219)
T ss_pred EEEEEcCCCH-HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHH
Confidence 689998 565 599999999999999998876431 23355788999999998543
Q ss_pred c---cc--CCCcCCCcEEEEee
Q 017679 288 L---VR--GSWLKPGAVVLDVG 304 (368)
Q Consensus 288 ~---I~--~e~ik~gavVIDvg 304 (368)
+ +. ...+. +.+|||+.
T Consensus 81 ~~~~l~~l~~~l~-~~vvI~~~ 101 (219)
T TIGR01915 81 VLKTLESLRDELS-GKLVISPV 101 (219)
T ss_pred HHHHHHHHHHhcc-CCEEEEec
Confidence 3 11 12233 57899983
No 213
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.017 Score=54.06 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++|++++|.|+++-+|+.++..|+++|++|+++.+..
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~ 39 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA 39 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988899999999999999999987653
No 214
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.59 E-value=0.029 Score=54.32 Aligned_cols=53 Identities=19% Similarity=0.174 Sum_probs=44.0
Q ss_pred cccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeC
Q 017679 211 FIPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHA 264 (368)
Q Consensus 211 ~~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~ 264 (368)
--+.|.+|++.. +++.+.+++|++|+|-|.|++ |+.++.+|.+.|++|+ |+.+
T Consensus 13 R~~aTg~Gv~~~~~~~~~~~~~~l~g~~vaIqGfGnV-G~~~a~~L~e~GakvvaVsD~ 70 (254)
T cd05313 13 RPEATGYGLVYFVEEMLKDRNETLKGKRVAISGSGNV-AQYAAEKLLELGAKVVTLSDS 70 (254)
T ss_pred CCchhHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEECC
Confidence 347788886655 456788999999999999885 9999999999999877 6653
No 215
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.58 E-value=0.027 Score=51.54 Aligned_cols=57 Identities=26% Similarity=0.353 Sum_probs=44.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC------------CH----h---hhccCCCEEEEecCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------NP----E---QITSEADIVIAAAGV 285 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------~L----~---~~~~~ADIVIsAvG~ 285 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.. |+ . +.....|+||..+|.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 478999999999998999999999999999998876531 11 1 123457899987774
No 216
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.024 Score=53.61 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=44.0
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-C---------------------CHhhhccCCCEEEEecCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-K---------------------NPEQITSEADIVIAAAGV 285 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-~---------------------~L~~~~~~ADIVIsAvG~ 285 (368)
.++||+++|.|+|+-+|+.++..|+++|++|+++.++. . ++.+...+.|++|+.+|.
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 46899999999988889999999999999998876543 1 122344567888877764
No 217
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=95.54 E-value=0.036 Score=57.75 Aligned_cols=126 Identities=21% Similarity=0.219 Sum_probs=73.3
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCH--hhhccCCCEEEEecCCCCcccCCCcCC-CcEEEEeecC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNP--EQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC 306 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L--~~~~~~ADIVIsAvG~p~~I~~e~ik~-gavVIDvg~n 306 (368)
+.||+|+|+|-|.. |++++..|.++|+.|+++..+.... ...-...+-|=...|. +.. ++... ..+|.-=|++
T Consensus 5 ~~~~kv~V~GLG~s-G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~-~~~--~~~~~~d~vV~SPGi~ 80 (448)
T COG0771 5 FQGKKVLVLGLGKS-GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGS-HDD--EDLAEFDLVVKSPGIP 80 (448)
T ss_pred ccCCEEEEEecccc-cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCc-cch--hccccCCEEEECCCCC
Confidence 45999999999998 9999999999999999998654331 0110011111111221 111 23322 4555555555
Q ss_pred CCCCCCCCCCCCCcEEEcccchhhh---hccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679 307 PVDVSVDPSCEYGYRLMGDVCYEEA---MRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362 (368)
Q Consensus 307 ~~~~~~d~t~~~~~kl~GDVd~~~~---~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 362 (368)
+....+..-...+-++.||++.--- ....-+|| |==|.-|++.|+.++++++-
T Consensus 81 ~~~p~v~~A~~~gi~i~~dieL~~r~~~~~p~vaIT---GTNGKTTTTsli~~~l~~~G 136 (448)
T COG0771 81 PTHPLVEAAKAAGIEIIGDIELFYRLSGEAPIVAIT---GTNGKTTTTSLIAHLLKAAG 136 (448)
T ss_pred CCCHHHHHHHHcCCcEEeHHHHHHHhcCCCCEEEEE---CCCchHHHHHHHHHHHHhcC
Confidence 5321000001124578999984221 11233344 55679999999999998864
No 218
>PLN02712 arogenate dehydrogenase
Probab=95.52 E-value=0.022 Score=62.02 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=56.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------CCHhhhc-cCCCEEEEecCCCC---ccc--
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------KNPEQIT-SEADIVIAAAGVAN---LVR-- 290 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------~~L~~~~-~~ADIVIsAvG~p~---~I~-- 290 (368)
-+.+++.|||.|.+ |..++..|.+.|.+|+++.+.. .++.+.+ .+||+||.++.... ++.
T Consensus 50 ~~~~kIgIIG~G~m-G~slA~~L~~~G~~V~~~dr~~~~~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l 128 (667)
T PLN02712 50 TTQLKIAIIGFGNY-GQFLAKTLISQGHTVLAHSRSDHSLAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSL 128 (667)
T ss_pred CCCCEEEEEccCHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhh
Confidence 34578999999876 9999999999999999887652 1333434 46999999998422 222
Q ss_pred -CCCcCCCcEEEEeecC
Q 017679 291 -GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 291 -~e~ik~gavVIDvg~n 306 (368)
...+++|++|+|++.-
T Consensus 129 ~~~~l~~g~iVvDv~Sv 145 (667)
T PLN02712 129 PLQRLKRNTLFVDVLSV 145 (667)
T ss_pred hhhcCCCCeEEEECCCC
Confidence 2457889999999853
No 219
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.49 E-value=0.052 Score=53.98 Aligned_cols=135 Identities=22% Similarity=0.310 Sum_probs=87.1
Q ss_pred HHHHHHHHH----------hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------
Q 017679 217 KGCIELLIR----------SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------- 266 (368)
Q Consensus 217 ~gv~~lL~~----------~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------- 266 (368)
.+++..+.. .+....+.+++++|.|-+ |..++..-...|+-||-..-+.
T Consensus 139 ~aVi~Aa~a~~rffpm~~TAagtv~pA~vlv~G~Gva-gl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee 217 (356)
T COG3288 139 IAVIGAALAYGRFFPMQITAAGTVSPAKVLVIGAGVA-GLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEE 217 (356)
T ss_pred HHHHHHHHHhhhcccchhhhcccccchhhhhhhHHHH-HHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccc
Confidence 567777666 346778899999999865 8777766666777666543110
Q ss_pred ------------------CCHhhhccCCCEEEEec---CC--CCcccCCCc---CCCcEEEEeecCCCCCCCCCCCC--C
Q 017679 267 ------------------KNPEQITSEADIVIAAA---GV--ANLVRGSWL---KPGAVVLDVGTCPVDVSVDPSCE--Y 318 (368)
Q Consensus 267 ------------------~~L~~~~~~ADIVIsAv---G~--p~~I~~e~i---k~gavVIDvg~n~~~~~~d~t~~--~ 318 (368)
.-+.++.++.||||+.. |+ |.+|+.+|+ |||.+|+|+....-- .|+ .
T Consensus 218 ~~gGYAk~ms~~~~~~q~~~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GG-----Nce~t~ 292 (356)
T COG3288 218 SAGGYAKEMSEEFIAKQAELVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGG-----NCELTE 292 (356)
T ss_pred cCCCccccCCHHHHHHHHHHHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCC-----Cccccc
Confidence 01457899999999877 43 557999886 899999999865421 111 0
Q ss_pred CcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHHH
Q 017679 319 GYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSAK 362 (368)
Q Consensus 319 ~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~~ 362 (368)
-++++ ....+ ...| .|-+||-+-.-...+.-+|++...+
T Consensus 293 pg~~v---~~~gV-~iig-~~nlp~r~a~~aS~LYa~Nl~~~l~ 331 (356)
T COG3288 293 PGKVV---TKNGV-KIIG-YTNLPGRLAAQASQLYATNLVNLLK 331 (356)
T ss_pred CCeEE---EeCCe-EEEe-ecCcchhhhhhHHHHHHHHHHHHHH
Confidence 11222 11112 3445 3577887766666677777766554
No 220
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.45 E-value=0.027 Score=59.32 Aligned_cols=73 Identities=19% Similarity=0.295 Sum_probs=56.2
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhcc---CCCEEEEecCCCCcc
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITS---EADIVIAAAGVANLV 289 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~---~ADIVIsAvG~p~~I 289 (368)
+|-+||-|.. |.++|..|+++|.+|++++|+.. ++++.++ ++|+||+.+..+..+
T Consensus 8 ~IG~IGLG~M-G~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV 86 (493)
T PLN02350 8 RIGLAGLAVM-GQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPV 86 (493)
T ss_pred CEEEEeeHHH-HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHH
Confidence 6899999986 99999999999999999998631 2223444 499999998765532
Q ss_pred c------CCCcCCCcEEEEeecCC
Q 017679 290 R------GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 290 ~------~e~ik~gavVIDvg~n~ 307 (368)
. ...+++|.+|||.|...
T Consensus 87 ~~Vi~gl~~~l~~G~iiID~sT~~ 110 (493)
T PLN02350 87 DQTIKALSEYMEPGDCIIDGGNEW 110 (493)
T ss_pred HHHHHHHHhhcCCCCEEEECCCCC
Confidence 1 23468899999999764
No 221
>PLN02858 fructose-bisphosphate aldolase
Probab=95.44 E-value=0.021 Score=66.88 Aligned_cols=76 Identities=18% Similarity=0.189 Sum_probs=61.1
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc-----cC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV-----RG 291 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I-----~~ 291 (368)
++++|-+||-|.+ |.++|..|++.|.+|++.+++. .+..+..++||+||+.+..+.-+ ..
T Consensus 3 ~~~~IGfIGLG~M-G~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~ 81 (1378)
T PLN02858 3 SAGVVGFVGLDSL-SFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGD 81 (1378)
T ss_pred CCCeEEEEchhHH-HHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhch
Confidence 4678999999987 9999999999999999998863 35668888999999999865422 11
Q ss_pred ----CCcCCCcEEEEeecCC
Q 017679 292 ----SWLKPGAVVLDVGTCP 307 (368)
Q Consensus 292 ----e~ik~gavVIDvg~n~ 307 (368)
+.+++|.++||+++..
T Consensus 82 ~g~~~~l~~g~iivd~STi~ 101 (1378)
T PLN02858 82 EGAAKGLQKGAVILIRSTIL 101 (1378)
T ss_pred hhHHhcCCCcCEEEECCCCC
Confidence 2357899999999754
No 222
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.42 E-value=0.033 Score=53.95 Aligned_cols=73 Identities=19% Similarity=0.202 Sum_probs=53.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---------------------------------------CCCHhhhc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---------------------------------------TKNPEQIT 273 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---------------------------------------t~~L~~~~ 273 (368)
++|.|||.|.. |..+|..|++.|.+|+++.+. +.++++.+
T Consensus 4 ~kIaViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~ 82 (287)
T PRK08293 4 KNVTVAGAGVL-GSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAV 82 (287)
T ss_pred cEEEEECCCHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHh
Confidence 58999998765 999999999999999999653 23455678
Q ss_pred cCCCEEEEecCCCC-----ccc--CCCcCCCcEEEEeecC
Q 017679 274 SEADIVIAAAGVAN-----LVR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 274 ~~ADIVIsAvG~p~-----~I~--~e~ik~gavVIDvg~n 306 (368)
++||+||.|+...- ++. .+.+++++++.+....
T Consensus 83 ~~aDlVieavpe~~~~k~~~~~~l~~~~~~~~ii~sntSt 122 (287)
T PRK08293 83 KDADLVIEAVPEDPEIKGDFYEELAKVAPEKTIFATNSST 122 (287)
T ss_pred cCCCEEEEeccCCHHHHHHHHHHHHhhCCCCCEEEECccc
Confidence 99999999997431 111 1345778877665443
No 223
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.37 E-value=0.04 Score=54.60 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=43.4
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCCC-----------------------CHhhhccCCCEEEEecCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALTK-----------------------NPEQITSEADIVIAAAGV 285 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t~-----------------------~L~~~~~~ADIVIsAvG~ 285 (368)
.|+||.|||+|. ||..++..|+..|. ++.+++.+.. +-.+.+++|||||.+.|.
T Consensus 5 ~~~ki~iiGaG~-vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~ 83 (315)
T PRK00066 5 QHNKVVLVGDGA-VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA 83 (315)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence 578999999976 59999999998885 6888875321 123568999999999997
Q ss_pred C
Q 017679 286 A 286 (368)
Q Consensus 286 p 286 (368)
|
T Consensus 84 ~ 84 (315)
T PRK00066 84 P 84 (315)
T ss_pred C
Confidence 5
No 224
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.34 E-value=0.047 Score=54.12 Aligned_cols=56 Identities=25% Similarity=0.454 Sum_probs=44.0
Q ss_pred CccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC--------------------------CCHhhhccCCCEEEEe
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t--------------------------~~L~~~~~~ADIVIsA 282 (368)
.+.+||+|||+|. ||..++.+|+..| +++.++..+. .+++ .+++||+||.+
T Consensus 3 ~~~~KI~IIGaG~-vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit 80 (319)
T PTZ00117 3 VKRKKISMIGAGQ-IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT 80 (319)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence 4678999999866 5999999999888 6888876431 2444 77999999999
Q ss_pred cCCCC
Q 017679 283 AGVAN 287 (368)
Q Consensus 283 vG~p~ 287 (368)
+|.|.
T Consensus 81 ag~~~ 85 (319)
T PTZ00117 81 AGVQR 85 (319)
T ss_pred CCCCC
Confidence 97643
No 225
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=95.32 E-value=0.021 Score=58.29 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=55.6
Q ss_pred ccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC---------------------CHh-hhccCCCEEEEecCCC-
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK---------------------NPE-QITSEADIVIAAAGVA- 286 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~---------------------~L~-~~~~~ADIVIsAvG~p- 286 (368)
..++|.|+|++|.+|+-+..+|.++ +.+|+.+.+... ++. +.++++|+||.|+|.-
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5579999999999999999999998 678887765310 011 1247799999999752
Q ss_pred --CcccCCCcCCCcEEEEeecCCC
Q 017679 287 --NLVRGSWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 287 --~~I~~e~ik~gavVIDvg~n~~ 308 (368)
++++. + +.|..|||++....
T Consensus 117 s~~i~~~-~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 117 TQEIIKA-L-PKDLKIVDLSADFR 138 (381)
T ss_pred HHHHHHH-H-hCCCEEEEcCchhc
Confidence 23333 3 67899999997653
No 226
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.023 Score=51.59 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=34.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~ 41 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGA 41 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCCh
Confidence 46799999999999999999999999999999998754
No 227
>PRK07680 late competence protein ComER; Validated
Probab=95.29 E-value=0.03 Score=53.74 Aligned_cols=70 Identities=16% Similarity=0.239 Sum_probs=51.6
Q ss_pred eEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc----c
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL----V 289 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~----I 289 (368)
++.|||.|.+ |..++..|.+.| .+|++++++. .+..+.+.++|+||.++. |.. +
T Consensus 2 ~I~iIG~G~m-G~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~-p~~~~~vl 79 (273)
T PRK07680 2 NIGFIGTGNM-GTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVK-PLDIYPLL 79 (273)
T ss_pred EEEEECccHH-HHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecC-HHHHHHHH
Confidence 5899998876 999999999888 3789888752 234456789999999984 332 2
Q ss_pred c--CCCcCCCcEEEEeec
Q 017679 290 R--GSWLKPGAVVLDVGT 305 (368)
Q Consensus 290 ~--~e~ik~gavVIDvg~ 305 (368)
. ...++++.+||++.-
T Consensus 80 ~~l~~~l~~~~~iis~~a 97 (273)
T PRK07680 80 QKLAPHLTDEHCLVSITS 97 (273)
T ss_pred HHHHhhcCCCCEEEEECC
Confidence 1 135667889999873
No 228
>PRK06199 ornithine cyclodeaminase; Validated
Probab=95.28 E-value=0.037 Score=56.35 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=56.4
Q ss_pred ccceEEEEccCccchHHHHHHHhh-C-C-CEEEEEeCCC-----------------------CCHhhhccCCCEEEEecC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR-H-H-ATVSIVHALT-----------------------KNPEQITSEADIVIAAAG 284 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~-~-g-AtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG 284 (368)
.-+++.|||.|.- ++.-+..+.. + + .+|.+.+++. .+.++.+++|||||++|+
T Consensus 154 da~~l~iiG~G~Q-A~~~l~a~~~v~~~i~~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~ 232 (379)
T PRK06199 154 DSKVVGLLGPGVM-GKTILAAFMAVCPGIDTIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNS 232 (379)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccC
Confidence 4578899998876 8877777665 3 2 4788887652 245677899999999997
Q ss_pred CC-------CcccCCCcCCCcEEEEeecCC
Q 017679 285 VA-------NLVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 285 ~p-------~~I~~e~ik~gavVIDvg~n~ 307 (368)
.. -++..+|++||+.|+=+|...
T Consensus 233 s~~~~~s~~Pv~~~~~lkpG~hv~~ig~~e 262 (379)
T PRK06199 233 GETGDPSTYPYVKREWVKPGAFLLMPAACR 262 (379)
T ss_pred CCCCCCCcCcEecHHHcCCCcEEecCCccc
Confidence 42 257899999999888777643
No 229
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.28 E-value=0.044 Score=51.66 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679 217 KGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 266 (368)
Q Consensus 217 ~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t 266 (368)
.++.+.+++.+.+++|++|+|.|.|+ ||+.++.+|.++|+ .|.++.++.
T Consensus 8 ~~~~~~~~~~~~~l~g~~vaIqGfGn-VG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 8 VAMKAAMKHLGDSLEGLTVAVQGLGN-VGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred HHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEEcCCC
Confidence 34455567778899999999999988 59999999999987 566676543
No 230
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed
Probab=95.27 E-value=1 Score=45.34 Aligned_cols=191 Identities=14% Similarity=0.116 Sum_probs=111.3
Q ss_pred eeecHHHHHHHHHHHHHHHHHHHHcCC---CCC-EEEEEEeCCCcccHHHHHHHHHHHHHcCCeEEEEEcCCC-------
Q 017679 76 VIDGKSIAEEIRSGIDKEVRRMKKSIG---KVP-GLAVILVGERRDSQTYVRNKIKACEEVGIKSIVTEFADG------- 144 (368)
Q Consensus 76 ildGk~ia~~i~~~i~~~v~~l~~~~g---~~P-~LaiI~vG~d~aS~~Yv~~k~k~a~~~GI~~~~~~l~~~------- 144 (368)
+|+-+.+.++=.+.|-+...+++.... .+- .++.+.. .|.-.+- -.=..++.++|-++.++.-...
T Consensus 6 ll~i~dl~~~ei~~ll~~A~~~k~~~~~~~L~gk~l~~lF~--epSTRTR-~SFe~A~~~LGg~~i~l~~~~ss~~~e~~ 82 (335)
T PRK04523 6 FLNTQDWSRAELDALLTQAAAFKRNKLGSALKGKSIALVFF--NPSLRTR-TSFELGAFQLGGHAVVLQPGKDAWPIEFE 82 (335)
T ss_pred cCchhhCCHHHHHHHHHHHHHHHhcccCccCCCCEEEEEEc--CCCchhH-HHHHHHHHHcCCeEEEeCcccccchhhcc
Confidence 455555555444455555555553211 111 3344332 3333333 3557789999999877743321
Q ss_pred -------CCHHHHHHHHHHhhhccCccEEEEeCCCCCCCC-----HHHHHhcCCcccccCccCcceeeeccccCCcCccc
Q 017679 145 -------CTEDEVLNALSNYNQDSSINGILVQLPLPQHLD-----EGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFI 212 (368)
Q Consensus 145 -------~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id-----~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~ 212 (368)
...|.+.+.++-|+.- +|+|.+-.|-.. .+ ....++.+...- .+-.+|. + .. +.
T Consensus 83 ~g~~~~~~kgEsl~Dtarvls~~--~D~iv~R~~~~g-~~~~~~~~~~~~~~~a~~s---~vPVINa-----~--~~-~H 148 (335)
T PRK04523 83 LGAVMDGETEEHIREVARVLSRY--VDLIGVRAFPKF-VDWSKDRQDQVLNSFAKYS---TVPVINM-----E--TI-TH 148 (335)
T ss_pred cccccCCCCCcCHHHHHHHHHHh--CcEEEEeCCccc-cccccchhHHHHHHHHHhC---CCCEEEC-----C--CC-CC
Confidence 0125567777777764 789998865321 11 112223332221 2344564 2 23 67
Q ss_pred cCCHHHHHHHHHHhCCCC-ccceEEEEccC------ccchHHHHHHHhhCCCEEEEEeC-C-------------------
Q 017679 213 PCTPKGCIELLIRSGVEI-MGKNAVVIGRS------NIVGLPTSLLLQRHHATVSIVHA-L------------------- 265 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l-~GK~VvVIG~g------~~VGrpla~lL~~~gAtVti~h~-~------------------- 265 (368)
||=+.+=+--++++...+ +|++++|++.| ..|.+.++.+|...|++|++++- .
T Consensus 149 PtQaLaDl~Ti~e~~g~~~~g~ki~i~~~gd~~~~~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~ 228 (335)
T PRK04523 149 PCQELAHALALQEHFGTTLRGKKYVLTWTYHPKPLNTAVANSALLIATRLGMDVTLLCPTPDYILDERYMDWAEQNAAES 228 (335)
T ss_pred hHHHHHHHHHHHHHhCCccCCCEEEEEEeccCcccccHHHHHHHHHHHHcCCEEEEECCchhhCCCHHHHHHHHHHHHHc
Confidence 998888444444444468 89999887543 24688888999999999999976 2
Q ss_pred ------CCCHhhhccCCCEEEEec
Q 017679 266 ------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 266 ------t~~L~~~~~~ADIVIsAv 283 (368)
+.++.+.+++||+|.+-.
T Consensus 229 g~~~~~~~d~~ea~~~aDvvy~~~ 252 (335)
T PRK04523 229 GGSLTVSHDIDSAYAGADVVYAKS 252 (335)
T ss_pred CCeEEEEcCHHHHhCCCCEEEece
Confidence 245668899999998643
No 231
>PLN02477 glutamate dehydrogenase
Probab=95.26 E-value=0.038 Score=56.92 Aligned_cols=53 Identities=23% Similarity=0.318 Sum_probs=44.0
Q ss_pred ccCCHHHHHHH----HHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeCC
Q 017679 212 IPCTPKGCIEL----LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 265 (368)
Q Consensus 212 ~PcTa~gv~~l----L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~~ 265 (368)
.+.|.+|+... +++++.+++|++|+|.|.|+ ||+.++.+|.++|++|+ |+.++
T Consensus 182 ~~aTg~Gv~~~~~~~~~~~g~~l~g~~VaIqGfGn-VG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 182 EAATGRGVVFATEALLAEHGKSIAGQTFVIQGFGN-VGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred CccchHHHHHHHHHHHHHcCCCccCCEEEEECCCH-HHHHHHHHHHHcCCEEEEEECCC
Confidence 36788886554 55678899999999999987 59999999999999877 76654
No 232
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.26 E-value=0.017 Score=53.66 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=34.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|.+..++.
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~ 44 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP 44 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 57899999999988899999999999999999887753
No 233
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.019 Score=53.53 Aligned_cols=39 Identities=15% Similarity=0.193 Sum_probs=35.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 267 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~ 267 (368)
+++||.++|.|+|.-+|+.++..|+++|++|.+++|+..
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~ 40 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQS 40 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 478999999999998999999999999999999887653
No 234
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.23 E-value=0.02 Score=57.08 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=52.2
Q ss_pred cceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---------------CCHh-hhccCCCEEEEecCCCC--ccc
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPE-QITSEADIVIAAAGVAN--LVR 290 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---------------~~L~-~~~~~ADIVIsAvG~p~--~I~ 290 (368)
+++|.|+|++|.+|+-+..+|.+++. ++....+.. .++. ..+..+|+||.|+|.-. -+-
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~ 80 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA 80 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH
Confidence 46899999999999999999999764 445554331 0111 22468999999997421 122
Q ss_pred CCCcCCCcEEEEeecCC
Q 017679 291 GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 291 ~e~ik~gavVIDvg~n~ 307 (368)
+..++.|++|||.+..+
T Consensus 81 ~~~~~~G~~VIDlS~~~ 97 (334)
T PRK14874 81 PKAAAAGAVVIDNSSAF 97 (334)
T ss_pred HHHHhCCCEEEECCchh
Confidence 23456789999998654
No 235
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.23 E-value=0.094 Score=56.67 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.9
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.||+|+|||+|-+ |...|..|.++|++|+++.+.
T Consensus 309 ~~kkVaIIG~Gpa-Gl~aA~~L~~~G~~Vtv~e~~ 342 (639)
T PRK12809 309 RSEKVAVIGAGPA-GLGCADILARAGVQVDVFDRH 342 (639)
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHcCCcEEEEeCC
Confidence 5999999999877 999999999999999999654
No 236
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.23 E-value=0.037 Score=57.95 Aligned_cols=73 Identities=16% Similarity=0.245 Sum_probs=54.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhcc---CCCEEEEecCCCCc-
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQITS---EADIVIAAAGVANL- 288 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~~---~ADIVIsAvG~p~~- 288 (368)
.++.|||.|.. |.++|..|+++|.+|++.+++.. ++++.+. ++|+||..+..+..
T Consensus 2 ~~IgvIGLG~M-G~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v 80 (470)
T PTZ00142 2 SDIGLIGLAVM-GQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAV 80 (470)
T ss_pred CEEEEEeEhHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHH
Confidence 36899999986 99999999999999999987531 3344444 48988877654432
Q ss_pred ---cc--CCCcCCCcEEEEeecC
Q 017679 289 ---VR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 289 ---I~--~e~ik~gavVIDvg~n 306 (368)
+. ...+++|.+|||.|..
T Consensus 81 ~~vi~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 81 DETIDNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HHHHHHHHhhCCCCCEEEECCCC
Confidence 21 2357889999999965
No 237
>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]
Probab=95.22 E-value=0.062 Score=53.89 Aligned_cols=76 Identities=20% Similarity=0.341 Sum_probs=58.8
Q ss_pred ccceEEEEccCccchHHHHHHHhhC-C-CEEEEEeCCC---------------------CCHhhhccCCCEEEEecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH-H-ATVSIVHALT---------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~-g-AtVti~h~~t---------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
.-+.+.|||+|.- ++--++.+... + -+|.|..++. .+.++.++.|||||++|....
T Consensus 129 da~~laiIGaG~q-A~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 129 DASTLAIIGAGAQ-ARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCcEEEEECCcHH-HHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 3567899998865 87776666543 3 3788877652 367788999999999998655
Q ss_pred -cccCCCcCCCcEEEEeecCC
Q 017679 288 -LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 -~I~~e~ik~gavVIDvg~n~ 307 (368)
+++.+|++||+.|.=+|.+.
T Consensus 208 Pil~~~~l~~G~hI~aiGad~ 228 (330)
T COG2423 208 PVLKAEWLKPGTHINAIGADA 228 (330)
T ss_pred CeecHhhcCCCcEEEecCCCC
Confidence 58999999999999999653
No 238
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.033 Score=53.86 Aligned_cols=40 Identities=28% Similarity=0.335 Sum_probs=35.3
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
...++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~ 74 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE 74 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4567899999999988889999999999999999987753
No 239
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.18 E-value=0.027 Score=54.58 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=51.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------------------CHhhhcc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------------NPEQITS 274 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------------------~L~~~~~ 274 (368)
++|.|||.|.. |.++|..|++.|.+|++.+++.. ++ +.++
T Consensus 5 ~kI~vIGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 82 (292)
T PRK07530 5 KKVGVIGAGQM-GNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDL-EDLA 82 (292)
T ss_pred CEEEEECCcHH-HHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCH-HHhc
Confidence 68999999876 99999999999999999976421 22 3467
Q ss_pred CCCEEEEecCCCCc-----cc--CCCcCCCcEEE-Eee
Q 017679 275 EADIVIAAAGVANL-----VR--GSWLKPGAVVL-DVG 304 (368)
Q Consensus 275 ~ADIVIsAvG~p~~-----I~--~e~ik~gavVI-Dvg 304 (368)
+||+||.+++.... +. ...++++++++ +.+
T Consensus 83 ~aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts 120 (292)
T PRK07530 83 DCDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTS 120 (292)
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCC
Confidence 89999999974321 21 13467788776 444
No 240
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.16 E-value=0.019 Score=53.14 Aligned_cols=36 Identities=25% Similarity=0.491 Sum_probs=31.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
.|++++|+|||.|++ |..++..|...|. ++++++..
T Consensus 18 kl~~~~VlviG~Ggl-Gs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIGAGGL-GSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEECCCHH-HHHHHHHHHHcCCCeEEEecCC
Confidence 478999999999986 9999999999996 89988643
No 241
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.13 E-value=0.021 Score=53.04 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=35.6
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
..++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~ 45 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA 45 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH
Confidence 458999999999999999999999999999999998764
No 242
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.13 E-value=0.045 Score=56.81 Aligned_cols=123 Identities=17% Similarity=0.138 Sum_probs=68.7
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCc-CCCcEEEEeecCCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGTCPVD 309 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~n~~~ 309 (368)
.||+|+|+|.|.. |++++.+|. +|++|++...+.....+.-..-+..+ .|. + +.+.+ ..+.+|+--|+++..
T Consensus 5 ~~~~v~v~G~G~s-G~a~~~~L~-~g~~v~v~D~~~~~~~~~~~~~~~~~--~~~-~--~~~~~~~~d~vV~SPgI~~~~ 77 (454)
T PRK01368 5 TKQKIGVFGLGKT-GISVYEELQ-NKYDVIVYDDLKANRDIFEELYSKNA--IAA-L--SDSRWQNLDKIVLSPGIPLTH 77 (454)
T ss_pred CCCEEEEEeecHH-HHHHHHHHh-CCCEEEEECCCCCchHHHHhhhcCce--ecc-C--ChhHhhCCCEEEECCCCCCCC
Confidence 5899999999998 999999999 49999999855432221100001111 111 0 00111 123455555555421
Q ss_pred CCCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 310 VSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 310 ~~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.....-.+.+-++++++++-. ..+.. .+--|-|--|.-|+.-|+.++++.+
T Consensus 78 p~~~~a~~~gi~v~~e~el~~~~~~~~-~~IaVTGTnGKTTTt~ll~~iL~~~ 129 (454)
T PRK01368 78 EIVKIAKNFNIPITSDIDLLFEKSKNL-KFIAITGTNGKSTTTALISHILNSN 129 (454)
T ss_pred HHHHHHHHCCCceecHHHHHHHHhcCC-CEEEEECCCcHHHHHHHHHHHHHhc
Confidence 000000011346888888732 21111 1224568889999999999998764
No 243
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.09 E-value=0.052 Score=56.42 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=74.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHhh--hccCCCEEEEecCCCCcccCCCc-CCCcEEEEeec
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQ--ITSEADIVIAAAGVANLVRGSWL-KPGAVVLDVGT 305 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~--~~~~ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~ 305 (368)
++||+|+|+|.|.. |++++.+|.++|+.|++...+.. +..+ .+++ +++....+.+ .+.+ ..+.+|+--|+
T Consensus 6 ~~~~~v~v~G~G~s-G~~~~~~l~~~g~~v~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~----~~~~~~~d~vV~SpgI 79 (468)
T PRK04690 6 LEGRRVALWGWGRE-GRAAYRALRAHLPAQALTLFCNAVEAREVGALAD-AALLVETEAS----AQRLAAFDVVVKSPGI 79 (468)
T ss_pred cCCCEEEEEccchh-hHHHHHHHHHcCCEEEEEcCCCcccchHHHHHhh-cCEEEeCCCC----hHHccCCCEEEECCCC
Confidence 46999999999988 99999999999999999875432 2221 2333 3322222211 1122 12456666666
Q ss_pred CCCCCCCCCCCCCCcEEEcccch--hhhhc-c--ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 306 CPVDVSVDPSCEYGYRLMGDVCY--EEAMR-L--ASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 306 n~~~~~~d~t~~~~~kl~GDVd~--~~~~~-~--a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
++.......-.+.+-++++++++ ....+ . ...+--|-|-.|.-|+.-|+.++++.+
T Consensus 80 ~~~~p~~~~a~~~~i~i~~~~el~~~~~~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~ 140 (468)
T PRK04690 80 SPYRPEALAAAARGTPFIGGTALWFAEHAARDGVVPGTVCVTGTKGKSTTTALLAHLLRAA 140 (468)
T ss_pred CCCCHHHHHHHHcCCcEEEHHHHHHHHHhhccCCCCCEEEEeCCCCHHHHHHHHHHHHHhc
Confidence 65320000000123368888886 22111 0 011225668899999999999998764
No 244
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.08 E-value=0.042 Score=56.48 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=35.0
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
..++||+++|.|+++-+|+.++..|.++|++|+++.++.
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~ 212 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS 212 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 467899999999999999999999999999999887654
No 245
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.05 E-value=0.025 Score=51.93 Aligned_cols=38 Identities=24% Similarity=0.245 Sum_probs=34.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++++|+++|+|+++-+|+.++..|+++|++|++..|+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~ 39 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE 39 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36899999999999999999999999999999998764
No 246
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.03 E-value=0.042 Score=53.53 Aligned_cols=53 Identities=25% Similarity=0.359 Sum_probs=43.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------------CCHhhhccCCCEE
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQITSEADIV 279 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------------~~L~~~~~~ADIV 279 (368)
++|.|||.|.+ |.+++..|++.|.+|+++++.. .++.+.+++||+|
T Consensus 5 ~~I~vIGaG~m-G~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlV 83 (311)
T PRK06130 5 QNLAIIGAGTM-GSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLV 83 (311)
T ss_pred cEEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEE
Confidence 68999999875 9999999999999999997532 2344567899999
Q ss_pred EEecCCC
Q 017679 280 IAAAGVA 286 (368)
Q Consensus 280 IsAvG~p 286 (368)
|.++...
T Consensus 84 i~av~~~ 90 (311)
T PRK06130 84 IEAVPEK 90 (311)
T ss_pred EEeccCc
Confidence 9998743
No 247
>PRK06444 prephenate dehydrogenase; Provisional
Probab=95.02 E-value=0.024 Score=52.73 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=43.8
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcCC-CcEEEEeecC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLKP-GAVVLDVGTC 306 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik~-gavVIDvg~n 306 (368)
+++|||..|-+|+-++..|.+.|..|+ +++||+||.|++.... .+++++ ..+|+|+|.-
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~~~g~~v~------------~~~~DlVilavPv~~~--~~~i~~~~~~v~Dv~Sv 61 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILDDNGLGVY------------IKKADHAFLSVPIDAA--LNYIESYDNNFVEISSV 61 (197)
T ss_pred EEEEEecCCcHHHHHHHHHHhCCCEEE------------ECCCCEEEEeCCHHHH--HHHHHHhCCeEEecccc
Confidence 689999856679999999999999886 4799999999974322 112211 2378899964
No 248
>PLN02858 fructose-bisphosphate aldolase
Probab=95.02 E-value=0.034 Score=65.13 Aligned_cols=73 Identities=18% Similarity=0.254 Sum_probs=59.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCc----c-cC--
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANL----V-RG-- 291 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~----I-~~-- 291 (368)
++|.+||-|.+ |.+++..|++.|.+|++++++. .+..+.++++|+||++++.|.. + ..
T Consensus 325 ~~IGfIGlG~M-G~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~g 403 (1378)
T PLN02858 325 KRIGFIGLGAM-GFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDLG 403 (1378)
T ss_pred CeEEEECchHH-HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchhh
Confidence 88999999986 9999999999999999998753 2456778999999999986652 2 11
Q ss_pred --CCcCCCcEEEEeecC
Q 017679 292 --SWLKPGAVVLDVGTC 306 (368)
Q Consensus 292 --e~ik~gavVIDvg~n 306 (368)
+.+++|.++||+++.
T Consensus 404 ~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 404 AVSALPAGASIVLSSTV 420 (1378)
T ss_pred HHhcCCCCCEEEECCCC
Confidence 235789999999874
No 249
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.00 E-value=0.036 Score=52.31 Aligned_cols=52 Identities=23% Similarity=0.342 Sum_probs=42.7
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------CHhhh-ccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------NPEQI-TSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------~L~~~-~~~ADIVIsAvG~ 285 (368)
++++|||.|.. |..+|..|.++|.+|++..++.. -|++. +.+||++|.+||.
T Consensus 1 m~iiIiG~G~v-G~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGAGRV-GRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECCcHH-HHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 57999999985 99999999999999999976521 14444 7889999999986
No 250
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=95.00 E-value=0.096 Score=51.89 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=94.4
Q ss_pred HHHHHHHHcCCeEEEEEcC-----CCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcce
Q 017679 124 NKIKACEEVGIKSIVTEFA-----DGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLN 198 (368)
Q Consensus 124 ~k~k~a~~~GI~~~~~~l~-----~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N 198 (368)
.=.-++..+|-+..+..=. ..-+-+|-...+..+ +|||++--. +|.+.+++-++ -. +-.+|
T Consensus 61 SFeva~~qlGg~~~~l~~~~~Qlgr~Esi~DTArVLsr~-----~D~I~~R~~--~~~~ve~lA~~----s~---VPViN 126 (310)
T COG0078 61 SFEVAATQLGGHAIYLGPGDSQLGRGESIKDTARVLSRM-----VDAIMIRGF--SHETLEELAKY----SG---VPVIN 126 (310)
T ss_pred hHHHHHHHcCCCeEEeCCCccccCCCCcHHHHHHHHHhh-----hheEEEecc--cHHHHHHHHHh----CC---CceEc
Confidence 3456788899998766421 111234444444444 889998644 33333332221 11 22233
Q ss_pred eeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC-------------
Q 017679 199 IGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL------------- 265 (368)
Q Consensus 199 ~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~------------- 265 (368)
+.++.+.||-..|=+--++++.-.++|++++=+|-|+.|+..+....+..|..|+++.-+
T Consensus 127 -------gLtD~~HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ia~Pk~~~p~~~~~~~a~ 199 (310)
T COG0078 127 -------GLTDEFHPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVRIATPKGYEPDPEVVEKAK 199 (310)
T ss_pred -------ccccccCcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEEEECCCcCCcCHHHHHHHH
Confidence 236778899999966666666556999999999999999999998888999999998532
Q ss_pred ------------CCCHhhhccCCCEEEEec
Q 017679 266 ------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 266 ------------t~~L~~~~~~ADIVIsAv 283 (368)
|.|..+.++.||+|.+-+
T Consensus 200 ~~a~~~g~~i~~t~d~~eAv~gADvvyTDv 229 (310)
T COG0078 200 ENAKESGGKITLTEDPEEAVKGADVVYTDV 229 (310)
T ss_pred HHHHhcCCeEEEecCHHHHhCCCCEEEecC
Confidence 357888999999999655
No 251
>PRK12939 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.048 Score=50.07 Aligned_cols=37 Identities=30% Similarity=0.366 Sum_probs=32.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|.++|++|.++.+.
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCC
Confidence 3679999999998888999999999999998888654
No 252
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.94 E-value=0.058 Score=50.50 Aligned_cols=37 Identities=27% Similarity=0.258 Sum_probs=33.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~ 42 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIH 42 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998888999999999999999888654
No 253
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=94.94 E-value=0.041 Score=50.71 Aligned_cols=79 Identities=23% Similarity=0.372 Sum_probs=49.3
Q ss_pred CccceEEEEc----------------cCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhhhc
Q 017679 230 IMGKNAVVIG----------------RSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQIT 273 (368)
Q Consensus 230 l~GK~VvVIG----------------~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~~~ 273 (368)
|+||+|+|-+ .||-.|..+|..+..+||.|+++|..+. .+.+.+
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELL 80 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHG
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhcccc
Confidence 4788888875 4455699999999999999999997641 134667
Q ss_pred cCCCEEEEecCCCCccc----CCCcCC---CcEEEEeecCCC
Q 017679 274 SEADIVIAAAGVANLVR----GSWLKP---GAVVLDVGTCPV 308 (368)
Q Consensus 274 ~~ADIVIsAvG~p~~I~----~e~ik~---gavVIDvg~n~~ 308 (368)
.++|++|.|+....|-. ..-+++ ....+.+--+|.
T Consensus 81 ~~~Di~I~aAAVsDf~p~~~~~~KIkK~~~~~l~l~L~~~pk 122 (185)
T PF04127_consen 81 PSADIIIMAAAVSDFRPEEPAEGKIKKSSGDELTLELKPTPK 122 (185)
T ss_dssp GGGSEEEE-SB--SEEESCHHSS-G---TT-CEEEEEEE-GG
T ss_pred CcceeEEEecchhheeehhccccccccccCcceEEEEEeChH
Confidence 88999998888777632 234663 357777777663
No 254
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.93 E-value=0.026 Score=52.47 Aligned_cols=38 Identities=21% Similarity=0.278 Sum_probs=34.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~ 43 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA 43 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH
Confidence 47899999999999999999999999999999988763
No 255
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=94.90 E-value=0.15 Score=53.50 Aligned_cols=156 Identities=17% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCC---CCCCHHHHHhcCCccc------
Q 017679 119 QTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLP---QHLDEGKILDAVSLEK------ 189 (368)
Q Consensus 119 ~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp---~~id~~~il~~I~p~K------ 189 (368)
.+|++--.+.|+++|+ ++.+.++.++.|+.| |.....|=+ .|--.......+.-.+
T Consensus 227 Iaf~NEla~lce~~gi--------------D~~eV~~~~~~d~ri-g~~~l~PG~G~GG~ClpkD~~~L~~~a~~~g~~~ 291 (473)
T PLN02353 227 ISSVNAMSALCEATGA--------------DVSQVSHAVGKDSRI-GPKFLNASVGFGGSCFQKDILNLVYICECNGLPE 291 (473)
T ss_pred HHHHHHHHHHHHHhCC--------------CHHHHHHHhCCCCcC-CCCCCCCCCCCCCcchhhhHHHHHHHHHHcCCch
Q ss_pred ---ccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhCCCCccceEEEEc----------cCccchHHHHHHHhhCC
Q 017679 190 ---DVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSGVEIMGKNAVVIG----------RSNIVGLPTSLLLQRHH 256 (368)
Q Consensus 190 ---DVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG----------~g~~VGrpla~lL~~~g 256 (368)
-++.+...|...-. .-+-++.+...-++.|++|+|+| |.-. ...++..|.++|
T Consensus 292 ~~~l~~~~~~iN~~~~~-------------~vv~~~~~~l~~~~~~~~VavlGlafK~~tdD~R~Sp-a~~li~~L~~~G 357 (473)
T PLN02353 292 VAEYWKQVIKMNDYQKS-------------RFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETP-AIDVCKGLLGDK 357 (473)
T ss_pred HHHHHHHHHHHHHhhHH-------------HHHHHHHHHhhcccCCCEEEEEeeeecCCCCccccCh-HHHHHHHHHhCC
Q ss_pred CEEEEEeCC------------------------------------CCCHhhhccCCCEEEEecCCCCc--cc----CCCc
Q 017679 257 ATVSIVHAL------------------------------------TKNPEQITSEADIVIAAAGVANL--VR----GSWL 294 (368)
Q Consensus 257 AtVti~h~~------------------------------------t~~L~~~~~~ADIVIsAvG~p~~--I~----~e~i 294 (368)
++|.+..-. ..++.+.++.||+||.+|..+.| ++ .+.+
T Consensus 358 ~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~vvi~t~~~ef~~l~~~~~~~~m 437 (473)
T PLN02353 358 AKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAVKQVSVVWDAYEATKGAHGICILTEWDEFKTLDYQKIYDNM 437 (473)
T ss_pred CEEEEECCCCChHHHHHHhhcccccccccccccccccccccceeeeCCHHHHhcCCCEEEECCCChHhcccCHHHHHHhc
Q ss_pred CCCcEEEEe
Q 017679 295 KPGAVVLDV 303 (368)
Q Consensus 295 k~gavVIDv 303 (368)
++..+|||.
T Consensus 438 ~~~~~viD~ 446 (473)
T PLN02353 438 QKPAFVFDG 446 (473)
T ss_pred cCCCEEEEC
No 256
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.89 E-value=0.06 Score=52.96 Aligned_cols=70 Identities=24% Similarity=0.344 Sum_probs=51.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC------------------------------CCHhhhccCCCEEEEe
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT------------------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t------------------------------~~L~~~~~~ADIVIsA 282 (368)
.+|+|||.|.+ |.++|..|++.|.+|+++.+.. .+. +.+..+|+||.+
T Consensus 3 mkI~IiG~G~m-G~~~A~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~ 80 (341)
T PRK08229 3 ARICVLGAGSI-GCYLGGRLAAAGADVTLIGRARIGDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVT 80 (341)
T ss_pred ceEEEECCCHH-HHHHHHHHHhcCCcEEEEecHHHHHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEE
Confidence 47999999875 9999999999999999987631 011 345789999999
Q ss_pred cCCCCc---cc--CCCcCCCcEEEEee
Q 017679 283 AGVANL---VR--GSWLKPGAVVLDVG 304 (368)
Q Consensus 283 vG~p~~---I~--~e~ik~gavVIDvg 304 (368)
+..+.. +. ...++++.+|+++-
T Consensus 81 vk~~~~~~~~~~l~~~~~~~~iii~~~ 107 (341)
T PRK08229 81 VKSAATADAAAALAGHARPGAVVVSFQ 107 (341)
T ss_pred ecCcchHHHHHHHHhhCCCCCEEEEeC
Confidence 976543 11 12457788898883
No 257
>PRK08339 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.026 Score=53.38 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=34.3
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999998765
No 258
>PTZ00317 NADP-dependent malic enzyme; Provisional
Probab=94.87 E-value=0.059 Score=57.40 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=76.4
Q ss_pred ccccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhh----CCC-------EEEEEeCC-------------
Q 017679 210 LFIPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQR----HHA-------TVSIVHAL------------- 265 (368)
Q Consensus 210 ~~~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~----~gA-------tVti~h~~------------- 265 (368)
|---++-.|++..++-.+.+|+..++++.|+|.+ |..+|.+|.. .|. .+++++++
T Consensus 275 GTaaV~lAgll~Alr~~g~~l~d~riv~~GAGsA-giGia~ll~~~m~~~Gls~eeA~~~i~~vD~~GLl~~~r~~~l~~ 353 (559)
T PTZ00317 275 GTGAVIAAGFLNALKLSGVPPEEQRIVFFGAGSA-AIGVANNIADLAAEYGVTREEALKSFYLVDSKGLVTTTRGDKLAK 353 (559)
T ss_pred hHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHH-HHHHHHHHHHHHHHcCCChhHhcCeEEEEcCCCeEeCCCCccccH
Confidence 3335677889999999999999999999999988 9999998874 665 68888653
Q ss_pred ----------------CCCHhhhccCC--CEEEEecCCCCcccCCCcC------CCcEEEEeecCC
Q 017679 266 ----------------TKNPEQITSEA--DIVIAAAGVANLVRGSWLK------PGAVVLDVGTCP 307 (368)
Q Consensus 266 ----------------t~~L~~~~~~A--DIVIsAvG~p~~I~~e~ik------~gavVIDvg~n~ 307 (368)
..+|.+.++.+ |++|-+.|.|+.+++++++ +.-+|+=++ ||
T Consensus 354 ~k~~fa~~~~~~~~~~~~~L~e~v~~~KPtvLIG~S~~~g~Ft~evv~~Ma~~~~rPIIFaLS-NP 418 (559)
T PTZ00317 354 HKVPFARTDISAEDSSLKTLEDVVRFVKPTALLGLSGVGGVFTEEVVKTMASNVERPIIFPLS-NP 418 (559)
T ss_pred HHHHHhccccccccccCCCHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC-CC
Confidence 11577888888 9999999999999998875 356776666 44
No 259
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=94.87 E-value=0.03 Score=55.05 Aligned_cols=58 Identities=34% Similarity=0.452 Sum_probs=43.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEE----------------eCCC----------CCHhhhccCCCEEEEe
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV----------------HALT----------KNPEQITSEADIVIAA 282 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~----------------h~~t----------~~L~~~~~~ADIVIsA 282 (368)
.-.+.||.|+|+++-+|+|++++|. ++-.|+-. |-.| ++|++.++.||+||-+
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIP 103 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIP 103 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEec
Confidence 3457799999999889999998775 44333333 3322 4689999999999999
Q ss_pred cCCCC
Q 017679 283 AGVAN 287 (368)
Q Consensus 283 vG~p~ 287 (368)
+|.|.
T Consensus 104 AGVPR 108 (345)
T KOG1494|consen 104 AGVPR 108 (345)
T ss_pred CCCCC
Confidence 99765
No 260
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=94.87 E-value=0.12 Score=52.25 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=68.6
Q ss_pred ccceEEEEccCccchHHHHHHHhh-CCCE---EEEEeCCC----------C-------CHhhhccCCCEEEEecCCCC--
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQR-HHAT---VSIVHALT----------K-------NPEQITSEADIVIAAAGVAN-- 287 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~-~gAt---Vti~h~~t----------~-------~L~~~~~~ADIVIsAvG~p~-- 287 (368)
.+.+|.|||++|.||+-+..+|.+ .+.. +..+.+.. . +. +..++.|+|+.|+|.--
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~~~-~~~~~~Divf~a~~~~~s~ 82 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEAKI-NSFEGVDIAFFSAGGEVSR 82 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeCCH-HHhcCCCEEEECCChHHHH
Confidence 356899999999999999999995 5554 55554431 0 11 23478999999986421
Q ss_pred cccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHH
Q 017679 288 LVRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLL 354 (368)
Q Consensus 288 ~I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl 354 (368)
-+-+...+.|++|||.+....- ++.. .-.+-.|.-+...+..+ +-..|| -.|++|++
T Consensus 83 ~~~~~~~~~G~~VID~Ss~fR~---~~~v---plvvPEvN~e~i~~~~~-iIanPn---C~tt~~~l 139 (347)
T PRK06728 83 QFVNQAVSSGAIVIDNTSEYRM---AHDV---PLVVPEVNAHTLKEHKG-IIAVPN---CSALQMVT 139 (347)
T ss_pred HHHHHHHHCCCEEEECchhhcC---CCCC---CeEeCCcCHHHHhccCC-EEECCC---CHHHHHHH
Confidence 1222334679999999976542 1111 12344555444433224 335676 56666663
No 261
>KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism]
Probab=94.87 E-value=0.048 Score=54.90 Aligned_cols=170 Identities=19% Similarity=0.260 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhc-CCcccccCcc-Cc
Q 017679 119 QTYVRNKIKACEEVGIKSIVTEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDA-VSLEKDVDGF-HP 196 (368)
Q Consensus 119 ~~Yv~~k~k~a~~~GI~~~~~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~-I~p~KDVDgl-~~ 196 (368)
+.|-+.=.+..++-|++.+.+. +.+.+|+...| .+.|+++|.--- +++ .+++++ -.--|=|... .-
T Consensus 13 e~~~~~~~~~l~~~g~~v~~~~---~~~~eel~~~i------~~~~aviVrs~t--kvt-advl~aa~~~lkvVgrag~G 80 (406)
T KOG0068|consen 13 ESLDQACIEILKDNGYQVEFKK---NLSLEELIEKI------KDCDALIVRSKT--KVT-ADVLEAAAGGLKVVGRAGIG 80 (406)
T ss_pred cccchHHHHHHHhcCceEEEec---cCCHHHHHHHh------ccCCEEEEEeCC--eec-HHHHHhhcCCeEEEEecccC
Confidence 3455556677888888876553 34555776666 357889987653 354 355553 2223333222 11
Q ss_pred cee---------eeccccCCcCccccCCHHHHHHH-------H-------------------HHhCCCCccceEEEEccC
Q 017679 197 LNI---------GNLAMRGREPLFIPCTPKGCIEL-------L-------------------IRSGVEIMGKNAVVIGRS 241 (368)
Q Consensus 197 ~N~---------G~L~~g~~~~~~~PcTa~gv~~l-------L-------------------~~~~i~l~GK~VvVIG~g 241 (368)
+|. |-+..+ .|. ..+.++-|+ | +..|.++.||+.-|+|.|
T Consensus 81 ~dNVDL~AAte~gi~Vvn--~P~---~Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~G~el~GKTLgvlG~G 155 (406)
T KOG0068|consen 81 VDNVDLKAATENGILVVN--TPT---ANSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYLGWELRGKTLGVLGLG 155 (406)
T ss_pred ccccChhhHHhCCeEEEe--CCC---CChHHHHHHHHHHHHHHhhhcchhheeeecCceeecceeeeEEeccEEEEeecc
Confidence 111 111111 111 123333332 1 233678999999999999
Q ss_pred ccchHHHHHHHhhCCCEEEEEeCCC------------CCHhhhccCCCEEEEecC-CC---CcccCC---CcCCCcEEEE
Q 017679 242 NIVGLPTSLLLQRHHATVSIVHALT------------KNPEQITSEADIVIAAAG-VA---NLVRGS---WLKPGAVVLD 302 (368)
Q Consensus 242 ~~VGrpla~lL~~~gAtVti~h~~t------------~~L~~~~~~ADIVIsAvG-~p---~~I~~e---~ik~gavVID 302 (368)
.+ |.-+|..+...|..|...+--+ -.++|.+..||+|-.-++ .| +++..+ .+|+|..||.
T Consensus 156 rI-GseVA~r~k~~gm~vI~~dpi~~~~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVriIN 234 (406)
T KOG0068|consen 156 RI-GSEVAVRAKAMGMHVIGYDPITPMALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVRIIN 234 (406)
T ss_pred cc-hHHHHHHHHhcCceEEeecCCCchHHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcEEEE
Confidence 97 9999999999999888776544 257899999999886665 23 356554 4589999999
Q ss_pred eecC
Q 017679 303 VGTC 306 (368)
Q Consensus 303 vg~n 306 (368)
++--
T Consensus 235 ~aRG 238 (406)
T KOG0068|consen 235 VARG 238 (406)
T ss_pred ecCC
Confidence 8754
No 262
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.86 E-value=0.023 Score=53.45 Aligned_cols=77 Identities=16% Similarity=0.294 Sum_probs=54.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-----------------------------------------
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT----------------------------------------- 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t----------------------------------------- 266 (368)
.|++++|+|+|.|++ |..++..|.+.|. ++++++...
T Consensus 18 ~L~~~~VlivG~Ggl-Gs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGAGGL-GSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 468899999999996 9999999999996 788874210
Q ss_pred ------CCHhhhccCCCEEEEecCCCCc---ccCCCcCCCcEEEEeecC
Q 017679 267 ------KNPEQITSEADIVIAAAGVANL---VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 267 ------~~L~~~~~~ADIVIsAvG~p~~---I~~e~ik~gavVIDvg~n 306 (368)
.++.+.++++|+||.++..+.. +..-..+.+.-+|+.|..
T Consensus 97 ~~~i~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~~ 145 (228)
T cd00757 97 NERLDAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAVL 145 (228)
T ss_pred cceeCHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 1234567889999999886542 332223445556666654
No 263
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=94.85 E-value=0.051 Score=49.50 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=26.4
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+|.|||+|.. |+.+|.+++..|..|+++..+
T Consensus 1 ~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~ 31 (180)
T PF02737_consen 1 KVAVIGAGTM-GRGIAALFARAGYEVTLYDRS 31 (180)
T ss_dssp EEEEES-SHH-HHHHHHHHHHTTSEEEEE-SS
T ss_pred CEEEEcCCHH-HHHHHHHHHhCCCcEEEEECC
Confidence 6899999875 999999999999999999764
No 264
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=94.83 E-value=0.11 Score=53.10 Aligned_cols=95 Identities=20% Similarity=0.304 Sum_probs=63.6
Q ss_pred cCCHHHHHHHHHHh---CCCCccceEEEEccC----------------ccchHHHHHHHhhCCCEEEEEeCCC-------
Q 017679 213 PCTPKGCIELLIRS---GVEIMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALT------- 266 (368)
Q Consensus 213 PcTa~gv~~lL~~~---~i~l~GK~VvVIG~g----------------~~VGrpla~lL~~~gAtVti~h~~t------- 266 (368)
++++.-++..+.+. +-+++||+|+|.|.+ |-.|..+|..|..+||+|+++++..
T Consensus 163 ~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~ 242 (390)
T TIGR00521 163 LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPG 242 (390)
T ss_pred CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCC
Confidence 56667766665543 246999999999873 3459999999999999999988542
Q ss_pred ---------CCH-h----hhccCCCEEEEecCCCCccc----CCCcCC--CcEEEEeecCC
Q 017679 267 ---------KNP-E----QITSEADIVIAAAGVANLVR----GSWLKP--GAVVLDVGTCP 307 (368)
Q Consensus 267 ---------~~L-~----~~~~~ADIVIsAvG~p~~I~----~e~ik~--gavVIDvg~n~ 307 (368)
.++ + +...+.|++|.++|...+-. ..-+++ +...+.+--+|
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~p 303 (390)
T TIGR00521 243 VKSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNP 303 (390)
T ss_pred cEEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCc
Confidence 122 2 23356899999998766522 222443 23455655554
No 265
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.033 Score=52.15 Aligned_cols=39 Identities=36% Similarity=0.421 Sum_probs=35.1
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+++||.++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~ 42 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE 42 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468899999999998899999999999999999987753
No 266
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=94.78 E-value=0.042 Score=50.66 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~ 38 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc
Confidence 4789999999998889999999999999999888664
No 267
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.031 Score=52.13 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=33.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~ 40 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLD 40 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999889999999999999999988764
No 268
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.77 E-value=0.064 Score=51.92 Aligned_cols=93 Identities=13% Similarity=-0.039 Sum_probs=59.8
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------CCHhhh
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------KNPEQI 272 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------~~L~~~ 272 (368)
||........|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+.. .++.+.
T Consensus 120 ~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~ 199 (325)
T TIGR02825 120 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEET 199 (325)
T ss_pred ccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHH
Confidence 443344444443333334689999999877789999999999999887665421 122221
Q ss_pred c-----cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeec
Q 017679 273 T-----SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGT 305 (368)
Q Consensus 273 ~-----~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~ 305 (368)
+ +..|+|+.++|.+.+ ---++++++..++.+|.
T Consensus 200 ~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~ 238 (325)
T TIGR02825 200 LKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 238 (325)
T ss_pred HHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecc
Confidence 1 236888888886543 12346788878888875
No 269
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.031 Score=51.85 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=34.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++.+|+.++..|+++|++|.++.|+.
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 41 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA 41 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 47899999999999999999999999999999887763
No 270
>PLN02253 xanthoxin dehydrogenase
Probab=94.76 E-value=0.055 Score=51.13 Aligned_cols=37 Identities=32% Similarity=0.472 Sum_probs=33.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4689999999999889999999999999999888654
No 271
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.035 Score=51.18 Aligned_cols=38 Identities=26% Similarity=0.385 Sum_probs=34.0
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~ 39 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA 39 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH
Confidence 47899999999999999999999999999998886653
No 272
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=94.73 E-value=0.034 Score=58.14 Aligned_cols=72 Identities=19% Similarity=0.283 Sum_probs=52.8
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh---ccCCCEEEEecCCCCc---
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI---TSEADIVIAAAGVANL--- 288 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~---~~~ADIVIsAvG~p~~--- 288 (368)
++.+||.|.. |.++|..|+++|.+|++.+++.. ++++. ++++|+||..+.....
T Consensus 1 ~IG~IGLG~M-G~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~ 79 (467)
T TIGR00873 1 DIGVIGLAVM-GSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDA 79 (467)
T ss_pred CEEEEeeHHH-HHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHH
Confidence 3789999886 99999999999999999987531 12222 2468999988765332
Q ss_pred -cc--CCCcCCCcEEEEeecC
Q 017679 289 -VR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 289 -I~--~e~ik~gavVIDvg~n 306 (368)
+. ...+++|.+|||.|..
T Consensus 80 Vi~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 80 VINQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred HHHHHHhhCCCCCEEEECCCc
Confidence 21 1357889999999963
No 273
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.03 Score=52.13 Aligned_cols=38 Identities=26% Similarity=0.343 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||.++|.|+++-+|+.++..|+++|++|.++.+..
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL 43 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 47899999999988889999999999999999987753
No 274
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.72 E-value=0.14 Score=47.39 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
.++.++|+|+|.|+ +|-.++..|...|. ++++++..
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 46889999999999 59999999999996 79999644
No 275
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=94.71 E-value=0.041 Score=51.56 Aligned_cols=37 Identities=16% Similarity=0.203 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 38 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKS 38 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999999999888999999999999999998765
No 276
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.049 Score=50.51 Aligned_cols=37 Identities=16% Similarity=0.210 Sum_probs=34.0
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++|+++|+|+++.+|+.++..|+++|++|+++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~ 44 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVS 44 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 4799999999999999999999999999999888765
No 277
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.68 E-value=0.037 Score=51.62 Aligned_cols=39 Identities=28% Similarity=0.331 Sum_probs=34.9
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+++||+++|.|+++.+|..++..|+++|++|+++.+..
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~ 46 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA 46 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 457899999999988899999999999999999987753
No 278
>PRK06057 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.035 Score=51.76 Aligned_cols=38 Identities=29% Similarity=0.339 Sum_probs=34.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.++||+++|+|+++-+|+.++..|+++|++|+++.++.
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~ 41 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP 41 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 37899999999988899999999999999999987654
No 279
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.68 E-value=0.065 Score=49.92 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=32.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|.++|++|.++.++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999998889999999999999999887554
No 280
>PRK08265 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.04 Score=51.78 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA 40 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999988889999999999999999987753
No 281
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.67 E-value=0.052 Score=50.64 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=34.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999999999999999999999999888665
No 282
>PRK08628 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.047 Score=50.77 Aligned_cols=39 Identities=23% Similarity=0.248 Sum_probs=34.8
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++++||+++|+|+++-+|+.++..|+++|+.|.++.+.
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~ 40 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS 40 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCC
Confidence 367899999999999889999999999999998887654
No 283
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.63 E-value=0.2 Score=54.15 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=31.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
-.||+|+|||+|-+ |...|..|.+.|++|+|+.+.
T Consensus 325 ~~~~~VaIIGaGpA-GLsaA~~L~~~G~~V~V~E~~ 359 (654)
T PRK12769 325 KSDKRVAIIGAGPA-GLACADVLARNGVAVTVYDRH 359 (654)
T ss_pred cCCCEEEEECCCHH-HHHHHHHHHHCCCeEEEEecC
Confidence 36899999999987 999999999999999999753
No 284
>PRK05717 oxidoreductase; Validated
Probab=94.60 E-value=0.04 Score=51.35 Aligned_cols=39 Identities=21% Similarity=0.160 Sum_probs=34.5
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
...++||+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCC
Confidence 456899999999999889999999999999999988543
No 285
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=94.59 E-value=0.047 Score=52.11 Aligned_cols=35 Identities=11% Similarity=0.312 Sum_probs=30.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~ 264 (368)
.|++++|+|+|.|++ |..++..|.+.|. ++++++.
T Consensus 21 ~L~~~~VlvvG~Ggl-Gs~va~~La~~Gvg~i~lvD~ 56 (240)
T TIGR02355 21 ALKASRVLIVGLGGL-GCAASQYLAAAGVGNLTLLDF 56 (240)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 467899999999996 9999999999996 7888853
No 286
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=94.59 E-value=0.14 Score=50.30 Aligned_cols=82 Identities=15% Similarity=0.187 Sum_probs=57.3
Q ss_pred HHHhCCCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhhhcc---CCCEE
Q 017679 223 LIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQITS---EADIV 279 (368)
Q Consensus 223 L~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~~~~---~ADIV 279 (368)
+++.+. ..|++|+|+|+| .||..+++++...|+ .|+++.+.. .++.+.++ ..|+|
T Consensus 162 l~~~~~-~~g~~VlV~G~G-~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~v 239 (343)
T PRK09880 162 AHQAGD-LQGKRVFVSGVG-PIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVS 239 (343)
T ss_pred HHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEE
Confidence 444433 379999999986 469999999999998 576664321 12333222 27999
Q ss_pred EEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679 280 IAAAGVANLV--RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 280 IsAvG~p~~I--~~e~ik~gavVIDvg~n 306 (368)
|.++|.+..+ --+.+++|-.++.+|..
T Consensus 240 id~~G~~~~~~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 240 FEVSGHPSSINTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 9999986543 24578898899999964
No 287
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=94.58 E-value=0.075 Score=50.73 Aligned_cols=92 Identities=17% Similarity=0.264 Sum_probs=61.8
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCC-----------------CHh----
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-----------------NPE---- 270 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~-----------------~L~---- 270 (368)
+|....+...+++.+. ..|++|+|+|.|. +|..+++++...|++ |+++.+... +..
T Consensus 103 ~~~~~ta~~al~~~~~-~~g~~VlV~G~G~-vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~ 180 (280)
T TIGR03366 103 GCATATVMAALEAAGD-LKGRRVLVVGAGM-LGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQG 180 (280)
T ss_pred hhHHHHHHHHHHhccC-CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHH
Confidence 4443444455555544 3899999999875 699999999999986 776643211 111
Q ss_pred hhc--cCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679 271 QIT--SEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 271 ~~~--~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n 306 (368)
+.+ +.+|++|.++|.+..+ --+.++++..++.+|..
T Consensus 181 ~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 181 GLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence 111 2489999999977643 23577888888888853
No 288
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=94.53 E-value=0.058 Score=54.12 Aligned_cols=75 Identities=24% Similarity=0.315 Sum_probs=52.3
Q ss_pred ceEEEEccCccchHHHHHHHhhC-CCEEE-EEeCCC---C--------------------CHhhhccCCCEEEEecCCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRH-HATVS-IVHALT---K--------------------NPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~-gAtVt-i~h~~t---~--------------------~L~~~~~~ADIVIsAvG~p~ 287 (368)
.+|.|+|++|.+|+-++.+|.++ +.++. ++.++. + +..+...++|+||.|++...
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~ 80 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGV 80 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchH
Confidence 37999999889999999999987 56766 544331 1 11233358999999997432
Q ss_pred --cccCCCcCCCcEEEEeecCC
Q 017679 288 --LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 --~I~~e~ik~gavVIDvg~n~ 307 (368)
-+-+...+.|..|||++...
T Consensus 81 s~~~~~~~~~~G~~VIDlS~~f 102 (346)
T TIGR01850 81 SAELAPELLAAGVKVIDLSADF 102 (346)
T ss_pred HHHHHHHHHhCCCEEEeCChhh
Confidence 12333456799999999764
No 289
>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=94.52 E-value=0.084 Score=52.92 Aligned_cols=71 Identities=23% Similarity=0.281 Sum_probs=54.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------CCCHhhhccCCCEEEEecC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------TKNPEQITSEADIVIAAAG 284 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------t~~L~~~~~~ADIVIsAvG 284 (368)
++|.|||+|.. |.++|..|.+.|..|++-.++ |.|+.+.+..||+|+.+++
T Consensus 2 ~kI~ViGaGsw-GTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP 80 (329)
T COG0240 2 MKIAVIGAGSW-GTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP 80 (329)
T ss_pred ceEEEEcCChH-HHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence 57999999987 999999999999988887542 3478899999999999998
Q ss_pred CCCc---cc--CCCcCCCcEEEEee
Q 017679 285 VANL---VR--GSWLKPGAVVLDVG 304 (368)
Q Consensus 285 ~p~~---I~--~e~ik~gavVIDvg 304 (368)
+-.+ ++ ...+++++.++-+.
T Consensus 81 s~~~r~v~~~l~~~l~~~~~iv~~s 105 (329)
T COG0240 81 SQALREVLRQLKPLLLKDAIIVSAT 105 (329)
T ss_pred hHHHHHHHHHHhhhccCCCeEEEEe
Confidence 6332 11 14566777666654
No 290
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.52 E-value=0.079 Score=48.88 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.8
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~ 41 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA 41 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999999888999999999999999888654
No 291
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.037 Score=51.27 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=32.9
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAART 38 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCC
Confidence 578999999999999999999999999999988764
No 292
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=94.50 E-value=0.1 Score=51.89 Aligned_cols=56 Identities=23% Similarity=0.383 Sum_probs=43.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC--------------------------CCHhhhccCCCEEEEe
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT--------------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t--------------------------~~L~~~~~~ADIVIsA 282 (368)
++.+||+|||+|. ||..++..|+..| ++|.++.... .++ +.+++||+||.+
T Consensus 4 ~~~~KI~IIGaG~-vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~t 81 (321)
T PTZ00082 4 IKRRKISLIGSGN-IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVT 81 (321)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEEC
Confidence 3557999999877 5999999999888 4877776432 244 578999999999
Q ss_pred cCCCC
Q 017679 283 AGVAN 287 (368)
Q Consensus 283 vG~p~ 287 (368)
+|.|.
T Consensus 82 ag~~~ 86 (321)
T PTZ00082 82 AGLTK 86 (321)
T ss_pred CCCCC
Confidence 98653
No 293
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.50 E-value=0.14 Score=48.80 Aligned_cols=93 Identities=16% Similarity=0.122 Sum_probs=60.9
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHh---
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPE--- 270 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~--- 270 (368)
++.+..++..++...+ -.|.+|+|.|.++.+|..+++++...|++|+++.+.. .++.
T Consensus 122 ~~~~~ta~~~~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 200 (324)
T cd08292 122 IAMPLSALMLLDFLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKV 200 (324)
T ss_pred cccHHHHHHHHHhhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHH
Confidence 4444444444544322 3689999999988889999999999999877664322 1111
Q ss_pred -hhc--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 271 -QIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 271 -~~~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
+.+ +..|+|+.++|.+..- --+.++++..++++|..
T Consensus 201 ~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 201 REAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred HHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecC
Confidence 122 2489999888875331 23456778888888853
No 294
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=94.50 E-value=0.06 Score=53.58 Aligned_cols=75 Identities=13% Similarity=0.135 Sum_probs=52.4
Q ss_pred ceEEEEccCccchHHHHHHHhhCC-CEEEEEeCCC----CCHhhhccCCCEEEEecCCCC--cccCCCcCCCcEEEEeec
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHALT----KNPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT 305 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~t----~~L~~~~~~ADIVIsAvG~p~--~I~~e~ik~gavVIDvg~ 305 (368)
-+|.|+|++|.+|.-+..+|.++. .++.-..+.. .+..+.+.++|++|.|++.-. -+-+.....|..|||.+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~~~~~~~~~~~~~D~vFlalp~~~s~~~~~~~~~~g~~VIDlSa 81 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRKDAAERAKLLNAADVAILCLPDDAAREAVSLVDNPNTCIIDAST 81 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccccCcCCHhHhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 379999999999999999999885 4544443332 234556688999999986321 111223356899999986
Q ss_pred CC
Q 017679 306 CP 307 (368)
Q Consensus 306 n~ 307 (368)
..
T Consensus 82 df 83 (310)
T TIGR01851 82 AY 83 (310)
T ss_pred HH
Confidence 54
No 295
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.49 E-value=0.073 Score=52.11 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=43.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------------CCHhhhcc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 274 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------------~~L~~~~~ 274 (368)
++|.|||.|-+ |.++|..|+++|.+|++++++. .++.+.++
T Consensus 3 ~~V~VIG~G~m-G~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~ 81 (308)
T PRK06129 3 GSVAIIGAGLI-GRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA 81 (308)
T ss_pred cEEEEECccHH-HHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence 47999997765 9999999999999999997652 23445678
Q ss_pred CCCEEEEecCCC
Q 017679 275 EADIVIAAAGVA 286 (368)
Q Consensus 275 ~ADIVIsAvG~p 286 (368)
++|+||.++...
T Consensus 82 ~ad~Vi~avpe~ 93 (308)
T PRK06129 82 DADYVQESAPEN 93 (308)
T ss_pred CCCEEEECCcCC
Confidence 999999998653
No 296
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.48 E-value=0.11 Score=49.90 Aligned_cols=93 Identities=15% Similarity=-0.001 Sum_probs=60.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhc
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQIT 273 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~ 273 (368)
|+.....+..|.+..-.-.|.+|+|.|+++.||..++.++...|++|+.+.+.. .++.+.+
T Consensus 125 ~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v 204 (329)
T cd08294 125 GMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEAL 204 (329)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHH
Confidence 454455555554433334799999999877889999999999999887655321 1222211
Q ss_pred -----cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679 274 -----SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT 305 (368)
Q Consensus 274 -----~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~ 305 (368)
...|+|+.++|.+.+- .-+.++++..++.+|.
T Consensus 205 ~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 205 KEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcc
Confidence 2368888888764321 2345677777777774
No 297
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=94.46 E-value=0.085 Score=53.86 Aligned_cols=71 Identities=27% Similarity=0.357 Sum_probs=51.6
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------CCHhhhccCCCEEEE
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------KNPEQITSEADIVIA 281 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------~~L~~~~~~ADIVIs 281 (368)
+|.|||.|- ||.|+|.+|+ .|.+|+.++++. .+..+..++||+||.
T Consensus 2 kI~VIGlGy-vGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii 79 (388)
T PRK15057 2 KITISGTGY-VGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVII 79 (388)
T ss_pred EEEEECCCH-HHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEE
Confidence 689999886 5999998777 489999997642 112344689999999
Q ss_pred ecCCCC----------ccc------CCCcCCCcEEEEeecCC
Q 017679 282 AAGVAN----------LVR------GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 282 AvG~p~----------~I~------~e~ik~gavVIDvg~n~ 307 (368)
+++.|- .+. .. +++|.+||+-++-+
T Consensus 80 ~Vpt~~~~k~~~~dl~~v~~v~~~i~~-~~~g~lVV~~STv~ 120 (388)
T PRK15057 80 ATPTDYDPKTNYFNTSSVESVIKDVVE-INPYAVMVIKSTVP 120 (388)
T ss_pred eCCCCCccCCCCcChHHHHHHHHHHHh-cCCCCEEEEeeecC
Confidence 999761 111 12 47899999887655
No 298
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=94.46 E-value=0.083 Score=50.58 Aligned_cols=53 Identities=28% Similarity=0.362 Sum_probs=41.5
Q ss_pred EEEEccCccchHHHHHHHhhCC----CEEEEEeCC-------------------------CCCHhhhccCCCEEEEecCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHH----ATVSIVHAL-------------------------TKNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~-------------------------t~~L~~~~~~ADIVIsAvG~ 285 (368)
|+|||+|+.+|..++..|+..| .+|+++..+ +.++++.+++||+||.++|.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~ 80 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV 80 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence 5799996678999999998888 578877543 23556888999999999986
Q ss_pred CC
Q 017679 286 AN 287 (368)
Q Consensus 286 p~ 287 (368)
|.
T Consensus 81 ~~ 82 (263)
T cd00650 81 GR 82 (263)
T ss_pred CC
Confidence 53
No 299
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.45 E-value=0.056 Score=52.39 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=28.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++|.|||.|.+ |.++|..|++.|..|++++++
T Consensus 4 ~~I~ViGaG~m-G~~iA~~la~~G~~V~l~d~~ 35 (291)
T PRK06035 4 KVIGVVGSGVM-GQGIAQVFARTGYDVTIVDVS 35 (291)
T ss_pred cEEEEECccHH-HHHHHHHHHhcCCeEEEEeCC
Confidence 68999999876 999999999999999999764
No 300
>PRK08223 hypothetical protein; Validated
Probab=94.45 E-value=0.075 Score=52.34 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=31.0
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~ 264 (368)
.|+.++|+|||.|+. |-+++.+|++.|. ++++++.
T Consensus 24 kL~~s~VlIvG~GGL-Gs~va~~LA~aGVG~i~lvD~ 59 (287)
T PRK08223 24 RLRNSRVAIAGLGGV-GGIHLLTLARLGIGKFTIADF 59 (287)
T ss_pred HHhcCCEEEECCCHH-HHHHHHHHHHhCCCeEEEEeC
Confidence 478899999999996 9999999999996 8888853
No 301
>PRK06476 pyrroline-5-carboxylate reductase; Reviewed
Probab=94.44 E-value=0.059 Score=51.27 Aligned_cols=71 Identities=20% Similarity=0.244 Sum_probs=49.6
Q ss_pred eEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC----------------CCHhhhccCCCEEEEecCCCC---cccC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT----------------KNPEQITSEADIVIAAAGVAN---LVRG 291 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~---~I~~ 291 (368)
++.+||.|.+ |.+++..|.+.|. .+.+++++. .+..+.++++|+||.++.... ++..
T Consensus 2 ~IgiIG~G~m-G~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~~~vl~~ 80 (258)
T PRK06476 2 KIGFIGTGAI-TEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80 (258)
T ss_pred eEEEECcCHH-HHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHHHHHHHH
Confidence 5899999886 9999999988774 356666532 244556789999999998322 1222
Q ss_pred CCcCCCcEEEEeec
Q 017679 292 SWLKPGAVVLDVGT 305 (368)
Q Consensus 292 e~ik~gavVIDvg~ 305 (368)
-++++|.+||++.-
T Consensus 81 l~~~~~~~vis~~a 94 (258)
T PRK06476 81 LRFRPGQTVISVIA 94 (258)
T ss_pred hccCCCCEEEEECC
Confidence 24567888888763
No 302
>PRK05872 short chain dehydrogenase; Provisional
Probab=94.42 E-value=0.038 Score=53.24 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=34.9
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+++||+++|.|+++-+|+.++..|.++|++|.++.++.
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE 43 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999988899999999999999999887753
No 303
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.40 E-value=0.11 Score=50.31 Aligned_cols=36 Identities=25% Similarity=0.023 Sum_probs=31.8
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
-+||+|+|.|+++.+|+.++..|+++|.+|+++.+.
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 38 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRD 38 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 468999999999999999999999999999876543
No 304
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.40 E-value=0.068 Score=49.67 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
.|+.++|+|+|.|+. |..++..|++.|. +++++...
T Consensus 18 ~L~~~~V~IvG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGLGGL-GSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECcCHH-HHHHHHHHHHcCCCEEEEECCC
Confidence 468899999999986 9999999999997 79998643
No 305
>PRK06182 short chain dehydrogenase; Validated
Probab=94.38 E-value=0.073 Score=50.20 Aligned_cols=35 Identities=29% Similarity=0.139 Sum_probs=31.7
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999998888999999999999999988765
No 306
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=94.36 E-value=0.11 Score=51.46 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=62.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hhh
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PEQ 271 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~~ 271 (368)
+|........+...+....|.+++|.|.|. +|..+++++...|+.|+++.+.... +.+
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~-vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccH-HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 444444455555555556799999999765 6999999999999987766443211 112
Q ss_pred hccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679 272 ITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 272 ~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n 306 (368)
....+|++|.++|.+..+ --+.++++..++.+|..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 223469999988865433 23567888888888864
No 307
>PRK09186 flagellin modification protein A; Provisional
Probab=94.35 E-value=0.049 Score=50.36 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=33.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~ 38 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK 38 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh
Confidence 5799999999988899999999999999998887653
No 308
>PRK06841 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.066 Score=49.60 Aligned_cols=38 Identities=26% Similarity=0.376 Sum_probs=34.3
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+++|.|+++-+|..++..|+++|++|+++.+.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~ 48 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS 48 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998889999999999999999988765
No 309
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=94.35 E-value=0.063 Score=45.12 Aligned_cols=74 Identities=22% Similarity=0.210 Sum_probs=47.5
Q ss_pred eEEEEccCccchHHHHHHHhhC-CCEEEEE-eCCC---CC-------H--------h-hhc--cCCCEEEEecCCCCc--
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRH-HATVSIV-HALT---KN-------P--------E-QIT--SEADIVIAAAGVANL-- 288 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~-gAtVti~-h~~t---~~-------L--------~-~~~--~~ADIVIsAvG~p~~-- 288 (368)
++.|+|+++.+|+-++..|... +.+++.+ .+.. +. + . +.+ .++|+||.+++....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHH
Confidence 4788998777788888888774 6665555 3221 00 0 0 112 489999999985432
Q ss_pred -cc--CCCcCCCcEEEEeecCC
Q 017679 289 -VR--GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 289 -I~--~e~ik~gavVIDvg~n~ 307 (368)
+. ...+++|.+|||++...
T Consensus 81 ~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 81 IAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred HHHHHHhhhcCCCEEEECCccc
Confidence 11 22357899999999764
No 310
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.35 E-value=0.39 Score=49.39 Aligned_cols=134 Identities=22% Similarity=0.289 Sum_probs=0.0
Q ss_pred HHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHHHHHHHHHhC--
Q 017679 150 VLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKGCIELLIRSG-- 227 (368)
Q Consensus 150 l~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~gv~~lL~~~~-- 227 (368)
+++.|..+.+- -+.|..++.+.|-.++.+.. |..|.|- |+.-.+| |=+-.|.+...++++
T Consensus 219 FiNEia~ice~-------------~g~D~~~V~~gIGlD~RIG~-~fl~aG~---GyGGsCf-PKD~~AL~~~a~~~~~~ 280 (414)
T COG1004 219 FINEIANICEK-------------VGADVKQVAEGIGLDPRIGN-HFLNAGF---GYGGSCF-PKDTKALIANAEELGYD 280 (414)
T ss_pred HHHHHHHHHHH-------------hCCCHHHHHHHcCCCchhhH-hhCCCCC---CCCCcCC-cHhHHHHHHHHHhcCCc
Q ss_pred -------------------------CCCccceEEEEc----------cCccchHHHHHHHhhCCCEEEEEeCCC------
Q 017679 228 -------------------------VEIMGKNAVVIG----------RSNIVGLPTSLLLQRHHATVSIVHALT------ 266 (368)
Q Consensus 228 -------------------------i~l~GK~VvVIG----------~g~~VGrpla~lL~~~gAtVti~h~~t------ 266 (368)
..++||+|.|.| |.-. ..+++..|+++||+|.+..-.-
T Consensus 281 ~~ll~avv~vN~~qk~~~~~~i~~~~~l~Gk~iavlgLafKpnTDD~ReSp-a~~vi~~L~~~Ga~V~aYDP~a~~~~~~ 359 (414)
T COG1004 281 PNLLEAVVEVNERRKDKLAEKILNHLGLKGKTIAVLGLAFKPNTDDMRESP-ALDIIKRLQEKGAEVIAYDPVAMENAFR 359 (414)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEEeecCCCccchhch-HHHHHHHHHHCCCEEEEECchhhHHHHh
Q ss_pred --------CCHhhhccCCCEEEEecCCCCcccCCCcC---CCcEEEE
Q 017679 267 --------KNPEQITSEADIVIAAAGVANLVRGSWLK---PGAVVLD 302 (368)
Q Consensus 267 --------~~L~~~~~~ADIVIsAvG~p~~I~~e~ik---~gavVID 302 (368)
.++++.++.||++|..+....|-..+|-+ ++.+|||
T Consensus 360 ~~~~~~~~~~~~~~~~~aDaivi~tew~ef~~~d~~~~~m~~~~v~D 406 (414)
T COG1004 360 NFPDVELESDAEEALKGADAIVINTEWDEFRDLDFEKLLMKTPVVID 406 (414)
T ss_pred cCCCceEeCCHHHHHhhCCEEEEeccHHHHhccChhhhhccCCEEEe
No 311
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.35 E-value=0.075 Score=52.12 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=31.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCC--CEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~ 265 (368)
++||+++|.|+++.+|+.++..|+++| ++|+++.+.
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~ 39 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRD 39 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Confidence 578999999999999999999999886 688887653
No 312
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.32 E-value=0.068 Score=53.60 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=31.5
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 264 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~ 264 (368)
-.|++++|+|||.|+. |.+++..|.+.|. ++++++.
T Consensus 20 ~~L~~~~VlIiG~Ggl-Gs~va~~La~aGvg~i~lvD~ 56 (338)
T PRK12475 20 RKIREKHVLIVGAGAL-GAANAEALVRAGIGKLTIADR 56 (338)
T ss_pred HhhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEcC
Confidence 3578999999999985 9999999999997 8888864
No 313
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.30 E-value=0.077 Score=48.53 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=32.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++++|+++|.|+++-+|+.++..|.++|+.|++..++
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~ 39 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR 39 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 4689999999998889999999999999988776554
No 314
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=94.28 E-value=0.12 Score=50.33 Aligned_cols=93 Identities=13% Similarity=-0.009 Sum_probs=59.7
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhh
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQ 271 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~ 271 (368)
+|.....+..|.+..---.|.+|+|.|+++.||..+++++...|++|+.+.+... ++.+
T Consensus 133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~ 212 (338)
T cd08295 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDA 212 (338)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHH
Confidence 5544555556654433347999999999777899999999999998776543211 2221
Q ss_pred hc-----cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeec
Q 017679 272 IT-----SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGT 305 (368)
Q Consensus 272 ~~-----~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~ 305 (368)
.+ ..+|+|+.++|...+- .-+.++++..++.+|.
T Consensus 213 ~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~ 252 (338)
T cd08295 213 ALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGM 252 (338)
T ss_pred HHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecc
Confidence 11 2367777777753221 2345677777777774
No 315
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=94.28 E-value=0.074 Score=53.33 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=48.8
Q ss_pred hHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhccCCCEEEEecCCCCcc----c--CCCcCCCcE
Q 017679 245 GLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVANLV----R--GSWLKPGAV 299 (368)
Q Consensus 245 Grpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p~~I----~--~e~ik~gav 299 (368)
|.++|..|++.|.+|++.+++. .+..+.++++|+||+.++.+.-+ . .+.+++|++
T Consensus 32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLaa~L~~GaI 111 (341)
T TIGR01724 32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTIIEHVPENAV 111 (341)
T ss_pred HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHHhcCCCCCE
Confidence 7888888888888888886531 24568889999999999876532 2 245788999
Q ss_pred EEEeecCC
Q 017679 300 VLDVGTCP 307 (368)
Q Consensus 300 VIDvg~n~ 307 (368)
|||.++..
T Consensus 112 VID~STIs 119 (341)
T TIGR01724 112 ICNTCTVS 119 (341)
T ss_pred EEECCCCC
Confidence 99998764
No 316
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.28 E-value=0.068 Score=49.21 Aligned_cols=38 Identities=24% Similarity=0.203 Sum_probs=34.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~ 40 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ 40 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh
Confidence 47899999999999999999999999999999988765
No 317
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.061 Score=50.22 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|.++-+|+.++..|+++|++|.++.++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~ 40 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARD 40 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCC
Confidence 4789999999998888999999999999999998765
No 318
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.24 E-value=0.073 Score=49.26 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=30.9
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+|+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~ 35 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQI 35 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6789999999999999999999999999887764
No 319
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.24 E-value=0.11 Score=51.84 Aligned_cols=73 Identities=21% Similarity=0.158 Sum_probs=53.1
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC----------------------------------CCCHhhhccCCCE
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL----------------------------------TKNPEQITSEADI 278 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~----------------------------------t~~L~~~~~~ADI 278 (368)
++|.|||+|-+ |..+|..++..|..|++.... +.++++.+.+||+
T Consensus 8 ~~VaVIGaG~M-G~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 8 KTFAAIGSGVI-GSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 68999998865 999999999999999998653 1356677899999
Q ss_pred EEEecCCCCcccC-------CCcCCCcEEEEeecCC
Q 017679 279 VIAAAGVANLVRG-------SWLKPGAVVLDVGTCP 307 (368)
Q Consensus 279 VIsAvG~p~~I~~-------e~ik~gavVIDvg~n~ 307 (368)
||-++.-.--++. +..++++ ||+..++.
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~a-IlaSnTS~ 121 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPDA-IIASSTSG 121 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCCe-EEEECCCc
Confidence 9998863221222 2346666 66655443
No 320
>PRK08264 short chain dehydrogenase; Validated
Probab=94.24 E-value=0.063 Score=49.18 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t 266 (368)
++.+|+++|+|+++-+|+.++..|+++|+ +|+++.+..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~ 41 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP 41 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh
Confidence 36789999999988899999999999999 999998754
No 321
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.22 E-value=0.052 Score=50.98 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=35.0
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+++||+++|.|+++-+|+.++..|+++|++|.+..+..
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~ 44 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ 44 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 467999999999999999999999999999998887654
No 322
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.21 E-value=0.093 Score=48.29 Aligned_cols=35 Identities=31% Similarity=0.382 Sum_probs=31.7
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
||+++|.|+++.+|+.++..|+++|++|+++.|..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~ 35 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE 35 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999997753
No 323
>PRK07774 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.063 Score=49.48 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|.+..|..
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~ 40 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA 40 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988889999999999999999998753
No 324
>PRK09242 tropinone reductase; Provisional
Probab=94.20 E-value=0.044 Score=51.01 Aligned_cols=39 Identities=26% Similarity=0.252 Sum_probs=34.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
..++||+++|+|+++-+|+.++..|.++|++|+++.++.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~ 43 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDA 43 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 357899999999988889999999999999999887653
No 325
>PRK07478 short chain dehydrogenase; Provisional
Probab=94.18 E-value=0.051 Score=50.52 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=33.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|.++|++|.++.+..
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~ 40 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ 40 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999988889999999999999999887653
No 326
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.18 E-value=0.1 Score=48.69 Aligned_cols=36 Identities=25% Similarity=0.252 Sum_probs=32.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+++||.++|.|.++-+|+.++..|+++|++|..+++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~ 42 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI 42 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC
Confidence 578999999999988999999999999999887654
No 327
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.17 E-value=0.056 Score=50.10 Aligned_cols=38 Identities=34% Similarity=0.412 Sum_probs=33.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++.+|+.++..|+++|++|.++.+..
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~ 41 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQ 41 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCh
Confidence 36799999999999999999999999999998886643
No 328
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.17 E-value=0.072 Score=50.93 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEe
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVH 263 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h 263 (368)
.|+.++|+|||.|++ |.+++..|+..|. ++++++
T Consensus 29 ~L~~~~VliiG~Ggl-Gs~va~~La~~Gvg~i~lvD 63 (245)
T PRK05690 29 KLKAARVLVVGLGGL-GCAASQYLAAAGVGTLTLVD 63 (245)
T ss_pred HhcCCeEEEECCCHH-HHHHHHHHHHcCCCEEEEEc
Confidence 478899999999986 9999999999996 788885
No 329
>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional
Probab=94.17 E-value=0.071 Score=58.22 Aligned_cols=73 Identities=27% Similarity=0.327 Sum_probs=55.4
Q ss_pred ceEEEEccCccchHHHHHHHhhCC--CEEEEEeCCC----------------CCHhhhccCCCEEEEecCCCCc---cc-
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT----------------KNPEQITSEADIVIAAAGVANL---VR- 290 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t----------------~~L~~~~~~ADIVIsAvG~p~~---I~- 290 (368)
++|.|||.|.+ |..++..|.+.| ..|++++++. .++.+.+.++|+||.+++...+ +.
T Consensus 4 ~~I~IIG~G~m-G~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~ 82 (735)
T PRK14806 4 GRVVVIGLGLI-GGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLAMEKVLAD 82 (735)
T ss_pred cEEEEEeeCHH-HHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 68999999886 999999999988 4788887653 2355567899999999984321 21
Q ss_pred -CCCcCCCcEEEEeecC
Q 017679 291 -GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 291 -~e~ik~gavVIDvg~n 306 (368)
.+.++++.+|+|++..
T Consensus 83 l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 83 LKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHhcCCCcEEEEcCCC
Confidence 1346788999999864
No 330
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=94.17 E-value=0.22 Score=50.15 Aligned_cols=78 Identities=21% Similarity=0.275 Sum_probs=54.9
Q ss_pred cccCCHHHHHHHHHHhC------CCCccceEEEEccCccchHHHHHHHhhCC-CEEEEEeCC------------------
Q 017679 211 FIPCTPKGCIELLIRSG------VEIMGKNAVVIGRSNIVGLPTSLLLQRHH-ATVSIVHAL------------------ 265 (368)
Q Consensus 211 ~~PcTa~gv~~lL~~~~------i~l~GK~VvVIG~g~~VGrpla~lL~~~g-AtVti~h~~------------------ 265 (368)
-+|+++.-.++.|-+.. -.-+|+.|+|+|+|+.||..+.+++...| +.|+.+.+.
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~ 210 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYK 210 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCC
Confidence 34666655666665555 45679999999999999999999999999 555555433
Q ss_pred CCCHhhhccC-----CCEEEEecCCCCc
Q 017679 266 TKNPEQITSE-----ADIVIAAAGVANL 288 (368)
Q Consensus 266 t~~L~~~~~~-----ADIVIsAvG~p~~ 288 (368)
+.+..+.+++ .|+|+-++|.+.+
T Consensus 211 ~~~~~e~~kk~~~~~~DvVlD~vg~~~~ 238 (347)
T KOG1198|consen 211 DENVVELIKKYTGKGVDVVLDCVGGSTL 238 (347)
T ss_pred CHHHHHHHHhhcCCCccEEEECCCCCcc
Confidence 1234455554 7888888887543
No 331
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.049 Score=50.48 Aligned_cols=38 Identities=29% Similarity=0.345 Sum_probs=34.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++++|+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~ 42 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL 42 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 57899999999999999999999999999999887753
No 332
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.15 E-value=0.057 Score=49.49 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=33.0
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++|+++|.|+++.+|+.++..|+++|++|+++.|+
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 578999999999999999999999999999988765
No 333
>PRK07060 short chain dehydrogenase; Provisional
Probab=94.14 E-value=0.064 Score=49.16 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=34.6
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+++||+++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~ 43 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA 43 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 357899999999988889999999999999999887753
No 334
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=94.14 E-value=0.14 Score=51.47 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHHhCCC-CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---------------------Hh
Q 017679 213 PCTPKGCIELLIRSGVE-IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---------------------PE 270 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~-l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---------------------L~ 270 (368)
+|....+...+...+.. -.|+.|+|.|.|. +|..+++++...|++|+++.+.... +.
T Consensus 159 ~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~-vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~ 237 (375)
T PLN02178 159 LCAGITVYSPMKYYGMTKESGKRLGVNGLGG-LGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMK 237 (375)
T ss_pred hccchHHHHHHHHhCCCCCCCCEEEEEcccH-HHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHH
Confidence 45444455555555443 3699999999865 6999999999999988776543211 11
Q ss_pred hhccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecC
Q 017679 271 QITSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 271 ~~~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n 306 (368)
+.+..+|+||.++|.+..+ --+.+++|..++.+|..
T Consensus 238 ~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 238 EAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccC
Confidence 1223479999988876432 23467888888888864
No 335
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.13 E-value=0.064 Score=50.27 Aligned_cols=37 Identities=16% Similarity=0.251 Sum_probs=33.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
.+++||+++|.|++.-+|+.++..|+++|++|+++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~ 40 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN 40 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC
Confidence 3578999999999988999999999999999988864
No 336
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.13 E-value=0.088 Score=51.22 Aligned_cols=51 Identities=14% Similarity=0.077 Sum_probs=41.2
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG 284 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG 284 (368)
+|+|.|++|.+|+.++..|.++|.+|+++.|+.. ++.+.++.+|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence 7999999999999999999999999998876521 24456777888887665
No 337
>PRK06196 oxidoreductase; Provisional
Probab=94.13 E-value=0.054 Score=52.61 Aligned_cols=39 Identities=31% Similarity=0.381 Sum_probs=35.4
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
..+++||+++|.|+++-+|+.++..|+++|++|+++.|+
T Consensus 21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 567899999999998888999999999999999998775
No 338
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.12 E-value=0.081 Score=48.85 Aligned_cols=52 Identities=13% Similarity=0.050 Sum_probs=43.0
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------------CCHhhhccCCCEEEEecCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------------KNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------------~~L~~~~~~ADIVIsAvG~p 286 (368)
|+|+|+.|.+|++++..|++.+.+|+++.|.. +.|.+.++.+|.||..++..
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~ 75 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPS 75 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcc
Confidence 68999988899999999999999999998864 13556788889998888743
No 339
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.09 E-value=0.11 Score=48.33 Aligned_cols=54 Identities=19% Similarity=0.137 Sum_probs=44.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhhccCCCEEEEecCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~~~~ADIVIsAvG~p 286 (368)
+|+.|||+||-+|.-++.-+.++|.+||-+-|+.. .+.+.+..-|+||+|.|.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 47999999999999999999999999998876531 2335677889999999854
No 340
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.09 E-value=0.049 Score=53.14 Aligned_cols=38 Identities=32% Similarity=0.295 Sum_probs=34.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+++|.|++.-+|+.++..|+++|++|+++.|+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999998775
No 341
>PRK07825 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.053 Score=51.07 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=33.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~ 39 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE 39 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 46799999999999899999999999999999887653
No 342
>PRK12743 oxidoreductase; Provisional
Probab=94.07 E-value=0.11 Score=48.39 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=31.2
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+|+++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~ 35 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHS 35 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999999999999999999999888543
No 343
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=94.06 E-value=0.072 Score=47.67 Aligned_cols=37 Identities=24% Similarity=0.406 Sum_probs=31.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+|+|||.|.. |.-++..|++.|.+|++++|+.
T Consensus 164 ~~~~k~V~VVG~G~S-A~d~a~~l~~~g~~V~~~~R~~ 200 (203)
T PF13738_consen 164 DFKGKRVVVVGGGNS-AVDIAYALAKAGKSVTLVTRSP 200 (203)
T ss_dssp GCTTSEEEEE--SHH-HHHHHHHHTTTCSEEEEEESS-
T ss_pred hcCCCcEEEEcChHH-HHHHHHHHHhhCCEEEEEecCC
Confidence 578999999999988 9999999999999999999864
No 344
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.1 Score=48.89 Aligned_cols=35 Identities=29% Similarity=0.131 Sum_probs=31.8
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999999999999999999988775
No 345
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=94.06 E-value=0.11 Score=53.56 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=54.7
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------------------CHhhhccCCCEEEEec
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------------------NPEQITSEADIVIAAA 283 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------------------~L~~~~~~ADIVIsAv 283 (368)
.+|.|||-|. ||.|+|..|++ +.+|+.++.+.. .-.+.+++||++|.++
T Consensus 7 mkI~vIGlGy-vGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGY-VGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCc-chHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 5799999987 59999999876 689999976521 0123578999999999
Q ss_pred CCCC---------ccc------CCCcCCCcEEEEeecCCC
Q 017679 284 GVAN---------LVR------GSWLKPGAVVLDVGTCPV 308 (368)
Q Consensus 284 G~p~---------~I~------~e~ik~gavVIDvg~n~~ 308 (368)
+.|. .+- ...+++|.+|||-.+-+.
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~p 124 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTVYP 124 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 9772 121 134678999999887653
No 346
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=94.05 E-value=0.054 Score=50.70 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=33.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERS 39 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999998888999999999999999988775
No 347
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.051 Score=51.86 Aligned_cols=37 Identities=27% Similarity=0.344 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVD 39 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3789999999999889999999999999999988765
No 348
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=94.03 E-value=0.12 Score=54.02 Aligned_cols=52 Identities=25% Similarity=0.197 Sum_probs=43.4
Q ss_pred cCCHHHHHH----HHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEE-EEeCC
Q 017679 213 PCTPKGCIE----LLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVS-IVHAL 265 (368)
Q Consensus 213 PcTa~gv~~----lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVt-i~h~~ 265 (368)
+.|.+|++. +|++.+.+++||+|+|=|.|+ ||..++..|.+.||+|+ ++.++
T Consensus 214 eATG~Gv~~~~~~~l~~~~~~l~Gk~VaVqG~Gn-Vg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 214 EATGYGLVYFVLEVLKKLNDSLEGKTVVVSGSGN-VAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred cccHHHHHHHHHHHHHHcCCCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEEcCC
Confidence 568888654 456778899999999999887 59999999999999877 77665
No 349
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=94.03 E-value=0.11 Score=54.55 Aligned_cols=53 Identities=15% Similarity=0.086 Sum_probs=43.7
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC----------------------------------CCHhhhccCCCE
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT----------------------------------KNPEQITSEADI 278 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t----------------------------------~~L~~~~~~ADI 278 (368)
++|.|||.|.+ |.++|..|++.|..|++++++. .++.+.+++||+
T Consensus 5 ~kIavIG~G~M-G~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGGGVI-GGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 57999999876 9999999999999999987542 245567899999
Q ss_pred EEEecCCC
Q 017679 279 VIAAAGVA 286 (368)
Q Consensus 279 VIsAvG~p 286 (368)
||.++...
T Consensus 84 Vieavpe~ 91 (495)
T PRK07531 84 IQESVPER 91 (495)
T ss_pred EEEcCcCC
Confidence 99988744
No 350
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.02 E-value=0.1 Score=53.73 Aligned_cols=35 Identities=29% Similarity=0.253 Sum_probs=32.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+|.|+|.|+. |+++|.+|.++|++|+++...
T Consensus 7 ~~~~~i~viG~G~~-G~~~a~~l~~~G~~v~~~D~~ 41 (460)
T PRK01390 7 FAGKTVAVFGLGGS-GLATARALVAGGAEVIAWDDN 41 (460)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEECCC
Confidence 67999999999998 999999999999999999865
No 351
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.02 E-value=0.13 Score=49.39 Aligned_cols=35 Identities=26% Similarity=0.116 Sum_probs=30.8
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+||+|+|.|+++.+|+.++..|+++|.+|+++.+.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 47899999998889999999999999998876543
No 352
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=94.01 E-value=0.08 Score=53.28 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=51.8
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCC---EEEEEeCCC---------------CCHh-hhccCCCEEEEecCCCCc--c
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHA---TVSIVHALT---------------KNPE-QITSEADIVIAAAGVANL--V 289 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gA---tVti~h~~t---------------~~L~-~~~~~ADIVIsAvG~p~~--I 289 (368)
...+|.|+|++|.+|+-+..+|.+++. ++..+.+.. .++. +.+.++|+||.|+|.-.. +
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~ 85 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKF 85 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHH
Confidence 457899999999999999999998653 443333221 0111 345789999999974311 2
Q ss_pred cCCCcCCCcEEEEeecCC
Q 017679 290 RGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 290 ~~e~ik~gavVIDvg~n~ 307 (368)
-++..+.|+.|||.+-..
T Consensus 86 ~~~~~~~g~~VIDlS~~f 103 (344)
T PLN02383 86 GPIAVDKGAVVVDNSSAF 103 (344)
T ss_pred HHHHHhCCCEEEECCchh
Confidence 222346799999998654
No 353
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=94.01 E-value=0.14 Score=50.62 Aligned_cols=39 Identities=15% Similarity=0.078 Sum_probs=34.2
Q ss_pred hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
...-+++|+|+|.|++|.+|..++..|+++|.+|+.+.+
T Consensus 9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~ 47 (348)
T PRK15181 9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN 47 (348)
T ss_pred hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 345678899999999999999999999999999988754
No 354
>PLN02427 UDP-apiose/xylose synthase
Probab=94.00 E-value=0.11 Score=51.84 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=45.5
Q ss_pred hCCCCccceEEEEccCccchHHHHHHHhhC-CCEEEEEeCCCC----------------------------CHhhhccCC
Q 017679 226 SGVEIMGKNAVVIGRSNIVGLPTSLLLQRH-HATVSIVHALTK----------------------------NPEQITSEA 276 (368)
Q Consensus 226 ~~i~l~GK~VvVIG~g~~VGrpla~lL~~~-gAtVti~h~~t~----------------------------~L~~~~~~A 276 (368)
.|..++.++|+|.|++|.+|+.++..|+++ |..|..+.+... .+.+.++.+
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 87 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMA 87 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcC
Confidence 355677889999999999999999999988 588887764321 134556789
Q ss_pred CEEEEecC
Q 017679 277 DIVIAAAG 284 (368)
Q Consensus 277 DIVIsAvG 284 (368)
|+||..++
T Consensus 88 d~ViHlAa 95 (386)
T PLN02427 88 DLTINLAA 95 (386)
T ss_pred CEEEEccc
Confidence 99997765
No 355
>PRK08589 short chain dehydrogenase; Validated
Probab=94.00 E-value=0.061 Score=50.93 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~ 39 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA 39 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999998888999999999999999998765
No 356
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.00 E-value=0.13 Score=53.78 Aligned_cols=126 Identities=21% Similarity=0.297 Sum_probs=69.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHhhhccCC--CEEEEecC--CCCcccCCCcCCCcEEEEee
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPEQITSEA--DIVIAAAG--VANLVRGSWLKPGAVVLDVG 304 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~~~~~~A--DIVIsAvG--~p~~I~~e~ik~gavVIDvg 304 (368)
+.+|+|.|+|-|+. |+++|.+|.++|+.|+.++.... ...+.++.. .+-+.. | .+..++ ....+|+.-|
T Consensus 5 ~~~~~i~v~G~G~s-G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~-g~~~~~~~~----~~d~vv~sp~ 78 (498)
T PRK02006 5 LQGPMVLVLGLGES-GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVG-GPFDPALLD----GVDLVALSPG 78 (498)
T ss_pred cCCCEEEEEeecHh-HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEe-CCCchhHhc----CCCEEEECCC
Confidence 57899999999998 99999999999999999986532 111223222 111111 1 111121 1245666656
Q ss_pred cCCCCCCCCC----CCCCCcEEEcccchh-hhhcc------ceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 305 TCPVDVSVDP----SCEYGYRLMGDVCYE-EAMRL------ASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 305 ~n~~~~~~d~----t~~~~~kl~GDVd~~-~~~~~------a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
+++...+.-+ -...+-++.+++++- ...+. ...+--|-|=-|.-|+..|+.++++.+
T Consensus 79 I~~~~~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGKTTTt~ml~~iL~~~ 146 (498)
T PRK02006 79 LSPLEAALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGKTTTTALTGLLCERA 146 (498)
T ss_pred CCCcccccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcHHHHHHHHHHHHHHc
Confidence 5542000000 001133567777642 11110 001113457788999999999998764
No 357
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=93.99 E-value=0.14 Score=50.48 Aligned_cols=53 Identities=28% Similarity=0.449 Sum_probs=41.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~ 285 (368)
++|.|||+|. ||..+|..|+.+|. +|+++.... .++++ +++||+||.++|.
T Consensus 2 ~KV~VIGaG~-vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGF-VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCH-HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 4799999876 69999999998874 788886531 23433 7999999999996
Q ss_pred CC
Q 017679 286 AN 287 (368)
Q Consensus 286 p~ 287 (368)
|.
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 53
No 358
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.98 E-value=0.07 Score=49.89 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|+|+++-+|+.++..|.++|+.|.++.+.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~ 40 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRS 40 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999999999999999999999998887664
No 359
>PRK06194 hypothetical protein; Provisional
Probab=93.98 E-value=0.062 Score=50.85 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~ 39 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQ 39 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999998888999999999999999988765
No 360
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=93.97 E-value=0.077 Score=45.53 Aligned_cols=34 Identities=21% Similarity=0.346 Sum_probs=28.7
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
+.++|+|+|.|++ |..++..|.+.|. .++++...
T Consensus 1 r~~~v~iiG~G~v-Gs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 1 RNKRVLIIGAGGV-GSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp HT-EEEEESTSHH-HHHHHHHHHHHTTSEEEEEESS
T ss_pred CCCEEEEECcCHH-HHHHHHHHHHhCCCceeecCCc
Confidence 3589999999986 9999999999997 89999643
No 361
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=93.97 E-value=0.056 Score=51.03 Aligned_cols=38 Identities=29% Similarity=0.378 Sum_probs=34.2
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||.++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~ 43 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRN 43 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 35789999999998888999999999999999998775
No 362
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=93.95 E-value=0.15 Score=49.56 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=53.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCCCHh-----------h-hccCCCEEEEecCCCCccc--CCCc
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTKNPE-----------Q-ITSEADIVIAAAGVANLVR--GSWL 294 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~~L~-----------~-~~~~ADIVIsAvG~p~~I~--~e~i 294 (368)
..|++|+|+|.|. ||..+++++...|++ |.++.+....++ + .-..+|+||-++|.+..+. -+.+
T Consensus 143 ~~~~~vlV~G~G~-vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l 221 (308)
T TIGR01202 143 VKVLPDLIVGHGT-LGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRL 221 (308)
T ss_pred cCCCcEEEECCCH-HHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhccccChhhccCCCCCEEEECCCCHHHHHHHHHhh
Confidence 4688999999876 599999988889997 444533221111 0 1134799999999876543 3678
Q ss_pred CCCcEEEEeecC
Q 017679 295 KPGAVVLDVGTC 306 (368)
Q Consensus 295 k~gavVIDvg~n 306 (368)
+++..++-+|..
T Consensus 222 ~~~G~iv~~G~~ 233 (308)
T TIGR01202 222 AKGGEIVLAGFY 233 (308)
T ss_pred hcCcEEEEEeec
Confidence 888888888864
No 363
>PRK06223 malate dehydrogenase; Reviewed
Probab=93.94 E-value=0.15 Score=49.73 Aligned_cols=53 Identities=26% Similarity=0.404 Sum_probs=41.5
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~ 285 (368)
+||.|||+|. ||..++..|+..|. +|.+++... .+. +.+++||+||.++|.
T Consensus 3 ~KI~VIGaG~-vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~~ 80 (307)
T PRK06223 3 KKISIIGAGN-VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAGV 80 (307)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCCC
Confidence 5899999965 59999999998764 888887531 233 457999999999987
Q ss_pred CC
Q 017679 286 AN 287 (368)
Q Consensus 286 p~ 287 (368)
|.
T Consensus 81 p~ 82 (307)
T PRK06223 81 PR 82 (307)
T ss_pred CC
Confidence 64
No 364
>PRK07856 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.094 Score=48.76 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999989999999999999999888764
No 365
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.92 E-value=0.13 Score=50.69 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=41.2
Q ss_pred eEEEEccCccchHHHHHHHhhCC--CEEEEEeCCCC-------CH----------------hhhccCCCEEEEecCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALTK-------NP----------------EQITSEADIVIAAAGVA 286 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t~-------~L----------------~~~~~~ADIVIsAvG~p 286 (368)
+|.|||.|. ||.+++..|+.+| ..|.++.+... ++ .+.+++||+||.++|.|
T Consensus 2 kI~IIGaG~-VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 2 KVAIVGAGF-VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred EEEEECCCH-HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 699999976 6999999999999 47888876531 01 24578999999999975
No 366
>PRK07576 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.07 Score=50.30 Aligned_cols=37 Identities=27% Similarity=0.413 Sum_probs=33.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~ 42 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRS 42 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999999998889999999999999999998765
No 367
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=93.91 E-value=0.14 Score=49.73 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=51.1
Q ss_pred cceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------CCHhhhc-----cCCCEEEEecCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------KNPEQIT-----SEADIVIAAAGV 285 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------~~L~~~~-----~~ADIVIsAvG~ 285 (368)
|.+|+|.|+++.||..+++++...|+ .|+.+.+.. .++.+.+ +..|+|+.++|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 48999999977789999999999998 787764431 1222211 247888888886
Q ss_pred CCcc-cCCCcCCCcEEEEeec
Q 017679 286 ANLV-RGSWLKPGAVVLDVGT 305 (368)
Q Consensus 286 p~~I-~~e~ik~gavVIDvg~ 305 (368)
+.+- .-+.++++..++.+|.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 5431 2345778878888874
No 368
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=93.91 E-value=0.18 Score=46.27 Aligned_cols=94 Identities=28% Similarity=0.362 Sum_probs=63.7
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------CHhhh-
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-------------------NPEQI- 272 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-------------------~L~~~- 272 (368)
|+....++..+.....-..|++++|.|.|. +|..++.++...|++|+.+.+... +..+.
T Consensus 116 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 194 (271)
T cd05188 116 PEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEEL 194 (271)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHH
Confidence 444444555555555446799999999999 899999999999999887765421 11111
Q ss_pred ----ccCCCEEEEecCCCCcc--cCCCcCCCcEEEEeecCC
Q 017679 273 ----TSEADIVIAAAGVANLV--RGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 273 ----~~~ADIVIsAvG~p~~I--~~e~ik~gavVIDvg~n~ 307 (368)
-...|++|.++|.+..+ ..+.++++..++++|...
T Consensus 195 ~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~ 235 (271)
T cd05188 195 RLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTS 235 (271)
T ss_pred HHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCC
Confidence 24579999888863322 234667777888888653
No 369
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=93.90 E-value=0.062 Score=50.04 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=33.4
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++|+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~ 40 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP 40 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH
Confidence 6789999999988899999999999999999887653
No 370
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.89 E-value=0.13 Score=50.07 Aligned_cols=72 Identities=17% Similarity=0.209 Sum_probs=52.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------------------------------CCHhhhcc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------------------------------KNPEQITS 274 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------------------------------~~L~~~~~ 274 (368)
++|.|||+|.. |.++|..|+..|..|+++++.. .++ +.++
T Consensus 6 ~~V~ViGaG~m-G~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~ 83 (286)
T PRK07819 6 QRVGVVGAGQM-GAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFA 83 (286)
T ss_pred cEEEEEcccHH-HHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhC
Confidence 48999999875 9999999999999999997542 133 4478
Q ss_pred CCCEEEEecCCCCcccC-------CCc-CCCcEEEEeecC
Q 017679 275 EADIVIAAAGVANLVRG-------SWL-KPGAVVLDVGTC 306 (368)
Q Consensus 275 ~ADIVIsAvG~p~~I~~-------e~i-k~gavVIDvg~n 306 (368)
+||+||-++.--.-++. .+. ++++++..-.+.
T Consensus 84 ~~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS~ 123 (286)
T PRK07819 84 DRQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTSS 123 (286)
T ss_pred CCCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 99999999863221222 345 678888665443
No 371
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=93.88 E-value=0.067 Score=53.75 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=53.9
Q ss_pred ccceEEEEccCccchHHHHHHHhhC---CCEEEEEeCCC---------------CCHhhhc-cCCCEEEEecCCCC--cc
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRH---HATVSIVHALT---------------KNPEQIT-SEADIVIAAAGVAN--LV 289 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~---gAtVti~h~~t---------------~~L~~~~-~~ADIVIsAvG~p~--~I 289 (368)
++.+|.|||++|.||+-+..+|.++ ..++..+.+.. .++.+.. .++|+++.|+|..- -+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~~~s~~~ 82 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGREASAAY 82 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCHHHHHHH
Confidence 4678999999999999999999984 35666665542 1222222 67899999996421 13
Q ss_pred cCCCcCCCcEEEEeecCC
Q 017679 290 RGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 290 ~~e~ik~gavVIDvg~n~ 307 (368)
-++..+.|+.|||.+-..
T Consensus 83 ~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 83 AEEATNAGCLVIDSSGLF 100 (336)
T ss_pred HHHHHHCCCEEEECChHh
Confidence 333456799999998654
No 372
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=93.88 E-value=0.081 Score=48.79 Aligned_cols=37 Identities=32% Similarity=0.422 Sum_probs=33.3
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++||+++|.|.++.+|+.++..|+++|++|.++.|+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~ 38 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLND 38 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999999999999999999999999887753
No 373
>PRK05225 ketol-acid reductoisomerase; Validated
Probab=93.86 E-value=0.056 Score=56.48 Aligned_cols=78 Identities=23% Similarity=0.247 Sum_probs=55.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhhccCCCEEEEecCCCC--
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQITSEADIVIAAAGVAN-- 287 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~~~~ADIVIsAvG~p~-- 287 (368)
.|+||+|+|||.|.. |+.-|..|...|.+|++.-|.. .++.+.+++||+|+..++--.
T Consensus 33 ~LkgKtIaIIGyGSq-G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~ 111 (487)
T PRK05225 33 YLKGKKIVIVGCGAQ-GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 111 (487)
T ss_pred HhCCCEEEEEccCHH-HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHH
Confidence 368999999999986 9988888888899888554431 257788999999999987321
Q ss_pred cccC---CCcCCCcE-EEEeecCC
Q 017679 288 LVRG---SWLKPGAV-VLDVGTCP 307 (368)
Q Consensus 288 ~I~~---e~ik~gav-VIDvg~n~ 307 (368)
.|-. ..+|+|++ .+-=|+|-
T Consensus 112 ~v~~~i~p~LK~Ga~L~fsHGFni 135 (487)
T PRK05225 112 DVVRAVQPLMKQGAALGYSHGFNI 135 (487)
T ss_pred HHHHHHHhhCCCCCEEEecCCcee
Confidence 2222 35677753 33444443
No 374
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.84 E-value=0.14 Score=52.42 Aligned_cols=124 Identities=18% Similarity=0.211 Sum_probs=68.9
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC-HhhhccC--CCEEEEecCCCCcccCCCc-CCCcEEEEeec
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN-PEQITSE--ADIVIAAAGVANLVRGSWL-KPGAVVLDVGT 305 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~-L~~~~~~--ADIVIsAvG~p~~I~~e~i-k~gavVIDvg~ 305 (368)
+.||+++|+|.|+. |+.+|.+|.++|++|++.+..... ..+.++. .-+.+. .|.. ..+.+ ..+.+|+--|+
T Consensus 3 ~~~~~~~v~G~g~~-G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~-~g~~---~~~~~~~~d~vv~spgi 77 (445)
T PRK04308 3 FQNKKILVAGLGGT-GISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFY-TGRL---KDALDNGFDILALSPGI 77 (445)
T ss_pred CCCCEEEEECCCHH-HHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEE-eCCC---CHHHHhCCCEEEECCCC
Confidence 57899999999987 999999999999999998754321 1111221 011111 1110 00001 12445555555
Q ss_pred CCCCCCCCCCCCCCcEEEcccchh-hhhc----cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 306 CPVDVSVDPSCEYGYRLMGDVCYE-EAMR----LASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 306 n~~~~~~d~t~~~~~kl~GDVd~~-~~~~----~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
++.....-.-.+.+-++.++.++- ...+ ..- -|-|=-|.-|+..|+.++++.+
T Consensus 78 ~~~~p~~~~a~~~~i~v~~~~~~~~~~~~~~~~~~I---~ITGT~GKTTTt~li~~iL~~~ 135 (445)
T PRK04308 78 SERQPDIEAFKQNGGRVLGDIELLADIVNRRGDKVI---AITGSNGKTTVTSLVGYLCIKC 135 (445)
T ss_pred CCCCHHHHHHHHcCCcEEEhHHHHHHhhhcCCCCEE---EEECCCcHHHHHHHHHHHHHHc
Confidence 543100000001234577777762 2111 223 3457788999999999988764
No 375
>PRK06500 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.064 Score=49.32 Aligned_cols=36 Identities=28% Similarity=0.361 Sum_probs=32.6
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|+++-+|+.++..|+++|++|++..++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~ 39 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRD 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 579999999999999999999999999999887654
No 376
>PRK07814 short chain dehydrogenase; Provisional
Probab=93.82 E-value=0.062 Score=50.46 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.++.
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~ 44 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE 44 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 47899999999999899999999999999998887653
No 377
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=93.82 E-value=0.085 Score=49.35 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||.++|.|++.-+|+.++..|+++|++|.++.+.
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~ 41 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVA 41 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCc
Confidence 5789999999999999999999999999999887653
No 378
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.81 E-value=0.079 Score=48.45 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=34.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|..++..|.++|++|++..++.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~ 39 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE 39 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36899999999999999999999999999999887754
No 379
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=93.76 E-value=0.095 Score=49.52 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=42.1
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC------HhhhccCC--CEEEEecCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN------PEQITSEA--DIVIAAAGV 285 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~------L~~~~~~A--DIVIsAvG~ 285 (368)
+|+|+|+++.+|+.++..|+++|.+|+++.+...| +.+.+..+ |+||..+|.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 58999998899999999999999999998876432 44556655 999988774
No 380
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.76 E-value=0.099 Score=47.52 Aligned_cols=38 Identities=32% Similarity=0.368 Sum_probs=33.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++.+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~ 39 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE 39 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35689999999999999999999999999999888764
No 381
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.69 E-value=0.11 Score=51.06 Aligned_cols=59 Identities=20% Similarity=0.111 Sum_probs=45.3
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------CHhhhccCCCEEE
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------NPEQITSEADIVI 280 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------~L~~~~~~ADIVI 280 (368)
+-+-++++|+|.|+++.+|+.++..|+++|++|+++.+... .+.+.++..|+||
T Consensus 5 ~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi 84 (353)
T PLN02896 5 GRESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVF 84 (353)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence 34567899999999999999999999999999988754321 1234456789999
Q ss_pred EecCC
Q 017679 281 AAAGV 285 (368)
Q Consensus 281 sAvG~ 285 (368)
..++.
T Consensus 85 h~A~~ 89 (353)
T PLN02896 85 HVAAS 89 (353)
T ss_pred ECCcc
Confidence 77764
No 382
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=93.68 E-value=0.13 Score=50.58 Aligned_cols=77 Identities=27% Similarity=0.359 Sum_probs=55.0
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC---C------------------CCHh--hhccCCCEEEEecCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL---T------------------KNPE--QITSEADIVIAAAGVA 286 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~---t------------------~~L~--~~~~~ADIVIsAvG~p 286 (368)
..|++|+|+|.|. ||..+++++...|++|+++.+. . .++. .....+|+||.++|.+
T Consensus 171 ~~g~~vlI~G~G~-vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 249 (355)
T cd08230 171 WNPRRALVLGAGP-IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVP 249 (355)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCH
Confidence 4799999999865 6999999999999998887652 1 0111 1123479999999987
Q ss_pred Cccc--CCCcCCCcEEEEeecCC
Q 017679 287 NLVR--GSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 287 ~~I~--~e~ik~gavVIDvg~n~ 307 (368)
..+. -+.++++..++-+|...
T Consensus 250 ~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 250 PLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHccCCcEEEEEecCC
Confidence 5432 35678877777777643
No 383
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.64 E-value=0.18 Score=49.14 Aligned_cols=36 Identities=22% Similarity=0.146 Sum_probs=31.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+.++|+|+|.|+++-+|+.++..|+++|++|.++.+
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r 41 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR 41 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 567999999999999999999999999999876643
No 384
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=93.64 E-value=0.086 Score=51.15 Aligned_cols=40 Identities=33% Similarity=0.373 Sum_probs=36.2
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK 267 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~ 267 (368)
..++||.++|-|++.-+|+++|.+|++.||+|+++.|+..
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~ 43 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE 43 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4589999999999888899999999999999999988753
No 385
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=93.64 E-value=0.088 Score=52.45 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=51.3
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-C---CHhhhccCCCEEEEecCCCC--cccCCCcCCCcEEEEeec
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-K---NPEQITSEADIVIAAAGVAN--LVRGSWLKPGAVVLDVGT 305 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-~---~L~~~~~~ADIVIsAvG~p~--~I~~e~ik~gavVIDvg~ 305 (368)
-+|.|||+++.+|.-+..+|.++.- ++.-..+.. . +.++...++|+||.|++.-. -+-+...+.|..|||.+.
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~~~~~~~~~~~~DvvFlalp~~~s~~~~~~~~~~g~~VIDlSa 82 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKDAAARRELLNAADVAILCLPDDAAREAVALIDNPATRVIDAST 82 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCcccCchhhhcCCCEEEECCCHHHHHHHHHHHHhCCCEEEECCh
Confidence 3799999999999999999998863 433332321 1 22334478999999985311 122233467899999997
Q ss_pred CCC
Q 017679 306 CPV 308 (368)
Q Consensus 306 n~~ 308 (368)
...
T Consensus 83 dfR 85 (313)
T PRK11863 83 AHR 85 (313)
T ss_pred hhh
Confidence 653
No 386
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.63 E-value=0.089 Score=48.32 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=34.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++++|+++|.|+++-+|+.++..|+++|++|.+++|+.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~ 41 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE 41 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999998764
No 387
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.091 Score=48.00 Aligned_cols=38 Identities=34% Similarity=0.429 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEE-eCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIV-HALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~-h~~t 266 (368)
++.+|+++|+|+++-+|+.++..|+++|++|++. .++.
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~ 40 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE 40 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4788999999998889999999999999999888 6653
No 388
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.62 E-value=0.17 Score=46.55 Aligned_cols=36 Identities=19% Similarity=0.251 Sum_probs=31.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
++++|+++|.|+++-+|+.++..|+++|+.|++..+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~ 38 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK 38 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 357899999999999999999999999999876543
No 389
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.61 E-value=0.12 Score=51.84 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=42.8
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------C------HhhhccCCCEEEEecC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------N------PEQITSEADIVIAAAG 284 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------~------L~~~~~~ADIVIsAvG 284 (368)
++|+|+|.|++|.||+.++..|.++|.+|+.+.+... | +...++++|+||..++
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 6799999999999999999999999999998865321 1 2234567899997765
No 390
>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+)). Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.
Probab=93.58 E-value=0.13 Score=51.75 Aligned_cols=70 Identities=17% Similarity=0.205 Sum_probs=52.0
Q ss_pred eEEEEccCccchHHHHHHHhhCC--------CEEEEEeC-----C----------------------------CCCHhhh
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHH--------ATVSIVHA-----L----------------------------TKNPEQI 272 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~g--------AtVti~h~-----~----------------------------t~~L~~~ 272 (368)
+|+|||+|.. |.++|..|.++| .+|++..+ . +.++++.
T Consensus 1 kI~VIGaG~w-GtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea 79 (342)
T TIGR03376 1 RVAVVGSGNW-GTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA 79 (342)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence 5899999886 999999999888 78988865 1 1357788
Q ss_pred ccCCCEEEEecCCCCc---cc--CCCcCCCcEEEEee
Q 017679 273 TSEADIVIAAAGVANL---VR--GSWLKPGAVVLDVG 304 (368)
Q Consensus 273 ~~~ADIVIsAvG~p~~---I~--~e~ik~gavVIDvg 304 (368)
+++||+||.|++.-.+ +. ..+++++..+|-+.
T Consensus 80 l~~ADiIIlAVPs~~i~~vl~~l~~~l~~~~~iVs~t 116 (342)
T TIGR03376 80 AKGADILVFVIPHQFLEGICKQLKGHVKPNARAISCI 116 (342)
T ss_pred HhcCCEEEEECChHHHHHHHHHHHhhcCCCCEEEEEe
Confidence 9999999999975322 11 23567777676653
No 391
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.57 E-value=0.16 Score=47.57 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=41.0
Q ss_pred ccceEEEEccCccchHHHHHHHhhCC---CE-EEEEeCCC----------------CCHhhhccCCCEEEEecCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHH---AT-VSIVHALT----------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~g---At-Vti~h~~t----------------~~L~~~~~~ADIVIsAvG~ 285 (368)
++.+|.|||.|.. |..++..|.+.+ .+ ++++++.. .+.++.+.++|+||.+++.
T Consensus 3 ~~~kI~iIG~G~m-g~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~ 76 (245)
T PRK07634 3 KKHRILFIGAGRM-AEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP 76 (245)
T ss_pred CCCeEEEECcCHH-HHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH
Confidence 4578999999886 999999998776 23 66666531 2455677899999999874
No 392
>PRK06139 short chain dehydrogenase; Provisional
Probab=93.57 E-value=0.061 Score=53.33 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=34.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++++|+++|.|+|+-+|+.++..|+++|++|.++.++.
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~ 41 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDE 41 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 46899999999988889999999999999999998753
No 393
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.54 E-value=0.087 Score=50.77 Aligned_cols=31 Identities=19% Similarity=0.190 Sum_probs=27.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
++|.|||.|.+ |.+++..|++.|.+|++++.
T Consensus 4 ~kI~VIG~G~m-G~~ia~~la~~g~~V~~~d~ 34 (282)
T PRK05808 4 QKIGVIGAGTM-GNGIAQVCAVAGYDVVMVDI 34 (282)
T ss_pred cEEEEEccCHH-HHHHHHHHHHCCCceEEEeC
Confidence 57999999875 99999999999999999974
No 394
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.53 E-value=0.13 Score=52.07 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=34.6
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+...+|++|+|+|+++-+|+.++..|+++|..|+++.|.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEec
Confidence 456789999999999999999999999999999888764
No 395
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.52 E-value=0.097 Score=49.07 Aligned_cols=36 Identities=22% Similarity=0.261 Sum_probs=31.4
Q ss_pred CccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||.++|.|+| .-+|+.++..|+++|++|.++.++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~ 42 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN 42 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc
Confidence 689999999997 335999999999999999988654
No 396
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.50 E-value=0.17 Score=50.44 Aligned_cols=54 Identities=13% Similarity=0.331 Sum_probs=40.9
Q ss_pred eEEEEccCccchHHHHHHHhhCCC-------EEEEEeCCC--------------------------CCHhhhccCCCEEE
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA-------TVSIVHALT--------------------------KNPEQITSEADIVI 280 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA-------tVti~h~~t--------------------------~~L~~~~~~ADIVI 280 (368)
||+|+|++|.||..++..|+..+. ++.+..... .+..+.+++||+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 799999966679999999987662 266665432 23457889999999
Q ss_pred EecCCCC
Q 017679 281 AAAGVAN 287 (368)
Q Consensus 281 sAvG~p~ 287 (368)
.+.|.|.
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999754
No 397
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=93.48 E-value=0.12 Score=48.32 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=31.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
.|+.++|+|||.|++ |..++..|.+.|. ++++++..
T Consensus 25 ~L~~~~V~ViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGAGGL-GSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 468899999999986 9999999999997 68888643
No 398
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.47 E-value=0.1 Score=52.87 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=31.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
.+++++|+|+|.|++ |..++..|.+.|. ++++++..
T Consensus 132 ~l~~~~VlvvG~GG~-Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGAGGL-GSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECCCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 367899999999996 9999999999997 78888653
No 399
>PRK12742 oxidoreductase; Provisional
Probab=93.46 E-value=0.11 Score=47.37 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=31.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
.++||+++|.|+++-+|+.++..|+++|++|.+..+
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC
Confidence 368999999999888899999999999999877644
No 400
>PRK07326 short chain dehydrogenase; Provisional
Probab=93.43 E-value=0.08 Score=48.38 Aligned_cols=37 Identities=24% Similarity=0.273 Sum_probs=33.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+.|++++|+|+++-+|+.++..|+++|++|+++.|+.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~ 40 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ 40 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH
Confidence 4689999999989899999999999999999988653
No 401
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=93.43 E-value=0.37 Score=45.16 Aligned_cols=94 Identities=20% Similarity=0.196 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CC----H
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KN----P 269 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~----L 269 (368)
+|....++..+.+..--.+|++++|.|.++.+|..++.++...|++|++..++. .+ +
T Consensus 126 ~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 205 (325)
T cd08253 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205 (325)
T ss_pred hhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHH
Confidence 444455555555433344799999999877789999999999999987765421 11 1
Q ss_pred hhhc--cCCCEEEEecCCCCc-ccCCCcCCCcEEEEeecC
Q 017679 270 EQIT--SEADIVIAAAGVANL-VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 270 ~~~~--~~ADIVIsAvG~p~~-I~~e~ik~gavVIDvg~n 306 (368)
.+.+ +..|+++.++|.... ...++++++..++++|..
T Consensus 206 ~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 206 LAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred HHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeec
Confidence 1222 247888888776543 233566777778888864
No 402
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.42 E-value=0.08 Score=48.58 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=32.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++|++++|+|.++-+|+.++..|.++|++|+++.+.
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~ 38 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLN 38 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999999997778999999999999999888765
No 403
>PRK06114 short chain dehydrogenase; Provisional
Probab=93.33 E-value=0.13 Score=47.99 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=34.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||.++|.|.++-+|+.++..|.++|++|.++.++.
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~ 42 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRT 42 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCc
Confidence 57899999999998899999999999999999987653
No 404
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=93.32 E-value=0.17 Score=49.16 Aligned_cols=93 Identities=26% Similarity=0.292 Sum_probs=61.6
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCCC-------------------C---
Q 017679 212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALTK-------------------N--- 268 (368)
Q Consensus 212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t~-------------------~--- 268 (368)
++|.....+..++..++ ..|.+|+|+|.| .+|..+++++...|+. |+++.+... +
T Consensus 145 l~~~~~ta~~~l~~~~~-~~g~~vlV~G~G-~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~ 222 (339)
T cd08239 145 LLCGIGTAYHALRRVGV-SGRDTVLVVGAG-PVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQE 222 (339)
T ss_pred hcchHHHHHHHHHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHH
Confidence 34444444555555444 359999999975 5699999999999998 877654311 1
Q ss_pred Hhhhcc--CCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679 269 PEQITS--EADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 269 L~~~~~--~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n 306 (368)
+.+.+. .+|+||.++|.+..+. -+.++++..++-+|..
T Consensus 223 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 223 IRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence 112222 4799999988765432 3567787777778864
No 405
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=93.29 E-value=0.18 Score=48.83 Aligned_cols=52 Identities=12% Similarity=0.104 Sum_probs=40.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCC----CEEEEEeCCC-----------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH----ATVSIVHALT-----------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g----AtVti~h~~t-----------------~~L~~~~~~ADIVIsAvG~ 285 (368)
.++.|||.|.+ |..++..|.+.| .+|+++.++. .+..+.++++|+||.++..
T Consensus 2 ~~I~iIG~G~m-G~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp 74 (277)
T PRK06928 2 EKIGFIGYGSM-ADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPP 74 (277)
T ss_pred CEEEEECccHH-HHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCH
Confidence 36899999876 999999999887 5788876542 2334557889999999873
No 406
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=93.28 E-value=0.28 Score=50.01 Aligned_cols=76 Identities=22% Similarity=0.281 Sum_probs=55.6
Q ss_pred CCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCCC-----------CCHhhhccCCCEEEEecCCCC
Q 017679 228 VEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALT-----------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 228 i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~t-----------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
.++.||+|.|+|-+ +.-...++..|.++|++|.+..-.- .++.+.++.||+||.++..+.
T Consensus 309 ~~~~~~~v~vlGlafK~~t~d~r~sp~~~~~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~ad~~v~~t~~~~ 388 (411)
T TIGR03026 309 GPLKGKTVLILGLAFKPNTDDVRESPALDIIELLKEKGAKVKAYDPLVPEEEVKGLPLIDDLEEALKGADALVILTDHDE 388 (411)
T ss_pred hcccCCEEEEEeeEecCCCCccccChHHHHHHHHHhCCCEEEEECCCCChhhhhhcccCCCHHHHHhCCCEEEEecCCHH
Confidence 36899999999932 2236788999999999999886431 366778999999999999887
Q ss_pred cccCC--CcCC---CcEEEEe
Q 017679 288 LVRGS--WLKP---GAVVLDV 303 (368)
Q Consensus 288 ~I~~e--~ik~---gavVIDv 303 (368)
|-..+ .+++ ..+|||.
T Consensus 389 ~~~~~~~~~~~~~~~~~v~D~ 409 (411)
T TIGR03026 389 FKDLDLEKIKDLMKGKVVVDT 409 (411)
T ss_pred HhccCHHHHHHhcCCCEEEeC
Confidence 73322 2321 3478883
No 407
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.28 E-value=0.14 Score=46.60 Aligned_cols=37 Identities=32% Similarity=0.282 Sum_probs=32.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++|+++|.|.++-+|+.++..|+++|++|++..++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999999999999999999999999999777654
No 408
>PRK05875 short chain dehydrogenase; Provisional
Probab=93.27 E-value=0.084 Score=49.66 Aligned_cols=37 Identities=22% Similarity=0.154 Sum_probs=33.4
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++++|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4689999999998888999999999999999988764
No 409
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=93.25 E-value=0.18 Score=50.09 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=58.0
Q ss_pred cCCHHHHHHHHHH-hCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-------------------CCHhhh
Q 017679 213 PCTPKGCIELLIR-SGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-------------------KNPEQI 272 (368)
Q Consensus 213 PcTa~gv~~lL~~-~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-------------------~~L~~~ 272 (368)
|++..-.+.+|.. ++... |.+|+|.|+++.||..+.+++...|++|.+.-+.. .++.+.
T Consensus 124 ~~~~~TA~~~l~~~~~l~~-g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~ 202 (326)
T COG0604 124 PLAGLTAWLALFDRAGLKP-GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHHHhcCCCC-CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHH
Confidence 4444444555554 33333 99999999888899999999999996544433221 123332
Q ss_pred c------cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 273 T------SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 273 ~------~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
+ +..|+|+..+|...+- .-..++++-.++.+|..
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~ 243 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGAL 243 (326)
T ss_pred HHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecC
Confidence 2 2478888888866542 34456666666666653
No 410
>PRK08643 acetoin reductase; Validated
Probab=93.25 E-value=0.097 Score=48.59 Aligned_cols=34 Identities=26% Similarity=0.257 Sum_probs=31.3
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
||.++|+|+++-+|+.++..|+++|++|.++.+.
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~ 35 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYN 35 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7899999999999999999999999999888765
No 411
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=93.22 E-value=0.24 Score=49.16 Aligned_cols=53 Identities=21% Similarity=0.429 Sum_probs=40.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~ 285 (368)
.||.|||+|. ||..+|..|+..|. ++.+++.+. .+. +.+++|||||.++|.
T Consensus 4 ~Ki~IiGaG~-VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy-~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQ-VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDY-SVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCH-HHhCCCCEEEECCCC
Confidence 4899999976 59999999988874 677776432 133 458999999999996
Q ss_pred CC
Q 017679 286 AN 287 (368)
Q Consensus 286 p~ 287 (368)
|.
T Consensus 82 ~~ 83 (312)
T cd05293 82 RQ 83 (312)
T ss_pred CC
Confidence 43
No 412
>PLN02214 cinnamoyl-CoA reductase
Probab=93.20 E-value=0.21 Score=49.28 Aligned_cols=35 Identities=20% Similarity=0.100 Sum_probs=31.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+++|+|+|.|+++.+|+.++..|+++|..|+.+.+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r 42 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR 42 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 57899999999889999999999999999887755
No 413
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=93.20 E-value=0.14 Score=47.72 Aligned_cols=37 Identities=27% Similarity=0.292 Sum_probs=33.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|+++|++|+++.+.
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~ 41 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRS 41 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCc
Confidence 3689999999999889999999999999999988764
No 414
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.19 E-value=0.12 Score=49.21 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=31.2
Q ss_pred CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||.++|.|+|. -+|+.+|..|+++|++|.++.++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~ 42 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQG 42 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCc
Confidence 6899999999973 34999999999999999988654
No 415
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.16 E-value=0.14 Score=48.09 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=32.1
Q ss_pred CCCccceEEEEccC---ccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRS---NIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g---~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||.++|.|+| ++ |+.++..|+++|++|.++.++
T Consensus 6 ~~~~~k~~lItGas~g~GI-G~a~a~~la~~G~~v~l~~r~ 45 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSI-AWGCARAFRALGAELAVTYLN 45 (258)
T ss_pred cccCCCEEEEECCCCCCcH-HHHHHHHHHHcCCEEEEEeCC
Confidence 35789999999986 55 999999999999999988665
No 416
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=93.11 E-value=0.32 Score=46.32 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=63.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC-----------------C--C----H
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT-----------------K--N----P 269 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t-----------------~--~----L 269 (368)
++.+..++..+...+....|.+++|.|.++.+|..++.++..+|+.|++..+.. . + +
T Consensus 120 ~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 199 (323)
T cd05282 120 YINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRV 199 (323)
T ss_pred hccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHH
Confidence 344444454555444445788999999988889999999999999877664421 1 1 1
Q ss_pred hhhc--cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 270 EQIT--SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 270 ~~~~--~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
.+.+ +..|+|+.++|.+... -.++++++..++++|..
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~ 239 (323)
T cd05282 200 KEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLL 239 (323)
T ss_pred HHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccC
Confidence 1122 3579999888865432 23567888888888854
No 417
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.11 E-value=0.15 Score=51.47 Aligned_cols=35 Identities=23% Similarity=0.469 Sum_probs=30.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~ 264 (368)
.|++++|+|||.|+. |.+++..|+..|. ++++++.
T Consensus 25 ~L~~~~VlivG~GGl-Gs~~a~~La~~Gvg~i~lvD~ 60 (355)
T PRK05597 25 SLFDAKVAVIGAGGL-GSPALLYLAGAGVGHITIIDD 60 (355)
T ss_pred HHhCCeEEEECCCHH-HHHHHHHHHHcCCCeEEEEeC
Confidence 468899999999996 9999999999996 7888864
No 418
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=93.11 E-value=0.14 Score=47.13 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=32.4
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|+++-+|+.++..|+++|++|.+..++
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~ 36 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLN 36 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 578999999999999999999999999999887654
No 419
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.05 E-value=0.14 Score=51.97 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=31.6
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCC-EEEEEeC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHA 264 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~ 264 (368)
..|++++|+|||.|++ |.+++..|...|. ++++++.
T Consensus 37 ~~l~~~~VliiG~Ggl-G~~v~~~La~~Gvg~i~ivD~ 73 (370)
T PRK05600 37 ERLHNARVLVIGAGGL-GCPAMQSLASAGVGTITLIDD 73 (370)
T ss_pred HHhcCCcEEEECCCHH-HHHHHHHHHHcCCCEEEEEeC
Confidence 3478899999999996 9999999999996 8999864
No 420
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.04 E-value=0.12 Score=52.05 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=47.5
Q ss_pred EEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
|+|+|+ |.||+.++..|.+++- +|++..++. .+|.+.++++|+||+++|...
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 689999 5569999999998873 789987752 136788999999999998641
Q ss_pred c--ccCCCcCCCcEEEEeec
Q 017679 288 L--VRGSWLKPGAVVLDVGT 305 (368)
Q Consensus 288 ~--I~~e~ik~gavVIDvg~ 305 (368)
- |-...++-|.-.||.++
T Consensus 80 ~~~v~~~~i~~g~~yvD~~~ 99 (386)
T PF03435_consen 80 GEPVARACIEAGVHYVDTSY 99 (386)
T ss_dssp HHHHHHHHHHHT-EEEESS-
T ss_pred hHHHHHHHHHhCCCeeccch
Confidence 1 33344566778888544
No 421
>PRK06198 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.11 Score=48.18 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t 266 (368)
.+++|+++|+|+++-+|+.++..|.++|++ |+++.++.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~ 41 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA 41 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH
Confidence 368999999999988999999999999998 88887653
No 422
>PLN02778 3,5-epimerase/4-reductase
Probab=93.02 E-value=0.26 Score=47.95 Aligned_cols=55 Identities=20% Similarity=0.159 Sum_probs=41.5
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC---Hhhhcc--CCCEEEEecCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN---PEQITS--EADIVIAAAGV 285 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~---L~~~~~--~ADIVIsAvG~ 285 (368)
..++|+|.|++|.+|..++..|.++|.+|+.....-.+ +...++ +.|+||.++|.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 34789999999999999999999999998765433222 233333 68999977763
No 423
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.02 E-value=0.16 Score=47.29 Aligned_cols=34 Identities=24% Similarity=0.326 Sum_probs=30.6
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~ 34 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARN 34 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4789999998889999999999999999998875
No 424
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=92.98 E-value=2.4 Score=40.65 Aligned_cols=93 Identities=15% Similarity=0.282 Sum_probs=55.2
Q ss_pred eeeecHH----HHHHHHHHHHHHHHHHH-------H--cCCCCCEEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEEE
Q 017679 75 TVIDGKS----IAEEIRSGIDKEVRRMK-------K--SIGKVPGLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVTE 140 (368)
Q Consensus 75 ~ildGk~----ia~~i~~~i~~~v~~l~-------~--~~g~~P~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~~ 140 (368)
++|+|++ |+++-++.+.+.+++|- . +.++...+++|.-. +++--....+...+.|++.|.+..+..
T Consensus 19 rvLn~~~~~~~Vs~~tr~rV~~~a~elgY~pn~~a~~l~~~~~~~Igvv~~~~~~~~~~~l~~gi~~~~~~~g~~~~~~~ 98 (328)
T PRK11303 19 YVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSIGLIIPDLENTSYARIAKYLERQARQRGYQLLIAC 98 (328)
T ss_pred HHHcCCCCCCCcCHHHHHHHHHHHHHhCCCCCHHHHHhhcCCCceEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEEe
Confidence 4678874 78877777777776651 0 01223345554422 223233344567788999999987654
Q ss_pred cCCCCCHHHHHHHHHHhhhccCccEEEEeC
Q 017679 141 FADGCTEDEVLNALSNYNQDSSINGILVQL 170 (368)
Q Consensus 141 l~~~~~~~el~~~I~~LN~D~~V~GIlVql 170 (368)
... ..+...+.++.+.. .+++||++.-
T Consensus 99 ~~~--~~~~~~~~~~~l~~-~~vdgiIi~~ 125 (328)
T PRK11303 99 SDD--QPDNEMRCAEHLLQ-RQVDALIVST 125 (328)
T ss_pred CCC--CHHHHHHHHHHHHH-cCCCEEEEcC
Confidence 432 33334456666654 4799999953
No 425
>PRK12827 short chain dehydrogenase; Provisional
Probab=92.96 E-value=0.16 Score=46.53 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=31.9
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
++++|+++|+|+++-+|+.++..|+++|++|++..+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 367899999999999999999999999999888543
No 426
>PRK06197 short chain dehydrogenase; Provisional
Probab=92.95 E-value=0.087 Score=50.76 Aligned_cols=37 Identities=27% Similarity=0.284 Sum_probs=33.1
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||.|+|.|+++-+|+.++..|+++|++|+++.++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999998888999999999999999888664
No 427
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=92.95 E-value=0.25 Score=49.27 Aligned_cols=53 Identities=28% Similarity=0.376 Sum_probs=40.9
Q ss_pred ceEEEEccCccchHHHHHHHhhCC-C-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH-A-TVSIVHALT--------------------------KNPEQITSEADIVIAAAG 284 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g-A-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG 284 (368)
+||+|||+|+ ||.++|++|..++ + ++.+..... .+ .+.++.||+||-+.|
T Consensus 1 ~KVaviGaG~-VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGAGN-VGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECCCh-HHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 5899999966 5999999998877 3 677776431 12 577999999998888
Q ss_pred CCC
Q 017679 285 VAN 287 (368)
Q Consensus 285 ~p~ 287 (368)
.|.
T Consensus 79 ~pr 81 (313)
T COG0039 79 VPR 81 (313)
T ss_pred CCC
Confidence 653
No 428
>PRK12937 short chain dehydrogenase; Provisional
Probab=92.94 E-value=0.16 Score=46.50 Aligned_cols=37 Identities=24% Similarity=0.196 Sum_probs=32.6
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|+++-+|+.++..|.++|++|+++.+.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~ 38 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAG 38 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCC
Confidence 4689999999998889999999999999998877553
No 429
>PRK08226 short chain dehydrogenase; Provisional
Probab=92.90 E-value=0.15 Score=47.46 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=33.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|.++-+|+.++..|+++|++|+++.+.
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDIS 39 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 678999999999999999999999999999988765
No 430
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.88 E-value=0.19 Score=47.98 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=41.3
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC---------------------CHhhhccCCCEEEEecC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK---------------------NPEQITSEADIVIAAAG 284 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~---------------------~L~~~~~~ADIVIsAvG 284 (368)
++++|+|+++.+|+.++..|.++|++|+++.++.. ++.+.++.+|+||..++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~ 73 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA 73 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence 47999999888999999999999999998876421 23455667899887665
No 431
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.86 E-value=0.22 Score=49.31 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=46.6
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC---------------------------------CCHhhhc
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT---------------------------------KNPEQIT 273 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t---------------------------------~~L~~~~ 273 (368)
..+++|+.|+|-|+|.-+||.+|..++++|+++.+...+. +.+++..
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 3578999999999999999999999999999776654331 1234566
Q ss_pred cCCCEEEEecCC
Q 017679 274 SEADIVIAAAGV 285 (368)
Q Consensus 274 ~~ADIVIsAvG~ 285 (368)
..-||+|+.+|.
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 778999988883
No 432
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.83 E-value=0.15 Score=47.80 Aligned_cols=37 Identities=16% Similarity=0.031 Sum_probs=32.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+..+|+++|+|+++-+|+.++..|+++|++|+.+.|+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecC
Confidence 4678999999998888999999999999999876554
No 433
>PRK08263 short chain dehydrogenase; Provisional
Probab=92.82 E-value=0.2 Score=47.37 Aligned_cols=35 Identities=17% Similarity=-0.009 Sum_probs=31.7
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+|.++|.|+++-+|+.++..|+++|+.|+++.++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARD 36 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 47899999999999999999999999999988765
No 434
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=92.79 E-value=0.14 Score=53.05 Aligned_cols=37 Identities=22% Similarity=0.294 Sum_probs=34.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+|+|||+|.. |--++-.|.+.|++||+..|.
T Consensus 171 ~~~~GKrV~VIG~GaS-A~di~~~l~~~ga~vt~~qRs 207 (443)
T COG2072 171 EDLRGKRVLVIGAGAS-AVDIAPELAEVGASVTLSQRS 207 (443)
T ss_pred cccCCCeEEEECCCcc-HHHHHHHHHhcCCeeEEEecC
Confidence 5799999999999998 999999999999999999875
No 435
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=92.78 E-value=0.17 Score=52.10 Aligned_cols=115 Identities=22% Similarity=0.218 Sum_probs=64.9
Q ss_pred EEcCCCCCHHHHHHHHHHhhhccCccEEEEeCCCCCCCCHHHHHhcCCcccccCccCcceeeeccccCCcCccccCCHHH
Q 017679 139 TEFADGCTEDEVLNALSNYNQDSSINGILVQLPLPQHLDEGKILDAVSLEKDVDGFHPLNIGNLAMRGREPLFIPCTPKG 218 (368)
Q Consensus 139 ~~l~~~~~~~el~~~I~~LN~D~~V~GIlVqlPLp~~id~~~il~~I~p~KDVDgl~~~N~G~L~~g~~~~~~~PcTa~g 218 (368)
...|..+.-.+.+..|.+=|-+....=|.-..||| .++..|-|... .+...++.+.. + .+.-++|.-..
T Consensus 52 ~~cp~~~~~~~~~~~~~~~~~~~a~~~~~~~~p~~------~~~g~vc~~~~-~C~~~C~~~~~--~--~~v~i~~l~~~ 120 (457)
T PRK11749 52 KACPVSIDIPEFIRLIAEGNLKGAAETILETNPLP------AVCGRVCPQER-LCEGACVRGKK--G--EPVAIGRLERY 120 (457)
T ss_pred ccCCCcCCHHHHHHHHHCCCHHHHHHHHHHhCCch------hhhcCcCCCcc-CHHHHhcCCCC--C--CCcchHHHHHH
Confidence 34455555555555554443333333344456888 36777776331 11111222211 1 23334554444
Q ss_pred HHHHHHHhCC------CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 219 CIELLIRSGV------EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 219 v~~lL~~~~i------~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+.+.-..++. .-.+|+|+|||+|-+ |..+|..|.++|.+|+++.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~VvIIGgGpa-Gl~aA~~l~~~g~~V~lie~~ 172 (457)
T PRK11749 121 ITDWAMETGWVLFKRAPKTGKKVAVIGAGPA-GLTAAHRLARKGYDVTIFEAR 172 (457)
T ss_pred HHHHHHhcCCCCCCCCccCCCcEEEECCCHH-HHHHHHHHHhCCCeEEEEccC
Confidence 4433222221 246899999998876 999999999999999998654
No 436
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=92.78 E-value=0.21 Score=38.88 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=28.9
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+|+|||.|-+ |--+|..|.+.|.+||++++..
T Consensus 1 ~vvViGgG~i-g~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGGGFI-GIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESSSHH-HHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECcCHH-HHHHHHHHHHhCcEEEEEeccc
Confidence 6899998765 9999999999999999999875
No 437
>PRK06914 short chain dehydrogenase; Provisional
Probab=92.76 E-value=0.16 Score=47.96 Aligned_cols=36 Identities=31% Similarity=0.204 Sum_probs=32.0
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
++|.++|.|+++.+|+.++..|+++|++|+++.++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~ 37 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP 37 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH
Confidence 578999999999999999999999999998886653
No 438
>PRK09620 hypothetical protein; Provisional
Probab=92.75 E-value=0.26 Score=46.82 Aligned_cols=59 Identities=22% Similarity=0.265 Sum_probs=44.0
Q ss_pred CccceEEEEccC----------------ccchHHHHHHHhhCCCEEEEEeCCCC-------------------C----Hh
Q 017679 230 IMGKNAVVIGRS----------------NIVGLPTSLLLQRHHATVSIVHALTK-------------------N----PE 270 (368)
Q Consensus 230 l~GK~VvVIG~g----------------~~VGrpla~lL~~~gAtVti~h~~t~-------------------~----L~ 270 (368)
++||+|+|-+.+ |-+|..+|..|.++|++|++++.... + +.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~ 80 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMK 80 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHH
Confidence 479999998654 67899999999999999998875321 1 12
Q ss_pred hhc--cCCCEEEEecCCCCc
Q 017679 271 QIT--SEADIVIAAAGVANL 288 (368)
Q Consensus 271 ~~~--~~ADIVIsAvG~p~~ 288 (368)
+.+ .++|+||-++..+.|
T Consensus 81 ~~~~~~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 81 SIITHEKVDAVIMAAAGSDW 100 (229)
T ss_pred HHhcccCCCEEEECccccce
Confidence 334 358999988776665
No 439
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=92.75 E-value=0.15 Score=53.87 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=29.0
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++|.|||.|.. |.++|..|++.|..|++.+++
T Consensus 6 ~kV~VIGaG~M-G~gIA~~la~aG~~V~l~d~~ 37 (503)
T TIGR02279 6 VTVAVIGAGAM-GAGIAQVAASAGHQVLLYDIR 37 (503)
T ss_pred cEEEEECcCHH-HHHHHHHHHhCCCeEEEEeCC
Confidence 67999999865 999999999999999999865
No 440
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.72 E-value=0.17 Score=49.21 Aligned_cols=39 Identities=33% Similarity=0.354 Sum_probs=35.0
Q ss_pred CCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 227 GVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
..+++||.++|.|+++-+|+.++..|+++|++|.++.+.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~ 45 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVA 45 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCC
Confidence 467899999999999989999999999999999888653
No 441
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=92.72 E-value=0.15 Score=47.41 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=33.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|+|.++-+|+.++..|.++|++|.++.++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~ 44 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 3679999999999999999999999999998887654
No 442
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.72 E-value=0.17 Score=48.03 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=33.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
+++||+++|.|+++-+|+.++..|+++|++|.++.++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~ 39 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKT 39 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 3689999999999999999999999999999988764
No 443
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional
Probab=92.71 E-value=0.18 Score=56.01 Aligned_cols=122 Identities=19% Similarity=0.140 Sum_probs=72.1
Q ss_pred ceEEEEccCccchHHH-HHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCCCC
Q 017679 233 KNAVVIGRSNIVGLPT-SLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPVDV 310 (368)
Q Consensus 233 K~VvVIG~g~~VGrpl-a~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~~~ 310 (368)
+++.|||.|+. |+.. |.+|.++|++|+++..+.....+.++...|-+.. |.. .+.+. .+.+|+--|+++...
T Consensus 5 ~~i~viG~G~s-G~salA~~L~~~G~~V~~sD~~~~~~~~~L~~~gi~~~~-g~~----~~~~~~~d~vV~SpgI~~~~p 78 (809)
T PRK14573 5 LFYHFIGIGGI-GMSALAHILLDRGYSVSGSDLSEGKTVEKLKAKGARFFL-GHQ----EEHVPEDAVVVYSSSISKDNV 78 (809)
T ss_pred ceEEEEEecHH-hHHHHHHHHHHCCCeEEEECCCCChHHHHHHHCCCEEeC-CCC----HHHcCCCCEEEECCCcCCCCH
Confidence 57999999998 9998 9999999999999986543222334444443322 211 12221 245565555554320
Q ss_pred CCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 311 SVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 311 ~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
....-...+-++.+++++-. ..+..-.| -|-|=-|.-|+..|+.++++.+
T Consensus 79 ~~~~a~~~gi~v~~~~el~~~~~~~~~~I-aITGTnGKTTTt~li~~iL~~~ 129 (809)
T PRK14573 79 EYLSAKSRGNRLVHRAELLAELMQEQISI-LVSGSHGKTTVSSLITAIFQEA 129 (809)
T ss_pred HHHHHHHCCCcEEeHHHHHHHHHcCCCEE-EEECCCCHHHHHHHHHHHHHhC
Confidence 00000011336888888732 21210112 4568888999999999998764
No 444
>PRK09135 pteridine reductase; Provisional
Probab=92.71 E-value=0.16 Score=46.39 Aligned_cols=36 Identities=19% Similarity=0.138 Sum_probs=32.7
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++++++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 467899999999999999999999999999988764
No 445
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.71 E-value=0.18 Score=51.74 Aligned_cols=125 Identities=22% Similarity=0.214 Sum_probs=69.4
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHh---hhccCCCEEEEecCCCCc---ccCCCcCCCcEEEEeecC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPE---QITSEADIVIAAAGVANL---VRGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~---~~~~~ADIVIsAvG~p~~---I~~e~ik~gavVIDvg~n 306 (368)
+|+|||.|+. |+.+|.+|.++|++|+++.+... ... +.+....+-+-. |.... ++..+-..+.+|+--|++
T Consensus 2 ~v~viG~G~s-G~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~-g~~~~~~~~~~~~~~~d~vv~s~gi~ 79 (459)
T PRK02705 2 IAHVIGLGRS-GIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKL-GKPLELESFQPWLDQPDLVVVSPGIP 79 (459)
T ss_pred eEEEEccCHH-HHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEE-CCccchhhhhHHhhcCCEEEECCCCC
Confidence 6899999998 99999999999999999986532 121 234343443321 22110 001111234566655555
Q ss_pred CCCCCCCCCCCCCcEEEcccchhh-hhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 307 PVDVSVDPSCEYGYRLMGDVCYEE-AMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 307 ~~~~~~d~t~~~~~kl~GDVd~~~-~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
+..+....-.+.+-+++++.++.. .....-.| -|-|=.|.-|+.-|+.++++.+
T Consensus 80 ~~~~~~~~a~~~~i~v~~~~~~~~~~~~~~~~I-~VTGT~GKTTTt~ml~~iL~~~ 134 (459)
T PRK02705 80 WDHPTLVELRERGIEVIGEIELAWRALKHIPWV-GITGTNGKTTVTALLAHILQAA 134 (459)
T ss_pred CCCHHHHHHHHcCCcEEEhHHHHHHhhcCCCEE-EEeCCCchHHHHHHHHHHHHHc
Confidence 432000000011335677776532 11111112 4557788999999999988764
No 446
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=92.68 E-value=0.19 Score=49.57 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=31.0
Q ss_pred CCCCccceEEEEcc---CccchHHHHHHHhhCCCEEEEE
Q 017679 227 GVEIMGKNAVVIGR---SNIVGLPTSLLLQRHHATVSIV 262 (368)
Q Consensus 227 ~i~l~GK~VvVIG~---g~~VGrpla~lL~~~gAtVti~ 262 (368)
..+++||.++|-|+ +++ |+.+|..|+++||+|.+.
T Consensus 4 ~~~l~gk~alITGa~~s~GI-G~a~A~~la~~Ga~Vv~~ 41 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGY-GWAIAKALAAAGAEILVG 41 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcH-HHHHHHHHHHCCCEEEEE
Confidence 45689999999999 565 999999999999999883
No 447
>PRK10727 DNA-binding transcriptional regulator GalR; Provisional
Probab=92.67 E-value=4.2 Score=39.45 Aligned_cols=88 Identities=11% Similarity=0.143 Sum_probs=52.3
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHHHHcCCCCC-------------EEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEE
Q 017679 75 TVIDGKS-IAEEIRSGIDKEVRRMKKSIGKVP-------------GLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVT 139 (368)
Q Consensus 75 ~ildGk~-ia~~i~~~i~~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~ 139 (368)
++|+|+. |+++-++.+.+.+++| |.+| .+++|.-. .++--....+...+.|++.|......
T Consensus 20 rvLn~~~~Vs~~tr~rV~~~a~el----gY~pn~~ar~l~~~~~~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~ 95 (343)
T PRK10727 20 RVINNSPKASEASRLAVHSAMESL----SYHPNANARALAQQSTETVGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIG 95 (343)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCCCHHHHhhhhCCCCeEEEEeCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 4677764 6666666666665554 4444 34444322 12222334556778899999887654
Q ss_pred EcCCCCCHHHHHHHHHHhhhccCccEEEEe
Q 017679 140 EFADGCTEDEVLNALSNYNQDSSINGILVQ 169 (368)
Q Consensus 140 ~l~~~~~~~el~~~I~~LN~D~~V~GIlVq 169 (368)
.... ++++..+.++.+.. .+++||++.
T Consensus 96 ~~~~--~~~~~~~~i~~l~~-~~vdgiIi~ 122 (343)
T PRK10727 96 NGYH--NEQKERQAIEQLIR-HRCAALVVH 122 (343)
T ss_pred eCCC--CHHHHHHHHHHHHh-cCCCEEEEe
Confidence 4332 33444566777654 479999997
No 448
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=92.66 E-value=0.31 Score=48.41 Aligned_cols=76 Identities=22% Similarity=0.215 Sum_probs=52.2
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCC-EEEEEeCCC-------------------CCHhh----hcc-CCCEEEEecC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT-------------------KNPEQ----ITS-EADIVIAAAG 284 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t-------------------~~L~~----~~~-~ADIVIsAvG 284 (368)
-.|++|+|.|.| .+|..+++++...|+ .|+++.+.. .++.+ .+. .+|+||.++|
T Consensus 190 ~~g~~VlV~G~G-~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G 268 (371)
T cd08281 190 RPGQSVAVVGLG-GVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAG 268 (371)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCC
Confidence 368999999976 569999999999999 577664321 12212 111 4799999998
Q ss_pred CCCccc--CCCcCCCcEEEEeecC
Q 017679 285 VANLVR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 285 ~p~~I~--~e~ik~gavVIDvg~n 306 (368)
.+..+. -+.++++..++-+|..
T Consensus 269 ~~~~~~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 269 SVPALETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred ChHHHHHHHHHHhcCCEEEEEccC
Confidence 765432 3467777777778754
No 449
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.65 E-value=0.18 Score=46.39 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.5
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+++|+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~ 37 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH 37 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence 57899999999988999999999999999987654
No 450
>PRK07677 short chain dehydrogenase; Provisional
Probab=92.62 E-value=0.16 Score=47.24 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=31.5
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
||+++|.|.++-+|+.++..|+++|++|+++.++.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~ 35 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK 35 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999999999999999999999887653
No 451
>PRK06701 short chain dehydrogenase; Provisional
Probab=92.61 E-value=0.16 Score=48.90 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=34.4
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||+++|.|+++-+|..++..|+++|++|+++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46789999999999989999999999999999988765
No 452
>PRK05993 short chain dehydrogenase; Provisional
Probab=92.61 E-value=0.15 Score=48.47 Aligned_cols=36 Identities=19% Similarity=0.125 Sum_probs=32.1
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.||.++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~ 38 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE 38 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 478999999988889999999999999999988753
No 453
>PRK07577 short chain dehydrogenase; Provisional
Probab=92.60 E-value=0.21 Score=45.51 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.6
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.+|+++|.|+++-+|+.++..|+++|++|+++.|+.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~ 37 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSA 37 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999999999999999999999887753
No 454
>PRK07806 short chain dehydrogenase; Provisional
Probab=92.59 E-value=0.2 Score=46.16 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=32.4
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~ 39 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQ 39 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 678999999998888999999999999999888664
No 455
>PRK10423 transcriptional repressor RbsR; Provisional
Probab=92.58 E-value=3.1 Score=39.78 Aligned_cols=88 Identities=17% Similarity=0.362 Sum_probs=55.9
Q ss_pred eeeecHH-HHHHHHHHHHHHHHHHHHcCCCCC-------------EEEEEEeC-CCcccHHHHHHHHHHHHHcCCeEEEE
Q 017679 75 TVIDGKS-IAEEIRSGIDKEVRRMKKSIGKVP-------------GLAVILVG-ERRDSQTYVRNKIKACEEVGIKSIVT 139 (368)
Q Consensus 75 ~ildGk~-ia~~i~~~i~~~v~~l~~~~g~~P-------------~LaiI~vG-~d~aS~~Yv~~k~k~a~~~GI~~~~~ 139 (368)
++|+|++ ++++.++.+.+.+++| |.+| .+++|.-. +++--..+.+...+.|++.|.+..+.
T Consensus 17 rvLn~~~~vs~~tr~rV~~~a~~l----gY~pn~~a~~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~ 92 (327)
T PRK10423 17 HVINKDRFVSEAITAKVEAAIKEL----NYAPSALARSLKLNQTRTIGMLITASTNPFYSELVRGVERSCFERGYSLVLC 92 (327)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHH----CCCccHHHHHHhhCCCCeEEEEeCCCCCCcHHHHHHHHHHHHHHcCCEEEEE
Confidence 4577664 6666666666655554 4444 45554422 23444566678889999999987765
Q ss_pred EcCCCCCHHHHHHHHHHhhhccCccEEEEe
Q 017679 140 EFADGCTEDEVLNALSNYNQDSSINGILVQ 169 (368)
Q Consensus 140 ~l~~~~~~~el~~~I~~LN~D~~V~GIlVq 169 (368)
.... +.++..+.++.+.+ .+++||++.
T Consensus 93 ~~~~--~~~~~~~~~~~l~~-~~vdGiI~~ 119 (327)
T PRK10423 93 NTEG--DEQRMNRNLETLMQ-KRVDGLLLL 119 (327)
T ss_pred eCCC--CHHHHHHHHHHHHH-cCCCEEEEe
Confidence 4332 44455577777755 479999996
No 456
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.58 E-value=0.22 Score=47.00 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=30.9
Q ss_pred CCccceEEEEccC--ccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRS--NIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g--~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+++||.++|.|++ .-+|+.++..|+++|++|+++.+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r 41 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA 41 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC
Confidence 5789999999985 33499999999999999998854
No 457
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=92.57 E-value=0.11 Score=47.96 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=33.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.++||+++|.|.++-+|..++..|+++|++|+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~ 45 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRT 45 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCC
Confidence 3689999999999999999999999999999888765
No 458
>PRK07201 short chain dehydrogenase; Provisional
Probab=92.52 E-value=0.18 Score=53.75 Aligned_cols=38 Identities=26% Similarity=0.340 Sum_probs=34.2
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+++||+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~ 405 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG 405 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 57799999999988889999999999999999987753
No 459
>PLN00106 malate dehydrogenase
Probab=92.51 E-value=0.39 Score=48.00 Aligned_cols=57 Identities=26% Similarity=0.362 Sum_probs=42.4
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCC--EEEEEeC-----------------------CCCCHhhhccCCCEEEEecCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHA-----------------------LTKNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~-----------------------~t~~L~~~~~~ADIVIsAvG~ 285 (368)
..+||+|||+.|.||..++..|+.++. ++.++.. .+.++.+.+++||+||.+.|.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~ 96 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGV 96 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCC
Confidence 347999999944479999999986552 5665542 123567889999999999996
Q ss_pred CC
Q 017679 286 AN 287 (368)
Q Consensus 286 p~ 287 (368)
|.
T Consensus 97 ~~ 98 (323)
T PLN00106 97 PR 98 (323)
T ss_pred CC
Confidence 53
No 460
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=92.50 E-value=0.17 Score=53.41 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=52.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------------------------CHhhhcc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------------------------NPEQITS 274 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------------------------~L~~~~~ 274 (368)
++|.|||.|.. |.++|..|++.|..|++.+++.. ++ +.+.
T Consensus 8 ~~V~VIGaG~M-G~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~-~~~~ 85 (507)
T PRK08268 8 ATVAVIGAGAM-GAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEAL-ADLA 85 (507)
T ss_pred CEEEEECCCHH-HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCH-HHhC
Confidence 68999999865 99999999999999999976531 22 2357
Q ss_pred CCCEEEEecCCCCcccCC-------CcCCCcEE-EEeecC
Q 017679 275 EADIVIAAAGVANLVRGS-------WLKPGAVV-LDVGTC 306 (368)
Q Consensus 275 ~ADIVIsAvG~p~~I~~e-------~ik~gavV-IDvg~n 306 (368)
+||+||.++....-++.. ..++++++ .|.++-
T Consensus 86 ~aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl 125 (507)
T PRK08268 86 DCDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSL 125 (507)
T ss_pred CCCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 999999998754323322 34677776 366543
No 461
>PRK07109 short chain dehydrogenase; Provisional
Probab=92.48 E-value=0.12 Score=51.16 Aligned_cols=37 Identities=27% Similarity=0.231 Sum_probs=33.7
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++|.++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~ 41 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARG 41 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688999999998889999999999999999998875
No 462
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=92.48 E-value=0.3 Score=48.25 Aligned_cols=94 Identities=22% Similarity=0.186 Sum_probs=59.3
Q ss_pred ccCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCE-EEEEeCCC-------------------CCHh-
Q 017679 212 IPCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHAT-VSIVHALT-------------------KNPE- 270 (368)
Q Consensus 212 ~PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAt-Vti~h~~t-------------------~~L~- 270 (368)
++|.....+..+....---.|++|+|.|.| .+|..++.++...|++ |+.+.+.. .+..
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g-~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~ 235 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCG-GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVE 235 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHH
Confidence 344433334333322222369999999975 5699999999999985 76664321 1221
Q ss_pred ---hhc--cCCCEEEEecCCCCccc--CCCcCCCcEEEEeecC
Q 017679 271 ---QIT--SEADIVIAAAGVANLVR--GSWLKPGAVVLDVGTC 306 (368)
Q Consensus 271 ---~~~--~~ADIVIsAvG~p~~I~--~e~ik~gavVIDvg~n 306 (368)
+.+ ..+|+||.++|.+..+. -+.+++|-.++-+|..
T Consensus 236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCC
Confidence 222 24799999999765432 2467888888888864
No 463
>PLN02602 lactate dehydrogenase
Probab=92.43 E-value=0.32 Score=49.14 Aligned_cols=52 Identities=21% Similarity=0.393 Sum_probs=40.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~ 285 (368)
+||.|||+|. ||..+|..|+..+. ++.++.... .+ .+.+++|||||.+.|.
T Consensus 38 ~KI~IIGaG~-VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~d-y~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGN-VGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTD-YAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCH-HHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCC-HHHhCCCCEEEECCCC
Confidence 6999999976 59999999988873 577776432 12 2458999999999997
Q ss_pred C
Q 017679 286 A 286 (368)
Q Consensus 286 p 286 (368)
|
T Consensus 116 ~ 116 (350)
T PLN02602 116 R 116 (350)
T ss_pred C
Confidence 5
No 464
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=92.42 E-value=0.27 Score=48.31 Aligned_cols=51 Identities=25% Similarity=0.390 Sum_probs=40.6
Q ss_pred EEEEccCccchHHHHHHHhhCC--CEEEEEeCCC-------------------------CCHhhhccCCCEEEEecCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHH--ATVSIVHALT-------------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~g--AtVti~h~~t-------------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
+.|||+|. ||.+++..|+..| .++++++.+. .+ .+.+++|||||.++|.|.
T Consensus 1 i~iiGaG~-VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGN-VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence 47999987 6999999999888 4788887532 12 467899999999999753
No 465
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=92.37 E-value=0.28 Score=46.97 Aligned_cols=88 Identities=19% Similarity=0.129 Sum_probs=57.6
Q ss_pred HHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-----------------CH-hh----hc-cC
Q 017679 219 CIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-----------------NP-EQ----IT-SE 275 (368)
Q Consensus 219 v~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-----------------~L-~~----~~-~~ 275 (368)
.+..+.+.++.-.|.+|+|.|.++.+|..++.++...|++|+++.+... +. .+ .. ..
T Consensus 134 ~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~ 213 (326)
T cd08289 134 SIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQR 213 (326)
T ss_pred HHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHHHHHHHhhccCC
Confidence 3443444444445789999999777899999999999998876654321 10 11 11 34
Q ss_pred CCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 276 ADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 276 ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
.|+|+.++|...+- --..++++..+|++|..
T Consensus 214 ~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~ 245 (326)
T cd08289 214 WAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLT 245 (326)
T ss_pred cCEEEECCcHHHHHHHHHHhhcCCEEEEEeec
Confidence 78888888864321 12346778888999864
No 466
>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=92.36 E-value=0.32 Score=49.67 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=65.9
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCCCHh--------------hhccCCCEEEEecCCCCcccCCC---
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKNPE--------------QITSEADIVIAAAGVANLVRGSW--- 293 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~L~--------------~~~~~ADIVIsAvG~p~~I~~e~--- 293 (368)
..++|+|||-|.+ |..+|++|.++|++|+.+..+...+. ....++|++|...|.+.. .++
T Consensus 2 ~~~~i~iiGlG~~-G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~--~~~l~~ 78 (418)
T PRK00683 2 GLQRVVVLGLGVT-GKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKE--HPWVQA 78 (418)
T ss_pred CCCeEEEEEECHH-HHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCC--cHHHHH
Confidence 3578999999997 99999999999999999886543211 113557877777665421 111
Q ss_pred -cCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhh-----ccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 294 -LKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAM-----RLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 294 -ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~-----~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.+.|+ +++.|.++.-.. ...- -|-|-.|.-|+.-|+.++++.+
T Consensus 79 A~~~g~----------------------~vv~~~~~~~~~~~~~~~~~I---~ITGT~GKTTTt~ml~~iL~~~ 127 (418)
T PRK00683 79 AIASHI----------------------PVVTDIQLAFQTPEFTRYPSL---GITGSTGKTTTILFLEHLLKRL 127 (418)
T ss_pred HHHCCC----------------------cEEEHHHHHHhhhhcCCCCEE---EEECCCChHHHHHHHHHHHHHc
Confidence 12332 234444331110 0112 3458889999999999998764
No 467
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.35 E-value=0.17 Score=48.10 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=30.8
Q ss_pred CccceEEEEccCc--cchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSN--IVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~--~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||.++|.|+|. -+|+.++..|+++|++|.++.+.
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~ 41 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN 41 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc
Confidence 6899999999862 34999999999999999887654
No 468
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=92.34 E-value=0.29 Score=48.45 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=40.1
Q ss_pred eEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC-------------------C------CHhhhccCCCEEEEecCCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT-------------------K------NPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t-------------------~------~L~~~~~~ADIVIsAvG~p 286 (368)
||.|||+|. ||.++|..|+.++. ++.+++... . .-.+.+++|||||.++|.|
T Consensus 1 Ki~IIGaG~-VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~~ 79 (307)
T cd05290 1 KLVVIGAGH-VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCH-HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCCC
Confidence 589999976 59999999988773 577775431 0 1247789999999999975
Q ss_pred C
Q 017679 287 N 287 (368)
Q Consensus 287 ~ 287 (368)
.
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
Confidence 3
No 469
>PRK08267 short chain dehydrogenase; Provisional
Probab=92.29 E-value=0.16 Score=47.29 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=30.6
Q ss_pred ceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
|+++|+|+++-+|+.++..|+++|++|.++.++.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~ 35 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINE 35 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH
Confidence 7899999999999999999999999999987643
No 470
>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase. UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.
Probab=92.28 E-value=0.22 Score=51.29 Aligned_cols=121 Identities=19% Similarity=0.183 Sum_probs=67.3
Q ss_pred eEEEEccCccchHH-HHHHHhhCCCEEEEEeCCCCCHhhhccCCCEEEEecCCCCcccCCCcC-CCcEEEEeecCCCCCC
Q 017679 234 NAVVIGRSNIVGLP-TSLLLQRHHATVSIVHALTKNPEQITSEADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCPVDVS 311 (368)
Q Consensus 234 ~VvVIG~g~~VGrp-la~lL~~~gAtVti~h~~t~~L~~~~~~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~~~~~ 311 (368)
++.+||.|++ |+. +|.+|.++|++|+++..+.....+.+++..+-+. .|. +.+.+. ...+|+--|+++..+.
T Consensus 1 ~~~~iGiggs-Gm~~la~~L~~~G~~v~~~D~~~~~~~~~l~~~gi~~~-~g~----~~~~~~~~d~vV~spgi~~~~p~ 74 (448)
T TIGR01082 1 KIHFVGIGGI-GMSGIAEILLNRGYQVSGSDIAENATTKRLEALGIPIY-IGH----SAENLDDADVVVVSAAIKDDNPE 74 (448)
T ss_pred CEEEEEECHH-HHHHHHHHHHHCCCeEEEECCCcchHHHHHHHCcCEEe-CCC----CHHHCCCCCEEEECCCCCCCCHH
Confidence 3789999998 997 9999999999999998654222222333232221 111 111121 2345555555442100
Q ss_pred CCCCCCCCcEEEcccchh-hhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 312 VDPSCEYGYRLMGDVCYE-EAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 312 ~d~t~~~~~kl~GDVd~~-~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
...-.+.+-.++++.++- ...+.. .+--|-|=-|.-|+..|+.++++.+
T Consensus 75 ~~~a~~~~i~v~~~~el~~~~~~~~-~~IaITGTnGKTTTt~ll~~iL~~~ 124 (448)
T TIGR01082 75 IVEAKERGIPVIRRAEMLAELMRFR-HSIAVAGTHGKTTTTAMIAVILKEA 124 (448)
T ss_pred HHHHHHcCCceEeHHHHHHHHHhcC-cEEEEECCCChHHHHHHHHHHHHHc
Confidence 000001133578888763 221111 1224557788999999999998765
No 471
>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase.
Probab=92.27 E-value=0.34 Score=49.37 Aligned_cols=121 Identities=20% Similarity=0.252 Sum_probs=70.0
Q ss_pred eEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-CHh---hhcc-CCCEEEEecCCCCcccCCCcC-CCcEEEEeecCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK-NPE---QITS-EADIVIAAAGVANLVRGSWLK-PGAVVLDVGTCP 307 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~-~L~---~~~~-~ADIVIsAvG~p~~I~~e~ik-~gavVIDvg~n~ 307 (368)
++.|||-|+. |+++|.+|.++|++|+++..... ... ..++ ...|.+. .|.. .+.+. ...+|+--|+++
T Consensus 1 ~~~~iG~G~~-G~a~a~~l~~~G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~-~g~~----~~~~~~~d~vv~sp~i~~ 74 (433)
T TIGR01087 1 KILILGLGKT-GRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLH-TGLH----LEDLNNADLVVKSPGIPP 74 (433)
T ss_pred CEEEEEeCHh-HHHHHHHHHHCCCEEEEEeCCCCccchhHHHHHhhccCcEEE-ecCc----hHHhccCCEEEECCCCCC
Confidence 4789999998 99999999999999999986542 121 1222 1244332 2211 11221 245676666665
Q ss_pred CCCCCCCCCCCCcEEEcccchhhhhccceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 308 VDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 308 ~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
.......-.+.+-++.++.++-...-.. .+--|-|--|.-|+..|+.++++.+
T Consensus 75 ~~p~~~~a~~~~i~i~~~~e~~~~~~~~-~~I~VTGT~GKTTTt~li~~iL~~~ 127 (433)
T TIGR01087 75 DHPLVQAAAKRGIPVVGDIELFLRLVPL-PVVAITGTNGKTTTTSLLYHLLKAA 127 (433)
T ss_pred CCHHHHHHHHCCCcEEEHHHHHHhhcCC-CEEEEECCCCHHHHHHHHHHHHHhc
Confidence 3200000001133577777762211111 1124568889999999999999765
No 472
>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=92.25 E-value=0.27 Score=48.94 Aligned_cols=78 Identities=23% Similarity=0.222 Sum_probs=57.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCC---CCccc--
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGV---ANLVR-- 290 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~---p~~I~-- 290 (368)
|+||+|+|||.|.- |++=|..|...|.+|+|--+.. .+..+.+++||+|..-++- +....
T Consensus 16 LkgK~iaIIGYGsQ-G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~ 94 (338)
T COG0059 16 LKGKKVAIIGYGSQ-GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKE 94 (338)
T ss_pred hcCCeEEEEecChH-HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHH
Confidence 68999999999986 9999999999999999987653 2567899999999998862 22222
Q ss_pred -CCCcCCCc-EEEEeecCCC
Q 017679 291 -GSWLKPGA-VVLDVGTCPV 308 (368)
Q Consensus 291 -~e~ik~ga-vVIDvg~n~~ 308 (368)
...+++|+ +.+-=|+|..
T Consensus 95 I~p~Lk~G~aL~FaHGfNih 114 (338)
T COG0059 95 IAPNLKEGAALGFAHGFNIH 114 (338)
T ss_pred hhhhhcCCceEEecccccee
Confidence 12345554 4444455543
No 473
>PRK07985 oxidoreductase; Provisional
Probab=92.24 E-value=0.21 Score=48.27 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=32.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
.++||+++|.|+++-+|+.++..|+++|++|+++.+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~ 81 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYL 81 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC
Confidence 589999999999988999999999999999988754
No 474
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=92.21 E-value=0.28 Score=46.04 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=41.8
Q ss_pred EEEEccCccchHHHHHHHhhCCCEEEEEeCCCCC----------------HhhhccCCCEEEEecCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHATVSIVHALTKN----------------PEQITSEADIVIAAAGVA 286 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~~----------------L~~~~~~ADIVIsAvG~p 286 (368)
|+|.|++|.+|..++..|+++|.+|+...|.... +.+.+...|+||..+|.+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~ 68 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEP 68 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCC
Confidence 5899999999999999999999999998875321 224567799999888754
No 475
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=92.20 E-value=0.3 Score=44.20 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=26.1
Q ss_pred eEEEEccCccchHHHHHHHhhCCC-EEEEEeCC
Q 017679 234 NAVVIGRSNIVGLPTSLLLQRHHA-TVSIVHAL 265 (368)
Q Consensus 234 ~VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~ 265 (368)
+|+|||.|++ |..++..|.+.|. ++++++..
T Consensus 1 ~VlViG~Ggl-Gs~ia~~La~~Gvg~i~lvD~D 32 (174)
T cd01487 1 KVGIAGAGGL-GSNIAVLLARSGVGNLKLVDFD 32 (174)
T ss_pred CEEEECcCHH-HHHHHHHHHHcCCCeEEEEeCC
Confidence 5899999886 9999999999997 68888643
No 476
>PRK12744 short chain dehydrogenase; Provisional
Probab=92.20 E-value=0.19 Score=46.83 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=30.8
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEe
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVH 263 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h 263 (368)
.++||+++|.|+++-+|+.++..|+++|++|.+++
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~ 39 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH 39 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence 46899999999999999999999999999865554
No 477
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=92.18 E-value=0.36 Score=47.98 Aligned_cols=77 Identities=21% Similarity=0.282 Sum_probs=58.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC--------------CCHhhhccCCCEEEEecCCCCcc-----
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT--------------KNPEQITSEADIVIAAAGVANLV----- 289 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t--------------~~L~~~~~~ADIVIsAvG~p~~I----- 289 (368)
+-+-+++=-||-|.. |.+++..|.+.|.+||+.+++- ....|..+++|+||+.++.|.-+
T Consensus 32 ~~s~~~iGFIGLG~M-G~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~v~~ 110 (327)
T KOG0409|consen 32 TPSKTRIGFIGLGNM-GSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKDVLL 110 (327)
T ss_pred CcccceeeEEeeccc-hHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHHHhc
Confidence 345788999999986 9999999999999999999873 23568899999999999977532
Q ss_pred cCC----CcCCCcEE-EEeecC
Q 017679 290 RGS----WLKPGAVV-LDVGTC 306 (368)
Q Consensus 290 ~~e----~ik~gavV-IDvg~n 306 (368)
... -+++|... ||..+-
T Consensus 111 g~~Gvl~g~~~g~~~~vDmSTi 132 (327)
T KOG0409|consen 111 GKSGVLSGIRPGKKATVDMSTI 132 (327)
T ss_pred CCCcceeeccCCCceEEecccc
Confidence 221 23455544 787653
No 478
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=92.18 E-value=0.71 Score=47.48 Aligned_cols=75 Identities=11% Similarity=0.128 Sum_probs=55.1
Q ss_pred CCCCccceEEEEccC---------ccchHHHHHHHhhCC-CEEEEEeCC-------------CCCHhhhccCCCEEEEec
Q 017679 227 GVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHH-ATVSIVHAL-------------TKNPEQITSEADIVIAAA 283 (368)
Q Consensus 227 ~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~g-AtVti~h~~-------------t~~L~~~~~~ADIVIsAv 283 (368)
+.+++||+|.|+|-+ +.-...++..|.++| +.|.+..-. ..++.+.++.||+||..|
T Consensus 315 ~~~~~~~~v~vlGlafK~~t~d~r~Sp~~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t 394 (415)
T PRK11064 315 DKRASEVKIACFGLAFKPNIDDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLDGLVTLVSLDEALATADVLVMLV 394 (415)
T ss_pred ccCcCCCEEEEEeeEECCCCcchhhChHHHHHHHHHhcCCcEEEEECCCCCchhhhccCceeeCCHHHHHhCCCEEEECC
Confidence 567899999999932 223778999999996 999886432 135778889999999999
Q ss_pred CCCCcccCC--CcCCCcEEEE
Q 017679 284 GVANLVRGS--WLKPGAVVLD 302 (368)
Q Consensus 284 G~p~~I~~e--~ik~gavVID 302 (368)
..+.|-..+ -++. .+|||
T Consensus 395 ~~~~~~~~~~~~~~~-~~v~D 414 (415)
T PRK11064 395 DHSQFKAINGDNVHQ-QWVVD 414 (415)
T ss_pred CCHHhccCCHHHhCC-CEEEe
Confidence 988773333 2443 37777
No 479
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=92.17 E-value=0.37 Score=47.56 Aligned_cols=54 Identities=30% Similarity=0.445 Sum_probs=41.5
Q ss_pred ceEEEEccCccchHHHHHHHhhCCC--EEEEEeCCC----------------------------CCHhhhccCCCEEEEe
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHHA--TVSIVHALT----------------------------KNPEQITSEADIVIAA 282 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~gA--tVti~h~~t----------------------------~~L~~~~~~ADIVIsA 282 (368)
.+|.|+|+++.||..++..|+..|. +|+.+.+.. .+ .+.+++|||||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEe
Confidence 4799999866679999999998874 577776521 12 2458999999999
Q ss_pred cCCCC
Q 017679 283 AGVAN 287 (368)
Q Consensus 283 vG~p~ 287 (368)
+|.|.
T Consensus 80 ag~p~ 84 (309)
T cd05294 80 AGVPR 84 (309)
T ss_pred cCCCC
Confidence 99764
No 480
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=92.15 E-value=0.22 Score=56.90 Aligned_cols=88 Identities=14% Similarity=0.147 Sum_probs=52.6
Q ss_pred HhhhccCCCEEEEecC----CCCcccCC-C---cCCCc----EEEEeecCCC---CCCCCCCCCCCcEEE----------
Q 017679 269 PEQITSEADIVIAAAG----VANLVRGS-W---LKPGA----VVLDVGTCPV---DVSVDPSCEYGYRLM---------- 323 (368)
Q Consensus 269 L~~~~~~ADIVIsAvG----~p~~I~~e-~---ik~ga----vVIDvg~n~~---~~~~d~t~~~~~kl~---------- 323 (368)
+++++..||++|+++- .|.+|+.+ | +|+|. +|+||.+... +++..+|+..+ .+.
T Consensus 291 ~~~~~~~advlIn~i~~~~~~P~lvt~~~~~~~mk~G~~~l~vI~DVs~D~gG~ie~~~~~Tt~~~-P~~~~~~~~~~~~ 369 (1042)
T PLN02819 291 HEKIAPYASVIVNCMYWEKRFPRLLTTKQLQDLTRKGGCPLVGVCDITCDIGGSIEFLNKTTSIEK-PFFRYNPSNNSYH 369 (1042)
T ss_pred HHHhHhhCCEEEeeeecCCCCCceeCHHHHHHhhcCCCccceEEEEEccCCCCCeeecccCCCCcC-CeEeecccccccc
Confidence 4568899999999983 57789888 3 46787 9999997653 21111222111 121
Q ss_pred cccchhhhhccceEeccCCCcccHHHHHHHHHHHHHH
Q 017679 324 GDVCYEEAMRLASVITPVPGGVGPMTVAMLLSNTLDS 360 (368)
Q Consensus 324 GDVd~~~~~~~a~~iTPVPGGVGp~T~amLl~N~v~a 360 (368)
.+++.+.+ ..-++.-.|+-+ |.|...-+.|.+--
T Consensus 370 ~~~~~~gv--~~~~VdNlP~~l-Pr~AS~~f~n~llp 403 (1042)
T PLN02819 370 DDMDGDGI--LCMAVDILPTEF-AKEASQHFGNILSP 403 (1042)
T ss_pred cccCCCCe--EEEEECCccccC-HHHHHHHHHHHHHH
Confidence 11111111 133455677766 88888888876643
No 481
>PRK05086 malate dehydrogenase; Provisional
Probab=92.11 E-value=0.39 Score=47.58 Aligned_cols=55 Identities=27% Similarity=0.432 Sum_probs=39.6
Q ss_pred ceEEEEccCccchHHHHHHHhh-CC--CEEEEEeCC-----------------------CCCHhhhccCCCEEEEecCCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQR-HH--ATVSIVHAL-----------------------TKNPEQITSEADIVIAAAGVA 286 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~-~g--AtVti~h~~-----------------------t~~L~~~~~~ADIVIsAvG~p 286 (368)
+|++|||+++.||..++..|.. .+ ..++++.+. ..++.+.++++|+||.+.|.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 5899999966679999988844 33 356665421 124457788999999999975
Q ss_pred C
Q 017679 287 N 287 (368)
Q Consensus 287 ~ 287 (368)
+
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
No 482
>PLN02206 UDP-glucuronate decarboxylase
Probab=92.10 E-value=0.34 Score=50.20 Aligned_cols=37 Identities=24% Similarity=0.251 Sum_probs=32.8
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
..-++++|+|.|++|.||+.++..|+++|.+|.++.+
T Consensus 115 ~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~ 151 (442)
T PLN02206 115 LKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN 151 (442)
T ss_pred cccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC
Confidence 4457899999999999999999999999999988754
No 483
>PRK08303 short chain dehydrogenase; Provisional
Probab=92.09 E-value=0.23 Score=48.51 Aligned_cols=38 Identities=26% Similarity=0.218 Sum_probs=33.8
Q ss_pred CCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 228 VEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 228 i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+++||.++|.|++.-+|+.++..|+++|++|.++.++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 35789999999998778999999999999999998765
No 484
>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional
Probab=92.08 E-value=0.32 Score=49.46 Aligned_cols=71 Identities=20% Similarity=0.216 Sum_probs=51.3
Q ss_pred ceEEEEccCccchHHHHHHHhhCC-------CEEEEEeCC---------------------------------CCCHhhh
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH-------ATVSIVHAL---------------------------------TKNPEQI 272 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g-------AtVti~h~~---------------------------------t~~L~~~ 272 (368)
.+|+|||+|.. |.++|..|.+.| .+|++..++ +.++.+.
T Consensus 12 ~ki~ViGaG~w-GtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~ea 90 (365)
T PTZ00345 12 LKVSVIGSGNW-GSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKEA 90 (365)
T ss_pred CeEEEECCCHH-HHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHHH
Confidence 58999999887 999999999886 578876433 2356788
Q ss_pred ccCCCEEEEecCCCCc------ccCC-CcCCCcEEEEee
Q 017679 273 TSEADIVIAAAGVANL------VRGS-WLKPGAVVLDVG 304 (368)
Q Consensus 273 ~~~ADIVIsAvG~p~~------I~~e-~ik~gavVIDvg 304 (368)
+++||+||.|++...+ +.+- .+++++++|-+.
T Consensus 91 v~~aDiIvlAVPsq~l~~vl~~l~~~~~l~~~~~iIS~a 129 (365)
T PTZ00345 91 VEDADLLIFVIPHQFLESVLSQIKENNNLKKHARAISLT 129 (365)
T ss_pred HhcCCEEEEEcChHHHHHHHHHhccccccCCCCEEEEEe
Confidence 9999999999975332 2321 456666666553
No 485
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=92.05 E-value=0.24 Score=56.15 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=32.1
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
-.||+|+|||+|-+ |..+|..|.++|..|||..+.
T Consensus 304 ~~gkkVaVIGsGPA-GLsaA~~Lar~G~~VtVfE~~ 338 (944)
T PRK12779 304 AVKPPIAVVGSGPS-GLINAYLLAVEGFPVTVFEAF 338 (944)
T ss_pred CCCCeEEEECCCHH-HHHHHHHHHHCCCeEEEEeeC
Confidence 46999999999998 999999999999999999754
No 486
>PRK06180 short chain dehydrogenase; Provisional
Probab=92.04 E-value=0.18 Score=47.79 Aligned_cols=35 Identities=14% Similarity=-0.082 Sum_probs=31.9
Q ss_pred ccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 231 MGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 231 ~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
.+|+++|.|+++-+|+.++..|+++|++|+++.++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCC
Confidence 47899999999989999999999999999998875
No 487
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=92.04 E-value=0.32 Score=46.17 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=41.2
Q ss_pred ceEEEEccCccchHHHHHHHhhCC---CEEEEEeCCC---------------CCHhhhccCCCEEEEecCC
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRHH---ATVSIVHALT---------------KNPEQITSEADIVIAAAGV 285 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~g---AtVti~h~~t---------------~~L~~~~~~ADIVIsAvG~ 285 (368)
.++.|||.|.+ |..++..|.+.| ..|+++.++. .+..+.+.++|+||.++..
T Consensus 3 m~I~iIG~G~m-G~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNM-ASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHH-HHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 47999999876 999999999888 6788887752 2344567899999998853
No 488
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=92.03 E-value=0.25 Score=48.24 Aligned_cols=36 Identities=17% Similarity=0.045 Sum_probs=32.5
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
+++||+|+|.|+++.+|+.++..|+++|++|+++.+
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r 38 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR 38 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec
Confidence 578999999999999999999999999999987644
No 489
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=92.00 E-value=0.51 Score=45.59 Aligned_cols=94 Identities=15% Similarity=0.117 Sum_probs=60.3
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC-------------------------
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK------------------------- 267 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~------------------------- 267 (368)
||........+.....--.|++|+|.|.++.+|..++.++...|++|++..+...
T Consensus 128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 207 (341)
T cd08290 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRS 207 (341)
T ss_pred hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCccccc
Confidence 4444444444444333346899999998777899999999999998766554321
Q ss_pred -CHhhhcc-----CCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 268 -NPEQITS-----EADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 268 -~L~~~~~-----~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
+..+.++ ..|+|+.++|...+. -.+.++++..++++|..
T Consensus 208 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~ 253 (341)
T cd08290 208 LLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGM 253 (341)
T ss_pred ccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEecc
Confidence 1111111 368888888865432 23456788888888853
No 490
>PRK06128 oxidoreductase; Provisional
Probab=92.00 E-value=0.24 Score=47.78 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=32.3
Q ss_pred CCccceEEEEccCccchHHHHHHHhhCCCEEEEEeC
Q 017679 229 EIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHA 264 (368)
Q Consensus 229 ~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~ 264 (368)
.++||+++|.|+++-+|+.++..|+++|++|.++.+
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~ 87 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYL 87 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC
Confidence 478999999999888999999999999999987653
No 491
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=91.98 E-value=0.22 Score=49.83 Aligned_cols=75 Identities=20% Similarity=0.189 Sum_probs=50.8
Q ss_pred ceEEEEccCccchHHHHHHHhhC-CCEEEE-EeCCCC--C-------H-----------hh-hccCCCEEEEecCCCC--
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQRH-HATVSI-VHALTK--N-------P-----------EQ-ITSEADIVIAAAGVAN-- 287 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~~~-gAtVti-~h~~t~--~-------L-----------~~-~~~~ADIVIsAvG~p~-- 287 (368)
++|.|||++|.+|+-++.+|.++ +++++. +.+... . + .+ ...++|+|+.|++...
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~~~ 82 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGVSM 82 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHHHH
Confidence 58999999888899999999876 567544 432210 0 1 11 3357899999987422
Q ss_pred cccCCCcCCCcEEEEeecCC
Q 017679 288 LVRGSWLKPGAVVLDVGTCP 307 (368)
Q Consensus 288 ~I~~e~ik~gavVIDvg~n~ 307 (368)
-+-....+.|..|||.+...
T Consensus 83 ~~v~~a~~aG~~VID~S~~f 102 (343)
T PRK00436 83 DLAPQLLEAGVKVIDLSADF 102 (343)
T ss_pred HHHHHHHhCCCEEEECCccc
Confidence 13334556799999998654
No 492
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=91.97 E-value=0.34 Score=49.32 Aligned_cols=76 Identities=17% Similarity=0.184 Sum_probs=51.9
Q ss_pred ceEEEEccCccchHHHHHHHh-hCCC---EEEEEeCC-C--------------CCHhh--hccCCCEEEEecCCC--Ccc
Q 017679 233 KNAVVIGRSNIVGLPTSLLLQ-RHHA---TVSIVHAL-T--------------KNPEQ--ITSEADIVIAAAGVA--NLV 289 (368)
Q Consensus 233 K~VvVIG~g~~VGrpla~lL~-~~gA---tVti~h~~-t--------------~~L~~--~~~~ADIVIsAvG~p--~~I 289 (368)
|+|.|||+.|.||+-+..+|. +++. ++....+. . .++.+ ..++.||++.++|.- .-+
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~~~v~~~~~~~~~~~vDivffa~g~~~s~~~ 80 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDIDALKALDIIITCQGGDYTNEI 80 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCcceEEcCcccccccCCCEEEEcCCHHHHHHH
Confidence 579999999999999999888 5443 33333331 0 12322 467899999999753 123
Q ss_pred cCCCcCCC--cEEEEeecCCC
Q 017679 290 RGSWLKPG--AVVLDVGTCPV 308 (368)
Q Consensus 290 ~~e~ik~g--avVIDvg~n~~ 308 (368)
-+...+.| ++|||-.....
T Consensus 81 ~p~~~~aG~~~~VIDnSSa~R 101 (366)
T TIGR01745 81 YPKLRESGWQGYWIDAASSLR 101 (366)
T ss_pred HHHHHhCCCCeEEEECChhhh
Confidence 34455779 89999987653
No 493
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=91.96 E-value=0.26 Score=48.42 Aligned_cols=36 Identities=28% Similarity=0.159 Sum_probs=32.3
Q ss_pred CccceEEEEccCccchHHHHHHHhhCCCEEEEEeCC
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHAL 265 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~ 265 (368)
++||+++|.|+++.+|+.++..|+++|++|+++.++
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~ 37 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLD 37 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCC
Confidence 478999999998888999999999999999988654
No 494
>PRK07831 short chain dehydrogenase; Provisional
Probab=91.95 E-value=0.23 Score=46.35 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=31.5
Q ss_pred CCccceEEEEccCc-cchHHHHHHHhhCCCEEEEEeCCC
Q 017679 229 EIMGKNAVVIGRSN-IVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 229 ~l~GK~VvVIG~g~-~VGrpla~lL~~~gAtVti~h~~t 266 (368)
.++||+++|.|+++ -+|+.++..|+++|++|+++.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~ 52 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE 52 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH
Confidence 35789999999853 359999999999999999886643
No 495
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=91.94 E-value=0.12 Score=58.91 Aligned_cols=115 Identities=17% Similarity=0.215 Sum_probs=73.3
Q ss_pred CccceEEEEccCccchHHHHHHHhhCC-CE-------------EEEEeCCC-----------------------CCHhhh
Q 017679 230 IMGKNAVVIGRSNIVGLPTSLLLQRHH-AT-------------VSIVHALT-----------------------KNPEQI 272 (368)
Q Consensus 230 l~GK~VvVIG~g~~VGrpla~lL~~~g-At-------------Vti~h~~t-----------------------~~L~~~ 272 (368)
.+.|+|+|||+|.+ |++.+..|++.. +. |+++.... .++.+.
T Consensus 567 ~~~~rIlVLGAG~V-G~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGAGRV-CRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECCCHH-HHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 35789999999885 999999998753 34 88886431 124455
Q ss_pred ccCCCEEEEecCCC-Cc-ccCCCcCCCcEEEEeecCCCCCCCCCCCCCCcEEEcccchhhhhccceEeccCCC-cccHHH
Q 017679 273 TSEADIVIAAAGVA-NL-VRGSWLKPGAVVLDVGTCPVDVSVDPSCEYGYRLMGDVCYEEAMRLASVITPVPG-GVGPMT 349 (368)
Q Consensus 273 ~~~ADIVIsAvG~p-~~-I~~e~ik~gavVIDvg~n~~~~~~d~t~~~~~kl~GDVd~~~~~~~a~~iTPVPG-GVGp~T 349 (368)
++++|+||++++.. |. +-...++-|.-++|..+...+ . ..+. +.+ +.++. +=+++ |.-|--
T Consensus 646 v~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e-----~----~~L~-----e~A-k~AGV-~~m~e~GlDPGi 709 (1042)
T PLN02819 646 VSQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEE-----M----SALD-----SKA-KEAGI-TILCEMGLDPGI 709 (1042)
T ss_pred hcCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHH-----H----HHHH-----HHH-HHcCC-EEEECCccCHHH
Confidence 57899999999853 22 455667778778887643211 0 0111 333 34442 12222 467878
Q ss_pred HHHHHHHHHHHH
Q 017679 350 VAMLLSNTLDSA 361 (368)
Q Consensus 350 ~amLl~N~v~a~ 361 (368)
..|+..++++..
T Consensus 710 d~~lA~~~Id~~ 721 (1042)
T PLN02819 710 DHMMAMKMIDDA 721 (1042)
T ss_pred HHHHHHHHHHhh
Confidence 888888888765
No 496
>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional
Probab=91.93 E-value=0.93 Score=46.88 Aligned_cols=78 Identities=19% Similarity=0.299 Sum_probs=54.9
Q ss_pred hCCCCccceEEEEccC---------ccchHHHHHHHhhCCCEEEEEeCCCC--------C---Hhh-hccCCCEEEEecC
Q 017679 226 SGVEIMGKNAVVIGRS---------NIVGLPTSLLLQRHHATVSIVHALTK--------N---PEQ-ITSEADIVIAAAG 284 (368)
Q Consensus 226 ~~i~l~GK~VvVIG~g---------~~VGrpla~lL~~~gAtVti~h~~t~--------~---L~~-~~~~ADIVIsAvG 284 (368)
++.+++|++|.|+|-+ +.-+..++..|.++|++|.+..-.-. . +.. .++.||+||..|.
T Consensus 308 ~~~~~~~~~V~vlGlafK~~t~D~R~Spa~~ii~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~ 387 (425)
T PRK15182 308 KGINVEGSSVLILGFTFKENCPDIRNTRIIDVVKELGKYSCKVDIFDPWVDAEEVRREYGIIPVSEVKSSHYDAIIVAVG 387 (425)
T ss_pred cCCCCCCCEEEEEEeEeCCCCCccccCcHHHHHHHHHhCCCEEEEECCCCChhHHHHhcCcccchhhhhcCCCEEEEccC
Confidence 3567899999999932 23488999999999999998865410 0 112 3578999999999
Q ss_pred CCCc--ccCCCc----CCCcEEEEe
Q 017679 285 VANL--VRGSWL----KPGAVVLDV 303 (368)
Q Consensus 285 ~p~~--I~~e~i----k~gavVIDv 303 (368)
.+.| ++.+++ +...+|||.
T Consensus 388 h~~f~~~~~~~~~~~~~~~~~iiD~ 412 (425)
T PRK15182 388 HQQFKQMGSEDIRGFGKDKHVLYDL 412 (425)
T ss_pred CHHhhcCCHHHHHHhcCCCCEEEEC
Confidence 8887 333333 323588993
No 497
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=91.92 E-value=0.36 Score=46.26 Aligned_cols=94 Identities=17% Similarity=0.092 Sum_probs=59.2
Q ss_pred cCCHHHHHHHHHHhCCCCccceEEEEccCccchHHHHHHHhhCCCEEEEEeCCCC--------------------CHhh-
Q 017679 213 PCTPKGCIELLIRSGVEIMGKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALTK--------------------NPEQ- 271 (368)
Q Consensus 213 PcTa~gv~~lL~~~~i~l~GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t~--------------------~L~~- 271 (368)
+|.....+..+.+....-.|.+++|.|.++.+|..++.++.+.|+.|+.+.+... ++.+
T Consensus 127 ~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 206 (329)
T cd05288 127 GMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEA 206 (329)
T ss_pred ccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHH
Confidence 4444444555544444457899999997777899999999999998877654321 1111
Q ss_pred ---hc-cCCCEEEEecCCCCcc-cCCCcCCCcEEEEeecC
Q 017679 272 ---IT-SEADIVIAAAGVANLV-RGSWLKPGAVVLDVGTC 306 (368)
Q Consensus 272 ---~~-~~ADIVIsAvG~p~~I-~~e~ik~gavVIDvg~n 306 (368)
.. +..|+++.++|.+.+- .-+.++++..++.+|..
T Consensus 207 v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 207 LKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred HHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeec
Confidence 11 3478888877754221 12346677777788753
No 498
>PRK06483 dihydromonapterin reductase; Provisional
Probab=91.88 E-value=0.23 Score=45.60 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=31.6
Q ss_pred cceEEEEccCccchHHHHHHHhhCCCEEEEEeCCC
Q 017679 232 GKNAVVIGRSNIVGLPTSLLLQRHHATVSIVHALT 266 (368)
Q Consensus 232 GK~VvVIG~g~~VGrpla~lL~~~gAtVti~h~~t 266 (368)
+|+++|.|+++-+|+.++..|+++|++|+++.++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTH 36 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCc
Confidence 68899999988889999999999999999987764
No 499
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=91.83 E-value=0.36 Score=47.15 Aligned_cols=51 Identities=24% Similarity=0.404 Sum_probs=38.5
Q ss_pred EEEEccCccchHHHHHHHhhCCC-EEEEEeCCC--------------------------CCHhhhccCCCEEEEecCCCC
Q 017679 235 AVVIGRSNIVGLPTSLLLQRHHA-TVSIVHALT--------------------------KNPEQITSEADIVIAAAGVAN 287 (368)
Q Consensus 235 VvVIG~g~~VGrpla~lL~~~gA-tVti~h~~t--------------------------~~L~~~~~~ADIVIsAvG~p~ 287 (368)
|.|||+|. ||..++..|+.+|. +|+++.... .+. +.+++||+||.++|.|.
T Consensus 1 I~IIGaG~-vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGN-VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCH-HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecCCCC
Confidence 57899966 59999998887764 888886431 233 45899999999998653
No 500
>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=91.82 E-value=0.49 Score=48.58 Aligned_cols=123 Identities=22% Similarity=0.280 Sum_probs=71.4
Q ss_pred Ccc-ceEEEEccCccchHHHHHHHhhC--CCEEEEEeCCCCC-HhhhccCCCEEEEecC-CCCcccCCCcCCCcEEEEee
Q 017679 230 IMG-KNAVVIGRSNIVGLPTSLLLQRH--HATVSIVHALTKN-PEQITSEADIVIAAAG-VANLVRGSWLKPGAVVLDVG 304 (368)
Q Consensus 230 l~G-K~VvVIG~g~~VGrpla~lL~~~--gAtVti~h~~t~~-L~~~~~~ADIVIsAvG-~p~~I~~e~ik~gavVIDvg 304 (368)
+.| |+|.|+|.|+. |+..+.+|++. |+.|+++...... ..+.+++ .+-+..-+ .+..+. ..+.+|+--|
T Consensus 4 ~~~~~~v~viG~G~s-G~s~~~~l~~~~~~~~v~~~D~~~~~~~~~~l~~-g~~~~~g~~~~~~~~----~~d~vV~Spg 77 (438)
T PRK04663 4 WQGIKNVVVVGLGIT-GLSVVKHLRKYQPQLTVKVIDTRETPPGQEQLPE-DVELHSGGWNLEWLL----EADLVVTNPG 77 (438)
T ss_pred ccCCceEEEEeccHH-HHHHHHHHHhcCCCCeEEEEeCCCCchhHHHhhc-CCEEEeCCCChHHhc----cCCEEEECCC
Confidence 456 88999999998 99999999887 5889999865421 1122332 44332211 121121 1345666666
Q ss_pred cCCCCCCCCCCCCCCcEEEcccchhh-hhc-cceEeccCCCcccHHHHHHHHHHHHHHH
Q 017679 305 TCPVDVSVDPSCEYGYRLMGDVCYEE-AMR-LASVITPVPGGVGPMTVAMLLSNTLDSA 361 (368)
Q Consensus 305 ~n~~~~~~d~t~~~~~kl~GDVd~~~-~~~-~a~~iTPVPGGVGp~T~amLl~N~v~a~ 361 (368)
+++.......-.+.+-+++++.++-. ..+ +.- -|-|=-|.-|+..|+.++++.+
T Consensus 78 I~~~~p~~~~a~~~gi~i~~~~el~~~~~~~~~I---~VTGTnGKTTTt~ll~~iL~~~ 133 (438)
T PRK04663 78 IALATPEIQQVLAAGIPVVGDIELFAWAVDKPVI---AITGSNGKSTVTDLTGVMAKAA 133 (438)
T ss_pred CCCCCHHHHHHHHCCCcEEEHHHHHHhhcCCCEE---EEeCCCCHHHHHHHHHHHHHHC
Confidence 65532000000012346888887632 111 222 4557788999999999988754
Done!