Query 017680
Match_columns 368
No_of_seqs 225 out of 665
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 03:14:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qk9_A Mitochondrial import in 100.0 2.2E-58 7.4E-63 430.9 18.0 206 145-367 7-221 (222)
2 2cw9_A Translocase of inner mi 100.0 1.6E-47 5.6E-52 350.4 20.7 183 181-367 3-193 (194)
3 2f86_B Hypothetical protein K1 89.0 0.26 8.8E-06 42.0 3.3 110 230-365 12-134 (143)
4 3gzr_A Uncharacterized protein 88.8 5.8 0.0002 33.1 11.7 108 231-361 7-127 (146)
5 3soy_A NTF2-like superfamily p 88.3 3.2 0.00011 34.7 9.7 118 227-364 7-136 (145)
6 2ux0_A Calcium-calmodulin depe 87.9 9.5 0.00032 30.8 12.3 29 230-258 13-41 (143)
7 4hyz_A Uncharacterized protein 87.9 1.3 4.3E-05 36.4 6.7 96 217-321 5-110 (114)
8 3h51_A Putative calcium/calmod 87.6 3.3 0.00011 34.4 9.4 110 230-363 20-139 (156)
9 3f7s_A Uncharacterized NTF2-li 87.6 9.8 0.00034 30.6 12.2 28 231-258 9-36 (142)
10 4i4k_A Uncharacterized protein 85.9 10 0.00035 31.3 11.5 29 231-259 20-48 (143)
11 3fsd_A NTF2-like protein of un 85.3 5.6 0.00019 32.2 9.4 106 230-361 14-130 (134)
12 3gwr_A Putative calcium/calmod 85.0 9.6 0.00033 31.8 11.0 27 232-258 10-36 (144)
13 3bb9_A Putative orphan protein 83.2 10 0.00036 31.0 10.4 29 231-259 31-59 (148)
14 3hx8_A MLR2180 protein, putati 82.8 15 0.0005 28.4 14.0 110 230-365 6-127 (129)
15 2r4i_A Uncharacterized protein 81.5 10 0.00034 29.3 9.2 30 230-259 6-35 (123)
16 3cnx_A Uncharacterized protein 80.1 29 0.001 30.2 15.8 29 231-259 13-41 (170)
17 3ksp_A Calcium/calmodulin-depe 79.3 11 0.00037 31.5 9.0 99 239-362 18-124 (129)
18 3rob_A Uncharacterized conserv 79.2 26 0.00088 29.0 12.9 101 232-358 19-131 (139)
19 2kfe_A Meucin-24; alpha-helix, 75.4 2.4 8.3E-05 26.3 2.8 21 9-29 5-25 (26)
20 3ejv_A Uncharacterized protein 71.0 29 0.00099 29.9 10.0 117 231-360 27-169 (179)
21 3blz_A NTF2-like protein of un 70.7 18 0.00061 29.0 8.1 94 231-360 13-121 (128)
22 3duk_A NTF2-like protein of un 68.9 38 0.0013 27.4 9.7 90 232-358 14-118 (125)
23 2gxf_A Hypothetical protein YY 68.1 14 0.00048 29.9 6.9 110 231-364 4-124 (142)
24 3b7c_A Uncharacterized protein 67.0 30 0.001 27.2 8.6 29 231-259 6-36 (122)
25 3fka_A Uncharacterized NTF-2 l 60.4 63 0.0022 25.8 11.0 89 233-359 12-115 (120)
26 3d9r_A Ketosteroid isomerase-l 59.7 58 0.002 25.1 13.9 28 231-258 12-39 (135)
27 3f40_A Uncharacterized NTF2-li 58.4 44 0.0015 26.3 8.1 27 233-259 9-35 (114)
28 3ehc_A Snoal-like polyketide c 52.4 46 0.0016 26.0 7.2 28 232-259 5-32 (128)
29 3en8_A Uncharacterized NTF-2 l 49.7 97 0.0033 24.7 9.5 29 231-259 6-34 (128)
30 2gey_A ACLR protein; alpha+bet 44.6 1E+02 0.0036 25.0 8.5 28 231-258 5-32 (158)
31 3dmc_A NTF2-like protein; stru 43.7 6.2 0.00021 32.3 0.7 32 228-259 10-41 (134)
32 3cu3_A Domain of unknown funct 43.6 1.4E+02 0.0047 24.6 11.2 29 230-258 16-44 (172)
33 3b8l_A Uncharacterized protein 42.8 1.3E+02 0.0046 24.3 9.9 28 231-258 29-57 (163)
34 2chc_A Protein RV3472; hypothe 41.6 1.4E+02 0.0049 24.3 11.2 27 232-258 16-42 (170)
35 3g0k_A Putative membrane prote 40.1 65 0.0022 26.6 6.5 30 230-259 27-57 (148)
36 2rcd_A Uncharacterized protein 38.0 1.4E+02 0.0049 23.3 11.4 30 229-258 13-42 (129)
37 2gex_A SNOL; alpha+beta barrel 30.0 2.1E+02 0.0072 22.8 10.0 27 232-258 6-32 (152)
38 3us6_A Histidine-containing ph 28.0 26 0.00089 29.9 2.0 55 202-256 16-79 (153)
39 2owp_A Hypothetical protein BX 27.9 2.4E+02 0.0081 22.7 11.7 37 224-260 5-41 (129)
40 3fgy_A Uncharacterized NTF2-li 26.4 31 0.0011 27.1 2.1 28 232-259 7-34 (135)
41 1ohp_A Steroid delta-isomerase 26.0 31 0.0011 25.9 2.0 29 231-259 6-34 (125)
42 3ec9_A Uncharacterized NTF2-li 25.1 21 0.00073 28.4 0.9 27 233-259 15-41 (140)
43 2rfr_A Uncharacterized protein 24.9 2.6E+02 0.0088 22.1 9.6 28 231-258 20-47 (155)
44 1nww_A Limonene-1,2-epoxide hy 23.6 35 0.0012 27.3 2.0 27 233-259 25-51 (149)
45 1oh0_A Steroid delta-isomerase 23.5 37 0.0013 26.2 2.1 29 231-259 8-36 (131)
46 3h3h_A Uncharacterized snoal-l 23.3 30 0.001 27.1 1.4 28 231-258 9-36 (122)
47 3i0y_A Putative polyketide cyc 23.1 34 0.0012 26.9 1.8 28 232-259 10-37 (140)
48 1tuh_A BAL32A, hypothetical pr 23.0 37 0.0013 27.6 2.1 28 231-258 30-57 (156)
49 3f7x_A Putative polyketide cyc 22.8 26 0.00088 28.9 1.0 28 233-260 23-50 (151)
50 3f9s_A Putative polyketide cyc 22.7 1.3E+02 0.0044 23.9 5.3 28 233-260 9-37 (146)
51 2r25_A Phosphorelay intermedia 22.4 40 0.0014 29.6 2.2 55 221-275 25-93 (167)
52 1yvi_A Histidine-containing ph 22.4 39 0.0013 28.3 2.1 42 213-254 27-78 (149)
53 3ebt_A Uncharacterized NTF2-li 22.0 36 0.0012 26.5 1.7 28 232-259 5-32 (132)
54 3dm8_A Uncharacterized protein 20.9 22 0.00076 28.9 0.2 27 233-259 7-33 (143)
55 2bng_A MB2760; epoxide hydrola 20.8 47 0.0016 26.8 2.2 28 232-259 17-44 (149)
56 3fh1_A Uncharacterized NTF2-li 20.7 33 0.0011 27.1 1.2 28 232-259 19-46 (129)
57 1s5a_A Hypothetical protein YE 20.6 34 0.0012 27.2 1.3 28 232-259 12-39 (150)
58 3soa_A Calcium/calmodulin-depe 20.4 4.7E+02 0.016 25.2 9.8 110 230-365 318-443 (444)
No 1
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=100.00 E-value=2.2e-58 Score=430.90 Aligned_cols=206 Identities=27% Similarity=0.527 Sum_probs=162.2
Q ss_pred hhhHH-HHHhhcCCccccccccccCccccccccchHHhhhh-hcccccchhhhhhhcccc---ccccChHHHHHHHHHhc
Q 017680 145 SMWSK-LKEKMQGYPVFKRITGISEPVVTKGQEIAEDVRER-WETSDNPIVHKIQDMNET---IFQETDAAASIKEIRRR 219 (368)
Q Consensus 145 s~w~~-~k~~~~~~p~~~~~~~~~~p~~~k~~e~~~d~r~~-~eeSdnP~v~~~~di~d~---lf~ete~a~~l~eIk~~ 219 (368)
.+|++ |++|+++||++++|+ |||++ |||||||+|+++|+|+|+ ||++|+++++|++|+++
T Consensus 7 ~~~~~~w~~fk~~~~~~~~~~---------------~~k~~~~~es~np~i~~~r~itd~v~~~f~~te~a~~l~~Ik~~ 71 (222)
T 3qk9_A 7 ESFGKKVEDFKEKTVVGRSIQ---------------SLKNKLWDESENPLIVVMRKITNKVGGFFAETESSRVYSQFKLM 71 (222)
T ss_dssp --------------------C---------------HHHHHHHHHCCCHHHHHHHHHCC---------CCHHHHTTCC--
T ss_pred hHHHHHHHHHhhcCHHHHHHH---------------HHHhhhcccccCHHHHHHHHHHHhcccccCCCHHHHHHHHHHHh
Confidence 38998 999999999999999 99999 999999999999999984 89999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHH-HHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeC--
Q 017680 220 DPSFSLPDFVSEVQEAIRP-VLSAYMKGDVETLKKYCSPEVIERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMG-- 296 (368)
Q Consensus 220 DP~Fd~~~Fl~~ar~~~~p-IleA~~~GDle~Lk~~cse~~y~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~-- 296 (368)
||+||+++|+++|+++|+| ||+||.+||++.||+||++++|+.|+++|++|+++|+++++++|+|++++|+++++++
T Consensus 72 DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d~~il~I~~vdI~~a~~~~~~ 151 (222)
T 3qk9_A 72 DPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGRILDIRGVEIVSAKLLAPQ 151 (222)
T ss_dssp ---CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEECCEEEEEEEEEEEEEEECSSS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEeeeeEeeecceEEEEEEEecCC
Confidence 9999999999999999887 9999999999999999999999999999999999999999999999999999999995
Q ss_pred CeeEEEEEEEEeEEEEEEc-CCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeeccccccC
Q 017680 297 SSPIIIVAFQTQQIYCVRD-KHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQAL 367 (368)
Q Consensus 297 ~~pvitV~F~aQqI~~vRD-k~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~~a~ 367 (368)
+.|+|+|+|++|||+|+|| ++|+||+|+|++|.++.|+|+|+| ++++++ +..+|+|+|++|||.|+.+.
T Consensus 152 ~~p~itV~f~aq~i~~~rd~k~GeVVeGd~d~i~~~~~~WtF~R-~~~~~d-~~~tp~WkL~eiq~~~~~~~ 221 (222)
T 3qk9_A 152 DIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTR-DPEQID-DDETEGWKILEFVRGGSRQF 221 (222)
T ss_dssp CCEEEEEEEEEEEECCEEESTTCCCSSSCTTCCEEEEEEEEEEE-CCC---------CEEEEEEECCCCSCC
T ss_pred CceEEEEEEEEEEEEEEEeCCCCccccCCCCCceEEEEEEEEEE-cCccCC-CCCCCCcEEehhhccccccc
Confidence 7999999999999999999 999999999999999999999966 565544 23358999999999998654
No 2
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=100.00 E-value=1.6e-47 Score=350.41 Aligned_cols=183 Identities=27% Similarity=0.560 Sum_probs=161.8
Q ss_pred hhhhhcccccchhh-------hhhhccccccccChHHHHHHHHHhcCCCCChhhHHHHHHHH-HHHHHHHHHcCCHHHHH
Q 017680 181 VRERWETSDNPIVH-------KIQDMNETIFQETDAAASIKEIRRRDPSFSLPDFVSEVQEA-IRPVLSAYMKGDVETLK 252 (368)
Q Consensus 181 ~r~~~eeSdnP~v~-------~~~di~d~lf~ete~a~~l~eIk~~DP~Fd~~~Fl~~ar~~-~~pIleA~~~GDle~Lk 252 (368)
.+++|||||||+|+ +++|++++||++++.+.+|++|+++||+||+++|+++|+.+ |.+||+||.+||++.|+
T Consensus 3 ~~~~~~~s~n~~v~~~r~~~~~~~~~~~~~f~~s~~~~~l~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr 82 (194)
T 2cw9_A 3 SGSSGDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILK 82 (194)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHH
T ss_pred ccccccCCCCceEEeehhhhhhhhhhhccccCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 57889999999995 77888999999999999999999999999999999999999 68899999999999999
Q ss_pred hhcCHHHHHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEE
Q 017680 253 KYCSPEVIERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVY 332 (368)
Q Consensus 253 ~~cse~~y~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~~~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~ 332 (368)
+||||++|+.|+++|++|..+|+++++++|+|++++|++++++++.|+++|+|++|||+|+||++|+||+|+|+.+..+.
T Consensus 83 ~~~t~~~~~~~~~~i~~r~~~g~~~~~~~v~i~~~el~~a~~~~~~~~itV~f~~~~i~~~rd~~G~vveG~~~~~~~v~ 162 (194)
T 2cw9_A 83 DWCYEATYSQLAHPIQQAKALGLQFHSRILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML 162 (194)
T ss_dssp HHBCHHHHHHHHHHHHHHHHTTCEECCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHCCCccccEEEEecccEEEEEEEeCCeeEEEEEEEEEEEEEEECCCCCEecCCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEecccccCCCCCCCCeEEeeeeccccccC
Q 017680 333 YAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQAL 367 (368)
Q Consensus 333 yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~~a~ 367 (368)
|+|+|+|+ ....+| +++|+|++|||+++.-+
T Consensus 163 e~W~f~R~-~~~~~p---~~~W~L~~iq~~~~~~~ 193 (194)
T 2cw9_A 163 YVWALCRD-QDELNP---YAAWRLLDISASSTEQI 193 (194)
T ss_dssp EEEEEEEC-TTCSCG---GGCEEEEEEEEEECTTC
T ss_pred EEEEEEEe-CCCCCC---CCCEEEEEEcccccccc
Confidence 99999874 332221 23599999999987654
No 3
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=88.99 E-value=0.26 Score=41.95 Aligned_cols=110 Identities=14% Similarity=0.195 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHH--HHH-----HHHHHHHhCCCccc---ce--EEEecceeEEEEEEeC-
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIE--RCK-----AEHTAYQSHGIFFD---NR--ILHVSEVEVRETKMMG- 296 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~y~--~~~-----~~i~~r~~~G~~~d---~k--iL~I~~veL~~ak~~~- 296 (368)
+....+...+++|+.+||.+.+..+|+|++-- -.. .-+...+. + ++ .+ ...+.+. .+.+.+
T Consensus 12 ~eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~--~-f~~~~~~~~~~~~~~~---~V~~~g~ 85 (143)
T 2f86_B 12 QDIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRF--Y-FDGNRKNQVHTTMLNP---NVHIIGE 85 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHT--T-SSSCSCCSCEEEEEEE---EEEEETT
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHH--H-HhcccCCcceeEEEcc---eEEEeCC
Confidence 34455566689999999999999888876532 110 01122110 0 11 11 1122221 333456
Q ss_pred CeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeeccccc
Q 017680 297 SSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQ 365 (368)
Q Consensus 297 ~~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~~ 365 (368)
+.++++-...++ ..+.+|+.+.+. .+.+.+| ++. ..+|+++-.+..+..
T Consensus 86 d~Av~~y~~~~~----~~~~~G~~~~~~----~r~T~V~--~k~----------~g~WkivH~H~S~~~ 134 (143)
T 2f86_B 86 DAACVAYVKLTQ----FLDRNGEAHTRQ----SQESRVW--SKK----------QGRWVCVHVHRSTQP 134 (143)
T ss_dssp TEEEEEEEEEEE----EECTTSCEEEEE----EEEEEEE--EEE----------TTEEEEEEEEEEC--
T ss_pred CEEEEEEEeeee----eccCCCCeeeEE----EEEEEEE--EEe----------CCcEEEEEEeECCCC
Confidence 677777555555 445456544431 2444444 443 256999999876653
No 4
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=88.75 E-value=5.8 Score=33.12 Aligned_cols=108 Identities=13% Similarity=0.156 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHH------------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEE-eCC
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEVI------------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKM-MGS 297 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~y------------~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~-~~~ 297 (368)
..++.+.....||.+||.+.|..+++|++- ..+.+-+..+-..... .+. +.+ .+..+.+ .++
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~G~~~~Gr~aI~~~~~~~~~~~~~-~~~-~~~---~~~~i~~~~~D 81 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVVGMHWRGRDQIVFAHTAFLKTIFK-DCK-QEL---VTIEARTIAPG 81 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTTCCEEESHHHHHHHHHHHHHTTTT-TCC-EEE---EEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCCCCeeeCHHHHHHHHHHHhhcccC-CCE-EEE---eEEEEEEcCCC
Confidence 345666668899999999999998877651 2233333333222111 122 222 2233332 356
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeec
Q 017680 298 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQ 361 (368)
Q Consensus 298 ~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq 361 (368)
.+.+..+|.-.- .....|..+ | ..+..+.|+|+|. ..+|+|+..+-
T Consensus 82 ~A~v~~~~~l~g---~~~~~G~~~---~--~~~~~~t~v~vr~----------dg~WrI~a~h~ 127 (146)
T 3gzr_A 82 SALAVVTLIQDA---YVTPDGRQM---P--RAHDRLTLLAVER----------EGVWRFIHGHN 127 (146)
T ss_dssp EEEEEEEEEECC---EECTTCCEE---C--CEEEEEEEEEEEE----------TTEEEEEEEEE
T ss_pred EEEEEEEEEecc---eeCCCCCcC---C--ccCcEEEEEEEEE----------CCEEEEEEEec
Confidence 777766654321 123344322 1 1345677888774 25799998764
No 5
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=88.29 E-value=3.2 Score=34.73 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHH---------HHHH-HHHHhCCC--cccceEEEecceeEEEEEE
Q 017680 227 DFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERC---------KAEH-TAYQSHGI--FFDNRILHVSEVEVRETKM 294 (368)
Q Consensus 227 ~Fl~~ar~~~~pIleA~~~GDle~Lk~~cse~~y~~~---------~~~i-~~r~~~G~--~~d~kiL~I~~veL~~ak~ 294 (368)
+=+.+.+.++.....|+..||++.|..++.++..-.| ..++ ..+..... .+...-+.+.+.++ +.+
T Consensus 7 ~~~~ei~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--I~v 84 (145)
T 3soy_A 7 TVKQEITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPRGHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPA--IHV 84 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETTEEEESHHHHHHHCCCCCCCCTEEEEEEEESSCCE--EEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCCCcccCHHHHHHHHHHhhhhccccccceEEeeeeE--EEE
Confidence 3345666777778899999999999999866521111 2333 22221111 12233344544442 244
Q ss_pred eCCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeecccc
Q 017680 295 MGSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGV 364 (368)
Q Consensus 295 ~~~~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~ 364 (368)
.++.++++..+.... ....+|+.+.+ ...|.-+|+|.. +.+|||+..+-.++
T Consensus 85 ~gd~A~v~~~~~~~~---~~~~~G~~~~~------~~r~T~V~~r~~---------~ggWkIvh~H~S~~ 136 (145)
T 3soy_A 85 YGNAAVAEFDWHFTA---VRRDNGQTQHT------TGRESQVWAKIP---------NTGWRIVHVHYSGP 136 (145)
T ss_dssp ETTEEEEEEEEEEEE---EETTTCCEEEE------EEEEEEEEEEET---------TTEEEEEEEEEECC
T ss_pred cCCEEEEEEEEEEEE---EEcCCCCeeee------EEEEEEEEEEcC---------CCCEEEEEEecCCC
Confidence 577766654432221 11224544433 344555555521 36799999876543
No 6
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=87.86 E-value=9.5 Score=30.75 Aligned_cols=29 Identities=28% Similarity=0.542 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
+..+.......+||.+||.+.|..+++++
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 35566666789999999999999988877
No 7
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=87.85 E-value=1.3 Score=36.40 Aligned_cols=96 Identities=8% Similarity=0.003 Sum_probs=57.5
Q ss_pred HhcCCCCChhhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHH----HHHHhCCCcccceEEEecceeEEEE
Q 017680 217 RRRDPSFSLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVIERCKAEH----TAYQSHGIFFDNRILHVSEVEVRET 292 (368)
Q Consensus 217 k~~DP~Fd~~~Fl~~ar~~~~pIleA~~~GDle~Lk~~cse~~y~~~~~~i----~~r~~~G~~~d~kiL~I~~veL~~a 292 (368)
+.++..||.+.-.+.|++ +++-+..||.+.++.+|++.+-+.+..+. .+... --..+..+.++.+...
T Consensus 5 ~~l~~~fde~~v~~~A~~----~I~~l~~~dy~~i~~~~~~~lk~~Lt~e~l~~~~~~~~----~~G~f~s~~~~~~~~~ 76 (114)
T 4hyz_A 5 KELPEGFDKETVRKQAME----DIEIAQSKDYESWKSRFTKDLQSSLTEESYDSYLKILE----KQGEFKEFGKCTYLGQ 76 (114)
T ss_dssp SSCCTTCCHHHHHHHHHH----HHHHHHTTCHHHHHTTBCHHHHTTCCHHHHHHHHHHHH----TTCSEEEEEEEEEEEE
T ss_pred hcCChhhhHHHHHHHHHH----HHHHHHhCCHHHHHHHhCHHHHhhCCHHHHHHHHHHHH----hcCCceeeeceeeeee
Confidence 567899999988777775 45566679999999999999855443332 22111 1346777777776554
Q ss_pred EEeCCeeEEEEEEEEe------EEEEEEcCCCCee
Q 017680 293 KMMGSSPIIIVAFQTQ------QIYCVRDKHGTIT 321 (368)
Q Consensus 293 k~~~~~pvitV~F~aQ------qI~~vRDk~GeVV 321 (368)
. .++....+|-+.+. ...++.|++|+|+
T Consensus 77 ~-~~~~~y~vv~~~~~ye~~~~~f~i~Fd~d~kl~ 110 (114)
T 4hyz_A 77 I-KDNKKYGGVIIVVKYEEGNVNYSLAYDEDMNLV 110 (114)
T ss_dssp E-ETTEEEEEEEEEEEETTEEEEEEEEECTTSCEE
T ss_pred c-cCCCceEEEEEEEEEeccceEEEEEECCCCcEe
Confidence 3 33433333333332 2334445555543
No 8
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=87.61 E-value=3.3 Score=34.43 Aligned_cols=110 Identities=12% Similarity=0.176 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHH-------H--HHHHHHHHhCCCcccce-EEEecceeEEEEEEeCCee
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIER-------C--KAEHTAYQSHGIFFDNR-ILHVSEVEVRETKMMGSSP 299 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~y~~-------~--~~~i~~r~~~G~~~d~k-iL~I~~veL~~ak~~~~~p 299 (368)
...+..+....+||..||.+.|..++++++.-. + ...|.++-...+..... .+.++.+++ ..++.+
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~~~~~~i~~~~i~~----~~gd~A 95 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPKGVINYRTVRL----LDDDSA 95 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGGCCEEEEEEEEEEE----CSSSEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhhCCCCcccceEEEE----ecCCeE
Confidence 345666666888999999999999887654100 0 12333332221111111 223333332 135666
Q ss_pred EEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeeccc
Q 017680 300 IIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLG 363 (368)
Q Consensus 300 vitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g 363 (368)
+++..+... ..+.+|+.+ .....|..+|+|. +..|+|+..+-..
T Consensus 96 ~~~~~~~~~----~~~~~G~~~------~~~~r~t~v~~r~----------dG~WkIv~~H~S~ 139 (156)
T 3h51_A 96 VDAGVYTFT----LTDKNGKKS------DVQARYTFVYEKR----------DGKWLIINHHSSA 139 (156)
T ss_dssp EEEEEEEEE----EECTTSCEE------EEEEEEEEEEEEE----------TTEEEEEEEEEEE
T ss_pred EEEEEEEEE----EEcCCCCeE------EEEeEEEEEEEEE----------CCEEEEEEEeecC
Confidence 666555443 334445322 2346777777664 3579999876543
No 9
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=87.56 E-value=9.8 Score=30.61 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
..+..+....+||.+||.+.|..+++++
T Consensus 9 ~I~~l~~~~~~A~~~~D~~~~~~l~a~D 36 (142)
T 3f7s_A 9 EIRQLIERWMQAVRDRDIPGIIAPYADD 36 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 3455566678899999999999988875
No 10
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=85.95 E-value=10 Score=31.25 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
..++.+.....||..||.+.|..+++|+.
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da 48 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDG 48 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCc
Confidence 44556666889999999999999877664
No 11
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=85.25 E-value=5.6 Score=32.19 Aligned_cols=106 Identities=13% Similarity=0.215 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHH--------HHHHHHHHHhCCCcccceEEEecceeEEEEEEeCC-eeE
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVIER--------CKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGS-SPI 300 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~y~~--------~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~~-~pv 300 (368)
+...+++....+|+.+||.+.|..+|+|++.-. -..-+..... |. .+...+ .+.-..+...++ .++
T Consensus 14 ~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~G~~~~~~~~l~~~~~-g~---~~~~~~-~~~~~~v~~~g~d~Av 88 (134)
T 3fsd_A 14 DDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRA-GL---LKLSRL-DLSDAVVRAAGEDGRV 88 (134)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTTSCEECHHHHHHHHHT-TC---EEEEEE-EEEEEEEEESSTTEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCCCcCccHHHHHHHHHc-CC---ceEEEE-EEeccEEEEeCCCEEE
Confidence 345667777899999999999999998764311 1223444332 31 122222 233344555666 777
Q ss_pred EEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCC--eEEeeeec
Q 017680 301 IIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPI--WKLREMQQ 361 (368)
Q Consensus 301 itV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~--WrL~eiqq 361 (368)
++.++... . ...|....| ..+.+.+|. |. ..+ |||+..|.
T Consensus 89 v~~~~~~~----~-~~~g~~~~~----~~~~t~vw~--k~----------~g~~gWriv~~h~ 130 (134)
T 3fsd_A 89 VVVRAVTA----G-VYDGEAFTE----TLRFTRIWR--RT----------QGPAGWKLVAGHC 130 (134)
T ss_dssp EEEEEEEE----E-EETTEEEEE----EEEEEEEEE--EE----------TTTTEEEEEEEEE
T ss_pred EEEEEEEE----E-EeCCcEEEE----EEEEEEEEE--EC----------CCCccceEeEeEE
Confidence 77766543 1 113322221 235667774 43 246 99998775
No 12
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=84.97 E-value=9.6 Score=31.79 Aligned_cols=27 Identities=7% Similarity=0.146 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.+++.....+||.+||++.|..+.+++
T Consensus 10 ~~~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 10 PEAAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 344455578899999999999877665
No 13
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=83.23 E-value=10 Score=30.96 Aligned_cols=29 Identities=10% Similarity=0.227 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.+++.+....+||..||.+.|..+++|++
T Consensus 31 ~i~~~~~~~~~A~~~~D~~~l~~l~a~Da 59 (148)
T 3bb9_A 31 AAGNVVKQFHAALQMGNEAIVRQSLAANV 59 (148)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCe
Confidence 44556666788999999999999888874
No 14
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=82.77 E-value=15 Score=28.42 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHH------------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCC
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVI------------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGS 297 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~y------------~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~~ 297 (368)
...+..+.....||.+||++.|..+++|++. +.+.+-....-..|. .-+.+. ...+...++
T Consensus 6 ~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~~~~~~G~~~i~~~~~~~~~~~~----~~~~~~---~~~v~~~gd 78 (129)
T 3hx8_A 6 EAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMDMGI----SELKLT---TLDVQESGD 78 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTSCCEESHHHHHHHHHHHHHTTC----EEEEEE---EEEEEEETT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCCCCcccCHHHHHHHHHHHHhCCC----ceEEEE---EEEEEcCCC
Confidence 4455666668899999999999998876531 222232333222231 122232 333345677
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeeccccc
Q 017680 298 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQ 365 (368)
Q Consensus 298 ~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~~ 365 (368)
.++++.++... ....+|+.+. ....|..+|++.. +..|+++--.-+..+
T Consensus 79 ~A~~~~~~~~~----~~~~~G~~~~------~~g~~~~v~~r~~---------dG~W~i~~~~~~~~~ 127 (129)
T 3hx8_A 79 FAFESGSFSLK----APGKDSKLVD------AAGKYVVVWRKGQ---------DGGWKLYRDIWNSDP 127 (129)
T ss_dssp EEEEEEEEEEE----EECTTSCEEE------EEEEEEEEEEECT---------TSCEEEEEEEEEECC
T ss_pred EEEEEEEEEEE----eeCCCCCeee------eeEEEEEEEEECC---------CCcEEEEEeeccccc
Confidence 77777666654 2334453221 2456777776530 257999876554443
No 15
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=81.54 E-value=10 Score=29.28 Aligned_cols=30 Identities=20% Similarity=0.342 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
+..........+|+.+||.+.|..+|+|++
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~ 35 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDL 35 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCe
Confidence 445556666889999999999999998763
No 16
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=80.11 E-value=29 Score=30.15 Aligned_cols=29 Identities=28% Similarity=0.260 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
..+.+.....+||.+||++.|..+.+++.
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~ 41 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPA 41 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCc
Confidence 34455556789999999999998666664
No 17
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=79.30 E-value=11 Score=31.53 Aligned_cols=99 Identities=9% Similarity=0.030 Sum_probs=57.1
Q ss_pred HHHHHHcCCHHHHHhhcCHHHHHH--------HHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeEEEEEEEEeEE
Q 017680 239 VLSAYMKGDVETLKKYCSPEVIER--------CKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPIIIVAFQTQQI 310 (368)
Q Consensus 239 IleA~~~GDle~Lk~~cse~~y~~--------~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~~~pvitV~F~aQqI 310 (368)
-..|..+||.+.|..+++++.... -..-|......|.. ....++..+ ..+.+.++.++++.+....-
T Consensus 18 ~~~A~~~~D~~~L~~LL~ddf~~v~~sG~~~~K~~~L~~~~~~~~~-~~~~~~~~~---~~vr~~gd~AvVt~~~~~~~- 92 (129)
T 3ksp_A 18 RHAYLMEGNREAMHQLLSSDFSFIDGQGRQFDAETYLDHYVDPDQI-QWSNQISES---MVVEVFETTALVQEIVEDHF- 92 (129)
T ss_dssp HHHHHHHTCHHHHHHHEEEEEEEECTTCCEECHHHHHHHHSCTTTE-EEEEEEEEE---EEEEECSSEEEEEEEEEEEE-
T ss_pred HHHHHHhCCHHHHHhhcCCCEEEECCCCCCcCHHHHHHHhccCCCc-cceeecccc---eeEEEECCEEEEEEEEEEEE-
Confidence 667889999999999998875421 13334433333321 122222222 24556678777777655541
Q ss_pred EEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeecc
Q 017680 311 YCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQL 362 (368)
Q Consensus 311 ~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~ 362 (368)
. -.|+.+.|. -++..+|.. . ..+|+|+.-|--
T Consensus 93 --~--~~g~~~~~~----~~~t~VW~~--~----------~g~Wrlva~q~T 124 (129)
T 3ksp_A 93 --S--YGRSMYIGR----FRSVSLYHW--A----------NEGWKWHFHQLT 124 (129)
T ss_dssp --E--ETTEEEEEE----EEEEEEEEE--E----------TTEEEEEEEEEE
T ss_pred --e--cCCeEEeEE----EEEEEEEEE--e----------CCeeEEEEEeeE
Confidence 1 134433332 467888843 2 367999987753
No 18
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=79.21 E-value=26 Score=28.99 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHHH-----------HHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeCCeeE
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEVI-----------ERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMGSSPI 300 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~y-----------~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~~~pv 300 (368)
.++.+.....|+..||.+.|..+++|++. ..|.+.... +.. .-.+.+ ..++..+.+.++.++
T Consensus 19 I~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~~~~Gr~ai~a~~~~----~~~--~~~~~~-~~~~~~i~v~GD~A~ 91 (139)
T 3rob_A 19 IRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRLPFGKEEFLAACEQ----NDQ--RVIIEA-SATFEEIVIVEPMAY 91 (139)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTSCCBCHHHHHHHHHH----HHH--HEEEEE-EEEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCCCccCHHHHHHHHHH----HHH--hcCCCC-ceEEEEEEEcCCeEE
Confidence 34455557788999999999987776543 111111111 111 011222 344555566788777
Q ss_pred EEEEEEEeEEEEEEcC-CCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEee
Q 017680 301 IIVAFQTQQIYCVRDK-HGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLRE 358 (368)
Q Consensus 301 itV~F~aQqI~~vRDk-~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~e 358 (368)
+.-.++.. .+++ .|. .......++++|+|.. +..|+|.-
T Consensus 92 ~~~~~~~~----~t~~~~g~------~~~~~g~~~~v~rK~~---------dG~W~i~~ 131 (139)
T 3rob_A 92 TRTHLHIK----VTPRSGGA------VRELAGHAMSIFRRSM---------FGEWQLAR 131 (139)
T ss_dssp EEEEEEEE----EEETTSCC------CEEEEEEEEEEEEECT---------TSCEEEEE
T ss_pred EEEEEEEE----EecCCCCc------eeEeeccEEEEEEECC---------CCcEEEEE
Confidence 77666654 4443 332 2223556888996621 46799864
No 19
>2kfe_A Meucin-24; alpha-helix, antimicrobial protein; NMR {Synthetic}
Probab=75.41 E-value=2.4 Score=26.34 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhh
Q 017680 9 KVSASMKEKISAATEEVKGTF 29 (368)
Q Consensus 9 k~s~~~k~k~~~~~~~~~e~~ 29 (368)
.+-.+||+||++++++||.+.
T Consensus 5 ei~~kiK~kl~~akdK~k~~w 25 (26)
T 2kfe_A 5 EFMSNLKEKLSGVKEKMKNSX 25 (26)
T ss_dssp HHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHccC
Confidence 456789999999999999764
No 20
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=70.97 E-value=29 Score=29.90 Aligned_cols=117 Identities=14% Similarity=0.130 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHH----------------HHHHHHHHhCCCc----ccceEEEecceeEE
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEVIERC----------------KAEHTAYQSHGIF----FDNRILHVSEVEVR 290 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~y~~~----------------~~~i~~r~~~G~~----~d~kiL~I~~veL~ 290 (368)
..++.+..-..|+..+|.+.+..+++|++.=.+ ..+|.+.-...+. .....-.+.+..|
T Consensus 27 ~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~~~~~~~t~H~~~n~~I- 105 (179)
T 3ejv_A 27 IILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAPHGYRAWSQNVVNAPII- 105 (179)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCCCCTTEEEEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcccccccceEEEcCCCEE-
Confidence 344455556688899999999998888653111 3445554332221 1222222334433
Q ss_pred EEEEeCCeeEEEEEEEEeEEEEEEcCCCC---eecCCC---CceeEEEEEEEEEEecccccCCCCCCCCeEEeeee
Q 017680 291 ETKMMGSSPIIIVAFQTQQIYCVRDKHGT---ITEGGK---DTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQ 360 (368)
Q Consensus 291 ~ak~~~~~pvitV~F~aQqI~~vRDk~Ge---VVeGd~---d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiq 360 (368)
.+.++.+.++++..........+.+|. ++-|.- .-+..-.|.-.|+|. ..+||+....
T Consensus 106 --~vdgD~A~~~~~~y~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~g~Y~D~~~R~----------dg~Wri~~r~ 169 (179)
T 3ejv_A 106 --VIEGDHAVLDAQFMVFSILAAEVPDGGWPTGTFGAQGRIVPIEAGQYRLTLRTV----------ADGWVISAMR 169 (179)
T ss_dssp --EEETTEEEEEEEEEEEEEEECCCCTTCCCTTCCSCCEEEEEEEEEEEEEEEEEE----------TTEEEEEEEE
T ss_pred --EEcCCeeEEEEEEEEEEEEeeccCCCCCcceeecccccccccccceEEEEEEEE----------CCeEEEEEEE
Confidence 346777755666655544443332331 111111 123344588888775 2569998864
No 21
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=70.75 E-value=18 Score=29.00 Aligned_cols=94 Identities=9% Similarity=-0.005 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHHHH---------------HHHHHHHHHHhCCCcccceEEEecceeEEEEEEe
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEVIE---------------RCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMM 295 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~y~---------------~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~ 295 (368)
..++.+....+|+.+||.+.|+..++|++.- .|...+. ..........-. |..+.+.
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----i~~i~i~ 84 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVID---NVFHPSPEAKAA-----IARIDIV 84 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHH---HTCCCCTTCEEE-----EEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHH---hcCCCCccccCe-----EEEEEEE
Confidence 4455555678999999999999988887432 2222222 110010111111 4455666
Q ss_pred CCeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeee
Q 017680 296 GSSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQ 360 (368)
Q Consensus 296 ~~~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiq 360 (368)
++.+.+.+.+. ...| .+..+.++|.|. +..|+|+...
T Consensus 85 gd~A~a~~~~~-------------~~~~-----~~~~d~~~l~k~----------dg~WkI~~~~ 121 (128)
T 3blz_A 85 GTAASARIDTD-------------DISG-----FRFTDFFNLLKV----------EGKWTVVSKI 121 (128)
T ss_dssp TTEEEEEEEEE-------------EETT-----EEEEEEEEEEEE----------TTEEEEEEEE
T ss_pred CCEEEEEEEEE-------------EcCC-----CceEEeEEEEEE----------CCEEEEEEEE
Confidence 78888877763 0112 246778899775 3579998753
No 22
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=68.86 E-value=38 Score=27.37 Aligned_cols=90 Identities=11% Similarity=0.140 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH---------------HHHHHHHHHHHHhCCCcccceEEEecceeEEEEEEeC
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV---------------IERCKAEHTAYQSHGIFFDNRILHVSEVEVRETKMMG 296 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~---------------y~~~~~~i~~r~~~G~~~d~kiL~I~~veL~~ak~~~ 296 (368)
.++.+....+++.+||.+.|+..++|++ +..|...+.++ +-..... ..|..+.+.+
T Consensus 14 I~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~---~p~~~~~------~~I~~I~i~g 84 (125)
T 3duk_A 14 ITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSN---GPAKNVQ------SRITNIDIVG 84 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHH---CCCTTCE------EEEEEEEEET
T ss_pred HHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhcc---CCCCccc------ceEEEEEEEC
Confidence 3444444668888999999999988876 24455555544 1111111 1345566677
Q ss_pred CeeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEee
Q 017680 297 SSPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLRE 358 (368)
Q Consensus 297 ~~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~e 358 (368)
+.+.+.|.+.. -. | ..+.++.+|.+. +..|+|+.
T Consensus 85 d~A~a~v~~~~--------~~-----~-----~~f~D~l~L~k~----------dg~WkIv~ 118 (125)
T 3duk_A 85 TVAHARVEAEN--------WT-----N-----FKFSDLFLLLKL----------DGKWTIVN 118 (125)
T ss_dssp TEEEEEEEEEC--------SS-----S-----CCEEEEEEEEEE----------TTEEEEEE
T ss_pred CEEEEEEEEEE--------cC-----C-----CeEEEEEEEEEe----------CCEEEEEE
Confidence 77777765420 00 1 366888999775 36799986
No 23
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=68.14 E-value=14 Score=29.89 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH-H--------HHHHHHHHHHHhCCCc-ccce-EEEecceeEEEEEEeCCee
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV-I--------ERCKAEHTAYQSHGIF-FDNR-ILHVSEVEVRETKMMGSSP 299 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~-y--------~~~~~~i~~r~~~G~~-~d~k-iL~I~~veL~~ak~~~~~p 299 (368)
..++.+....+||.+||.+.|..+++|++ + .- ..+|.++-..-.. +... .+.+.++. +...++.+
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~g~~~~G-~~aI~~~~~~~~~~~~~~~~~~~~~~~---v~~~gd~A 79 (142)
T 2gxf_A 4 QLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKPGMIARG-KEEIKKAFITIANYFNHHIVPTQGKMI---LLEAGDTV 79 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSSSCEEEH-HHHHHHHHHHTTSCCCSSCCCEEEEEE---EEEETTEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCCCCcccC-HHHHHHHHHHHHHhhCCCceEEEEEEE---EEEcCCEE
Confidence 34566666889999999999998877753 2 11 2333333222111 0111 11122222 23457777
Q ss_pred EEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeecccc
Q 017680 300 IIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGV 364 (368)
Q Consensus 300 vitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~ 364 (368)
+++..+... .+.+| .+- .....|+.+|+|.. +..|+++-=.-.|.
T Consensus 80 ~~~~~~~~~-----~~~~G-----~~~-~~~g~~t~v~~r~~---------dG~Wri~~d~~~~~ 124 (142)
T 2gxf_A 80 LVLSQTLLD-----SDKKD-----SEY-AMERRATYVFKKNA---------QGEWLCVIDNSYGT 124 (142)
T ss_dssp EEEEEEECC-----C---------------EEEEEEEEEECT---------TSCEEEEEEETTGG
T ss_pred EEEEEEEEE-----ECCCC-----CeE-eeeEEEEEEEEECC---------CCCEEEEEECCCCc
Confidence 777666532 12333 221 13456788886621 35699876554444
No 24
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=66.98 E-value=30 Score=27.24 Aligned_cols=29 Identities=10% Similarity=0.318 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhc--CHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYC--SPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~c--se~~ 259 (368)
..+..+....+||.+||++.|-.+. +|++
T Consensus 6 ~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~ 36 (122)
T 3b7c_A 6 DIVQLLKGQEEAWNRGDLDAYMQGYWQNEQL 36 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCCSTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCCCE
Confidence 3455555689999999999987754 4543
No 25
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=60.40 E-value=63 Score=25.78 Aligned_cols=89 Identities=10% Similarity=0.066 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH--------------HHHHHHHHHHHHhC-CCcccceEEEecceeEEEEEEeCC
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEV--------------IERCKAEHTAYQSH-GIFFDNRILHVSEVEVRETKMMGS 297 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~--------------y~~~~~~i~~r~~~-G~~~d~kiL~I~~veL~~ak~~~~ 297 (368)
++.+..-.+++.+||.+.|+.-++|++ +..|.. +....+. +.. +...|..+.+.++
T Consensus 12 ~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~--------~~~~i~~I~i~gd 82 (120)
T 3fka_A 12 TALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETD--------PFWAISSVSVQGD 82 (120)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCC--------CCEEEEEEEEETT
T ss_pred HHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCC--------ceEEEEEEEEECC
Confidence 333334567778899999999888887 456666 5532211 111 1223333445567
Q ss_pred eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeee
Q 017680 298 SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREM 359 (368)
Q Consensus 298 ~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~ei 359 (368)
.+.+.|.+.- .| ..+.+..+|.+. +..|+++.-
T Consensus 83 ~A~a~v~~~~--------------~~-----~~f~D~~~L~k~----------dg~WkIv~K 115 (120)
T 3fka_A 83 IAMLHVENDW--------------AG-----MRFDDFLTVLLH----------EGSWRIVSK 115 (120)
T ss_dssp EEEEEEEEEE--------------TT-----EEEEEEEEEEEE----------TTEEEEEEE
T ss_pred EEEEEEEEEc--------------CC-----CceEEEEEEEEe----------CCEEEEEEE
Confidence 7777776321 11 367899999875 367999863
No 26
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=59.72 E-value=58 Score=25.11 Aligned_cols=28 Identities=14% Similarity=0.283 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.+++.+....+||..||.+.|..+++|+
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~l~a~D 39 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDD 39 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCC
Confidence 3555666678899999999999887765
No 27
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=58.37 E-value=44 Score=26.33 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
++.....++||..||++.|..+|+|++
T Consensus 9 ~~~v~~f~~A~~~gD~~~l~~lla~Dv 35 (114)
T 3f40_A 9 RDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 445555788999999999999998875
No 28
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=52.41 E-value=46 Score=26.03 Aligned_cols=28 Identities=11% Similarity=0.220 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+....+||.+||++.|..+|+|++
T Consensus 5 ~~~~v~~~~~~~~~~d~~~~~~~~a~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcce
Confidence 3556666778999999999999999864
No 29
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=49.68 E-value=97 Score=24.68 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
..++.+...++||.+||.+.|..++++++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 6 KIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 34566666889999999999999998755
No 30
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=44.61 E-value=1e+02 Score=25.01 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
..++.+....+||.+||++.|..+++|+
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D 32 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPD 32 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 3455666677899999999999998764
No 31
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=43.74 E-value=6.2 Score=32.32 Aligned_cols=32 Identities=3% Similarity=0.094 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 228 FVSEVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 228 Fl~~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
=+..++++|...++|+..||.+.|..+|+|++
T Consensus 10 ~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~ 41 (134)
T 3dmc_A 10 TLKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE
Confidence 35677888888999999999999999887653
No 32
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=43.58 E-value=1.4e+02 Score=24.64 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
...++.+.....||..||.+.|..+.+++
T Consensus 16 ~aI~~~~~~~~~A~~~~D~d~~~~lfa~D 44 (172)
T 3cu3_A 16 SAIRAFHRQMIDAWNRGSGEGFAAPFSET 44 (172)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 34556666688999999999999877666
No 33
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=42.78 E-value=1.3e+02 Score=24.33 Aligned_cols=28 Identities=11% Similarity=0.205 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHc-CCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMK-GDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~-GDle~Lk~~cse~ 258 (368)
.+++.+.....|+.. ||.+.+..+++|+
T Consensus 29 ~I~~l~~~y~~alD~~~D~d~~~~lfteD 57 (163)
T 3b8l_A 29 AIQDLMIAYAHAVDTVSDIDAVLDVFTED 57 (163)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHCcCCCHHHHHhhcCCC
Confidence 344444456678888 9999998877664
No 34
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=41.65 E-value=1.4e+02 Score=24.34 Aligned_cols=27 Identities=11% Similarity=-0.020 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.++.+..-..|+..+|.+.+..+++|+
T Consensus 16 I~~l~~~y~~a~D~~D~~~~~~lf~~D 42 (170)
T 2chc_A 16 IQALCARYCLTINTQDGEGWAGCFTED 42 (170)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHhcccCc
Confidence 334444456888899999999877755
No 35
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=40.06 E-value=65 Score=26.57 Aligned_cols=30 Identities=10% Similarity=0.280 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHH-HHHcCCHHHHHhhcCHHH
Q 017680 230 SEVQEAIRPVLS-AYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 230 ~~ar~~~~pIle-A~~~GDle~Lk~~cse~~ 259 (368)
..-++.+....+ ||..||++.|..||+++.
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~ 57 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGY 57 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCe
Confidence 334555666555 899999999999998764
No 36
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=38.03 E-value=1.4e+02 Score=23.28 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 229 VSEVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 229 l~~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
+..+...|.....||..||++.|..+.+++
T Consensus 13 ~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 13 LADVTAAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhccCC
Confidence 455666676677999999999999988876
No 37
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=29.98 E-value=2.1e+02 Score=22.79 Aligned_cols=27 Identities=19% Similarity=0.262 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.++.+....+||.+||++.|..+|+|+
T Consensus 6 ~~~~v~~~~~a~~~~d~~~~~~~~a~D 32 (152)
T 2gex_A 6 NKERCLEMVAAWNRWDVSGVVAHWAPD 32 (152)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 455666688899999999999988764
No 38
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=28.01 E-value=26 Score=29.88 Aligned_cols=55 Identities=13% Similarity=0.250 Sum_probs=36.2
Q ss_pred cccccChHHHHHHHHHhcC----CCCC---hhhHHHHHHHHHHHHHHHHHcC--CHHHHHhhcC
Q 017680 202 TIFQETDAAASIKEIRRRD----PSFS---LPDFVSEVQEAIRPVLSAYMKG--DVETLKKYCS 256 (368)
Q Consensus 202 ~lf~ete~a~~l~eIk~~D----P~Fd---~~~Fl~~ar~~~~pIleA~~~G--Dle~Lk~~cs 256 (368)
++|.+.=....+.+|+.++ |+|- ...|+..+.+.+..|..|...| |.+.|....+
T Consensus 16 ~l~~~g~LD~~f~qL~~L~~~~~~~~~~ell~~Fl~d~~~~l~~L~~al~~~~~D~~~l~~~aH 79 (153)
T 3us6_A 16 SMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAHVH 79 (153)
T ss_dssp HHHHTTSCCHHHHHHHHTCBTTBTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHH
T ss_pred hcccccchHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHH
Confidence 3343333334466666553 4453 2678888888888899999998 8888765543
No 39
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=27.87 E-value=2.4e+02 Score=22.67 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=30.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHH
Q 017680 224 SLPDFVSEVQEAIRPVLSAYMKGDVETLKKYCSPEVI 260 (368)
Q Consensus 224 d~~~Fl~~ar~~~~pIleA~~~GDle~Lk~~cse~~y 260 (368)
|.+.=..+..++|...-.|+..+|++.|..++++++.
T Consensus 5 ~~~~~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~~ 41 (129)
T 2owp_A 5 NQPDIVAQVQAAFVEYERALVENDIEAMNALFWHTPE 41 (129)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTCHHHHHHTBCCSTT
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCCHHHHHhhccCCCc
Confidence 3445566778888888999999999999999988864
No 40
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=26.37 E-value=31 Score=27.08 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+....+||.+||++.|..+++|++
T Consensus 7 ~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 34 (135)
T 3fgy_A 7 NVQIVKDFFAAMGRGDKKGLLAVSAEDI 34 (135)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 4556666888999999999999987764
No 41
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=25.99 E-value=31 Score=25.94 Aligned_cols=29 Identities=10% Similarity=0.291 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
..++.+....+||.+||++.|..+++|++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 34555666788999999999999888763
No 42
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=25.11 E-value=21 Score=28.38 Aligned_cols=27 Identities=11% Similarity=0.141 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
++.+....+||.+||++.|..+|+|++
T Consensus 15 ~~~v~~~~~a~~~gD~~~~~~l~a~D~ 41 (140)
T 3ec9_A 15 YQIVADHYAASDRHDPAAMMADIAPAI 41 (140)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhCCCHHHHHHhcCCCe
Confidence 555666778999999999999887764
No 43
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=24.93 E-value=2.6e+02 Score=22.10 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.+++.+..-..|+..||.+.+..+++|+
T Consensus 20 ~I~~l~~~y~~a~D~~d~~~~~~lf~~D 47 (155)
T 2rfr_A 20 EIRELIARYGPLADSGDAEALSELWVED 47 (155)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhcCCc
Confidence 3444555567788899999999877765
No 44
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=23.63 E-value=35 Score=27.27 Aligned_cols=27 Identities=15% Similarity=0.329 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
++.+...++||.+||++.|..++++++
T Consensus 25 ~~~v~~~~~a~~~~D~~~l~~l~a~D~ 51 (149)
T 1nww_A 25 EKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhCCCE
Confidence 445555788999999999999998764
No 45
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=23.46 E-value=37 Score=26.20 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
..++.+....+||.+||.+.|..+++|++
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 36 (131)
T 1oh0_A 8 EVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCE
Confidence 34555666789999999999999888764
No 46
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=23.27 E-value=30 Score=27.05 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
.++..+...++||.++|++.|..+++++
T Consensus 9 ~~~~~~~~~~~a~n~~D~~~l~~l~a~D 36 (122)
T 3h3h_A 9 FAQQFSREWIDAWNAHDLDAILSHYADG 36 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhcCCC
Confidence 3455555688999999999999887653
No 47
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=23.11 E-value=34 Score=26.94 Aligned_cols=28 Identities=14% Similarity=0.391 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+....+||.+||++.|..+++|++
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 37 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcE
Confidence 3455666779999999999999998875
No 48
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=22.97 E-value=37 Score=27.63 Aligned_cols=28 Identities=25% Similarity=0.425 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCHH
Q 017680 231 EVQEAIRPVLSAYMKGDVETLKKYCSPE 258 (368)
Q Consensus 231 ~ar~~~~pIleA~~~GDle~Lk~~cse~ 258 (368)
..++.+...++||.+||++.|..+++|+
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D 57 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDEN 57 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 3455666688899999999999888765
No 49
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=22.81 E-value=26 Score=28.92 Aligned_cols=28 Identities=25% Similarity=0.403 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHHH
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEVI 260 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~y 260 (368)
++.+....+||.+||++.|..+|+|++.
T Consensus 23 ~~lv~~~~~a~~~~D~~~l~~l~a~D~v 50 (151)
T 3f7x_A 23 TELVNAYYAAFNAGDMPAFLALLSEDVI 50 (151)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 4455556789999999999998877653
No 50
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=22.75 E-value=1.3e+02 Score=23.85 Aligned_cols=28 Identities=21% Similarity=0.504 Sum_probs=20.9
Q ss_pred HHHHHHHH-HHHHcCCHHHHHhhcCHHHH
Q 017680 233 QEAIRPVL-SAYMKGDVETLKKYCSPEVI 260 (368)
Q Consensus 233 r~~~~pIl-eA~~~GDle~Lk~~cse~~y 260 (368)
++.+.... ++|..||++.|..+|+|++.
T Consensus 9 ~~~v~~~~~~~~~~~d~~~~~~~~a~d~~ 37 (146)
T 3f9s_A 9 KEILTQFTREVWSEGNIEASDKYIAPKYT 37 (146)
T ss_dssp HHHHHHHHHHHTTTCCGGGHHHHEEEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHcCCCee
Confidence 44455555 48899999999999887654
No 51
>2r25_A Phosphorelay intermediate protein YPD1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: a.24.10.2 PDB: 1c03_A 1oxk_A 1oxb_A 1c02_A 1qsp_A
Probab=22.43 E-value=40 Score=29.59 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=39.4
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHHHH-cCCHHHHHhhcCH----------HHHHHHHHHHHHHHhCCC
Q 017680 221 PSFS---LPDFVSEVQEAIRPVLSAYM-KGDVETLKKYCSP----------EVIERCKAEHTAYQSHGI 275 (368)
Q Consensus 221 P~Fd---~~~Fl~~ar~~~~pIleA~~-~GDle~Lk~~cse----------~~y~~~~~~i~~r~~~G~ 275 (368)
|+|. ...|+..+...|..|..|+. .+|.+.|..+++- .-...+..+++.+...+-
T Consensus 25 p~Fv~elV~~F~edse~~l~~L~~AL~~~~D~~~L~~~aH~LKGSSAnLGA~rV~~~C~~le~~~r~~n 93 (167)
T 2r25_A 25 SDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLGRKME 93 (167)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhcccCHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5563 47889999999999999999 9999999876642 223344455666665554
No 52
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=22.39 E-value=39 Score=28.32 Aligned_cols=42 Identities=12% Similarity=0.367 Sum_probs=29.1
Q ss_pred HHHHHhc----C-CCCC---hhhHHHHHHHHHHHHHHHHHcC--CHHHHHhh
Q 017680 213 IKEIRRR----D-PSFS---LPDFVSEVQEAIRPVLSAYMKG--DVETLKKY 254 (368)
Q Consensus 213 l~eIk~~----D-P~Fd---~~~Fl~~ar~~~~pIleA~~~G--Dle~Lk~~ 254 (368)
+.+++.+ + |+|- ...|+..+...+..|..|...| |.+.|+..
T Consensus 27 ~~~L~~L~~~~~~~~~~~elv~~Fl~d~~~~l~~L~~Al~~~~~D~~~l~~~ 78 (149)
T 1yvi_A 27 FQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLLEQPVVNFDKVDAY 78 (149)
T ss_dssp HHHHHHHHC---CTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHH
T ss_pred HHHHHHhhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHH
Confidence 4555555 2 6663 3568888888888899999988 78666543
No 53
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=21.95 E-value=36 Score=26.49 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+....+||.+||++.|..+++|++
T Consensus 5 ~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 32 (132)
T 3ebt_A 5 NMQTVRESYEAFHRRDLPGVLAALAPDV 32 (132)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHhccCHHHHHHhcCCCE
Confidence 3456666888999999999999998874
No 54
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=20.95 E-value=22 Score=28.86 Aligned_cols=27 Identities=15% Similarity=0.102 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 233 QEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 233 r~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
++.+....+||.+||++.|..+|+|++
T Consensus 7 ~~~v~~~~~a~~~gD~~~l~~l~a~Dv 33 (143)
T 3dm8_A 7 WRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHCCCHHHHHHhcCCCe
Confidence 444555778999999999999987664
No 55
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=20.80 E-value=47 Score=26.77 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+...++||..||++.|..+++|++
T Consensus 17 ~~~~v~~f~~a~~~gD~~~l~~l~a~D~ 44 (149)
T 2bng_A 17 AIRAVEAFLNALQNEDFDTVDAALGDDL 44 (149)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 4455666889999999999999988764
No 56
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=20.71 E-value=33 Score=27.05 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+...++||.+||++.|..+++|++
T Consensus 19 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 46 (129)
T 3fh1_A 19 TAEIMRRFNDVFQLHDPAALPELIAEEC 46 (129)
T ss_dssp HHHHHHHHHHHHHTTCGGGHHHHEEEEE
T ss_pred HHHHHHHHHHHHHccCHHHHHHhcCCCE
Confidence 4455556778999999999999886654
No 57
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=20.57 E-value=34 Score=27.22 Aligned_cols=28 Identities=11% Similarity=0.274 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHhhcCHHH
Q 017680 232 VQEAIRPVLSAYMKGDVETLKKYCSPEV 259 (368)
Q Consensus 232 ar~~~~pIleA~~~GDle~Lk~~cse~~ 259 (368)
.++.+...++||.+||++.|..+++|++
T Consensus 12 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 39 (150)
T 1s5a_A 12 ACETLRKFMAYMLEKDMKSWTELWDENA 39 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhCCCCE
Confidence 4556666889999999999999888764
No 58
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=20.39 E-value=4.7e+02 Score=25.22 Aligned_cols=110 Identities=22% Similarity=0.351 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCHHHH--HH------HH--HHHHHH-----HhCCCcccceEEEecceeEEEEEE
Q 017680 230 SEVQEAIRPVLSAYMKGDVETLKKYCSPEVI--ER------CK--AEHTAY-----QSHGIFFDNRILHVSEVEVRETKM 294 (368)
Q Consensus 230 ~~ar~~~~pIleA~~~GDle~Lk~~cse~~y--~~------~~--~~i~~r-----~~~G~~~d~kiL~I~~veL~~ak~ 294 (368)
+........+++++.+||.+.....|.+.+= +- +. .-++-+ ...+....++++.- .| .+
T Consensus 318 ~e~~~~~~~~l~~i~~gD~~~y~~l~~~~~t~fep~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~p-~v-----~~ 391 (444)
T 3soa_A 318 QEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNP-HI-----HL 391 (444)
T ss_dssp HHHHHHHHHHHHHHHHTCSHHHHHHEEEEEEEECGGGTTCEEEHHHHTHHHHHHTSTTCSSCCEEEEEEE-EE-----EE
T ss_pred HHHHHHHHHHHhhhhcCCchhhcccCCCCCCccCcccccccccCcchhhhhhhcccccCCCcceEeecCC-ce-----EE
Confidence 3444556679999999999999888776310 00 00 000000 12233334445543 33 33
Q ss_pred eCC-eeEEEEEEEEeEEEEEEcCCCCeecCCCCceeEEEEEEEEEEecccccCCCCCCCCeEEeeeeccccc
Q 017680 295 MGS-SPIIIVAFQTQQIYCVRDKHGTITEGGKDTIQTVYYAWAMQQVDAEELGEDVLYPIWKLREMQQLGVQ 365 (368)
Q Consensus 295 ~~~-~pvitV~F~aQqI~~vRDk~GeVVeGd~d~i~~v~yvW~f~r~d~eel~~~~~~~~WrL~eiqq~g~~ 365 (368)
.++ .++|+-.-.+| +.|..|.... .-..-+.+|+- + ...|+.+=+.+.|+.
T Consensus 392 ~~~~~a~~~y~~~~~----~~~~~~~~~~----~~~~~t~~~~~-~-----------~~~w~~~h~h~~~~~ 443 (444)
T 3soa_A 392 MGDESACIAYIRITQ----YLDAGGIPRT----AQSEETRVWHR-R-----------DGKWQIVHFHRSGAP 443 (444)
T ss_dssp ETTTEEEEEEEEEEE----EECTTSCEEE----EEEEEEEEEEE-E-----------TTEEEEEEEEEEESC
T ss_pred ecCcceeeeeeeeee----eeccCCCccc----cchhhheeeee-c-----------CCceEEEEEecCCCC
Confidence 444 58888777787 6676663322 22345667765 2 146999999998864
Done!