Citrus Sinensis ID: 017682

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
ccccccccccccccccEEccccccccccccHHHHHHHHHHHcccccccccEEEEcccccEEEEEEcccccccccccEEEEcccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEccccEEEEEEEcccccccEEEcccccccccHHHHHHHHHcccEEEEEcccccccEEEccccccccHHHHHHcccccccccccEEcccEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccc
cccHHHHHHHHHHHEEEccccccccccccccHHHHHHHcccccccccccccEEEccccEEEEEEEccccccccccHEEEEccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccEEEEEEcccccEEEEEccccccEEEEEEEcccccccHHHHHHHHHcccEEEEccccccccEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccccccc
MGHFSSMFYGLARSFsirkgknsescagRGAAEAMAKEAKRNEMILRSSgfvnvdssnNFAAVFSkrgekgvnqDCAIVWEEfgcqadmmfcgifdghgpwghFVAKKVresmpssllCNWQETLAEasllpdidldsdkkthrfniwkhSYVKTCAAVDQELEQHRqidsfysgttALTIVRQGEFIMVANVGDSRAVLattsedgslvpvqltvdfkpnlpyEAERIIQckgrvfcledepgvhrvwlpneecpglamsrafgdycvkdyglisvpevtqrhitsrdQFVVLATDGvwdvisnqEAIQIVSSTPNRAKSAKRLVECAVHAWKRkrkgiamdDISAIClffhssplsqqvhavatpk
MGHFSSMFYGLARSfsirkgknsescAGRGAAEAMAKEAKRNEMILRSsgfvnvdsSNNFAAVfskrgekgvNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLAttsedgslvpvqLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQeaiqivsstpnraksakRLVECAVHAWKRKRKGIAMDDISAICLFFhssplsqqvhavatpk
MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
*******FYGL**************************************GFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSS******SAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
********************************************************SNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAE********LDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF****************
MGHFSSMFYGLARSFSIR*******************EAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVS***********LVECAVHAWKRKRKGIAMDDISAICLFFHSSPLS**********
***********ARSFSIR*************************MILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETL***************KTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHS**************
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MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQVHAVATPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query368 2.2.26 [Sep-21-2011]
Q0WRB2373 Probable protein phosphat yes no 0.953 0.941 0.739 1e-160
Q9M9W9358 Probable protein phosphat no no 0.945 0.972 0.735 1e-157
Q6L482353 Probable protein phosphat yes no 0.937 0.977 0.584 1e-118
Q9LRZ4351 Probable protein phosphat no no 0.945 0.991 0.569 1e-115
Q9M8R7492 Probable protein phosphat no no 0.921 0.689 0.435 1e-89
Q8RXZ4504 Probable protein phosphat no no 0.861 0.628 0.443 5e-89
Q9FG61448 Probable protein phosphat no no 0.850 0.698 0.443 3e-87
Q9SA22491 Probable protein phosphat no no 0.847 0.635 0.454 2e-85
Q6ZKL8 531 Probable protein phosphat no no 0.839 0.581 0.475 4e-84
Q8H4S6427 Probable protein phosphat no no 0.817 0.704 0.454 4e-83
>sp|Q0WRB2|P2C73_ARATH Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1 Back     alignment and function desciption
 Score =  565 bits (1456), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 261/353 (73%), Positives = 309/353 (87%), Gaps = 2/353 (0%)

Query: 1   MGHFSSMFYGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNN 59
           MGHFSSMF GLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN
Sbjct: 1   MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNN 60

Query: 60  FAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
            A++FSKRGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLC
Sbjct: 61  LASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLC 120

Query: 120 NWQETLAEASLLPDIDLD-SDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTA 178
           NWQ+ LA+A+L P++DL+ S+KK  RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTA
Sbjct: 121 NWQKILAQATLEPELDLEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTA 180

Query: 179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
           LTIVRQGE I VANVGDSRAVLA  S++GSLV VQLT+DFKPNLP E ERII CKGRVFC
Sbjct: 181 LTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFC 240

Query: 239 LEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDG 298
           L+DEPGVHRVW P+ E PGLAMSRAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG
Sbjct: 241 LDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDG 300

Query: 299 VWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLF 351
           +WDVISNQEAI+IVSST  R K+AKRLVE AV AWK+KR+G +MDD+S +CLF
Sbjct: 301 IWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMSVVCLF 353

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9M9W9|P2C34_ARATH Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1 Back     alignment and function description
>sp|Q6L482|P2C48_ORYSJ Probable protein phosphatase 2C 48 OS=Oryza sativa subsp. japonica GN=Os05g0358500 PE=2 SV=1 Back     alignment and function description
>sp|Q9LRZ4|P2C41_ARATH Probable protein phosphatase 2C 41 OS=Arabidopsis thaliana GN=At3g16800 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
224123012368 predicted protein [Populus trichocarpa] 1.0 1.0 0.839 0.0
224123886368 predicted protein [Populus trichocarpa] 1.0 1.0 0.834 0.0
225450755366 PREDICTED: probable protein phosphatase 0.989 0.994 0.807 1e-177
255542816359 protein phosphatase 2c, putative [Ricinu 0.975 1.0 0.810 1e-174
356572950369 PREDICTED: probable protein phosphatase 1.0 0.997 0.796 1e-173
363807333368 uncharacterized protein LOC100794039 [Gl 0.980 0.980 0.787 1e-173
357511799377 hypothetical protein MTR_7g112490 [Medic 1.0 0.976 0.755 1e-168
356576817367 PREDICTED: probable protein phosphatase 0.991 0.994 0.772 1e-166
356505797371 PREDICTED: probable protein phosphatase 1.0 0.991 0.800 1e-166
449454051367 PREDICTED: probable protein phosphatase 0.986 0.989 0.748 1e-166
>gi|224123012|ref|XP_002318972.1| predicted protein [Populus trichocarpa] gi|222857348|gb|EEE94895.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/368 (83%), Positives = 339/368 (92%)

Query: 1   MGHFSSMFYGLARSFSIRKGKNSESCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNNF 60
           MGHFSSMF GLA+SF+IRK K++ +  GR AAEAMAK+AK+NEMILRSSG VNVD S NF
Sbjct: 1   MGHFSSMFNGLAKSFTIRKVKSNGNGDGREAAEAMAKDAKKNEMILRSSGCVNVDGSKNF 60

Query: 61  AAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN 120
           A+VFS+RGEKGVNQDC IVWEEFGCQADM FCGIFDGHG WGHFVAKKVRESM +SLLCN
Sbjct: 61  ASVFSRRGEKGVNQDCCIVWEEFGCQADMTFCGIFDGHGQWGHFVAKKVRESMATSLLCN 120

Query: 121 WQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALT 180
           WQETLA+ SL PDIDL+SDKK  RFN+WKHSY+KTCAAVDQELEQHR+IDSFYSGTTALT
Sbjct: 121 WQETLAQCSLDPDIDLESDKKHQRFNMWKHSYLKTCAAVDQELEQHRKIDSFYSGTTALT 180

Query: 181 IVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLE 240
           IVRQGE I VANVGDSRAVLATT++DGSLV VQLTVDFKPNLP E ERI+QC+GRVFCL+
Sbjct: 181 IVRQGEHIFVANVGDSRAVLATTADDGSLVQVQLTVDFKPNLPQETERILQCRGRVFCLD 240

Query: 241 DEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVW 300
           DEPGVHRVW P+ E PGLAMSRAFGDYCVK++GLISVPEVTQRH+TS DQFV+LATDGVW
Sbjct: 241 DEPGVHRVWQPDAESPGLAMSRAFGDYCVKNFGLISVPEVTQRHLTSEDQFVILATDGVW 300

Query: 301 DVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQ 360
           DVISNQEA+QIVSSTP+RAK+AKRLV+ AVHAWKRKRKGIAMDDISAICLF HSSP SQQ
Sbjct: 301 DVISNQEAVQIVSSTPDRAKAAKRLVQSAVHAWKRKRKGIAMDDISAICLFVHSSPQSQQ 360

Query: 361 VHAVATPK 368
           VHAV+TPK
Sbjct: 361 VHAVSTPK 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224123886|ref|XP_002330233.1| predicted protein [Populus trichocarpa] gi|118481990|gb|ABK92926.1| unknown [Populus trichocarpa] gi|222871689|gb|EEF08820.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225450755|ref|XP_002283583.1| PREDICTED: probable protein phosphatase 2C 73 [Vitis vinifera] gi|296089709|emb|CBI39528.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255542816|ref|XP_002512471.1| protein phosphatase 2c, putative [Ricinus communis] gi|223548432|gb|EEF49923.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356572950|ref|XP_003554628.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|363807333|ref|NP_001242626.1| uncharacterized protein LOC100794039 [Glycine max] gi|255647130|gb|ACU24033.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357511799|ref|XP_003626188.1| hypothetical protein MTR_7g112490 [Medicago truncatula] gi|355501203|gb|AES82406.1| hypothetical protein MTR_7g112490 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356576817|ref|XP_003556526.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|356505797|ref|XP_003521676.1| PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] Back     alignment and taxonomy information
>gi|449454051|ref|XP_004144769.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] gi|449490868|ref|XP_004158730.1| PREDICTED: probable protein phosphatase 2C 73-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query368
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 1.0 0.986 0.723 9e-148
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.959 0.986 0.733 2e-143
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.921 0.965 0.581 8.1e-108
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.616 0.450 0.528 8.2e-85
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.559 0.459 0.529 5.8e-82
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.592 0.443 0.532 5.1e-81
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.788 0.627 0.486 5.4e-79
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.809 0.636 0.463 5.5e-77
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.831 0.801 0.432 3.3e-70
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.774 0.861 0.446 5.2e-65
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1443 (513.0 bits), Expect = 9.0e-148, P = 9.0e-148
 Identities = 270/373 (72%), Positives = 319/373 (85%)

Query:     1 MGHFSSMFYGLARSFSIRKGKNSE-SCAGRGAAEAMAKEAKRNEMILRSSGFVNVDSSNN 59
             MGHFSSMF GLARSFSI+K KN+  +C  + AA+ MA EAK+ E+IL+SSG+VNV  SNN
Sbjct:     1 MGHFSSMFNGLARSFSIKKVKNNNGNCDAKEAADEMASEAKKKELILKSSGYVNVQGSNN 60

Query:    60 FAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
              A++FSKRGEKGVNQDCA+VWE FGCQ DM+FCGIFDGHGPWGH+VAK+VR SMP SLLC
Sbjct:    61 LASLFSKRGEKGVNQDCALVWEGFGCQEDMIFCGIFDGHGPWGHYVAKQVRNSMPLSLLC 120

Query:   120 NWQETLAEASLLPDIDLD-SDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTA 178
             NWQ+ LA+A+L P++DL+ S+KK  RF+IWK SY+KTCA VDQELE HR+IDS+YSGTTA
Sbjct:   121 NWQKILAQATLEPELDLEGSNKKISRFDIWKQSYLKTCATVDQELEHHRKIDSYYSGTTA 180

Query:   179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
             LTIVRQGE I VANVGDSRAVLA  S++GSLV VQLT+DFKPNLP E ERII CKGRVFC
Sbjct:   181 LTIVRQGEVIYVANVGDSRAVLAMESDEGSLVAVQLTLDFKPNLPQEKERIIGCKGRVFC 240

Query:   239 LEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDG 298
             L+DEPGVHRVW P+ E PGLAMSRAFGDYC+K+YGL+SVPEVTQRHI+++D F++LA+DG
Sbjct:   241 LDDEPGVHRVWQPDAETPGLAMSRAFGDYCIKEYGLVSVPEVTQRHISTKDHFIILASDG 300

Query:   299 VWDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSP-- 356
             +WDVISNQEAI+IVSST  R K+AKRLVE AV AWK+KR+G +MDD+S +CLF HSS   
Sbjct:   301 IWDVISNQEAIEIVSSTAERPKAAKRLVEQAVRAWKKKRRGYSMDDMSVVCLFLHSSSSS 360

Query:   357 -LSQQVHAVATPK 368
              LSQ  HA+   K
Sbjct:   361 SLSQHHHAMTILK 373
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0WRB2P2C73_ARATH3, ., 1, ., 3, ., 1, 60.73930.95380.9410yesno
Q6L482P2C48_ORYSJ3, ., 1, ., 3, ., 1, 60.58400.93750.9773yesno
Q9M9W9P2C34_ARATH3, ., 1, ., 3, ., 1, 60.73520.94560.9720nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_XIII0701
hypothetical protein (368 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-68
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-48
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-37
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-28
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-17
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 7e-15
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  214 bits (547), Expect = 4e-68
 Identities = 93/299 (31%), Positives = 138/299 (46%), Gaps = 50/299 (16%)

Query: 59  NFAAVFSKRGEKGVNQDCAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLL 118
             A V  K G++  N+D  ++      + D    G+FDGHG  GH   +   + +   LL
Sbjct: 1   FSAGVSDKGGDRKTNEDAVVIKPNLNNE-DGGLFGVFDGHG--GHAAGEFASKLLVEELL 57

Query: 119 CNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQ--IDSFYSGT 176
              +ETL  +    +  L                 K     D+E+ +  Q   D   SGT
Sbjct: 58  EELEETLTLSEEDIEEAL----------------RKAFLRADEEILEEAQDEPDDARSGT 101

Query: 177 TALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRV 236
           TA+  + +G  + VANVGDSRAVL    E      VQLT D KP    E ERI +  GRV
Sbjct: 102 TAVVALIRGNKLYVANVGDSRAVLCRNGE-----AVQLTKDHKPVNEEERERIEKAGGRV 156

Query: 237 FCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLAT 296
                                LA++RA GD+ +K  G+ + P+VT   +T  D F++LA+
Sbjct: 157 S-------------NGRVPGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILAS 202

Query: 297 DGVWDVISNQEAIQIVSSTPNR---AKSAKRLVECAVHAWKRKRKGIAMDDISAICLFF 352
           DG+WDV+SNQEA+ IV S   +    ++A+ LV+ A+            D+I+ + +  
Sbjct: 203 DGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 368
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.86
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.74
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.57
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.39
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.2
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=9.5e-52  Score=393.92  Aligned_cols=268  Identities=36%  Similarity=0.515  Sum_probs=229.7

Q ss_pred             eeccCCCceEEEEeecCCCCCCCceeEeecccC-----CCCCeeEEEEEeCCCcChHHHHHHHHHhhHHHHHHHHHHHHH
Q 017682           52 VNVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFG-----CQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLA  126 (368)
Q Consensus        52 ~~~~~~~~~~~~~s~~G~R~~nED~~~v~~~~~-----~~~~~~l~gV~DGhGg~G~~aa~~~~~~l~~~l~~~~~~~~~  126 (368)
                      ....++....++++.+|+|..|||++.....+.     ......|||||||||  |+.+|+|+.++|+..+.+++...  
T Consensus        33 ~~~~~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~--  108 (330)
T KOG0698|consen   33 LSINESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFP--  108 (330)
T ss_pred             ccccccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcc--
Confidence            345566677788999999999999998876643     233689999999999  99999999999999998765510  


Q ss_pred             hhcCCCCcccccccccchhHHHHHHHHHHHH-HHHHHHHhcccCCCCCCCceEEEEEEECC-EEEEEEecCCceEEEEeC
Q 017682          127 EASLLPDIDLDSDKKTHRFNIWKHSYVKTCA-AVDQELEQHRQIDSFYSGTTALTIVRQGE-FIMVANVGDSRAVLATTS  204 (368)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~-~~d~~l~~~~~~~~~~~GtTa~~~~i~~~-~l~vanvGDSRa~l~~~~  204 (368)
                                      .....++.++.++|. .+|.++.+. ..+...+|||++++++..+ +|||||+|||||+|++. 
T Consensus       109 ----------------~~~~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~-  170 (330)
T KOG0698|consen  109 ----------------KDRQDVKDALRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRK-  170 (330)
T ss_pred             ----------------cchHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecC-
Confidence                            011458999999999 699999875 2223568899988888754 99999999999999987 


Q ss_pred             CCCceeEEEcCCCCCCCChhHHHHHHHCCCeEEeecCCCCceeeecCCCCCCcccccccccCcccccCCceecccEEEEE
Q 017682          205 EDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRH  284 (368)
Q Consensus       205 ~~g~l~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~~sRa~Gd~~~k~~gv~~~Pdv~~~~  284 (368)
                        |. ++++||.||+|+.++|+.||+++||+|.....   ++|+      .+.|++||+|||+.+|..+++++||+.+..
T Consensus       171 --~~-~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~---~~Rv------~G~LavsRa~GD~~~k~~~v~a~Pei~~~~  238 (330)
T KOG0698|consen  171 --GG-VAVQLSVDHKPDREDERERIEAAGGRVSNWGG---VWRV------NGVLAVSRAFGDVELKSQGVIAEPEIQQVK  238 (330)
T ss_pred             --CC-eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC---cceE------eceEEEeeecCCHHhcCCcEecCCceEEEE
Confidence              43 78999999999999999999999999997543   5566      358999999999999988899999999999


Q ss_pred             ecCCCeEEEEEcCCCccCcCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHHhhCCCCCCCceEEEEEEcCCCCCccc
Q 017682          285 ITSRDQFVVLATDGVWDVISNQEAIQIVSS----TPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPLSQQ  360 (368)
Q Consensus       285 l~~~d~fliLaSDGlwd~l~~~ei~~iv~~----~~~~~~aa~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~~~~~~~~  360 (368)
                      +++.|+|||||||||||++++||++++|+.    ...+..+++.|.+.|+.+       ++.||||||||+|.+.+..+.
T Consensus       239 ~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-------~s~DnitvvvV~l~~~~~~~~  311 (330)
T KOG0698|consen  239 INSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-------GSKDNITVVVVRLKSSPKSPS  311 (330)
T ss_pred             cCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-------CCCCCeEEEEEEecCcccccc
Confidence            999999999999999999999999999998    558899999999999987       899999999999998875433

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 3e-19
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-18
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-18
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 6e-18
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-17
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-15
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-15
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-15
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-15
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-15
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-15
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 7e-14
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-13
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 1e-13
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-12
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 2e-11
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 2e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-10
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 7e-10
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-06
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 23/309 (7%)
Query: 61  AAVFSKRGEKGVNQDCAIVWEEF-GCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
           AA+F+  G +   +D   +  +    + D  F G+FDG    G F ++ V++ +   L+ 
Sbjct: 24  AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGT--VGDFASENVKDLVVPQLIS 81
Query: 120 N--WQE-TLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQH-RQIDSFYSG 175
           +  WQE T    S +P  ++D         +   +        D EL +   Q++  Y+ 
Sbjct: 82  SPAWQEVTEXLRSDVPATEVDEKLP----QLLDQAVDDXYKNADNELVKXCEQLNKDYAS 137
Query: 176 TTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGR 235
           +T++T V    F+ V ++GDSR      + +G L    LTVD KP+ P+E  RI +  G 
Sbjct: 138 STSVTAVLAKGFVAVGHLGDSRIAXGVETPNG-LNCEFLTVDHKPDXPHEKLRIXRNGGS 196
Query: 236 VFCL---EDEPGVHRVWLP-----NEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITS 287
           V  L    ++P +            E+   L  SRAFG   +K YGL + P+V    +T 
Sbjct: 197 VEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTP 256
Query: 288 RDQFVVLATDGVWDVISNQEAIQIVSSTPNRAKS-AKRLVECAVHAWKRKRKGIAMDDIS 346
           + +  +LATDG+WDV S  +A++I        ++ A+ LVE  +   +++ +  + D+I+
Sbjct: 257 QHRVXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTL--AEQQSRNQSADNIT 314
Query: 347 AICLFFHSS 355
           A  +FF  +
Sbjct: 315 AXTVFFKKT 323
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query368
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-103
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-59
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-58
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 7e-57
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-54
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 7e-53
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 3e-52
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 4e-51
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-49
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 9e-49
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-48
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-42
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-36
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-05
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-04
3rnr_A211 Stage II sporulation E family protein; structural 5e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
1txo_A237 Putative bacterial enzyme; serine/threonine protei 7e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  307 bits (788), Expect = e-103
 Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 17/306 (5%)

Query: 61  AAVFSKRGEKGVNQDCAIVWEEF-GCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLC 119
           AA+F+  G +   +D   +  +    + D  F G+FDG    G F ++ V++ +   L+ 
Sbjct: 24  AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLIS 81

Query: 120 NWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQE-LEQHRQIDSFYSGTTA 178
           +         +L      ++       +   +        D E ++   Q++  Y+ +T+
Sbjct: 82  SP-AWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTS 140

Query: 179 LTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFC 238
           +T V    F+ V ++GDSR  +   + +G L    LTVD KP++P+E  RI++  G V  
Sbjct: 141 VTAVLAKGFVAVGHLGDSRIAMGVETPNG-LNCEFLTVDHKPDMPHEKLRIMRNGGSVEY 199

Query: 239 LEDEPGVHRVWL--------PNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHITSRDQ 290
           L +      +            E+   L  SRAFG   +K YGL + P+V    +T + +
Sbjct: 200 LHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHR 259

Query: 291 FVVLATDGVWDVISNQEAIQIVSSTPNRAKS-AKRLVECAVHAWKRKRKGIAMDDISAIC 349
            ++LATDG+WDV+S  +A++I        ++ A+ LVE  +   + + +    D+I+A+ 
Sbjct: 260 VMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQS--ADNITAMT 317

Query: 350 LFFHSS 355
           +FF  +
Sbjct: 318 VFFKKT 323
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.85
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.82
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.66
3f79_A255 Probable two-component response regulator; adaptor 99.65
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.28
3eq2_A394 Probable two-component response regulator; adaptor 98.06
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=9.1e-51  Score=388.65  Aligned_cols=273  Identities=31%  Similarity=0.394  Sum_probs=220.4

Q ss_pred             eccCCCceEEEEeecCCCCCCCceeEeecccCC------------------CCCeeEEEEEeCCCcChHHHHHHHHHhhH
Q 017682           53 NVDSSNNFAAVFSKRGEKGVNQDCAIVWEEFGC------------------QADMMFCGIFDGHGPWGHFVAKKVRESMP  114 (368)
Q Consensus        53 ~~~~~~~~~~~~s~~G~R~~nED~~~v~~~~~~------------------~~~~~l~gV~DGhGg~G~~aa~~~~~~l~  114 (368)
                      +.......+|++|.+|+|..|||++++.+.+..                  ..+..|||||||||  |+.+++++++.++
T Consensus         8 ~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~   85 (337)
T 3qn1_B            8 YELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLH   85 (337)
T ss_dssp             ---CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHH
T ss_pred             hhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHH
Confidence            334445557999999999999999999766421                  12578999999999  8899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCcccccccccchhHHHHHHHHHHHHHHHHHHHhcc-------------cCCCCCCCceEEEE
Q 017682          115 SSLLCNWQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHR-------------QIDSFYSGTTALTI  181 (368)
Q Consensus       115 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~-------------~~~~~~~GtTa~~~  181 (368)
                      ..|.+.+...........       ........+++++.++|..+|+++....             ......+|||++++
T Consensus        86 ~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~  158 (337)
T 3qn1_B           86 FALAEEIERIKDELCKRN-------TGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVA  158 (337)
T ss_dssp             HHHHHHHHHTC-------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEE
T ss_pred             HHHHHHHHhhhhhhhccc-------cccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEE
Confidence            998876653211100000       0011235688999999999999998644             12235699999999


Q ss_pred             EEECCEEEEEEecCCceEEEEeCCCCceeEEEcCCCCCCCChhHHHHHHHCCCeEEeecCCCCceeeecCCCCCCccccc
Q 017682          182 VRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMS  261 (368)
Q Consensus       182 ~i~~~~l~vanvGDSRa~l~~~~~~g~l~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~~s  261 (368)
                      ++.++++|+|||||||+|++|.   |.  +++||.||+|.++.|+.||...||.+....    ..|+      .+.+++|
T Consensus       159 ~i~~~~l~~anvGDSR~~l~r~---g~--~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~----~~r~------~g~l~~s  223 (337)
T 3qn1_B          159 LVCSSHIVVSNCGDSRAVLFRG---KE--AMPLSVDHKPDREDEYARIENAGGKVIQWQ----GARV------FGVLAMS  223 (337)
T ss_dssp             EECSSEEEEEEESSCEEEEEET---TE--EEESCCCCCTTSHHHHHHHHHTTCCEEESS----SEEE------TTTBSCS
T ss_pred             EEECCEEEEEeccCcEEEEEeC---CE--eeeecCCCCCCCHHHHHHHHHcCCeEEecC----Ccee------cCccccc
Confidence            9999999999999999999998   84  499999999999999999999999987532    1233      4679999


Q ss_pred             ccccCcccccCCceecccEEEEEecCCCeEEEEEcCCCccCcCHHHHHHHHHc---------------------CCCHHH
Q 017682          262 RAFGDYCVKDYGLISVPEVTQRHITSRDQFVVLATDGVWDVISNQEAIQIVSS---------------------TPNRAK  320 (368)
Q Consensus       262 Ra~Gd~~~k~~gv~~~Pdv~~~~l~~~d~fliLaSDGlwd~l~~~ei~~iv~~---------------------~~~~~~  320 (368)
                      |+|||..+|++ ++++|++..+.+.+.++|||||||||||+++++||+++++.                     ..+++.
T Consensus       224 RalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (337)
T 3qn1_B          224 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQA  302 (337)
T ss_dssp             BCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHH
T ss_pred             cccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHH
Confidence            99999999987 99999999999988777999999999999999999999975                     345789


Q ss_pred             HHHHHHHHHHHHHHhhCCCCCCCceEEEEEEcCCCCC
Q 017682          321 SAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSPL  357 (368)
Q Consensus       321 aa~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~~~~~  357 (368)
                      +|+.|++.|+.+       |+.||||||||+|.....
T Consensus       303 ~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~~  332 (337)
T 3qn1_B          303 AADYLSMLALQK-------GSKDNISIIVIDLKAQRK  332 (337)
T ss_dssp             HHHHHHHHHHHT-------TCCSCEEEEEEECCSCC-
T ss_pred             HHHHHHHHHHHc-------CCCCCEEEEEEEecCCcc
Confidence            999999999997       899999999999987654
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 368
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 7e-30
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-11
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (285), Expect = 7e-30
 Identities = 64/297 (21%), Positives = 106/297 (35%), Gaps = 28/297 (9%)

Query: 62  AVFSKRGEKGVNQD-CAIVWEEFGCQADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCN 120
            + S +G +   +D    V           F  ++DGH   G  VAK   E +   +  N
Sbjct: 24  GLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNN 81

Query: 121 WQETLAEASLLPDIDLDSDKKTHRFNIWKHSYVKTCAAVDQELEQHRQIDSFYSGTTALT 180
                            +    +  N  +  +++    +    E+    D   SG+TA+ 
Sbjct: 82  QD---------FKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADR--SGSTAVG 130

Query: 181 IVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTVDFKPNLPYEAERIIQCKGRVFCLE 240
           ++   +     N GDSR +L    +         T D KP+ P E ERI    G V    
Sbjct: 131 VLISPQHTYFINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-- 183

Query: 241 DEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYGLISVPEVTQRHIT-SRDQFVVLATDGV 299
                    L      G    +        +  +   PEV     +   DQF++LA DG+
Sbjct: 184 ---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 240

Query: 300 WDVISNQEAIQIVSSTPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSP 356
           WDV+ N+E    V S        +++    V     K    + D++S I + F ++P
Sbjct: 241 WDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG---SRDNMSVILICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query368
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-54  Score=402.37  Aligned_cols=257  Identities=27%  Similarity=0.352  Sum_probs=217.4

Q ss_pred             eEEEEeecCCCCCCCceeEeecccCC-CCCeeEEEEEeCCCcChHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCCccccc
Q 017682           60 FAAVFSKRGEKGVNQDCAIVWEEFGC-QADMMFCGIFDGHGPWGHFVAKKVRESMPSSLLCNWQETLAEASLLPDIDLDS  138 (368)
Q Consensus        60 ~~~~~s~~G~R~~nED~~~v~~~~~~-~~~~~l~gV~DGhGg~G~~aa~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  138 (368)
                      -+|+++.+|+|++|||++++...+.. .++..|||||||||  |+.+|+++++.|+..|.+.......            
T Consensus        22 ~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~------------   87 (295)
T d1a6qa2          22 RYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGS------------   87 (295)
T ss_dssp             EEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCS------------
T ss_pred             EEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhccc------------
Confidence            36899999999999999988776532 35678999999999  9999999999999998875442111            


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHhc--ccCCCCCCCceEEEEEEECCEEEEEEecCCceEEEEeCCCCceeEEEcCC
Q 017682          139 DKKTHRFNIWKHSYVKTCAAVDQELEQH--RQIDSFYSGTTALTIVRQGEFIMVANVGDSRAVLATTSEDGSLVPVQLTV  216 (368)
Q Consensus       139 ~~~~~~~~~~~~~l~~a~~~~d~~l~~~--~~~~~~~~GtTa~~~~i~~~~l~vanvGDSRa~l~~~~~~g~l~~~~LT~  216 (368)
                       ......+.+++++.++|.++++.+...  .......+|||++++++.++++|+|||||||+|++++   |  .+++||.
T Consensus        88 -~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~---~--~~~~lT~  161 (295)
T d1a6qa2          88 -AGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN---R--KVHFFTQ  161 (295)
T ss_dssp             -SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEET---T--EEEEECC
T ss_pred             -cccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec---c--cceeecc
Confidence             012234578888999999998887542  2234456999999999999999999999999999998   8  5599999


Q ss_pred             CCCCCChhHHHHHHHCCCeEEeecCCCCceeeecCCCCCCcccccccccCcccccCC--------ceecccEEEEEec-C
Q 017682          217 DFKPNLPYEAERIIQCKGRVFCLEDEPGVHRVWLPNEECPGLAMSRAFGDYCVKDYG--------LISVPEVTQRHIT-S  287 (368)
Q Consensus       217 DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~~l~~sRa~Gd~~~k~~g--------v~~~Pdv~~~~l~-~  287 (368)
                      ||+|.++.|++||.+.||.+..             .+..+.+++||||||+.+|..+        ++++|+|..+++. +
T Consensus       162 dH~~~~~~E~~Ri~~~gg~v~~-------------~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~  228 (295)
T d1a6qa2         162 DHKPSNPLEKERIQNAGGSVMI-------------QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEE  228 (295)
T ss_dssp             CCCTTSHHHHHHHHHTTCCEET-------------TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTT
T ss_pred             ccCcccHHHHhhHhhcCCcccc-------------cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecc
Confidence            9999999999999999999863             2235779999999999998654        8999999999986 4


Q ss_pred             CCeEEEEEcCCCccCcCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHHHhhCCCCCCCceEEEEEEcCCCC
Q 017682          288 RDQFVVLATDGVWDVISNQEAIQIVSS----TPNRAKSAKRLVECAVHAWKRKRKGIAMDDISAICLFFHSSP  356 (368)
Q Consensus       288 ~d~fliLaSDGlwd~l~~~ei~~iv~~----~~~~~~aa~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~~~~  356 (368)
                      +|+|||||||||||+|+++|++++++.    ..+++.+|+.|++.|+.+       ++.||||||||+|+..|
T Consensus       229 ~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         229 DDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSRDNMSVILICFPNAP  294 (295)
T ss_dssp             TEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCCSCEEEEEEECTTSC
T ss_pred             cceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCeEEEEEeccCCC
Confidence            578999999999999999999999865    367999999999999987       78999999999998665
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure