Query 017694
Match_columns 367
No_of_seqs 288 out of 1045
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 03:28:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017694.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017694hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 2.9E-40 1E-44 276.3 7.5 95 43-137 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 2.3E-39 8E-44 278.5 5.6 99 42-140 14-123 (125)
3 3hts_B Heat shock transcriptio 100.0 2.2E-33 7.4E-38 233.8 1.8 82 41-122 8-100 (102)
4 1gvj_A C-ETS-1 protein, P54; t 88.2 0.045 1.5E-06 48.0 -2.0 79 42-120 36-119 (146)
5 1awc_A Protein (GA binding pro 87.7 0.17 5.8E-06 42.4 1.3 57 51-107 6-63 (110)
6 1fli_A FLI-1; transcription/DN 87.3 0.24 8.1E-06 40.7 1.9 64 44-107 4-68 (98)
7 1bc8_C SAP-1, protein (SAP-1 E 85.8 0.29 1E-05 39.8 1.7 76 45-120 4-84 (93)
8 2ypr_A Protein FEV; transcript 85.5 0.32 1.1E-05 40.2 1.8 76 44-119 6-86 (102)
9 4avp_A ETS translocation varia 84.6 0.41 1.4E-05 39.8 2.1 77 43-119 9-90 (106)
10 2nny_A C-ETS-1 protein, P54; p 83.8 0.11 3.7E-06 46.6 -1.9 78 42-119 61-143 (171)
11 2jee_A YIIU; FTSZ, septum, coi 82.2 9 0.00031 30.3 8.8 24 161-184 25-48 (81)
12 2dao_A Transcription factor ET 80.4 0.54 1.8E-05 39.8 1.2 77 43-119 6-88 (118)
13 3tnu_B Keratin, type II cytosk 78.2 28 0.00095 28.9 11.3 55 161-215 34-88 (129)
14 3jtg_A ETS-related transcripti 75.3 0.92 3.1E-05 37.5 1.2 73 47-119 6-85 (103)
15 1hbx_G ETS-domain protein ELK- 74.6 0.94 3.2E-05 40.0 1.1 76 45-120 5-85 (157)
16 1wwx_A E74-like factor 5 ESE-2 73.9 1.5 5E-05 36.5 2.1 76 43-119 6-88 (107)
17 2lf8_A Transcription factor ET 75.8 0.68 2.3E-05 39.6 0.0 58 49-106 8-67 (128)
18 4dzn_A Coiled-coil peptide CC- 73.4 4.2 0.00014 26.3 3.7 24 161-184 7-30 (33)
19 2yy0_A C-MYC-binding protein; 73.2 6.8 0.00023 28.4 5.3 32 162-193 18-49 (53)
20 1yo5_C SAM pointed domain cont 69.6 1.4 4.6E-05 36.1 0.9 67 43-109 8-77 (97)
21 1pue_E Protein (transcription 66.9 1.7 5.7E-05 35.0 0.9 58 50-107 6-68 (89)
22 1deb_A APC protein, adenomatou 65.2 29 0.001 25.1 7.1 38 165-202 5-42 (54)
23 3i00_A HIP-I, huntingtin-inter 64.6 61 0.0021 27.1 10.2 41 161-201 13-57 (120)
24 2wt7_A Proto-oncogene protein 63.4 15 0.00051 27.1 5.5 29 161-189 28-56 (63)
25 2w83_C C-JUN-amino-terminal ki 60.9 11 0.00036 29.6 4.4 40 161-200 35-74 (77)
26 1t2k_D Cyclic-AMP-dependent tr 60.3 16 0.00054 26.7 5.2 30 161-190 27-56 (61)
27 2wt7_B Transcription factor MA 60.3 19 0.00065 28.9 6.0 40 163-202 48-87 (90)
28 3tnu_A Keratin, type I cytoske 57.0 84 0.0029 26.1 11.0 55 161-215 36-90 (131)
29 3hnw_A Uncharacterized protein 56.1 71 0.0024 27.1 9.3 44 161-204 66-109 (138)
30 3oja_B Anopheles plasmodium-re 54.9 1.1E+02 0.0036 30.7 12.0 19 161-179 468-486 (597)
31 3he5_B Synzip2; heterodimeric 54.8 35 0.0012 24.0 5.8 37 161-197 8-44 (52)
32 3e98_A GAF domain of unknown f 54.5 41 0.0014 31.1 8.2 78 118-223 41-118 (252)
33 3hnw_A Uncharacterized protein 54.4 51 0.0017 28.1 8.1 50 160-209 72-121 (138)
34 3uux_B Mitochondrial division 53.1 99 0.0034 28.9 10.4 73 165-237 151-223 (242)
35 4dzn_A Coiled-coil peptide CC- 51.9 27 0.00092 22.6 4.4 24 163-186 2-25 (33)
36 2yy0_A C-MYC-binding protein; 51.6 28 0.00096 25.1 5.1 28 171-198 20-47 (53)
37 4gkw_A Spindle assembly abnorm 50.6 69 0.0023 27.7 8.2 45 163-207 46-90 (167)
38 1wt6_A Myotonin-protein kinase 50.5 66 0.0023 25.3 7.4 39 161-203 19-57 (81)
39 1a93_B MAX protein, coiled coi 47.5 29 0.00099 23.2 4.2 22 169-190 6-27 (34)
40 3a7p_A Autophagy protein 16; c 47.3 1.2E+02 0.0042 26.4 9.5 48 163-210 68-129 (152)
41 1wt6_A Myotonin-protein kinase 46.6 72 0.0025 25.1 7.1 39 172-210 16-57 (81)
42 3q8t_A Beclin-1; autophagy, AT 46.5 1.1E+02 0.0037 24.3 11.8 50 160-209 8-57 (96)
43 1deb_A APC protein, adenomatou 46.2 80 0.0027 22.9 6.7 43 161-203 8-50 (54)
44 3m48_A General control protein 46.2 23 0.00077 23.5 3.5 24 161-184 5-28 (33)
45 1uix_A RHO-associated kinase; 45.8 1E+02 0.0034 23.7 9.4 14 163-176 4-17 (71)
46 4etp_A Kinesin-like protein KA 45.6 65 0.0022 31.8 8.5 41 165-205 5-45 (403)
47 2xu6_A MDV1 coiled coil; prote 45.4 31 0.0011 26.6 4.8 41 161-201 26-66 (72)
48 1jnm_A Proto-oncogene C-JUN; B 44.4 17 0.00057 26.7 3.1 29 161-189 27-55 (62)
49 3na7_A HP0958; flagellar bioge 44.0 93 0.0032 28.4 8.8 12 320-331 207-218 (256)
50 3bj4_A Potassium voltage-gated 42.6 43 0.0015 24.0 4.8 32 188-219 14-45 (49)
51 3cue_D Transport protein parti 42.5 19 0.00065 32.4 3.7 63 45-108 86-157 (193)
52 3ghg_A Fibrinogen alpha chain; 41.8 63 0.0021 33.6 7.7 47 195-247 114-160 (562)
53 1ci6_A Transcription factor AT 41.5 43 0.0015 24.7 4.9 26 161-186 28-53 (63)
54 3oja_B Anopheles plasmodium-re 41.2 1.1E+02 0.0038 30.6 9.6 43 163-205 509-551 (597)
55 1c1g_A Tropomyosin; contractIl 40.4 1.1E+02 0.0038 26.0 8.3 20 164-183 14-33 (284)
56 1kd8_B GABH BLL, GCN4 acid bas 40.3 54 0.0019 22.1 4.7 26 161-186 6-31 (36)
57 1hjb_A Ccaat/enhancer binding 39.9 39 0.0013 26.8 4.8 17 178-194 44-60 (87)
58 2dgc_A Protein (GCN4); basic d 38.9 23 0.00078 26.3 3.1 26 161-186 35-60 (63)
59 3c3g_A Alpha/beta peptide with 37.3 38 0.0013 22.4 3.5 24 161-184 5-28 (33)
60 3c3f_A Alpha/beta peptide with 36.3 40 0.0014 22.4 3.5 24 161-184 6-29 (34)
61 1nkp_A C-MYC, MYC proto-oncoge 35.8 66 0.0023 25.1 5.5 34 163-196 52-85 (88)
62 1nkp_B MAX protein, MYC proto- 34.7 44 0.0015 25.5 4.2 29 165-193 49-77 (83)
63 2oxj_A Hybrid alpha/beta pepti 34.4 44 0.0015 22.2 3.5 24 161-184 6-29 (34)
64 2v66_B Nuclear distribution pr 34.3 1.9E+02 0.0066 23.8 8.3 44 172-215 37-80 (111)
65 4etp_A Kinesin-like protein KA 34.0 1.1E+02 0.0039 30.1 8.1 33 172-204 5-37 (403)
66 2jee_A YIIU; FTSZ, septum, coi 33.9 1.7E+02 0.0058 22.9 9.5 35 161-195 11-45 (81)
67 4emc_A Monopolin complex subun 33.8 1.5E+02 0.0052 26.7 8.1 16 165-180 22-37 (190)
68 1kd8_A GABH AIV, GCN4 acid bas 33.0 83 0.0028 21.2 4.7 26 161-186 6-31 (36)
69 2v71_A Nuclear distribution pr 32.7 2.1E+02 0.0073 25.6 9.0 38 172-209 90-127 (189)
70 1lwu_C Fibrinogen gamma chain; 32.5 1.1E+02 0.0038 29.6 7.6 34 175-208 10-43 (323)
71 3mq7_A Bone marrow stromal ant 32.1 69 0.0024 26.9 5.2 25 172-196 73-97 (121)
72 3ra3_B P2F; coiled coil domain 31.8 39 0.0013 21.1 2.7 19 165-183 2-20 (28)
73 1uo4_A General control protein 31.3 53 0.0018 21.8 3.5 24 161-184 6-29 (34)
74 2wq1_A General control protein 31.3 59 0.002 21.5 3.7 24 161-184 5-28 (33)
75 1g6u_A Domain swapped dimer; d 30.6 1.3E+02 0.0046 20.7 6.7 17 189-205 25-41 (48)
76 2bni_A General control protein 30.5 56 0.0019 21.7 3.5 24 161-184 6-29 (34)
77 1deq_A Fibrinogen (alpha chain 30.3 3.6E+02 0.012 26.8 10.8 12 235-246 151-162 (390)
78 1gd2_E Transcription factor PA 30.2 53 0.0018 25.0 3.9 30 161-190 34-63 (70)
79 3cvf_A Homer-3, homer protein 29.8 1.2E+02 0.004 23.7 5.9 27 189-215 25-51 (79)
80 1sz7_A BET3 homolog, trafficki 29.6 37 0.0013 30.8 3.4 64 45-109 83-154 (200)
81 3a7p_A Autophagy protein 16; c 29.5 2.8E+02 0.0097 24.1 10.7 25 166-190 64-88 (152)
82 2hy6_A General control protein 29.0 67 0.0023 21.4 3.7 24 161-184 6-29 (34)
83 2dq0_A Seryl-tRNA synthetase; 27.9 1.7E+02 0.0058 29.3 8.3 19 163-181 45-63 (455)
84 3uux_B Mitochondrial division 27.7 1.2E+02 0.0041 28.4 6.6 55 161-215 161-215 (242)
85 3qne_A Seryl-tRNA synthetase, 27.3 1.7E+02 0.0059 29.8 8.3 21 162-182 46-66 (485)
86 3ljm_A Coil Ser L9C; de novo d 27.0 91 0.0031 19.8 3.9 23 182-204 6-28 (31)
87 3u06_A Protein claret segregat 26.5 2.1E+02 0.0071 28.4 8.6 27 174-200 7-33 (412)
88 1ic2_A Tropomyosin alpha chain 26.5 2.1E+02 0.0072 21.7 7.9 49 161-209 25-73 (81)
89 3nkz_A Flagellar protein FLIT; 26.3 1.1E+02 0.0038 25.4 5.6 66 176-243 33-98 (123)
90 1go4_E MAD1 (mitotic arrest de 25.9 1.3E+02 0.0043 24.6 5.6 31 163-193 12-42 (100)
91 1nlw_A MAD protein, MAX dimeri 25.9 88 0.003 24.1 4.5 30 164-193 48-77 (80)
92 1gu4_A CAAT/enhancer binding p 25.8 93 0.0032 24.1 4.7 19 165-183 45-63 (78)
93 3m91_A Proteasome-associated A 25.6 1.7E+02 0.0059 20.9 5.7 31 163-193 16-46 (51)
94 1wle_A Seryl-tRNA synthetase; 25.2 2.8E+02 0.0096 28.2 9.4 18 122-139 44-62 (501)
95 4e61_A Protein BIM1; EB1-like 25.1 2.9E+02 0.0098 22.7 7.9 33 174-206 8-40 (106)
96 3efg_A Protein SLYX homolog; x 24.9 1.2E+02 0.004 23.4 5.1 14 188-201 46-59 (78)
97 2v66_B Nuclear distribution pr 24.9 2.9E+02 0.01 22.7 11.8 27 162-188 41-67 (111)
98 3ra3_A P1C; coiled coil domain 24.5 51 0.0018 20.6 2.3 20 167-186 4-23 (28)
99 3ghg_A Fibrinogen alpha chain; 24.4 1.1E+02 0.0039 31.7 6.2 38 167-204 114-151 (562)
100 1dh3_A Transcription factor CR 23.7 55 0.0019 23.6 2.8 23 161-183 27-49 (55)
101 3kqg_A Langerin, C-type lectin 23.5 1.1E+02 0.0038 25.5 5.2 13 161-173 4-16 (182)
102 2eqb_B RAB guanine nucleotide 22.8 3E+02 0.01 22.2 8.8 52 161-212 10-61 (97)
103 1s1c_X RHO-associated, coiled- 22.5 2.6E+02 0.009 21.3 8.8 9 165-173 8-16 (71)
104 3t97_C Nuclear pore glycoprote 22.4 2.2E+02 0.0076 21.1 6.0 36 172-214 14-49 (64)
105 1lwu_C Fibrinogen gamma chain; 22.1 2.4E+02 0.0084 27.2 7.9 44 167-210 9-52 (323)
106 3mtu_A Tropomyosin alpha-1 cha 21.8 2.3E+02 0.0078 21.5 6.2 16 165-180 4-19 (75)
107 1hjb_A Ccaat/enhancer binding 21.7 2.8E+02 0.0095 21.8 6.8 25 162-186 42-66 (87)
108 4emc_A Monopolin complex subun 21.7 4.4E+02 0.015 23.7 9.3 34 161-194 25-58 (190)
109 2zqm_A Prefoldin beta subunit 21.7 2.8E+02 0.0095 21.6 7.0 42 160-201 67-108 (117)
110 3u06_A Protein claret segregat 21.3 2.6E+02 0.0089 27.6 8.1 38 167-204 7-44 (412)
111 2ovc_A Potassium voltage-gated 21.3 68 0.0023 21.2 2.6 24 188-211 7-30 (33)
112 4ani_A Protein GRPE; chaperone 21.3 3.5E+02 0.012 24.6 8.4 40 163-202 59-98 (213)
113 1aq5_A Matrilin-1, CMP, cartil 21.2 1.8E+02 0.0063 20.6 5.0 23 177-199 23-45 (47)
114 2wt7_B Transcription factor MA 21.2 1.3E+02 0.0043 24.1 4.7 13 125-137 20-32 (90)
115 2r2v_A GCN4 leucine zipper; co 20.8 1.2E+02 0.0041 20.2 3.7 24 161-184 6-29 (34)
116 1jcd_A Major outer membrane li 20.6 2.4E+02 0.0083 20.2 6.7 41 161-201 9-49 (52)
117 3oja_A Leucine-rich immune mol 20.6 3E+02 0.01 26.7 8.5 17 167-183 414-430 (487)
118 2aze_A Transcription factor DP 20.5 3E+02 0.01 24.0 7.4 10 224-233 38-47 (155)
119 2dfs_A Myosin-5A; myosin-V, in 20.5 3.5E+02 0.012 30.1 9.7 8 163-170 960-967 (1080)
120 3a2a_A Voltage-gated hydrogen 20.4 2.6E+02 0.0089 20.5 6.3 25 162-186 10-34 (58)
121 2xdj_A Uncharacterized protein 20.4 3.1E+02 0.01 21.3 8.0 65 161-225 11-75 (83)
122 3s4r_A Vimentin; alpha-helix, 20.1 1.9E+02 0.0066 22.7 5.6 51 160-210 20-75 (93)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=2.9e-40 Score=276.31 Aligned_cols=95 Identities=46% Similarity=0.856 Sum_probs=91.7
Q ss_pred CCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCCCCCCCCcchHHhhhccccccccC----------
Q 017694 43 TGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFKHSNFSSFVRQLNTYGFRKID---------- 112 (367)
Q Consensus 43 ~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~~Fkh~nfsSFvRQLN~YGFrKv~---------- 112 (367)
+++|+||.|||+||+||+++++|+|+++|+||||+|+.+|+++|||+||||+||+|||||||+|||||+.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 5788999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCCceeecCCccccccccccccccc
Q 017694 113 PDRWEFSNEGFLRGERHLLKNIKRR 137 (367)
Q Consensus 113 ~d~~eF~h~~F~Rg~~~LL~~IkRk 137 (367)
++.|+|+|++|+||+++||.+||||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 5789999999999999999999997
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=278.53 Aligned_cols=99 Identities=48% Similarity=0.874 Sum_probs=94.6
Q ss_pred CCCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCCCCCCCCcchHHhhhccccccccC---------
Q 017694 42 DTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFKHSNFSSFVRQLNTYGFRKID--------- 112 (367)
Q Consensus 42 ~~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~~Fkh~nfsSFvRQLN~YGFrKv~--------- 112 (367)
..+.|+||.|||+||+||+++++|+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 14 ~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~~~~~~ 93 (125)
T 2ldu_A 14 PSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVK 93 (125)
T ss_dssp SCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCCSSSSS
T ss_pred CCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeecccccccc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred --CCCceeecCCccccccccccccccccCC
Q 017694 113 --PDRWEFSNEGFLRGERHLLKNIKRRKAP 140 (367)
Q Consensus 113 --~d~~eF~h~~F~Rg~~~LL~~IkRk~~~ 140 (367)
++.|+|+|++|+||+++||.+|+||++.
T Consensus 94 ~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~ 123 (125)
T 2ldu_A 94 PERDDTEFQHPCFLRGQEQLLENIKRKVTS 123 (125)
T ss_dssp CSSCCEEEECTTCBTTBGGGTTTSCCCTTS
T ss_pred CCCCccEEECccccCCCHHHHhhCcCCCCC
Confidence 4789999999999999999999999886
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=2.2e-33 Score=233.85 Aligned_cols=82 Identities=45% Similarity=0.848 Sum_probs=77.3
Q ss_pred CCCCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCCCCCCCCcchHHhhhccccccccC--------
Q 017694 41 HDTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPRHFKHSNFSSFVRQLNTYGFRKID-------- 112 (367)
Q Consensus 41 ~~~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~~Fkh~nfsSFvRQLN~YGFrKv~-------- 112 (367)
....+|+||.|||.||+||+++++|+|+++|++|||+|+..|+++|||+||||+||+||+||||+|||||+.
T Consensus 8 ~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g~~~ 87 (102)
T 3hts_B 8 GSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSML 87 (102)
T ss_dssp --CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC--------
T ss_pred CCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccCccc
Confidence 346789999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ---CCCceeecCC
Q 017694 113 ---PDRWEFSNEG 122 (367)
Q Consensus 113 ---~d~~eF~h~~ 122 (367)
+++|||+|++
T Consensus 88 ~~~~~~wEF~n~~ 100 (102)
T 3hts_B 88 SNNDSRWEFENER 100 (102)
T ss_dssp -CCSCCEEEEECC
T ss_pred CCCcCCeEecCCC
Confidence 7899999986
No 4
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=88.16 E-value=0.045 Score=47.96 Aligned_cols=79 Identities=22% Similarity=0.376 Sum_probs=59.3
Q ss_pred CCCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCC-CCCCCCcchHHhhhcccccc----ccCCCCc
Q 017694 42 DTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTYGFR----KIDPDRW 116 (367)
Q Consensus 42 ~~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~YGFr----Kv~~d~~ 116 (367)
..++.....=|.++|.|++..++|+|...+.-|.+.|+++.++..-.+ -=..-||...-|-|..|-=+ ||...+.
T Consensus 36 ~sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrl 115 (146)
T 1gvj_A 36 GSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY 115 (146)
T ss_dssp TCCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSS
T ss_pred CCCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeE
Confidence 456777888889999999999999999999999999999888743221 11356788999999888544 4555556
Q ss_pred eeec
Q 017694 117 EFSN 120 (367)
Q Consensus 117 eF~h 120 (367)
.|..
T Consensus 116 vY~F 119 (146)
T 1gvj_A 116 VYRF 119 (146)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6553
No 5
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=87.67 E-value=0.17 Score=42.38 Aligned_cols=57 Identities=19% Similarity=0.327 Sum_probs=44.1
Q ss_pred HHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCC-CCCCCCcchHHhhhcccc
Q 017694 51 KTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTYG 107 (367)
Q Consensus 51 KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~YG 107 (367)
=|.++|.||++.++|+|...+.-|.+.|+++.++.--.+ -=..-||...-|-|..|.
T Consensus 6 FLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 63 (110)
T 1awc_A 6 FLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHH
Confidence 367889999999999999988899999998887643221 113457888888888874
No 6
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=87.29 E-value=0.24 Score=40.68 Aligned_cols=64 Identities=17% Similarity=0.310 Sum_probs=47.7
Q ss_pred CCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhcccc
Q 017694 44 GPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYG 107 (367)
Q Consensus 44 ~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YG 107 (367)
+......=|.++|+|++..++|+|...+.-|.+.|+++.++.--. +-=..-||...-|-|..|-
T Consensus 4 g~~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY 68 (98)
T 1fli_A 4 GQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY 68 (98)
T ss_dssp SSCCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred CceeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHH
Confidence 344555566778899999999999998889999999888763321 1113567888888888874
No 7
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=85.79 E-value=0.29 Score=39.78 Aligned_cols=76 Identities=11% Similarity=0.296 Sum_probs=54.9
Q ss_pred CCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhccccc----cccCCCCceee
Q 017694 45 PPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYGF----RKIDPDRWEFS 119 (367)
Q Consensus 45 ~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 119 (367)
......=|.++|.||+..++|+|...+.-|.+.|+++.++.--. +-=..-||...-|-|..|-= +||...+..|.
T Consensus 4 ~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 4 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34555667889999999999999998789999999888774322 11145789999999988842 24454555555
Q ss_pred c
Q 017694 120 N 120 (367)
Q Consensus 120 h 120 (367)
.
T Consensus 84 F 84 (93)
T 1bc8_C 84 F 84 (93)
T ss_dssp E
T ss_pred e
Confidence 3
No 8
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=85.54 E-value=0.32 Score=40.17 Aligned_cols=76 Identities=18% Similarity=0.337 Sum_probs=54.4
Q ss_pred CCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhccccc----cccCCCCcee
Q 017694 44 GPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYGF----RKIDPDRWEF 118 (367)
Q Consensus 44 ~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YGF----rKv~~d~~eF 118 (367)
+.-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.--. +-=..-||..+-|-|..|-= +||...+..|
T Consensus 6 g~i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vY 85 (102)
T 2ypr_A 6 GQIQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAY 85 (102)
T ss_dssp SSCCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEE
T ss_pred CcEeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEE
Confidence 344555667788999999999999988899999999888863211 11145789999999988743 3555555555
Q ss_pred e
Q 017694 119 S 119 (367)
Q Consensus 119 ~ 119 (367)
.
T Consensus 86 k 86 (102)
T 2ypr_A 86 R 86 (102)
T ss_dssp E
T ss_pred E
Confidence 4
No 9
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=84.63 E-value=0.41 Score=39.80 Aligned_cols=77 Identities=18% Similarity=0.417 Sum_probs=55.7
Q ss_pred CCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhccccc----cccCCCCce
Q 017694 43 TGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYGF----RKIDPDRWE 117 (367)
Q Consensus 43 ~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YGF----rKv~~d~~e 117 (367)
.|.-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.--. +-=..-||..+-|-|..|-= +||...+..
T Consensus 9 ~g~i~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~v 88 (106)
T 4avp_A 9 RGSLQLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYV 88 (106)
T ss_dssp --CCCHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSE
T ss_pred CCcEeHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEE
Confidence 4455666777889999999999999998889999999888863321 11145789999999988742 355555655
Q ss_pred ee
Q 017694 118 FS 119 (367)
Q Consensus 118 F~ 119 (367)
|.
T Consensus 89 Yk 90 (106)
T 4avp_A 89 YK 90 (106)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 10
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=83.79 E-value=0.11 Score=46.61 Aligned_cols=78 Identities=22% Similarity=0.402 Sum_probs=57.4
Q ss_pred CCCCCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCC-CCCCCCcchHHhhhcccccc----ccCCCCc
Q 017694 42 DTGPPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTYGFR----KIDPDRW 116 (367)
Q Consensus 42 ~~~~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~YGFr----Kv~~d~~ 116 (367)
..++.....=|.++|.|++..++|+|...+.-|.+.|+++.++..-.+ -=..-||...-|-|..|-=+ ||...+.
T Consensus 61 ~sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrl 140 (171)
T 2nny_A 61 GSGPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRY 140 (171)
T ss_dssp TCSSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTT
T ss_pred CCCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeE
Confidence 345667777788999999999999999999999999998888743221 11346788888999888544 4444555
Q ss_pred eee
Q 017694 117 EFS 119 (367)
Q Consensus 117 eF~ 119 (367)
.|.
T Consensus 141 vY~ 143 (171)
T 2nny_A 141 VYR 143 (171)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 11
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=82.25 E-value=9 Score=30.31 Aligned_cols=24 Identities=25% Similarity=0.270 Sum_probs=14.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
+..||+.||.++..|..|...++.
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~ 48 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQH 48 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345666677776666666666433
No 12
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.39 E-value=0.54 Score=39.79 Aligned_cols=77 Identities=18% Similarity=0.369 Sum_probs=55.3
Q ss_pred CCCCchHHHHHhhccCCCCCCceEEcC-CCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhccc---c-ccccCCCCc
Q 017694 43 TGPPPFLTKTYEMVDDPNTNEVVSWSR-GGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTY---G-FRKIDPDRW 116 (367)
Q Consensus 43 ~~~~~Fl~KLy~mv~dp~~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~Y---G-FrKv~~d~~ 116 (367)
.+......=|.++|.||++.++|+|.. ++.-|.+.|++..++..=. +-=..-||...-|-|..| | -+|+...+.
T Consensus 6 ~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G~r~ 85 (118)
T 2dao_A 6 SGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPGQRL 85 (118)
T ss_dssp CCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSSSSS
T ss_pred CcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccCCeE
Confidence 345566677888999999999999987 4568999999887764322 111357899999999888 3 235555555
Q ss_pred eee
Q 017694 117 EFS 119 (367)
Q Consensus 117 eF~ 119 (367)
.|.
T Consensus 86 vY~ 88 (118)
T 2dao_A 86 LFR 88 (118)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 13
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=78.22 E-value=28 Score=28.94 Aligned_cols=55 Identities=22% Similarity=0.152 Sum_probs=41.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLA 215 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLa 215 (367)
...||..|++..+.|..|+..++.+...++..+..++.|....-..-+..+.-|-
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE 88 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELE 88 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999999888888888888877653333333334443
No 14
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=75.28 E-value=0.92 Score=37.46 Aligned_cols=73 Identities=11% Similarity=0.231 Sum_probs=49.5
Q ss_pred chHHHHHhhccCCC-CCCceEEcCC-CCeEEEeCCccchhcccC-CCCCCCCcchHHhhhccccc----cccCCCCceee
Q 017694 47 PFLTKTYEMVDDPN-TNEVVSWSRG-GVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYGF----RKIDPDRWEFS 119 (367)
Q Consensus 47 ~Fl~KLy~mv~dp~-~~~iIsWs~~-G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YGF----rKv~~d~~eF~ 119 (367)
....=|.++|.||+ ..++|+|... ..-|.+.|++..++.--. +-=..-||..+-|-|..|-= +||...+..|.
T Consensus 6 ~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~ 85 (103)
T 3jtg_A 6 HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYK 85 (103)
T ss_dssp SHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEE
T ss_pred cHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEE
Confidence 34455678899998 5689999974 558999999888864211 11146789999999988732 34444555544
No 15
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=74.57 E-value=0.94 Score=40.01 Aligned_cols=76 Identities=12% Similarity=0.305 Sum_probs=55.0
Q ss_pred CCchHHHHHhhccCCCCCCceEEcCCCCeEEEeCCccchhcccCC-CCCCCCcchHHhhhcccccc----ccCCCCceee
Q 017694 45 PPPFLTKTYEMVDDPNTNEVVSWSRGGVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTYGFR----KIDPDRWEFS 119 (367)
Q Consensus 45 ~~~Fl~KLy~mv~dp~~~~iIsWs~~G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~YGFr----Kv~~d~~eF~ 119 (367)
.-....=|.++|.|++..++|+|...+.-|.+.|+++.++..-.+ -=..-||...-|-|..|-=+ ||...+..|.
T Consensus 5 ~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 5 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 344556678899999999999999887899999998888743221 11457899999999888422 4455555655
Q ss_pred c
Q 017694 120 N 120 (367)
Q Consensus 120 h 120 (367)
.
T Consensus 85 F 85 (157)
T 1hbx_G 85 F 85 (157)
T ss_dssp E
T ss_pred e
Confidence 4
No 16
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=73.92 E-value=1.5 Score=36.54 Aligned_cols=76 Identities=16% Similarity=0.316 Sum_probs=53.2
Q ss_pred CCCCchHHHHHhhccCCC-CCCceEEcC-CCCeEEEeCCccchhcccCC-CCCCCCcchHHhhhcccc----ccccCCCC
Q 017694 43 TGPPPFLTKTYEMVDDPN-TNEVVSWSR-GGVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTYG----FRKIDPDR 115 (367)
Q Consensus 43 ~~~~~Fl~KLy~mv~dp~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~YG----FrKv~~d~ 115 (367)
.+......=|.++|.||+ ..++|+|.. +..-|.+.|+++.++.-=.+ -=..-||...-|-|..|- .+||. .+
T Consensus 6 ~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii~Kv~-~r 84 (107)
T 1wwx_A 6 SGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVD-RR 84 (107)
T ss_dssp CSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEECCS-SS
T ss_pred CCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecc-ce
Confidence 456677778889999986 567999987 46789999998887642211 113578899999998874 23443 55
Q ss_pred ceee
Q 017694 116 WEFS 119 (367)
Q Consensus 116 ~eF~ 119 (367)
..|.
T Consensus 85 lvY~ 88 (107)
T 1wwx_A 85 LVYK 88 (107)
T ss_dssp SEEE
T ss_pred EEEE
Confidence 5554
No 17
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=75.80 E-value=0.68 Score=39.65 Aligned_cols=58 Identities=16% Similarity=0.378 Sum_probs=39.7
Q ss_pred HHHHHhhccCCCCCCceEEcCC-CCeEEEeCCccchhcccCC-CCCCCCcchHHhhhccc
Q 017694 49 LTKTYEMVDDPNTNEVVSWSRG-GVSFVVWDPHAFSTSLLPR-HFKHSNFSSFVRQLNTY 106 (367)
Q Consensus 49 l~KLy~mv~dp~~~~iIsWs~~-G~sFvI~d~~~F~~~vLP~-~Fkh~nfsSFvRQLN~Y 106 (367)
-.=|.++|.|+++.++|+|... +.-|.+.|++..++.--.+ -=..-||...-|-|..|
T Consensus 8 WqFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyY 67 (128)
T 2lf8_A 8 WDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHY 67 (128)
Confidence 3446778999999999999884 4589999998777632221 11224566666766666
No 18
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=73.35 E-value=4.2 Score=26.34 Aligned_cols=24 Identities=29% Similarity=0.416 Sum_probs=12.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
+..||..||++..+|.-|+..|+|
T Consensus 7 lkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 7 LKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344555555555555555555544
No 19
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=73.18 E-value=6.8 Score=28.39 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 162 DGEFERLIRDKQFLMMELVKLRQQQQNTRAYL 193 (367)
Q Consensus 162 ~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l 193 (367)
..+++.|+.+++.|..++..|+++++.+..++
T Consensus 18 ~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 18 NPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888888888888888877776666554
No 20
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=69.59 E-value=1.4 Score=36.11 Aligned_cols=67 Identities=13% Similarity=0.195 Sum_probs=49.0
Q ss_pred CCCCchHHHHHhhccCCC-CCCceEEcC-CCCeEEEeCCccchhcccC-CCCCCCCcchHHhhhcccccc
Q 017694 43 TGPPPFLTKTYEMVDDPN-TNEVVSWSR-GGVSFVVWDPHAFSTSLLP-RHFKHSNFSSFVRQLNTYGFR 109 (367)
Q Consensus 43 ~~~~~Fl~KLy~mv~dp~-~~~iIsWs~-~G~sFvI~d~~~F~~~vLP-~~Fkh~nfsSFvRQLN~YGFr 109 (367)
.+......=|.++|.||+ ..++|+|.. ++.-|.+.|+++.++.-=. +-=..-||...-|-|..|--+
T Consensus 8 ~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~~ 77 (97)
T 1yo5_C 8 SQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYKK 77 (97)
T ss_dssp -CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTTT
T ss_pred CCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhc
Confidence 345566777889999986 478999984 6778999999888764322 111357899999999888544
No 21
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=66.90 E-value=1.7 Score=35.01 Aligned_cols=58 Identities=14% Similarity=0.279 Sum_probs=41.4
Q ss_pred HHHHhhccCCCCCCceEEcC-CCCeEEEe--CCccchhcccCC--CCCCCCcchHHhhhcccc
Q 017694 50 TKTYEMVDDPNTNEVVSWSR-GGVSFVVW--DPHAFSTSLLPR--HFKHSNFSSFVRQLNTYG 107 (367)
Q Consensus 50 ~KLy~mv~dp~~~~iIsWs~-~G~sFvI~--d~~~F~~~vLP~--~Fkh~nfsSFvRQLN~YG 107 (367)
.=|.++|.||++.++|+|.. +..-|-+. |+++.++.--.+ -=..-||...-|-|..|.
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY 68 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYG 68 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHH
Confidence 34678899999999999986 44668875 677777643221 112568899999998874
No 22
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=65.18 E-value=29 Score=25.13 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEG 202 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~ 202 (367)
.++|-++-+.|..|..+||++.++-..++..+|..--.
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~ 42 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASN 42 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhh
Confidence 45666777777777888888888777777776654433
No 23
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=64.64 E-value=61 Score=27.07 Aligned_cols=41 Identities=24% Similarity=0.327 Sum_probs=29.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNT----RAYLQAMELRLE 201 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~----~~~l~~Me~RL~ 201 (367)
-+..|+.|+++...|..|+.+++.+.+.. +.++..|+..|.
T Consensus 13 rD~~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~ 57 (120)
T 3i00_A 13 KDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLA 57 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999998887643 333344444443
No 24
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=63.38 E-value=15 Score=27.13 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=19.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNT 189 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~ 189 (367)
|..+++.|..++..|..||..|+.+...+
T Consensus 28 Le~~v~~L~~~n~~L~~ei~~L~~e~~~L 56 (63)
T 2wt7_A 28 LQAETDQLEDEKSALQTEIANLLKEKEKL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777777777777776665443
No 25
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=60.94 E-value=11 Score=29.60 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=22.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRL 200 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL 200 (367)
|...++.|.-++.+|..|+..+++-...+..++..||+.+
T Consensus 35 LI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeEl 74 (77)
T 2w83_C 35 LIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEEL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777777777777777777766655555555554443
No 26
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=60.33 E-value=16 Score=26.65 Aligned_cols=30 Identities=23% Similarity=0.217 Sum_probs=21.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTR 190 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~ 190 (367)
|+.+++.|..++..|..+|..|+.+...+.
T Consensus 27 Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk 56 (61)
T 1t2k_D 27 LEKKAEDLSSLNGQLQSEVTLLRNEVAQLK 56 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777777777777777777665443
No 27
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=60.33 E-value=19 Score=28.91 Aligned_cols=40 Identities=18% Similarity=0.200 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEG 202 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~ 202 (367)
.++..|..++..|+.|+..|+++...+..++.+|..+++.
T Consensus 48 ~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 48 QQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677778888888888888887777777777766653
No 28
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=56.96 E-value=84 Score=26.08 Aligned_cols=55 Identities=20% Similarity=0.114 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLA 215 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLa 215 (367)
...||..|++..+.|..|+..++.+...++..+..++.|....-..-+..+.-|-
T Consensus 36 ~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE 90 (131)
T 3tnu_A 36 GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVE 90 (131)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888999999999999999888888888888888877653333333334443
No 29
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=56.10 E-value=71 Score=27.14 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=20.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTE 204 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E 204 (367)
+-.++-.++++...|..++..+..+.++++.++.....++...+
T Consensus 66 iadEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~ 109 (138)
T 3hnw_A 66 IADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSA 109 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555554444444444444444444444444444333
No 30
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=54.93 E-value=1.1e+02 Score=30.72 Aligned_cols=19 Identities=26% Similarity=0.024 Sum_probs=7.4
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMEL 179 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El 179 (367)
+..++.+..+..+.+..++
T Consensus 468 l~~~~~~~~~~l~~~~~~i 486 (597)
T 3oja_B 468 LTNEQIQQEQLLQGLHAEI 486 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4444443333333333333
No 31
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=54.80 E-value=35 Score=24.03 Aligned_cols=37 Identities=24% Similarity=0.267 Sum_probs=19.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAME 197 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me 197 (367)
+...|.+||+|+-.|...-..|..-..+++.++..+|
T Consensus 8 lrkkiarlkkdnlqlerdeqnlekiianlrdeiarle 44 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLE 44 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHH
Confidence 4566777877776555444444433333444444333
No 32
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=54.45 E-value=41 Score=31.14 Aligned_cols=78 Identities=12% Similarity=0.201 Sum_probs=36.4
Q ss_pred eecCCccccccccccccccccCCCCCCCCCCCCCCccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 118 FSNEGFLRGERHLLKNIKRRKAPSQPLPPPQALGPCVELGRFGLDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAME 197 (367)
Q Consensus 118 F~h~~F~Rg~~~LL~~IkRk~~~s~~~~~qq~~~~~~Ev~~~~l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me 197 (367)
=.||.|--.+++||..++=..+.. +. + +| .-..+..||++...++.++..|.
T Consensus 41 ~~~PdFf~~~~~Ll~~L~lph~~~---------~a-V-----SL-------------~erQ~~~LR~r~~~Le~~L~~Li 92 (252)
T 3e98_A 41 SQHPEFFVEHDELIPELRIPHQPG---------DA-V-----SL-------------VERQVRLLRERNIEMRHRLSQLM 92 (252)
T ss_dssp ------------------------------------C-----HH-------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHhhCHHHHHhCCCCCCCC---------Cc-c-----cH-------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 379999999999999886432221 10 0 01 11235566777777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCcHH
Q 017694 198 LRLEGTEKKQQQMMSFLARAMQNPAF 223 (367)
Q Consensus 198 ~RL~~~E~kQqqmm~FLak~~qnp~f 223 (367)
+.-+..+....++..+..+++.-.+|
T Consensus 93 ~~A~~Ne~l~~~~~~l~l~LL~a~sl 118 (252)
T 3e98_A 93 DVARENDRLFDKTRRLVLDLLDATSL 118 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 88888888888888888887776544
No 33
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=54.44 E-value=51 Score=28.07 Aligned_cols=50 Identities=8% Similarity=0.029 Sum_probs=28.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 160 GLDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQ 209 (367)
Q Consensus 160 ~l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqq 209 (367)
.+..+++.|..+.+.+..|+..|+++...++.++......+..+..+.+.
T Consensus 72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~ 121 (138)
T 3hnw_A 72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINK 121 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666666666666666666666655555555555555544444333
No 34
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=53.10 E-value=99 Score=28.94 Aligned_cols=73 Identities=22% Similarity=0.276 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLARAMQNPAFLQQLVQQKEKRKEL 237 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLak~~qnp~fl~qLv~q~~~~k~l 237 (367)
+..|++..+.+..++..|-=+..-+..++..+..++..+..+++.++.-||.+=++-.||-.-+..-+.|.+.
T Consensus 151 l~~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief 223 (242)
T 3uux_B 151 PSALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDF 223 (242)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3568888888888777765555567788888899999999999999999999999988887777655555433
No 35
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=51.93 E-value=27 Score=22.56 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
+||..||++..+|..|+..|+=+.
T Consensus 2 geiaalkqeiaalkkeiaalkfei 25 (33)
T 4dzn_A 2 GEIAALKQEIAALKKEIAALKFEI 25 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667766666666666555443
No 36
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=51.56 E-value=28 Score=25.09 Aligned_cols=28 Identities=11% Similarity=0.267 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 171 DKQFLMMELVKLRQQQQNTRAYLQAMEL 198 (367)
Q Consensus 171 d~~~L~~El~~LRQqqq~~~~~l~~Me~ 198 (367)
|..+|..|+..||++...+..+++.+..
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555444444444444333
No 37
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=50.59 E-value=69 Score=27.67 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQ 207 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQ 207 (367)
+.+++|++-+.+-..|+.+||-+...++..+...+.-|...-..|
T Consensus 46 gKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lkrn~~qQ 90 (167)
T 4gkw_A 46 GKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRNSQQQ 90 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhHHH
Confidence 457788888888888888888887777777776666666544433
No 38
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=50.51 E-value=66 Score=25.35 Aligned_cols=39 Identities=28% Similarity=0.298 Sum_probs=25.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGT 203 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~ 203 (367)
|+.||. -++.+..||.++|-.++++..+|+.-+.|.+.+
T Consensus 19 LeaEIq----AKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL 57 (81)
T 1wt6_A 19 LEEEVL----TRQSLSREMEAIRTDNQNFASQLREAEARNRDL 57 (81)
T ss_dssp HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455553 467888888888877777766666555555444
No 39
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=47.52 E-value=29 Score=23.18 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 017694 169 IRDKQFLMMELVKLRQQQQNTR 190 (367)
Q Consensus 169 Krd~~~L~~El~~LRQqqq~~~ 190 (367)
++.+++..++|-.|+.|...++
T Consensus 6 RrKn~a~qqDIddlkrQN~~Le 27 (34)
T 1a93_B 6 RRKNDTHQQDIDDLKRQNALLE 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHhhHHHHHHHHHHHH
Confidence 4445555555555554443333
No 40
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=47.31 E-value=1.2e+02 Score=26.42 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLR--------------QQQQNTRAYLQAMELRLEGTEKKQQQM 210 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LR--------------Qqqq~~~~~l~~Me~RL~~~E~kQqqm 210 (367)
..|..|+.+...|..++..+. .++..+..++..++++++.++...+++
T Consensus 68 ~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~L 129 (152)
T 3a7p_A 68 NTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQL 129 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555554443 334445555555666666555554443
No 41
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=46.55 E-value=72 Score=25.14 Aligned_cols=39 Identities=18% Similarity=0.291 Sum_probs=22.1
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVK---LRQQQQNTRAYLQAMELRLEGTEKKQQQM 210 (367)
Q Consensus 172 ~~~L~~El~~---LRQqqq~~~~~l~~Me~RL~~~E~kQqqm 210 (367)
+.+|..||.. +..+...++.-..+.+.+|+..|.+.+.+
T Consensus 16 QSALeaEIqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL 57 (81)
T 1wt6_A 16 QEALEEEVLTRQSLSREMEAIRTDNQNFASQLREAEARNRDL 57 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666642 33344445555566666777666666555
No 42
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=46.48 E-value=1.1e+02 Score=24.35 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=41.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 160 GLDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQ 209 (367)
Q Consensus 160 ~l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqq 209 (367)
.+..++..|+.+-..|..||..|..+...+...|.+.+...+.....-.+
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~ 57 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQ 57 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 36788899999999999999999999999999998888877766554433
No 43
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=46.17 E-value=80 Score=22.87 Aligned_cols=43 Identities=19% Similarity=0.074 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGT 203 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~ 203 (367)
|-.+++.||+++..|.+|+..--.+.-.++++-..|.+-++.+
T Consensus 8 L~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 8 LLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 5567899999999999999988888777777777777765543
No 44
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=46.16 E-value=23 Score=23.51 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=20.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-.++..|..||.+|+.
T Consensus 5 LE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 788899999999999999988874
No 45
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=45.77 E-value=1e+02 Score=23.71 Aligned_cols=14 Identities=21% Similarity=0.299 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLM 176 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~ 176 (367)
..|+.|..+++.|.
T Consensus 4 k~v~~l~~E~eel~ 17 (71)
T 1uix_A 4 SDVANLANEKEELN 17 (71)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 34444444444443
No 46
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=45.60 E-value=65 Score=31.80 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEK 205 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~ 205 (367)
++.|+.+...|..++..+.++...++.++..+.+++...|.
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 45 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEET 45 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444455555555555555555555555554443
No 47
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=45.41 E-value=31 Score=26.65 Aligned_cols=41 Identities=24% Similarity=0.359 Sum_probs=18.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLE 201 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~ 201 (367)
++.+|++|+.-++.+..-++.+.|..-.++..+..++.||.
T Consensus 26 ID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle 66 (72)
T 2xu6_A 26 IEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLD 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34444555555555555555555544444444444444443
No 48
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=44.44 E-value=17 Score=26.66 Aligned_cols=29 Identities=21% Similarity=0.178 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNT 189 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~ 189 (367)
|+.+++.|..++..|..+|..|+.+...+
T Consensus 27 Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 27 LEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777777777777777665443
No 49
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=43.98 E-value=93 Score=28.44 Aligned_cols=12 Identities=25% Similarity=0.642 Sum_probs=7.9
Q ss_pred cCChHHHHHHhc
Q 017694 320 ELDEGFWEELLN 331 (367)
Q Consensus 320 ~~~d~fweell~ 331 (367)
.|+...+-++..
T Consensus 207 ~lppq~~~~i~~ 218 (256)
T 3na7_A 207 RLNDKIYTEVLT 218 (256)
T ss_dssp BCCHHHHHHHHH
T ss_pred eeCHHHHHHHHC
Confidence 566777776664
No 50
>3bj4_A Potassium voltage-gated channel subfamily KQT member 1; coiled coil, alternative splicing, deafness, disease mutation, glycoprotein, ION transport; 2.00A {Homo sapiens}
Probab=42.57 E-value=43 Score=24.03 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017694 188 NTRAYLQAMELRLEGTEKKQQQMMSFLARAMQ 219 (367)
Q Consensus 188 ~~~~~l~~Me~RL~~~E~kQqqmm~FLak~~q 219 (367)
++-.++..+|+.+..|++|-.+|+..+..+++
T Consensus 14 S~~~Rl~rVE~qV~~md~KLd~l~~~~~~~l~ 45 (49)
T 3bj4_A 14 TIGARLNRVEDKVTQLDQRLALITDMLHQLLS 45 (49)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777777788888887777777665443
No 51
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=42.47 E-value=19 Score=32.41 Aligned_cols=63 Identities=17% Similarity=0.353 Sum_probs=48.8
Q ss_pred CCchHHH-HHhhccCCCCCCceEEcCCCCeEEE-eCCccchhcc-cCCCC-CCCCcchHHhh-----hccccc
Q 017694 45 PPPFLTK-TYEMVDDPNTNEVVSWSRGGVSFVV-WDPHAFSTSL-LPRHF-KHSNFSSFVRQ-----LNTYGF 108 (367)
Q Consensus 45 ~~~Fl~K-Ly~mv~dp~~~~iIsWs~~G~sFvI-~d~~~F~~~v-LP~~F-kh~nfsSFvRQ-----LN~YGF 108 (367)
...||.| +|.++=.-.- +...|+++++.|+| .|..-+..-| +|+.. ..-+|++|+.= |.+-||
T Consensus 86 ~l~fI~k~~Wk~lfgk~~-d~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 86 TSEVLSKCAFKIFLNITP-NITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHHHSSCCC-CCBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCC-ccceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 3578855 7988866644 47789999999999 7877766554 78776 66789999865 788899
No 52
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=41.78 E-value=63 Score=33.59 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhcccccC
Q 017694 195 AMELRLEGTEKKQQQMMSFLARAMQNPAFLQQLVQQKEKRKELEEAMTKKRRR 247 (367)
Q Consensus 195 ~Me~RL~~~E~kQqqmm~FLak~~qnp~fl~qLv~q~~~~k~l~~~~~kKRr~ 247 (367)
.|++|+..++.+.+.-+.- .++||+ -|..++.. -+.||-+|..|+|-
T Consensus 114 ELRRrIqyLKekVdnQlsn-IrvLQs--nLedq~~k---IQRLEvDIdiqirs 160 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQH-IQLLQK--NVRAQLVD---MKRLEVDIDIKIRS 160 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHH---HHHHHHHHHHHHHh
Confidence 6777777777776555533 355653 33333332 23466667666653
No 53
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=41.50 E-value=43 Score=24.69 Aligned_cols=26 Identities=23% Similarity=0.276 Sum_probs=12.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
+..+++.|+.++..|..+|..|+.+.
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~E~ 53 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAKEI 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555554444443
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=41.19 E-value=1.1e+02 Score=30.56 Aligned_cols=43 Identities=19% Similarity=0.180 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEK 205 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~ 205 (367)
.++..++.+.+.+..++.+++++.+....+++.+++.+..+|+
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 551 (597)
T 3oja_B 509 KVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEK 551 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHH
Confidence 3344444444445555555444443333444433333333333
No 55
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=40.41 E-value=1.1e+02 Score=26.00 Aligned_cols=20 Identities=5% Similarity=-0.085 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017694 164 EFERLIRDKQFLMMELVKLR 183 (367)
Q Consensus 164 Ei~~LKrd~~~L~~El~~LR 183 (367)
+++.+......|..++..++
T Consensus 14 ~~~~~~~~~~~l~~~l~~l~ 33 (284)
T 1c1g_A 14 DKENALDRADEAEADKKAAE 33 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 56
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=40.31 E-value=54 Score=22.06 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=22.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
|+..++.|...+..|..||.+||.-.
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 77889999999999999999887654
No 57
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=39.89 E-value=39 Score=26.78 Aligned_cols=17 Identities=6% Similarity=0.300 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017694 178 ELVKLRQQQQNTRAYLQ 194 (367)
Q Consensus 178 El~~LRQqqq~~~~~l~ 194 (367)
++..|.++...++.++.
T Consensus 44 r~~~Le~EN~~Lr~~v~ 60 (87)
T 1hjb_A 44 KVLELTAENERLQKKVE 60 (87)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 58
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=38.94 E-value=23 Score=26.32 Aligned_cols=26 Identities=23% Similarity=0.402 Sum_probs=18.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
|+.+++.|+.++..|..|+..|+++.
T Consensus 35 Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 35 LEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777777777777776653
No 59
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=37.34 E-value=38 Score=22.42 Aligned_cols=24 Identities=4% Similarity=0.230 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-..+..|..||.+||.
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 677888888889999999988874
No 60
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=36.30 E-value=40 Score=22.43 Aligned_cols=24 Identities=8% Similarity=0.260 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-..+..|..||.+||.
T Consensus 6 LEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHH
Confidence 678888888888899989888874
No 61
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=35.82 E-value=66 Score=25.15 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAM 196 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~M 196 (367)
.-|..|+.....|..++..|+++++.+..+++.+
T Consensus 52 ~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456666777777777777777766665555443
No 62
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=34.66 E-value=44 Score=25.53 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLRQQQQNTRAYL 193 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LRQqqq~~~~~l 193 (367)
|..|+...+.|..|+..|++++..+..++
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555554444443
No 63
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=34.41 E-value=44 Score=22.22 Aligned_cols=24 Identities=21% Similarity=0.425 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-.++..|..||.+||.
T Consensus 6 LE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 6 LEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 678888888889999999888874
No 64
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=34.32 E-value=1.9e+02 Score=23.82 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLA 215 (367)
Q Consensus 172 ~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLa 215 (367)
...|..|+..||.....+..++..+|..-...|..-....+.|.
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLe 80 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLE 80 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHH
Confidence 45688888888888888888888888888888776666555554
No 65
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=34.03 E-value=1.1e+02 Score=30.09 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVKLRQQQQNTRAYLQAMELRLEGTE 204 (367)
Q Consensus 172 ~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E 204 (367)
...|..|+..|+++....+..+..++.+++.+.
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ 37 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELN 37 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666665555555555555555444
No 66
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=33.94 E-value=1.7e+02 Score=22.94 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=21.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQA 195 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~ 195 (367)
|+..|..+=.....|..|+..|+++...+..+.+.
T Consensus 11 LE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e 45 (81)
T 2jee_A 11 LEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQN 45 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556555556666666777777666655554444
No 67
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=33.81 E-value=1.5e+02 Score=26.73 Aligned_cols=16 Identities=19% Similarity=0.246 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELV 180 (367)
Q Consensus 165 i~~LKrd~~~L~~El~ 180 (367)
|..|..++..|.+++.
T Consensus 22 V~~L~~En~~L~~ql~ 37 (190)
T 4emc_A 22 VANLVNENFVLSEKLD 37 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 68
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=33.03 E-value=83 Score=21.16 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=22.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
|+.+++.|-..+..|..||.+||.-.
T Consensus 6 LE~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 6 LEAEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 77889999999999999999887654
No 69
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=32.73 E-value=2.1e+02 Score=25.63 Aligned_cols=38 Identities=16% Similarity=0.277 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQ 209 (367)
Q Consensus 172 ~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqq 209 (367)
...|..|+..|+.....+..++..+|..-..+|.+-..
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~ 127 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRA 127 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44455555555555555555555555554444444333
No 70
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=32.51 E-value=1.1e+02 Score=29.56 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 175 LMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQ 208 (367)
Q Consensus 175 L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQq 208 (367)
|..|+.++.....+...+++.|+..|..++.+.+
T Consensus 10 ~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~ 43 (323)
T 1lwu_C 10 ILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVT 43 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 3334444443333334444444444444433333
No 71
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=32.11 E-value=69 Score=26.94 Aligned_cols=25 Identities=20% Similarity=0.231 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVKLRQQQQNTRAYLQAM 196 (367)
Q Consensus 172 ~~~L~~El~~LRQqqq~~~~~l~~M 196 (367)
.+.|.-||..|.|+.++...++..+
T Consensus 73 vqeLqgEI~~Lnq~Lq~a~ae~erl 97 (121)
T 3mq7_A 73 VEELEGEITTLNHKLQDASAEVERL 97 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556666666665555555433
No 72
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=31.82 E-value=39 Score=21.06 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLR 183 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LR 183 (367)
|.+||..+..|.+|++.|.
T Consensus 2 irrlkqknarlkqeiaale 20 (28)
T 3ra3_B 2 IRRLKQKNARLKQEIAALE 20 (28)
T ss_dssp -CHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHHH
Confidence 3456655555555555443
No 73
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=31.33 E-value=53 Score=21.85 Aligned_cols=24 Identities=13% Similarity=0.329 Sum_probs=20.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|++.++.|-..+..|..||.+|+.
T Consensus 6 LEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 678888888888889889888864
No 74
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=31.27 E-value=59 Score=21.49 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=19.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-..+..|..||.+|+.
T Consensus 5 LEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 5 LEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 677888888888888888888764
No 75
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=30.59 E-value=1.3e+02 Score=20.73 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017694 189 TRAYLQAMELRLEGTEK 205 (367)
Q Consensus 189 ~~~~l~~Me~RL~~~E~ 205 (367)
++.+++++|.+|.....
T Consensus 25 leselqalekklaalks 41 (48)
T 1g6u_A 25 LESELQALEKKLAALKS 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444444333
No 76
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=30.53 E-value=56 Score=21.75 Aligned_cols=24 Identities=13% Similarity=0.498 Sum_probs=20.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-..+..|..||.+||.
T Consensus 6 LEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 6 IEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHH
Confidence 778888888899999999988874
No 77
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=30.28 E-value=3.6e+02 Score=26.81 Aligned_cols=12 Identities=42% Similarity=0.415 Sum_probs=6.3
Q ss_pred HHHHHHhccccc
Q 017694 235 KELEEAMTKKRR 246 (367)
Q Consensus 235 k~l~~~~~kKRr 246 (367)
+.||.+|..+||
T Consensus 151 qRLE~~Id~c~~ 162 (390)
T 1deq_A 151 KRLEVDIDIKIR 162 (390)
T ss_pred HHHHHHHHHHhc
Confidence 346666654444
No 78
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=30.22 E-value=53 Score=25.00 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=13.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTR 190 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~ 190 (367)
|+.++..|...+..|..|...|+++...+.
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~ 63 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLE 63 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444443333
No 79
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=29.78 E-value=1.2e+02 Score=23.71 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 189 TRAYLQAMELRLEGTEKKQQQMMSFLA 215 (367)
Q Consensus 189 ~~~~l~~Me~RL~~~E~kQqqmm~FLa 215 (367)
++.++..++.+|.....+|.++-.=|.
T Consensus 25 Le~~v~~le~~Le~s~~~q~~~~~Elk 51 (79)
T 3cvf_A 25 LEHQLRAMERSLEEARAERERARAEVG 51 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433333
No 80
>1sz7_A BET3 homolog, trafficking protein particle complex subunit 3; alpha-beta plait, trapp complex, palmitoylated, transport PR; HET: PLM; 1.55A {Homo sapiens} PDB: 2cfh_A* 2pwn_A* 3kxc_A* 1wc8_A* 2j3w_D* 2j3r_A* 2j3t_A* 1wc9_A* 2c0j_A*
Probab=29.62 E-value=37 Score=30.79 Aligned_cols=64 Identities=16% Similarity=0.337 Sum_probs=47.7
Q ss_pred CCchHHH-HHhhccCCCCCCceEEcCCCCeEEE-eCCccchhcc-cCCCCCCCCcchHHhh-----hcccccc
Q 017694 45 PPPFLTK-TYEMVDDPNTNEVVSWSRGGVSFVV-WDPHAFSTSL-LPRHFKHSNFSSFVRQ-----LNTYGFR 109 (367)
Q Consensus 45 ~~~Fl~K-Ly~mv~dp~~~~iIsWs~~G~sFvI-~d~~~F~~~v-LP~~Fkh~nfsSFvRQ-----LN~YGFr 109 (367)
...||.| +|.++=.-.- +...|+++++.|+| .|..-+..-| ||+-.+.-+|+.|+.= |.+-||.
T Consensus 83 ~l~fI~k~~Wk~lFgk~a-d~L~~t~~~~~Y~L~~D~nPL~~fvslP~~~~~l~y~~f~cGIIrGaL~~lg~~ 154 (200)
T 1sz7_A 83 TADVIAKVAFKMYLGITP-SITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMA 154 (200)
T ss_dssp HHHHHHHTHHHHHHSCCC-EEECCCTTSCEEEEEESSCTTCTTCCCCGGGTTCCTTTHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHHHhCCCC-ccceecCCCCEEEEEECCcHHHHhccCCccccCCchhhhHHHHHHHHHHhCCCE
Confidence 3478854 6888755433 57889999999999 7876665544 6876677789999865 7888998
No 81
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=29.46 E-value=2.8e+02 Score=24.11 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 166 ERLIRDKQFLMMELVKLRQQQQNTR 190 (367)
Q Consensus 166 ~~LKrd~~~L~~El~~LRQqqq~~~ 190 (367)
+.+......|..|+..++.+.....
T Consensus 64 ~~~~~~I~~L~~El~~l~~ki~dLe 88 (152)
T 3a7p_A 64 DALLNTLAILQKELKSKEQEIRRLK 88 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555554443
No 82
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=29.02 E-value=67 Score=21.35 Aligned_cols=24 Identities=21% Similarity=0.282 Sum_probs=20.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
|+..++.|-..+..|..||.+|+.
T Consensus 6 LEdkVEeLl~~~~~Le~eV~RL~~ 29 (34)
T 2hy6_A 6 LADAVEELASANYHLANAVARLAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 678888998999999999988874
No 83
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=27.86 E-value=1.7e+02 Score=29.33 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVK 181 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~ 181 (367)
.+++.|+.+++.+..+|.+
T Consensus 45 ~~~~~l~~~~n~~sk~i~~ 63 (455)
T 2dq0_A 45 KEINRLRHERNKIAVEIGK 63 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443
No 84
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=27.74 E-value=1.2e+02 Score=28.38 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=38.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLA 215 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLa 215 (367)
+..+++-|--.+.....||..+--+.+++..--+.+.+||..+|+..-.+-.-|.
T Consensus 161 i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~ 215 (242)
T 3uux_B 161 LVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLK 215 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4455666666777777888877777777777667777888887776655544443
No 85
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=27.31 E-value=1.7e+02 Score=29.78 Aligned_cols=21 Identities=10% Similarity=0.004 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 017694 162 DGEFERLIRDKQFLMMELVKL 182 (367)
Q Consensus 162 ~~Ei~~LKrd~~~L~~El~~L 182 (367)
..+++.|+.+++.+..+|..+
T Consensus 46 ~~~~~~l~~~rn~~sk~i~~~ 66 (485)
T 3qne_A 46 RFDLDEHNKKLNSVQKEIGKR 66 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445454444443
No 86
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=27.05 E-value=91 Score=19.82 Aligned_cols=23 Identities=35% Similarity=0.423 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 017694 182 LRQQQQNTRAYLQAMELRLEGTE 204 (367)
Q Consensus 182 LRQqqq~~~~~l~~Me~RL~~~E 204 (367)
|..+...++..++++|.+|..+|
T Consensus 6 lekkcaalesklqalekkleale 28 (31)
T 3ljm_A 6 LEKKCAALESKLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555666666655554
No 87
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=26.54 E-value=2.1e+02 Score=28.35 Aligned_cols=27 Identities=26% Similarity=0.257 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 174 FLMMELVKLRQQQQNTRAYLQAMELRL 200 (367)
Q Consensus 174 ~L~~El~~LRQqqq~~~~~l~~Me~RL 200 (367)
.|-.|+..++++...+..+++.+...+
T Consensus 7 ~l~~el~~~~~~~~~l~~~~~~~~~~~ 33 (412)
T 3u06_A 7 ALSTEVVHLRQRTEELLRCNEQQAAEL 33 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444343333333
No 88
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=26.45 E-value=2.1e+02 Score=21.66 Aligned_cols=49 Identities=18% Similarity=0.189 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQ 209 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqq 209 (367)
+..++.........+-.||..|....+.++..+...++||..+..+...
T Consensus 25 ~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLee 73 (81)
T 1ic2_A 25 AEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLEL 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 89
>3nkz_A Flagellar protein FLIT; structural genomics, PSI-2, protein structure initiative, MC midwest center for structural genomics; HET: MSE PG4; 2.11A {Yersinia enterocolitica subsp}
Probab=26.34 E-value=1.1e+02 Score=25.35 Aligned_cols=66 Identities=14% Similarity=0.107 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhcc
Q 017694 176 MMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLARAMQNPAFLQQLVQQKEKRKELEEAMTK 243 (367)
Q Consensus 176 ~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLak~~qnp~fl~qLv~q~~~~k~l~~~~~k 243 (367)
|.+|+.+...+-..-..+........-....|++....|.+++.|-.-|..|++..- .+|...++-
T Consensus 33 WD~Lv~lE~~y~~lVe~L~~~~~~~~ls~~~~~~~~~lL~~IL~nDaeIR~Ll~~rl--~eL~~li~~ 98 (123)
T 3nkz_A 33 WDALVDLEMTYLKAVESTANITISSCSSLMLQDLLREKLRAILDNEIEIKRLLQLRL--DRLSDLVGQ 98 (123)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHH
Confidence 556666665554333333332221111124456777889999999999999998643 445554443
No 90
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=25.92 E-value=1.3e+02 Score=24.55 Aligned_cols=31 Identities=23% Similarity=0.142 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYL 193 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l 193 (367)
.++..|++....|-.|..+|+++...++.+|
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888888888888888887776655555
No 91
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=25.86 E-value=88 Score=24.06 Aligned_cols=30 Identities=13% Similarity=0.278 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 164 EFERLIRDKQFLMMELVKLRQQQQNTRAYL 193 (367)
Q Consensus 164 Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l 193 (367)
-|..|+.+...|..|+..|+.++..+..+|
T Consensus 48 yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L 77 (80)
T 1nlw_A 48 HIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666666666665544443
No 92
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=25.80 E-value=93 Score=24.07 Aligned_cols=19 Identities=16% Similarity=0.186 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELVKLR 183 (367)
Q Consensus 165 i~~LKrd~~~L~~El~~LR 183 (367)
+..|..+|..|..+|..|+
T Consensus 45 ~~~L~~eN~~L~~~v~~L~ 63 (78)
T 1gu4_A 45 VLELTAENERLQKKVEQLS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444443333
No 93
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=25.64 E-value=1.7e+02 Score=20.89 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYL 193 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l 193 (367)
.++..|...|..|..-+...|++...+..++
T Consensus 16 ~~l~~L~~rN~rL~~~L~~AR~el~~Lkeel 46 (51)
T 3m91_A 16 ARIDSLAARNSKLMETLKEARQQLLALREEV 46 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444333
No 94
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=25.17 E-value=2.8e+02 Score=28.22 Aligned_cols=18 Identities=17% Similarity=0.043 Sum_probs=9.9
Q ss_pred Cccccccccc-cccccccC
Q 017694 122 GFLRGERHLL-KNIKRRKA 139 (367)
Q Consensus 122 ~F~Rg~~~LL-~~IkRk~~ 139 (367)
.|.|.+++.+ .++++|+.
T Consensus 44 ~~ir~n~~~v~~~l~~R~~ 62 (501)
T 1wle_A 44 ESLCAYPEDAARALDLRKG 62 (501)
T ss_dssp HHHHHSHHHHHHHHHHHTC
T ss_pred HHHHhCHHHHHHHHHHcCC
Confidence 4455566664 55655543
No 95
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=25.07 E-value=2.9e+02 Score=22.69 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 174 FLMMELVKLRQQQQNTRAYLQAMELRLEGTEKK 206 (367)
Q Consensus 174 ~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~k 206 (367)
+|.+|+...+++...+..++..+...+..+|+.
T Consensus 8 al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkE 40 (106)
T 4e61_A 8 AIQAELTKSQETIGSLNEEIEQYKGTVSTLEIE 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444455555555555443
No 96
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=24.89 E-value=1.2e+02 Score=23.36 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHHH
Q 017694 188 NTRAYLQAMELRLE 201 (367)
Q Consensus 188 ~~~~~l~~Me~RL~ 201 (367)
.+..++..|.+|++
T Consensus 46 ~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 46 RNAELIRHLLEDLG 59 (78)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 97
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=24.89 E-value=2.9e+02 Score=22.73 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=10.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 162 DGEFERLIRDKQFLMMELVKLRQQQQN 188 (367)
Q Consensus 162 ~~Ei~~LKrd~~~L~~El~~LRQqqq~ 188 (367)
..++..|+..+..|..-|-.|.|..-+
T Consensus 41 q~El~~lr~~~~~l~~~iReLEq~NDD 67 (111)
T 2v66_B 41 EDDLSQTRAIKEQLHKYVRELEQANDD 67 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 333444444444444444334333333
No 98
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=24.51 E-value=51 Score=20.55 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017694 167 RLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 167 ~LKrd~~~L~~El~~LRQqq 186 (367)
.|.-++.+|.+-++.|+|+.
T Consensus 4 alefendaleqkiaalkqki 23 (28)
T 3ra3_A 4 ALEFENDALEQKIAALKQKI 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhccHHHHHHHHHHHHHH
Confidence 34445555555555555554
No 99
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=24.38 E-value=1.1e+02 Score=31.74 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 167 RLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTE 204 (367)
Q Consensus 167 ~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E 204 (367)
.|++.++.|..+|...-++.+.++..|..+-..++.+|
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLE 151 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLE 151 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555554443443334333333333333333
No 100
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=23.70 E-value=55 Score=23.55 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=11.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLR 183 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LR 183 (367)
|+.++..|..+|..|..++..|+
T Consensus 27 LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 27 LENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555554444
No 101
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=23.54 E-value=1.1e+02 Score=25.48 Aligned_cols=13 Identities=23% Similarity=0.394 Sum_probs=2.4
Q ss_pred chHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQ 173 (367)
Q Consensus 161 l~~Ei~~LKrd~~ 173 (367)
|..+|+.||++.+
T Consensus 4 l~~~~~~l~~~~~ 16 (182)
T 3kqg_A 4 LNAQIPELKSDLE 16 (182)
T ss_dssp ---------CHHH
T ss_pred hhhhHHHHHHHHH
Confidence 5566677776655
No 102
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=22.79 E-value=3e+02 Score=22.19 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=38.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMS 212 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~ 212 (367)
+..++.+|..+....-.|+.+|+.....-...-...|.....+++.-..+-.
T Consensus 10 lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTa 61 (97)
T 2eqb_B 10 LKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTA 61 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888888888888888877777777677777777777766555433
No 103
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=22.51 E-value=2.6e+02 Score=21.35 Aligned_cols=9 Identities=33% Similarity=0.508 Sum_probs=3.3
Q ss_pred HHHHHHHHH
Q 017694 165 FERLIRDKQ 173 (367)
Q Consensus 165 i~~LKrd~~ 173 (367)
|+.|..+++
T Consensus 8 i~~l~~E~e 16 (71)
T 1s1c_X 8 IEILRRENE 16 (71)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333333333
No 104
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=22.35 E-value=2.2e+02 Score=21.15 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 172 KQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFL 214 (367)
Q Consensus 172 ~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FL 214 (367)
...|..++.++.+.|. .+++.|..++..|..+=.+|
T Consensus 14 I~~L~~~v~~~e~~Q~-------~ldq~Ld~Ie~QQ~ELe~~L 49 (64)
T 3t97_C 14 ITSLHREVEKVKLDQK-------RLDQELDFILSQQKELEDLL 49 (64)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 3456666666666654 34555555666666554444
No 105
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=22.12 E-value=2.4e+02 Score=27.16 Aligned_cols=44 Identities=9% Similarity=0.077 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 167 RLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQM 210 (367)
Q Consensus 167 ~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqm 210 (367)
+|..+...|..-|.....+.+.++..+..++.+|..++.+..++
T Consensus 9 ~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l 52 (323)
T 1lwu_C 9 KILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDI 52 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333434444444555555556666666666554444343
No 106
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=21.78 E-value=2.3e+02 Score=21.48 Aligned_cols=16 Identities=13% Similarity=0.306 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 017694 165 FERLIRDKQFLMMELV 180 (367)
Q Consensus 165 i~~LKrd~~~L~~El~ 180 (367)
++.+|+..++|..|.-
T Consensus 4 m~aiKkkmqaLk~Ekd 19 (75)
T 3mtu_A 4 MDAIKKKMQMLKLDKE 19 (75)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444433333
No 107
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=21.73 E-value=2.8e+02 Score=21.81 Aligned_cols=25 Identities=12% Similarity=0.173 Sum_probs=12.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 162 DGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 162 ~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
..++..|.++|..|..+|..|+.+.
T Consensus 42 ~~r~~~Le~EN~~Lr~~v~~L~~E~ 66 (87)
T 1hjb_A 42 QHKVLELTAENERLQKKVEQLSREL 66 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555444
No 108
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=21.72 E-value=4.4e+02 Score=23.69 Aligned_cols=34 Identities=21% Similarity=0.112 Sum_probs=18.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQ 194 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~ 194 (367)
|..|+..|..+......|+..|+.+.+..+.++.
T Consensus 25 L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~ 58 (190)
T 4emc_A 25 LVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK 58 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 4455555555555555555555555555544443
No 109
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=21.67 E-value=2.8e+02 Score=21.64 Aligned_cols=42 Identities=17% Similarity=0.232 Sum_probs=28.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 160 GLDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLE 201 (367)
Q Consensus 160 ~l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~ 201 (367)
..+.-+..|......|-.++.+|..+...+..++..++..|+
T Consensus 67 ~~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 67 TKDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566777777777777777777776666666665555544
No 110
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=21.32 E-value=2.6e+02 Score=27.63 Aligned_cols=38 Identities=16% Similarity=0.093 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 167 RLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTE 204 (367)
Q Consensus 167 ~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E 204 (367)
.|+.+...|...+..++++.+.+..++..++++|...+
T Consensus 7 ~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 44 (412)
T 3u06_A 7 ALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSN 44 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444445555555555556666666665544
No 111
>2ovc_A Potassium voltage-gated channel subfamily KQT MEM; potassium channel, ION channel assemb coiled-coil, tetramer, transport protein; 2.07A {Homo sapiens}
Probab=21.28 E-value=68 Score=21.18 Aligned_cols=24 Identities=13% Similarity=0.221 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 188 NTRAYLQAMELRLEGTEKKQQQMM 211 (367)
Q Consensus 188 ~~~~~l~~Me~RL~~~E~kQqqmm 211 (367)
++-.++..+|+.+..+++|-.+|+
T Consensus 7 Sm~~Rl~kVE~qv~~md~KLd~l~ 30 (33)
T 2ovc_A 7 SMMGRVVKVEKQVQSIEHKLDLLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666666665554
No 112
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=21.26 E-value=3.5e+02 Score=24.55 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 163 GEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEG 202 (367)
Q Consensus 163 ~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~ 202 (367)
.+++.|+.....|..++..++.+...+.+.+.++..|...
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~r 98 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQ 98 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777778888888887777777777777776653
No 113
>1aq5_A Matrilin-1, CMP, cartilage matrix protein; coiled-coil, heptad repeat, interchain disulfide bonds, oligomerization domain, trimer; NMR {Gallus gallus} SCOP: h.1.6.1
Probab=21.20 E-value=1.8e+02 Score=20.58 Aligned_cols=23 Identities=17% Similarity=0.228 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 017694 177 MELVKLRQQQQNTRAYLQAMELR 199 (367)
Q Consensus 177 ~El~~LRQqqq~~~~~l~~Me~R 199 (367)
..|..|.|++..+-.+|+++|.|
T Consensus 23 ~~l~~Lt~kL~~vt~rle~lEnr 45 (47)
T 1aq5_A 23 ELINTLQQKLEAVAKRIEALENK 45 (47)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455555554444444444443
No 114
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=21.19 E-value=1.3e+02 Score=24.10 Aligned_cols=13 Identities=31% Similarity=0.335 Sum_probs=6.1
Q ss_pred ccccccccccccc
Q 017694 125 RGERHLLKNIKRR 137 (367)
Q Consensus 125 Rg~~~LL~~IkRk 137 (367)
+.....|+.++|+
T Consensus 20 ~eev~~lKq~RRt 32 (90)
T 2wt7_B 20 KDEVIRLKQKRRT 32 (90)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3344445555554
No 115
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=20.77 E-value=1.2e+02 Score=20.17 Aligned_cols=24 Identities=13% Similarity=0.188 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQ 184 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQ 184 (367)
++..++.|-..+..|..||.+|+.
T Consensus 6 ledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 6 VADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567788888888888888887763
No 116
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=20.60 E-value=2.4e+02 Score=20.21 Aligned_cols=41 Identities=7% Similarity=-0.003 Sum_probs=21.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLE 201 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~ 201 (367)
|..++..|..+-..|..+|..+|...+..+.+-..--+||.
T Consensus 9 Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlD 49 (52)
T 1jcd_A 9 ASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRAD 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34555555555555555555555555555554444444443
No 117
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=20.58 E-value=3e+02 Score=26.75 Aligned_cols=17 Identities=6% Similarity=0.227 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017694 167 RLIRDKQFLMMELVKLR 183 (367)
Q Consensus 167 ~LKrd~~~L~~El~~LR 183 (367)
...+..+.+..|+...|
T Consensus 414 ~~~~~~~~~~~~~~~~~ 430 (487)
T 3oja_A 414 AIVKRYEEMYVEQQSVQ 430 (487)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33333444444444433
No 118
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=20.47 E-value=3e+02 Score=23.98 Aligned_cols=10 Identities=30% Similarity=0.587 Sum_probs=6.1
Q ss_pred HHHHHHHHHH
Q 017694 224 LQQLVQQKEK 233 (367)
Q Consensus 224 l~qLv~q~~~ 233 (367)
++.|++.+..
T Consensus 38 fknLv~RN~~ 47 (155)
T 2aze_A 38 FKNLVQRNRH 47 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4567776653
No 119
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=20.45 E-value=3.5e+02 Score=30.15 Aligned_cols=8 Identities=38% Similarity=0.335 Sum_probs=3.6
Q ss_pred HHHHHHHH
Q 017694 163 GEFERLIR 170 (367)
Q Consensus 163 ~Ei~~LKr 170 (367)
.|+..|++
T Consensus 960 ~e~~~L~~ 967 (1080)
T 2dfs_A 960 TETEKLRS 967 (1080)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444443
No 120
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=20.45 E-value=2.6e+02 Score=20.52 Aligned_cols=25 Identities=16% Similarity=0.132 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017694 162 DGEFERLIRDKQFLMMELVKLRQQQ 186 (367)
Q Consensus 162 ~~Ei~~LKrd~~~L~~El~~LRQqq 186 (367)
+.++.+||.-+..|..-|..|..+.
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c 34 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSC 34 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467777777777777777775554
No 121
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=20.40 E-value=3.1e+02 Score=21.32 Aligned_cols=65 Identities=15% Similarity=0.098 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcHHHH
Q 017694 161 LDGEFERLIRDKQFLMMELVKLRQQQQNTRAYLQAMELRLEGTEKKQQQMMSFLARAMQNPAFLQ 225 (367)
Q Consensus 161 l~~Ei~~LKrd~~~L~~El~~LRQqqq~~~~~l~~Me~RL~~~E~kQqqmm~FLak~~qnp~fl~ 225 (367)
++..+....+-.-.|...|..|+++...++-+++.....|..+.++|..+..=|-+.+..+...+
T Consensus 11 LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~~~~~~~ 75 (83)
T 2xdj_A 11 LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQ 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
No 122
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=20.13 E-value=1.9e+02 Score=22.74 Aligned_cols=51 Identities=14% Similarity=0.261 Sum_probs=31.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Q 017694 160 GLDGEFERLIRDKQFLMMELVKLRQQQQN-----TRAYLQAMELRLEGTEKKQQQM 210 (367)
Q Consensus 160 ~l~~Ei~~LKrd~~~L~~El~~LRQqqq~-----~~~~l~~Me~RL~~~E~kQqqm 210 (367)
++.+.|..|..+|..|..++..++++... -..+|..+...|..+...-.++
T Consensus 20 syIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l 75 (93)
T 3s4r_A 20 NLIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARV 75 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888888999998888877664321 1334555555555544443333
Done!