Query 017695
Match_columns 367
No_of_seqs 166 out of 1486
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 03:29:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017695.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017695hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_B PDHE1-B, pyruvate dehyd 100.0 3.2E-69 1.1E-73 524.8 29.5 327 35-362 13-340 (341)
2 1w85_B Pyruvate dehydrogenase 100.0 1.6E-68 5.4E-73 517.1 30.7 322 36-362 2-323 (324)
3 1umd_B E1-beta, 2-OXO acid deh 100.0 6.7E-68 2.3E-72 512.7 30.1 322 35-362 2-323 (324)
4 1ik6_A Pyruvate dehydrogenase; 100.0 5E-67 1.7E-71 514.0 27.8 320 35-362 49-368 (369)
5 2bfd_B 2-oxoisovalerate dehydr 100.0 5.9E-66 2E-70 502.3 29.4 328 26-362 11-341 (342)
6 1qs0_B 2-oxoisovalerate dehydr 100.0 1.4E-64 4.8E-69 492.2 29.4 321 35-362 3-337 (338)
7 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 3.6E-56 1.2E-60 465.0 29.8 300 36-364 321-625 (629)
8 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 1.1E-55 3.6E-60 461.0 31.0 299 35-362 317-620 (621)
9 3mos_A Transketolase, TK; thia 100.0 6.7E-56 2.3E-60 461.0 29.1 302 28-358 305-615 (616)
10 3l84_A Transketolase; TKT, str 100.0 5.9E-51 2E-55 423.5 25.3 284 35-359 336-631 (632)
11 3rim_A Transketolase, TK; TPP, 100.0 5.3E-51 1.8E-55 427.0 24.9 305 26-363 364-700 (700)
12 3m49_A Transketolase; alpha-be 100.0 3.5E-51 1.2E-55 428.5 23.5 301 27-361 370-690 (690)
13 3uk1_A Transketolase; structur 100.0 5.4E-51 1.8E-55 428.0 23.5 294 34-361 392-710 (711)
14 1itz_A Transketolase; calvin c 100.0 2.8E-49 9.7E-54 415.3 26.4 298 28-359 357-674 (675)
15 1gpu_A Transketolase; transfer 100.0 1.4E-49 4.7E-54 418.0 23.4 299 27-363 346-666 (680)
16 2r8o_A Transketolase 1, TK 1; 100.0 9.8E-50 3.3E-54 418.6 21.8 297 33-363 351-665 (669)
17 2e6k_A Transketolase; structur 100.0 1.1E-49 3.8E-54 417.0 20.3 291 34-361 346-651 (651)
18 3kom_A Transketolase; rossmann 100.0 4.1E-49 1.4E-53 412.0 24.3 295 34-361 352-663 (663)
19 1r9j_A Transketolase; domains, 100.0 2.2E-49 7.4E-54 415.8 22.2 292 34-363 349-657 (673)
20 2jgd_A 2-oxoglutarate dehydrog 100.0 1.1E-46 3.8E-51 403.9 21.5 310 35-358 589-930 (933)
21 2yic_A 2-oxoglutarate decarbox 100.0 4.9E-46 1.7E-50 396.9 18.4 303 42-355 520-865 (868)
22 2xt6_A 2-oxoglutarate decarbox 100.0 4.3E-45 1.5E-49 398.3 19.5 283 47-339 772-1095(1113)
23 2qtc_A Pyruvate dehydrogenase 100.0 8.3E-43 2.8E-47 372.7 24.9 303 34-363 489-858 (886)
24 3ahc_A Phosphoketolase, xylulo 100.0 1.6E-39 5.4E-44 342.2 19.5 305 36-362 428-786 (845)
25 1yd7_A 2-keto acid:ferredoxin 100.0 7.1E-30 2.4E-34 252.6 10.0 288 36-362 22-395 (395)
26 2c42_A Pyruvate-ferredoxin oxi 99.9 7.3E-20 2.5E-24 202.2 28.7 296 36-362 6-383 (1231)
27 3ju3_A Probable 2-oxoacid ferr 99.7 2E-17 6.7E-22 136.4 10.1 107 237-363 12-118 (118)
28 1v5e_A Pyruvate oxidase; oxido 94.1 0.29 9.8E-06 50.1 11.4 149 36-209 3-165 (590)
29 1ozh_A ALS, acetolactate synth 93.3 0.5 1.7E-05 48.0 11.3 151 37-208 11-170 (566)
30 2uz1_A Benzaldehyde lyase; thi 93.2 0.8 2.8E-05 46.3 12.7 151 36-208 3-164 (563)
31 3eya_A Pyruvate dehydrogenase 93.1 0.96 3.3E-05 45.6 13.1 152 37-208 3-162 (549)
32 1ybh_A Acetolactate synthase, 92.9 0.63 2.2E-05 47.4 11.6 152 37-208 12-172 (590)
33 2iht_A Carboxyethylarginine sy 92.5 0.5 1.7E-05 48.0 10.0 152 36-209 11-172 (573)
34 2nxw_A Phenyl-3-pyruvate decar 92.4 2.5 8.4E-05 42.8 15.0 153 37-210 21-188 (565)
35 2wvg_A PDC, pyruvate decarboxy 92.2 1.8 6.2E-05 43.8 13.8 152 37-208 3-169 (568)
36 2pan_A Glyoxylate carboligase; 92.1 1 3.5E-05 46.1 11.9 151 37-207 27-187 (616)
37 4feg_A Pyruvate oxidase; carba 91.8 1.3 4.6E-05 45.1 12.3 154 35-208 9-171 (603)
38 1t9b_A Acetolactate synthase, 91.6 2.1 7.1E-05 44.5 13.6 149 37-208 82-242 (677)
39 2vbi_A Pyruvate decarboxylase; 91.6 2 6.7E-05 43.5 13.2 152 37-208 3-169 (566)
40 2pgn_A Cyclohexane-1,2-dione h 91.1 0.9 3.1E-05 46.3 10.1 152 36-208 3-165 (589)
41 2vk8_A Pyruvate decarboxylase 90.8 2.4 8.1E-05 42.8 12.8 151 36-209 3-171 (563)
42 1q6z_A BFD, BFDC, benzoylforma 90.6 0.41 1.4E-05 48.1 6.9 148 38-208 3-161 (528)
43 2c31_A Oxalyl-COA decarboxylas 90.0 1.5 5.1E-05 44.4 10.6 154 35-209 8-172 (568)
44 2q28_A Oxalyl-COA decarboxylas 89.9 3.3 0.00011 41.7 13.0 152 36-208 7-169 (564)
45 3hww_A 2-succinyl-5-enolpyruvy 89.3 2.2 7.4E-05 43.1 11.1 111 85-207 48-170 (556)
46 1t9b_A Acetolactate synthase, 87.4 2.6 8.9E-05 43.8 10.4 150 41-204 464-632 (677)
47 1ovm_A Indole-3-pyruvate decar 87.1 5.5 0.00019 39.9 12.5 153 36-208 4-170 (552)
48 3lq1_A 2-succinyl-5-enolpyruvy 86.5 3 0.0001 42.3 10.1 112 84-207 50-177 (578)
49 2x7j_A 2-succinyl-5-enolpyruvy 85.5 3.7 0.00013 41.8 10.3 113 84-208 70-198 (604)
50 2vbf_A Branched-chain alpha-ke 85.0 3.9 0.00013 41.3 10.1 151 37-208 25-190 (570)
51 2lqo_A Putative glutaredoxin R 85.0 1.4 4.8E-05 33.5 5.2 73 239-316 4-82 (92)
52 1aba_A Glutaredoxin; electron 79.8 2.9 0.0001 30.6 5.2 66 241-307 2-81 (87)
53 3zyw_A Glutaredoxin-3; metal b 76.5 4.5 0.00015 31.5 5.6 65 238-307 15-87 (111)
54 3ipz_A Monothiol glutaredoxin- 73.8 3.3 0.00011 32.0 4.2 68 238-307 17-89 (109)
55 3m49_A Transketolase; alpha-be 71.6 13 0.00045 38.6 9.2 85 109-205 173-269 (690)
56 2wci_A Glutaredoxin-4; redox-a 71.2 5.5 0.00019 32.4 5.0 66 239-306 35-105 (135)
57 2o1s_A 1-deoxy-D-xylulose-5-ph 71.1 12 0.00042 38.2 8.8 30 175-204 247-279 (621)
58 3uk1_A Transketolase; structur 71.1 7.2 0.00025 40.8 7.0 85 109-205 188-283 (711)
59 1v5e_A Pyruvate oxidase; oxido 69.2 9.4 0.00032 38.7 7.4 110 83-204 403-534 (590)
60 3l84_A Transketolase; TKT, str 69.2 11 0.00036 38.9 7.8 97 96-205 119-238 (632)
61 3hww_A 2-succinyl-5-enolpyruvy 69.1 7.4 0.00025 39.1 6.5 97 97-204 422-534 (556)
62 1ozh_A ALS, acetolactate synth 68.9 8.9 0.00031 38.6 7.1 111 83-204 410-538 (566)
63 2c31_A Oxalyl-COA decarboxylas 68.8 11 0.00037 38.0 7.7 111 83-204 416-542 (568)
64 3eya_A Pyruvate dehydrogenase 68.7 12 0.00041 37.4 8.0 111 83-204 396-524 (549)
65 2e6k_A Transketolase; structur 67.2 16 0.00056 37.6 8.7 85 109-205 151-246 (651)
66 2o1x_A 1-deoxy-D-xylulose-5-ph 67.1 15 0.00052 37.6 8.5 30 175-204 252-284 (629)
67 3rpe_A MDAB, modulator of drug 66.7 19 0.00064 31.7 7.9 59 252-313 48-106 (218)
68 3lq1_A 2-succinyl-5-enolpyruvy 66.2 12 0.00043 37.6 7.5 35 169-204 521-555 (578)
69 3kom_A Transketolase; rossmann 65.2 14 0.00046 38.3 7.6 85 109-205 149-245 (663)
70 2wem_A Glutaredoxin-related pr 64.9 12 0.00042 29.4 5.8 65 238-307 19-92 (118)
71 1wik_A Thioredoxin-like protei 64.0 7.4 0.00025 29.8 4.2 67 238-306 14-85 (109)
72 1r9j_A Transketolase; domains, 62.7 29 0.00099 35.9 9.6 62 142-205 175-246 (673)
73 1q6z_A BFD, BFDC, benzoylforma 62.6 4.8 0.00016 40.2 3.6 111 83-204 392-520 (528)
74 2vzf_A NADH-dependent FMN redu 61.0 17 0.00058 30.9 6.4 66 247-313 16-92 (197)
75 2q62_A ARSH; alpha/beta, flavo 60.6 21 0.00073 31.9 7.2 61 251-313 52-121 (247)
76 2uz1_A Benzaldehyde lyase; thi 60.5 21 0.0007 35.8 7.9 110 83-204 409-541 (563)
77 2x7j_A 2-succinyl-5-enolpyruvy 60.4 5 0.00017 40.9 3.3 98 95-204 459-575 (604)
78 4dik_A Flavoprotein; TM0755, e 60.3 29 0.001 33.4 8.7 72 242-314 268-343 (410)
79 1ybh_A Acetolactate synthase, 60.1 14 0.00049 37.3 6.7 111 83-204 416-553 (590)
80 4feg_A Pyruvate oxidase; carba 59.3 13 0.00044 37.8 6.2 111 83-204 410-541 (603)
81 1ovm_A Indole-3-pyruvate decar 59.2 11 0.00036 37.8 5.4 111 83-204 398-527 (552)
82 1t1v_A SH3BGRL3, SH3 domain-bi 59.1 12 0.0004 27.7 4.5 69 240-312 3-80 (93)
83 1itz_A Transketolase; calvin c 58.8 29 0.00099 35.8 8.8 85 109-205 160-257 (675)
84 3l78_A Regulatory protein SPX; 58.4 17 0.00058 28.6 5.5 42 248-290 8-49 (120)
85 3fz4_A Putative arsenate reduc 58.1 16 0.00055 28.8 5.3 43 248-291 11-53 (120)
86 3gx1_A LIN1832 protein; APC633 57.1 72 0.0025 25.4 10.7 112 240-363 6-125 (130)
87 5nul_A Flavodoxin; electron tr 56.4 16 0.00054 28.9 5.1 46 246-298 9-54 (138)
88 2q28_A Oxalyl-COA decarboxylas 56.2 15 0.00051 36.9 6.0 111 83-204 411-539 (564)
89 1sqs_A Conserved hypothetical 56.2 27 0.00093 30.6 7.1 67 247-314 15-103 (242)
90 3gx8_A Monothiol glutaredoxin- 56.1 17 0.0006 28.5 5.2 64 238-307 15-90 (121)
91 2a5l_A Trp repressor binding p 56.0 23 0.00078 29.7 6.4 67 246-314 16-95 (200)
92 3qhp_A Type 1 capsular polysac 55.7 74 0.0025 25.1 9.5 104 239-363 33-140 (166)
93 2kok_A Arsenate reductase; bru 55.5 16 0.00053 28.7 4.8 49 241-291 7-55 (120)
94 3fni_A Putative diflavin flavo 55.5 83 0.0028 25.6 11.7 49 246-296 15-63 (159)
95 1rw1_A Conserved hypothetical 54.6 13 0.00043 29.0 4.1 49 241-291 2-50 (114)
96 3mos_A Transketolase, TK; thia 54.5 28 0.00097 35.5 7.8 97 96-204 126-237 (616)
97 2wvg_A PDC, pyruvate decarboxy 52.7 16 0.00055 36.7 5.6 28 177-204 508-536 (568)
98 3gkx_A Putative ARSC family re 52.2 15 0.0005 29.1 4.2 49 241-291 6-54 (120)
99 3f2v_A General stress protein 52.0 28 0.00096 29.8 6.3 59 255-314 21-82 (192)
100 1w85_A Pyruvate dehydrogenase 51.7 19 0.00064 34.4 5.5 61 142-204 191-262 (368)
101 2vbi_A Pyruvate decarboxylase; 51.5 13 0.00043 37.4 4.5 28 177-204 500-528 (566)
102 2amj_A Modulator of drug activ 51.3 39 0.0013 28.9 7.2 59 252-313 35-93 (204)
103 1s3c_A Arsenate reductase; ARS 51.0 11 0.00036 30.9 3.2 48 241-290 4-51 (141)
104 2iht_A Carboxyethylarginine sy 50.1 58 0.002 32.6 9.2 111 83-204 426-556 (573)
105 2fzv_A Putative arsenical resi 49.1 28 0.00096 31.8 6.1 74 239-313 59-146 (279)
106 1z3e_A Regulatory protein SPX; 49.0 36 0.0012 27.0 6.1 48 241-290 3-50 (132)
107 3rdw_A Putative arsenate reduc 48.9 17 0.00058 28.7 4.0 49 241-291 7-55 (121)
108 3ic4_A Glutaredoxin (GRX-1); s 48.1 22 0.00074 25.7 4.4 65 240-306 13-82 (92)
109 1t0i_A YLR011WP; FMN binding p 47.7 42 0.0014 27.9 6.7 66 247-313 14-107 (191)
110 2r8o_A Transketolase 1, TK 1; 47.7 42 0.0014 34.6 7.8 85 109-205 147-243 (669)
111 2ct6_A SH3 domain-binding glut 47.5 26 0.0009 26.8 4.9 62 240-307 9-88 (111)
112 1gpu_A Transketolase; transfer 47.2 37 0.0013 35.1 7.3 85 109-205 149-246 (680)
113 3nzn_A Glutaredoxin; structura 47.1 21 0.00071 26.8 4.2 68 239-307 22-94 (103)
114 2pgn_A Cyclohexane-1,2-dione h 47.0 7.6 0.00026 39.3 2.1 111 83-204 414-542 (589)
115 3kkj_A Amine oxidase, flavin-c 47.0 15 0.00053 30.8 3.8 31 239-272 3-33 (336)
116 4etn_A LMPTP, low molecular we 46.7 16 0.00053 31.4 3.7 53 240-300 65-121 (184)
117 3q2o_A Phosphoribosylaminoimid 46.5 73 0.0025 29.9 8.9 72 237-316 13-97 (389)
118 3f6r_A Flavodoxin; FMN binding 46.5 33 0.0011 27.2 5.6 63 246-315 12-77 (148)
119 3rhb_A ATGRXC5, glutaredoxin-C 46.2 26 0.00088 26.6 4.7 66 239-307 19-89 (113)
120 3rim_A Transketolase, TK; TPP, 45.9 33 0.0011 35.6 6.7 62 142-205 195-265 (700)
121 2fz5_A Flavodoxin; alpha/beta 45.9 30 0.001 26.8 5.2 60 247-314 11-72 (137)
122 3l4e_A Uncharacterized peptida 45.6 27 0.00093 30.3 5.2 55 238-295 27-85 (206)
123 3hly_A Flavodoxin-like domain; 44.7 1.2E+02 0.0042 24.4 11.8 49 247-298 12-60 (161)
124 2yan_A Glutaredoxin-3; oxidore 44.3 28 0.00096 26.1 4.6 67 239-307 17-88 (105)
125 2cwd_A Low molecular weight ph 43.7 16 0.00053 30.5 3.2 53 240-300 37-94 (161)
126 1id1_A Putative potassium chan 43.0 78 0.0027 25.1 7.4 56 238-296 3-78 (153)
127 3u7r_A NADPH-dependent FMN red 42.6 36 0.0012 29.1 5.4 64 249-313 17-90 (190)
128 3lyu_A Putative hydrogenase; t 42.6 30 0.001 27.8 4.7 48 238-285 18-66 (142)
129 3f0i_A Arsenate reductase; str 42.5 15 0.0005 29.0 2.7 43 248-291 12-54 (119)
130 1ydg_A Trp repressor binding p 41.1 31 0.001 29.3 4.8 68 246-314 17-102 (211)
131 3h8q_A Thioredoxin reductase 3 41.0 85 0.0029 23.8 7.0 66 238-307 16-86 (114)
132 2ab1_A Hypothetical protein; H 40.9 9.6 0.00033 30.5 1.3 39 235-273 58-98 (122)
133 2pan_A Glyoxylate carboligase; 40.9 61 0.0021 32.7 7.7 111 83-204 432-575 (616)
134 2bfd_A 2-oxoisovalerate dehydr 40.8 32 0.0011 33.1 5.3 61 142-204 211-282 (400)
135 2vbf_A Branched-chain alpha-ke 40.8 56 0.0019 32.6 7.4 111 83-204 415-546 (570)
136 3qmx_A Glutaredoxin A, glutare 39.9 32 0.0011 25.8 4.2 71 239-313 16-88 (99)
137 2zki_A 199AA long hypothetical 39.8 79 0.0027 26.2 7.3 67 246-314 14-94 (199)
138 1f4p_A Flavodoxin; electron tr 39.3 42 0.0014 26.5 5.2 61 247-314 12-75 (147)
139 3llv_A Exopolyphosphatase-rela 39.3 86 0.003 24.3 7.0 32 238-272 6-37 (141)
140 2x5n_A SPRPN10, 26S proteasome 38.4 63 0.0022 27.4 6.4 49 250-300 121-174 (192)
141 1qs0_A 2-oxoisovalerate dehydr 37.9 52 0.0018 31.7 6.3 32 172-204 267-302 (407)
142 3b6i_A Flavoprotein WRBA; flav 36.8 76 0.0026 26.2 6.6 65 246-313 12-91 (198)
143 1cfz_A Hydrogenase 2 maturatio 36.7 50 0.0017 27.4 5.3 56 240-299 2-64 (162)
144 1d1q_A Tyrosine phosphatase (E 36.7 26 0.00089 29.0 3.5 38 255-300 61-98 (161)
145 2fi9_A Outer membrane protein; 36.7 11 0.00038 30.3 1.1 36 238-273 68-104 (128)
146 2e85_A Hydrogenase 3 maturatio 36.7 81 0.0028 26.0 6.6 57 240-298 5-66 (159)
147 3fvw_A Putative NAD(P)H-depend 36.5 79 0.0027 26.6 6.7 60 252-313 21-90 (192)
148 1u6t_A SH3 domain-binding glut 36.4 61 0.0021 25.7 5.5 51 253-308 19-81 (121)
149 2fvt_A Conserved hypothetical 36.2 11 0.00038 30.7 1.0 36 238-273 67-103 (135)
150 1edz_A 5,10-methylenetetrahydr 36.0 49 0.0017 30.9 5.6 57 237-295 176-251 (320)
151 1v95_A Nuclear receptor coacti 36.0 93 0.0032 25.0 6.5 60 239-299 9-70 (130)
152 2c42_A Pyruvate-ferredoxin oxi 35.6 1.3E+02 0.0046 33.3 9.8 37 168-204 1026-1065(1231)
153 2ark_A Flavodoxin; FMN, struct 35.4 59 0.002 27.1 5.7 60 247-314 16-76 (188)
154 2gm2_A Conserved hypothetical 35.3 11 0.00038 30.5 0.9 38 236-273 62-100 (132)
155 3g8r_A Probable spore coat pol 35.3 1.3E+02 0.0044 28.4 8.4 60 242-301 138-204 (350)
156 1rtt_A Conserved hypothetical 34.9 26 0.00089 29.4 3.3 60 253-314 26-96 (193)
157 2m1z_A LMO0427 protein; homolo 34.3 1.6E+02 0.0054 22.7 9.4 93 241-363 6-105 (106)
158 3hh1_A Tetrapyrrole methylase 34.3 22 0.00074 27.7 2.5 35 236-270 77-114 (117)
159 2wqp_A Polysialic acid capsule 33.3 1.7E+02 0.0058 27.6 8.9 70 242-313 151-227 (349)
160 2nxw_A Phenyl-3-pyruvate decar 33.1 74 0.0025 31.7 6.8 144 41-203 377-536 (565)
161 3gdw_A Sigma-54 interaction do 33.0 1.9E+02 0.0065 23.2 10.9 107 240-358 6-122 (139)
162 3fwz_A Inner membrane protein 32.8 49 0.0017 26.1 4.5 32 239-273 8-39 (140)
163 3l9w_A Glutathione-regulated p 32.5 93 0.0032 29.8 7.2 56 238-296 4-75 (413)
164 1t5b_A Acyl carrier protein ph 31.7 1.4E+02 0.0047 24.6 7.4 66 248-314 17-110 (201)
165 3hr4_A Nitric oxide synthase, 31.5 38 0.0013 29.7 3.8 57 240-303 41-100 (219)
166 3okp_A GDP-mannose-dependent a 31.0 1.6E+02 0.0055 26.5 8.5 41 273-314 256-301 (394)
167 4bby_A Alkyldihydroxyacetoneph 30.4 37 0.0012 34.9 4.1 35 169-204 201-235 (658)
168 1ycg_A Nitric oxide reductase; 30.3 80 0.0028 29.4 6.3 68 242-313 254-325 (398)
169 3orq_A N5-carboxyaminoimidazol 30.2 1.3E+02 0.0045 28.0 7.7 58 237-298 11-81 (377)
170 2ohh_A Type A flavoprotein FPR 30.0 1E+02 0.0034 28.8 6.9 63 247-313 268-330 (404)
171 2q9u_A A-type flavoprotein; fl 29.7 1.4E+02 0.0047 28.0 7.8 64 247-314 268-331 (414)
172 1ijb_A VON willebrand factor; 29.5 75 0.0026 26.6 5.4 46 252-299 134-181 (202)
173 1e5d_A Rubredoxin\:oxygen oxid 29.5 1.6E+02 0.0054 27.3 8.2 69 242-314 255-327 (402)
174 3jx9_A Putative phosphoheptose 29.5 99 0.0034 25.9 6.0 85 183-271 23-111 (170)
175 3lrx_A Putative hydrogenase; a 29.4 58 0.002 26.5 4.5 50 237-286 22-72 (158)
176 3k5i_A Phosphoribosyl-aminoimi 29.3 1.7E+02 0.006 27.5 8.5 57 237-298 23-94 (403)
177 4hs4_A Chromate reductase; tri 28.4 74 0.0025 27.1 5.1 56 256-313 29-96 (199)
178 4gi5_A Quinone reductase; prot 27.9 64 0.0022 29.4 4.8 62 251-313 40-135 (280)
179 3ngx_A Bifunctional protein fo 27.8 43 0.0015 30.6 3.6 51 237-295 149-199 (276)
180 2hpv_A FMN-dependent NADH-azor 27.8 1.3E+02 0.0043 25.2 6.6 65 249-314 19-118 (208)
181 3cpk_A Uncharacterized protein 27.5 21 0.00072 29.6 1.3 36 238-273 88-124 (150)
182 4e4t_A Phosphoribosylaminoimid 27.4 96 0.0033 29.6 6.3 59 236-298 33-104 (419)
183 3tem_A Ribosyldihydronicotinam 27.4 94 0.0032 27.1 5.7 64 250-314 18-116 (228)
184 1vli_A Spore coat polysacchari 27.4 1.8E+02 0.0062 27.7 8.1 71 241-313 160-239 (385)
185 2vk8_A Pyruvate decarboxylase 27.3 27 0.00092 34.9 2.3 27 178-204 509-537 (563)
186 2bmv_A Flavodoxin; electron tr 27.2 87 0.003 25.3 5.2 64 242-313 4-68 (164)
187 2ozl_A PDHE1-A type I, pyruvat 27.1 57 0.002 30.9 4.5 31 173-204 224-258 (365)
188 2wul_A Glutaredoxin related pr 26.7 60 0.0021 25.5 3.9 36 238-273 19-59 (118)
189 2fek_A Low molecular weight pr 26.6 40 0.0014 28.2 2.9 39 255-300 68-106 (167)
190 3jvi_A Protein tyrosine phosph 26.0 61 0.0021 26.7 4.0 53 240-300 37-94 (161)
191 4a5l_A Thioredoxin reductase; 25.7 1.1E+02 0.0039 26.9 6.2 47 237-286 151-197 (314)
192 2vsy_A XCC0866; transferase, g 25.7 4.1E+02 0.014 25.5 10.8 109 238-363 406-522 (568)
193 3tnl_A Shikimate dehydrogenase 25.7 1E+02 0.0034 28.6 5.8 34 237-273 153-187 (315)
194 1fov_A Glutaredoxin 3, GRX3; a 25.5 1.4E+02 0.0049 20.2 5.6 71 240-314 2-73 (82)
195 4a26_A Putative C-1-tetrahydro 25.4 82 0.0028 29.1 5.1 51 237-295 164-216 (300)
196 1pdo_A Mannose permease; phosp 24.9 2.5E+02 0.0086 22.0 10.6 115 240-363 3-123 (135)
197 1ykg_A SIR-FP, sulfite reducta 24.9 77 0.0026 25.9 4.4 63 244-313 14-80 (167)
198 3mcu_A Dipicolinate synthase, 24.7 41 0.0014 29.3 2.8 39 238-276 5-45 (207)
199 3l4n_A Monothiol glutaredoxin- 24.6 2.1E+02 0.0071 22.4 6.8 65 239-307 14-86 (127)
200 3r6w_A FMN-dependent NADH-azor 24.4 2.4E+02 0.0081 23.6 7.7 63 251-314 20-111 (212)
201 3p2o_A Bifunctional protein fo 24.2 58 0.002 29.9 3.8 51 237-295 159-209 (285)
202 3pu6_A Uncharacterized protein 24.1 1.9E+02 0.0065 23.7 6.7 55 240-298 4-64 (157)
203 2ywl_A Thioredoxin reductase r 24.0 80 0.0027 25.5 4.4 31 240-273 3-33 (180)
204 3nhv_A BH2092 protein; alpha-b 23.5 47 0.0016 26.6 2.8 34 237-270 71-104 (144)
205 3od1_A ATP phosphoribosyltrans 23.1 1.4E+02 0.005 28.4 6.6 56 240-301 338-394 (400)
206 1n3y_A Integrin alpha-X; alpha 23.0 1.2E+02 0.0039 25.0 5.3 60 254-313 130-193 (198)
207 1nh9_A MJA10B, DNA-binding pro 23.0 1.6E+02 0.0054 21.8 5.4 43 237-279 25-70 (87)
208 3l07_A Bifunctional protein fo 22.3 69 0.0023 29.4 3.9 51 237-295 160-210 (285)
209 2aef_A Calcium-gated potassium 22.2 74 0.0025 27.3 4.0 55 238-296 9-78 (234)
210 3c85_A Putative glutathione-re 22.1 87 0.003 25.6 4.3 32 238-272 39-71 (183)
211 2g1u_A Hypothetical protein TM 21.9 91 0.0031 24.8 4.2 33 237-272 18-50 (155)
212 3l4b_C TRKA K+ channel protien 21.6 1.9E+02 0.0066 24.2 6.6 30 240-272 2-31 (218)
213 4a5o_A Bifunctional protein fo 21.5 64 0.0022 29.6 3.5 51 237-295 160-210 (286)
214 3ax6_A Phosphoribosylaminoimid 21.2 2.5E+02 0.0084 25.9 7.8 52 240-294 3-67 (380)
215 2wmy_A WZB, putative acid phos 21.2 44 0.0015 27.3 2.1 39 255-300 54-92 (150)
216 1b0a_A Protein (fold bifunctio 21.0 67 0.0023 29.5 3.5 51 237-295 158-208 (288)
217 3le1_A Phosphotransferase syst 20.8 1E+02 0.0036 22.6 4.0 31 235-265 55-85 (88)
218 3dfz_A SIRC, precorrin-2 dehyd 20.5 1.5E+02 0.005 25.9 5.6 34 237-273 30-63 (223)
219 3oz2_A Digeranylgeranylglycero 20.4 69 0.0024 29.2 3.6 32 239-273 5-36 (397)
220 4gcm_A TRXR, thioredoxin reduc 20.3 93 0.0032 27.6 4.4 31 239-272 7-37 (312)
221 3lc0_A Histidyl-tRNA synthetas 20.2 1.8E+02 0.0061 28.3 6.6 56 239-298 362-420 (456)
222 3pp8_A Glyoxylate/hydroxypyruv 20.1 2.2E+02 0.0076 26.1 7.0 55 237-295 138-199 (315)
No 1
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=3.2e-69 Score=524.77 Aligned_cols=327 Identities=60% Similarity=1.009 Sum_probs=297.5
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 114 (367)
.+++++++++++|.+++++||+|+++++|++.++|+++.+++|.++|+|+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 13 ~~~~~~~a~~~~L~~l~~~~~~vv~~~~D~~~~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rp~~~~ 92 (341)
T 2ozl_B 13 LQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEF 92 (341)
T ss_dssp CEEEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccccHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999999999999999999999999987777777678899999999999999999999999999999999999996
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHh
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a 194 (367)
++++|++|++|||++++|+++||+||++++||+++.++|...++|+||||.+|++++++|||+|++|+|++|+++++++|
T Consensus 93 ~f~~F~~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~G~~g~~G~tHs~~~ea~l~~iP~l~V~~Psd~~e~~~~l~~a 172 (341)
T 2ozl_B 93 MTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSA 172 (341)
T ss_dssp SSGGGGGGGHHHHHTTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccccCCCCEEEEEcCcCCCCCCcchhhHHHHHhccCCCCEEEEeCCHHHHHHHHHHH
Confidence 56899999999999999999999999999999999887754459999988878999999999999999999999999999
Q ss_pred HcCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeee
Q 017695 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274 (367)
Q Consensus 195 ~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~ 274 (367)
++.++|++||++|.+|+.+.++.+.++++++.+++||++++++|.|++||++|+++..|++|+++|+++|++++|||+++
T Consensus 173 ~~~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~ 252 (341)
T 2ozl_B 173 IRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRT 252 (341)
T ss_dssp HHSSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCE
T ss_pred HhcCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEeccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeee
Confidence 99999999999987765322221222445677889999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHH-hccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHH
Q 017695 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE-ESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFL 353 (367)
Q Consensus 275 i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~-~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~ 353 (367)
++|||++.|.+++++++++|++||+...||||++|++.+.+ +++..++.|+.++|++|.|++++..+++++++|+++|+
T Consensus 253 l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~~~g~~l~~~~g~~~~~I~ 332 (341)
T 2ozl_B 253 IRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYAKILEDNSIPQVKDII 332 (341)
T ss_dssp EETCCHHHHHHHHHHHSCEEEECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCCCSSHHHHHTTSCCHHHHH
T ss_pred ecCCCHHHHHHHHhcCCeEEEEecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCCCCcHHHHHHhCcCHHHHH
Confidence 99999999999999999999999999899999999999988 76544578999999999999998888899999999999
Q ss_pred HHHHHHHhh
Q 017695 354 YDSSIDGCY 362 (367)
Q Consensus 354 ~~~i~~~l~ 362 (367)
++ |+++++
T Consensus 333 ~~-i~~~l~ 340 (341)
T 2ozl_B 333 FA-IKKTLN 340 (341)
T ss_dssp HH-HHHHHT
T ss_pred HH-HHHHhc
Confidence 99 999875
No 2
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=1.6e-68 Score=517.08 Aligned_cols=322 Identities=40% Similarity=0.649 Sum_probs=294.1
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEecc
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFM 115 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~ 115 (367)
++++|++|+++|.+++++||+|+++++|++.++|+++.+++|.++|||+||+|+||+|++|+++|+|+|++|+|||++++
T Consensus 2 ~~~~~~a~~~~L~~l~~~~~~vv~~~~d~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~t 81 (324)
T 1w85_B 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQ 81 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEBCS
T ss_pred cchHHHHHHHHHHHHHhHCcCEEEEcCcccccCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCEEEEEec
Confidence 46899999999999999999999999999988898887889999999999999999999999999999999999999854
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhH
Q 017695 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAI 195 (367)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~ 195 (367)
++.|++|++|||++++|+++||++|++++|+|++.+.|...++|+||++.++++++++|||+|++|+|++|++.++++|+
T Consensus 82 ~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~l~V~~Psd~~e~~~~l~~a~ 161 (324)
T 1w85_B 82 FFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAI 161 (324)
T ss_dssp SGGGGGGTHHHHHTTGGGHHHHTTTSSCCCCEEEEEECSSSCCCTTSSCCCHHHHTTSTTCEEECCSSHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhhhccCCCcCCEEEEEeccCCCCCCCcccccHHHHHccCCCCEEEeeCCHHHHHHHHHHHH
Confidence 58889999999999999999999999999999987655444578899888889999999999999999999999999999
Q ss_pred cCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeec
Q 017695 196 RDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275 (367)
Q Consensus 196 ~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i 275 (367)
++++|++||+++.+++... +.++++++.+++||++++++|+|++||++|++++.|++|+++|+++|++++|||++|+
T Consensus 162 ~~~~Pv~i~~p~~l~r~~~---~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l 238 (324)
T 1w85_B 162 RDNDPVIFLEHLKLYRSFR---QEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTV 238 (324)
T ss_dssp HSSSCEEEEEETTTSSSCC---EECCSSCCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEE
T ss_pred HcCCCEEEEechHhcCCCC---CCCCCccccccCCceEEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeee
Confidence 9999999999987765321 2344556678899999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHHH
Q 017695 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLYD 355 (367)
Q Consensus 276 ~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~~ 355 (367)
+|||++.|.+++++++++||+|||...||||++|++.+.++++..++.|+.++|++|.|++++. |+++++||+++|+++
T Consensus 239 ~P~d~~~i~~~~~~~~~vvvvEe~~~~Gg~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~~-l~~~~gl~~~~I~~~ 317 (324)
T 1w85_B 239 QPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAILSLEAPVLRVAAPDTVYPFAQ-AESVWLPNFKDVIET 317 (324)
T ss_dssp ESCCHHHHHHHHHHHSCEEEEEEEETTSSSHHHHHHHHHHHHGGGCSSCCEEEEECSSSSCCGG-GHHHHSCCHHHHHHH
T ss_pred cCCCHHHHHHHHhhCCcEEEEeCCCcCChHHHHHHHHHHhhCccccCCCeEEEecCCcCCCcHH-HHHHhCcCHHHHHHH
Confidence 9999999999999999999999999899999999999988875456688999999999999988 888889999999999
Q ss_pred HHHHHhh
Q 017695 356 SSIDGCY 362 (367)
Q Consensus 356 ~i~~~l~ 362 (367)
|+++++
T Consensus 318 -i~~~l~ 323 (324)
T 1w85_B 318 -AKKVMN 323 (324)
T ss_dssp -HHHHHT
T ss_pred -HHHHhh
Confidence 998874
No 3
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=6.7e-68 Score=512.72 Aligned_cols=322 Identities=41% Similarity=0.673 Sum_probs=293.5
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 114 (367)
++++||++++++|.+++++||+|+++++|++.++|+++.+.+|.++|||+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 2 ~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~~p~~~~ 81 (324)
T 1umd_B 2 ALMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEI 81 (324)
T ss_dssp CEECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcCCCEEEECCcccccCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEe
Confidence 35789999999999999999999999999998888887778999999999999999999999999999999999999985
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHh
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a 194 (367)
+++.|++|++|||++++|+++||+||++++|+|++.+.|...++|+||++.++++++++|||+|++|+|++|++.++++|
T Consensus 82 t~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a 161 (324)
T 1umd_B 82 QFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAA 161 (324)
T ss_dssp SSGGGCGGGHHHHHHTTTTHHHHTTTSSCCCCEEEEEECSSSSCGGGSSCCCHHHHHTSTTCEEEECCSHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhcCCCCcCCEEEEEcCCCCCCCCCccchhHHHHHhcCCCCEEEEeCCHHHHHHHHHHH
Confidence 45888899999999999999999999999999998764544446888988888999999999999999999999999999
Q ss_pred HcCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeee
Q 017695 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274 (367)
Q Consensus 195 ~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~ 274 (367)
+++++|+++|+++.+++... +.++++++.+++||++++++|.|++||++|++++.|++|+++|+++|++++|||++|
T Consensus 162 ~~~~~Pv~i~~p~~l~~~~~---~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~ 238 (324)
T 1umd_B 162 IRDEDPVVFLEPKRLYRSVK---EEVPEEDYTLPIGKAALRREGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRT 238 (324)
T ss_dssp HHCSSCEEEEEEGGGSSSCC---EECCSSCCCCCTTCCEEEECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCE
T ss_pred HhcCCCEEEEechHhcCCCC---CCcCCCCccccCCcceEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEece
Confidence 99999999999988765421 234455667889999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHH
Q 017695 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLY 354 (367)
Q Consensus 275 i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~ 354 (367)
++|||++.|++++++++++|++|||...||||++|++.+.++++..++.|+.++|++|.|++++ |++++++|+++|++
T Consensus 239 l~P~d~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~--l~~~~g~~~~~I~~ 316 (324)
T 1umd_B 239 LMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLLDMLLAPPIRVTGFDTPYPYA--QDKLYLPTVTRILN 316 (324)
T ss_dssp EETCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHGGGCSSCCEEEEECSSCCCST--THHHHSCCHHHHHH
T ss_pred ecCCCHHHHHHHHhcCCeEEEEecCCcCCCHHHHHHHHHHHhCccccCCCeEEEeCCCCCCCHH--HHHHhCcCHHHHHH
Confidence 9999999999999999999999999989999999999998876545668899999999999998 78888999999999
Q ss_pred HHHHHHhh
Q 017695 355 DSSIDGCY 362 (367)
Q Consensus 355 ~~i~~~l~ 362 (367)
+ ++++++
T Consensus 317 ~-i~~~l~ 323 (324)
T 1umd_B 317 A-AKRALD 323 (324)
T ss_dssp H-HHHHHH
T ss_pred H-HHHHhh
Confidence 9 998874
No 4
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=5e-67 Score=514.00 Aligned_cols=320 Identities=40% Similarity=0.627 Sum_probs=255.2
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 114 (367)
.++++|++++++|.+++++||+|+++++|++.++|+++.+.+|.++|+|+||||+||+|++|+++|+|+|++|+|||+++
T Consensus 49 ~~~~~~~a~~~aL~~l~~~d~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rpv~~~ 128 (369)
T 1ik6_A 49 MMANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLYERFGPERVIDTPLNEGGILGFAMGMAMAGLKPVAEI 128 (369)
T ss_dssp EEECHHHHHHHHHHHHHHHCTTEEEEEC---------CTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcccHHHHHHHHHHHHHccCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECcccHHHHHHHHHHHHHCCCeeEEEe
Confidence 55789999999999999999999999999988888877778999999999999999999999999999999999999995
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHh
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a 194 (367)
+++.|++|++|||++++|+++||++|+.++||+++.++|...++|+||++.++++|+++|||+|++|+|++|++.++++|
T Consensus 129 tf~~Fl~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A 208 (369)
T 1ik6_A 129 QFVDFIWLGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKAA 208 (369)
T ss_dssp CCC----CCHHHHHHHHHHHHC------CCCCEEEEEECC-----------HHHHHHTCTTCEEECCCSHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccccccHHHHHcCCCCcEEEecCCHHHHHHHHHHH
Confidence 45789999999999999999999999999999999875444467889988889999999999999999999999999999
Q ss_pred HcCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeee
Q 017695 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274 (367)
Q Consensus 195 ~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~ 274 (367)
++.++|++||+++.+++... +.++++++.+++|+++++++|.|++||++|++++.|++|+++|+ | +++|||++|
T Consensus 209 ~~~~~Pv~i~~p~~l~r~~~---~~v~~~~~~~~~G~~~v~~~g~dv~Iia~G~~v~~a~~Aa~~L~--G-~v~Vi~~~~ 282 (369)
T 1ik6_A 209 IRGDDPVVFLEPKILYRAPR---EEVPEGDYVVEIGKARVAREGDDVTLVTYGAVVHKALEAAERVK--A-SVEVVDLQT 282 (369)
T ss_dssp HHSSSCEEEEEEGGGSSCCC---EEEECSSCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHTSS--S-CEEEEECCE
T ss_pred HhCCCCEEEEEehhhhccCC---CCcCCCcccccCCceEEEEcCCCEEEEEeCHHHHHHHHHHHHhC--C-CeEEEeeee
Confidence 99999999999988775421 23344566788999999999999999999999999999999997 8 999999999
Q ss_pred cCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHH
Q 017695 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLY 354 (367)
Q Consensus 275 i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~ 354 (367)
++|||++.|++++++++++||+||+...||||++|++.+.++++..++.|+.++|++|.|++++. |++.++||+++|++
T Consensus 283 l~P~d~~~i~~~~~~~~~vvvvEe~~~~GG~g~~v~~~l~~~~~~~l~~pv~~vg~~d~~~~~~~-l~~~~gl~~~~I~~ 361 (369)
T 1ik6_A 283 LNPLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKALDRLTAPVIRLAGPDVPQSPIA-ADAAYAPTVERIIK 361 (369)
T ss_dssp EETTCHHHHHHHHHHHCCEEEEEEEESTTSHHHHHHHHHHHHSGGGCSSCCEEEEECCCC-------------CHHHHHH
T ss_pred cCCCCHHHHHHHHhccCeEEEEecCCcCCcHHHHHHHHHHhhCccccCCCeEEEcCCCcCCCCHH-HHHHhCcCHHHHHH
Confidence 99999999999999999999999999899999999999988765446689999999999999988 88888999999999
Q ss_pred HHHHHHhh
Q 017695 355 DSSIDGCY 362 (367)
Q Consensus 355 ~~i~~~l~ 362 (367)
+ |+++++
T Consensus 362 ~-i~~~l~ 368 (369)
T 1ik6_A 362 A-IEYVMR 368 (369)
T ss_dssp H-HHHHHT
T ss_pred H-HHHHhh
Confidence 9 999874
No 5
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=5.9e-66 Score=502.30 Aligned_cols=328 Identities=34% Similarity=0.583 Sum_probs=291.7
Q ss_pred cccccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhc
Q 017695 26 NLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAY 105 (367)
Q Consensus 26 ~~~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~ 105 (367)
.+..|.. +++++||++++++|.+++++||+|+++++|++ .+|+++.+.+|.++|||+||+|+||+|++|+++|+|+|+
T Consensus 11 ~~~~~~~-~~~~~~~~a~~~aL~~l~~~~~~vv~~~~D~~-~~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~ 88 (342)
T 2bfd_B 11 EPREYGQ-TQKMNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAV 88 (342)
T ss_dssp ---CCSC-EEEECHHHHHHHHHHHHHHHCTTCEEEETTTT-TTCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHH
T ss_pred CCCCCCc-cCCccHHHHHHHHHHHHHhcCCCEEEEcCccC-CCcccchHHHHHHHhCCCeEEEcCcCHHHHHHHHHHHHH
Confidence 3445543 46789999999999999999999999999998 677887778999999999999999999999999999999
Q ss_pred cCCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccc-cEEEEeCCCCCCCCCCCc-hhHHHHHHhcCCCcEEEeeCC
Q 017695 106 YGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQH-SHCYAAWYASVPGLKVLSPYS 183 (367)
Q Consensus 106 ~G~~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~-pvv~~~~~G~~~g~G~tH-~~~~~a~~~~iP~~~V~~P~d 183 (367)
+|+|||++++++.|++|++|||++++|+++||++|+.++ ||+++.++|.. ++|++| ++.|+++++++|||+|++|+|
T Consensus 89 ~G~rp~~~~tf~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~-~~G~th~~~~d~~~l~~iP~l~V~~Psd 167 (342)
T 2bfd_B 89 TGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCV-GHGALYHSQSPEAFFAHCPGIKVVIPRS 167 (342)
T ss_dssp TTCCEEEECSSGGGCGGGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCC-SSCGGGSSCCCHHHHHTSTTCEEECCSS
T ss_pred CCCeeEEEecchhHHHHHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCC-CCCcchhhHhHHHHHhcCCCcEEEeeCC
Confidence 999999985458889999999999999999999999999 99999775432 467776 478889999999999999999
Q ss_pred HHHHHHHHHHhHcCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhc
Q 017695 184 SEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKE 263 (367)
Q Consensus 184 ~~e~~~~~~~a~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~ 263 (367)
++|++.++++|+++++|++||+++.+++... +.++.+++.+++|+++++++|.|++||++|++++.|++|+++|+++
T Consensus 168 ~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~---~~~~~~~~~~~~G~~~v~~~g~dv~iia~G~~~~~a~~Aa~~L~~~ 244 (342)
T 2bfd_B 168 PFQAKGLLLSCIEDKNPCIFFEPKILYRAAA---EEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKEK 244 (342)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEEGGGTTSCC---EEEESSCCCCCSSCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEecchhcCCCC---CCCCCcccceeCCceEEeccCCCEEEEEECHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999977765432 2334456778899999999999999999999999999999999999
Q ss_pred -CCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHH
Q 017695 264 -GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLE 342 (367)
Q Consensus 264 -Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~ 342 (367)
|++++|||++|++|||++.|++++++++++|++||+...||||++|++.+.++++..++.|+.++|++|.|+|++ |+
T Consensus 245 ~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~~~~l~~~v~~vg~~d~~~~~~--l~ 322 (342)
T 2bfd_B 245 LGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECFLNLEAPISRVCGYDTPFPHI--FE 322 (342)
T ss_dssp HCCCEEEEECCEEESCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHGGGCSSCCEEEEECSSCCCST--TH
T ss_pred cCCCEEEEeeeecCCCCHHHHHHHHhcCCEEEEEEeCccCCcHHHHHHHHHHhhCccccCCCeEEEecCCCCChHH--HH
Confidence 999999999999999999999999999999999999889999999999998876544567899999999999887 78
Q ss_pred HHhCCCHHHHHHHHHHHHhh
Q 017695 343 RMAVPQVLCFLYDSSIDGCY 362 (367)
Q Consensus 343 ~~~~l~~~~I~~~~i~~~l~ 362 (367)
+++++|+++|+++ |+++++
T Consensus 323 ~~~gl~~~~I~~~-i~~~l~ 341 (342)
T 2bfd_B 323 PFYIPDKWKCYDA-LRKMIN 341 (342)
T ss_dssp HHHSCCHHHHHHH-HHHHHT
T ss_pred HHHCcCHHHHHHH-HHHHhc
Confidence 8889999999999 998874
No 6
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=1.4e-64 Score=492.16 Aligned_cols=321 Identities=38% Similarity=0.587 Sum_probs=286.7
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 114 (367)
.++++|++++++|.+++++||+|+++++|++.++|+++.+++|.++|||+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 3 ~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~G~A~~G~rp~~~~ 82 (338)
T 1qs0_B 3 TTMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEI 82 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CcchHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHHHHHhCCCEEEEEe
Confidence 45789999999999999999999999999998888887778999999999999999999999999999999999999985
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCc-hhHHHHHHhcCCCcEEEeeCCHHHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQH-SHCYAAWYASVPGLKVLSPYSSEDARGLLKA 193 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH-~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~ 193 (367)
+++.|++|++|||++++|+++||+||+.++||+++.++|. .++|++| ++.|+++++++|||+|++|+|++|+++++++
T Consensus 83 t~~~F~~~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th~s~~d~~~l~~iP~l~V~~Psd~~e~~~~l~~ 161 (338)
T 1qs0_B 83 QFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIA 161 (338)
T ss_dssp SCGGGCGGGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSSSSCCCHHHHTTSTTCEEECCCSHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCcccccccHHHHHhcCCCCEEEeeCCHHHHHHHHHH
Confidence 4588899999999999999999999999999999987543 3467665 5788999999999999999999999999999
Q ss_pred hHcCCCcEEEeccccccCCCCC---ccc----------cccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHH
Q 017695 194 AIRDPDPVVFLENELLYGESFP---VSA----------EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEIL 260 (367)
Q Consensus 194 a~~~~~Pv~ir~~~~~~~~~~~---~~~----------~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L 260 (367)
|+++++|++||+++.+++...+ ..+ .++++++.+++||++++++|.|++|||+|++++.|++|+++
T Consensus 162 A~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~- 240 (338)
T 1qs0_B 162 SIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEE- 240 (338)
T ss_dssp HHHSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSSCEEEECTTHHHHHHHHHHH-
T ss_pred HHhcCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecCCCCEEEEEeCHHHHHHHHHHHH-
Confidence 9999999999998766654322 000 33445566789999999999999999999999999999998
Q ss_pred HhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHH
Q 017695 261 AKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAAN 340 (367)
Q Consensus 261 ~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~ 340 (367)
+|++++|||++|++|||++.|.++++++++++|+||+...||||++|++.+.++++..++.|+.++|++|.|.|++
T Consensus 241 --~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~gG~g~~V~~~l~~~~~~~l~~~v~~ig~~d~~~~~~-- 316 (338)
T 1qs0_B 241 --SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCFHHLEAPIERVTGWDTPYPHA-- 316 (338)
T ss_dssp --HCCCCEEEECSEEESCCHHHHHHHHHHHSCEEEEESSCSTTSTHHHHHHHHHHHSSSSCCSCCEEEECCSSCCCST--
T ss_pred --cCCCEEEEeecccCCCCHHHHHHHHhcCCEEEEEecCCcCCcHHHHHHHHHHHhcccccCCCeEEEecCCcCCcHH--
Confidence 6999999999999999999999999999999999999989999999999998876544567899999999999987
Q ss_pred HHHHhCCCHHHHHHHHHHHHhh
Q 017695 341 LERMAVPQVLCFLYDSSIDGCY 362 (367)
Q Consensus 341 l~~~~~l~~~~I~~~~i~~~l~ 362 (367)
|++.+++|+++|+++ |++++.
T Consensus 317 l~~~~g~~~~~I~~~-i~~~l~ 337 (338)
T 1qs0_B 317 QEWAYFPGPSRVGAA-LKKVME 337 (338)
T ss_dssp THHHHSCCHHHHHHH-HHHSSC
T ss_pred HHHHHCCCHHHHHHH-HHHHhc
Confidence 778889999999999 998764
No 7
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3.6e-56 Score=465.04 Aligned_cols=300 Identities=23% Similarity=0.270 Sum_probs=268.4
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEecc
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFM 115 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~~ 115 (367)
..+|+++|+++|.+++++||+|+++++|+.... ++ .+|.++| |+||||+||+|++|+++|+|+|++|+|||+++|
T Consensus 321 ~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~---~~-~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~~ 395 (629)
T 2o1x_A 321 AYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGS---GL-VEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIY 395 (629)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TC-HHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhhCcCEEEEeccccCCc---Ch-HHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEEEec
Confidence 578999999999999999999999999986433 33 6899999 999999999999999999999999999999995
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCC-CCCCCCCCCchhH-HHHHHhcCCCcEEEeeCCHHHHHHHHHH
Q 017695 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAAAGVGAQHSHC-YAAWYASVPGLKVLSPYSSEDARGLLKA 193 (367)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~~g~G~tH~~~-~~a~~~~iP~~~V~~P~d~~e~~~~~~~ 193 (367)
+.|++||+|||++++|+ +++||+++.++ |...++|+||++. +.++||++|||+|++|+|++|++.++++
T Consensus 396 -~~F~~~a~dqi~~~~a~--------~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~ 466 (629)
T 2o1x_A 396 -STFLQRAYDQVLHDVAI--------EHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKY 466 (629)
T ss_dssp -HHHHGGGHHHHHHTTTT--------TTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhh--------cCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHH
Confidence 77899999999999996 68999999874 5543489999764 5599999999999999999999999999
Q ss_pred hHcCCCcEEEeccccccCCCCCcccccc-CCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 194 AIRDPDPVVFLENELLYGESFPVSAEVL-DSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 194 a~~~~~Pv~ir~~~~~~~~~~~~~~~~~-~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
|++.++|++||++|..+. .++ ++.+.+++|+++++++|.|++||++|++++.|++|+++|+ +++|||+
T Consensus 467 a~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa~~L~----~~~Vi~~ 535 (629)
T 2o1x_A 467 AQTHDGPFAIRYPRGNTA-------QVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNA 535 (629)
T ss_dssp HHHSSSCEEEECCSSBCC-------CCCTTCCCCCCTTCCEEEECCSSEEEEECHHHHHHHHHHHTTCT----TEEEEEC
T ss_pred HHhCCCCEEEEecCCCCC-------CCcccccccccCCceEEEeeCCCEEEEEecHHHHHHHHHHHHhc----CCEEEee
Confidence 999999999999876431 111 2345678999999999999999999999999999999996 8999999
Q ss_pred eecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH--HHHHHHhCCCHH
Q 017695 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA--ANLERMAVPQVL 350 (367)
Q Consensus 273 ~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~--~~l~~~~~l~~~ 350 (367)
+|++|||++.|.+++++++++||+||+...||||++|++.+.+++ ++.|+.++|++|.|++++ +.|++++++|++
T Consensus 536 ~~~~Pld~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~---~~~~v~~ig~~d~f~~~g~~~~l~~~~gl~~~ 612 (629)
T 2o1x_A 536 RFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMN---LHPTVRVLGIPDEFQEHATAESVHARAGIDAP 612 (629)
T ss_dssp CEEESCCHHHHHHHHHHCSEEEEEEEEESSSSHHHHHHHHHHHTT---CCCEEEEEEECSSCCCSCCHHHHHHHHTCSHH
T ss_pred CCCCCCcHHHHHHHHhhCCcEEEEecCCCCCCHHHHHHHHHHHhC---CCCCeEEEeeCCcCCCCCCHHHHHHHHCcCHH
Confidence 999999999999999999999999999999999999999998875 367999999999999886 458888999999
Q ss_pred HHHHHHHHHHhhhc
Q 017695 351 CFLYDSSIDGCYKF 364 (367)
Q Consensus 351 ~I~~~~i~~~l~~~ 364 (367)
+|+++ |++++.+.
T Consensus 613 ~I~~~-i~~~~~~~ 625 (629)
T 2o1x_A 613 AIRTV-LAELGVDV 625 (629)
T ss_dssp HHHHH-HHHTTCCC
T ss_pred HHHHH-HHHHHhhc
Confidence 99999 99988763
No 8
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-55 Score=461.03 Aligned_cols=299 Identities=21% Similarity=0.291 Sum_probs=265.3
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~~~ 114 (367)
...+|+++|+++|.+++++||+|+++++|+.... ++ .+|.++| |+||||+||+|++|+++|+|+|++|+|||+++
T Consensus 317 ~~~~~~~~~~~~l~~~~~~d~~v~~~~~d~~~~~---~~-~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~ 391 (621)
T 2o1s_A 317 GLPSYSKIFGDWLCETAAKDNKLMAITPAMREGS---GM-VEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAI 391 (621)
T ss_dssp -CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TC-HHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHHHHHHHhhCcCEEEEeCcccCCc---Ch-HHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4579999999999999999999999999986432 33 6899999 99999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCC-CCCCCCCCCchhH-HHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAAAGVGAQHSHC-YAAWYASVPGLKVLSPYSSEDARGLLK 192 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~~g~G~tH~~~-~~a~~~~iP~~~V~~P~d~~e~~~~~~ 192 (367)
| +.|++|++|||++++|+ +++||+++.++ |...++|+||++. +.++++++|||+|++|+|++|++++++
T Consensus 392 ~-~~F~~~a~dqi~~~~a~--------~~~pvv~~~~~~g~~g~~G~tH~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~ 462 (621)
T 2o1s_A 392 Y-STFLQRAYDQVLHDVAI--------QKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLY 462 (621)
T ss_dssp E-TTGGGGGHHHHHHTTTT--------TTCCCEEEEESCBCCCTTCGGGCBCSHHHHTTTSTTCEEECCSSHHHHHHHHH
T ss_pred h-HhHHHHHHHHHHHHHHh--------cCCCEEEEEECCccCCCCCCccCchHHHHHHhcCCCCEEEecCCHHHHHHHHH
Confidence 5 77889999999999986 69999999874 5643399999764 559999999999999999999999999
Q ss_pred HhHcC-CCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEE
Q 017695 193 AAIRD-PDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVIN 271 (367)
Q Consensus 193 ~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~ 271 (367)
+|++. ++|++||++|..+.. ...++. +.+++|+++++++|+|++||++|++++.|++| ++||+++|||
T Consensus 463 ~a~~~~~~Pv~i~~~r~~~~~-----~~~~~~-~~~~~G~~~~~~~g~dv~iva~G~~~~~a~~A-----~~Gi~v~Vi~ 531 (621)
T 2o1s_A 463 TGYHYNDGPSAVRYPRGNAVG-----VELTPL-EKLPIGKGIVKRRGEKLAILNFGTLMPEAAKV-----AESLNATLVD 531 (621)
T ss_dssp HHHHCCSSCEEEECCSSBCCC-----CCCCCC-CCCCTTCCEEEECCSSEEEEEESTTHHHHHHH-----HHHHTCEEEE
T ss_pred HHHHcCCCCEEEEeCCCCCCC-----CCCCcc-ccccCCceEEeecCCCEEEEEecHHHHHHHHH-----cCCCCEEEEe
Confidence 99998 999999998764321 111222 56789999999999999999999999999999 5699999999
Q ss_pred eeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH--HHHHHHhCCCH
Q 017695 272 LRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA--ANLERMAVPQV 349 (367)
Q Consensus 272 ~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~--~~l~~~~~l~~ 349 (367)
++|++|||++.|.+++++++++||+||+...||||++|++.+.+++ ++.|+.++|++|.|++++ +.|++++++|+
T Consensus 532 ~~~~~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~---~~~~v~~ig~~d~f~~~g~~~~l~~~~g~~~ 608 (621)
T 2o1s_A 532 MRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHR---KPVPVLNIGLPDFFIPQGTQEEMRAELGLDA 608 (621)
T ss_dssp CCEEESCCHHHHHHHHHHCSEEEEEEEEESTTSHHHHHHHHHHHTT---CCCCEEEEEECSSCCCCSCHHHHHHHTTCSH
T ss_pred cCccCCCCHHHHHHHHccCCeEEEEECCCCCCCHHHHHHHHHHhcC---CCCCeEEEecCCcCCCCCCHHHHHHHHCcCH
Confidence 9999999999999999999999999999999999999999998875 467999999999999886 46888899999
Q ss_pred HHHHHHHHHHHhh
Q 017695 350 LCFLYDSSIDGCY 362 (367)
Q Consensus 350 ~~I~~~~i~~~l~ 362 (367)
++|+++ |++++.
T Consensus 609 ~~I~~~-i~~~l~ 620 (621)
T 2o1s_A 609 AGMEAK-IKAWLA 620 (621)
T ss_dssp HHHHHH-HHHHHC
T ss_pred HHHHHH-HHHHhc
Confidence 999999 998864
No 9
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=6.7e-56 Score=460.96 Aligned_cols=302 Identities=24% Similarity=0.292 Sum_probs=262.7
Q ss_pred cccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccC
Q 017695 28 RNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYG 107 (367)
Q Consensus 28 ~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G 107 (367)
..|.. +.++++|++++++|.+++++||+|+++++|++.+ ++ +..|.++| |+||||+||+|++|+++|+|||++|
T Consensus 305 ~~~~~-~~~~a~r~a~~~~L~~l~~~d~~vv~~~aD~~~~--~~--~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~G 378 (616)
T 3mos_A 305 PSYKV-GDKIATRKAYGQALAKLGHASDRIIALDGDTKNS--TF--SEIFKKEH-PDRFIECYIAEQNMVSIAVGCATRN 378 (616)
T ss_dssp CCCCT-TCBCCHHHHHHHHHHHHHHHCTTEEEEESSCHHH--HS--HHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGGG
T ss_pred ccccc-ccchHHHHHHHHHHHHHHhhCCCEEEEeCCcCCC--cc--hhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHcC
Confidence 34543 4678999999999999999999999999999743 32 47899999 9999999999999999999999999
Q ss_pred C-eeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeCC
Q 017695 108 L-KPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPYS 183 (367)
Q Consensus 108 ~-~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~d 183 (367)
+ +||+.+| +.|++|++|||+++ ++ +++|++++.. +|.+.| +|+||+ +.++++|+++||++|++|+|
T Consensus 379 ~~~~~~~~f-~~Fl~~a~dqi~~~-a~--------~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~l~~iP~l~V~~P~d 448 (616)
T 3mos_A 379 RTVPFCSTF-AAFFTRAFDQIRMA-AI--------SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPSD 448 (616)
T ss_dssp CCEEEEEEE-GGGGGGGHHHHHHH-HH--------TTCCEEEEEESBSGGGCTTCGGGCBSSHHHHHHTSTTEEEECCCS
T ss_pred CCCEEEEeh-HHHHHHHHHHHHHH-HH--------hCCCeEEEEECCCccccCCCCcccCHHHHHHhcCCCCCEEEecCC
Confidence 8 7888886 78889999999986 44 5788888865 466556 899984 57789999999999999999
Q ss_pred HHHHHHHHHHhHcCCCcEEEeccccccCCCCCccccccCCCccccCCcEEEeeeCCc--EEEEEechhHHHHHHHHHHHH
Q 017695 184 SEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD--VTITAFSKIVGLSLKAAEILA 261 (367)
Q Consensus 184 ~~e~~~~~~~a~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~~Gk~~v~~~g~d--i~Iia~G~~v~~al~Aa~~L~ 261 (367)
++|++.+++++++.++|+++|.+|. ..| .++...+.+++||++++++|.| ++||++|++++.|++|+++|+
T Consensus 449 ~~e~~~~l~~a~~~~gp~~ir~~r~----~~p---~~~~~~~~~~~Gka~vl~eg~d~dv~iva~G~~v~~al~Aa~~L~ 521 (616)
T 3mos_A 449 GVATEKAVELAANTKGICFIRTSRP----ENA---IIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELLK 521 (616)
T ss_dssp HHHHHHHHHHHHTCCSEEEEECCSS----CCB---CCSCTTCCCCTTCCEEEECCSSEEEEEECCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCC----CCC---ccCCCcccccCCeEEEEEeCCCCCEEEEEeCHHHHHHHHHHHHHH
Confidence 9999999999999999999997764 222 2233445678899999999876 999999999999999999999
Q ss_pred hcCCceEEEEeeecCCCCHHHHHHHHhcC-CeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH--
Q 017695 262 KEGISAEVINLRSIRPLDRSTINASVRKT-NRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA-- 338 (367)
Q Consensus 262 ~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~-~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~-- 338 (367)
++||+++|||++|+||||+++|.++++++ ++|||+|||...||+|++|++.+.+++ +.|+.++|+++ |.+++
T Consensus 522 ~~Gi~v~Vidlr~l~PlD~e~i~~~~~~~~~~vvvvEe~~~~GG~G~~v~~~l~~~~----~~~v~~~g~~~-f~~~g~~ 596 (616)
T 3mos_A 522 KEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEP----GITVTHLAVNR-VPRSGKP 596 (616)
T ss_dssp TTTCEEEEEECSEEESCCHHHHHHHHHHTTTEEEEEEEEESTTSHHHHHHHHHTTCT----TCEEEEEEECS-CCCCSCH
T ss_pred hcCCCEEEEEeCccCCCCHHHHHHHHHhcCCEEEEEcCCCCCcCHHHHHHHHHHhcC----CCCEEEEeCCC-CCCCCCH
Confidence 99999999999999999999999999999 999999999999999999999998753 56899999996 55554
Q ss_pred HHHHHHhCCCHHHHHHHHHH
Q 017695 339 ANLERMAVPQVLCFLYDSSI 358 (367)
Q Consensus 339 ~~l~~~~~l~~~~I~~~~i~ 358 (367)
+.|++.++||+++|+++ |+
T Consensus 597 ~~l~~~~gl~~~~I~~~-i~ 615 (616)
T 3mos_A 597 AELLKMFGIDRDAIAQA-VR 615 (616)
T ss_dssp HHHHHHTTCSHHHHHHH-HT
T ss_pred HHHHHHHCcCHHHHHHH-Hh
Confidence 46777889999999999 75
No 10
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=5.9e-51 Score=423.50 Aligned_cols=284 Identities=14% Similarity=0.127 Sum_probs=239.5
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEe
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVE 113 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~~ 113 (367)
.++++|++++++|.++++.+|+++++++|++.++++. + .+.++|+|+||||+||+||+|+++|+|||++ |++||++
T Consensus 336 ~~~a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~~~~-~--~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~ 412 (632)
T 3l84_A 336 KDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTE-L--HSMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSA 412 (632)
T ss_dssp CCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC-C--TTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSCEEEEE
T ss_pred cchHHHHHHHHHHHHHHhhCCCEEEEecccCCccCcc-h--hcccccCCCCeEEeCccHHHHHHHHHHHHHcCCCEEEEE
Confidence 5789999999999999999999999999998665542 1 2236788999999999999999999999999 9999999
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEe-CCCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PNGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPYSSEDARGL 190 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (367)
+| +.|++|+++||++ .|+ +++||+++. .+|.+.| +|+||+ +.++++||++|||+|++|+|++|++.+
T Consensus 413 ~f-~~F~~~~~~~ir~-~a~--------~~~pv~~~~t~~g~g~G~dG~THq~~ed~a~lr~iP~l~V~~P~d~~e~~~~ 482 (632)
T 3l84_A 413 TF-FIFSEYLKPAARI-AAL--------MKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKA 482 (632)
T ss_dssp EE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCGGGSCSSHHHHHHHSSSCEEECCSSHHHHHHH
T ss_pred ec-HHHHHHHHHHHHH-Hhc--------cCCCEEEEEECCCcCCCCCCCCCCCHhHHHHHhcCCCCEEEecCCHHHHHHH
Confidence 95 7789999999986 676 699999996 4566566 899984 467799999999999999999999999
Q ss_pred HHHhHcCCCcEEEeccccccCCCCCccccccCC-CccccCCcE-EEeee--CCcEEEEEechhHHHHHHHHHHHHhcCCc
Q 017695 191 LKAAIRDPDPVVFLENELLYGESFPVSAEVLDS-SFCLPIGKA-KIERE--GKDVTITAFSKIVGLSLKAAEILAKEGIS 266 (367)
Q Consensus 191 ~~~a~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~-~~~~~~Gk~-~v~~~--g~di~Iia~G~~v~~al~Aa~~L~~~Gi~ 266 (367)
+++|++.++|+|||++|... ++.+ .+..+++++ +++++ |.|++||++|++++.|++|+++|+++||+
T Consensus 483 l~~A~~~~~Pv~ir~~r~~~---------~~~~~~~~~~~~~g~~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi~ 553 (632)
T 3l84_A 483 WQIALNADIPSAFVLSRQKL---------KALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFA 553 (632)
T ss_dssp HHHHHHCSSCEEEECCSSCB---------CCCCCCSBCCGGGSSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCEEEEEcCCCC---------CCCccccccccccccEEEEecCCCCEEEEEechHHHHHHHHHHHHHhcCCC
Confidence 99999999999999876521 1112 233445554 78888 89999999999999999999999999999
Q ss_pred eEEEEeeecCCCCHHH--HHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH--HHHH
Q 017695 267 AEVINLRSIRPLDRST--INASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA--ANLE 342 (367)
Q Consensus 267 v~vi~~~~i~P~d~~~--l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~--~~l~ 342 (367)
++|||++|++|||++. +++++.+ ++||++|++.. .||++ + .. .++|+ |.|+.++ +.|.
T Consensus 554 ~~Vi~~~~i~PlD~~~~~~~~sv~~-~~vv~vE~~~~-~g~~~----------~--~~---~~iGi-d~Fg~sg~~~~l~ 615 (632)
T 3l84_A 554 CNVVSMPCFELFEKQDKAYQERLLK-GEVIGVEAAHS-NELYK----------F--CH---KVYGI-ESFGESGKDKDVF 615 (632)
T ss_dssp EEEEECSBHHHHHTSCHHHHHHHCC-SEEEEECSSCC-GGGGG----------T--CS---EEECC-CSCCCSSCHHHHH
T ss_pred eEEEecCcCCCcchhHHHHHHHhcC-CCEEEEeCChh-hhHHH----------H--hC---eEEEc-CCCcccCCHHHHH
Confidence 9999999999999974 6677777 78999999975 45532 1 12 67999 8998775 5777
Q ss_pred HHhCCCHHHHHHHHHHH
Q 017695 343 RMAVPQVLCFLYDSSID 359 (367)
Q Consensus 343 ~~~~l~~~~I~~~~i~~ 359 (367)
++++||++.|+++ +++
T Consensus 616 ~~~Glt~~~I~~~-i~~ 631 (632)
T 3l84_A 616 ERFGFSVSKLVNF-ILS 631 (632)
T ss_dssp HHTTCSHHHHHHH-HTT
T ss_pred HHhCcCHHHHHHH-Hhh
Confidence 8889999999999 763
No 11
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.3e-51 Score=427.04 Aligned_cols=305 Identities=16% Similarity=0.124 Sum_probs=251.3
Q ss_pred cccccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccc-ccchhHHHHh-----CC----CceeechhhHHH
Q 017695 26 NLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKY-----GP----ERVLDTPITEAG 95 (367)
Q Consensus 26 ~~~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~-~~~~~~~~~~-----~p----~R~i~~GIaE~~ 95 (367)
....|....+++++|++++++|.+++++||+++++++|++.+++++ +.+.+|.++| +| +||||+||+||+
T Consensus 364 ~~p~~~~~~~~~atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~ 443 (700)
T 3rim_A 364 DLPHWEPGSKALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHA 443 (700)
T ss_dssp SCCCCCTTSSCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHH
T ss_pred hcccccccccchHHHHHHHHHHHHHHhhCCCEEEEeCCccCCCCcccccchhhcccccccccCCcccCCceeecCccHHH
Confidence 3445655457789999999999999999999999999998777753 2246788887 35 699999999999
Q ss_pred HHHHHHHHhcc-CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHh
Q 017695 96 FTGIGVGAAYY-GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYA 171 (367)
Q Consensus 96 ~vg~AaGlA~~-G~~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~ 171 (367)
|+++|+|||++ |++||++|| ..|+.++.+|||+ +|+ +++||+++.+ +|.+.| +|+||+ ..++++||
T Consensus 444 mv~~A~GlA~~gG~~Pv~~tF-~~F~d~~~~~ir~-~al--------~~lpvv~v~thdg~gvG~dG~THq~ied~a~lr 513 (700)
T 3rim_A 444 MGAILSGIVLHGPTRAYGGTF-LQFSDYMRPAVRL-AAL--------MDIDTIYVWTHDSIGLGEDGPTHQPIEHLSALR 513 (700)
T ss_dssp HHHHHHHHHHHSSCEEEEEEE-GGGGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTSCSSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEec-HHHHHHHHHHHHH-hcC--------CCCCEEEEEeCCCcccCCCCCccCChhHHHHHh
Confidence 99999999999 999999986 5677788889886 676 6999999975 566566 899994 46679999
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhHcCC---CcEEEeccccccCCCCCccccccCC-CccccCCcEEEeeeCC--------
Q 017695 172 SVPGLKVLSPYSSEDARGLLKAAIRDP---DPVVFLENELLYGESFPVSAEVLDS-SFCLPIGKAKIEREGK-------- 239 (367)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~~~~a~~~~---~Pv~ir~~~~~~~~~~~~~~~~~~~-~~~~~~Gk~~v~~~g~-------- 239 (367)
++|||+|++|+|++|++.++++|++.+ +|++||++|... | .++.+ .+.+++|+ +++++|+
T Consensus 514 ~iPnl~V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~~----~---~~~~~~~~~~~~G~-~vlr~g~~~~~~~~~ 585 (700)
T 3rim_A 514 AIPRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQGV----P---VLDGTDAEGVARGG-YVLSDAGGLQPGEEP 585 (700)
T ss_dssp TSTTCEEECCSSHHHHHHHHHHHHTTTTCSSCEEEECCSSEE----C---CCTTCCHHHHHHSC-EEEECCSCCCTTCCC
T ss_pred cCCCCEEEeCCCHHHHHHHHHHHHHccCCCCCEEEEeccccC----C---CcCcccccccCCCc-EEEecCCccccCCCC
Confidence 999999999999999999999999986 599999887522 1 22223 35678898 6889986
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHH--HHHHHHhc--CCeEEEEeCCCCCCchHHHHHHHHHH
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS--TINASVRK--TNRLVTVEEGFPQHGVGAEICASVIE 315 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~--~l~~~~~~--~~~ivvvEe~~~~GGlg~~v~~~l~~ 315 (367)
|++||++|++++.|++|+++|+++||+++|||++|++|||.+ .+++.+.+ ++++|++|++...|+ .+++.+
T Consensus 586 dvtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~-----~~~~~~ 660 (700)
T 3rim_A 586 DVILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCW-----HQLVGD 660 (700)
T ss_dssp SEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGG-----HHHHCT
T ss_pred CEEEEEechHHHHHHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceEEEEEeCCCchhH-----HHHHhc
Confidence 999999999999999999999999999999999999999994 44455543 678999999987654 234422
Q ss_pred hccCCCCCCeEEEecCCCCCCCH--HHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 316 ESFGYLDAPVERIAGADVPMPYA--ANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 316 ~~~~~~~~~v~~ig~~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
+ ..++|+ |.|+.++ +.|.++++||++.|+++ |++++++
T Consensus 661 ~--------~~~igi-d~Fg~sg~~~~l~~~~Glt~e~I~~~-i~~~l~~ 700 (700)
T 3rim_A 661 T--------GEIVSI-EHYGESADHKTLFREYGFTAEAVAAA-AERALDN 700 (700)
T ss_dssp T--------CEEECC-CSCCCSSCHHHHHHHTTCSHHHHHHH-HHHHHC-
T ss_pred C--------CcEEcc-CcCcCcCCHHHHHHHhCcCHHHHHHH-HHHHhhC
Confidence 1 357999 8898774 57778889999999999 9998864
No 12
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=3.5e-51 Score=428.54 Aligned_cols=301 Identities=17% Similarity=0.154 Sum_probs=244.8
Q ss_pred ccccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccc-ccchhHHHHhCCCceeechhhHHHHHHHHHHHhc
Q 017695 27 LRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAY 105 (367)
Q Consensus 27 ~~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~-~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~ 105 (367)
...|.. ++++++|++++++|.++++++|+++++++|++.+++++ +.+++|.++|+|+||||+||+||+|+++|+|||+
T Consensus 370 ~~~~~~-~~~~a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~ 448 (690)
T 3m49_A 370 LPTYEL-GSKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIAL 448 (690)
T ss_dssp CCCCCT-TCEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHH
T ss_pred cccccc-ccchHHHHHHHHHHHHHHhhCCCEEEEeCcccccCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHH
Confidence 334544 36789999999999999999999999999999887764 4567788887799999999999999999999999
Q ss_pred c-CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEee
Q 017695 106 Y-GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLSP 181 (367)
Q Consensus 106 ~-G~~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P 181 (367)
+ |+|||++||. .|+.++..|||+ +|+ +++||+++.+ +|.+.| +|+||+ +.++++||++|||+|++|
T Consensus 449 ~gG~~P~~~tf~-~Fs~f~~~air~-~al--------~~lpVv~v~~~~gigvG~dG~THq~ied~a~lr~iPnl~V~~P 518 (690)
T 3m49_A 449 HGGLKTYGGTFF-VFSDYLRPAIRL-AAL--------MQLPVTYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRP 518 (690)
T ss_dssp HSSCEEEEEEEG-GGGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCGGGCCSSHHHHHHTSTTCEEECC
T ss_pred cCCCEEEEEecH-HHHHHHHHHHHH-HHh--------cCCCcEEEEECCCcCCCCCCCccCCHHHHHHHhcCCCCEEEee
Confidence 9 8999999863 233333345765 676 6999999986 466566 999995 467799999999999999
Q ss_pred CCHHHHHHHHHHhHcC-CCcEEEeccccccCCCCCccccccCC----CccccCCcEEEeeeCC----cEEEEEechhHHH
Q 017695 182 YSSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDS----SFCLPIGKAKIEREGK----DVTITAFSKIVGL 252 (367)
Q Consensus 182 ~d~~e~~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~----~~~~~~Gk~~v~~~g~----di~Iia~G~~v~~ 252 (367)
+|++|++.++++|++. ++|++||++|... | .++.+ .+.++.|+ +++++|+ |++||++|++++.
T Consensus 519 ad~~E~~~~l~~Ai~~~~~Pv~ir~~R~~~----p---~~~~~~~~~~~~~~~G~-~vlr~g~~g~~dvtiia~G~~v~~ 590 (690)
T 3m49_A 519 ADGNESVAAWRLALESTNKPTALVLTRQDL----P---TLEGAKDDTYEKVAKGA-YVVSASKKETADVILLATGSEVSL 590 (690)
T ss_dssp SSHHHHHHHHHHHHHCSSSCEEEECCSSEE----E---CCHHHHTTHHHHHHTSC-EEEECCSSSSCSEEEEECTTHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEeecccC----C---CCCccccccccccCCCe-EEEEecCCCCCCEEEEEechHHHH
Confidence 9999999999999998 7999999887522 1 11111 24577887 6788875 9999999999999
Q ss_pred HHHHHHHHHhcCCceEEEEeeecCCCCH--HHHHHHHh--cCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEE
Q 017695 253 SLKAAEILAKEGISAEVINLRSIRPLDR--STINASVR--KTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERI 328 (367)
Q Consensus 253 al~Aa~~L~~~Gi~v~vi~~~~i~P~d~--~~l~~~~~--~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~i 328 (367)
|++|+++|+++||+++|||++|++|||. +.+++++. +++++|++|++...| +. +++.. ....+
T Consensus 591 Al~Aa~~L~~~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G-~~----~~~~~--------~~~~i 657 (690)
T 3m49_A 591 AVEAQKALAVDGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFG-WH----RYVGL--------EGDVL 657 (690)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTT-TH----HHHTT--------TCEEE
T ss_pred HHHHHHHHHhcCCCeEEEecccCCcCccccHHHHHHHhhccCCeEEEEECCchhh-HH----HHhcc--------CCCEE
Confidence 9999999999999999999999999986 45555554 578899999998766 32 33322 12468
Q ss_pred ecCCCCCCCH--HHHHHHhCCCHHHHHHHHHHHHh
Q 017695 329 AGADVPMPYA--ANLERMAVPQVLCFLYDSSIDGC 361 (367)
Q Consensus 329 g~~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~~l 361 (367)
|+ |.|+.++ +.|.++++||++.|+++ |+++|
T Consensus 658 gi-d~Fg~sg~~~~l~~~~Glt~e~I~~~-i~~~l 690 (690)
T 3m49_A 658 GI-DTFGASAPGEKIMEEYGFTVENVVRK-VKEML 690 (690)
T ss_dssp CC-CSCCCSSCHHHHHHHTTCSHHHHHHH-HHHHC
T ss_pred cc-CcCcCcCCHHHHHHHHCcCHHHHHHH-HHHhC
Confidence 88 8898764 57778899999999999 98864
No 13
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=5.4e-51 Score=428.03 Aligned_cols=294 Identities=19% Similarity=0.157 Sum_probs=248.2
Q ss_pred cccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccc-ccchhHHHH---hCC---CceeechhhHHHHHHHHHHHhcc
Q 017695 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEK---YGP---ERVLDTPITEAGFTGIGVGAAYY 106 (367)
Q Consensus 34 ~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~-~~~~~~~~~---~~p---~R~i~~GIaE~~~vg~AaGlA~~ 106 (367)
++++++|+|++++|.++++.+|+++++++|++.+++++ +.+.+|.++ | | +||||+||+||+|+++|+|||++
T Consensus 392 ~~~~atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~-p~~~~R~~d~GIaE~~mv~~AaGlA~~ 470 (711)
T 3uk1_A 392 GETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGP-GVQWGNHINYGVREFGMSAAINGLVLH 470 (711)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEECSSSS-SEECCSEEECCSCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhhCCCEEEEeccccCcCCcccccchhhhhhhccC-CCCCCcEEEeCccHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999998776663 234578888 9 8 99999999999999999999995
Q ss_pred -CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeC
Q 017695 107 -GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPY 182 (367)
Q Consensus 107 -G~~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~ 182 (367)
|++||+++| +.|++|+++||++ .|+ +++||+++.+ +|.+.| +|+||+ +.++++||++||++|++|+
T Consensus 471 ~G~~Pv~~~f-~~F~~~~~~~ir~-~a~--------~~lpv~~v~thdg~gvG~dG~THq~~ed~a~lr~iPnl~V~~Pa 540 (711)
T 3uk1_A 471 GGYKPFGGTF-LTFSDYSRNALRV-AAL--------MKVPSIFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPA 540 (711)
T ss_dssp SSCEEEEEEE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCS
T ss_pred CCCEEEEEEh-HHHHHHHHHHHHH-hhh--------cCCCEEEEEECCCcCcCCCCCccCChhHHHHHhcCCCCEEEecC
Confidence 999999995 7899999999986 566 6899999875 566556 999994 4677999999999999999
Q ss_pred CHHHHHHHHHHhHcCCCcEEEeccccccCCCCCccccccCCC---ccccCCcEEEeee--C----CcEEEEEechhHHHH
Q 017695 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSS---FCLPIGKAKIERE--G----KDVTITAFSKIVGLS 253 (367)
Q Consensus 183 d~~e~~~~~~~a~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~---~~~~~Gk~~v~~~--g----~di~Iia~G~~v~~a 253 (367)
|++|++.++++|++.++|+|||++|... | .++.++ +.++.|++ ++++ | .|++||++|++++.|
T Consensus 541 d~~E~~~~l~~Ai~~~~Pv~ir~~r~~~----p---~~~~~~~~~~~i~~G~~-vl~~~~G~~~~~dvtiia~G~~v~~a 612 (711)
T 3uk1_A 541 DTVETAVAWTYAVAHQHPSCLIFSRQNL----A---FNARTDAQLANVEKGGY-VLRDWDEEIVARKIILIATGSEVELA 612 (711)
T ss_dssp SHHHHHHHHHHHHHSSSCEEEECCSSEE----C---CCCCCHHHHHHGGGSSE-EEECCCSSCCSEEEEEEECTTHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeeCCCC----C---CCCCccccccccCCCeE-EEEecCCCCCCCCEEEEEecHHHHHH
Confidence 9999999999999999999999876522 2 122222 45778885 6664 7 799999999999999
Q ss_pred HHHHHHHHhcCCceEEEEeeecCCCCHHH--HHHHHhcCC-eEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEec
Q 017695 254 LKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKTN-RLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAG 330 (367)
Q Consensus 254 l~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~--l~~~~~~~~-~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~ 330 (367)
++|+++|+++||+++|||++|++|||++. +++++.++. .+|++|++.. +||++.+ . .+..++|+
T Consensus 613 l~Aa~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~~V~vE~~~~-~g~~~~~----g--------~~~~~iGi 679 (711)
T 3uk1_A 613 MKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVT-DFWRKYV----G--------LEGGVVGI 679 (711)
T ss_dssp HHHHHHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCS-GGGHHHH----T--------TTSEEECC
T ss_pred HHHHHHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCCeEEEEeCCcc-ccHHHHh----C--------CCceEEEe
Confidence 99999999999999999999999999986 567787776 4899999875 5676533 1 23467998
Q ss_pred CCCCCCCH--HHHHHHhCCCHHHHHHHHHHHHh
Q 017695 331 ADVPMPYA--ANLERMAVPQVLCFLYDSSIDGC 361 (367)
Q Consensus 331 ~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~~l 361 (367)
|.|+.++ +.|.+++++|++.|+++ ++++|
T Consensus 680 -d~Fg~sg~~~~L~~~~Glt~e~Iv~~-~~~~l 710 (711)
T 3uk1_A 680 -DTFGESAPAGVLFKHFGFTVEHVIET-AKAVL 710 (711)
T ss_dssp -CSCCCSSCHHHHHHHTTCSHHHHHHH-HHHHH
T ss_pred -CCCcCcCCHHHHHHHHCcCHHHHHHH-HHHHh
Confidence 8898764 57888899999999999 99876
No 14
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=2.8e-49 Score=415.27 Aligned_cols=298 Identities=17% Similarity=0.199 Sum_probs=247.1
Q ss_pred cccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccc-cchhHHH-HhCCCceeechhhHHHHHHHHHHHhc
Q 017695 28 RNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYK-ISKGLLE-KYGPERVLDTPITEAGFTGIGVGAAY 105 (367)
Q Consensus 28 ~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~-~~~~~~~-~~~p~R~i~~GIaE~~~vg~AaGlA~ 105 (367)
..|...++++++|++++++|.++++.+|+++++++|++.++++.. -+..|.+ +| |+||||+||+||+|+++|+|||+
T Consensus 357 ~~~~~~~~~~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~GlA~ 435 (675)
T 1itz_A 357 PKYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGIAL 435 (675)
T ss_dssp CCCCTTSCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHHHT
T ss_pred hhhccCCcchHHHHHHHHHHHHHHHhCCCEEEEeccccccccccccccccccccCC-CCCeEeecccHHHHHHHHHHHHh
Confidence 344333467899999999999999999999999999987766531 1124776 89 99999999999999999999999
Q ss_pred cC--CeeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEe
Q 017695 106 YG--LKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLS 180 (367)
Q Consensus 106 ~G--~~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~ 180 (367)
+| ++||+++| +.|+.++++||++ +|+ +++||+++.+ +|.+.| +|+||+ ..+.++++++||++|++
T Consensus 436 ~G~~~~P~~~t~-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~ 505 (675)
T 1itz_A 436 HSPGFVPYCATF-FVFTDYMRGAMRI-SAL--------SEAGVIYVMTHDSIGLGEDGPTHQPIEHLVSFRAMPNILMLR 505 (675)
T ss_dssp TCTTCEEEEEEE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHSSSSCEEEC
T ss_pred cCCCCEEEEEEH-HHHHHHHHHHHHH-HHh--------cCCCEEEEEECCccccCCCCCCcCcHHHHHHhccCCCeEEEE
Confidence 99 99999996 6677899999987 665 6899999974 566666 999993 24559999999999999
Q ss_pred eCCHHHHHHHHHHhHcC-CCcEEEeccccccCCCCCccccccCCCc-cccCCcEEEeee---C--CcEEEEEechhHHHH
Q 017695 181 PYSSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIERE---G--KDVTITAFSKIVGLS 253 (367)
Q Consensus 181 P~d~~e~~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~-~~~~Gk~~v~~~---g--~di~Iia~G~~v~~a 253 (367)
|+|++|++.++++|++. ++|++||++|.. .| .++.+.+ .+++| ++++++ | .|++||++|++++.|
T Consensus 506 Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~~----~p---~~~~~~~~~~~~G-a~vl~~~~~G~~~dv~iva~G~~v~~a 577 (675)
T 1itz_A 506 PADGNETAGAYKVAVLNRKRPSILALSRQK----LP---HLPGTSIEGVEKG-GYTISDNSTGNKPDLIVMGTGSELEIA 577 (675)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEEECSSC----BC---CCTTCCHHHHTTS-SEEEEECCSTTCCSEEEEECGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEEEecCCC----CC---CCCCccccccccC-CEEEecccCCCCCCEEEEEECHHHHHH
Confidence 99999999999999997 999999988752 21 2223334 47788 577887 7 899999999999999
Q ss_pred HHHHHHHHhcCCceEEEEeeecCCCCHHH--HHHHHhcC--CeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEe
Q 017695 254 LKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKT--NRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIA 329 (367)
Q Consensus 254 l~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~--l~~~~~~~--~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig 329 (367)
++|+++|+++||+++|||++|++|||++. +++.+.++ +++|++|++.. +||++. + ..+..++|
T Consensus 578 l~Aa~~L~~~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~G~~~~----~--------~~~~~~ig 644 (675)
T 1itz_A 578 AKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGST-LGWQKY----V--------GAQGKAIG 644 (675)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCC-TTTHHH----H--------CSSCEEEC
T ss_pred HHHHHHHHhcCCcEEEEEeccCcccccchHHHHHHHhccCCceEEEEECCcc-ccHHHh----c--------CCCceEEE
Confidence 99999999999999999999999999885 44555555 68999999987 788763 2 23567899
Q ss_pred cCCCCCCCH--HHHHHHhCCCHHHHHHHHHHH
Q 017695 330 GADVPMPYA--ANLERMAVPQVLCFLYDSSID 359 (367)
Q Consensus 330 ~~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~ 359 (367)
+ |.|+.++ +.|++++++|++.|+++ |++
T Consensus 645 ~-d~fg~sg~~~~l~~~~gl~~~~I~~~-i~~ 674 (675)
T 1itz_A 645 I-DKFGASAPAGTIYKEYGITVESIIAA-AKS 674 (675)
T ss_dssp C-CSCCCSSCHHHHHHHHTCSHHHHHHH-HTT
T ss_pred e-CCCCCCCCHHHHHHHHCcCHHHHHHH-HHh
Confidence 9 8888664 56888889999999999 865
No 15
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=1.4e-49 Score=417.99 Aligned_cols=299 Identities=18% Similarity=0.192 Sum_probs=246.0
Q ss_pred ccccccccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccc--ccchhHHH------HhCCCceeechhhHHHHHH
Q 017695 27 LRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY--KISKGLLE------KYGPERVLDTPITEAGFTG 98 (367)
Q Consensus 27 ~~~~~~~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~--~~~~~~~~------~~~p~R~i~~GIaE~~~vg 98 (367)
+..|...++++++|++++++|.++++++|+++++++|++.+++++ ++ ..|.+ +| |+||||+||+||+|++
T Consensus 346 ~~~~~~~~~~~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~-~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg 423 (680)
T 1gpu_A 346 LPTYTAKDSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEA-LDFQPPSSGSGNY-SGRYIRYGIREHAMGA 423 (680)
T ss_dssp SCCCCTTSCCBCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTC-CEECCTTTSSEET-TCCEEECCSCHHHHHH
T ss_pred chhhccCCcchHHHHHHHHHHHHHHhhCCCEEEEecccccccccccccc-cccccccccccCC-CCceecCCccHHHHHH
Confidence 334423356789999999999999999999999999998877664 22 35777 89 9999999999999999
Q ss_pred HHHHHhccC-Ce-eEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcC
Q 017695 99 IGVGAAYYG-LK-PVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASV 173 (367)
Q Consensus 99 ~AaGlA~~G-~~-p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~i 173 (367)
+|+|||++| ++ ||+++| ..|+.++++|||+ .|+ +++||+++.+ +|...| +|+||+ ..++++||++
T Consensus 424 ~a~GlA~~Gg~~~P~~~~f-~~F~~~~~~air~-~a~--------~~lpvv~v~t~~g~g~G~dG~tHq~~edla~lr~i 493 (680)
T 1gpu_A 424 IMNGISAFGANYKPYGGTF-LNFVSYAAGAVRL-SAL--------SGHPVIWVATHDSIGVGEDGPTHQPIETLAHFRSL 493 (680)
T ss_dssp HHHHHHHHCTTCEEEEEEE-HHHHGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTS
T ss_pred HHHHHHhcCCCceEEEeeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCccccCCCCCccCCHHHHHHhcCC
Confidence 999999998 99 999986 6677899999987 676 6899999974 566666 999993 2456999999
Q ss_pred CCcEEEeeCCHHHHHHHHHHhHcC-CCcEEEeccccccCCCCCccccccCCCcc-ccCCcEEEeeeC--CcEEEEEechh
Q 017695 174 PGLKVLSPYSSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSFC-LPIGKAKIEREG--KDVTITAFSKI 249 (367)
Q Consensus 174 P~~~V~~P~d~~e~~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~-~~~Gk~~v~~~g--~di~Iia~G~~ 249 (367)
||++|++|+|++|++.++++|++. ++|++||++|... | .++.+++. +++| .+++++| .|++||++|++
T Consensus 494 P~l~V~~Pad~~e~~~~l~~A~~~~~~Pv~i~~~r~~~----~---~~~~~~~~~~~~G-~~vl~~g~~~dvtiva~G~~ 565 (680)
T 1gpu_A 494 PNIQVWRPADGNEVSAAYKNSLESKHTPSIIALSRQNL----P---QLEGSSIESASKG-GYVLQDVANPDIILVATGSE 565 (680)
T ss_dssp SSCEEECCCSHHHHHHHHHHHHHCSSCCEEEECCSSCB----C---CCTTCCHHHHTTS-CEEEECCSSCSEEEEECTHH
T ss_pred CCCEEEecCCHHHHHHHHHHHHHhCCCcEEEEecCCCC----C---CCCCcchhhccCC-CEEEecCCCCCEEEEEEcHH
Confidence 999999999999999999999997 9999999887522 1 22233344 6778 4788887 89999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEEEeeecCCCCHHH--HHHHHhcCC-eEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeE
Q 017695 250 VGLSLKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKTN-RLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVE 326 (367)
Q Consensus 250 v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~--l~~~~~~~~-~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~ 326 (367)
++.|++|+++|+++||+++|||++|++|||++. +.+++.+++ ++|++|++.. +|+++++ . .
T Consensus 566 v~~al~Aa~~L~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~v~vE~~~~-~g~~~~v------------~--~- 629 (680)
T 1gpu_A 566 VSLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLAT-TCWGKYA------------H--Q- 629 (680)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCS-TTGGGTC------------S--E-
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCceEEEeCCcc-ccHHHhc------------C--c-
Confidence 999999999999999999999999999999985 556666654 5599999987 7876532 1 1
Q ss_pred EEecCCCCCCCH--HHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 327 RIAGADVPMPYA--ANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 327 ~ig~~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
++|+ |.|..++ ..|++++++|++.|+++ |+++++.
T Consensus 630 ~~gv-~~f~~~g~~~~l~~~~gl~~~~I~~~-i~~~l~~ 666 (680)
T 1gpu_A 630 SFGI-DRFGASGKAPEVFKFFGFTPEGVAER-AQKTIAF 666 (680)
T ss_dssp EECC-CSCCCCSCHHHHHHHTTCSHHHHHHH-HHHHHHH
T ss_pred ceee-CcCCCCCCHHHHHHHHCcCHHHHHHH-HHHHHHh
Confidence 2777 5666442 56888889999999999 9998853
No 16
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=9.8e-50 Score=418.61 Aligned_cols=297 Identities=17% Similarity=0.127 Sum_probs=247.7
Q ss_pred ccccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccc-ccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCee
Q 017695 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP 110 (367)
Q Consensus 33 ~~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~-~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p 110 (367)
.++++++|++++++|.++++.+|+++++++|++.+++++ +.+..|.++| |+||||+||+||+|+++|+|||++ |++|
T Consensus 351 ~~~~~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P 429 (669)
T 2r8o_A 351 NPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLP 429 (669)
T ss_dssp SCCCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CCccHHHHHHHHHHHHHHHhhCCCeEEecCcccccccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeE
Confidence 346789999999999999999999999999998887765 3345788999 999999999999999999999999 8999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeCCHHHH
Q 017695 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPYSSEDA 187 (367)
Q Consensus 111 ~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~d~~e~ 187 (367)
|+++| +.|+.++++||++ +|+ +++||+++.+ +|.+.| +|+||+ ..+.+++|++||++|++|+|++|+
T Consensus 430 ~~~tf-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~~~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~ 499 (669)
T 2r8o_A 430 YTSTF-LMFVEYARNAVRM-AAL--------MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVES 499 (669)
T ss_dssp EEEEE-GGGGGTTHHHHHH-HHH--------TTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHH
T ss_pred EEeeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCCcCcCCCCCccCCHHHHHHhcCCCCCEEEecCCHHHH
Confidence 99986 6677799999988 665 6899999986 566666 999994 245699999999999999999999
Q ss_pred HHHHHHhHcC-CCcEEEeccccccCCCCCccccccCCCc---cccCCcEEEeee--C-CcEEEEEechhHHHHHHHHHHH
Q 017695 188 RGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF---CLPIGKAKIERE--G-KDVTITAFSKIVGLSLKAAEIL 260 (367)
Q Consensus 188 ~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~---~~~~Gk~~v~~~--g-~di~Iia~G~~v~~al~Aa~~L 260 (367)
+.++++|++. ++|+|||++|..+. .++.+++ .+++|+ +++++ | .|++||++|++++.|++|+++|
T Consensus 500 ~~~l~~a~~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~~~G~-~vl~~~~g~~dv~iva~G~~v~~al~Aa~~L 571 (669)
T 2r8o_A 500 AVAWKYGVERQDGPTALILSRQNLA-------QQERTEEQLANIARGG-YVLKDCAGQPELIFIATGSEVELAVAAYEKL 571 (669)
T ss_dssp HHHHHHHHHCSSSCEEEECCSSEEC-------CCCCCHHHHHHGGGSC-EEEECCSSSCSEEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEeCCCCCC-------CCCCccchhhhccCCC-EEEeccCCCCCEEEEEECHHHHHHHHHHHHH
Confidence 9999999997 89999998876432 2222222 266785 67887 7 8999999999999999999999
Q ss_pred HhcCCceEEEEeeecCCCCHHH---HHHHHhcC-CeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCC
Q 017695 261 AKEGISAEVINLRSIRPLDRST---INASVRKT-NRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMP 336 (367)
Q Consensus 261 ~~~Gi~v~vi~~~~i~P~d~~~---l~~~~~~~-~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~ 336 (367)
+++||+++|||++|++|||++. +.+.+++. +++|++|++.. +||++ ++.++ ..++|+ |.|+.
T Consensus 572 ~~~Gi~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~g~~~----~~~~~--------~~~ig~-d~fg~ 637 (669)
T 2r8o_A 572 TAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIA-DYWYK----YVGLN--------GAIVGM-TTFGE 637 (669)
T ss_dssp HHHTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEG-GGGHH----HHTTS--------SEEEEE-CSCCC
T ss_pred HhcCCCeEEEEeccCCccccchHHHHHHhccccCceEEEEeCCch-hhHHH----HhcCC--------CeEEEc-CCCCC
Confidence 9999999999999999999885 55555442 68999999987 78875 33221 156888 67887
Q ss_pred CH--HHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 337 YA--ANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 337 ~~--~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
++ +.|.+++++|++.|+++ ++++|..
T Consensus 638 sg~~~~l~~~~Gl~~~~I~~~-~~~~~~~ 665 (669)
T 2r8o_A 638 SAPAELLFEEFGFTVDNVVAK-AKELLHH 665 (669)
T ss_dssp SSCHHHHHHHTTCSHHHHHHH-HHHHC--
T ss_pred cCCHHHHHHHhCCCHHHHHHH-HHHHHhh
Confidence 64 67888899999999999 9998853
No 17
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-49 Score=417.05 Aligned_cols=291 Identities=18% Similarity=0.104 Sum_probs=243.0
Q ss_pred cccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccc-cchhHHH-HhCCCceeechhhHHHHHHHHHHHhccC-Cee
Q 017695 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYK-ISKGLLE-KYGPERVLDTPITEAGFTGIGVGAAYYG-LKP 110 (367)
Q Consensus 34 ~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~-~~~~~~~-~~~p~R~i~~GIaE~~~vg~AaGlA~~G-~~p 110 (367)
++++++|++++++|.++++++|+++++++|++.+++++. .+.+|.+ +| |+||||+||+||+|+++|+|||++| ++|
T Consensus 346 ~~~~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~GlA~~Gg~~P 424 (651)
T 2e6k_A 346 DKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILNGLNLHGGYRA 424 (651)
T ss_dssp CSCBCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CccHHHHHHHHHHHHHHHhhCCCEEEEeCccccccccccccccccCccCC-CCceEecCcCHHHHHHHHHHHHHcCCCEE
Confidence 357899999999999999999999999999987776642 3456887 99 9999999999999999999999998 999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEe-CCCCCCC-CCCCchh-HHHHHHhcCCCcEEEeeCCHHHH
Q 017695 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PNGAAAG-VGAQHSH-CYAAWYASVPGLKVLSPYSSEDA 187 (367)
Q Consensus 111 ~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~G~~~g-~G~tH~~-~~~a~~~~iP~~~V~~P~d~~e~ 187 (367)
|++|| ..|+.++++||+. .|+ +++||+++. ++|.+.| +|+||+. .+.+++|++|||+|++|+|++|+
T Consensus 425 ~~~t~-~~F~~~~~~air~-~a~--------~~lpvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~E~ 494 (651)
T 2e6k_A 425 YGGTF-LVFSDYMRPAIRL-AAL--------MGVPTVFVFTHDSIALGEDGPTHQPVEHLMSLRAMPNLFVIRPADAYET 494 (651)
T ss_dssp EEEEE-GGGGGGSHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCSSHHHH
T ss_pred EEEeH-HHHHHHHHHHHHH-HHh--------cCCCEEEEEECCccccCCCcCccccHHHHHHhcCCCCcEEEecCCHHHH
Confidence 99997 5566688899876 665 689999995 4666667 9999932 44599999999999999999999
Q ss_pred HHHHHHhHcC-CCcEEEeccccccCCCCCccccccCCCc-cccCCcEEEeeeC--CcEEEEEechhHHHHHHHHHHHHhc
Q 017695 188 RGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIEREG--KDVTITAFSKIVGLSLKAAEILAKE 263 (367)
Q Consensus 188 ~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~-~~~~Gk~~v~~~g--~di~Iia~G~~v~~al~Aa~~L~~~ 263 (367)
+.++++|++. ++|++||++|..+. .++.+++ .++.| ++++++| .|++||++|++++.|++|+++|+++
T Consensus 495 ~~~l~~A~~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~G-~~vl~~g~~~dv~iva~G~~v~~al~Aa~~L~~~ 566 (651)
T 2e6k_A 495 FYAWLVALRRKEGPTALVLTRQAVP-------LLSPEKARGLLRG-GYVLEDVEEPQGVLVATGSEVHLALRAQALLREK 566 (651)
T ss_dssp HHHHHHHHHCCSSCEEEECCSSCBC-------CCCHHHHGGGGGS-SEEEECCSSCSEEEEECTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCEEEEEeCCCCC-------CCCcchhhhhcCC-CEEEeeCCCCCEEEEEECHHHHHHHHHHHHHHhc
Confidence 9999999997 89999998876331 1221222 35677 4678887 8999999999999999999999999
Q ss_pred CCceEEEEeeecCCCCHHH---HHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH--
Q 017695 264 GISAEVINLRSIRPLDRST---INASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA-- 338 (367)
Q Consensus 264 Gi~v~vi~~~~i~P~d~~~---l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~-- 338 (367)
||+++|||++|++|||.+. +.+.++.++++||+|++.. +|+++.+ + .++|+ |.|++++
T Consensus 567 Gi~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~~vv~vE~~~~-~G~~~~v--------------~-~~ig~-d~f~~sg~~ 629 (651)
T 2e6k_A 567 GVRVRVVSLPSFELFAAQPEAYRKEVLPPGLPVVAVEAGAS-LGWERYA--------------H-KVVAL-DRFGASAPY 629 (651)
T ss_dssp TCCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC--------------S-EEECC-CSCCCSCCT
T ss_pred CCcEEEEecCcCCccccccHHHHHHHhCcCCeEEEEeCCcc-CchHHhC--------------C-CEEEe-CCCCCCCCH
Confidence 9999999999999999985 4444444578999999987 7776432 2 78999 8898664
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHh
Q 017695 339 ANLERMAVPQVLCFLYDSSIDGC 361 (367)
Q Consensus 339 ~~l~~~~~l~~~~I~~~~i~~~l 361 (367)
+.|++++++|++.|+++ +++++
T Consensus 630 ~~l~~~~gl~~~~I~~~-i~~~l 651 (651)
T 2e6k_A 630 PEVYERLGFTPERVAEA-FLSLV 651 (651)
T ss_dssp THHHHHTTCCHHHHHHH-HHTTC
T ss_pred HHHHHHhCCCHHHHHHH-HHHhC
Confidence 56888899999999999 98764
No 18
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=4.1e-49 Score=411.97 Aligned_cols=295 Identities=19% Similarity=0.143 Sum_probs=242.1
Q ss_pred cccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccc-cccchhHH-HHhCCCceeechhhHHHHHHHHHHHhcc-CCee
Q 017695 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGA-YKISKGLL-EKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP 110 (367)
Q Consensus 34 ~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~-~~~~~~~~-~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p 110 (367)
.+++++|+|++++|.++++.+|+++++++|++.++++ ++.+.+|. ++| |+||||+||+||+|+++|+|||++ |+||
T Consensus 352 ~~~~a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~~P 430 (663)
T 3kom_A 352 PVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGIKP 430 (663)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CcchhHHHHHHHHHHHHHhhCCCEEEEecccCCCCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCCEE
Confidence 4678999999999999999999999999999987766 44456785 899 999999999999999999999999 9999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEe-CCCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeCCHHHH
Q 017695 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PNGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPYSSEDA 187 (367)
Q Consensus 111 ~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~d~~e~ 187 (367)
|++|| +.|++++++||++ +|+ +++||+++. ++|.+.| +|+||+ +.++++||++||++|++|+|++|+
T Consensus 431 ~~~tf-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~g~G~dG~THq~~ed~a~lr~iPnl~V~~Pad~~e~ 500 (663)
T 3kom_A 431 YGGTF-LVFSDYSRNAIRM-SAL--------MKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIET 500 (663)
T ss_dssp EEEEE-GGGHHHHHHHHHH-HHH--------TTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCCSHHHH
T ss_pred EEEeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCccccCCCCCCcCCHHHHHHHhcCCCcEEEeeCCHHHH
Confidence 99995 7889999999986 666 699999996 4566566 899984 467799999999999999999999
Q ss_pred HHHHHHhHc-CCCcEEEeccccccCCCCCccccccCCC---ccccCCcEEEeee--CCcEEEEEechhHHHHHHHHHHHH
Q 017695 188 RGLLKAAIR-DPDPVVFLENELLYGESFPVSAEVLDSS---FCLPIGKAKIERE--GKDVTITAFSKIVGLSLKAAEILA 261 (367)
Q Consensus 188 ~~~~~~a~~-~~~Pv~ir~~~~~~~~~~~~~~~~~~~~---~~~~~Gk~~v~~~--g~di~Iia~G~~v~~al~Aa~~L~ 261 (367)
+.++++|++ .++|++||++|.. .| .++.++ +.++.|+ +++++ |.|++||++|++++.|++|+++|+
T Consensus 501 ~~~l~~A~~~~~~Pv~ir~~r~~----~p---~~~~~~~~~~~~~~G~-~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~ 572 (663)
T 3kom_A 501 MIAWKEAVKSKDTPSVMVLTRQN----LM---PVVQTQHQVANIARGG-YLVKDNPDAKLTIVATGSEVELAVKVANEFE 572 (663)
T ss_dssp HHHHHHHHHCSSCCEEEECCSSE----EC---CCCCCHHHHHHHTTTC-EEEECCTTCSCEEEECTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEccCcc----CC---CcCccccchhcccCce-EEEEecCCCCEEEEEecHHHHHHHHHHHHHH
Confidence 999999999 7999999987652 11 122222 2456674 56676 799999999999999999999999
Q ss_pred hcCCceEEEEeeecCCCCHHH--HHHHHhcC-CeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH
Q 017695 262 KEGISAEVINLRSIRPLDRST--INASVRKT-NRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA 338 (367)
Q Consensus 262 ~~Gi~v~vi~~~~i~P~d~~~--l~~~~~~~-~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~ 338 (367)
++||+++|||++|++|||++. +++++.++ ..+|++|++.. .||.+.+ .+ .....+|+ |.|+.++
T Consensus 573 ~~Gi~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~~v~vE~~~~-~g~~~~~---------gG--~~~~~igi-d~Fg~sg 639 (663)
T 3kom_A 573 KKGIKLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEMAQP-DMWYKYM---------PK--AGGEVKGI-YSFGESA 639 (663)
T ss_dssp HTTCCCEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-GGGGGGC---------CT--TCEEEECC-CSCCCSS
T ss_pred hcCCCeEEEEcCcCCcccccHHHHHHHhcCCCCeEEEEecCCc-ccHHHHh---------cc--cCCcEEEe-cCCcCCC
Confidence 999999999999999999987 55555555 46899999764 4554421 01 23467999 8888764
Q ss_pred --HHHHHHhCCCHHHHHHHHHHHHh
Q 017695 339 --ANLERMAVPQVLCFLYDSSIDGC 361 (367)
Q Consensus 339 --~~l~~~~~l~~~~I~~~~i~~~l 361 (367)
+.|.+++++|++.|+++ +++++
T Consensus 640 ~~~~l~~~~Glt~e~I~~~-~~~~~ 663 (663)
T 3kom_A 640 PAEDLFKRFGFTVENISNI-VAKYV 663 (663)
T ss_dssp CHHHHHHHHTCSHHHHHHH-HTTTC
T ss_pred CHHHHHHHHCcCHHHHHHH-HHhhC
Confidence 57777889999999999 88753
No 19
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=2.2e-49 Score=415.79 Aligned_cols=292 Identities=17% Similarity=0.130 Sum_probs=248.8
Q ss_pred cccccHHHHHHHHHHHHHhhCCcEEEEecCCCCccccccc---chhHHH-HhCCCceeechhhHHHHHHHHHHHhcc-CC
Q 017695 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKI---SKGLLE-KYGPERVLDTPITEAGFTGIGVGAAYY-GL 108 (367)
Q Consensus 34 ~~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~---~~~~~~-~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~ 108 (367)
++++++|++++++|.++++++|+++++++|++.+++++.- +..|.+ +| |+||||+||+|++|+++|+|+|++ |+
T Consensus 349 ~~~~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~GlA~~GG~ 427 (673)
T 1r9j_A 349 SSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNGLDAHDGI 427 (673)
T ss_dssp CSCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeccccccccccccCcccccccccCC-CCCeEecCccHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999877776420 234786 99 999999999999999999999999 59
Q ss_pred eeEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeC-CCCCCC-CCCCch-hHHHHHHhcCCCcEEEeeCCHH
Q 017695 109 KPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAAG-VGAQHS-HCYAAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 109 ~p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~g-~G~tH~-~~~~a~~~~iP~~~V~~P~d~~ 185 (367)
+||+++| ..|+.|+++||++ +|+ +++||+++.+ +|.+.| +|+||+ ..++++++++||++|++|+|++
T Consensus 428 ~P~~~~~-~~F~~~~~~~ir~-~a~--------~~~pvv~~~t~~g~g~G~dG~tHq~~edla~lr~iP~l~V~~Pad~~ 497 (673)
T 1r9j_A 428 IPFGGTF-LNFIGYALGAVRL-AAI--------SHHRVIYVATHDSIGVGEDGPTHQPVELVAALRAMPNLQVIRPSDQT 497 (673)
T ss_dssp EEEEEEE-GGGGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHHSTTCEEECCSSHH
T ss_pred EEEEEeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEECCccCcCCCCcccCCHHHHHHHcCCCCCEEEeCCCHH
Confidence 9999996 6677899999987 666 6899999974 566666 999993 2455999999999999999999
Q ss_pred HHHHHHHHhHcC-CCcEEEeccccccCCCCCccccccCCCc-cccCCcEEEeeeC--CcEEEEEechhHHHHHHHHHHHH
Q 017695 186 DARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIEREG--KDVTITAFSKIVGLSLKAAEILA 261 (367)
Q Consensus 186 e~~~~~~~a~~~-~~Pv~ir~~~~~~~~~~~~~~~~~~~~~-~~~~Gk~~v~~~g--~di~Iia~G~~v~~al~Aa~~L~ 261 (367)
|++.++++|++. ++|++||++|..+ | .++.+.+ .++.| ++++++| .|++||++|++++.|++|+++|+
T Consensus 498 e~~~~l~~a~~~~~~Pv~i~~~r~~~----~---~~~~~~~~~~~~G-a~vl~~g~~~dv~lia~G~~v~~al~Aa~~L~ 569 (673)
T 1r9j_A 498 ETSGAWAVALSSIHTPTVLCLSRQNT----E---PQSGSSIEGVRHG-AYSVVDVPDLQLVIVASGSEVSLAVDAAKALS 569 (673)
T ss_dssp HHHHHHHHHHHCTTCCEEEECCSSEE----C---CCTTCCHHHHHTS-CEEEECCTTCSEEEEECGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCC----C---CCCCcccccccCC-CEEEeeCCCCCEEEEEechhHHHHHHHHHHHH
Confidence 999999999997 8999999887532 1 2223333 46788 6788888 89999999999999999999999
Q ss_pred hcCCceEEEEeeecCCCCHHH---HHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCH
Q 017695 262 KEGISAEVINLRSIRPLDRST---INASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYA 338 (367)
Q Consensus 262 ~~Gi~v~vi~~~~i~P~d~~~---l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~ 338 (367)
++ |+++|||++|++|||++. +.+++++++++|++|++.. +|+++.+ ++. +|+ |.|++++
T Consensus 570 ~~-i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~vv~vE~~~~-~g~~~~v--------------~~~-~g~-d~f~~sg 631 (673)
T 1r9j_A 570 GE-LRVRVVSMPCQELFDAQPDTYRQAVLPAGVPVVSVEAYVS-FGWEKYS--------------HAH-VGM-SGFGASA 631 (673)
T ss_dssp TT-CCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC--------------SEE-ESC-SSCCCSS
T ss_pred hc-CCEEEEeCCCCchhhcccHHHHHHHhccCCeEEEEeCCCc-cchHHhc--------------Cce-EEe-ccCCCCC
Confidence 99 999999999999999985 8889999989999999987 7776522 233 999 8888664
Q ss_pred --HHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 339 --ANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 339 --~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
..|++++++|++.|+++ |+++|++
T Consensus 632 ~~~~L~~~~g~~~~~I~~~-i~~~l~~ 657 (673)
T 1r9j_A 632 PAGVLYKKFGITVEEVVRT-GRELAKR 657 (673)
T ss_dssp CHHHHHHHTTCSHHHHHHH-HHHHHHH
T ss_pred CHHHHHHHHCcCHHHHHHH-HHHHHHH
Confidence 57888899999999999 9999865
No 20
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1.1e-46 Score=403.91 Aligned_cols=310 Identities=18% Similarity=0.191 Sum_probs=256.2
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCC--------------cccccccchhHHHHhCCCceeechhhHHHHHHHH
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGE--------------YQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~--------------~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~A 100 (367)
+.++|..+++.+|.+++++|++|+++++|++. .+|+|..+.+|.++|+|+||+|+||+|++++|+|
T Consensus 589 ~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a 668 (933)
T 2jgd_A 589 KLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFE 668 (933)
T ss_dssp SCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEECSSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhcccccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHH
Confidence 35789999999999999999999999999975 2455556678999999999999999999999999
Q ss_pred HHHhccCCe--eEEecccccHHH---HHHHHHHHHH-hhccccCCCCccccEEEEeCCCCCCCCCCCchh-HHHHHHh--
Q 017695 101 VGAAYYGLK--PVVEFMTFNFSM---QAIDHIINSA-AKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSH-CYAAWYA-- 171 (367)
Q Consensus 101 aGlA~~G~~--p~~~~~~~~f~~---ra~dqi~~~~-a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~-~~~a~~~-- 171 (367)
+|+|++|.+ |+++.+|++|++ |++|||++++ +++. +++|||++.++|. .|.|++||+ .+|+++.
T Consensus 669 ~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~~------~~~~vv~~l~~G~-~g~G~~Hss~~~E~~l~~~ 741 (933)
T 2jgd_A 669 YGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWG------RMCGLVMLLPHGY-EGQGPEHSSARLERYLQLC 741 (933)
T ss_dssp HHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHHC------CCCCCEEEEECCC-SSSCTTSSCCCHHHHHHTC
T ss_pred HHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHHc------cCCCEEEEEeCCC-CCCCcccccchHHHHHHHh
Confidence 999999998 999877788887 9999999988 7642 6889999998764 456888864 4888776
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhH-cC-CCcEEEeccccccCCCCCcc--ccccCCCccccCCcEEEeeeCCcE--EEEE
Q 017695 172 SVPGLKVLSPYSSEDARGLLKAAI-RD-PDPVVFLENELLYGESFPVS--AEVLDSSFCLPIGKAKIEREGKDV--TITA 245 (367)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~~~~a~-~~-~~Pv~ir~~~~~~~~~~~~~--~~~~~~~~~~~~Gk~~v~~~g~di--~Iia 245 (367)
++|||+|++|+|+.|++.++++++ +. ++|++||+||.+++.+..++ .++++..+.+++|++.+++ |+|+ +|++
T Consensus 742 ~~pnm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~~f~~~ig~~~~~~-g~dV~~vI~~ 820 (933)
T 2jgd_A 742 AEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELD-PKGVKRVVMC 820 (933)
T ss_dssp CTTCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHCCCCSEECCCSCCC-GGGCCEEEEE
T ss_pred CCCCeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCCceeecCCcceEee-cCcceEEEEE
Confidence 559999999999999999999985 64 89999999998887543222 1222345667889988877 8899 6777
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC---eEEEEeCCCCCCchHHHHHHHHHHhccCCCC
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN---RLVTVEEGFPQHGVGAEICASVIEESFGYLD 322 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~---~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~ 322 (367)
+|.+...+++|+++|+++ +++|||+++|+|||.+.|.+++++++ +|||+||+...||+|+.|++.+.+.++. .
T Consensus 821 ~G~v~~~l~aa~~~l~~~--~v~VIdl~~l~Pld~e~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~~~~~~--~ 896 (933)
T 2jgd_A 821 SGKVYYDLLEQRRKNNQH--DVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPF--G 896 (933)
T ss_dssp CTTHHHHHHHHHHHTTCC--SEEEEEECEEESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHHHTTSCT--T
T ss_pred chHHHHHHHHHHHHcccC--CeEEEEeeccCCCCHHHHHHHHHhCCCCceEEEEecCCCcCCHHHHHHHHHHHhccc--C
Confidence 777767676777888765 99999999999999999999999998 8999999999999999999999876421 3
Q ss_pred CCeEEEecCCCCCCCHHHHHHHhCCCHHHHHHHHHH
Q 017695 323 APVERIAGADVPMPYAANLERMAVPQVLCFLYDSSI 358 (367)
Q Consensus 323 ~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~~~i~ 358 (367)
.++.++|.+|.+.|... +++.+....+.|+++ +.
T Consensus 897 ~~v~~vg~~d~~~pa~g-~~~~h~~~~~~i~~~-a~ 930 (933)
T 2jgd_A 897 ASLRYAGRPASASPAVG-HMSVHQKQQQDLVND-AL 930 (933)
T ss_dssp CEEEEEEECCCSSSSCS-CHHHHHHHHHHHHHH-HH
T ss_pred CceEEEecCCcCCCCcC-CHHHHHHHHHHHHHH-Hh
Confidence 68999999999998644 233344577788877 54
No 21
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=4.9e-46 Score=396.87 Aligned_cols=303 Identities=18% Similarity=0.196 Sum_probs=244.7
Q ss_pred HHHHHH--HHHHhhCCcEEEEecCCCCc--------------ccccccchhH------HHHhCCCceeechhhHHHHHHH
Q 017695 42 ALNSAL--DEEMSADPKVFLMGEEVGEY--------------QGAYKISKGL------LEKYGPERVLDTPITEAGFTGI 99 (367)
Q Consensus 42 a~~~~L--~~l~~~d~~vv~l~aDl~~~--------------~g~~~~~~~~------~~~~~p~R~i~~GIaE~~~vg~ 99 (367)
+++++| .+++++|++|+++++|++.. +|+|..+.+| .++++|+||+|+||+|++++|+
T Consensus 520 a~~e~la~~~l~~~~~~V~~~G~Dv~~~Tfs~rh~v~~d~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~ 599 (868)
T 2yic_A 520 AFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGF 599 (868)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCcCCccchhhcchhccccCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHH
Confidence 444443 36689999999999999874 6777778888 6756699999999999999999
Q ss_pred HHHHhccC--CeeEEecccccHHHHH---HHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhH-HHHHH--h
Q 017695 100 GVGAAYYG--LKPVVEFMTFNFSMQA---IDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHC-YAAWY--A 171 (367)
Q Consensus 100 AaGlA~~G--~~p~~~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~-~~a~~--~ 171 (367)
|+|+|+.| .+|+++.+|++|+++| +|||+++.. .+| + +++|||++.++|. .|+|++||++ +|+++ +
T Consensus 600 a~G~A~~G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~-~k~--~--~~~~vvi~~p~G~-~G~Gp~Hs~~~~E~~l~l~ 673 (868)
T 2yic_A 600 EYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGE-AKW--G--QLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLW 673 (868)
T ss_dssp HHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHH-HHH--C--CCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHC
T ss_pred HHHHHccCCCCceEEEEehHHHHhhHHHHHHHHHHHHH-HHh--C--CCCCEEEEecCCC-CCCChhhcCCcHHHHHhcC
Confidence 99999999 5678888889999888 999998863 222 2 5899999998766 5799999876 88766 9
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhHcCC--CcEEEeccccccCCCCCcccc--ccCCCccccCCcEEE---eeeCCcE--E
Q 017695 172 SVPGLKVLSPYSSEDARGLLKAAIRDP--DPVVFLENELLYGESFPVSAE--VLDSSFCLPIGKAKI---EREGKDV--T 242 (367)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~~~~a~~~~--~Pv~ir~~~~~~~~~~~~~~~--~~~~~~~~~~Gk~~v---~~~g~di--~ 242 (367)
++|||+|++|+|+.|++.++++++..+ +|+||++||.+|+.+.+.++. ..+..+..++|++.+ +++|+|+ +
T Consensus 674 ~~pnm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~ 753 (868)
T 2yic_A 674 AEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRL 753 (868)
T ss_dssp CTTSCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCCGGGCCEE
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCccccCCCCceecCCcceeecccccCCceeEE
Confidence 999999999999999999999988764 999999999988765433211 112234447898887 7899999 9
Q ss_pred EEEechhHHHHHHHHHHHHhcC-CceEEEEeeecCCCCHHHHHHHHhcCCe---EEEEeCCCCCCchHHHHHHHHHHhcc
Q 017695 243 ITAFSKIVGLSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVRKTNR---LVTVEEGFPQHGVGAEICASVIEESF 318 (367)
Q Consensus 243 Iia~G~~v~~al~Aa~~L~~~G-i~v~vi~~~~i~P~d~~~l~~~~~~~~~---ivvvEe~~~~GGlg~~v~~~l~~~~~ 318 (367)
|||+|.+ ..+++|++ +++| ++++|||+++|+|||.++|.++++++++ ||++||+...||+|++|++.+.+. +
T Consensus 754 Ii~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~e~-~ 829 (868)
T 2yic_A 754 LLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEI-L 829 (868)
T ss_dssp EEECSTH-HHHHHHHH--HHHTCTTEEEEEECEEESCCHHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHHHHHHHHH-C
T ss_pred EEEecHH-HHHHHHHH--HhCCCCCEEEEEeeecCCCCHHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHHHHHHHHH-h
Confidence 9999999 67777666 6679 9999999999999999999999999987 899999999999999999999873 2
Q ss_pred CCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHHH
Q 017695 319 GYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLYD 355 (367)
Q Consensus 319 ~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~~ 355 (367)
..++.|+.++|.+|.+.|+....+.+. ...+.|++.
T Consensus 830 ~~l~~~v~~vg~~d~~~p~~g~~~~h~-~~~~~~~~~ 865 (868)
T 2yic_A 830 PDHFTGLKRISRRAMSAPSSGSSKVHA-VEQQEILDT 865 (868)
T ss_dssp HHHHTTCEEEEECCCSSSSCSCHHHHH-HHHHHHHHH
T ss_pred hhcCCCeEEeccCCcCCCCCCCHHHHH-HHHHHHHHH
Confidence 113468999999999998653333332 234444443
No 22
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.3e-45 Score=398.26 Aligned_cols=283 Identities=18% Similarity=0.210 Sum_probs=238.1
Q ss_pred HHHHHhhCCcEEEEecCCCCc--------------ccccccchhH------HHHhCCCceeechhhHHHHHHHHHHHhcc
Q 017695 47 LDEEMSADPKVFLMGEEVGEY--------------QGAYKISKGL------LEKYGPERVLDTPITEAGFTGIGVGAAYY 106 (367)
Q Consensus 47 L~~l~~~d~~vv~l~aDl~~~--------------~g~~~~~~~~------~~~~~p~R~i~~GIaE~~~vg~AaGlA~~ 106 (367)
..+++++|++|+++++|++.. +|+|..+.+| .++++|+||+|+||+|++++|+|+|+|++
T Consensus 772 ~~~ll~~~~~V~l~GeDv~rgtfs~rh~v~~d~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~ 851 (1113)
T 2xt6_A 772 LGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVG 851 (1113)
T ss_dssp HHHHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcccCCCccchhcchheecccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhc
Confidence 445589999999999999863 5667777889 77566999999999999999999999999
Q ss_pred C--CeeEEecccccHHHHH---HHHHHHHHhhccccCCCCccccEEEEeCCCCCCCCCCCchhH-HHHHH--hcCCCcEE
Q 017695 107 G--LKPVVEFMTFNFSMQA---IDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHC-YAAWY--ASVPGLKV 178 (367)
Q Consensus 107 G--~~p~~~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH~~~-~~a~~--~~iP~~~V 178 (367)
| .+|+++.+|++|+++| +|||++++.. +| + +++|||++.++|. .|+|++||++ +|+++ +++|||+|
T Consensus 852 G~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~~-k~--~--~~~~vv~~lp~G~-~G~G~~Hs~~~~E~~l~l~~~pnm~V 925 (1113)
T 2xt6_A 852 NPDAMVLWEAQFGDFVNGAQSIIDEFISSGEA-KW--G--QLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLWAEGSMTI 925 (1113)
T ss_dssp CTTSEEEEECSSGGGGGGGHHHHHHTTTTHHH-HH--C--CCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHCCTTSCEE
T ss_pred CCCCceEEEEEEHHHHhhhHHHHHHHHHHHHH-Hh--C--CCCCEEEEeCCCC-CCCChhhhcccHHHHHhcCCCCCcEE
Confidence 9 6678898899999887 9999988732 22 2 5899999998766 6799999886 88877 99999999
Q ss_pred EeeCCHHHHHHHHHHhHcCC--CcEEEeccccccCCCCCcccc--ccCCCccccCCcEEE---eeeCCcE--EEEEechh
Q 017695 179 LSPYSSEDARGLLKAAIRDP--DPVVFLENELLYGESFPVSAE--VLDSSFCLPIGKAKI---EREGKDV--TITAFSKI 249 (367)
Q Consensus 179 ~~P~d~~e~~~~~~~a~~~~--~Pv~ir~~~~~~~~~~~~~~~--~~~~~~~~~~Gk~~v---~~~g~di--~Iia~G~~ 249 (367)
++|+|+.|++.+++.++..+ +|++|++||.+|+.+.+++.. ..+..+..++|++.+ +++|+|+ +|||+|.+
T Consensus 926 ~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~iv~~G~~ 1005 (1113)
T 2xt6_A 926 AMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI 1005 (1113)
T ss_dssp ECCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCCSTTCCEEEEECSTH
T ss_pred EecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCcccccCCCCccccCCcceeeccccCccccCEEEEEECHH
Confidence 99999999999999988754 999999999999865433211 111234447898887 7899999 99999998
Q ss_pred HHHHHHHHHHHHhcC-CceEEEEeeecCCCCHHHHHHHHhcCCe---EEEEeCCCCCCchHHHHHHHHHHhccCCCCCCe
Q 017695 250 VGLSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVRKTNR---LVTVEEGFPQHGVGAEICASVIEESFGYLDAPV 325 (367)
Q Consensus 250 v~~al~Aa~~L~~~G-i~v~vi~~~~i~P~d~~~l~~~~~~~~~---ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v 325 (367)
..+++|++ +++| ++++|||+++|+|||.++|.++++++++ +|++||+...||+|++|++.+.+. +..++.|+
T Consensus 1006 -~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~gs~v~~~l~e~-~~~l~~~~ 1081 (1113)
T 2xt6_A 1006 -YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEI-LPDHFTGL 1081 (1113)
T ss_dssp -HHHHHHHH--HHHTCTTEEEEEESEEESCCHHHHHHHHTTCTTCCEEEEEEEEETTSTTHHHHHHHHHHH-SHHHHTTC
T ss_pred -HHHHHHHH--HhCCCCCEEEEEeeeecCCCHHHHHHHHHhCCCCceEEEEecCCCCCCcHHHHHHHHHHH-hhhcCCCe
Confidence 77777776 6679 9999999999999999999999999988 899999999999999999999873 21234689
Q ss_pred EEEecCCCCCCCHH
Q 017695 326 ERIAGADVPMPYAA 339 (367)
Q Consensus 326 ~~ig~~d~~~~~~~ 339 (367)
.++|.+|.+.|+..
T Consensus 1082 ~~vg~~d~~~p~~g 1095 (1113)
T 2xt6_A 1082 KRISRRAMSAPSSG 1095 (1113)
T ss_dssp EEEEECCCSSSSCS
T ss_pred EEEccCCcCCCCCC
Confidence 99999999998653
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=100.00 E-value=8.3e-43 Score=372.74 Aligned_cols=303 Identities=14% Similarity=0.140 Sum_probs=238.5
Q ss_pred cccccHHHHHHHHHHHHHhhC---CcEEEEecCCCC-c--------ccccc-cchhHH-----------HHhCCCceeec
Q 017695 34 VKQMMVREALNSALDEEMSAD---PKVFLMGEEVGE-Y--------QGAYK-ISKGLL-----------EKYGPERVLDT 89 (367)
Q Consensus 34 ~~~~~~r~a~~~~L~~l~~~d---~~vv~l~aDl~~-~--------~g~~~-~~~~~~-----------~~~~p~R~i~~ 89 (367)
++++++|++|+++|.++++++ ++|+++++|++. . .+++. -...|. +.| |+||||+
T Consensus 489 ~~~~atr~afg~~L~~l~~~~~~~~~iV~i~pd~~~~~G~~dl~~S~~i~~~~~~~f~~~d~~~~~~~~e~~-~~R~~d~ 567 (886)
T 2qtc_A 489 SKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE-KGQILQE 567 (886)
T ss_dssp SSCBCHHHHHHHHHHHHTTCTTTTTTEEEEESSCSGGGTCHHHHHHHCBBCC-----------------CBT-TCCBEEC
T ss_pred CCcchHHHHHHHHHHHHHhhcccCCcEEEEcCccccccCcccccccccccccCCcccccccchhhhhhhhcC-CCceeee
Confidence 367899999999999999988 999999999763 2 11110 012343 567 9999999
Q ss_pred hhhHHHH-H---HHHHHHhccC--CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEeCC-CCCC-CCCC
Q 017695 90 PITEAGF-T---GIGVGAAYYG--LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAAA-GVGA 160 (367)
Q Consensus 90 GIaE~~~-v---g~AaGlA~~G--~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~~-g~G~ 160 (367)
||+|++| + ++|+|+|++| ++||+.++ +.| +||++|||++++++ ++.++++.+.. +... ++|+
T Consensus 568 GIaE~~a~~~~~g~a~GlA~~G~~~~P~~~~y-s~F~~qRa~Dqi~~~~d~--------~~~~v~l~~~~~~~~~g~dG~ 638 (886)
T 2qtc_A 568 GINELGAGCSWLAAATSYSTNNLPMIPFYIYY-SMFGFQRIGDLCWAAGDQ--------QARGFLIGGTSGRTTLNGEGL 638 (886)
T ss_dssp CSCHHHHHHHHHHHHTHHHHTSCCCEEEEEEE-GGGSHHHHHHHHHHHHHT--------TCCCEEEEESCSTTTSTTTCT
T ss_pred ccCchhhhhHHHHHHHHHHhcCCCceEEEEEe-hHHHHHHHHHHHHHHHHH--------hcCCEEEEEecCcccCCCCCC
Confidence 9999995 5 6999999999 89998776 556 89999999999986 57888887663 3433 4999
Q ss_pred Cchh-HHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcC-CCc----EEEeccccccCCCCCccccccCCC-ccccCCcEE
Q 017695 161 QHSH-CYAAWYASVPGLKVLSPYSSEDARGLLKAAIRD-PDP----VVFLENELLYGESFPVSAEVLDSS-FCLPIGKAK 233 (367)
Q Consensus 161 tH~~-~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~-~~P----v~ir~~~~~~~~~~~~~~~~~~~~-~~~~~Gk~~ 233 (367)
||++ +++++++++||++|++|+|+.|++.++++|++. ++| +++++++.. .++.. +.++++. ..+ +|+++
T Consensus 639 tHq~~~~~a~lr~iPnl~V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~--~~~~~-p~~~~~~~~~~-~gga~ 714 (886)
T 2qtc_A 639 QHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLN--ENYHM-PAMPEGAEEGI-RKGIY 714 (886)
T ss_dssp TTCCSCHHHHHTTSTTEEEECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCS--CCBCC-CCCCTTCHHHH-HHTCE
T ss_pred ccCCcchHHHHhhCCCCEEEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCc--cccCC-CCCCcchhhhc-cCceE
Confidence 9975 778999999999999999999999999999996 679 999987642 01100 1222222 334 78899
Q ss_pred EeeeC----CcEEEEEechhHHHHHHHHHHHHhc-CCceEEEEeeecCCCCHHHH-------------------HHHHhc
Q 017695 234 IEREG----KDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTI-------------------NASVRK 289 (367)
Q Consensus 234 v~~~g----~di~Iia~G~~v~~al~Aa~~L~~~-Gi~v~vi~~~~i~P~d~~~l-------------------~~~~~~ 289 (367)
++++| .|++||++|+++++|++|+++|+++ ||+++|||++|++|||++.| .+.+..
T Consensus 715 vlr~g~~~~~dVtLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i~~~kt~rl~p~~~~~~~~~e~~l~~ 794 (886)
T 2qtc_A 715 KLETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMND 794 (886)
T ss_dssp EEEEECCSSEEEEEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHHHHHHHHHHCTTSCCCCCHHHHHCCS
T ss_pred EEEecCCCCCCEEEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHHHHhhhcccCccccccHHHHHHhcCC
Confidence 99987 7999999999999999999999999 99999999999999999863 344444
Q ss_pred CCeEEEEeCCCCCCchHHHHHHHHHHhccCCCC-CCeEEEecCCCCCCCH--HHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 290 TNRLVTVEEGFPQHGVGAEICASVIEESFGYLD-APVERIAGADVPMPYA--ANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 290 ~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~-~~v~~ig~~d~~~~~~--~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
+.+|++|++.. |+++.+.++ ++ .++.++|+ |.|+.++ +.|.+++++|++.|+++ ++++|.+
T Consensus 795 -~~vVa~ed~~~--g~~~~~~~~--------~~~~~~~~lG~-D~Fg~sg~~~~L~~~~Gld~e~Iv~~-a~~~L~~ 858 (886)
T 2qtc_A 795 -APAVASTDYMK--LFAEQVRTY--------VPADDYRVLGT-DGFGRSDSRENLRHHFEVDASYVVVA-ALGELAK 858 (886)
T ss_dssp -SCEEEECSSCT--HHHHTTGGG--------CCSSCEEEECC-CSCCCCCCHHHHHHHTTCSHHHHHHH-HHHHHHH
T ss_pred -CCEEEEEeccc--chHHHHHHH--------cCCCCeEEEEe-CCCCCCCCHHHHHHHcCCCHHHHHHH-HHHHHHh
Confidence 56788888765 565544322 34 67889999 7888664 67888999999999999 9998864
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=100.00 E-value=1.6e-39 Score=342.24 Aligned_cols=305 Identities=9% Similarity=0.071 Sum_probs=240.4
Q ss_pred cccHHHHHHHHHHHHHhhCCc-EEEEecCCCCcccccccchhHHHH--------hC--C--------CceeechhhHHHH
Q 017695 36 QMMVREALNSALDEEMSADPK-VFLMGEEVGEYQGAYKISKGLLEK--------YG--P--------ERVLDTPITEAGF 96 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~-vv~l~aDl~~~~g~~~~~~~~~~~--------~~--p--------~R~i~~GIaE~~~ 96 (367)
+...+.+++++|.++++++|+ ++++++|+..|+.+. .|.+. |. | +|||+ ||+||+|
T Consensus 428 ~~~atra~g~~L~~l~~~~p~~~vv~sADl~~Sn~t~----~f~~~t~~~~~~~~~~~P~d~~~~~~GR~i~-GI~Eh~M 502 (845)
T 3ahc_A 428 QVEAPRALGAYCRDIIKNNPDSFRIFGPDETASNRLN----ATYEVTDKQWDNGYLSGLVDEHMAVTGQVTE-QLSEHQC 502 (845)
T ss_dssp EECTHHHHHHHHHHHHHHSTTTEEEEESSCTTTTTCG----GGGGTCCEECCSCCCCTTTCCSEESSCSEEE-CSCHHHH
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEecCCCccccHH----HHHhhcccccccccccCCcccccCCCCcEee-eecHHHH
Confidence 445677889999999999999 999999998777653 33333 22 4 89999 9999999
Q ss_pred HHHHHHHhccCCeeEEecccccHH--HHHHHH----HHHHHhhccccCCCCccc-cEEEEeC-CCCCCC-CCCCchhH--
Q 017695 97 TGIGVGAAYYGLKPVVEFMTFNFS--MQAIDH----IINSAAKSNYMSSGQISV-PIVFRGP-NGAAAG-VGAQHSHC-- 165 (367)
Q Consensus 97 vg~AaGlA~~G~~p~~~~~~~~f~--~ra~dq----i~~~~a~~~~~~~~~~~~-pvv~~~~-~G~~~g-~G~tH~~~-- 165 (367)
+++++|+|++|.+||+++|.+|+. .|+++| ||++++.+.|+. +. ++.++.+ +|...| +|+|| |+
T Consensus 503 ~gia~Glal~G~~~f~~t~atFl~~~~~a~~q~akwiR~a~a~~~wr~----~~~~v~~v~Th~si~~GeDGpTH-Q~~e 577 (845)
T 3ahc_A 503 EGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRK----PISSVNLLVSSHVWRQDHNGFSH-QDPG 577 (845)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHCTTSC----CCBCEEEEEESCGGGCTTTCGGG-CCCT
T ss_pred HHHHHHHHhcCCCCceecchhhhchhhhHHHHHHHHHHhhHHhhhhcc----cCCceEEEEeCCceeecCCCCCC-CCcH
Confidence 999999999999999999765544 899999 999855543332 34 4666654 577777 99999 55
Q ss_pred HH--HHHh---cCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEec-cccccCCCCCccccccCCCc---cccCCcEEEe-
Q 017695 166 YA--AWYA---SVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE-NELLYGESFPVSAEVLDSSF---CLPIGKAKIE- 235 (367)
Q Consensus 166 ~~--a~~~---~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir~-~~~~~~~~~~~~~~~~~~~~---~~~~Gk~~v~- 235 (367)
++ ..++ .+||++|+.|+|+.|+..+++.|++.++|++++. +|. +. +.+++.+. .+..|++.+.
T Consensus 578 ~~d~l~~~r~~~iPn~~V~~PaDanet~~a~~~al~~~~~~~v~v~sRq----~~---p~~~~~~~a~~~~~~G~~v~~~ 650 (845)
T 3ahc_A 578 VTSLLINKTFNNDHVTNIYFATDANMLLAISEKCFKSTNKINAIFAGKQ----PA---PTWVTLDEARAELEAGAAEWKW 650 (845)
T ss_dssp HHHHHGGGCCTTCCCEEEEECCSHHHHHHHHHHHHHCBSCEEEEECCCS----CE---EECSCHHHHHHHHHHSEEECTT
T ss_pred HHHHHHHhhccCCCCeEEEeCCCHHHHHHHHHHHHHcCCCeEEEEecCC----CC---CccCCchhhhhhhcCCeEEEEe
Confidence 44 3333 7899999999999999999999999988887765 553 22 22333232 3567888777
Q ss_pred --ee--C--CcEEEEEechh-HHHHHHHHHHHHhcCCceEEEEeeec---CCCCHHHHHHHHhcCCeEEEEeCCCC--CC
Q 017695 236 --RE--G--KDVTITAFSKI-VGLSLKAAEILAKEGISAEVINLRSI---RPLDRSTINASVRKTNRLVTVEEGFP--QH 303 (367)
Q Consensus 236 --~~--g--~di~Iia~G~~-v~~al~Aa~~L~~~Gi~v~vi~~~~i---~P~d~~~l~~~~~~~~~ivvvEe~~~--~G 303 (367)
++ | .|++||++|+. +.+|++|+++|+++||+++|||+++| +|.|++.+....++++.|+++|+|.+ .|
T Consensus 651 as~d~~g~~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~g 730 (845)
T 3ahc_A 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYH 730 (845)
T ss_dssp TCCCSSTTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEES
T ss_pred ecccccCCCCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeec
Confidence 45 5 89999999965 56699999999999999999999999 77776654445556778999999987 69
Q ss_pred chHHHHHHHHHHhccCCCCCCeEEEecCCCCCCC--HHHHHHHhCCCHHHHHHHHHHHHhh
Q 017695 304 GVGAEICASVIEESFGYLDAPVERIAGADVPMPY--AANLERMAVPQVLCFLYDSSIDGCY 362 (367)
Q Consensus 304 Glg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~--~~~l~~~~~l~~~~I~~~~i~~~l~ 362 (367)
|+++.|++.+.++. ...++.++|.+| ++.. ...|..++++|.++|+++ +++++.
T Consensus 731 GlgsaV~ell~~r~---~~~~l~v~G~~d-~G~tgtp~eLl~~~gld~~~Iv~~-a~~~l~ 786 (845)
T 3ahc_A 731 SYAQDVRGLIYDRP---NHDNFHVVGYKE-QGSTTTPFDMVRVNDMDRYALQAA-ALKLID 786 (845)
T ss_dssp SCHHHHHHHTTTST---TGGGEEEECCCS-CCCSCCHHHHHHTTTCSHHHHHHH-HHHHHH
T ss_pred CcHHHHHHHHHhCC---CCceEEEEeccC-CCCCCCHHHHHHHhCcCHHHHHHH-HHHHcc
Confidence 99999999998762 135799999999 6543 456777889999999999 988774
No 25
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.96 E-value=7.1e-30 Score=252.63 Aligned_cols=288 Identities=18% Similarity=0.157 Sum_probs=103.2
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHH---HhCCCceeechhhHHHHHHHHHHHhccCCeeEE
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLE---KYGPERVLDTPITEAGFTGIGVGAAYYGLKPVV 112 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~---~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p~~ 112 (367)
.++..+|+.+++.. .+.+++..-+- ..++. +...|.+ ++ .-+|+++. +|++++++|.|+|++|.||++
T Consensus 22 ~~~GneAva~~~~~---ag~~~v~~yPg-tP~t~---i~~~l~~~~~~~-g~~~i~~e-~E~~a~~~a~Gaa~aG~r~~~ 92 (395)
T 1yd7_A 22 FIQGDEAIARAAIL---AGCRFYAGYPI-TPASE---IFEAMALYMPLV-DGVVIQME-DEIASIAAAIGASWAGAKAMT 92 (395)
T ss_dssp EEEHHHHHHHHHHH---HTCCEEEECCB-TTTBC---HHHHHHHHGGGG-TCEEEECS-CHHHHHHHHHHHHHTTCCEEE
T ss_pred EeEHHHHHHHHHHH---cCCCEEEEEEC-cchHH---HHHHHHHhhhhc-CcEEEEeC-CHHHHHHHHHHHHHhCCcEEE
Confidence 47889999998865 45667776551 12222 2234444 45 46899986 999999999999999999999
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCC--CCCCCCC--CchhHHHHHHhcCC--CcEEEeeCCHHH
Q 017695 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG--AAAGVGA--QHSHCYAAWYASVP--GLKVLSPYSSED 186 (367)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G--~~~g~G~--tH~~~~~a~~~~iP--~~~V~~P~d~~e 186 (367)
++++++ +.+++|||.+. + ..++|+|++...+ ...|.+. .|++...+++.+.| ++.++.|+|++|
T Consensus 93 ~ts~~G-~~~~~d~l~~a-a--------~~~~P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~~g~~g~~vl~p~~~qe 162 (395)
T 1yd7_A 93 ATSGPG-FSLMQENIGYA-V--------MTETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQE 162 (395)
T ss_dssp EEETTH-HHHHTTTCC-------------CCCCEEEEEEC--------------------------CCCCEEECCCSHHH
T ss_pred EeCchH-HHHHHHHHHHH-H--------hcCCCEEEEEeeCCCCCCCCCcccchhHHHHHHhccCCCcceEEEeCCCHHH
Confidence 998555 45699998763 3 2689999987643 3223222 23334456777755 999999999999
Q ss_pred HHHHHHHhH----cCCCcEEEeccccccCCCC----Cccccc----------cC---CCccc--cC--------Cc----
Q 017695 187 ARGLLKAAI----RDPDPVVFLENELLYGESF----PVSAEV----------LD---SSFCL--PI--------GK---- 231 (367)
Q Consensus 187 ~~~~~~~a~----~~~~Pv~ir~~~~~~~~~~----~~~~~~----------~~---~~~~~--~~--------Gk---- 231 (367)
+++++.+|+ +.+.||++++++.+++... |....+ ++ .+|.. +. |.
T Consensus 163 a~~l~~~A~~lA~~~~~PVi~~~~~~l~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~ 242 (395)
T 1yd7_A 163 AFDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRKLPRNEEEAKLPFGDPHGDGVPPMPIFGKGYRT 242 (395)
T ss_dssp HHHHHHHHHHHHHHHTSEEEEEECHHHHHCEEEEEECCGGGSCCCCCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHCCCEEEEcchhHhCeeceecCCChHHhhhhcccccCCCcccccCcccCCCCCCCCCccCCCCcee
Confidence 999999998 4679999998754332210 000000 00 01111 00 00
Q ss_pred -----------------------------------------E-EEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEE
Q 017695 232 -----------------------------------------A-KIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEV 269 (367)
Q Consensus 232 -----------------------------------------~-~v~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~v 269 (367)
. .+.++|+|++||++|+++..+++|++.|+++|++++|
T Consensus 243 ~~~~~~h~e~g~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~g~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~v 322 (395)
T 1yd7_A 243 YVTGLTHDEKGRPRTVDREVHERLIKRIVEKIEKNKKDIFTYETYELEDAEIGVVATGIVARSALRAVKMLREEGIKAGL 322 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecccccccccCcccCCHHHHHHHHHHHHHHHHHHHhhcCccEEecCCCCCEEEEEECccHHHHHHHHHHHHHcCCceEE
Confidence 0 1124678999999999999999999999999999999
Q ss_pred EEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCH
Q 017695 270 INLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQV 349 (367)
Q Consensus 270 i~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~ 349 (367)
|+++++||||.+.|.++++++++|+|+||+. |||+++|++.+.+. .++.++|..+ ...+++
T Consensus 323 i~~r~~~Pld~~~i~~~~~~~~~vvvvEe~~--G~l~~~v~~~~~~~------~~~~~~gk~~-----------g~~~~~ 383 (395)
T 1yd7_A 323 LKIETIWPFDFELIERIAERVDKLYVPEMNL--GQLYHLIKEGANGK------AEVKLISKIG-----------GEVHTP 383 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeCeecCCCHHHHHHHHhcCCEEEEEeCCc--hHHHHHHHHHhcCC------CCeEEEeccC-----------CCcCCH
Confidence 9999999999999999999999999999996 99999999887531 2344555543 124688
Q ss_pred HHHHHHHHHHHhh
Q 017695 350 LCFLYDSSIDGCY 362 (367)
Q Consensus 350 ~~I~~~~i~~~l~ 362 (367)
++|.++ ++++++
T Consensus 384 ~ei~~~-i~~~~~ 395 (395)
T 1yd7_A 384 MEIFEF-IRREFK 395 (395)
T ss_dssp -------------
T ss_pred HHHHHH-HHHhhC
Confidence 999988 887653
No 26
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.86 E-value=7.3e-20 Score=202.22 Aligned_cols=296 Identities=13% Similarity=0.073 Sum_probs=195.1
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHH-----HhCCCceeechhhHHHHHHHHHHHhccCCee
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLE-----KYGPERVLDTPITEAGFTGIGVGAAYYGLKP 110 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~-----~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p 110 (367)
.++..+|++... ....+++..-+ +..++...-....+.. .||+.+.+...++|.++++++.|+|.+|.|+
T Consensus 6 ~~~GNeAvA~~a----~ag~~~~~~YP-ITPstei~e~l~~~~~~g~~~~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~ 80 (1231)
T 2c42_A 6 TTDGNTATAHVA----YAMSEVAAIYP-ITPSSTMGEEADDWAAQGRKNIFGQTLTIREMQSEAGAAGAVHGALAAGALT 80 (1231)
T ss_dssp EEEHHHHHHHHH----HHHCSEEEECC-CTTTHHHHHHHHHHHHHTCCCTTSCCCEEEECSSHHHHHHHHHHHHHTTCCE
T ss_pred EccHHHHHHHHH----HHCCCEEEEEC-CCCchHHHHHHHHHHHcCCchhcCCceEEEecCChHHHHHHHHHHHHcCChH
Confidence 356778888764 23467777654 2223222100111122 3655679999999999999999999999999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCC--CCCCC--CCCCchhHHHHHHhcCCCcEEEeeCCHHH
Q 017695 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN--GAAAG--VGAQHSHCYAAWYASVPGLKVLSPYSSED 186 (367)
Q Consensus 111 ~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~--G~~~g--~G~tH~~~~~a~~~~iP~~~V~~P~d~~e 186 (367)
+++|..+ .+..+.|.+.. ++. ..+|+|++... |++.| ..+.|+ +.+....+|+.|++|+|+||
T Consensus 81 ~t~Ts~~-Gl~lm~e~l~~-~ag--------~~~P~Vi~va~R~g~~~glsi~~~hs---d~~~ar~~G~~vl~pss~QE 147 (1231)
T 2c42_A 81 TTFTASQ-GLLLMIPNMYK-ISG--------ELLPGVFHVTARAIAAHALSIFGDHQ---DIYAARQTGFAMLASSSVQE 147 (1231)
T ss_dssp EEEECHH-HHHHHHHHHHH-HHH--------TTCCCEEEEEECCCCSSSBCCSCCSH---HHHTTTTSSCEEEECCSHHH
T ss_pred hhhccHH-HHHHHHHHHHH-HhC--------CCCCEEEEECCCCccCCCCcCCCchh---hHHHHhcCCcEEEECCCHHH
Confidence 9998744 44555677643 332 47899998763 44433 233453 34567889999999999999
Q ss_pred HHHHHHHhH----cCCCcEEEeccccccCCC---CCccc-c-----------------ccCCCccccCCc----------
Q 017695 187 ARGLLKAAI----RDPDPVVFLENELLYGES---FPVSA-E-----------------VLDSSFCLPIGK---------- 231 (367)
Q Consensus 187 ~~~~~~~a~----~~~~Pv~ir~~~~~~~~~---~~~~~-~-----------------~~~~~~~~~~Gk---------- 231 (367)
+++++..|+ +++.||+++.+..++.+. ..+.+ + ..+.+..++.|.
T Consensus 148 a~dl~~~Af~lAek~~~PVi~~~Dg~~~sh~~~~vev~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~g~a~~~~~~~~~ 227 (1231)
T 2c42_A 148 AHDMALVAHLAAIESNVPFMHFFDGFRTSHEIQKIEVLDYADMASLVNQKALAEFRAKSMNPEHPHVRGTAQNPDIYFQG 227 (1231)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETTTTTTCEEEEECCCHHHHHHTSCHHHHHHHHHHSCCTTSCCEESCBCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCcccccceeeeecCCHHHHHhhcChhhhhhccccccCCCCceecCCCcCcchhhhh
Confidence 999999885 468999999876433221 00000 0 000000011111
Q ss_pred --------------------------------EEE-eeeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCC
Q 017695 232 --------------------------------AKI-EREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL 278 (367)
Q Consensus 232 --------------------------------~~v-~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~ 278 (367)
.+. -.+++|++||++|+++..+++|++.|+++|++|+||++++++||
T Consensus 228 ~e~~~~~~~~~~~~v~~~~~k~~~~~g~~y~~~e~~g~~dAd~vIVa~Gs~~~~~~eAv~~L~~~G~kvgvl~lr~~rPf 307 (1231)
T 2c42_A 228 REAANPYYLKVPGIVAEYMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLYRPF 307 (1231)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHSCCCCSEEEEECTTCSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEESEEESC
T ss_pred HhhhhhhhHhhHHHHHHHHHHHHHHhcccccceeeecCCCCCEEEEEeCHHHHHHHHHHHHHHhcCCceEEEEEEEeCCC
Confidence 121 24679999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-hcCCeEEEEeCCCCCC----chHHHHHHHHHHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHH
Q 017695 279 DRSTINASV-RKTNRLVTVEEGFPQH----GVGAEICASVIEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFL 353 (367)
Q Consensus 279 d~~~l~~~~-~~~~~ivvvEe~~~~G----Glg~~v~~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~ 353 (367)
|.+.|.+++ +++++|+|+|+....| -|..+|...+.... ...++...|.-. .+. ..++++.|.
T Consensus 308 p~~~i~~~l~~~~k~i~VvE~~~~~g~~G~pl~~dv~~al~~~~---~~~~~~~~gr~g----l~g-----~~~tp~~i~ 375 (1231)
T 2c42_A 308 VSEAFFAALPASAKVITVLDRTKEPGAPGDPLYLDVCSAFVERG---EAMPKILAGRYG----LGS-----KEFSPAMVK 375 (1231)
T ss_dssp CHHHHHHTSCTTCCEEEEEESSCCTTCSSCHHHHHHHHHHHHHC---SCCCEEEEEECC----GGG-----CCCCHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEECCCCCCCCcccHHHHHHHHHhhcc---CCCCeEEEEEEC----CCC-----CCCCHHHHH
Confidence 999999988 6779999999984332 24556666665421 111343333321 100 136888888
Q ss_pred HHHHHHHhh
Q 017695 354 YDSSIDGCY 362 (367)
Q Consensus 354 ~~~i~~~l~ 362 (367)
+. ++++..
T Consensus 376 ~~-~~~l~~ 383 (1231)
T 2c42_A 376 SV-YDNMSG 383 (1231)
T ss_dssp HH-HHHHHT
T ss_pred HH-HHHhhc
Confidence 88 877653
No 27
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=99.72 E-value=2e-17 Score=136.40 Aligned_cols=107 Identities=20% Similarity=0.225 Sum_probs=87.6
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHh
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEE 316 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~ 316 (367)
+|+|++||+||+++..|++|++.|+++|++++|+++++++|||.+.|.++++++++|+|+|++. .|||++.|...+.
T Consensus 12 ~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~-~G~l~~~i~~~~~-- 88 (118)
T 3ju3_A 12 KEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNY-TAQAAQMIKLYTG-- 88 (118)
T ss_dssp SSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCC-CCCHHHHHHHHHC--
T ss_pred CCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCC-CCcHHHHHHHHcC--
Confidence 6789999999999999999999999999999999999999999999999999999999999975 6999999876541
Q ss_pred ccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 317 SFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 317 ~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
. .++..+.. ++. ..+++++|.+. +++++++
T Consensus 89 ----~-~~~~~i~~------~~G-----~~~~~~ei~~~-i~~~~~~ 118 (118)
T 3ju3_A 89 ----I-DIKNKILK------YNG-----RHMTEDEILKS-AKEILNK 118 (118)
T ss_dssp ----C-CCCCCCCC------BTT-----BCCCHHHHHHH-HHHHHHC
T ss_pred ----C-CceeEEee------eCC-----eeCCHHHHHHH-HHHHhhC
Confidence 1 11111111 111 13799999999 9998753
No 28
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=94.15 E-value=0.29 Score=50.06 Aligned_cols=149 Identities=13% Similarity=0.023 Sum_probs=90.0
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhC----CCceeechhhHHHHHHHHHHHhccCCeeE
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYG----PERVLDTPITEAGFTGIGVGAAYYGLKPV 111 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~----p~R~i~~GIaE~~~vg~AaGlA~~G~~p~ 111 (367)
+++..+++.+.|.+ ..=+.++..+ + +. ...|.+.+. .=|++-+ ..|++++.+|.|.|+...+|-
T Consensus 3 ~~~~a~~lv~~L~~---~GV~~vfg~P--G----~~--~~~l~~al~~~~~~i~~i~~-~~E~~Aa~~A~GyAr~tgk~~ 70 (590)
T 1v5e_A 3 KINIGLAVMKILES---WGADTIYGIP--S----GT--LSSLMDAMGEEENNVKFLQV-KHEEVGAMAAVMQSKFGGNLG 70 (590)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEECC--C----TT--THHHHTTSSSTTCCCEEEEC-SSHHHHHHHHHHHHHTTCCCC
T ss_pred CccHHHHHHHHHHH---cCCCEEEEec--C----Cc--hHHHHHHHHhcCCCCeEEee-CCHHHHHHHHHHHHHHHCCCE
Confidence 35667777777765 3444555443 2 11 124444431 1256655 799999999999999965553
Q ss_pred --EecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHH-HHHHhcCCCcEEEeeCCHHH
Q 017695 112 --VEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCY-AAWYASVPGLKVLSPYSSED 186 (367)
Q Consensus 112 --~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~-~a~~~~iP~~~V~~P~d~~e 186 (367)
+.|+.+ .+.-++.-|.+ + +. .++|++++..+-+. .|.+..+ ..+ ..+++.+..+ .+.+.++++
T Consensus 71 v~~~tsGp-G~~N~~~gl~~-A-~~-------~~vPll~Itg~~p~~~~g~~~~Q-~~d~~~~~~~~tk~-~~~v~~~~~ 138 (590)
T 1v5e_A 71 VTVGSGGP-GASHLINGLYD-A-AM-------DNIPVVAILGSRPQRELNMDAFQ-ELNQNPMYDHIAVY-NRRVAYAEQ 138 (590)
T ss_dssp EEEECTTH-HHHTTHHHHHH-H-HH-------HTCCEEEEEEECCGGGTTTTCTT-CCCCHHHHHTTCSE-EEECCSGGG
T ss_pred EEEeCcCh-HHHHHHHHHHH-H-Hh-------cCCCEEEEcCCCCcccCCCCccc-ccCHHHHHHhhccE-EEEeCCHHH
Confidence 334433 33344555543 2 21 58999998643222 2323222 222 4799998766 677788888
Q ss_pred HHHHHHHhHc----C-CCcEEEeccccc
Q 017695 187 ARGLLKAAIR----D-PDPVVFLENELL 209 (367)
Q Consensus 187 ~~~~~~~a~~----~-~~Pv~ir~~~~~ 209 (367)
+...++.|++ . ++||+| .+...
T Consensus 139 ~~~~i~~A~~~A~~~~~GPV~l-iP~dv 165 (590)
T 1v5e_A 139 LPKLVDEAARMAIAKRGVAVLE-VPGDF 165 (590)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEE-EETTG
T ss_pred HHHHHHHHHHHHhcCCCceEEE-Eccch
Confidence 8888877765 3 489999 88654
No 29
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=93.26 E-value=0.5 Score=47.99 Aligned_cols=151 Identities=15% Similarity=0.104 Sum_probs=84.4
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEec
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVEF 114 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~~ 114 (367)
++..+++.+.|.+. +=+.++..+ +.. ...+.+.+.+ ..=|++.+ ..|++++.+|.|.|+...+| ++.|
T Consensus 11 ~~~a~~l~~~L~~~---GV~~vfg~P--G~~--~~~l~~al~~--~~i~~v~~-~~E~~Aa~~A~Gyar~tg~p~v~~~T 80 (566)
T 1ozh_A 11 AHGADLVVSQLEAQ---GVRQVFGIP--GAK--IDKVFDSLLD--SSIRIIPV-RHEANAAFMAAAVGRITGKAGVALVT 80 (566)
T ss_dssp SCHHHHHHHHHHHH---TCCEEEEEC--CTT--THHHHHHGGG--SSSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred CcHHHHHHHHHHHC---CCCEEEEcC--CCc--hHHHHHHHHh--CCCcEEEe-CCHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 56677777777653 334444433 211 1122233322 12367776 79999999999999974343 3445
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCC--CCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~ 192 (367)
+.+. +.-++.-|.+ + +. .++||+++..+-+.. +.+..|......+++.+.-+ .+...+++++...++
T Consensus 81 sGpG-~~N~~~~l~~-A-~~-------~~vPll~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~ 149 (566)
T 1ozh_A 81 SGPG-CSNLITGMAT-A-NS-------EGDPVVALGGAVKRADKAKQVHQSMDTVAMFSPVTKY-AIEVTAPDALAEVVS 149 (566)
T ss_dssp STHH-HHTTHHHHHH-H-HH-------HTCCEEEEEEECCTTTC------CCCHHHHHGGGCSE-EEECCSGGGHHHHHH
T ss_pred cChH-HHHHHHHHHH-H-Hh-------cCCCEEEEeCCCccccCCCCcccccCHHHHHHHHhhe-EEEcCCHHHHHHHHH
Confidence 5443 3334444433 2 21 589999986432222 22322211224899988766 445566777766666
Q ss_pred HhHc----C-CCcEEEecccc
Q 017695 193 AAIR----D-PDPVVFLENEL 208 (367)
Q Consensus 193 ~a~~----~-~~Pv~ir~~~~ 208 (367)
.|++ . ++||+|-.+..
T Consensus 150 ~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 150 NAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp HHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHhcCCCCeEEEEeChh
Confidence 6554 3 59999976654
No 30
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=93.19 E-value=0.8 Score=46.34 Aligned_cols=151 Identities=20% Similarity=0.087 Sum_probs=88.8
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEe
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~ 113 (367)
+++..+++.+.|.+. +=+.++..+ +.. ...+.+.+.+ . +=|++.+ ..|++++.+|.|.|+...+| ++.
T Consensus 3 ~~~~a~~l~~~L~~~---GV~~vfg~P--G~~--~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~ 72 (563)
T 2uz1_A 3 MITGGELVVRTLIKA---GVEHLFGLH--GAH--IDTIFQACLD-H-DVPIIDT-RHEAAAGHAAEGYARAGAKLGVALV 72 (563)
T ss_dssp EEEHHHHHHHHHHHH---TCCCEEECC--CGG--GHHHHHHHHH-H-TCCEEEC-SSHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred ccCHHHHHHHHHHHC---CCCEEEECC--CCc--hHHHHHHHHh-c-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 356777777777654 333333332 211 1123333433 2 3578877 79999999999999984333 334
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchh-HH-HHHHhcCCCcEEEeeCCHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSH-CY-AAWYASVPGLKVLSPYSSEDARG 189 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~-~~-~a~~~~iP~~~V~~P~d~~e~~~ 189 (367)
|+.+ .+.-++.-|.+ + +. .++||+++..+-+. .+.|..+ . .+ ..+++.+.-+ .+...+++++..
T Consensus 73 TsGp-G~~N~~~~l~~-A-~~-------~~~Pll~itg~~~~~~~~~~~~Q-~~~d~~~~~~~~tk~-~~~v~~~~~~~~ 140 (563)
T 2uz1_A 73 TAGG-GFTNAVTPIAN-A-WL-------DRTPVLFLTGSGALRDDETNTLQ-AGIDQVAMAAPITKW-AHRVMATEHIPR 140 (563)
T ss_dssp CTTH-HHHTTHHHHHH-H-HH-------HTCCEEEEEEECCGGGTTSCCTT-CCCCHHHHHGGGCSE-EEECCCGGGHHH
T ss_pred ccCc-cHHHHHHHHHH-H-Hh-------cCCCEEEEeCCCCcccCCchhhh-hhccHHHHhhhhhce-EEEcCCHHHHHH
Confidence 5433 33334455443 2 21 58999998643222 2333333 2 23 4899988765 455567777777
Q ss_pred HHHHhHc----C-CCcEEEecccc
Q 017695 190 LLKAAIR----D-PDPVVFLENEL 208 (367)
Q Consensus 190 ~~~~a~~----~-~~Pv~ir~~~~ 208 (367)
.++.|++ . ++||+|-.+..
T Consensus 141 ~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 141 LVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHHHHhcCCCCceEEEEeCHH
Confidence 7776664 2 59999976654
No 31
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=93.12 E-value=0.96 Score=45.65 Aligned_cols=152 Identities=14% Similarity=0.052 Sum_probs=85.1
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEEec
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVVEF 114 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~-p~~~~ 114 (367)
++..+++.+.|.+ ..=+-++..+ +.. ...+.+.+.+ .+.=|++.+ ..|+++.-+|-|.|+. |.. .+++|
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~dal~~-~~~i~~i~~-~~E~~Aa~~A~GyAr~tg~~~v~~~T 73 (549)
T 3eya_A 3 QTVAAYIAKTLES---AGVKRIWGVT--GDS--LNGLSDSLNR-MGTIEWMST-RHEEVAAFAAGAEAQLSGELAVCAGS 73 (549)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECC--CGG--GHHHHHHHHH-HCSSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred ccHHHHHHHHHHH---CCCCEEEEcC--CCc--hHHHHHHHHh-cCCCeEEEe-CChHHHHHHHHHHHHHhCCCEEEEeC
Confidence 4566666666654 3334444433 211 1123334433 312367776 7999999999999997 533 33445
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~ 192 (367)
+.+.. .-++.-|.+ + +. .++||+++..+-+. .|.|..|......+++.+..+. ....+++++...++
T Consensus 74 sGpG~-~N~~~gi~~-A-~~-------~~vPvl~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~~-~~v~~~~~~~~~i~ 142 (549)
T 3eya_A 74 CGPGN-LHLINGLFD-C-HR-------NHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHYC-ELVSSPEQIPQVLA 142 (549)
T ss_dssp TTHHH-HTTHHHHHH-H-HH-------TTCCEEEEEEESCGGGTTSCCTTCCCHHHHTSTTCSEE-EECCSGGGHHHHHH
T ss_pred CCCcH-hhhHHHHHH-H-Hh-------hCCCEEEEeCCCchhhcCCCCCCccCHHHHHhhhhheE-EEeCCHHHHHHHHH
Confidence 54433 334444433 2 21 68999998643222 2333333222347888887654 44456666666655
Q ss_pred HhH----cCCCcEEEecccc
Q 017695 193 AAI----RDPDPVVFLENEL 208 (367)
Q Consensus 193 ~a~----~~~~Pv~ir~~~~ 208 (367)
.|+ ..++||+|-.+..
T Consensus 143 ~A~~~A~~~~GPV~l~iP~d 162 (549)
T 3eya_A 143 IAMRKAVLNRGVSVVVLPGD 162 (549)
T ss_dssp HHHHHHHHTTSEEEEEEEHH
T ss_pred HHHHHHhhCCCCEEEEeChh
Confidence 554 4589999976643
No 32
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=92.94 E-value=0.63 Score=47.44 Aligned_cols=152 Identities=17% Similarity=0.078 Sum_probs=88.8
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEEec
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVVEF 114 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~-p~~~~ 114 (367)
++..+++.+.|.+ .+=+.++..+ +.. ...+.+.+.+ .+.=|++.+ ..|++++.+|.|.|+. |.. .++.|
T Consensus 12 ~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~-~~~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~T 82 (590)
T 1ybh_A 12 RKGADILVEALER---QGVETVFAYP--GGA--SMEIHQALTR-SSSIRNVLP-RHEQGGVFAAEGYARSSGKPGICIAT 82 (590)
T ss_dssp EEHHHHHHHHHHT---TTCCEEEECC--CGG--GHHHHHHHHH-CSSCEECCC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred ccHHHHHHHHHHH---cCCCEEEEcC--CCc--hHHHHHHHhc-cCCccEEee-CCHHHHHHHHHHHHHHHCCCEEEEec
Confidence 5667777666654 3344444433 211 1122233332 212366666 7999999999999998 533 23445
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~ 192 (367)
+.+. ..-++.-|.+ + +. .++||+++..+-+. .|.|..+......+++.+-.+ .+...+++++..+++
T Consensus 83 sGpG-~~N~~~gv~~-A-~~-------~~vPll~itg~~~~~~~g~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~i~~~l~ 151 (590)
T 1ybh_A 83 SGPG-ATNLVSGLAD-A-LL-------DSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKH-NYLVMDVEDIPRIIE 151 (590)
T ss_dssp TTHH-HHTTHHHHHH-H-HH-------HTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSE-EEECCCGGGHHHHHH
T ss_pred cCch-HHHHHHHHHH-H-Hh-------hCCCEEEEeCcCCccccCCCcccccCHHHHHHHHhCe-EEecCCHHHHHHHHH
Confidence 5443 3334444433 2 21 58999998643222 233333322234899988776 555677888888888
Q ss_pred HhHc-----CCCcEEEecccc
Q 017695 193 AAIR-----DPDPVVFLENEL 208 (367)
Q Consensus 193 ~a~~-----~~~Pv~ir~~~~ 208 (367)
.|++ .++||+|-.+..
T Consensus 152 ~A~~~a~~~~~GPV~l~iP~d 172 (590)
T 1ybh_A 152 EAFFLATSGRPGPVLVDVPKD 172 (590)
T ss_dssp HHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHhhCCCceEEEEeCcc
Confidence 8875 258999976643
No 33
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=92.47 E-value=0.5 Score=48.02 Aligned_cols=152 Identities=13% Similarity=-0.016 Sum_probs=88.6
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEe
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~ 113 (367)
+++..+++.+.|.+. .=+-++..+ +... ...+.+.+. + =|++.+ ..|+++.-+|.|.|+...+| ++.
T Consensus 11 ~~~~a~~l~~~L~~~---GV~~vfg~P--G~~~-~~~l~~al~---~-i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~ 79 (573)
T 2iht_A 11 KPTAAHALLSRLRDH---GVGKVFGVV--GREA-ASILFDEVE---G-IDFVLT-RHEFTAGVAADVLARITGRPQACWA 79 (573)
T ss_dssp CCCHHHHHHHHHHHT---TCCEEEECC--CGGG-GTCCSCSST---T-CEEEEC-SSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CccHHHHHHHHHHHC---CCCEEEEec--CCcc-hhHHHHHHc---C-CeEEee-CCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 357777777777653 334444433 2110 112223333 2 466666 79999999999999985554 344
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCC-CCCchhHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGV-GAQHSHCYAAWYASVPGLKVLSPYSSEDARGL 190 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~-G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (367)
|+.+ ...-++.-|.+.. + .++|++++..+-+. .+. +..|......+++.+.-+. +...+++++...
T Consensus 80 TsGp-G~~N~~~~v~~A~-~--------~~~Pll~itg~~~~~~~~~~~~~Q~~d~~~~~~~~~k~~-~~v~~~~~~~~~ 148 (573)
T 2iht_A 80 TLGP-GMTNLSTGIATSV-L--------DRSPVIALAAQSESHDIFPNDTHQCLDSVAIVAPMSKYA-VELQRPHEITDL 148 (573)
T ss_dssp CTTH-HHHHHHHHHHHHH-H--------HTCCEEEEEEESCGGGCCTTTSTTCCCHHHHHGGGSSEE-EECCSGGGHHHH
T ss_pred ccCc-hHHHHHHHHHHHH-h--------hCCCEEEEcccCcccccCCcCccccCCHHHHHHhHhhEE-EEcCCHHHHHHH
Confidence 5544 3444455554322 2 58999998643222 233 3333222348999887664 455667667766
Q ss_pred HHHhHc----C-CCcEEEeccccc
Q 017695 191 LKAAIR----D-PDPVVFLENELL 209 (367)
Q Consensus 191 ~~~a~~----~-~~Pv~ir~~~~~ 209 (367)
++.|++ . ++||+|-.+...
T Consensus 149 i~~A~~~A~~~~~GPV~l~iP~dv 172 (573)
T 2iht_A 149 VDSAVNAAMTEPVGPSFISLPVDL 172 (573)
T ss_dssp HHHHHHHHTBSSCCCEEEEEEHHH
T ss_pred HHHHHHHHhcCCCceEEEEecchH
Confidence 666654 3 589999876543
No 34
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=92.37 E-value=2.5 Score=42.78 Aligned_cols=153 Identities=16% Similarity=0.127 Sum_probs=82.6
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCC-ceeechhhHHHHHHHHHHHhccCCee--EEe
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPE-RVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~-R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~ 113 (367)
++..+++.+.|.+. .=+.++..+ +.. ...+.+.+.+ . +. +++.+ ..|+++.-+|.|.|+...|| ++.
T Consensus 21 ~~~a~~lv~~L~~~---GV~~vfg~P--G~~--~~~l~~al~~-~-~~~~~i~~-~~E~~Aa~~A~GyAr~tgkp~v~~~ 90 (565)
T 2nxw_A 21 MKLAEALLRALKDR---GAQAMFGIP--GDF--ALPFFKVAEE-T-QILPLHTL-SHEPAVGFAADAAARYSSTLGVAAV 90 (565)
T ss_dssp CBHHHHHHHHHHHT---TCCCEEECC--CGG--GHHHHHHHHH-H-CSSCEEEC-SSHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred cCHHHHHHHHHHHc---CCCEEEECC--Ccc--hHHHHHHHHh-C-CCcEEEec-CcHHHHHHHHHHHHHHhCCCeEEEE
Confidence 67888888888763 233344332 211 1123334433 3 33 44555 89999999999999984443 444
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCC--CCCCCC--Cch-hHH---HHHHhcCCCcEEEeeCCHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGA--AAGVGA--QHS-HCY---AAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~--~~g~G~--tH~-~~~---~a~~~~iP~~~V~~P~d~~ 185 (367)
|+.+. ..-++.-|.+ + +. .++||+++..+-. ..+.+. +|+ |.. ..+++.+--+... ..+++
T Consensus 91 TsGpG-~~N~~~gv~~-A-~~-------~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~~~-v~~~~ 159 (565)
T 2nxw_A 91 TYGAG-AFNMVNAVAG-A-YA-------EKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQAR-LDDPA 159 (565)
T ss_dssp CTTHH-HHTTHHHHHH-H-HH-------TTCCEEEEEEECCTTCC--CCCC-------CHHHHHHTTSCSCEEE-CCCTT
T ss_pred CCCCC-HHHHHHHHHH-H-Hh-------hCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheEEEE-eCCHH
Confidence 54443 3333444432 2 21 6899999864321 123332 242 222 3788888665443 34444
Q ss_pred HHHH----HHHHhHcCCCcEEEecccccc
Q 017695 186 DARG----LLKAAIRDPDPVVFLENELLY 210 (367)
Q Consensus 186 e~~~----~~~~a~~~~~Pv~ir~~~~~~ 210 (367)
++.. +++.|...++||+|-.++...
T Consensus 160 ~~~~~i~~A~~~A~~~~GPV~l~iP~Dv~ 188 (565)
T 2nxw_A 160 KAPAEIARVLGAARAQSRPVYLEIPRNMV 188 (565)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEEEGGGT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECChhhh
Confidence 4444 444444457999998776543
No 35
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=92.22 E-value=1.8 Score=43.76 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=86.3
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEecc
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVEFM 115 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~ 115 (367)
++..+++.+.|.+ .+=+.++..+ +.. ...+.+.+.+.- .=|++.+ ..|++++.+|.|.|+. |.-.++.|+
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~~~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~~v~~~Ts 73 (568)
T 2wvg_A 3 YTVGTYLAERLVQ---IGLKHHFAVA--GDY--NLVLLDNLLLNK-NMEQVYC-CNELNCGFSAEGYARAKGAAAAVVTY 73 (568)
T ss_dssp EEHHHHHHHHHHH---TTCSEEEECC--CTT--THHHHHHHHTCT-TSEEEEC-SSHHHHHHHHHHHHHHHSCEEEEECT
T ss_pred cCHHHHHHHHHHH---cCCCEEEeCC--CCc--cHHHHHHHhccC-CceEecc-CcHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 4566666666654 3444455443 211 112223333211 1367776 8999999999999986 733345565
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCC--Cch----hH-H-HHHHhcCCCcEEEeeCCHH
Q 017695 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA--QHS----HC-Y-AAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~--tH~----~~-~-~a~~~~iP~~~V~~P~d~~ 185 (367)
.+..++ ++.-|.+ + +. .++||+++..+-+. .+.+. +|. +. + ..+++.+--+ .+.+.+++
T Consensus 74 GpG~~N-~~~gia~-A-~~-------~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~ 142 (568)
T 2wvg_A 74 SVGALS-AFDAIGG-A-YA-------ENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAA-AEAIYTPE 142 (568)
T ss_dssp TTTHHH-HHHHHHH-H-HH-------TTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSC-EEEECSGG
T ss_pred CCCHHH-HHHHHHH-H-hh-------hCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeE-EEEeCCHH
Confidence 554443 4555543 2 22 68999998643222 22222 231 21 3 4899998766 44455666
Q ss_pred HHHHHHHHhH----cCCCcEEEecccc
Q 017695 186 DARGLLKAAI----RDPDPVVFLENEL 208 (367)
Q Consensus 186 e~~~~~~~a~----~~~~Pv~ir~~~~ 208 (367)
++...++.|+ ..++||+|-.+..
T Consensus 143 ~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 143 EAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 6665555554 3469999987654
No 36
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=92.14 E-value=1 Score=46.13 Aligned_cols=151 Identities=15% Similarity=0.043 Sum_probs=89.1
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEE--e
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVV--E 113 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~--~ 113 (367)
++..+++.+.|.+ ..=+.++..+ +.. ...+.+.+.+ .+.=|++.+ ..|++++.+|.|.|+. |.+|-+ .
T Consensus 27 ~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~-~~~i~~i~~-~~E~~Aa~~A~GyAr~tgg~~~v~~~ 97 (616)
T 2pan_A 27 MRAVDAAMYVLEK---EGITTAFGVP--GAA--INPFYSAMRK-HGGIRHILA-RHVEGASHMAEGYTRATAGNIGVCLG 97 (616)
T ss_dssp EEHHHHHHHHHHH---TTCCEEEECC--CGG--GHHHHHHHHH-HCCCEEEEC-SSHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CcHHHHHHHHHHH---CCCCEEEECC--CCc--cHHHHHHHHh-cCCCcEEee-CCHHHHHHHHHHHHHhcCCCceEEEe
Confidence 4677777777754 3445555543 211 1122233433 312366666 8999999999999998 566543 4
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLL 191 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~ 191 (367)
|+.+. ..-++.-|.+ +.+ .++|++++..+-+. .+.|..+......+++.+--+.. ...+++++..++
T Consensus 98 TsGpG-~~N~~~~l~~-A~~--------~~vPlvvItg~~p~~~~~~~~~Q~~d~~~~~~~~tk~~~-~v~~~~~i~~~l 166 (616)
T 2pan_A 98 TSGPA-GTDMITALYS-ASA--------DSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAV-TVREAALVPRVL 166 (616)
T ss_dssp CSTHH-HHTSHHHHHH-HHH--------TTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSEEE-ECCSGGGHHHHH
T ss_pred CCCch-HHHHHHHHHH-HHh--------cCCCEEEEecCCcccccCcccccccCHHHHHHHHHHhhc-ccCCHHHHHHHH
Confidence 65443 3334555543 322 58999998643222 23333221122478888876654 446677888888
Q ss_pred HHhHc-----CCCcEEEeccc
Q 017695 192 KAAIR-----DPDPVVFLENE 207 (367)
Q Consensus 192 ~~a~~-----~~~Pv~ir~~~ 207 (367)
+.|++ .++||+|-.+.
T Consensus 167 ~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 167 QQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp HHHHHHHHSSSCCCEEEEEEH
T ss_pred HHHHHHHhcCCCceEEEEcch
Confidence 87775 26899997654
No 37
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=91.75 E-value=1.3 Score=45.15 Aligned_cols=154 Identities=11% Similarity=0.001 Sum_probs=84.7
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EE
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VV 112 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~ 112 (367)
.+++..+++.+.|.+. .=+.++..+ +.. ...+.+.+.+.-..=|++.+ ..|+++.-+|.|.|+.-.+| ++
T Consensus 9 ~~~~~a~~l~~~L~~~---GV~~vfg~P--G~~--~~~l~dal~~~~~~i~~i~~-~hE~~Aa~aA~GyAr~tg~~gv~~ 80 (603)
T 4feg_A 9 TNILAGAAVIKVLEAW---GVDHLYGIP--GGS--INSIMDALSAERDRIHYIQV-RHEEVGAMAAAADAKLTGKIGVCF 80 (603)
T ss_dssp CEEEHHHHHHHHHHHT---TCCEEEECC--CGG--GHHHHHHHHHTTTTSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CeeeHHHHHHHHHHHC---CCCEEEEeC--CCc--hHHHHHHHHhccCCCeEEEe-cChHHHHHHHHHHHHHhCCceEEE
Confidence 4567777777777653 334444433 211 11233344332112377776 79999999999999874443 33
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCC--CCCCCchhHH-HHHHhcCCCcEEEeeCCHHHHHH
Q 017695 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--GVGAQHSHCY-AAWYASVPGLKVLSPYSSEDARG 189 (367)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g~G~tH~~~~-~a~~~~iP~~~V~~P~d~~e~~~ 189 (367)
.|+.+.. .-++.-|.+ + +. .++||+++..+-+.. +.+..+ ..+ ..+++.+--+... ..+++++..
T Consensus 81 ~TsGpG~-~N~~~gia~-A-~~-------~~vPvl~itG~~~~~~~~~~~~Q-~~d~~~~~~~~tk~~~~-v~~~~~~~~ 148 (603)
T 4feg_A 81 GSAGPGG-THLMNGLYD-A-RE-------DHVPVLALIGQFGTTGMNMDTFQ-EMNENPIYADVADYNVT-AVNAATLPH 148 (603)
T ss_dssp ECTTHHH-HTTHHHHHH-H-HH-------TTCCEEEEEEECCTTTTTSCCTT-CCCCGGGGTTTCSEEEE-CCCSTTHHH
T ss_pred ecCCchH-HHHHHHHHH-H-HH-------cCCCEEEEecCCcccccCCCccc-cccHHHHhhhhceEEEE-cCCHHHHHH
Confidence 4554433 334444432 2 21 689999986432222 222222 122 3788887655433 334444544
Q ss_pred HH----HHhHcCCCcEEEecccc
Q 017695 190 LL----KAAIRDPDPVVFLENEL 208 (367)
Q Consensus 190 ~~----~~a~~~~~Pv~ir~~~~ 208 (367)
.+ +.|...++||+|-.|..
T Consensus 149 ~i~~A~~~A~~~~GPV~l~iP~d 171 (603)
T 4feg_A 149 VIDEAIRRAYAHQGVAVVQIPVD 171 (603)
T ss_dssp HHHHHHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHHhcCCCCEEEEeChh
Confidence 44 44444589999986654
No 38
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=91.60 E-value=2.1 Score=44.54 Aligned_cols=149 Identities=15% Similarity=0.090 Sum_probs=87.4
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhC--C-CceeechhhHHHHHHHHHHHhcc-CCe-eE
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYG--P-ERVLDTPITEAGFTGIGVGAAYY-GLK-PV 111 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~--p-~R~i~~GIaE~~~vg~AaGlA~~-G~~-p~ 111 (367)
++..+++.+.|.+ ..=+.++..+ + +. ...|.+.+. + =|++.+ ..|++++.+|.|.|+. |.. .+
T Consensus 82 ~~~a~~lv~~L~~---~GV~~vFg~P--G---~~---~~pl~dal~~~~~i~~v~~-~hE~~Aa~aAdGyAr~tGkpgvv 149 (677)
T 1t9b_A 82 LTGGQIFNEMMSR---QNVDTVFGYP--G---GA---ILPVYDAIHNSDKFNFVLP-KHEQGAGHMAEGYARASGKPGVV 149 (677)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECC--C---GG---GHHHHHHTTTCSSSEEECC-SSHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCHHHHHHHHHHH---cCCCEEEEec--C---cc---HHHHHHHHHhCCCCeEEEe-CChHHHHHHHHHHHHHHCCCEEE
Confidence 4566666666654 3444455443 2 11 124444431 1 266666 7999999999999997 543 34
Q ss_pred EecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHHHHHHhcCCCcEEEeeCCHHHHHH
Q 017695 112 VEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARG 189 (367)
Q Consensus 112 ~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~ 189 (367)
+.|+.+. ..-++.-|.+ + +. .++||+++..+-.. .+.|..+......+++.+--+.. ...+++++..
T Consensus 150 ~~TsGpG-~~N~~~gia~-A-~~-------d~vPllvItG~~~~~~~g~~a~Q~~Dq~~i~~~~tk~~~-~v~~~~~i~~ 218 (677)
T 1t9b_A 150 LVTSGPG-ATNVVTPMAD-A-FA-------DGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSCTKWNV-MVKSVEELPL 218 (677)
T ss_dssp EECSTHH-HHTTHHHHHH-H-HH-------HTCCEEEEEEECCTTTTTSCCTTCCCHHHHTGGGSSEEE-ECCSGGGHHH
T ss_pred EECCChH-HHHHHHHHHH-H-HH-------cCCCEEEEeCCCChhhcCCCCccccCHHHHhhhheeEEE-EcCCHHHHHH
Confidence 4455443 3334444433 2 21 58999998643222 23333321122478888876644 4557788888
Q ss_pred HHHHhHc-----CCCcEEEecccc
Q 017695 190 LLKAAIR-----DPDPVVFLENEL 208 (367)
Q Consensus 190 ~~~~a~~-----~~~Pv~ir~~~~ 208 (367)
.++.|++ .++||+|-.+..
T Consensus 219 ~i~~A~~~A~~grpGPV~l~lP~D 242 (677)
T 1t9b_A 219 RINEAFEIATSGRPGPVLVDLPKD 242 (677)
T ss_dssp HHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHhhCCCceEEEEcCHH
Confidence 8877776 368999976643
No 39
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=91.57 E-value=2 Score=43.46 Aligned_cols=152 Identities=17% Similarity=0.140 Sum_probs=84.0
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEecc
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVEFM 115 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~ 115 (367)
++..+++.+.|.+. +=+.++..+ +.. ...+.+.+.+.- .=|++.+ ..|++++.+|.|.|+. |.-.++.|+
T Consensus 3 ~~~a~~l~~~L~~~---GV~~vfg~P--G~~--~~~l~~al~~~~-~i~~v~~-~~E~~Aa~~A~Gyar~tg~~v~~~Ts 73 (566)
T 2vbi_A 3 YTVGMYLAERLVQI---GLKHHFAVA--GDY--NLVLLDQLLLNK-DMKQIYC-CNELNCGFSAEGYARSNGAAAAVVTF 73 (566)
T ss_dssp CBHHHHHHHHHHHH---TCSEEEECC--CTT--THHHHHHHHTCT-TSEEEEC-SSHHHHHHHHHHHHHHHSCEEEEECT
T ss_pred cCHHHHHHHHHHHc---CCCEEEeCC--CCc--cHHHHHHHhcCC-CCeEEee-CcHHHHHHHHHHHHhhcCCeEEEEeC
Confidence 46677777777653 444455443 211 112223333211 1367766 7999999999999987 722344455
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCC--Cch----hH-H-HHHHhcCCCcEEEeeCCHH
Q 017695 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA--QHS----HC-Y-AAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~--tH~----~~-~-~a~~~~iP~~~V~~P~d~~ 185 (367)
.+..+ -++.-|.+ + +. .++||+++..+-+. .+.+. +|. +. + ..+++.+--+. +.+.+++
T Consensus 74 GpG~~-N~~~gia~-A-~~-------~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~~-~~v~~~~ 142 (566)
T 2vbi_A 74 SVGAI-SAMNALGG-A-YA-------ENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTCAA-ESITDAH 142 (566)
T ss_dssp TTTHH-HHHHHHHH-H-HH-------TTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHHHHTTCSEE-EEECSSS
T ss_pred CCCHH-HHHHHHHH-H-Hh-------hCCCEEEEECCCChHHhccCceeeeeccCcchHHHHHHHhhhEeEE-EEeCCHH
Confidence 44443 34555543 2 22 68999998643222 22222 231 21 3 48999886553 3444555
Q ss_pred HHHHHHHH----hHcCCCcEEEecccc
Q 017695 186 DARGLLKA----AIRDPDPVVFLENEL 208 (367)
Q Consensus 186 e~~~~~~~----a~~~~~Pv~ir~~~~ 208 (367)
++...++. |...++||+|-.+..
T Consensus 143 ~~~~~l~~A~~~a~~~~GPV~l~iP~d 169 (566)
T 2vbi_A 143 SAPAKIDHVIRTALRERKPAYLDIACN 169 (566)
T ss_dssp SHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 55444444 444579999987654
No 40
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=91.08 E-value=0.9 Score=46.31 Aligned_cols=152 Identities=15% Similarity=0.092 Sum_probs=85.2
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEe
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~ 113 (367)
.++..+++.+.|.+ .+=+.++..+ +.. ...+.+.+.+.-+.=|++.+ ..|+++..+|-|.|+...+| ++.
T Consensus 3 ~~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~~~~~i~~v~~-~hE~~Aa~~A~GyAr~tg~p~v~~~ 74 (589)
T 2pgn_A 3 IKRGADLIVEALEE---YGTEQVVGFI--GHT--SHFVADAFSKSHLGKRVINP-ATELGGAWMVNGYNYVKDRSAAVGA 74 (589)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEEEC--SGG--GHHHHHHHHTSTTSTTCBCC-SSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCcHHHHHHHHHHH---cCCCEEEEec--CCc--hHHHHHHHHhcCCCCeEEEe-CcHHHHHHHHHHHHHHHCCCEEEEE
Confidence 35666777766655 3334444433 211 11222333221001267766 79999999999999984443 445
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCC-CCchhHH-HHHHhcCCCcEEEeeCCHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG-AQHSHCY-AAWYASVPGLKVLSPYSSEDARG 189 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G-~tH~~~~-~a~~~~iP~~~V~~P~d~~e~~~ 189 (367)
|+.+..+ -++.-|.+ + +. .++||+++..+-+. .+.| ..| ..+ .. ++.+.-+. +...+++++..
T Consensus 75 TsGpG~~-N~~~gv~~-A-~~-------~~vPll~itg~~~~~~~~~~~~~Q-~~d~~~-~~~~tk~~-~~v~~~~~~~~ 141 (589)
T 2pgn_A 75 WHCVGNL-LLHAAMQE-A-RT-------GRIPAVHIGLNSDGRLAGRSEAAQ-QVPWQS-FTPIARST-QRVERLDKVGE 141 (589)
T ss_dssp EEGGGGG-GCHHHHHH-H-HH-------TTCCEEEEEEESCGGGTTCTTCSS-CCCGGG-GTTTSSEE-EECCSGGGHHH
T ss_pred ecCchHH-HHHHHHHH-H-Hh-------cCCCEEEEecCCcccccCCCCccc-ccChhh-ccccEEEE-eecCCHHHHHH
Confidence 5544433 33444433 2 21 68999998643222 2334 333 223 26 88877654 44566777776
Q ss_pred HHHHhHc----C-CCcEEEecccc
Q 017695 190 LLKAAIR----D-PDPVVFLENEL 208 (367)
Q Consensus 190 ~~~~a~~----~-~~Pv~ir~~~~ 208 (367)
.++.|++ . ++||+|-.+..
T Consensus 142 ~i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 142 AIHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp HHHHHHHHHTSSSCCEEEEEEETH
T ss_pred HHHHHHHHHhcCCCccEEEEeCHh
Confidence 6666654 3 58999987654
No 41
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=90.75 E-value=2.4 Score=42.80 Aligned_cols=151 Identities=13% Similarity=0.092 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhC--C-CceeechhhHHHHHHHHHHHhcc-CCeeE
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYG--P-ERVLDTPITEAGFTGIGVGAAYY-GLKPV 111 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~--p-~R~i~~GIaE~~~vg~AaGlA~~-G~~p~ 111 (367)
+++..+++.+.|.+ ..=+.++..+ + ... ..|.+.+. + =|++.+ ..|++++.+|.|.|+. |.-.+
T Consensus 3 ~~~~a~~l~~~L~~---~GV~~vfg~P--G----~~~--~~l~~al~~~~~i~~v~~-~~E~~Aa~~A~Gyar~tg~~v~ 70 (563)
T 2vk8_A 3 EITLGKYLFERLKQ---VNVNTVFGLP--G----DFN--LSLLDKIYEVEGMRWAGN-ANELNAAYAADGYARIKGMSCI 70 (563)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEECC--C----GGG--HHHHHGGGGSTTCEECCC-SSHHHHHHHHHHHHHHHSCEEE
T ss_pred ccCHHHHHHHHHHH---cCCCEEEEcC--C----cch--HHHHHHHhhcCCceEEcc-CchHHHHHHHHHHHHhhCCcEE
Confidence 35667777776654 3344454443 2 111 23443331 1 266665 7999999999999997 72234
Q ss_pred EecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCC----CCCCCc------hhHHHHHHhcCCCcEEEee
Q 017695 112 VEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA----GVGAQH------SHCYAAWYASVPGLKVLSP 181 (367)
Q Consensus 112 ~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~----g~G~tH------~~~~~a~~~~iP~~~V~~P 181 (367)
+.|+.+..+ -++.-|.+ + +. .++||+++..+-+.. +...+| .|....+++.+--+... .
T Consensus 71 ~~TsGpG~~-N~~~gia~-A-~~-------~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~~~~~~k~~~~-v 139 (563)
T 2vk8_A 71 ITTFGVGEL-SALNGIAG-S-YA-------EHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTAM-I 139 (563)
T ss_dssp EEETTHHHH-HHHHHHHH-H-HH-------HTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHHHHTTCSEEEE-C
T ss_pred EEcCCCcHH-HHHHHHHH-H-Hh-------hCCCEEEEECCCChHHhhcccccccccCCcchHHHHHHhhhhEEEEEE-e
Confidence 445544433 34455443 2 21 589999985422110 101111 13335788888765443 4
Q ss_pred CCH----HHHHHHHHHhHcCCCcEEEeccccc
Q 017695 182 YSS----EDARGLLKAAIRDPDPVVFLENELL 209 (367)
Q Consensus 182 ~d~----~e~~~~~~~a~~~~~Pv~ir~~~~~ 209 (367)
.++ ..+..+++.|...++||+|-.+...
T Consensus 140 ~~~~~~~~~i~~A~~~A~~~~GPV~l~iP~d~ 171 (563)
T 2vk8_A 140 TDIATAPAEIDRCIRTTYVTQRPVYLGLPANL 171 (563)
T ss_dssp CCTTTHHHHHHHHHHHHHHHTSCEEEEEETTG
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 444 4455555555555799999876543
No 42
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=90.58 E-value=0.41 Score=48.07 Aligned_cols=148 Identities=17% Similarity=0.129 Sum_probs=82.3
Q ss_pred cHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhC-CCceeechhhHHHHHHHHHHHhcc-CCeeEE-ec
Q 017695 38 MVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYG-PERVLDTPITEAGFTGIGVGAAYY-GLKPVV-EF 114 (367)
Q Consensus 38 ~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~-p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~-~~ 114 (367)
+..+++.+.|.+ ..=+.++..+ + .. ...|.+.+. .=|++.+ ..|++++.+|.|.|+. |...++ .|
T Consensus 3 ~~a~~l~~~L~~---~GV~~vfg~P--G----~~--~~~l~~al~~~i~~i~~-~~E~~Aa~~A~Gyar~tg~~~v~~~t 70 (528)
T 1q6z_A 3 SVHGTTYELLRR---QGIDTVFGNP--G----SN--ALPFLKDFPEDFRYILA-LQEACVVGIADGYAQASRKPAFINLH 70 (528)
T ss_dssp BHHHHHHHHHHH---TTCCEEEECC--C----GG--GHHHHTTCCTTCEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred cHHHHHHHHHHH---CCCCEEEECC--C----cc--hHHHHHHHhhcCcEEEE-CcHHHHHHHHHHHHHHhCCCEEEEEc
Confidence 445555555544 3344444433 2 11 134444441 1366666 7999999999999998 544444 33
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCCCchhHH-HHHHhcCCCcEEEeeCCHHHHHHHH
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCY-AAWYASVPGLKVLSPYSSEDARGLL 191 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tH~~~~-~a~~~~iP~~~V~~P~d~~e~~~~~ 191 (367)
..+ .+.-++.-|.+ + +. .++||+++..+-+. .+.|..+...+ ..+++.+..+. ..+.+++++...+
T Consensus 71 sGp-G~~N~~~~l~~-A-~~-------~~~Pll~itg~~~~~~~~~~~~q~~~d~~~~~~~~~k~~-~~v~~~~~~~~~i 139 (528)
T 1q6z_A 71 SAA-GTGNAMGALSN-A-WN-------SHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKWS-YEPASAAEVPHAM 139 (528)
T ss_dssp HHH-HHHHTHHHHHH-H-HH-------TTCCEEEEEEECCHHHHTTTCTTCCTTGGGSSTTSCSCE-ECCSSGGGHHHHH
T ss_pred CCh-HHHHHHHHHHH-H-hh-------cCCCEEEEeCCCcccccCCCcccccccHHHHHHHhhHhh-hcCCCHHHHHHHH
Confidence 333 33345555543 2 22 68999998542211 13232221113 37888877663 4455666666555
Q ss_pred HHhHc----C-CCcEEEecccc
Q 017695 192 KAAIR----D-PDPVVFLENEL 208 (367)
Q Consensus 192 ~~a~~----~-~~Pv~ir~~~~ 208 (367)
+.|++ . ++||+|-.+..
T Consensus 140 ~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 140 SRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp HHHHHHHHSSSCCCEEEEEEGG
T ss_pred HHHHHHHhcCCCCcEEEEechh
Confidence 55554 3 58999977654
No 43
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=89.96 E-value=1.5 Score=44.36 Aligned_cols=154 Identities=13% Similarity=0.000 Sum_probs=87.4
Q ss_pred ccccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEE
Q 017695 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVV 112 (367)
Q Consensus 35 ~~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~-p~~ 112 (367)
.+++..+++.+.|.+. +=+.++..+ +. ....+.+.+.+ . .=|++.+ ..|+++.-+|-|.|+. |.. .++
T Consensus 8 ~~~~~a~~l~~~L~~~---GV~~vfg~P--G~--~~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~GyAr~tg~pgv~~ 77 (568)
T 2c31_A 8 ELTDGFHVLIDALKMN---DIDTMYGVV--GI--PITNLARMWQD-D-GQRFYSF-RHEQHAGYAASIAGYIEGKPGVCL 77 (568)
T ss_dssp CEEEHHHHHHHHHHHT---TCCEEEECC--CT--TTHHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CcccHHHHHHHHHHHc---CCCEEEEeC--CC--ccHHHHHHHHh-C-CCcEEEe-CcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4467788887777653 334444433 21 11122233332 2 3477777 8999999999999998 542 344
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCC--C--CCCCchhHHHHHHhcCCCcEEEeeCCHHHHH
Q 017695 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--G--VGAQHSHCYAAWYASVPGLKVLSPYSSEDAR 188 (367)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g--~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~ 188 (367)
.|+.+ ...-++.-|.+ + +. .++||+++..+-+.. + .|..+......+++.+--+.. ...+++++.
T Consensus 78 ~TsGp-G~~N~~~~i~~-A-~~-------~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~~-~v~~~~~~~ 146 (568)
T 2c31_A 78 TVSAP-GFLNGVTSLAH-A-TT-------NCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKASF-RINSIKDIP 146 (568)
T ss_dssp ECSHH-HHHHHHHHHHH-H-HH-------HTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSSEEE-ECCSGGGHH
T ss_pred EcCCc-cHHHHHHHHHH-H-Hh-------cCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhhheee-ecCCHHHHH
Confidence 45544 33444555443 2 21 689999986432211 2 233221122478888876643 445565665
Q ss_pred HHHHHhHc-----CCCcEEEeccccc
Q 017695 189 GLLKAAIR-----DPDPVVFLENELL 209 (367)
Q Consensus 189 ~~~~~a~~-----~~~Pv~ir~~~~~ 209 (367)
..++.|++ .++||+|-.+..+
T Consensus 147 ~~i~~A~~~A~~~~~GPV~l~iP~dv 172 (568)
T 2c31_A 147 IGIARAVRTAVSGRPGGVYVDLPAKL 172 (568)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEETHH
T ss_pred HHHHHHHHHhcCCCCceEEEeCCHHH
Confidence 55555543 4699999776543
No 44
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=89.90 E-value=3.3 Score=41.73 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=86.0
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEe
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~ 113 (367)
.++..+++.+.|.+. .=+-++..+ +. ....+.+.+.+ - .=|++.+ ..|+++.-+|-|.|+.-.+| +++
T Consensus 7 ~~~~a~~l~~~L~~~---GV~~vfg~P--G~--~~~~l~~al~~-~-~i~~i~~-~hE~~Aa~~A~Gyar~tg~pgv~~~ 76 (564)
T 2q28_A 7 MTDGMHIIVEALKQN---NIDTIYGVV--GI--PVTDMARHAQA-E-GIRYIGF-RHEQSAGYAAAASGFLTQKPGICLT 76 (564)
T ss_dssp EEEHHHHHHHHHHHT---TCCEEEECC--CT--TTHHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred cCcHHHHHHHHHHHc---CCCEEEECC--Cc--chHHHHHHHHh-C-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 456777777777653 334444433 21 11122233332 2 3477777 89999999999999984443 444
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCCC--C--CCCCchhHHHHHHhcCCCcEEEeeCCHHHHHH
Q 017695 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--G--VGAQHSHCYAAWYASVPGLKVLSPYSSEDARG 189 (367)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g--~G~tH~~~~~a~~~~iP~~~V~~P~d~~e~~~ 189 (367)
|+.+ ...-++.-|.+ + +. .++||+++..+-+.. + .|..+......+++.+--+... ..+++++..
T Consensus 77 TsGp-G~~N~~~gi~~-A-~~-------~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~~~-v~~~~~~~~ 145 (564)
T 2q28_A 77 VSAP-GFLNGLTALAN-A-TV-------NGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFR-VNQPQDLGI 145 (564)
T ss_dssp CSHH-HHHHHHHHHHH-H-HH-------HTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSSEEEE-CCSGGGHHH
T ss_pred ccCc-hHHHHHHHHHH-H-Hh-------cCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhhheeee-cCCHHHHHH
Confidence 5544 33344455433 2 21 689999986432221 2 2332211223788888766444 345555555
Q ss_pred HHHHhHc-----CCCcEEEecccc
Q 017695 190 LLKAAIR-----DPDPVVFLENEL 208 (367)
Q Consensus 190 ~~~~a~~-----~~~Pv~ir~~~~ 208 (367)
.++.|++ .++||+|-.+..
T Consensus 146 ~i~~A~~~A~~~~~GPV~l~iP~d 169 (564)
T 2q28_A 146 ALARAIRVSVSGRPGGVYLDLPAN 169 (564)
T ss_dssp HHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHhcCCCceEEEEcCHH
Confidence 5555543 469999977654
No 45
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=89.32 E-value=2.2 Score=43.13 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=69.3
Q ss_pred ceeechhhHHHHHHHHHHHhcc-CCe-eEEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCCC
Q 017695 85 RVLDTPITEAGFTGIGVGAAYY-GLK-PVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA 160 (367)
Q Consensus 85 R~i~~GIaE~~~vg~AaGlA~~-G~~-p~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~ 160 (367)
|++-+ ..|+++.-+|-|.|+. |.. .++.|+.+.. .-++--|.+ + +. .++||+++..+-+. .|.|.
T Consensus 48 ~~i~~-~hE~~Aa~~AdGyAr~tG~pgv~~~TsGpG~-~N~~~gia~-A-~~-------d~vPll~itG~~~~~~~g~~~ 116 (556)
T 3hww_A 48 IHHTH-FDERGLGHLALGLAKVSKQPVAVIVTSGTAV-ANLYPALIE-A-GL-------TGEKLILLTADRPPELIDCGA 116 (556)
T ss_dssp EEEEC-SCHHHHHHHHHHHHHHHCSCEEEEECSSHHH-HTTHHHHHH-H-HH-------HCCCEEEEEEECCGGGSSSSC
T ss_pred eEEEe-cCCcHHHHHHHHHHHhhCCCEEEEECCCcHH-HhhhHHHHH-H-HH-------hCCCeEEEeCCCCHHHhccCC
Confidence 66664 6899999999999997 533 3444654443 334444432 2 21 68999998643222 23333
Q ss_pred CchhHH-HHHHhcCCCcEEEee--CC---HHHHHHHHHHhHcC--CCcEEEeccc
Q 017695 161 QHSHCY-AAWYASVPGLKVLSP--YS---SEDARGLLKAAIRD--PDPVVFLENE 207 (367)
Q Consensus 161 tH~~~~-~a~~~~iP~~~V~~P--~d---~~e~~~~~~~a~~~--~~Pv~ir~~~ 207 (367)
|+..| ..+++.+--+..-.+ .+ ++++..+++.|+.. ++||+|-.+.
T Consensus 117 -~Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~~i~~A~~~~r~GPV~i~iP~ 170 (556)
T 3hww_A 117 -NQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPF 170 (556)
T ss_dssp -TTCCCCTTTTTTCSSEEEECCCCCTTSCHHHHHHHHHHHHHSCCSSCEEEEEEC
T ss_pred -CccccHHHHHhhheeEEEecCCCcccccHHHHHHHHHHHHhcCCCCCEEEeCCc
Confidence 31223 378888776655543 32 45688899999863 6899997664
No 46
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=87.41 E-value=2.6 Score=43.77 Aligned_cols=150 Identities=14% Similarity=0.107 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechh--hHHHHHHHHHHHhccC-CeeEEecccc
Q 017695 41 EALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTF 117 (367)
Q Consensus 41 ~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~ 117 (367)
..+.+.|.+.+...++-++++.|++... .+. ..+..-..|.+|+..|. +=-..+++|.|++++. -++++++. .
T Consensus 464 ~~v~~~L~~~l~~~~~~~iv~~~vg~~~-~~~--~~~~~~~~p~~~~~sg~~G~mG~~lpaAiGaalA~p~~~Vv~i~-G 539 (677)
T 1t9b_A 464 QTVIKKLSKVANDTGRHVIVTTGVGQHQ-MWA--AQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDID-G 539 (677)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEECSSHHH-HHH--HHHSCCCSTTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEEE-E
T ss_pred HHHHHHHHHHhhcCCCCEEEEeCCchHH-HHH--HHhcccCCCCeEEeCCCcchhhchHHHHHHHHHhCCCCeEEEEE-e
Confidence 3455666666644233344455554211 110 11111112778888664 1222677888888763 35566554 3
Q ss_pred cH-HHHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCC---------CC---CCCC-chhHHHHHHhcCCCcEEEee
Q 017695 118 NF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAA---------AG---VGAQ-HSHCYAAWYASVPGLKVLSP 181 (367)
Q Consensus 118 ~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~---------~g---~G~t-H~~~~~a~~~~iP~~~V~~P 181 (367)
+. .+..+..+. .++. .++|++++. .+|.. .+ .+.. +...+..+..++ |+..+..
T Consensus 540 DGsf~~~~~eL~-ta~~--------~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~-G~~~~~v 609 (677)
T 1t9b_A 540 DASFNMTLTELS-SAVQ--------AGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAM-GLKGLRV 609 (677)
T ss_dssp HHHHHHHGGGHH-HHHH--------HTCCCEEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHT-TCEEEEE
T ss_pred ehHHhccHHHHH-HHHH--------hCCCeEEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHc-CCeEEEE
Confidence 32 222344432 2333 467765543 23321 00 0111 112234566665 7777888
Q ss_pred CCHHHHHHHHHHhHcCCCcEEEe
Q 017695 182 YSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 182 ~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.+.+|+..+++++++.++|++|-
T Consensus 610 ~~~~el~~al~~a~~~~gp~lIe 632 (677)
T 1t9b_A 610 KKQEELDAKLKEFVSTKGPVLLE 632 (677)
T ss_dssp CSHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEE
Confidence 99999999999999989999884
No 47
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=87.11 E-value=5.5 Score=39.93 Aligned_cols=153 Identities=11% Similarity=0.124 Sum_probs=82.7
Q ss_pred cccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee-EEec
Q 017695 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP-VVEF 114 (367)
Q Consensus 36 ~~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~G~~p-~~~~ 114 (367)
.++..+++.+.|.+ ..=+.++..+ +.. ...+.+.+.+ .+.=|++.+ ..|++++.+|.|.|+....+ ++.|
T Consensus 4 ~~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~-~~~i~~i~~-~~E~~A~~~A~Gyar~tg~~v~~~t 74 (552)
T 1ovm_A 4 PYCVADYLLDRLTD---CGADHLFGVP--GDY--NLQFLDHVID-SPDICWVGC-ANELNASYAADGYARCKGFAALLTT 74 (552)
T ss_dssp CCBHHHHHHHHHHH---TTCCEEEECC--CGG--GHHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred ccCHHHHHHHHHHH---cCCCEEEECC--Chh--HHHHHHHHhc-CCCceEEee-CcHHHHHHHHHHHHHhhCCcEEEEc
Confidence 35677777777655 3445555443 211 1122233332 211356665 79999999999999873344 3344
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--C--C------CCC-CchhHHHHHHhcCCCcEEEeeC-
Q 017695 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--A--G------VGA-QHSHCYAAWYASVPGLKVLSPY- 182 (367)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~--g------~G~-tH~~~~~a~~~~iP~~~V~~P~- 182 (367)
+.+. ..-++--|.+ + +. .++|++++..+-+. . + .|. .+ |....+++.+--+....+.
T Consensus 75 sGpG-~~N~~~gv~~-A-~~-------~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~-q~~~~~~~~~tk~~~~v~~~ 143 (552)
T 1ovm_A 75 FGVG-ELSAMNGIAG-S-YA-------EHVPVLHIVGAPGTAAQQRGELLHHTLGDGEF-RHFYHMSEPITVAQAVLTEQ 143 (552)
T ss_dssp TTHH-HHHTHHHHHH-H-HH-------TTCCEEEEEEECCHHHHHHTCCCTTSCSSSCC-SHHHHHTGGGCSEEEECCTT
T ss_pred cCCc-HHHHHHHHHH-H-hh-------hcCCEEEEECCCCHHHHhcccccccccCCCcH-HHHHHHHHhheeEEEEEccc
Confidence 4333 3334444433 2 21 68999998532111 0 1 111 12 3334788888766555554
Q ss_pred -CHHHHHHHHHHhHcCCCcEEEecccc
Q 017695 183 -SSEDARGLLKAAIRDPDPVVFLENEL 208 (367)
Q Consensus 183 -d~~e~~~~~~~a~~~~~Pv~ir~~~~ 208 (367)
-+..+..+++.|...++||+|-.+..
T Consensus 144 ~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 144 NACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred cHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 13344445555554469999976654
No 48
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=86.51 E-value=3 Score=42.32 Aligned_cols=112 Identities=15% Similarity=0.114 Sum_probs=64.7
Q ss_pred CceeechhhHHHHHHHHHHHhccCCee--EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCC
Q 017695 84 ERVLDTPITEAGFTGIGVGAAYYGLKP--VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG 159 (367)
Q Consensus 84 ~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G 159 (367)
=|++.+ ..|+++.-+|-|.|+.-.+| +++|+.+.. .-++--|.+ + +. ..+||+++..+-+. .|.|
T Consensus 50 i~~i~~-~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~-~N~~~gia~-A-~~-------d~vPll~itG~~p~~~~g~~ 118 (578)
T 3lq1_A 50 LKIYVD-VDERSAGFFALGLAKASKRPVVLLCTSGTAA-ANYFPAVAE-A-NL-------SQIPLIVLTADRPHELRNVG 118 (578)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHCCCEEEEECSSHHH-HTTHHHHHH-H-HH-------TTCCEEEEEEECCGGGTTSS
T ss_pred ceEEEe-cCcHHHHHHHHHHHHhhCCCEEEEECCchhh-hhhhHHHHH-H-Hh-------cCCCeEEEeCCCCHHhhcCC
Confidence 377776 69999999999999983333 444554443 333344432 2 22 68999998643222 1333
Q ss_pred CCchhHH-HHHHhcCCCcEEE--eeCCHHH--------HHHHHHHhHc-CCCcEEEeccc
Q 017695 160 AQHSHCY-AAWYASVPGLKVL--SPYSSED--------ARGLLKAAIR-DPDPVVFLENE 207 (367)
Q Consensus 160 ~tH~~~~-~a~~~~iP~~~V~--~P~d~~e--------~~~~~~~a~~-~~~Pv~ir~~~ 207 (367)
..| ..| ..+++.+--+... .|.+..+ +..+++.|.. .++||+|-.|.
T Consensus 119 ~~Q-e~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 119 APQ-AMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp CTT-CCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred CCC-CcCHhhHHhhheeeEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 322 222 3678777655443 4555332 3444444444 37999997664
No 49
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=85.48 E-value=3.7 Score=41.80 Aligned_cols=113 Identities=17% Similarity=0.065 Sum_probs=66.0
Q ss_pred CceeechhhHHHHHHHHHHHhccCCee--EEecccccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCC
Q 017695 84 ERVLDTPITEAGFTGIGVGAAYYGLKP--VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG 159 (367)
Q Consensus 84 ~R~i~~GIaE~~~vg~AaGlA~~G~~p--~~~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G 159 (367)
=|++.+ ..|+++.-+|-|.|+.-.|| ++.|+.+.. .-++.-|.+ + +. .++||+++..+-+. .|.|
T Consensus 70 i~~i~~-~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~-~N~~~gia~-A-~~-------~~vPlv~ItG~~~~~~~g~~ 138 (604)
T 2x7j_A 70 ISVHVQ-IDERSAGFFALGLAKAKQRPVLLICTSGTAA-ANFYPAVVE-A-HY-------SRVPIIVLTADRPHELREVG 138 (604)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECSSHHH-HTTHHHHHH-H-HH-------HTCCEEEEEEECCGGGSSSC
T ss_pred ceEEEe-cChHHHHHHHHHHHHhhCCCEEEEECChhHH-HHHHHHHHH-H-hh-------cCCCEEEEeCCCCHHHhCCC
Confidence 377777 89999999999999984444 444554433 333444432 2 21 58999998643222 1223
Q ss_pred CCchhHH-HHHHhcCCCcEEEe--eCC--------HHHHHHHHHHhHc-CCCcEEEecccc
Q 017695 160 AQHSHCY-AAWYASVPGLKVLS--PYS--------SEDARGLLKAAIR-DPDPVVFLENEL 208 (367)
Q Consensus 160 ~tH~~~~-~a~~~~iP~~~V~~--P~d--------~~e~~~~~~~a~~-~~~Pv~ir~~~~ 208 (367)
..+ ..+ ..+++.+--+.... |.+ ++.+..+++.|.. .++||+|-.+..
T Consensus 139 ~~Q-~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 139 APQ-AINQHFLFGNFVKFFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp CTT-CCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred CCC-cCcHHHHhhhheeeeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 222 222 26777776554433 443 3344455555554 479999976643
No 50
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=85.05 E-value=3.9 Score=41.28 Aligned_cols=151 Identities=14% Similarity=0.123 Sum_probs=82.0
Q ss_pred ccHHHHHHHHHHHHHhhCCcEEEEecCCCCcccccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEecc
Q 017695 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVEFM 115 (367)
Q Consensus 37 ~~~r~a~~~~L~~l~~~d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GIaE~~~vg~AaGlA~~-G~~p~~~~~ 115 (367)
++..+++.+.|.+ ..=+.++..+ +.. ...+.+.+.+ .+.=|++.+ ..|++++.+|.|.|+. |.-.++.|+
T Consensus 25 ~~~a~~l~~~L~~---~GV~~vfg~P--G~~--~~~l~~al~~-~~~i~~i~~-~~E~~A~~~A~GyAr~tG~~v~~~ts 95 (570)
T 2vbf_A 25 YTVGDYLLDRLHE---LGIEEIFGVP--GDY--NLQFLDQIIS-REDMKWIGN-ANELNASYMADGYARTKKAAAFLTTF 95 (570)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECC--CGG--GHHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHSCEEEEEET
T ss_pred CCHHHHHHHHHHH---cCCCEEEECC--Ccc--hHHHHHHHhc-CCCCeEECc-CcHHHHHHHHHHHHHHhCCeEEEEcC
Confidence 5677777777765 3444455443 211 1122233332 212366665 7999999999999965 722234454
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccccEEEEeCCCCC--CCCC-CCch-----h--HHHHHHhcCCCcEEEeeCCHH
Q 017695 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG-AQHS-----H--CYAAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G-~tH~-----~--~~~a~~~~iP~~~V~~P~d~~ 185 (367)
.+ ...-++.-|.+ + +. .++|++++..+-+. .+.+ ..|+ + ....+++.+.-+....+. +
T Consensus 96 Gp-G~~N~~~gi~~-A-~~-------~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tk~~~~v~~--~ 163 (570)
T 2vbf_A 96 GV-GELSAINGLAG-S-YA-------ENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKMHEPVTAARTLLTA--E 163 (570)
T ss_dssp TH-HHHHHHHHHHH-H-HH-------TTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHHTGGGCSEEEECCT--T
T ss_pred CC-CHHHHHHHHHH-H-hh-------hCCCEEEEeCCCCHHHhhccccceeeccccchHHHHHHhhhhEEEEEEECc--c
Confidence 33 33334555543 2 21 68999998632111 1111 1121 1 124788888766555543 5
Q ss_pred HHHHHHHHhH----cCCCcEEEecccc
Q 017695 186 DARGLLKAAI----RDPDPVVFLENEL 208 (367)
Q Consensus 186 e~~~~~~~a~----~~~~Pv~ir~~~~ 208 (367)
++...++.|+ ..++||+|-.+..
T Consensus 164 ~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 164 NATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp THHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred cHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 5555555444 3579999976643
No 51
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=84.99 E-value=1.4 Score=33.46 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=49.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-----CCeEEEEeCCCCCCch-HHHHHHH
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-----TNRLVTVEEGFPQHGV-GAEICAS 312 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-----~~~ivvvEe~~~~GGl-g~~v~~~ 312 (367)
++|+|.+. +....|.+|.+.|+++||..+.+|+.. |.+...+..+. +=..|++.|+...+|+ .+++.+.
T Consensus 4 a~I~vYs~-~~Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~~~~~~el~~~ 78 (92)
T 2lqo_A 4 AALTIYTT-SWCGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAK 78 (92)
T ss_dssp SCEEEEEC-TTCSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEEETTSCEEESCCHHHHHHH
T ss_pred CcEEEEcC-CCCHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEEEeCCEEEeCCCHHHHHHH
Confidence 45777775 566778889999999999999999864 55544333322 2256777776655554 3567777
Q ss_pred HHHh
Q 017695 313 VIEE 316 (367)
Q Consensus 313 l~~~ 316 (367)
|.+.
T Consensus 79 L~el 82 (92)
T 2lqo_A 79 LVKI 82 (92)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7664
No 52
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=79.78 E-value=2.9 Score=30.63 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=42.4
Q ss_pred EEEEEech----hHHHHHHHHHHHHhcCCceEEEEeeecCC-CCHH---HHHHHHhcC------CeEEEEeCCCCCCchH
Q 017695 241 VTITAFSK----IVGLSLKAAEILAKEGISAEVINLRSIRP-LDRS---TINASVRKT------NRLVTVEEGFPQHGVG 306 (367)
Q Consensus 241 i~Iia~G~----~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P-~d~~---~l~~~~~~~------~~ivvvEe~~~~GGlg 306 (367)
++|.+. + ....|.+|.+.|++.|++.+.+|+..... -|.+ .+.+..... =..|+++++...||+-
T Consensus 2 v~iY~~-~~~~~~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d 80 (87)
T 1aba_A 2 FKVYGY-DSNIHKCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFD 80 (87)
T ss_dssp EEEEEC-CTTTSCCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHH
T ss_pred EEEEEe-CCCCCcCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHH
Confidence 455554 4 56788889999999999999999975321 2433 344333322 2467774556678875
Q ss_pred H
Q 017695 307 A 307 (367)
Q Consensus 307 ~ 307 (367)
.
T Consensus 81 ~ 81 (87)
T 1aba_A 81 Q 81 (87)
T ss_dssp H
T ss_pred H
Confidence 4
No 53
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=76.48 E-value=4.5 Score=31.51 Aligned_cols=65 Identities=20% Similarity=0.174 Sum_probs=45.2
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHH---HHHHHh-cCCeEEEEeCCCCCCchHH
Q 017695 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRST---INASVR-KTNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 238 g~di~Iia~G----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~---l~~~~~-~~~~ivvvEe~~~~GGlg~ 307 (367)
..+++|++-| +.+..|.+|.+.|++.|++.+.+|+.. |.+. +.+... .+=..|++... ..||+-.
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~----d~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~ 87 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS----DEEVRQGLKAYSSWPTYPQLYVSGE-LIGGLDI 87 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG----CHHHHHHHHHHHTCCSSCEEEETTE-EEECHHH
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC----CHHHHHHHHHHHCCCCCCEEEECCE-EEecHHH
Confidence 4578999887 577899999999999999999999875 3332 332222 22246667664 4588643
No 54
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=73.82 E-value=3.3 Score=32.03 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=44.8
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-CCeEEEEeCCCCCCchHH
Q 017695 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 238 g~di~Iia~G----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-~~~ivvvEe~~~~GGlg~ 307 (367)
..+++|++.+ .....|.+|.+.|++.|++.+.+|+..- |--.+.+.+.... +=..|++... ..||+-.
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~ 89 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLYIGGE-FFGGCDI 89 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEEETTE-EEECHHH
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEEECCE-EEeCHHH
Confidence 4579999998 4788999999999999999999998641 1111223332222 2245666654 4578654
No 55
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=71.63 E-value=13 Score=38.58 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=51.7
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCch---hHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQHS---HCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH~---~~~~a~~~~iP~~~V~~ 180 (367)
+.++++. .+. ++ .+++-+. .++. .++| ++++.. ++.+. .++++. ..+...+++. ||.++.
T Consensus 173 ~~v~~i~-GDG~l~eG~~~Eal~-~A~~--------~~L~~livI~dnN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 240 (690)
T 3m49_A 173 HYTYAIC-GDGDLMEGVSAEASS-LAAH--------LQLGRLVVLYDSNDISL-DGDLNRSFSESVEDRYKAY-GWQVIR 240 (690)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSBCS-SSBGGGTCCCCHHHHHHHH-TCEEEE
T ss_pred CeEEEEE-CchhhhhccHHHHHH-HHHH--------hCCCeEEEEEECCCeec-ccchhhccchhHHHHHHHc-CCcEEE
Confidence 3455554 443 33 3556653 3443 5776 554443 34321 233321 2233677777 899998
Q ss_pred e---CCHHHHHHHHHHhHc-CCCcEEEec
Q 017695 181 P---YSSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 181 P---~d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
+ .|..++..+++.+.+ .++|++|..
T Consensus 241 v~DG~d~~~l~~Al~~a~~~~~~P~lI~v 269 (690)
T 3m49_A 241 VEDGNDIEAIAKAIEEAKADEKRPTLIEV 269 (690)
T ss_dssp ESCTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred EecCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8 789999999999988 689999853
No 56
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=71.23 E-value=5.5 Score=32.38 Aligned_cols=66 Identities=17% Similarity=0.124 Sum_probs=44.4
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-CCeEEEEeCCCCCCchH
Q 017695 239 KDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVG 306 (367)
Q Consensus 239 ~di~Iia~G----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-~~~ivvvEe~~~~GGlg 306 (367)
.+++|++.| ..+..|.+|.+.|.+.|++.+.+|+.. .|--.+.+.+.... +=..|++... ..||+-
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~-d~~~~~~L~~~~G~~tvP~VfI~G~-~iGG~d 105 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ-NPDIRAELPKYANWPTFPQLWVDGE-LVGGCD 105 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG-CHHHHHHHHHHHTCCSSCEEEETTE-EEESHH
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC-CHHHHHHHHHHHCCCCcCEEEECCE-EEEChH
Confidence 468999998 788899999999999999999999875 12111223332222 2246666654 458874
No 57
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=71.14 E-value=12 Score=38.18 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=24.0
Q ss_pred CcEEE---eeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 175 GLKVL---SPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 175 ~~~V~---~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
|+..+ ...|..++..++++|.+.++|++|-
T Consensus 247 G~~~~g~vdG~d~~~l~~al~~A~~~~gP~lI~ 279 (621)
T 2o1s_A 247 GFNYIGPVDGHDVLGLITTLKNMRDLKGPQFLH 279 (621)
T ss_dssp TCEEEEEEETTCHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCeEeeeeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 45544 4468999999999999889999885
No 58
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=71.10 E-value=7.2 Score=40.75 Aligned_cols=85 Identities=13% Similarity=0.123 Sum_probs=51.6
Q ss_pred eeEEecccccHH-H--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNFS-M--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f~-~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~~ 180 (367)
+.++++. .+.. + .+++-+. .++. .++| ++++.. ++.+. ++.++ ...+...+++. ||.++.
T Consensus 188 ~~vv~i~-GDG~l~eG~~~Eal~-~A~~--------~~L~~livI~dnN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 255 (711)
T 3uk1_A 188 HHTYVFL-GDGCLMEGISHEACS-LAGT--------LKLNKLIALYDDNGISI-DGDVVNWFHDDTPKRFEAY-GWNVIP 255 (711)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHT-TCEEEE
T ss_pred CeEEEEE-CCcchhhccHHHHHH-HHHH--------hCCCcEEEEEECCCccc-ccchhhhcCCCHHHHHHHc-CCcEEE
Confidence 4555554 4433 3 4556653 3443 5787 655544 33321 22222 12334677777 888777
Q ss_pred e---CCHHHHHHHHHHhHcCCCcEEEec
Q 017695 181 P---YSSEDARGLLKAAIRDPDPVVFLE 205 (367)
Q Consensus 181 P---~d~~e~~~~~~~a~~~~~Pv~ir~ 205 (367)
| .|..++..+++.|.+.++|++|..
T Consensus 256 ~vdG~d~~~l~~Al~~A~~~~~P~lI~v 283 (711)
T 3uk1_A 256 NVNGHDVDAIDAAIAKAKRSDKPSLICC 283 (711)
T ss_dssp EEETTCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EeCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 5 489999999999988889998853
No 59
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=69.21 E-value=9.4 Score=38.67 Aligned_cols=110 Identities=14% Similarity=0.041 Sum_probs=62.7
Q ss_pred CCceeec---hhhHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCC
Q 017695 83 PERVLDT---PITEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAA 155 (367)
Q Consensus 83 p~R~i~~---GIaE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~ 155 (367)
|.+|+.. |. =-..+++|.|++++- -++++++. .+. ++..+..+. .+.. .++|++++. .++..
T Consensus 403 ~~~~~~~~~~g~-mG~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~-ta~~--------~~l~~~ivv~NN~~~~ 471 (590)
T 1v5e_A 403 KNMWRTSPLFAT-MGIAIPGGLGAKNTYPDRQVWNII-GDGAFSMTYPDVV-TNVR--------YNMPVINVVFSNTEYA 471 (590)
T ss_dssp TSEEECCCSSCC-TTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHH-HHHH--------TTCCCEEEEEECSSCT
T ss_pred CCeEEcCCCCCc-ccChHHHHHHHHHhCCCCeEEEEE-echHHhchHHHHH-HHHH--------hCCCCEEEEEECCchH
Confidence 6777742 21 134567777877663 45666654 332 233344432 2332 467766654 22221
Q ss_pred --CC-CC--------C-CchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcC---CCcEEEe
Q 017695 156 --AG-VG--------A-QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRD---PDPVVFL 204 (367)
Q Consensus 156 --~g-~G--------~-tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~---~~Pv~ir 204 (367)
.. .. . .|...+..+..+. |+..+...+++|+..+++++++. ++|++|-
T Consensus 472 ~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~gp~lie 534 (590)
T 1v5e_A 472 FIKNKYEDTNKNLFGVDFTDVDYAKIAEAQ-GAKGFTVSRIEDMDRVMAEAVAANKAGHTVVID 534 (590)
T ss_dssp TGGGTTSSSCCSCCCCCCCCCCHHHHHHHT-TSEEEEECBHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCccccCCCCCHHHHHHHc-CCEEEEECCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 11 10 0 1212234555665 77777888999999999999887 8999884
No 60
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=69.15 E-value=11 Score=38.88 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=57.7
Q ss_pred HHHHHHHHhccC------------CeeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCC
Q 017695 96 FTGIGVGAAYYG------------LKPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGV 158 (367)
Q Consensus 96 ~vg~AaGlA~~G------------~~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~ 158 (367)
.++.|.|+|++- -+.+++.. .+. ++ .+++-+. .++. .++| ++++.. ++.+. .
T Consensus 119 gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~-GDG~~~eG~~~Eal~-~A~~--------~~L~~livi~nnN~~~i-~ 187 (632)
T 3l84_A 119 GVANAVGFAMAAKKAQNLLGSDLIDHKIYCLC-GDGDLQEGISYEACS-LAGL--------HKLDNFILIYDSNNISI-E 187 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEE-EHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSEET-T
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCeEEEEE-CCcchhhccHHHHHH-HHHH--------cCCCcEEEEEECCCccc-c
Confidence 455666666642 24455554 443 33 4566653 3443 5776 555543 34321 1
Q ss_pred CCCc---hhHHHHHHhcCCCcEEEeeC---CHHHHHHHHHHhHcCCCcEEEec
Q 017695 159 GAQH---SHCYAAWYASVPGLKVLSPY---SSEDARGLLKAAIRDPDPVVFLE 205 (367)
Q Consensus 159 G~tH---~~~~~a~~~~iP~~~V~~P~---d~~e~~~~~~~a~~~~~Pv~ir~ 205 (367)
++++ ...+...+++. ||.++ +. |..++..+++.|.+.++|++|..
T Consensus 188 ~~~~~~~~~d~~~~~~a~-G~~~~-~vdGhd~~~l~~al~~A~~~~~P~lI~v 238 (632)
T 3l84_A 188 GDVGLAFNENVKMRFEAQ-GFEVL-SINGHDYEEINKALEQAKKSTKPCLIIA 238 (632)
T ss_dssp EEGGGTCCCCHHHHHHHT-TCEEE-EEETTCHHHHHHHHHHHHTCSSCEEEEE
T ss_pred cchhhhcChhHHHHHHHc-CCeEE-EEeeCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 2222 12334677777 88888 44 78999999999988889998853
No 61
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=69.05 E-value=7.4 Score=39.12 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=55.5
Q ss_pred HHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEeC-C-CCC-CC-C-----------CC
Q 017695 97 TGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRGP-N-GAA-AG-V-----------GA 160 (367)
Q Consensus 97 vg~AaGlA~~G~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~-G~~-~g-~-----------G~ 160 (367)
++.|.|++++--++++++. .+.. +..+..+- .+. +.++|++++.- + +.. .+ . +.
T Consensus 422 l~~A~Gaa~a~~~~vv~i~-GDGsf~~~~~eL~-ta~--------~~~lpv~ivv~NN~~~~~~~~~~~~~~~~~~~~~~ 491 (556)
T 3hww_A 422 LSTAAGVQRASGKPTLAIV-GDLSALYDLNALA-LLR--------QVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLM 491 (556)
T ss_dssp HHHHHHHHHHHCCCEEEEE-EHHHHHHTGGGHH-HHT--------TCSSCEEEEEEESCC-----------------CCC
T ss_pred HHHHHHHHhcCCCcEEEEE-ccHHhhhcchhhH-hhc--------ccCCCcEEEEEECCCCCcccCCCCcchhHHHhccC
Confidence 7788888876446666664 3332 22222221 122 35788776642 2 211 11 0 00
Q ss_pred CchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 161 QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 161 tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.|.-.+..+..++ |+.-+...+++|+..+++.+++.++|++|-
T Consensus 492 ~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 534 (556)
T 3hww_A 492 PQNVHFEHAAAMF-ELKYHRPQNWQELETAFADAWRTPTTTVIE 534 (556)
T ss_dssp CCCCCSHHHHHHT-TCEEECCSSHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCCCCHHHHHHHc-CCcEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1111122344444 677888899999999999999999999983
No 62
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=68.90 E-value=8.9 Score=38.61 Aligned_cols=111 Identities=19% Similarity=0.117 Sum_probs=64.4
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEeC-C-CCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-N-GAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~-G~~~ 156 (367)
|.+|+..+- +=-..++.|.|+|++- -++++++. .+. .+..+..+. .+.. .++|++++.- + +...
T Consensus 410 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~-ta~~--------~~l~~~ivv~nN~~~~~ 479 (566)
T 1ozh_A 410 ARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVS-GDGGFLQSSMELE-TAVR--------LKANVLHLIWVDNGYNM 479 (566)
T ss_dssp CSEEECCCTTCCTTCHHHHHHHHHHHSTTSEEEEEE-EHHHHHHHTTHHH-HHHH--------HTCCEEEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCCEEEEE-cChHHhccHHHHH-HHHH--------hCCCcEEEEEECCchhH
Confidence 677876321 1123567778887763 35666654 332 223344432 2332 4778766542 2 2210
Q ss_pred ----------C-CCC-CchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 ----------G-VGA-QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 ----------g-~G~-tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
+ .+. .+.-.+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 538 (566)
T 1ozh_A 480 VAIQEEKKYQRLSGVEFGPMDFKAYAESF-GAKGFAVESAEALEPTLRAAMDVDGPAVVA 538 (566)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHTT-TSEEEECCSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHhcCCCccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 111 1212234566666 778888899999999999999989999884
No 63
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=68.80 E-value=11 Score=37.98 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=65.0
Q ss_pred CCceeechh--hHHHHHHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAAG 157 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~g 157 (367)
|.++++.|. .=-..++.|.|++++.-++++++. .+.. +..+..+. .+.. .++|++++. .+|...+
T Consensus 416 p~~~~~~g~~g~~G~~l~~AiGaala~~~~vv~i~-GDGsf~~~~~el~-ta~~--------~~l~~~ivv~NN~~~~~~ 485 (568)
T 2c31_A 416 PRKRLDSGTWGVMGIGMGYCVAAAAVTGKPVIAVE-GDSAFGFSGMELE-TICR--------YNLPVTVIIMNNGGIYKG 485 (568)
T ss_dssp TTCEEESTTTTCSSCHHHHHHHHHHHHCSCEEEEE-EHHHHHTTGGGHH-HHHH--------TTCCEEEEEEESSBSSCS
T ss_pred CCeEEcCCCCccccccHHHHHHHHhCCCCcEEEEE-cchHhhccHHHHH-HHHH--------hCCCeEEEEEeCchhHHH
Confidence 777876543 122357778887776445666654 3332 22233332 2332 477876664 2342111
Q ss_pred CC------C-----CchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 158 VG------A-----QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 158 ~G------~-----tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.. . .+...+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 486 ~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 542 (568)
T 2c31_A 486 NEADPQPGVISCTRLTRGRYDMMMEAF-GGKGYVANTPAELKAALEEAVASGKPCLIN 542 (568)
T ss_dssp CCCCSBTTBCCTTBCCCCCHHHHHHTT-TCEEEEESSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHhhcCCcccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 11 0 1211233455555 778888899999999999999888999883
No 64
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=68.65 E-value=12 Score=37.45 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=63.0
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCC-
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAA- 155 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~- 155 (367)
|.+|+..+- +=-..+++|.|++++. -+++++.. .+.. +..+..+- .+.+ .++|++++. .++..
T Consensus 396 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~-ta~~--------~~l~~~ivv~nN~~~g~ 465 (549)
T 3eya_A 396 KRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMC-GDGGFSMLMGDFL-SVVQ--------MKLPVKIVVFNNSVLGF 465 (549)
T ss_dssp SCEEECCTTTCCTTCHHHHHHHHHHHSTTSCEEEEE-EHHHHHHTGGGHH-HHHH--------TTCCCEEEEEECSBCCC
T ss_pred CCcEEeCCCCchhhhHHHHHHHHHHhCCCCcEEEEE-ccchhhccHHHHH-HHHH--------hCCCeEEEEEeCCccHH
Confidence 567775211 1113678888888874 46666665 3332 22333332 2333 467765543 22221
Q ss_pred -CC---------CCCC-chhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 156 -AG---------VGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 156 -~g---------~G~t-H~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.. .+.. +...+..+.+++ |+..+...+++|+..+++.+++.++|++|-
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 524 (549)
T 3eya_A 466 VAMEMKAGGYLTDGTELHDTNFARIAEAC-GITGIRVEKASEVDEALQRAFSIDGPVLVD 524 (549)
T ss_dssp C------------CCBCCCCCHHHHHHHT-TSEEEEECSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHhcCCCCcCCcCCCCCHHHHHHHc-CCcEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 10 0111 111233455555 677778899999999999999999999984
No 65
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=67.20 E-value=16 Score=37.56 Aligned_cols=85 Identities=16% Similarity=0.087 Sum_probs=50.4
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~~ 180 (367)
+.++++. .+. ++ .+++-+. .++. .++| ++++.. ++.+. .+++. .......+.+. ||.++.
T Consensus 151 ~~v~~~~-GDG~~~eG~~~Eal~-~A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 218 (651)
T 2e6k_A 151 HYTYVLA-SDGDLMEGVSGEAAS-LAGH--------WGLSKLIVFWDDNRISI-DGPTDLAFTEDVLARYRAY-GWQTLR 218 (651)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECCEET-TEEGGGTCCSCHHHHHHHT-TCEEEE
T ss_pred CEEEEEE-ChhhhchhHHHHHHH-HHHH--------cCCCeEEEEEECCCccc-ccccccccCccHHHHHHhC-CCeEEE
Confidence 4455554 443 33 3566653 3443 5777 666654 33321 12221 12234677777 888883
Q ss_pred eC---CHHHHHHHHHHhHcCCCcEEEec
Q 017695 181 PY---SSEDARGLLKAAIRDPDPVVFLE 205 (367)
Q Consensus 181 P~---d~~e~~~~~~~a~~~~~Pv~ir~ 205 (367)
+. |..++..+++.|.+.++|++|..
T Consensus 219 ~vdG~d~~~l~~al~~a~~~~~P~lI~~ 246 (651)
T 2e6k_A 219 VEDVNDLEALRKAIKLAKLDERPTLIAV 246 (651)
T ss_dssp ESCTTCHHHHHHHHHHHHHSSSCEEEEE
T ss_pred EeCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 43 79999999999988889998853
No 66
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=67.10 E-value=15 Score=37.58 Aligned_cols=30 Identities=13% Similarity=0.246 Sum_probs=24.0
Q ss_pred CcEEE---eeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 175 GLKVL---SPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 175 ~~~V~---~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
|+..+ ...|..++..+++.|.+.++|++|-
T Consensus 252 G~~~~g~vdG~d~~~l~~al~~A~~~~~P~lI~ 284 (629)
T 2o1x_A 252 GVRYVGPVDGHNVQELVWLLERLVDLDGPTILH 284 (629)
T ss_dssp TCEEEEEEESSCHHHHHHHHHHHTTSSSEEEEE
T ss_pred CCeEEeeECCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 45544 4468999999999998888999885
No 67
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=66.73 E-value=19 Score=31.75 Aligned_cols=59 Identities=12% Similarity=0.093 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 252 LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
.+..+++.|++.|.+++++|+.. .+|.+...+.++.++.||+.=.-+ .+++-..+...+
T Consensus 48 L~~~~~~~l~~~g~ev~~~dL~~--~~Dv~~~~~~l~~aD~iv~~~P~y-~~~~p~~lK~~i 106 (218)
T 3rpe_A 48 LTNVAADFLRESGHQVKITTVDQ--GYDIESEIENYLWADTIIYQMPAW-WMGEPWILKKYI 106 (218)
T ss_dssp HHHHHHHHHHHTTCCEEEEEGGG--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHhhCCCEEEEEECCC--ccCHHHHHHHHHhCCEEEEECChH-hccCCHHHHHHH
Confidence 33456667888899999999975 789888888889999877765543 466655555444
No 68
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=66.20 E-value=12 Score=37.64 Aligned_cols=35 Identities=9% Similarity=-0.102 Sum_probs=28.9
Q ss_pred HHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 169 WYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 169 ~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
+..+. |+.-+...+++|+..+++++++.++|++|-
T Consensus 521 ~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 555 (578)
T 3lq1_A 521 AAAFY-DADYHEAKSVDELEEAIDKASYHKGLDIIE 555 (578)
T ss_dssp HHHHT-TCEEEECCSHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHHHc-CCceEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 33444 677788899999999999999999999984
No 69
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=65.19 E-value=14 Score=38.33 Aligned_cols=85 Identities=13% Similarity=0.084 Sum_probs=49.2
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~~ 180 (367)
+.+++.. .+. ++ .+++-+. .++. .++| ++++.. ++.+. ++++. ...+...+++. ||.++-
T Consensus 149 ~~v~~i~-GDG~l~eG~~~Eal~-~A~~--------~~L~~livi~dnN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 216 (663)
T 3kom_A 149 HHTYVFL-GDGCLMEGVSHEACS-LAGT--------LGLNKLVAFWDDNNISI-DGDTKGWFSDNTPERFRAY-GWHVIE 216 (663)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------HTCTTEEEEEEECC------CGGGTCCCCHHHHHHHT-TCEEEE
T ss_pred CeEEEEE-CchhhhhchHHHHHH-HHHH--------hCCCeEEEEEECCCccc-ccchhhhcchhHHHHHHHC-CCeEEE
Confidence 4455554 443 33 3556553 3443 5777 555443 34321 22222 12334677777 888883
Q ss_pred e---CCHHHHHHHHHHhHc-CCCcEEEec
Q 017695 181 P---YSSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 181 P---~d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
+ .|..++..+++.|.+ .++|++|..
T Consensus 217 ~vdG~d~~~l~~al~~A~~~~~~P~lI~~ 245 (663)
T 3kom_A 217 NVDGHDFVAIEKAINEAHSQQQKPTLICC 245 (663)
T ss_dssp EEETTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred EEcCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 378999999999988 589998853
No 70
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=64.86 E-value=12 Score=29.43 Aligned_cols=65 Identities=18% Similarity=0.136 Sum_probs=44.6
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCc-eEEEEeeecCCCCHHH---HHHHHh-cCCeEEEEeCCCCCCchHH
Q 017695 238 GKDVTITAFS----KIVGLSLKAAEILAKEGIS-AEVINLRSIRPLDRST---INASVR-KTNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 238 g~di~Iia~G----~~v~~al~Aa~~L~~~Gi~-v~vi~~~~i~P~d~~~---l~~~~~-~~~~ivvvEe~~~~GGlg~ 307 (367)
..+++|++.+ ..+..|.+|.+.|++.|+. .+.+|+.. |.+. +.+... .+=..|++... ..||+-.
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~----d~~~~~~l~~~tg~~tvP~vfI~g~-~IGG~d~ 92 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD----DPELRQGIKDYSNWPTIPQVYLNGE-FVGGCDI 92 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS----CHHHHHHHHHHHTCCSSCEEEETTE-EEESHHH
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC----CHHHHHHHHHHhCCCCcCeEEECCE-EEeChHH
Confidence 4579999998 4788999999999999994 99999863 4332 222222 22246666664 4588653
No 71
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=64.02 E-value=7.4 Score=29.83 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=44.1
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-CCeEEEEeCCCCCCchH
Q 017695 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVG 306 (367)
Q Consensus 238 g~di~Iia~G----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-~~~ivvvEe~~~~GGlg 306 (367)
..+++|++.| .....|.+|.+.|++.|++...+|+.. .|--.+.+.+.... +=..|+++.. ..||+-
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~-~~~~~~~l~~~~g~~~vP~ifi~g~-~igG~d 85 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE-DEEVRQGLKTFSNWPTYPQLYVRGD-LVGGLD 85 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS-CHHHHHHHHHHHSCCSSCEEECSSS-EEECHH
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC-CHHHHHHHHHHhCCCCCCEEEECCE-EEcCHH
Confidence 4568999998 677889999999999999999999875 11111223332222 2245666554 468864
No 72
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=62.68 E-value=29 Score=35.86 Aligned_cols=62 Identities=16% Similarity=0.234 Sum_probs=40.7
Q ss_pred cccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEE-ee---CCHHHHHHHHHHhHc-CCCcEEEec
Q 017695 142 ISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVL-SP---YSSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 142 ~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~-~P---~d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
.++| ++++.. ++.+. +|++. ...+...+++. ||.++ .- .|..++..+++.|.+ .++|++|..
T Consensus 175 ~~L~~li~i~d~N~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~~vdG~~d~~~l~~Al~~A~~~~~~P~lI~~ 246 (673)
T 1r9j_A 175 LALEKLIVIYDSNYISI-DGSTSLSFTEQCHQKYVAM-GFHVIEVKNGDTDYEGLRKALAEAKATKGKPKMIVQ 246 (673)
T ss_dssp HTCTTEEEEEEECSBCS-SSBGGGTCCCCHHHHHHHT-TCEEEEESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred hCCCcEEEEEECCCCcc-ccchhhccCHhHHHHHHHC-CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 5776 666654 34321 23332 12334677776 89888 44 688999999999987 688998853
No 73
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=62.61 E-value=4.8 Score=40.15 Aligned_cols=111 Identities=19% Similarity=0.169 Sum_probs=62.9
Q ss_pred CCceeech-hhHHHHHHHHHHHhccC-CeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe-CC-CCCC-
Q 017695 83 PERVLDTP-ITEAGFTGIGVGAAYYG-LKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG-PN-GAAA- 156 (367)
Q Consensus 83 p~R~i~~G-IaE~~~vg~AaGlA~~G-~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~-G~~~- 156 (367)
|.+|+..+ -+=-..++.|.|++++- -++++++. .+.. +..++.+.+ ++. .++|++++. .+ +...
T Consensus 392 ~~~~~~~~gg~~G~~l~~A~G~a~a~~~~~vv~~~-GDG~~~~~~~~l~~-a~~--------~~l~~~ivv~nN~~~~~~ 461 (528)
T 1q6z_A 392 PGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAVI-GDGSANYSISALWT-AAQ--------YNIPTIFVIMNNGTYGAL 461 (528)
T ss_dssp SSCEEECTTCCTTSHHHHHHHHHHHCTTSCEEEEE-EHHHHTTTGGGHHH-HHH--------HTCCCEEEEEECSBCHHH
T ss_pred CCcEECCCCccccchHHHHHHHHHhCCCCcEEEEE-CCcHHHhhHHHHHH-HHH--------hCCCeEEEEEeCCcchHh
Confidence 56777532 11224566778887763 35666654 3322 233444332 332 467766654 22 2211
Q ss_pred -C----------CCCC-chhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 -G----------VGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 -g----------~G~t-H~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
. .+.. |...+..+..+. |+..+...+.+|+..+++++++.++|++|-
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 520 (528)
T 1q6z_A 462 RWFAGVLEAENVPGLDVPGIDFRALAKGY-GVQALKADNLEQLKGSLQEALSAKGPVLIE 520 (528)
T ss_dssp HHHHHHHTCCSCCSCBCCCCCHHHHHHHH-TCEEEEESSHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCcEEEE
Confidence 0 0111 212233455555 677778899999999999999989999883
No 74
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=60.95 E-value=17 Score=30.85 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=43.0
Q ss_pred chhHHHHHHHHHH-HHhcCCceEEEEeeecCC----------CCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 247 SKIVGLSLKAAEI-LAKEGISAEVINLRSIRP----------LDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 247 G~~v~~al~Aa~~-L~~~Gi~v~vi~~~~i~P----------~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
|.+-..+..+++. |+++|.+++++|+..+.. =+.+.+.+.+..++.||+.=.-+ .|++...+..++
T Consensus 16 g~t~~la~~i~~~~l~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~y-~~~~p~~lK~~l 92 (197)
T 2vzf_A 16 STTAKLAEYALAHVLARSDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPIY-KASYTGLLKAFL 92 (197)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCcc-CCCCCHHHHHHH
Confidence 3344556666777 888899999999876421 13344556677777766654433 477777777666
No 75
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=60.57 E-value=21 Score=31.89 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhcCCceEEEEeeecCCCC---------HHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 251 GLSLKAAEILAKEGISAEVINLRSIRPLD---------RSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d---------~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
..+..+++.+++.|++++++|+..+ |+. .+.+.+.+...+.||++=.-+ .+++...+..++
T Consensus 52 ~La~~~~~~l~~~g~eve~idL~~~-pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~Y-n~sipa~LKn~i 121 (247)
T 2q62_A 52 LLAEEARRLLEFFGAEVKVFDPSGL-PLPDAAPVSHPKVQELRELSIWSEGQVWVSPER-HGAMTGIMKAQI 121 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCTTC-CCTTSSCTTSHHHHHHHHHHHHCSEEEEEEECS-SSSCCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEEhhcC-CCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCCC-CCCccHHHHHHH
Confidence 4445566778878999999999875 322 455667777888766655533 578888777776
No 76
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=60.53 E-value=21 Score=35.82 Aligned_cols=110 Identities=17% Similarity=0.116 Sum_probs=64.1
Q ss_pred CCceeec---hhhHHHHHHHHHHHhccC---CeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe--CCC
Q 017695 83 PERVLDT---PITEAGFTGIGVGAAYYG---LKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNG 153 (367)
Q Consensus 83 p~R~i~~---GIaE~~~vg~AaGlA~~G---~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G 153 (367)
|.+|+.. |.- -..++.|.|++++- -++++++. .+.. +..+..+.+ +.. .++|++++. .++
T Consensus 409 ~~~~~~~~g~g~~-G~~l~~AiGaa~a~~~~~~~vv~i~-GDG~~~~~~~~L~t-a~~--------~~l~~~ivv~nN~~ 477 (563)
T 2uz1_A 409 PGGFLCHGYLGSM-GVGFGTALGAQVADLEAGRRTILVT-GDGSVGYSIGEFDT-LVR--------KQLPLIVIIMNNQS 477 (563)
T ss_dssp CSEEECCCTTCCT-TTHHHHHHHHHHHHHHHTCEEEEEE-EHHHHGGGTTHHHH-HHH--------HTCCCEEEEEECSB
T ss_pred CCeEECCCCCccc-cChHHHHHHHHHHhhCCCCeEEEEE-ccHHHhCCHHHHHH-HHH--------hCCCeEEEEEeCCc
Confidence 7788872 222 25667888887763 46666654 3322 223333322 332 467765553 222
Q ss_pred CCC---------C----CCCC-chhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 154 AAA---------G----VGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 154 ~~~---------g----~G~t-H~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
... + .+.. |...+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 541 (563)
T 2uz1_A 478 WGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAF-GADGYHVDSVESFSAALAQALAHNRPACIN 541 (563)
T ss_dssp CHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHT-TCEEEEECSHHHHHHHHHHHHHSSSCEEEE
T ss_pred chHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCCEEEE
Confidence 210 0 0111 212234555665 777888899999999999999989999884
No 77
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=60.41 E-value=5 Score=40.86 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=56.4
Q ss_pred HHHHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEeC-C-CCCCCCCCC----------
Q 017695 95 GFTGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRGP-N-GAAAGVGAQ---------- 161 (367)
Q Consensus 95 ~~vg~AaGlA~~G~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~-G~~~g~G~t---------- 161 (367)
..++.|.|+|++--++++++. .+.. +..+..+. .+.. .++|++++.- + |... .+..
T Consensus 459 ~~l~~AiGaala~~~~vv~i~-GDGsf~~~~~eL~-ta~~--------~~lp~~ivv~NN~~~~i-~~~~~~~q~~~~~~ 527 (604)
T 2x7j_A 459 GVVSSAMGVCEGTKAPVTLVI-GDLSFYHDLNGLL-AAKK--------LGIPLTVILVNNDGGGI-FSFLPQASEKTHFE 527 (604)
T ss_dssp SHHHHHHHHHHHHTSCEEEEE-EHHHHHHTGGGGH-HHHH--------HCCCEEEEEEECSSCGG-GGGSGGGSCHHHHH
T ss_pred cHHHHHHHHHhcCCCcEEEEE-ccHHHHhHHHHHH-Hhhh--------cCCCeEEEEEeCCCCcc-cccCCCCccchhhH
Confidence 367788888877446666654 3322 22233322 2332 5788766542 2 3221 0101
Q ss_pred ------chhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 162 ------HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 162 ------H~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
|...+..+..++ |+..+...+++|+..+++++++.++|++|-
T Consensus 528 ~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 575 (604)
T 2x7j_A 528 DLFGTPTGLDFKHAAALY-GGTYSCPASWDEFKTAYAPQADKPGLHLIE 575 (604)
T ss_dssp HHTTCCCCCCTHHHHHHT-TCEEECCSSHHHHHHHCCCCCSSCCEEEEE
T ss_pred hhccCCCCCCHHHHHHHc-CCeEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 100112334444 678888899999999999888888898883
No 78
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=60.32 E-value=29 Score=33.44 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=51.9
Q ss_pred EEEEechhH----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 242 TITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 242 ~Iia~G~~v----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
++|.|++|. ..|...++.|+++|+.+.++++..+..-|...+.+.+.+++.+++-=. +..|++-..+..++.
T Consensus 268 v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGsp-T~~~~~~p~~~~~l~ 343 (410)
T 4dik_A 268 VTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVS-TYEAEIHPLMRFTLL 343 (410)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEEC-CTTSSSCHHHHHHHH
T ss_pred eeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeC-CcCCcCCHHHHHHHH
Confidence 444566554 456667778888999999999998888888888888888887776444 455777666655553
No 79
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=60.09 E-value=14 Score=37.28 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=64.9
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEe-CC-CCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PN-GAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~-G~~~ 156 (367)
|.+|++.|- +=-..+++|.|++++. -++++++. .+. ++..+..+. .++. .++|++++. .+ +...
T Consensus 416 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~-ta~~--------~~l~~~ivv~NN~~~~~ 485 (590)
T 1ybh_A 416 PRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDID-GDGSFIMNVQELA-TIRV--------ENLPVKVLLLNNQHLGM 485 (590)
T ss_dssp TTSEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHTTTHHH-HHHH--------TTCCEEEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCcEEEEE-ccchhhccHHHHH-HHHH--------hCCCcEEEEEECCcchH
Confidence 788998753 2233678888888764 36666664 332 223344332 2332 578866553 22 2210
Q ss_pred ---------C-------CCCCc-----hhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 ---------G-------VGAQH-----SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 ---------g-------~G~tH-----~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
+ .+..| ...+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 553 (590)
T 1ybh_A 486 VMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAAC-GIPAARVTKKADLREAIQTMLDTPGPYLLD 553 (590)
T ss_dssp HHHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHT-TCCEEEECBHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 01100 11233455554 555667789999999999999989999884
No 80
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=59.30 E-value=13 Score=37.77 Aligned_cols=111 Identities=11% Similarity=0.093 Sum_probs=65.0
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEeC-C-CCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-N-GAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~-G~~~ 156 (367)
|.+|+..+. +=-..+++|.|++++. -++++++. .+. ++..+..+- .++. .++|++++.- + +...
T Consensus 410 ~~~~~~~~~~g~~G~~l~~A~Gaala~~~~~vv~~~-GDG~~~~~~~~l~-~a~~--------~~lp~~~vv~nN~~~~~ 479 (603)
T 4feg_A 410 SNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLA-GDGGASMTMQDLA-TQVQ--------YHLPVINVVFTNCQYGF 479 (603)
T ss_dssp TCEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHH-HHHH--------TTCCCEEEEEECSBCHH
T ss_pred CCceecCcccccccchhHHHhhHHHhCCCCcEEEEe-ccHHHhhhHHHHH-HHHH--------HCcCeEEEEEECCchHH
Confidence 667776432 1123677888888875 46666654 332 233444442 2332 5788766542 2 2221
Q ss_pred ------------CCCCC-chhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhH--cCCCcEEEe
Q 017695 157 ------------GVGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAI--RDPDPVVFL 204 (367)
Q Consensus 157 ------------g~G~t-H~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~--~~~~Pv~ir 204 (367)
..+.. +...+..+.... |+..+.+.++.|+..+++.+. +.++|++|-
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~~~gP~lIe 541 (603)
T 4feg_A 480 IKDEQEDTNQNDFIGVEFNDIDFSKIADGV-HMQAFRVNKIEQLPDVFEQAKAIAQHEPVLID 541 (603)
T ss_dssp HHHHHHHHCSSCCCSSBCCCCCHHHHHHHT-TCEEEEECBGGGHHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHhcCCCcccCcCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 11111 212233455544 667778889999999999999 889999983
No 81
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=59.20 E-value=11 Score=37.82 Aligned_cols=111 Identities=10% Similarity=0.028 Sum_probs=60.6
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe-C-CCCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG-P-NGAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~-~G~~~ 156 (367)
|.+|+..+- +=-..+++|.|++++. -++++++. .+.. +..+..+.+ +.. .++|++++. . ++...
T Consensus 398 ~~~~~~~~~~g~mG~~l~~A~G~a~a~~~~~vv~~~-GDG~~~~~~~el~t-a~~--------~~l~~~ivv~nN~~~~~ 467 (552)
T 1ovm_A 398 DVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLT-GDGAAQLTIQELGS-MLR--------DKQHPIILVLNNEGYTV 467 (552)
T ss_dssp SCEEECCTTTCCTTHHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHTTHHHH-HHH--------TTCCCEEEEEESSSCHH
T ss_pred CCeEEechhhHhhhhHHHHHHHHHHhCCCCcEEEEE-CchHHHhHHHHHHH-HHH--------hCCCCEEEEEECCCCeE
Confidence 456665221 2224567778877763 35666654 3332 233444332 332 477766553 2 23211
Q ss_pred --C-CCC------CchhHHHHHHhcCCCc----EEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 --G-VGA------QHSHCYAAWYASVPGL----KVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 --g-~G~------tH~~~~~a~~~~iP~~----~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
. .|. .|...+..+.... |+ ..+...+.+|+..+++++++.++|++|-
T Consensus 468 ~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~lie 527 (552)
T 1ovm_A 468 ERAIHGAEQRYNDIALWNWTHIPQAL-SLDPQSECWRVSEAEQLADVLEKVAHHERLSLIE 527 (552)
T ss_dssp HHHHSCTTCGGGCCCCCCGGGSTTTS-CSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEeeccCCCCcccCCCCCHHHHHHHh-CCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 011 1111122344444 66 7778889999999999999888998873
No 82
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=59.15 E-value=12 Score=27.67 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=40.9
Q ss_pred cEEEEEechhHHHH------HHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHh--c-CCeEEEEeCCCCCCchHHHHH
Q 017695 240 DVTITAFSKIVGLS------LKAAEILAKEGISAEVINLRSIRPLDRSTINASVR--K-TNRLVTVEEGFPQHGVGAEIC 310 (367)
Q Consensus 240 di~Iia~G~~v~~a------l~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~--~-~~~ivvvEe~~~~GGlg~~v~ 310 (367)
+++|+++- ....+ .+|.+.|++.|+..+.+|+..- |-..+.+.+... . +=..|++++.. .||+-. +.
T Consensus 3 ~v~ly~~~-~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~-~~~~~~l~~~~g~~~~~vP~ifi~g~~-igG~d~-l~ 78 (93)
T 1t1v_A 3 GLRVYSTS-VTGSREIKSQQSEVTRILDGKRIQYQLVDISQD-NALRDEMRTLAGNPKATPPQIVNGNHY-CGDYEL-FV 78 (93)
T ss_dssp CEEEEECS-SCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC-HHHHHHHHHHTTCTTCCSCEEEETTEE-EEEHHH-HH
T ss_pred CEEEEEcC-CCCCchhhHHHHHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhCCCCCCCCEEEECCEE-EeCHHH-HH
Confidence 46666653 33344 7888889999999999999742 222233433332 1 22567777654 588644 44
Q ss_pred HH
Q 017695 311 AS 312 (367)
Q Consensus 311 ~~ 312 (367)
+.
T Consensus 79 ~l 80 (93)
T 1t1v_A 79 EA 80 (93)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 83
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=58.76 E-value=29 Score=35.84 Aligned_cols=85 Identities=13% Similarity=0.088 Sum_probs=50.0
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccc-cEEEEeC-CCCCCCCCCC---chhHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISV-PIVFRGP-NGAAAGVGAQ---HSHCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~-pvv~~~~-~G~~~g~G~t---H~~~~~a~~~~iP~~~V~~ 180 (367)
+.++++. .+. ++ ..++-+.. ++. .++ +++++.. ++.+. .+++ ........+.+. ||.++.
T Consensus 160 ~~v~~i~-GDG~~~eG~~~Eal~~-A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 227 (675)
T 1itz_A 160 HYTYVIL-GDGCQMEGIANEACSL-AGH--------WGLGKLIAFYDDNHISI-DGDTEIAFTEDVSTRFEAL-GWHTIW 227 (675)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEET-TEEGGGTCCSCHHHHHHHT-TCEEEE
T ss_pred CEEEEEE-CHhHhchhHHHHHHHH-HHH--------hCCCcEEEEEECCCccC-CCChhhhcChhHHHHHHhC-CCEEEE
Confidence 3455554 443 33 35666543 443 476 5666654 33221 1222 112334677777 898884
Q ss_pred e-C---CHHHHHHHHHHhHc-CCCcEEEec
Q 017695 181 P-Y---SSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 181 P-~---d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
+ . |..++..+++.|.+ .++|++|..
T Consensus 228 ~vdG~~d~~~l~~al~~a~~~~~~P~lI~~ 257 (675)
T 1itz_A 228 VKNGNTGYDDIRAAIKEAKAVTDKPTLIKV 257 (675)
T ss_dssp ESCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred EecCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 4 3 78899999999987 588998853
No 84
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=58.45 E-value=17 Score=28.57 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcC
Q 017695 248 KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (367)
Q Consensus 248 ~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~ 290 (367)
+.+..|.+|.+.|+++|+..+++|+.. .|.+.+.+.+.+++.
T Consensus 8 ~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 8 PSCTSCRKARAWLNRHDVVFQEHNIMT-SPLSRDELLKILSYT 49 (120)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEeccc-CCCcHHHHHHHHhhc
Confidence 456788999999999999999999875 689999988887754
No 85
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=58.09 E-value=16 Score=28.82 Aligned_cols=43 Identities=14% Similarity=0.161 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 248 KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 248 ~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
..+..|.+|.+.|+++|+..+.+|+.. .|.+.+.|.+.+++.+
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 53 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKK-NPPAASLIRNWLENSG 53 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTT-SCCCHHHHHHHHHHSC
T ss_pred CCChHHHHHHHHHHHcCCceEEEEecc-CchhHHHHHHHHHHcC
Confidence 456789999999999999999999975 7999999988887764
No 86
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=57.12 E-value=72 Score=25.38 Aligned_cols=112 Identities=8% Similarity=0.048 Sum_probs=65.2
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCceEEEEeeecCCCCH--HHHHHHHhcC---C-eEEEEeCCCCCCchHHHHHHH
Q 017695 240 DVTITAFSK-IVGLSLKAAEILAKEGISAEVINLRSIRPLDR--STINASVRKT---N-RLVTVEEGFPQHGVGAEICAS 312 (367)
Q Consensus 240 di~Iia~G~-~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~--~~l~~~~~~~---~-~ivvvEe~~~~GGlg~~v~~~ 312 (367)
.++|++.|. .+....++++.+-.+ -.+..+|++-=...+. +.+.+.+++. + .++.+|- |.... ++..
T Consensus 6 giiivsHG~~~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~d~~~GVLiL~Dm----GSp~n-~a~~ 79 (130)
T 3gx1_A 6 EVIVMMHGRSTATSMVETVQELLSI-ESGIALDMPLTVEVKAMYEKLKQTVVKLNPVKGVLILSDM----GSLTS-FGNI 79 (130)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSCCTTCEEEEECS----GGGGT-HHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHHHcCc-cCEEEEEecCCCCHHHHHHHHHHHHHhhCCCCCEEEEEeC----CCHHH-HHHH
Confidence 488999999 888999999987765 5777777653222211 3455556553 2 3555555 44333 3444
Q ss_pred HHHhccCCCCCCeEEEecCCCCCCCHHHH-HHHhCCCHHHHHHHHHHHHhhh
Q 017695 313 VIEESFGYLDAPVERIAGADVPMPYAANL-ERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 313 l~~~~~~~~~~~v~~ig~~d~~~~~~~~l-~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
+.+.. ..++..+...+.+.-. +.. .....-+-++|++. ++++.++
T Consensus 80 l~~~~----~~~v~vI~gvnlpmll-ea~~~~~~~~~l~el~~~-~~~~~~~ 125 (130)
T 3gx1_A 80 LTEEL----GIRTKTVTMVSTPVVL-EAMRKASLGRGLEDIYQS-CEQLFEN 125 (130)
T ss_dssp HHHHH----CCCEEEECSCCHHHHH-HHHHHHHTTCCHHHHHHH-HHHHHHH
T ss_pred HHHhc----CCCEEEEeCCCHHHHH-HHHHHhhcCCCHHHHHHH-HHHHHHH
Confidence 44331 2356666665422111 111 12233489999999 8888765
No 87
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=56.42 E-value=16 Score=28.86 Aligned_cols=46 Identities=11% Similarity=0.100 Sum_probs=30.7
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeC
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
+|++-..|...++.|++.|++++++|+.... .+ .+.+++.|++.=.
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~~---~~----~l~~~d~iiig~p 54 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVSDVN---ID----ELLNEDILILGCS 54 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGGGCC---HH----HHTTCSEEEEEEC
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhhhCC---HH----HHhhCCEEEEEcC
Confidence 4556666667777788889999999887653 22 2446676665543
No 88
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=56.19 E-value=15 Score=36.86 Aligned_cols=111 Identities=19% Similarity=0.204 Sum_probs=63.9
Q ss_pred CCceeechh--hHHHHHHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAAG 157 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~g 157 (367)
|.++++.|. .=-..++.|.|++++.-++++++. .+.. +..+..+ ..+.. .++|++++. .+|...+
T Consensus 411 p~~~~~~g~~g~~G~~l~~AiGaa~a~~~~vv~i~-GDGsf~~~~~el-~ta~~--------~~l~~~ivv~NN~~~~~~ 480 (564)
T 2q28_A 411 PRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIE-GDSAFGFSGMEI-ETICR--------YNLPVTIVIFNNGGIYRG 480 (564)
T ss_dssp SSCEEESTTTTCTTCHHHHHHHHHHHHCSCEEEEE-EHHHHHTTGGGH-HHHHH--------TTCCEEEEEEECSBSSCS
T ss_pred CCeEecCCCCCcccchHHHHHHHhhcCCCcEEEEE-cchHhhccHHHH-HHHHH--------hCCCeEEEEEeCchhHHH
Confidence 778877543 122357788888877445666654 3322 2223333 22332 577876664 2342111
Q ss_pred C-------C---C---CchhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 158 V-------G---A---QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 158 ~-------G---~---tH~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
. + . .|...+..+..++ |+..+...+++|+..+++++++.++|++|-
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 539 (564)
T 2q28_A 481 DGVDLSGAGAPSPTDLLHHARYDKLMDAF-RGVGYNVTTTDELRHALTTGIQSRKPTIIN 539 (564)
T ss_dssp CCCCTTSSCCCCTTBCCTTCCGGGGGGGG-TCEEEEECSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHhccCCccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1 1 0 0111122344444 677788899999999999999888999883
No 89
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=56.18 E-value=27 Score=30.61 Aligned_cols=67 Identities=9% Similarity=0.075 Sum_probs=45.1
Q ss_pred chhHHHHHHHHHHHHhc-CCceEEEEeeecCC---------------------CCHHHHHHHHhcCCeEEEEeCCCCCCc
Q 017695 247 SKIVGLSLKAAEILAKE-GISAEVINLRSIRP---------------------LDRSTINASVRKTNRLVTVEEGFPQHG 304 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~-Gi~v~vi~~~~i~P---------------------~d~~~l~~~~~~~~~ivvvEe~~~~GG 304 (367)
|.+...+..+++.|++. |.+++++|+..+.+ -|.+.+.+.+..++.||+.=.- ..++
T Consensus 15 s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP~-y~~~ 93 (242)
T 1sqs_A 15 SKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPV-YLQN 93 (242)
T ss_dssp CHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEEE-CSSS
T ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEccc-cccC
Confidence 33445555667788887 99999999875421 2445566677788877665553 3577
Q ss_pred hHHHHHHHHH
Q 017695 305 VGAEICASVI 314 (367)
Q Consensus 305 lg~~v~~~l~ 314 (367)
+...+..++-
T Consensus 94 ~p~~lK~~iD 103 (242)
T 1sqs_A 94 VSVDTKNFIE 103 (242)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 7777777663
No 90
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=56.06 E-value=17 Score=28.52 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=44.0
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhcCCc---eEEEEeeecCCCCHHHHHHHHh-----cCCeEEEEeCCCCCCch
Q 017695 238 GKDVTITAFSK----IVGLSLKAAEILAKEGIS---AEVINLRSIRPLDRSTINASVR-----KTNRLVTVEEGFPQHGV 305 (367)
Q Consensus 238 g~di~Iia~G~----~v~~al~Aa~~L~~~Gi~---v~vi~~~~i~P~d~~~l~~~~~-----~~~~ivvvEe~~~~GGl 305 (367)
..+++|++.++ .+..|.+|.+.|++.|+. ...+|+.. |.+ +.+.++ .+=..|++... ..||+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~----~~~-~~~~l~~~sg~~tvP~vfI~g~-~iGG~ 88 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLE----DPE-LREGIKEFSEWPTIPQLYVNKE-FIGGC 88 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTT----CHH-HHHHHHHHHTCCSSCEEEETTE-EEESH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecC----CHH-HHHHHHHHhCCCCCCeEEECCE-EEecH
Confidence 46799999984 788999999999999998 88888753 333 222222 22245666654 45886
Q ss_pred HH
Q 017695 306 GA 307 (367)
Q Consensus 306 g~ 307 (367)
..
T Consensus 89 d~ 90 (121)
T 3gx8_A 89 DV 90 (121)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 91
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=56.02 E-value=23 Score=29.71 Aligned_cols=67 Identities=7% Similarity=0.036 Sum_probs=42.3
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHH-------------HHHHHHhcCCeEEEEeCCCCCCchHHHHHHH
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS-------------TINASVRKTNRLVTVEEGFPQHGVGAEICAS 312 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~-------------~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~ 312 (367)
+|.+-..|...++.|++.|++++++++... +.+.- ...+.+.+++.||+.=.-+ .|++...+..+
T Consensus 16 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk~~ 93 (200)
T 2a5l_A 16 HGATAEMARQIARGVEQGGFEARVRTVPAV-STECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR-FGNMASPLKYF 93 (200)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEBCCCE-EC-------------CCBCCHHHHHTCSEEEEEEECB-TTBCCHHHHHH
T ss_pred CChHHHHHHHHHHHHhhCCCEEEEEEhhhc-cchhhhhccccccccCchhhHHHHHHCCEEEEEcChh-ccCccHHHHHH
Confidence 355556666777788888999999998875 21110 1134456677766654433 47777777776
Q ss_pred HH
Q 017695 313 VI 314 (367)
Q Consensus 313 l~ 314 (367)
+.
T Consensus 94 ld 95 (200)
T 2a5l_A 94 LD 95 (200)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 92
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=55.73 E-value=74 Score=25.08 Aligned_cols=104 Identities=6% Similarity=-0.123 Sum_probs=57.0
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHHhcc
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIEESF 318 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~~~~ 318 (367)
-.++|++.|.......+.+ ++.|+ ++.. ..++.+.+.+..+..+. ++.-.. .-|++-.+.++++.
T Consensus 33 ~~l~i~G~g~~~~~~~~~~---~~~~~-----~v~~-g~~~~~~~~~~~~~adv-~v~ps~--~e~~~~~~~Eama~--- 97 (166)
T 3qhp_A 33 IVLLLKGKGPDEKKIKLLA---QKLGV-----KAEF-GFVNSNELLEILKTCTL-YVHAAN--VESEAIACLEAISV--- 97 (166)
T ss_dssp EEEEEECCSTTHHHHHHHH---HHHTC-----EEEC-CCCCHHHHHHHHTTCSE-EEECCC--SCCCCHHHHHHHHT---
T ss_pred eEEEEEeCCccHHHHHHHH---HHcCC-----eEEE-eecCHHHHHHHHHhCCE-EEECCc--ccCccHHHHHHHhc---
Confidence 3466666676654444433 33355 3334 56678888888888874 444332 35677778888752
Q ss_pred CCCCC-CeEE---EecCCCCCCCHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 319 GYLDA-PVER---IAGADVPMPYAANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 319 ~~~~~-~v~~---ig~~d~~~~~~~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
.. |+.. .+........+..+ ...-|+++++++ +.+++.+
T Consensus 98 ---G~vPvi~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~-i~~l~~~ 140 (166)
T 3qhp_A 98 ---GIVPVIANSPLSATRQFALDERSL--FEPNNAKDLSAK-IDWWLEN 140 (166)
T ss_dssp ---TCCEEEECCTTCGGGGGCSSGGGE--ECTTCHHHHHHH-HHHHHHC
T ss_pred ---CCCcEEeeCCCCchhhhccCCceE--EcCCCHHHHHHH-HHHHHhC
Confidence 33 5544 11111122222111 111378888888 8887754
No 93
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=55.48 E-value=16 Score=28.72 Aligned_cols=49 Identities=24% Similarity=0.255 Sum_probs=39.4
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
++|.+. ..+..|.+|.+.|+++|+..+++|+.. .|.+.+.+.+.+++.+
T Consensus 7 i~iY~~-~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 7 VTIYGI-KNCDTMKKARIWLEDHGIDYTFHDYKK-EGLDAETLDRFLKTVP 55 (120)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHHTCCEEEEEHHH-HCCCHHHHHHHHHHSC
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCcEEEEeeeC-CCCCHHHHHHHHHHcC
Confidence 556554 455788999999999999999999874 5888898888877665
No 94
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=55.45 E-value=83 Score=25.58 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=31.9
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEE
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTV 296 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvv 296 (367)
+|++-..|...++.|++.|+++.++|+... .|.+.+...+.+++.||+.
T Consensus 15 ~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~d~ii~G 63 (159)
T 3fni_A 15 YGYSDRLAQAIINGITKTGVGVDVVDLGAA--VDLQELRELVGRCTGLVIG 63 (159)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEEESSSC--CCHHHHHHHHHTEEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEECcCc--CCHHHHHHHHHhCCEEEEE
Confidence 345555666667777788999998877642 1556565556667666654
No 95
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=54.55 E-value=13 Score=28.97 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=38.7
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
++|.+. +.+..|.+|.+.|+++|+..+++|+.. .|++.+.+.+.+++.+
T Consensus 2 i~iY~~-~~C~~C~kak~~L~~~gi~~~~~di~~-~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 2 YVLYGI-KACDTMKKARTWLDEHKVAYDFHDYKA-VGIDREHLRRWCAEHG 50 (114)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHTTCCEEEEEHHH-HCCCHHHHHHHHHHHC
T ss_pred EEEEEC-CCChHHHHHHHHHHHCCCceEEEeecC-CCCCHHHHHHHHHhCC
Confidence 445443 566889999999999999999999974 6888898887776554
No 96
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=54.47 E-value=28 Score=35.51 Aligned_cols=97 Identities=16% Similarity=0.087 Sum_probs=51.7
Q ss_pred HHHHHHHHhccC------CeeEEecccccHHH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCC--CCCCCch
Q 017695 96 FTGIGVGAAYYG------LKPVVEFMTFNFSM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAA--GVGAQHS 163 (367)
Q Consensus 96 ~vg~AaGlA~~G------~~p~~~~~~~~f~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~--g~G~tH~ 163 (367)
.++.|.|+|++. -+.+++...-.-++ .+++-+. .++. .++| ++++.. ++.+. .....+.
T Consensus 126 gl~~A~G~AlA~~~~~~~~~~vv~v~GDG~~~eG~~~Eal~-~A~~--------~~l~~livi~nnN~~~i~~~~~~~~~ 196 (616)
T 3mos_A 126 GLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMA-FASI--------YKLDNLVAILDINRLGQSDPAPLQHQ 196 (616)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCEEEEEETGGGGSHHHHHHHH-HHHH--------TTCTTEEEEEEECSBCSSSBCTTTTC
T ss_pred ccHHHHHHHHHHHHhCCCCCEEEEEECccccccCcHHHHHH-HHHH--------cCCCcEEEEEECCCCCCcCCcccccC
Confidence 456666766652 14555554322233 5566653 3443 4776 444433 33221 1112222
Q ss_pred hHH-HHHHhcCCCcEEEee--CCHHHHHHHHHHhHcCCCcEEEe
Q 017695 164 HCY-AAWYASVPGLKVLSP--YSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 164 ~~~-~a~~~~iP~~~V~~P--~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
..+ ...++++ ||.++.- .|..++..+++.+ .++|++|-
T Consensus 197 ~~~~~~~~~a~-G~~~~~VdG~d~~~l~~al~~~--~~~P~lI~ 237 (616)
T 3mos_A 197 MDIYQKRCEAF-GWHAIIVDGHSVEELCKAFGQA--KHQPTAII 237 (616)
T ss_dssp HHHHHHHHHHT-TCEEEEEETTCHHHHHHHHHSC--CSSCEEEE
T ss_pred hHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHhc--CCCCEEEE
Confidence 233 3677777 7887733 3778888888655 57899885
No 97
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=52.69 E-value=16 Score=36.66 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.0
Q ss_pred EEEeeCCHHHHHHHHHHhHcC-CCcEEEe
Q 017695 177 KVLSPYSSEDARGLLKAAIRD-PDPVVFL 204 (367)
Q Consensus 177 ~V~~P~d~~e~~~~~~~a~~~-~~Pv~ir 204 (367)
..+...+.+|+..+++++++. ++|++|-
T Consensus 508 ~~~~v~~~~el~~al~~a~~~~~gp~lie 536 (568)
T 2wvg_A 508 KGLKAKTGGELAEAIKVALANTDGPTLIE 536 (568)
T ss_dssp EEEEESBHHHHHHHHHHHHHCCSSCEEEE
T ss_pred ceEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 566678999999999999987 8999883
No 98
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=52.24 E-value=15 Score=29.06 Aligned_cols=49 Identities=10% Similarity=-0.013 Sum_probs=39.0
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
++|.+ -..+..|.+|.+.|+++|+..+.+|+.. .|.+.+.|.+.+++.+
T Consensus 6 i~iY~-~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 54 (120)
T 3gkx_A 6 TLFLQ-YPACSTCQKAKKWLIENNIEYTNRLIVD-DNPTVEELKAWIPLSG 54 (120)
T ss_dssp CEEEE-CTTCHHHHHHHHHHHHTTCCCEEEETTT-TCCCHHHHHHHHHHHT
T ss_pred EEEEE-CCCChHHHHHHHHHHHcCCceEEEeccc-CcCCHHHHHHHHHHcC
Confidence 34443 3566789999999999999999999975 6899998888777554
No 99
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=51.95 E-value=28 Score=29.83 Aligned_cols=59 Identities=10% Similarity=0.028 Sum_probs=43.3
Q ss_pred HHHHHHHhcCCceEEEEeeecCC---CCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 255 KAAEILAKEGISAEVINLRSIRP---LDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 255 ~Aa~~L~~~Gi~v~vi~~~~i~P---~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
..++.+++.|.+++++|+....| .|.+.+.+.+..++.||+.=.-+ .+++-..+...+-
T Consensus 21 ~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y-~~~~pa~lK~~iD 82 (192)
T 3f2v_A 21 HWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIY-WFNCPPLLKQWLD 82 (192)
T ss_dssp HHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECB-TTBCCHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChh-hcCCCHHHHHHHH
Confidence 34456677799999999998765 56777778888888877765543 5777777776663
No 100
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=51.69 E-value=19 Score=34.37 Aligned_cols=61 Identities=20% Similarity=0.207 Sum_probs=36.0
Q ss_pred ccccEEEEeC-CCCCCCCCCCch---hHH-HHHHh--cCCCcEEEeeCCHHHHHHHHHHhHc----CCCcEEEe
Q 017695 142 ISVPIVFRGP-NGAAAGVGAQHS---HCY-AAWYA--SVPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFL 204 (367)
Q Consensus 142 ~~~pvv~~~~-~G~~~g~G~tH~---~~~-~a~~~--~iP~~~V~~P~d~~e~~~~~~~a~~----~~~Pv~ir 204 (367)
.++|+++++. ++... .++++. ..+ ..... .+|++.| .-.|+.++..+++.|++ .++|++|-
T Consensus 191 ~~lpvi~vv~NN~~gi-~~~~~~~~~~~d~~~~a~a~G~~~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe 262 (368)
T 1w85_A 191 FKAPAIFVVQNNRFAI-STPVEKQTVAKTLAQKAVAAGIPGIQV-DGMDPLAVYAAVKAARERAINGEGPTLIE 262 (368)
T ss_dssp TTCCEEEEEEECSEET-TEEGGGTCSCSCSGGGGGGTTCCEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred HCcCEEEEEEcCCccc-eeccccccCCCCHHHHHHHCCCCEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 5889988864 33211 111111 111 12333 3565543 44589999999999986 57899984
No 101
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=51.50 E-value=13 Score=37.43 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=24.4
Q ss_pred EEEeeCCHHHHHHHHHHhHcC-CCcEEEe
Q 017695 177 KVLSPYSSEDARGLLKAAIRD-PDPVVFL 204 (367)
Q Consensus 177 ~V~~P~d~~e~~~~~~~a~~~-~~Pv~ir 204 (367)
..+...+..|+..+++++++. ++|++|-
T Consensus 500 ~~~~v~~~~el~~al~~a~~~~~gp~lie 528 (566)
T 2vbi_A 500 LGLKATTPKELTEAIARAKANTRGPTLIE 528 (566)
T ss_dssp EEEEECSHHHHHHHHHHHHHCCSSCEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 666778999999999999987 8999883
No 102
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=51.34 E-value=39 Score=28.90 Aligned_cols=59 Identities=14% Similarity=0.088 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 252 LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
.+..+++.+++.|.+++++|+.. +.|.+.+.+.+..++.||+.=.-+ .+++-..+...+
T Consensus 35 l~~~~~~~~~~~g~~v~~~dL~~--~~d~~~~~~~l~~AD~iV~~~P~y-~~s~pa~LK~~i 93 (204)
T 2amj_A 35 LTEVADGTLRDLGHDVRIVRADS--DYDVKAEVQNFLWADVVIWQMPGW-WMGAPWTVKKYI 93 (204)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSS--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEeCCc--cccHHHHHHHHHhCCEEEEECCcc-ccCCCHHHHHHH
Confidence 33445666777799999999874 678888888899999876665544 467777666655
No 103
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=50.96 E-value=11 Score=30.86 Aligned_cols=48 Identities=19% Similarity=0.282 Sum_probs=37.9
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~ 290 (367)
++|.+ -..+..|.+|.+.|+++|+..+.+|+.. .|.+.+.+.+.+++.
T Consensus 4 itiY~-~p~C~~crkak~~L~~~gi~~~~idi~~-~~~~~~eL~~~~~~~ 51 (141)
T 1s3c_A 4 ITIYH-NPASGTSRNTLEMIRNSGTEPTIILYLE-NPPSRDELVKLIADM 51 (141)
T ss_dssp CEEEC-CTTCHHHHHHHHHHHHTTCCCEEECTTT-SCCCHHHHHHHHHHH
T ss_pred EEEEE-CCCChHHHHHHHHHHHcCCCEEEEECCC-CCccHHHHHHHhccc
Confidence 44443 2567889999999999999999999975 688898887776654
No 104
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=50.09 E-value=58 Score=32.55 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=63.3
Q ss_pred CCceeech-h-hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEe-CC-CCCC
Q 017695 83 PERVLDTP-I-TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PN-GAAA 156 (367)
Q Consensus 83 p~R~i~~G-I-aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~-G~~~ 156 (367)
|.+|+..+ . +=-..++.|.|++++. -+++++.. .+. ++..+..+. .+.. .++|++++. .+ +...
T Consensus 426 ~~~~~~~~g~g~mG~~l~~AiGaa~a~~~~~vv~i~-GDG~~~~~~~~L~-~a~~--------~~l~~~ivv~NN~~~~~ 495 (573)
T 2iht_A 426 PFGFLTSAGCSSFGYGIPAAIGAQMARPDQPTFLIA-GDGGFHSNSSDLE-TIAR--------LNLPIVTVVVNNDTNGL 495 (573)
T ss_dssp TTSEECCSSSCCTTCHHHHHHHHHHHSTTSCEEEEE-EHHHHHHTGGGHH-HHHH--------HTCCCEEEEEECSBCHH
T ss_pred CCeEEcCCCCcccccHHHHHHHHHHhCCCCcEEEEE-ccHHHHhHHHHHH-HHHH--------hCCCeEEEEEECCcchh
Confidence 67788642 1 1123567888888763 35666654 332 223333332 2332 467765543 22 2210
Q ss_pred -C----------CC--CCch-hHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 -G----------VG--AQHS-HCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 -g----------~G--~tH~-~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
+ .+ ..-. -.+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 556 (573)
T 2iht_A 496 IELYQNIGHHRSHDPAVKFGGVDFVALAEAN-GVDATRATNREELLAALRKGAELGRPFLIE 556 (573)
T ss_dssp HHHHHHHHHSSCCGGGTBCCCCCHHHHHHHT-TCEEEECCSHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHhcCCCcCccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 00 0000 1233555555 777888899999999999999989999884
No 105
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=49.08 E-value=28 Score=31.83 Aligned_cols=74 Identities=11% Similarity=-0.031 Sum_probs=47.7
Q ss_pred CcEEEEEec-----hhHHHHHHHHHHHHhcCCceEEEEeeecCCC-------C--HHHHHHHHhcCCeEEEEeCCCCCCc
Q 017695 239 KDVTITAFS-----KIVGLSLKAAEILAKEGISAEVINLRSIRPL-------D--RSTINASVRKTNRLVTVEEGFPQHG 304 (367)
Q Consensus 239 ~di~Iia~G-----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~-------d--~~~l~~~~~~~~~ivvvEe~~~~GG 304 (367)
.+|++|... ..-..+..+++.+++.|.+++++|+.-+... + .+.+.+.+...+.||++=.-+ .++
T Consensus 59 mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~Y-n~s 137 (279)
T 2fzv_A 59 VRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPER-HGQ 137 (279)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEEE-TTE
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCcc-ccC
Confidence 355555432 2334455567778888999999999876321 2 344666777788766655433 577
Q ss_pred hHHHHHHHH
Q 017695 305 VGAEICASV 313 (367)
Q Consensus 305 lg~~v~~~l 313 (367)
+...+..++
T Consensus 138 ipg~LKn~I 146 (279)
T 2fzv_A 138 ITSVMKAQI 146 (279)
T ss_dssp ECHHHHHHH
T ss_pred cCHHHHHHH
Confidence 877777776
No 106
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=48.97 E-value=36 Score=27.05 Aligned_cols=48 Identities=29% Similarity=0.226 Sum_probs=38.2
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~ 290 (367)
++|.+ -+.+..|.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.
T Consensus 3 i~lY~-~~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~el~~~l~~~ 50 (132)
T 1z3e_A 3 VTLYT-SPSCTSCRKARAWLEEHEIPFVERNIFS-EPLSIDEIKQILRMT 50 (132)
T ss_dssp EEEEE-CTTCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHTC
T ss_pred EEEEe-CCCChHHHHHHHHHHHcCCceEEEEccC-CCccHHHHHHHHHHc
Confidence 44544 3566889999999999999999999874 688888888877654
No 107
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=48.88 E-value=17 Score=28.72 Aligned_cols=49 Identities=16% Similarity=0.253 Sum_probs=39.6
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
++|.+ -..+..|.+|.+.|+++|+..+.+|+.. .|.+.+.|.+.+++.+
T Consensus 7 i~iY~-~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 7 VTIYH-NPRCSKSRETLALVEQQGITPQVVLYLE-TPPSVDKLKELLQQLG 55 (121)
T ss_dssp CEEEC-CTTCHHHHHHHHHHHTTTCCCEEECTTT-SCCCHHHHHHHHHHTT
T ss_pred EEEEE-CCCCHHHHHHHHHHHHcCCCcEEEeecc-CCCcHHHHHHHHHhcC
Confidence 44443 3456789999999999999999999976 7999999988887765
No 108
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=48.06 E-value=22 Score=25.68 Aligned_cols=65 Identities=17% Similarity=0.229 Sum_probs=39.3
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCH----HHHHHHHh-cCCeEEEEeCCCCCCchH
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDR----STINASVR-KTNRLVTVEEGFPQHGVG 306 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~----~~l~~~~~-~~~~ivvvEe~~~~GGlg 306 (367)
+++|++. .....|.+|...|++.|++.+.+|+....+-+. +.+.+... .+=.++++++ ...+|+.
T Consensus 13 ~v~ly~~-~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g-~~i~G~~ 82 (92)
T 3ic4_A 13 EVLMYGL-STCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGD-KHVLGYN 82 (92)
T ss_dssp SSEEEEC-TTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETT-EEEESCC
T ss_pred eEEEEEC-CCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECC-EEEeCCC
Confidence 4666543 456778888889999999999999876544222 22322222 1224555544 4556764
No 109
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=47.73 E-value=42 Score=27.92 Aligned_cols=66 Identities=11% Similarity=0.195 Sum_probs=40.2
Q ss_pred chhHHHHHHHHHHHHhc------CCceEEEEeee--cCCCCH--------------------HHHHHHHhcCCeEEEEeC
Q 017695 247 SKIVGLSLKAAEILAKE------GISAEVINLRS--IRPLDR--------------------STINASVRKTNRLVTVEE 298 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~------Gi~v~vi~~~~--i~P~d~--------------------~~l~~~~~~~~~ivvvEe 298 (367)
|.+-..+...++.|++. |.+++++|+.. +.|++. +.+.+.+..++.||+.=.
T Consensus 14 ~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~sP 93 (191)
T 1t0i_A 14 RVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTP 93 (191)
T ss_dssp CSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEec
Confidence 33444555556667765 78999999876 333321 345566777776665544
Q ss_pred CCCCCchHHHHHHHH
Q 017695 299 GFPQHGVGAEICASV 313 (367)
Q Consensus 299 ~~~~GGlg~~v~~~l 313 (367)
-+ .+++...+..++
T Consensus 94 ~y-~~~~p~~lK~~i 107 (191)
T 1t0i_A 94 QY-NWGYPAALKNAI 107 (191)
T ss_dssp CB-TTBCCHHHHHHH
T ss_pred eE-CCCCCHHHHHHH
Confidence 33 467777776666
No 110
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=47.68 E-value=42 Score=34.57 Aligned_cols=85 Identities=14% Similarity=0.132 Sum_probs=49.7
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEE-
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVL- 179 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~- 179 (367)
+.++++. .+. ++ .+++-+. .++. .++| ++++.. ++.+. .+++. .......+++. ||.++
T Consensus 147 ~~v~~~~-GDG~~~eG~~~Eal~-~A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 214 (669)
T 2r8o_A 147 HYTYAFM-GDGCMMEGISHEVCS-LAGT--------LKLGKLIAFYDDNGISI-DGHVEGWFTDDTAMRFEAY-GWHVIR 214 (669)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHT-TCEEEE
T ss_pred CeEEEEE-CHhHhcchHHHHHHH-HHHH--------cCCCcEEEEEECCCcEe-ccccccccCccHHHHHHHC-CCeEEe
Confidence 3455554 443 33 4566653 3443 5777 666554 33321 12222 12334677776 88877
Q ss_pred ee--CCHHHHHHHHHHhHc-CCCcEEEec
Q 017695 180 SP--YSSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 180 ~P--~d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
.- .|..++..+++.|.+ .++|++|..
T Consensus 215 ~vdG~d~~~l~~al~~a~~~~~~P~lI~~ 243 (669)
T 2r8o_A 215 DIDGHDAASIKRAVEEARAVTDKPSLLMC 243 (669)
T ss_dssp EEETTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred EECCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 33 379999999999987 588998853
No 111
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.52 E-value=26 Score=26.84 Aligned_cols=62 Identities=8% Similarity=0.076 Sum_probs=38.8
Q ss_pred cEEEEEechhHHHHH------HHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcC------------CeEEEEeCCCC
Q 017695 240 DVTITAFSKIVGLSL------KAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT------------NRLVTVEEGFP 301 (367)
Q Consensus 240 di~Iia~G~~v~~al------~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~------------~~ivvvEe~~~ 301 (367)
+++|++.- ....+. +|.+.|++.|++.+.+|+.. |.+...++.+.. =..|++++..
T Consensus 9 ~V~vy~~~-~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~- 82 (111)
T 2ct6_A 9 VIRVFIAS-SSGFVAIKKKQQDVVRFLEANKIEFEEVDITM----SEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRY- 82 (111)
T ss_dssp CEEEEECS-SCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEE-
T ss_pred EEEEEEcC-CCCCcccchhHHHHHHHHHHcCCCEEEEECCC----CHHHHHHHHHHhcccccccCCCCCCCEEEECCEE-
Confidence 46666653 334455 78888999999999999975 444333333331 2467777654
Q ss_pred CCchHH
Q 017695 302 QHGVGA 307 (367)
Q Consensus 302 ~GGlg~ 307 (367)
.||+-.
T Consensus 83 iGG~d~ 88 (111)
T 2ct6_A 83 CGDYDS 88 (111)
T ss_dssp EEEHHH
T ss_pred EeCHHH
Confidence 578654
No 112
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=47.17 E-value=37 Score=35.08 Aligned_cols=85 Identities=14% Similarity=0.055 Sum_probs=49.3
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCcccc-EEEEeC-CCCCCCCCCCc---hhHHHHHHhcCCCcEEEe
Q 017695 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (367)
Q Consensus 109 ~p~~~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---~~~~~a~~~~iP~~~V~~ 180 (367)
+.++++. .+. ++ ..++-+. .++. .++| ++++.. ++.+. .+++. +......+.+. ||.++.
T Consensus 149 ~~vv~i~-GDG~~~eG~~~Eal~-~A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 216 (680)
T 1gpu_A 149 NYTYVFL-GDGCLQEGISSEASS-LAGH--------LKLGNLIAIYDDNKITI-DGATSISFDEDVAKRYEAY-GWEVLY 216 (680)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHH-TCEEEE
T ss_pred CeEEEEE-CCCccchhhHHHHHH-HHHH--------hCCCcEEEEEECCCceE-ecccccccCccHHHHHHhc-CCeEEE
Confidence 3455554 443 34 4556553 3443 5777 666654 33321 12222 12233566666 888873
Q ss_pred e-C---CHHHHHHHHHHhHc-CCCcEEEec
Q 017695 181 P-Y---SSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 181 P-~---d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
+ . |..++..+++.|.+ .++|++|..
T Consensus 217 ~vdG~~d~~~l~~al~~A~~~~~~P~lI~~ 246 (680)
T 1gpu_A 217 VENGNEDLAGIAKAIAQAKLSKDKPTLIKM 246 (680)
T ss_dssp ESCTTTCHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred EecCCCCHHHHHHHHHHHHHCCCCCEEEEE
Confidence 3 3 78999999999987 588998853
No 113
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=47.11 E-value=21 Score=26.76 Aligned_cols=68 Identities=10% Similarity=0.117 Sum_probs=42.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHh-----cCCeEEEEeCCCCCCchHH
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-----KTNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~-----~~~~ivvvEe~~~~GGlg~ 307 (367)
.+++|++ -+....|..|...|++.|++.+.+++....+-+.+.+.+.++ .+=..+++++....||+..
T Consensus 22 ~~v~ly~-~~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~ 94 (103)
T 3nzn_A 22 GKVIMYG-LSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKE 94 (103)
T ss_dssp SCEEEEE-CSSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESCCH
T ss_pred CeEEEEc-CCCCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEcCCH
Confidence 4566654 456688999999999999999999987653322233333222 1224666666345577653
No 114
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=46.99 E-value=7.6 Score=39.33 Aligned_cols=111 Identities=16% Similarity=0.100 Sum_probs=61.5
Q ss_pred CCceeec-hh-hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEe-CC-CCCC
Q 017695 83 PERVLDT-PI-TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PN-GAAA 156 (367)
Q Consensus 83 p~R~i~~-GI-aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~-G~~~ 156 (367)
|.+|+.. |- +=-..++.|.|++++. -++++++. .+. ++..++.+. .+.. .++|++++. .+ +...
T Consensus 414 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~-ta~~--------~~l~~~ivv~nN~~~~~ 483 (589)
T 2pgn_A 414 PRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLGT-GDGALYYHFNEFR-VAVE--------HKLPVITMVFTNESYGA 483 (589)
T ss_dssp TTCEESCTTTCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHH-HHHH--------TTCCCEEEEEECSBCHH
T ss_pred CCcEECCCCcchhhhHHHHHHHHHHhCCCCcEEEEE-eeHHHHhhHHHHH-HHHH--------hCCCeEEEEEECCCccc
Confidence 6678864 11 1123567888888763 35666654 332 223344432 2332 477766554 22 2210
Q ss_pred -C-C-----CC---Cc--hhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 157 -G-V-----GA---QH--SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 157 -g-~-----G~---tH--~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
+ . +. +. .-.+..+..++ |+..+...+.+|+..+++++++.++|++|-
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 542 (589)
T 2pgn_A 484 NWTLMNHQFGQNNWTEFMNPDWVGIAKAF-GAYGESVRETGDIAGALQRAIDSGKPALIE 542 (589)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHHH-TCEEEECTTTCCHHHHHHHHHHHCSCEEEE
T ss_pred chHHHHhhcCCCccccCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 0 00 10 01123444444 667777889999999999999888999884
No 115
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=46.98 E-value=15 Score=30.77 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=24.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
.||+||..|..- +.||..|.+.|++|.|++-
T Consensus 3 ~dV~IIGaGpaG---L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAG---LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHH---HHHHHHHHHCCCCEEEEEC
Confidence 479999988643 3466678899999999984
No 116
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=46.71 E-value=16 Score=31.37 Aligned_cols=53 Identities=13% Similarity=0.234 Sum_probs=34.4
Q ss_pred cEEEEEechhHH----HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 240 DVTITAFSKIVG----LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 240 di~Iia~G~~v~----~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
++.+-+.|.... .--.|.+.|++.||+.. ..-++++.+.+. ..+.||++++.+
T Consensus 65 ~~~v~SAGt~~~~G~~~dp~a~~vl~e~Gidis----hrar~lt~~d~~----~~DlIltMd~~~ 121 (184)
T 4etn_A 65 NVNVRSAGVFASPNGKATPHAVEALFEKHIALN----HVSSPLTEELME----SADLVLAMTHQH 121 (184)
T ss_dssp CEEEEEEETTCCTTCBCCHHHHHHHHHTTCCCC----CBCCBCCHHHHH----HCSEEEESSHHH
T ss_pred cEEEEeeecCCcCCCCCCHHHHHHHHHcCCCch----hccCcCCHHHcC----CCCEEEEcCcHH
Confidence 455566665321 11245666888899876 456778877654 478999998754
No 117
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=46.54 E-value=73 Score=29.88 Aligned_cols=72 Identities=15% Similarity=0.057 Sum_probs=46.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeee-------------cCCCCHHHHHHHHhcCCeEEEEeCCCCCC
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS-------------IRPLDRSTINASVRKTNRLVTVEEGFPQH 303 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~-------------i~P~d~~~l~~~~~~~~~ivvvEe~~~~G 303 (367)
.|+.+.|++.|..... .++.+++.|+++-++|... ....|.+.+.+.+++.+ +|+.|-...
T Consensus 13 ~~k~IlIlG~G~~g~~---la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~d-vI~~~~e~~-- 86 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRM---MALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISD-VVTYEFENI-- 86 (389)
T ss_dssp TTSEEEEECCSHHHHH---HHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCS-EEEESCCCC--
T ss_pred CCCEEEEECCCHHHHH---HHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCC-Eeeeccccc--
Confidence 5678999999985444 4445666799999998632 23456778888888776 456665432
Q ss_pred chHHHHHHHHHHh
Q 017695 304 GVGAEICASVIEE 316 (367)
Q Consensus 304 Glg~~v~~~l~~~ 316 (367)
...+++.+.+.
T Consensus 87 --~~~~~~~l~~~ 97 (389)
T 3q2o_A 87 --DYRCLQWLEKH 97 (389)
T ss_dssp --CHHHHHHHHHH
T ss_pred --cHHHHHHHHhh
Confidence 23444555443
No 118
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=46.48 E-value=33 Score=27.23 Aligned_cols=63 Identities=10% Similarity=0.100 Sum_probs=40.3
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHh-cCCeEEEEeCCCCC--CchHHHHHHHHHH
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-KTNRLVTVEEGFPQ--HGVGAEICASVIE 315 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~-~~~~ivvvEe~~~~--GGlg~~v~~~l~~ 315 (367)
+|++-..|...++.|++.|++++++++....+-+ +. +++.+|+.=.-+-. |.+-..+..++..
T Consensus 12 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~~ 77 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGGHEVTLLNAADASAEN-------LADGYDAVLFGCSAWGMEDLEMQDDFLSLFEE 77 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTT-------TTTTCSEEEEEECEECSSSCEECHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhH-------hcccCCEEEEEecccCCCCCCCcHHHHHHHHH
Confidence 3555566666677777789999999887654322 22 56766665544433 5666677777643
No 119
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=46.17 E-value=26 Score=26.60 Aligned_cols=66 Identities=15% Similarity=0.175 Sum_probs=42.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHh----c-CCeEEEEeCCCCCCchHH
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR----K-TNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~----~-~~~ivvvEe~~~~GGlg~ 307 (367)
.++++++. +....|..|...|++.|+....+|+....|-+ +.+.+.++ . +=..+++.. ...||+-.
T Consensus 19 ~~v~vy~~-~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~-~~~~~~l~~~~g~~tvP~ifi~g-~~igG~~~ 89 (113)
T 3rhb_A 19 NTVVIYSK-TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQG-PQLQKVLERLTGQHTVPNVFVCG-KHIGGCTD 89 (113)
T ss_dssp SSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHH-HHHHHHHHHHHSCCSSCEEEETT-EEEESHHH
T ss_pred CCEEEEEC-CCChhHHHHHHHHHHcCCCCeEEEeecCCCCh-HHHHHHHHHHhCCCCcCEEEECC-EEEcCcHH
Confidence 45777665 66788999999999999999999987653322 22222222 1 224555554 45688654
No 120
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=45.90 E-value=33 Score=35.61 Aligned_cols=62 Identities=13% Similarity=0.030 Sum_probs=40.2
Q ss_pred cccc-EEEEeC-CCCCCCCCCC---chhHHHHHHhcCCCcEEEee---CCHHHHHHHHHHhHc-CCCcEEEec
Q 017695 142 ISVP-IVFRGP-NGAAAGVGAQ---HSHCYAAWYASVPGLKVLSP---YSSEDARGLLKAAIR-DPDPVVFLE 205 (367)
Q Consensus 142 ~~~p-vv~~~~-~G~~~g~G~t---H~~~~~a~~~~iP~~~V~~P---~d~~e~~~~~~~a~~-~~~Pv~ir~ 205 (367)
.++| ++++.. ++.+. +|++ +.......+++. ||.++.. .|..++..+++.|.+ .++|++|..
T Consensus 195 ~~L~nli~i~d~N~~si-~~~~~~~~~~~~~~~~~a~-G~~~~~V~DG~D~~al~~Al~~A~~~~~~P~lI~~ 265 (700)
T 3rim_A 195 QQLGNLIVFYDRNQISI-EDDTNIALCEDTAARYRAY-GWHVQEVEGGENVVGIEEAIANAQAVTDRPSFIAL 265 (700)
T ss_dssp TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHH-TCEEEEEECTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred cCCCcEEEEEECCCccc-ccchhhccchhHHHHHHHc-CCeEEEECCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 5886 666654 34321 1222 222233566666 7888765 588999999999987 589999863
No 121
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=45.90 E-value=30 Score=26.80 Aligned_cols=60 Identities=5% Similarity=0.055 Sum_probs=36.2
Q ss_pred chhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHH--HHHHHH
Q 017695 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAE--ICASVI 314 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~--v~~~l~ 314 (367)
|++-..|...++.|++.|++++++++... |.+. +.+++.+++.=.-+ .+|.... +..++.
T Consensus 11 GnT~~~a~~i~~~l~~~g~~v~~~~~~~~---~~~~----l~~~d~vi~g~p~y-~~~~~~~~~~~~fl~ 72 (137)
T 2fz5_A 11 GNTEAMANEIEAAVKAAGADVESVRFEDT---NVDD----VASKDVILLGCPAM-GSEELEDSVVEPFFT 72 (137)
T ss_dssp SHHHHHHHHHHHHHHHTTCCEEEEETTSC---CHHH----HHTCSEEEEECCCB-TTTBCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEEcccC---CHHH----HhcCCEEEEEcccc-CCCCCCHHHHHHHHH
Confidence 44555566666677778999999986543 4332 45677776654433 3554333 665554
No 122
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=45.55 E-value=27 Score=30.27 Aligned_cols=55 Identities=20% Similarity=0.246 Sum_probs=37.6
Q ss_pred CCcEEEEEechhH----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 238 GKDVTITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 238 g~di~Iia~G~~v----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
++++++|.|++.. .......+.|++-|+++.++++.. -+.+.+.+.+++.+.|++
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~---~~~~~~~~~l~~ad~I~l 85 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT---ESLGEITTKLRKNDFIYV 85 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT---SCHHHHHHHHHHSSEEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC---CChHHHHHHHHhCCEEEE
Confidence 6789999988752 234445556777799888876554 355556667777887665
No 123
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=44.73 E-value=1.2e+02 Score=24.44 Aligned_cols=49 Identities=22% Similarity=0.286 Sum_probs=32.5
Q ss_pred chhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeC
Q 017695 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
|++-..|...++.|++.|++++++|+.. .|.+.+...+.+++.||+.=.
T Consensus 12 GnT~~~A~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~d~ii~Gsp 60 (161)
T 3hly_A 12 GYSDRLSQAIGRGLVKTGVAVEMVDLRA---VDPQELIEAVSSARGIVLGTP 60 (161)
T ss_dssp TTHHHHHHHHHHHHHHTTCCEEEEETTT---CCHHHHHHHHHHCSEEEEECC
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECCC---CCHHHHHHHHHhCCEEEEEcC
Confidence 4445556666677777899999887764 355556555667777666544
No 124
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=44.30 E-value=28 Score=26.10 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=42.4
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-CCeEEEEeCCCCCCchHH
Q 017695 239 KDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 239 ~di~Iia~G----~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-~~~ivvvEe~~~~GGlg~ 307 (367)
.+++|++.| .....|..|...|++.|++...+|+..- |--.+.+.+.... +=..|+++ +...||+-.
T Consensus 17 ~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~-~~~~~~l~~~~g~~~vP~v~i~-g~~igg~d~ 88 (105)
T 2yan_A 17 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED-EEVRQGLKAYSNWPTYPQLYVK-GELVGGLDI 88 (105)
T ss_dssp SSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEET-TEEEECHHH
T ss_pred CCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCCC-HHHHHHHHHHHCCCCCCeEEEC-CEEEeChHH
Confidence 458888876 5678888999999999999999998751 2111223332222 22355554 455688654
No 125
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=43.71 E-value=16 Score=30.47 Aligned_cols=53 Identities=13% Similarity=0.206 Sum_probs=33.7
Q ss_pred cEEEEEechhH-----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 240 DVTITAFSKIV-----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 240 di~Iia~G~~v-----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
++.+.+.|... ..--.|.+.|++.||+.+ +.-++++.+.+. ..+.||++++++
T Consensus 37 ~~~v~SAGt~~~~~g~~~~p~a~~~l~e~Gid~s----~~ar~l~~~~~~----~~DlIi~M~~~~ 94 (161)
T 2cwd_A 37 RFEVDSAGTGAWHVGEPMDPRARRVLEEEGAYFP----HVARRLTREDVL----AYDHILVMDREN 94 (161)
T ss_dssp TEEEEEEESSCTTTTCCCCHHHHHHHHHHTCCCC----CCCCBCCHHHHH----HCSEEEESSHHH
T ss_pred cEEEEecccCCCccCCCCCHHHHHHHHHcCcCcc----ccccCCCHhHhc----cCCEEEECChHH
Confidence 34555555443 112245666788899875 456777776553 478999998854
No 126
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=43.02 E-value=78 Score=25.13 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=36.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee------ec-------------CCCCHHHHHHH-HhcCCeEEEE
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR------SI-------------RPLDRSTINAS-VRKTNRLVTV 296 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~------~i-------------~P~d~~~l~~~-~~~~~~ivvv 296 (367)
..+++|+++|..... .++.|.+.|.++.+++.. .+ .+.|.+.+.+. +++.+.+++.
T Consensus 3 ~~~vlI~G~G~vG~~---la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGHSILAIN---TILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECCSHHHHH---HHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECCCHHHHH---HHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 356888888876654 455677889999999874 12 12345666555 6667766654
No 127
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=42.63 E-value=36 Score=29.07 Aligned_cols=64 Identities=6% Similarity=0.204 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHhcCCceEEEEeeecCCCCH----------HHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 249 IVGLSLKAAEILAKEGISAEVINLRSIRPLDR----------STINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 249 ~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~----------~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
......+++..+.++|.+++++|+.-|-.|+. +.+.+.++..+.+|++=.-+ .|++...+..++
T Consensus 17 ~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeY-n~s~pg~LKn~i 90 (190)
T 3u7r_A 17 LNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEY-NRSYPGMIKNAI 90 (190)
T ss_dssp HHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhh-cccCCHHHHHHH
Confidence 34444555566666799999999877633332 24667788888766655543 467766666655
No 128
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.59 E-value=30 Score=27.83 Aligned_cols=48 Identities=4% Similarity=-0.091 Sum_probs=36.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCC-CHHHHHH
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL-DRSTINA 285 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~-d~~~l~~ 285 (367)
.+++++|+-|+.+-..+..++.|.+.|.++.++-.++-.-+ -.+.|.+
T Consensus 18 ~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~g~R~~~~~~~~~el~~ 66 (142)
T 3lyu_A 18 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEK 66 (142)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEEEEEEGGGCCSHHHHHT
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHH
Confidence 46899999999999999988888888888988855554332 3455544
No 129
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=42.46 E-value=15 Score=29.02 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC
Q 017695 248 KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (367)
Q Consensus 248 ~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~ 291 (367)
..+..|.+|.+.|+++|+..+.+|+.. .|.+.+.|.+.+++.+
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~t~~eL~~~l~~~g 54 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLE-TSPSVEELKRLYQQLG 54 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHH-HCCCHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHcCCceEEEEecc-CcCcHHHHHHHHHHcC
Confidence 456789999999999999999999976 6899998887776654
No 130
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=41.11 E-value=31 Score=29.33 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=43.3
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCC-----------------CH-HHHHHHHhcCCeEEEEeCCCCCCchHH
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPL-----------------DR-STINASVRKTNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~-----------------d~-~~l~~~~~~~~~ivvvEe~~~~GGlg~ 307 (367)
+|.+-..|...++.|++.|.+++++|+....|. |. +.+.+.+..++.||+.=.- ..|++..
T Consensus 17 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP~-y~~~~~~ 95 (211)
T 1ydg_A 17 TGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSSPT-RFGGATS 95 (211)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEEE-ETTEECH
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEEeccccccchhhhcccccccccccccchhHHHHHHHHHCCEEEEEcCc-cccCccH
Confidence 355556666777788888999999998775110 10 1233455667776665443 3577777
Q ss_pred HHHHHHH
Q 017695 308 EICASVI 314 (367)
Q Consensus 308 ~v~~~l~ 314 (367)
.+..++.
T Consensus 96 ~lk~~ld 102 (211)
T 1ydg_A 96 QMRAFID 102 (211)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 131
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=41.03 E-value=85 Score=23.78 Aligned_cols=66 Identities=17% Similarity=0.249 Sum_probs=41.8
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHH----hc-CCeEEEEeCCCCCCchHH
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV----RK-TNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~----~~-~~~ivvvEe~~~~GGlg~ 307 (367)
..+++|++. +....|..|.+.|++.|++.+.+|+... + |.+.+.+.+ .. +=..+++.. ...||+..
T Consensus 16 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~~~~~dvd~~-~-~~~~~~~~l~~~~g~~tvP~vfi~g-~~igG~d~ 86 (114)
T 3h8q_A 16 RSRVVIFSK-SYCPHSTRVKELFSSLGVECNVLELDQV-D-DGARVQEVLSEITNQKTVPNIFVNK-VHVGGCDQ 86 (114)
T ss_dssp HCSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTTS-T-THHHHHHHHHHHHSCCSSCEEEETT-EEEESHHH
T ss_pred cCCEEEEEc-CCCCcHHHHHHHHHHcCCCcEEEEecCC-C-ChHHHHHHHHHHhCCCccCEEEECC-EEEeCHHH
Confidence 456777665 6678899999999999999999987643 1 223332222 21 224555644 55688654
No 132
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=40.91 E-value=9.6 Score=30.48 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=29.3
Q ss_pred eeeCCcEEEEEechhHH--HHHHHHHHHHhcCCceEEEEee
Q 017695 235 EREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 235 ~~~g~di~Iia~G~~v~--~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
+.++-|++||++|.... .--+..+.|+++||.++++|-+
T Consensus 58 l~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 58 VEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp HTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHH
T ss_pred hhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHH
Confidence 44568999999997554 3445567799999999998654
No 133
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=40.89 E-value=61 Score=32.73 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=65.2
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (367)
|.+|++.|- .--..+++|.|+|++- -++++++. .+. ++..+..+. .++. .++|++++. .++...
T Consensus 432 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~-ta~~--------~~l~~~ivv~NN~~~~~ 501 (616)
T 2pan_A 432 DRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAIS-GDFDFQFLIEELA-VGAQ--------FNIPYIHVLVNNAYLGL 501 (616)
T ss_dssp TTSEEECTTTCCTTCHHHHHHHHHHHCTTCEEEEEE-EHHHHHHTGGGHH-HHHH--------TTCCCEEEEEECSBCHH
T ss_pred CCeEEcCCCcccccchHHHHHHHHHhCCCCcEEEEE-cchhhhCCHHHHH-HHHH--------hCCCeEEEEEECCcchH
Confidence 678998654 2233778888888764 35666665 332 223344332 2332 467765543 222210
Q ss_pred ---------C--------CCC--C-c---hhHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHc----CCCcEEEe
Q 017695 157 ---------G--------VGA--Q-H---SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFL 204 (367)
Q Consensus 157 ---------g--------~G~--t-H---~~~~~a~~~~iP~~~V~~P~d~~e~~~~~~~a~~----~~~Pv~ir 204 (367)
+ .+. + | ...+..+..++ |+..+...++.|+..+++++++ .++|++|-
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lIe 575 (616)
T 2pan_A 502 IRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGL-GCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVE 575 (616)
T ss_dssp HHHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHT-TCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCCCHHHHHHHc-CCeEEEECCHHHHHHHHHHHHhhcccCCCcEEEE
Confidence 0 010 1 1 01233555665 6777778899999999999998 78999883
No 134
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=40.85 E-value=32 Score=33.12 Aligned_cols=61 Identities=20% Similarity=0.166 Sum_probs=35.0
Q ss_pred ccccEEEEeC-CCCCCCCCCCch---hHHH-HHHhcCCCcEEEe--eCCHHHHHHHHHHhHc----CCCcEEEe
Q 017695 142 ISVPIVFRGP-NGAAAGVGAQHS---HCYA-AWYASVPGLKVLS--PYSSEDARGLLKAAIR----DPDPVVFL 204 (367)
Q Consensus 142 ~~~pvv~~~~-~G~~~g~G~tH~---~~~~-a~~~~iP~~~V~~--P~d~~e~~~~~~~a~~----~~~Pv~ir 204 (367)
.++|+++++. ++... .++++. ..+. ....+. |+.++. -.|+.++..+++.|.+ .++|++|-
T Consensus 211 ~~lpvi~vv~NN~~~i-~~~~~~~~~~~d~~~~a~a~-G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe 282 (400)
T 2bfd_A 211 LECPIIFFCRNNGYAI-STPTSEQYRGDGIAARGPGY-GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIE 282 (400)
T ss_dssp TTCCEEEEEEECSEET-TEEGGGTCSSSTTGGGTGGG-TCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HCcCEEEEEECCceee-eecccccCCCCCHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4789988865 33221 112211 1111 233332 454443 3478999999988886 57899884
No 135
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=40.83 E-value=56 Score=32.61 Aligned_cols=111 Identities=9% Similarity=0.016 Sum_probs=57.8
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccccEEEEe--CCCCCC
Q 017695 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (367)
Q Consensus 83 p~R~i~~GI--aE~~~vg~AaGlA~~G-~~p~~~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (367)
|.+|+..+- +=-..+++|.|++++- -++++++. .+.. +..+..+. .+.. .++|++++. .++...
T Consensus 415 ~~~~~~~~~~g~mG~~l~~A~Gaala~~~~~vv~~~-GDG~~~~~~~eL~-ta~~--------~~l~~~ivv~nN~~~~~ 484 (570)
T 2vbf_A 415 NSRFIGQPLWGSIGYTFPAALGSQIADKESRHLLFI-GDGSLQLTVQELG-LSIR--------EKLNPICFIINNDGYTV 484 (570)
T ss_dssp TCEEECCTTTCCTTTHHHHHHHHHHHCTTSEEEEEE-EHHHHHHHGGGHH-HHHH--------TTCCCEEEEEESSSCHH
T ss_pred CCeEecCccchhhhhhHHHHHHHHHhCCCCcEEEEE-cchhhhcCHHHHH-HHHH--------cCCCCEEEEEECCchHH
Confidence 556763221 1224567777877763 35666654 3322 22343332 2332 467766553 223211
Q ss_pred --C-CCC------CchhHHHHHHhcCCCcE-----EEeeCCHHHHHHHHHH-hHcCCCcEEEe
Q 017695 157 --G-VGA------QHSHCYAAWYASVPGLK-----VLSPYSSEDARGLLKA-AIRDPDPVVFL 204 (367)
Q Consensus 157 --g-~G~------tH~~~~~a~~~~iP~~~-----V~~P~d~~e~~~~~~~-a~~~~~Pv~ir 204 (367)
. .|. .|...+..+.+.+ |+. .+...+.+|+..++++ +.+.++|++|-
T Consensus 485 ~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~~v~~~~el~~al~~a~~~~~~p~lie 546 (570)
T 2vbf_A 485 EREIHGPTQSYNDIPMWNYSKLPETF-GATEDRVVSKIVRTENEFVSVMKEAQADVNRMYWIE 546 (570)
T ss_dssp HHHHSCTTCGGGCCCCCCGGGHHHHT-TCCTTTEEEEEECBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHHhccCCCccCCCCCCHHHHHHHc-CCCcCCcceEEecCHHHHHHHHHHHHhcCCCcEEEE
Confidence 0 111 1111122344443 444 5667899999999998 46778899883
No 136
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=39.87 E-value=32 Score=25.76 Aligned_cols=71 Identities=14% Similarity=0.210 Sum_probs=42.6
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHH-hc-CCeEEEEeCCCCCCchHHHHHHHH
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV-RK-TNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~-~~-~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
.+++|++. .....|.+|.+.|++.|+..+.+|+..- |--.+.+.+.. .. +=..|+++. ...||+.. +.+..
T Consensus 16 ~~v~vy~~-~~Cp~C~~ak~~L~~~~i~y~~idI~~~-~~~~~~l~~~~~g~~~vP~ifi~g-~~igG~d~-l~~~~ 88 (99)
T 3qmx_A 16 AKIEIYTW-STCPFCMRALALLKRKGVEFQEYCIDGD-NEAREAMAARANGKRSLPQIFIDD-QHIGGCDD-IYALD 88 (99)
T ss_dssp CCEEEEEC-TTCHHHHHHHHHHHHHTCCCEEEECTTC-HHHHHHHHHHTTTCCCSCEEEETT-EEEESHHH-HHHHH
T ss_pred CCEEEEEc-CCChhHHHHHHHHHHCCCCCEEEEcCCC-HHHHHHHHHHhCCCCCCCEEEECC-EEEeChHH-HHHHH
Confidence 46777664 4567899999999999999999998752 11112233222 21 124555555 45688654 44433
No 137
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=39.84 E-value=79 Score=26.24 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=43.0
Q ss_pred echhHHHHHHHHHHHHhcCCceEEEEeeecCCC----------C----HHHHHHHHhcCCeEEEEeCCCCCCchHHHHHH
Q 017695 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPL----------D----RSTINASVRKTNRLVTVEEGFPQHGVGAEICA 311 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~----------d----~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~ 311 (367)
+|++-..|..+++.|++.|++++++++....|. | .+. .+.+.+++.||+.=.-+ .|++...+..
T Consensus 14 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~-~~~l~~aD~ii~gsP~y-~~~~~~~lk~ 91 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVT-LDDMRWADGFAIGSPTR-YGNMAGGLKT 91 (199)
T ss_dssp SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCC-HHHHHHCSEEEEEEECB-TTBCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCccccccccc-HHHHHhCCEEEEECCcc-ccCccHHHHH
Confidence 455556666777788888999999999775111 0 111 23455677766655533 4778777777
Q ss_pred HHH
Q 017695 312 SVI 314 (367)
Q Consensus 312 ~l~ 314 (367)
++-
T Consensus 92 ~ld 94 (199)
T 2zki_A 92 FLD 94 (199)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 138
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=39.29 E-value=42 Score=26.49 Aligned_cols=61 Identities=8% Similarity=0.000 Sum_probs=36.0
Q ss_pred chhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-CCeEEEEeCCCCCCc--hHHHHHHHHH
Q 017695 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHG--VGAEICASVI 314 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-~~~ivvvEe~~~~GG--lg~~v~~~l~ 314 (367)
|++-..|...++.|++.|++++++++....|-+ +.+ ++.+|+.=.-+-.|- +-..+..++.
T Consensus 12 Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~~~p~y~~g~~~~p~~~~~fl~ 75 (147)
T 1f4p_A 12 GNTEYTAETIARELADAGYEVDSRDAASVEAGG-------LFEGFDLVLLGCSTWGDDSIELQDDFIPLFD 75 (147)
T ss_dssp SHHHHHHHHHHHHHHHHTCEEEEEEGGGCCSTT-------TTTTCSEEEEEECEECSSSCEECTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCeeEEEehhhCCHHH-------hcCcCCEEEEEeCCCCCCCcCCChhHHHHHH
Confidence 444455555666777789999999987764422 445 676666544332233 3445555553
No 139
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=39.26 E-value=86 Score=24.31 Aligned_cols=32 Identities=6% Similarity=-0.045 Sum_probs=23.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
..+++|+++|.+-. ..++.|.++|.++.++|.
T Consensus 6 ~~~v~I~G~G~iG~---~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAAGV---GLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHHHH---HHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHHHH---HHHHHHHHCCCeEEEEEC
Confidence 45788999887443 355678888999999885
No 140
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=38.39 E-value=63 Score=27.41 Aligned_cols=49 Identities=10% Similarity=0.259 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc-----CCeEEEEeCCC
Q 017695 250 VGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-----TNRLVTVEEGF 300 (367)
Q Consensus 250 v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~-----~~~ivvvEe~~ 300 (367)
-....++++.++++||++.+|.+-+-.. +.+ +.+.+++ ..+++++.+..
T Consensus 121 ~~~~~~~a~~lk~~gi~v~~Ig~G~~~~-~~~-l~~la~~~n~~~~s~~~~~~~~~ 174 (192)
T 2x5n_A 121 EKNLIRLAKRMKKNNVAIDIIHIGELQN-ESA-LQHFIDAANSSDSCHLVSIPPSP 174 (192)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHHHCSTTCCEEEEECCCS
T ss_pred chhHHHHHHHHHHCCCEEEEEEeCCCCc-cHH-HHHHHHhccCCCceEEEEecCcc
Confidence 4567788999999999999999887543 223 4444443 23677777765
No 141
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=37.95 E-value=52 Score=31.72 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=22.3
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhHc----CCCcEEEe
Q 017695 172 SVPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFL 204 (367)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~~~~a~~----~~~Pv~ir 204 (367)
.+|.+.| .-.|+.++..+++.|++ .++|++|-
T Consensus 267 G~~~~~V-dG~D~~av~~a~~~A~~~ar~~~gP~lIe 302 (407)
T 1qs0_A 267 GIASLRV-DGNDFVAVYAASRWAAERARRGLGPSLIE 302 (407)
T ss_dssp TCEEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCeEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 3444432 33478899999988875 57899884
No 142
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=36.81 E-value=76 Score=26.25 Aligned_cols=65 Identities=11% Similarity=0.123 Sum_probs=39.6
Q ss_pred echhHHHHHHHHHHHHh-cCCceEEEEeeecCCCCHHHH--------------HHHHhcCCeEEEEeCCCCCCchHHHHH
Q 017695 246 FSKIVGLSLKAAEILAK-EGISAEVINLRSIRPLDRSTI--------------NASVRKTNRLVTVEEGFPQHGVGAEIC 310 (367)
Q Consensus 246 ~G~~v~~al~Aa~~L~~-~Gi~v~vi~~~~i~P~d~~~l--------------~~~~~~~~~ivvvEe~~~~GGlg~~v~ 310 (367)
+|.+-..|...++.|++ .|++++++++....| .... .+.+.+++.||+.=.-+ .|++...+.
T Consensus 12 ~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk 88 (198)
T 3b6i_A 12 YGHIETMARAVAEGASKVDGAEVVVKRVPETMP--PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTR-FGNMSGQMR 88 (198)
T ss_dssp SSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSC--HHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEEEEE-TTEECHHHH
T ss_pred CcHHHHHHHHHHHHHhhcCCCEEEEEEccccCc--hhhhhhcccccccCchhhHHHHHHCCEEEEEeChh-cCCchHHHH
Confidence 35556667777788888 899999999986522 1110 23345566555544322 566666666
Q ss_pred HHH
Q 017695 311 ASV 313 (367)
Q Consensus 311 ~~l 313 (367)
.++
T Consensus 89 ~~l 91 (198)
T 3b6i_A 89 TFL 91 (198)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 143
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=36.74 E-value=50 Score=27.37 Aligned_cols=56 Identities=9% Similarity=0.185 Sum_probs=39.3
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhc-C--CceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCC
Q 017695 240 DVTITAFSKIV----GLSLKAAEILAKE-G--ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEG 299 (367)
Q Consensus 240 di~Iia~G~~v----~~al~Aa~~L~~~-G--i~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~ 299 (367)
+++|+++|+.. ..-..+++.|+++ . -+++++|..+.-+ + +...+...+++|+||--
T Consensus 2 ~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~~---~-l~~~l~~~d~lIiVDA~ 64 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAGM---E-LLGDMANRDHLIIADAI 64 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCCG---G-GHHHHSSCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCHH---H-HHHHHhCCCEEEEEEeh
Confidence 47899999875 2355677888764 2 3699999998632 2 23456678899998863
No 144
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=36.69 E-value=26 Score=29.04 Aligned_cols=38 Identities=8% Similarity=0.260 Sum_probs=25.9
Q ss_pred HHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 255 KAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 255 ~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
.|.+.|++.||+.+ +.-++++.+.+ ...+.||++++.+
T Consensus 61 ~a~~~l~~~Gid~s----~~ar~l~~~~~----~~~DlIl~M~~~~ 98 (161)
T 1d1q_A 61 RTVSICKQHGVKIN----HKGKQIKTKHF----DEYDYIIGMDESN 98 (161)
T ss_dssp HHHHHHHHTTCCCC----CCBCBCCGGGG----GTCSEEEESSHHH
T ss_pred HHHHHHHHcCcCCC----ceEeECCHHHH----hhCCEEEEeCHHH
Confidence 35566788899887 34456665533 4678999998753
No 145
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=36.67 E-value=11 Score=30.27 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=26.9
Q ss_pred CCcEEEEEechhHH-HHHHHHHHHHhcCCceEEEEee
Q 017695 238 GKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 238 g~di~Iia~G~~v~-~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
.-|++||++|.... .--+..+.|+++||.++++|-+
T Consensus 68 ~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 104 (128)
T 2fi9_A 68 QIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMSTG 104 (128)
T ss_dssp GCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECHH
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 47899999997642 2234556789999999998654
No 146
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=36.65 E-value=81 Score=25.98 Aligned_cols=57 Identities=19% Similarity=0.053 Sum_probs=35.1
Q ss_pred cEEEEEechhHH----HHHHHHHHHHhcC-CceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeC
Q 017695 240 DVTITAFSKIVG----LSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 240 di~Iia~G~~v~----~al~Aa~~L~~~G-i~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
+++|+++|+... .-..+++.|++.. -+++++|..+.-+--...|.+. +.+++|+||-
T Consensus 5 ~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~v~vid~gt~~~~l~~~l~~~--~~d~lIiVDA 66 (159)
T 2e85_A 5 TDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPENDIVAIREL--RPTRLLIVDA 66 (159)
T ss_dssp CEEEEEECCGGGGGGGHHHHHHHHHHHSCCTTCEEEECTTCSGGGHHHHHHH--CCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcC--CCCEEEEEEe
Confidence 468888887652 3456777777652 2588888888643222222221 4578888875
No 147
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=36.47 E-value=79 Score=26.57 Aligned_cols=60 Identities=8% Similarity=0.169 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhcCCceEEEEeeecCCCC----------HHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 252 LSLKAAEILAKEGISAEVINLRSIRPLD----------RSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~vi~~~~i~P~d----------~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
.+..+++.++ .|.+++++|+.-+-.++ .+.+.+.+...+.||+.=.-+ .+++...+..++
T Consensus 21 la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y-~~~~p~~lK~~i 90 (192)
T 3fvw_A 21 LAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVY-NYAIPGPVKNLL 90 (192)
T ss_dssp HHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred HHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccc-ccCCCHHHHHHH
Confidence 3444555565 68999999998652222 234667788888877765544 577777766665
No 148
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=36.43 E-value=61 Score=25.66 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=34.3
Q ss_pred HHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc------------CCeEEEEeCCCCCCchHHH
Q 017695 253 SLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK------------TNRLVTVEEGFPQHGVGAE 308 (367)
Q Consensus 253 al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~------------~~~ivvvEe~~~~GGlg~~ 308 (367)
+..|...|+.+||..+.+|+.. |.+.-.+..++ +-..|++++.. .||+-+.
T Consensus 19 c~~aK~lL~~kgV~feEidI~~----d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~-iGG~Dd~ 81 (121)
T 1u6t_A 19 QQDVLGFLEANKIGFEEKDIAA----NEENRKWMRENVPENSRPATGYPLPPQIFNESQY-RGDYDAF 81 (121)
T ss_dssp HHHHHHHHHHTTCCEEEEECTT----CHHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEE-EEEHHHH
T ss_pred HHHHHHHHHHCCCceEEEECCC----CHHHHHHHHHhccccccccCCCcCCCEEEECCEE-EechHHH
Confidence 5788889999999999999975 44433233322 22467777755 6887553
No 149
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=36.18 E-value=11 Score=30.69 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=26.6
Q ss_pred CCcEEEEEechhHH-HHHHHHHHHHhcCCceEEEEee
Q 017695 238 GKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 238 g~di~Iia~G~~v~-~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
.-|++||++|.... .--+..+.|+++||.++++|-+
T Consensus 67 ~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~ 103 (135)
T 2fvt_A 67 AIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTG 103 (135)
T ss_dssp SCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 47899999996543 2234456788999999998655
No 150
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=36.02 E-value=49 Score=30.88 Aligned_cols=57 Identities=19% Similarity=0.346 Sum_probs=39.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee----------------ecCC---CCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR----------------SIRP---LDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~----------------~i~P---~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||+.|.++... ++..|...|..|+|.|.. +..+ .+.+.+.+.+++.+-||+
T Consensus 176 ~gk~vvVIG~G~iVG~~--~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRP--LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCcchHHH--HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 46789999999887654 556777788888888542 1111 344678888888886664
No 151
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=35.96 E-value=93 Score=25.00 Aligned_cols=60 Identities=10% Similarity=0.170 Sum_probs=41.1
Q ss_pred CcEEEEEec-hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHH-HHhcCCeEEEEeCC
Q 017695 239 KDVTITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINA-SVRKTNRLVTVEEG 299 (367)
Q Consensus 239 ~di~Iia~G-~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~-~~~~~~~ivvvEe~ 299 (367)
.++.|+..+ .....|.+..+.|++.|+.|++.+.++=-++-.. |.+ ...+...+++|-+-
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~k-IR~a~~~kvPy~lVVG~k 70 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQA-LEDVSRGGSPFAIVITQQ 70 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHH-HHHHHHHTCSEEEEECHH
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHH-HHHHHHcCCCEEEEEech
Confidence 356777666 4668999999999999999998654322333333 444 35567788887663
No 152
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=35.62 E-value=1.3e+02 Score=33.29 Aligned_cols=37 Identities=22% Similarity=0.221 Sum_probs=29.2
Q ss_pred HHHhc--CCCcEEEee-CCHHHHHHHHHHhHcCCCcEEEe
Q 017695 168 AWYAS--VPGLKVLSP-YSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 168 a~~~~--iP~~~V~~P-~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.+..+ ++.+....+ .+++|+..+++.|++.++|++|-
T Consensus 1026 ~iA~a~G~~~va~~~v~~~~~~l~~al~eAl~~~GP~lI~ 1065 (1231)
T 2c42_A 1026 RMVMTYGYVYVATVSMGYSKQQFLKVLKEAESFPGPSLVI 1065 (1231)
T ss_dssp HHHHTTSSSEEEEECTTTCHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHCCCCEEEEEeccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 44444 555556667 59999999999999999999984
No 153
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=35.39 E-value=59 Score=27.06 Aligned_cols=60 Identities=12% Similarity=-0.027 Sum_probs=34.1
Q ss_pred chhHHHHHHHHHHHHh-cCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 247 SKIVGLSLKAAEILAK-EGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~-~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
|++-..|...++.|++ .|++++++++... +.+. +.+++.||+.=.-+ .|++...+..++.
T Consensus 16 GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~---~~~~----l~~aD~ii~gsP~y-~g~~~~~lk~fld 76 (188)
T 2ark_A 16 GNTKKMAELVAEGARSLEGTEVRLKHVDEA---TKED----VLWADGLAVGSPTN-MGLVSWKMKRFFD 76 (188)
T ss_dssp SHHHHHHHHHHHHHHTSTTEEEEEEETTTC---CHHH----HHHCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhcCCCeEEEEEhhhC---CHHH----HHhCCEEEEEeCcc-CCcCCHHHHHHHH
Confidence 4455566666777877 8889999887653 3222 23345444433322 4555555555553
No 154
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=35.35 E-value=11 Score=30.52 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=28.0
Q ss_pred eeCCcEEEEEechhHH-HHHHHHHHHHhcCCceEEEEee
Q 017695 236 REGKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 236 ~~g~di~Iia~G~~v~-~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
..+-|++||++|.... .--+..+.|+++||.++++|-+
T Consensus 62 ~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 100 (132)
T 2gm2_A 62 ALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTNA 100 (132)
T ss_dssp HHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECHH
T ss_pred hcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 3457999999997553 2234556788999999998654
No 155
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=35.29 E-value=1.3e+02 Score=28.40 Aligned_cols=60 Identities=7% Similarity=-0.007 Sum_probs=42.4
Q ss_pred EEEEec-hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHH-----HHHHHHhcC-CeEEEEeCCCC
Q 017695 242 TITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS-----TINASVRKT-NRLVTVEEGFP 301 (367)
Q Consensus 242 ~Iia~G-~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~-----~l~~~~~~~-~~ivvvEe~~~ 301 (367)
+|+++| ++..+.+.|++.+.+.|-++.++.+.+-+|-+.+ .|..+-+.+ +..|-.-+|..
T Consensus 138 viLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~ 204 (350)
T 3g8r_A 138 VVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHED 204 (350)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCC
Confidence 577888 5778999999999988888888777777775554 343333346 45566677874
No 156
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=34.89 E-value=26 Score=29.41 Aligned_cols=60 Identities=12% Similarity=0.236 Sum_probs=35.8
Q ss_pred HHHHHHHHHhcCCceEEEEeeecCCCC-----------HHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 253 SLKAAEILAKEGISAEVINLRSIRPLD-----------RSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 253 al~Aa~~L~~~Gi~v~vi~~~~i~P~d-----------~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
+..+++.++ .|.+++++|+..+..++ .+.+.+.+..++.||+.=.-+ .+++...+..++-
T Consensus 26 a~~i~~~l~-~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~y-~~~~p~~lK~~iD 96 (193)
T 1rtt_A 26 LQEAIGLVP-PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPEY-NYSMAGVLKNAID 96 (193)
T ss_dssp HHHHHTTCC-TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCEE-TTEECHHHHHHHH
T ss_pred HHHHHHhcc-CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcccc-ccCcCHHHHHHHH
Confidence 333344444 58889999987743332 234455677777776655433 4667666666653
No 157
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=34.32 E-value=1.6e+02 Score=22.69 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=57.5
Q ss_pred EEEEEechhHHHHHHHHHHHHh----cCCceEEEEeeec---CCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 241 VTITAFSKIVGLSLKAAEILAK----EGISAEVINLRSI---RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 241 i~Iia~G~~v~~al~Aa~~L~~----~Gi~v~vi~~~~i---~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
+.|.++++..-...-|++.|++ .|+++.|=--.+. .+++.+.|. ..+.||+.-+-.+. +.
T Consensus 6 vaVtaCptGiAhTymAAeaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~----~AD~VIia~d~~v~-~~-------- 72 (106)
T 2m1z_A 6 IAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVN----IGEVVIFAVDTKVR-NK-------- 72 (106)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHH----HCSEEEEEESSCCS-TH--------
T ss_pred EEEEECCCcHHHHHHHHHHHHHHHHHCCCEEEEEEecCccccCCCCHHHHh----hCCEEEEecccccc-ch--------
Confidence 4566677666555555555543 4888877544432 688888775 36777777664431 11
Q ss_pred HHhccCCCCCCeEEEecCCCCCCCHHHHHHHhCCCHHHHHHHHHHHHhhh
Q 017695 314 IEESFGYLDAPVERIAGADVPMPYAANLERMAVPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 314 ~~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l~~~~I~~~~i~~~l~~ 363 (367)
++ |. ..|+++++..+ ..-+++.++++ +.+++++
T Consensus 73 -~R-F~--gk~v~~~~v~~------------~i~~~~~~l~~-a~~~~~~ 105 (106)
T 2m1z_A 73 -ER-FD--GKVVLEVPVSA------------PIKDAEKVINA-ALALIDE 105 (106)
T ss_dssp -HH-HT--TSEEEEECTTH------------HHHCHHHHHHH-HHHHHTC
T ss_pred -hc-cC--CCcEEEEcHHH------------HHHCHHHHHHH-HHHHHhc
Confidence 11 21 35788877764 12478999999 8887764
No 158
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=34.30 E-value=22 Score=27.72 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=25.8
Q ss_pred eeCCcEEEEE-ech--hHHHHHHHHHHHHhcCCceEEE
Q 017695 236 REGKDVTITA-FSK--IVGLSLKAAEILAKEGISAEVI 270 (367)
Q Consensus 236 ~~g~di~Iia-~G~--~v~~al~Aa~~L~~~Gi~v~vi 270 (367)
++|+++++++ .|. +.....+.++.+++.|+++++|
T Consensus 77 ~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 77 EEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp HTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred HCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 5688999999 674 3345555666777789999886
No 159
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=33.26 E-value=1.7e+02 Score=27.56 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=46.7
Q ss_pred EEEEec-hhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHH-----HHHHHHhcC-CeEEEEeCCCCCCchHHHHHHHH
Q 017695 242 TITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS-----TINASVRKT-NRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 242 ~Iia~G-~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~-----~l~~~~~~~-~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
+|+++| ++..+...|++.+...|-++.+..+.+-+|-+.+ .|..+-+.+ +..|..-+|.. |..-.+++..
T Consensus 151 viLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~--G~~~~~AAvA 227 (349)
T 2wqp_A 151 IILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL--DNYACLGAVA 227 (349)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS--SSHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC--cHHHHHHHHH
Confidence 577999 4678999999999988887777766666665443 443333345 55556677763 4555555554
No 160
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=33.05 E-value=74 Score=31.74 Aligned_cols=144 Identities=9% Similarity=0.089 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHhh-CCcEEEEecCCCCcccccccchhHHHHhCCCceeechh--hHHHHHHHHHHHhcc-CCeeEEeccc
Q 017695 41 EALNSALDEEMSA-DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPI--TEAGFTGIGVGAAYY-GLKPVVEFMT 116 (367)
Q Consensus 41 ~a~~~~L~~l~~~-d~~vv~l~aDl~~~~g~~~~~~~~~~~~~p~R~i~~GI--aE~~~vg~AaGlA~~-G~~p~~~~~~ 116 (367)
..+.+.|.+.+.. +..++ +..|++.+. +.. ..+ .|.+|+..+- +=-..+..|.|+|++ .-++++++.
T Consensus 377 ~~v~~~l~~~l~~~~~~iv-~~~d~G~~~--~~~-~~~----~~~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~i~- 447 (565)
T 2nxw_A 377 MDIARAVNDRVRAGQEPLL-IAADMGDCL--FTA-MDM----IDAGLMAPGYYAGMGFGVPAGIGAQCVSGGKRILTVV- 447 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCE-EEECSSHHH--HHH-TTS----CCSCEECCTTTCCTTCHHHHHHHHHHHTTTCCEEEEE-
T ss_pred HHHHHHHHHhcccccCCEE-EEecchHHH--HHH-HhC----CCcEEEccCccccccccchHHHHHHHhCCCCcEEEEE-
Confidence 3455666666654 13343 234666431 110 111 2677775321 111256678888765 245666654
Q ss_pred ccHHH-HHHHHHHHHHhhccccCCCCccccEEEEe-C-CCCCC--C---CC---CCchhHHHHHHhcCCCcEEEeeCCHH
Q 017695 117 FNFSM-QAIDHIINSAAKSNYMSSGQISVPIVFRG-P-NGAAA--G---VG---AQHSHCYAAWYASVPGLKVLSPYSSE 185 (367)
Q Consensus 117 ~~f~~-ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~-~G~~~--g---~G---~tH~~~~~a~~~~iP~~~V~~P~d~~ 185 (367)
.+... ..+..+. .+. +.++|++++. . +|... . .+ ..|...+..+..++ |+..+...+.+
T Consensus 448 GDG~~~~~~~~l~-ta~--------~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~ 517 (565)
T 2nxw_A 448 GDGAFQMTGWELG-NCR--------RLGIDPIVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGM-GGDGVRVRTRA 517 (565)
T ss_dssp EHHHHHHHGGGGG-GHH--------HHTCCCEEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGG-TSEEEEECBHH
T ss_pred echHHHhhHHHHH-HHH--------HhCCCCEEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHc-CCCEEEeCCHH
Confidence 44332 1222221 112 2467765553 2 23221 0 01 11211233455555 67788889999
Q ss_pred HHHHHHHHhHcCCCcE-EE
Q 017695 186 DARGLLKAAIRDPDPV-VF 203 (367)
Q Consensus 186 e~~~~~~~a~~~~~Pv-~i 203 (367)
|+..+++++++.++|+ +|
T Consensus 518 el~~al~~a~~~~gp~~li 536 (565)
T 2nxw_A 518 ELKAALDKAFATRGRFQLI 536 (565)
T ss_dssp HHHHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 9999999999888887 55
No 161
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=33.00 E-value=1.9e+02 Score=23.17 Aligned_cols=107 Identities=11% Similarity=0.070 Sum_probs=61.8
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCceEEEEeeecCCCC--HHHHHHHHhc-----CC-eEEEEeCCCCCCchHHHHH
Q 017695 240 DVTITAFSK-IVGLSLKAAEILAKEGISAEVINLRSIRPLD--RSTINASVRK-----TN-RLVTVEEGFPQHGVGAEIC 310 (367)
Q Consensus 240 di~Iia~G~-~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d--~~~l~~~~~~-----~~-~ivvvEe~~~~GGlg~~v~ 310 (367)
.++|++.|. .+....++++.+-.+ -.+.-+|++-=...+ .+.+.+.+++ .+ .+|.+|- |.+.. ++
T Consensus 6 giiIvtHG~s~A~~l~~~a~~i~G~-~~~~aid~~~~~~~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm----GSp~n-~a 79 (139)
T 3gdw_A 6 GVFVLMHGDSTASSMLKTAQELLGT-SIGTAMNMPLTMEVQTMYEQLRNQVITQKESLNNGILLLTDM----GSLNS-FG 79 (139)
T ss_dssp EEEEEEESSSHHHHHHHHHHHHHTC-CCCEEEEECTTSCHHHHHHHHHHHHHTSTGGGTTCEEEEECS----GGGGG-HH
T ss_pred eEEEEcCCHHHHHHHHHHHHHHcCc-ccEEEEEccCCCCHHHHHHHHHHHHHhhcCCCCCCEEEEEeC----CCHHH-HH
Confidence 488999999 888889999987655 567777665322222 2445666654 22 4555565 44432 34
Q ss_pred HHHHHhccCCCCCCeEEEecCCCCCCCHHHH-HHHhCCCHHHHHHHHHH
Q 017695 311 ASVIEESFGYLDAPVERIAGADVPMPYAANL-ERMAVPQVLCFLYDSSI 358 (367)
Q Consensus 311 ~~l~~~~~~~~~~~v~~ig~~d~~~~~~~~l-~~~~~l~~~~I~~~~i~ 358 (367)
..+.+.. ..++..+.....+.-. +.. ......+-++|++. +.
T Consensus 80 ~~l~~~~----~~~v~vI~gvnlpmll-ea~~~~~~~~~L~el~~~-~~ 122 (139)
T 3gdw_A 80 NMLFEET----GIRTKAITMTSTMIVL-EAIRMASVGRSLEDIYQN-IQ 122 (139)
T ss_dssp HHHHHHH----CCCEEEECSCCHHHHH-HHHHHHHTTCCHHHHHHH-HH
T ss_pred HHHHHhh----CCCEEEEeCCCHHHHH-HHHHHhhcCCCHHHHHHH-HH
Confidence 4444331 2356666665422111 222 12346789999988 74
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=32.82 E-value=49 Score=26.09 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=24.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
.+++|+++|.+-.. .++.|.+.|+++.++|..
T Consensus 8 ~~viIiG~G~~G~~---la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSL---LGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHH---HHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEECC
Confidence 46899999987664 455688889999999853
No 163
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=32.46 E-value=93 Score=29.85 Aligned_cols=56 Identities=16% Similarity=0.290 Sum_probs=38.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee---------------ecCCCCHHHHHHH-HhcCCeEEEE
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR---------------SIRPLDRSTINAS-VRKTNRLVTV 296 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~---------------~i~P~d~~~l~~~-~~~~~~ivvv 296 (367)
+.+++|+++|..-.. .++.|.++|+++.+||.. .-.+-+.+.|.++ +.+.+.+|+.
T Consensus 4 ~~~viIiG~Gr~G~~---va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQI---TGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHH---HHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHH---HHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 456999999986664 456788899999999953 1244566766654 5566655543
No 164
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=31.72 E-value=1.4e+02 Score=24.60 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHHHhcC--CceEEEEeeec--CCCCH------------------------HHHHHHHhcCCeEEEEeCC
Q 017695 248 KIVGLSLKAAEILAKEG--ISAEVINLRSI--RPLDR------------------------STINASVRKTNRLVTVEEG 299 (367)
Q Consensus 248 ~~v~~al~Aa~~L~~~G--i~v~vi~~~~i--~P~d~------------------------~~l~~~~~~~~~ivvvEe~ 299 (367)
.+-..+...++.|++.| .+++++|+... .+++. +.+.+.+..++.||+.=.-
T Consensus 17 ~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~~P~ 96 (201)
T 1t5b_A 17 QSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAPM 96 (201)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEECCC
T ss_pred hHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEeCc
Confidence 33444555667787776 89999998763 22321 2345567778887776554
Q ss_pred CCCCchHHHHHHHHH
Q 017695 300 FPQHGVGAEICASVI 314 (367)
Q Consensus 300 ~~~GGlg~~v~~~l~ 314 (367)
+ .+++...+..++-
T Consensus 97 y-~~~~p~~lK~~iD 110 (201)
T 1t5b_A 97 Y-NFNIPTQLKNYFD 110 (201)
T ss_dssp B-TTBCCHHHHHHHH
T ss_pred c-cCcCCHHHHHHHH
Confidence 3 5778777777663
No 165
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=31.47 E-value=38 Score=29.75 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=36.8
Q ss_pred cEEEEEechhHHHHHHHHHHHHh---cCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCC
Q 017695 240 DVTITAFSKIVGLSLKAAEILAK---EGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQH 303 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~---~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~G 303 (367)
.-++|-||++...+.+.|+.|.+ .|+++.|+++.... .+. +.+.+.+|++=..+-.|
T Consensus 41 ~kv~IlYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~~---~~~----l~~~~~vI~~tsTyG~G 100 (219)
T 3hr4_A 41 VRVTILFATETGKSEALAWDLGALFSCAFNPKVVCMDKYR---LSC----LEEERLLLVVTSTFGNG 100 (219)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGCC---GGG----GGTCSEEEEEEECBTTT
T ss_pred CcEEEEEECCchHHHHHHHHHHHHHHcCCCeEEEEcccCC---HhH----hccCCeEEEEEeccCCC
Confidence 34566799999888888887754 48888888776543 222 23556666665544344
No 166
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=30.99 E-value=1.6e+02 Score=26.52 Aligned_cols=41 Identities=7% Similarity=0.107 Sum_probs=25.7
Q ss_pred eecCCCCHHHHHHHHhcCCeEEEEeCCC-----CCCchHHHHHHHHH
Q 017695 273 RSIRPLDRSTINASVRKTNRLVTVEEGF-----PQHGVGAEICASVI 314 (367)
Q Consensus 273 ~~i~P~d~~~l~~~~~~~~~ivvvEe~~-----~~GGlg~~v~~~l~ 314 (367)
..+-+++.+.+.+.++..+.+|. -... ...|++..+.++++
T Consensus 256 ~~~g~~~~~~~~~~~~~ad~~v~-ps~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 256 KFLGRLEYQDMINTLAAADIFAM-PARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEE-CCCCBGGGTBCCSSCHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHhCCEEEe-cCccccccccccccCcHHHHHHH
Confidence 34556777888888888875443 2221 01466777888875
No 167
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=30.44 E-value=37 Score=34.92 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.0
Q ss_pred HHhcCCCcEEEeeCCHHHHHHHHHHhHcCCCcEEEe
Q 017695 169 WYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (367)
Q Consensus 169 ~~~~iP~~~V~~P~d~~e~~~~~~~a~~~~~Pv~ir 204 (367)
.++.+|.. |+.|.|.+|+..++++|.+++-|++.|
T Consensus 201 ~~~~~P~a-VV~P~s~eeV~~iv~~A~~~~ipVvpr 235 (658)
T 4bby_A 201 MFERIPDI-VLWPTCHDDVVKIVNLACKYNLCIIPI 235 (658)
T ss_dssp CCSCCCSE-EEECCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCcCE-EEeeCCHHHHHHHHHHHHHCCCeEEEE
Confidence 45568866 899999999999999999988888776
No 168
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=30.34 E-value=80 Score=29.37 Aligned_cols=68 Identities=9% Similarity=0.176 Sum_probs=41.4
Q ss_pred EEEEechhH----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 242 TITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 242 ~Iia~G~~v----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
++|.++++. ..|...++.|.+.|++++++++. ..+.+.+.+.+.+++.+++.-..+ .+|.-..+.+++
T Consensus 254 i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~g~p~y-~~~~~~~~~~~l 325 (398)
T 1ycg_A 254 AVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS---VSDRNDVIKEILDARAVLVGSPTI-NNDILPVVSPLL 325 (398)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG---GSCHHHHHHHHHHCSEEEEECCCB-TTBCCGGGHHHH
T ss_pred EEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECCcc-CccchHHHHHHH
Confidence 445565544 45555566677779999988765 456666666677787777664433 354444444444
No 169
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=30.19 E-value=1.3e+02 Score=28.05 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=40.1
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeec-------------CCCCHHHHHHHHhcCCeEEEEeC
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI-------------RPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i-------------~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
.++.+.|++.|.......++ +++.|+++-++|..-- ...|.+.+.+.+++.+ +|+.|-
T Consensus 11 ~~~~IlIlG~G~lg~~la~a---a~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~d-vi~~~~ 81 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQS---AQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCD-VITYEF 81 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHH---HHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCS-EEEESS
T ss_pred CCCEEEEECCCHHHHHHHHH---HHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCC-cceecc
Confidence 46779999999876655444 4555999999986422 2246778888888776 456654
No 170
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=30.02 E-value=1e+02 Score=28.77 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=42.0
Q ss_pred chhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
|++-..|..+++.|++.|++++++++. ..+.+.+.+.+.+++.||+.=. ...|++...+..++
T Consensus 268 gnT~~la~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~l~~~d~iiigsP-~y~~~~~~~~k~~l 330 (404)
T 2ohh_A 268 GSTRKMAHAIAEGAMSEGVDVRVYCLH---EDDRSEIVKDILESGAIALGAP-TIYDEPYPSVGDLL 330 (404)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECC-EETTEECTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECc-cccccchHHHHHHH
Confidence 334456666677777789999888764 4566777777888887776544 33466655666655
No 171
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=29.72 E-value=1.4e+02 Score=28.04 Aligned_cols=64 Identities=8% Similarity=0.095 Sum_probs=42.0
Q ss_pred chhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 247 G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
|++-..|...++.|++.|++++++++.. .+.+.+.+.+.+++.||+.=.- ..|++...+..++.
T Consensus 268 GnT~~la~~i~~~l~~~g~~v~~~~l~~---~~~~~~~~~l~~~D~iiigsP~-y~~~~~~~~k~fld 331 (414)
T 2q9u_A 268 GTTHRMALALLDGARSTGCETVLLEMTS---SDITKVALHTYDSGAVAFASPT-LNNTMMPSVAAALN 331 (414)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEEGGG---CCHHHHHHHHHTCSEEEEECCC-BTTBCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEcCc---CCHHHHHHHHHhCCEEEEEcCc-cCcCchHHHHHHHH
Confidence 4445566666777777899999998764 3555555667777776665443 35676666666654
No 172
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=29.52 E-value=75 Score=26.62 Aligned_cols=46 Identities=9% Similarity=0.057 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhc--CCeEEEEeCC
Q 017695 252 LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK--TNRLVTVEEG 299 (367)
Q Consensus 252 ~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~--~~~ivvvEe~ 299 (367)
...++++.|++.|+.+-.|-+- ...|.+.|.+.+.. .++++.+++-
T Consensus 134 ~~~~~a~~l~~~gi~i~~igvG--~~~~~~~L~~iA~~~~~~~~~~~~~~ 181 (202)
T 1ijb_A 134 NFVRYVQGLKKKKVIVIPVGIG--PHANLKQIRLIEKQAPENKAFVLSSV 181 (202)
T ss_dssp THHHHHHHHHHTTEEEEEEEES--TTSCHHHHHHHHHHCTTCCCEEESSG
T ss_pred HHHHHHHHHHHCCCEEEEEecC--CcCCHHHHHHHhCCCCcccEEEeCCH
Confidence 4567788888888776666544 24788888777653 3567777754
No 173
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=29.52 E-value=1.6e+02 Score=27.32 Aligned_cols=69 Identities=10% Similarity=0.197 Sum_probs=42.0
Q ss_pred EEEEechhHH----HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHH
Q 017695 242 TITAFSKIVG----LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 242 ~Iia~G~~v~----~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
++|.++++.. .|...++.|++.|+.++++++. ..+.+.+.+.+.+++.+|+.-. ...++.-..+.+++.
T Consensus 255 v~i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~gsp-~~~~~~~~~~~~~l~ 327 (402)
T 1e5d_A 255 VVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK---ACHHSQIMSEISDAGAVIVGSP-THNNGILPYVAGTLQ 327 (402)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECC-CBTTBCCHHHHHHHH
T ss_pred EEEEEECCChhHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECC-ccCCCchHHHHHHHH
Confidence 3445555443 3445556677778888888764 4566666666777877665544 334555555665554
No 174
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=29.48 E-value=99 Score=25.93 Aligned_cols=85 Identities=15% Similarity=-0.033 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHhHcCCCcEEEeccccccCCCCCccccccCCCcccc-CCc---EEEeeeCCcEEEEEechhHHHHHHHHH
Q 017695 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLP-IGK---AKIEREGKDVTITAFSKIVGLSLKAAE 258 (367)
Q Consensus 183 d~~e~~~~~~~a~~~~~Pv~ir~~~~~~~~~~~~~~~~~~~~~~~~-~Gk---~~v~~~g~di~Iia~G~~v~~al~Aa~ 258 (367)
+-+++.+++-+|+..++-+|+.-.. +.-.+..+......+++ .++ ..-++++..+.|++....-..+.+.|.
T Consensus 23 ~I~~AA~llaqai~~~g~IyvfG~G----hs~~~~~e~~~~~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~ 98 (170)
T 3jx9_A 23 ELFDVVRLLAQALVGQGKVYLDAYG----EFEGLYPMLSDGPDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLA 98 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECG----GGGGGTHHHHTSTTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCC----cHHHHHHHHHcccCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 3467888888999999999986211 00000000000000000 000 113456666777777766677889999
Q ss_pred HHHhcCCceEEEE
Q 017695 259 ILAKEGISAEVIN 271 (367)
Q Consensus 259 ~L~~~Gi~v~vi~ 271 (367)
.++++|+.+-.|-
T Consensus 99 ~ake~G~~vIaIT 111 (170)
T 3jx9_A 99 RYDAWHTPYSIIT 111 (170)
T ss_dssp HHHHHTCCEEEEE
T ss_pred HHHHCCCcEEEEe
Confidence 9999987766553
No 175
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=29.39 E-value=58 Score=26.53 Aligned_cols=50 Identities=4% Similarity=-0.065 Sum_probs=36.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCC-CCHHHHHHH
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRP-LDRSTINAS 286 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P-~d~~~l~~~ 286 (367)
+.+++++|+-|+.+-..+..++.|.++|-++.++..++-.- +-.+.|.+.
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEKA 72 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEEEECBGGGCCSHHHHHHH
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHHH
Confidence 45689999999999998888888887788888885555432 334556553
No 176
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=29.27 E-value=1.7e+02 Score=27.51 Aligned_cols=57 Identities=14% Similarity=0.225 Sum_probs=38.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeee---------------cCCCCHHHHHHHHhcCCeEEEEeC
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS---------------IRPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~---------------i~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
++.++.|+.-|.......+|++ +.|+++-++| .. ....|.+.|.+.+++.+ +++.|-
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~---~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d-~i~~e~ 94 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESAN---RLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCD-VVTAEI 94 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH---HHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCS-EEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHH---HCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCC-EEEECC
Confidence 4567899998876665555544 4599999998 32 12246778888888876 566654
No 177
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=28.35 E-value=74 Score=27.07 Aligned_cols=56 Identities=16% Similarity=0.264 Sum_probs=34.5
Q ss_pred HHHHHHhcCCceE-EEEeeecCCCCH-----------HHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 256 AAEILAKEGISAE-VINLRSIRPLDR-----------STINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 256 Aa~~L~~~Gi~v~-vi~~~~i~P~d~-----------~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
+++.+ ++|.+++ ++|+.-+-.++. +.+.+.++..+.+|++=.-+ .+++...+..++
T Consensus 29 ~~~~~-~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP~Y-~~s~p~~LK~~i 96 (199)
T 4hs4_A 29 LPEIA-PEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTPEY-NYSVPGVLKNAI 96 (199)
T ss_dssp HHHHC-CTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEECCB-TTBCCHHHHHHH
T ss_pred HHHHc-cCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcCcc-CCCcCHHHHHHH
Confidence 33334 4588899 888876522332 34566677788776665544 467766666555
No 178
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=27.91 E-value=64 Score=29.39 Aligned_cols=62 Identities=15% Similarity=0.056 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhcCCceEEEEeeecCC----------------------------------CCHHHHHHHHhcCCeEEEE
Q 017695 251 GLSLKAAEILAKEGISAEVINLRSIRP----------------------------------LDRSTINASVRKTNRLVTV 296 (367)
Q Consensus 251 ~~al~Aa~~L~~~Gi~v~vi~~~~i~P----------------------------------~d~~~l~~~~~~~~~ivvv 296 (367)
..+..+++.|++.|.+|+++|+...++ .|.+...+.+...+.||++
T Consensus 40 aL~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~aD~iv~~ 119 (280)
T 4gi5_A 40 ALKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWADTVIFQ 119 (280)
T ss_dssp HHHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhCCEEEEE
Confidence 344566778999999999999964332 1223344556778887776
Q ss_pred eCCCCCCchHHHHHHHH
Q 017695 297 EEGFPQHGVGAEICASV 313 (367)
Q Consensus 297 Ee~~~~GGlg~~v~~~l 313 (367)
=.-+ .+++-..+...+
T Consensus 120 ~P~~-w~~~Pa~lK~~i 135 (280)
T 4gi5_A 120 FPLW-WFSMPAIMKGWI 135 (280)
T ss_dssp EECB-TTBCCHHHHHHH
T ss_pred eccc-cccCcHHHHHHH
Confidence 6544 456666665555
No 179
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=27.79 E-value=43 Score=30.62 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=36.3
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||+.|..+... ++..|..+|..|++.+-++ +.+.+.+++.+-||+
T Consensus 149 ~Gk~vvVvG~s~iVG~p--lA~lL~~~gAtVtv~~~~t------~~L~~~~~~ADIVI~ 199 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRP--LSMMLLNRNYTVSVCHSKT------KDIGSMTRSSKIVVV 199 (276)
T ss_dssp CSCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHHHSSEEEE
T ss_pred CCCEEEEEcCChHHHHH--HHHHHHHCCCeEEEEeCCc------ccHHHhhccCCEEEE
Confidence 68999999999877654 4456777888888887544 335566777775554
No 180
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=27.77 E-value=1.3e+02 Score=25.20 Aligned_cols=65 Identities=11% Similarity=0.086 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHhcC--CceEEEEee--ec--CCCCHH-----------------------------HHHHHHhcCCeE
Q 017695 249 IVGLSLKAAEILAKEG--ISAEVINLR--SI--RPLDRS-----------------------------TINASVRKTNRL 293 (367)
Q Consensus 249 ~v~~al~Aa~~L~~~G--i~v~vi~~~--~i--~P~d~~-----------------------------~l~~~~~~~~~i 293 (367)
+-..+...++.|++.| .+++++|+. .. .+++.+ .+.+.+..++.|
T Consensus 19 t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aD~i 98 (208)
T 2hpv_A 19 SVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADKV 98 (208)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHHhCCEE
Confidence 3344455677788877 999999998 53 344322 244556678877
Q ss_pred EEEeCCCCCCchHHHHHHHHH
Q 017695 294 VTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 294 vvvEe~~~~GGlg~~v~~~l~ 314 (367)
|+.=.-+ .+++...+..++-
T Consensus 99 v~~~P~y-~~~~pa~lK~~iD 118 (208)
T 2hpv_A 99 VIANPMW-NLNVPTRLKAWVD 118 (208)
T ss_dssp EEEEECB-TTBCCHHHHHHHH
T ss_pred EEEeccc-cCCCCHHHHHHHH
Confidence 6655533 5788887777763
No 181
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=27.46 E-value=21 Score=29.63 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=27.1
Q ss_pred CCcEEEEEechhHH-HHHHHHHHHHhcCCceEEEEee
Q 017695 238 GKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 238 g~di~Iia~G~~v~-~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
.-+++||++|...+ ..-+..+.|++.||.++++|-.
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~ 124 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQ 124 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 56899999997553 2334566789999999998644
No 182
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=27.38 E-value=96 Score=29.63 Aligned_cols=59 Identities=12% Similarity=0.019 Sum_probs=38.8
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee-------------ecCCCCHHHHHHHHhcCCeEEEEeC
Q 017695 236 REGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR-------------SIRPLDRSTINASVRKTNRLVTVEE 298 (367)
Q Consensus 236 ~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~-------------~i~P~d~~~l~~~~~~~~~ivvvEe 298 (367)
.+++++.|+.-|........| +++.|+++-++|.. .....|.+.|.+.+++.+. |+.|-
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~a---a~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~-V~~~~ 104 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFA---AQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEA-VSTEF 104 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHH---HHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSE-EEECC
T ss_pred CCCCEEEEECCCHHHHHHHHH---HHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCE-EEEcc
Confidence 357789999988765555444 44559999888753 1123467788888876664 44553
No 183
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=27.38 E-value=94 Score=27.07 Aligned_cols=64 Identities=17% Similarity=0.163 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhcCCceEEEEeeecC--CC-------------------------------CH--HHHHHHHhcCCeEE
Q 017695 250 VGLSLKAAEILAKEGISAEVINLRSIR--PL-------------------------------DR--STINASVRKTNRLV 294 (367)
Q Consensus 250 v~~al~Aa~~L~~~Gi~v~vi~~~~i~--P~-------------------------------d~--~~l~~~~~~~~~iv 294 (367)
...+..+++.|+++|.+|+++|+.... |. +. ..+.+.++.++.||
T Consensus 18 ~~l~~~~~~~l~~~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~~~~~~l~~aD~iv 97 (228)
T 3tem_A 18 GSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVI 97 (228)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHHHHHHHHHhCCEEE
Confidence 445556677888889999999996542 21 12 22345577788777
Q ss_pred EEeCCCCCCchHHHHHHHHH
Q 017695 295 TVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 295 vvEe~~~~GGlg~~v~~~l~ 314 (367)
+.=.-+ .+++-..+...+-
T Consensus 98 ~~~P~y-~~~~p~~lK~~iD 116 (228)
T 3tem_A 98 FQFPLY-WFSVPAILKGWMD 116 (228)
T ss_dssp EEEECB-TTBCCHHHHHHHH
T ss_pred EECChh-hcccCHHHHHHHH
Confidence 665543 4777777776663
No 184
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=27.36 E-value=1.8e+02 Score=27.73 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=47.7
Q ss_pred EEEEEec-hhHHHHHHHHHHHHhcCC-ceEEEEeeecCCCCHH-----HHHHHHhcC-CeEEEEeCCCCCCc-hHHHHHH
Q 017695 241 VTITAFS-KIVGLSLKAAEILAKEGI-SAEVINLRSIRPLDRS-----TINASVRKT-NRLVTVEEGFPQHG-VGAEICA 311 (367)
Q Consensus 241 i~Iia~G-~~v~~al~Aa~~L~~~Gi-~v~vi~~~~i~P~d~~-----~l~~~~~~~-~~ivvvEe~~~~GG-lg~~v~~ 311 (367)
=+|+++| ++..+..+|++.+++.|. ++.+..+.+-+|-+.+ .|..+-+.+ +..|..-+|.. | ..-.+++
T Consensus 160 PViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~--G~~~~~~AA 237 (385)
T 1vli_A 160 PMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE--HPTEAPCAA 237 (385)
T ss_dssp CEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS--SSSHHHHHH
T ss_pred eEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC--CchHHHHHH
Confidence 3678999 467899999999998886 8888877777776544 343333345 45556777763 4 5555555
Q ss_pred HH
Q 017695 312 SV 313 (367)
Q Consensus 312 ~l 313 (367)
+.
T Consensus 238 vA 239 (385)
T 1vli_A 238 VR 239 (385)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 185
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=27.29 E-value=27 Score=34.91 Aligned_cols=27 Identities=7% Similarity=-0.004 Sum_probs=21.7
Q ss_pred EEeeCCHHHHHHHHH-HhHcCC-CcEEEe
Q 017695 178 VLSPYSSEDARGLLK-AAIRDP-DPVVFL 204 (367)
Q Consensus 178 V~~P~d~~e~~~~~~-~a~~~~-~Pv~ir 204 (367)
.+...+.+|+..+++ .+++.+ +|++|-
T Consensus 509 ~~~v~~~~el~~al~~~a~~~~~~p~lie 537 (563)
T 2vk8_A 509 THRVATTGEWDKLTQDKSFNDNSKIRMIE 537 (563)
T ss_dssp EEEECBHHHHHHHHTCTTTTSCSSEEEEE
T ss_pred EEEecCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 677789999999999 788755 688873
No 186
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=27.22 E-value=87 Score=25.26 Aligned_cols=64 Identities=16% Similarity=0.147 Sum_probs=36.7
Q ss_pred EEEEechhHHHHHHHHHHHHhc-CCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 242 TITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 242 ~Iia~G~~v~~al~Aa~~L~~~-Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
++|.|+++.....+.|+.+.+. |. ++++++.. .+.+. +.+++.|++.=.-+-.|-+-..+..++
T Consensus 4 ~~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~~---~~~~~----l~~~d~ii~g~pt~~~g~~p~~~~~f~ 68 (164)
T 2bmv_A 4 IGIFFGTDSGNAEAIAEKISKAIGN-AEVVDVAK---ASKEQ----FNSFTKVILVAPTAGAGDLQTDWEDFL 68 (164)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHCS-EEEEEGGG---CCHHH----HTTCSEEEEEEEEETTTEECHHHHHHH
T ss_pred EEEEEECCCchHHHHHHHHHHHcCC-cEEEeccc---CCHhH----HhhCCEEEEEECCcCCCcCcHHHHHHH
Confidence 3566888888888888887664 66 67766543 33332 335666665433222232444455554
No 187
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=27.08 E-value=57 Score=30.91 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=23.2
Q ss_pred CCCcEEEeeCCHHHHHHHHHHhHc----CCCcEEEe
Q 017695 173 VPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFL 204 (367)
Q Consensus 173 iP~~~V~~P~d~~e~~~~~~~a~~----~~~Pv~ir 204 (367)
+|++.| .-.|+.++..+++.|++ .++|++|-
T Consensus 224 ~p~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe 258 (365)
T 2ozl_A 224 IPGLRV-DGMDILCVREATRFAAAYCRSGKGPILME 258 (365)
T ss_dssp SCEEEE-ETTCHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEE-eCCCHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 565543 44589999999988874 58899984
No 188
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=26.65 E-value=60 Score=25.51 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=29.7
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhcCC-ceEEEEee
Q 017695 238 GKDVTITAFSK----IVGLSLKAAEILAKEGI-SAEVINLR 273 (367)
Q Consensus 238 g~di~Iia~G~----~v~~al~Aa~~L~~~Gi-~v~vi~~~ 273 (367)
..+++|++-|+ .+..+.+|.+.|.+.|+ ....+|+.
T Consensus 19 ~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~ 59 (118)
T 2wul_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVL 59 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETT
T ss_pred cCCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeeccc
Confidence 45799999885 67889999999999998 58888874
No 189
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=26.60 E-value=40 Score=28.22 Aligned_cols=39 Identities=21% Similarity=0.268 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 255 KAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 255 ~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
.|.+.|++.||+.. -..-++++.+.+. ..+.||++++.+
T Consensus 68 ~a~~vl~e~Gid~s---~~~sr~l~~~~~~----~~DlIitM~~~~ 106 (167)
T 2fek_A 68 TAISVAAEHQLSLE---GHCARQISRRLCR----NYDLILTMEKRH 106 (167)
T ss_dssp HHHHHHHHTTCCCT---TCCCCBCCHHHHH----HSSEEEESCHHH
T ss_pred HHHHHHHHcCCCcc---CCcCccCCHHHhc----cCCEEEEcCHHH
Confidence 35566788899764 2356778877654 478999998864
No 190
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=25.97 E-value=61 Score=26.75 Aligned_cols=53 Identities=8% Similarity=0.105 Sum_probs=33.8
Q ss_pred cEEEEEechhH-H----HHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 240 DVTITAFSKIV-G----LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 240 di~Iia~G~~v-~----~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
++.+-+.|... + .--.|.+.|++.||+. + +.-++++.+.+. ..+.||++++.+
T Consensus 37 ~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~---~-~~ar~l~~~~~~----~~DlIl~Md~~~ 94 (161)
T 3jvi_A 37 KYICDSAGTCSYHEGQQADSRMRKVGKSRGYQV---D-SISRPVVSSDFK----NFDYIFAMDNDN 94 (161)
T ss_dssp GEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCC---C-CBCCBCCHHHHH----HCSEEEESSHHH
T ss_pred cEEEEeeecCCcccCCCCCHHHHHHHHHcCcCC---C-CeeeECCHHHhc----CCCEEEEeChHH
Confidence 34555555433 1 1234566788889986 3 456888887654 478999998854
No 191
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=25.73 E-value=1.1e+02 Score=26.85 Aligned_cols=47 Identities=13% Similarity=0.117 Sum_probs=33.5
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHH
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINAS 286 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~ 286 (367)
.+++++||.-|.. ++|.|..|.+.|.+|+|+....-...+.+...+.
T Consensus 151 ~~~~vvViGgG~i---g~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~ 197 (314)
T 4a5l_A 151 RNKVLMVVGGGDA---AMEEALHLTKYGSKVIILHRRDAFRASKTMQERV 197 (314)
T ss_dssp TTSEEEEECSSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHH
T ss_pred CCCeEEEECCChH---HHHHHHHHHHhCCeeeeecccccccccchhhhhh
Confidence 3678999998864 6677888988999999997554444455444333
No 192
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=25.72 E-value=4.1e+02 Score=25.54 Aligned_cols=109 Identities=10% Similarity=0.076 Sum_probs=56.8
Q ss_pred CCcEEEEE-echhHHHHHHHHHHHHhcCCc-eEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHHHH
Q 017695 238 GKDVTITA-FSKIVGLSLKAAEILAKEGIS-AEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASVIE 315 (367)
Q Consensus 238 g~di~Iia-~G~~v~~al~Aa~~L~~~Gi~-v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l~~ 315 (367)
+..++|++ .|.......+ ..++.|++ -.|+ ++-..+.+.+.+.....+. ++. -+ .. |+|--+.+.++.
T Consensus 406 ~~~l~i~G~~g~~~~~l~~---~~~~~~l~~~~v~---~~g~~~~~~~~~~~~~adv-~v~-ps-~~-~~g~~~lEAma~ 475 (568)
T 2vsy_A 406 DSVLWLLSGPGEADARLRA---FAHAQGVDAQRLV---FMPKLPHPQYLARYRHADL-FLD-TH-PY-NAHTTASDALWT 475 (568)
T ss_dssp TCEEEEECCSTTHHHHHHH---HHHHTTCCGGGEE---EECCCCHHHHHHHGGGCSE-EEC-CS-SS-CCSHHHHHHHHT
T ss_pred CcEEEEecCCHHHHHHHHH---HHHHcCCChhHEE---eeCCCCHHHHHHHHhcCCE-Eee-CC-CC-CCcHHHHHHHhC
Confidence 34566666 5554433333 33445665 3333 4456677777788887774 333 32 23 677778888752
Q ss_pred hccCCCCCCeEEEecCCCCCCCHHHHHHHhCC------CHHHHHHHHHHHHhhh
Q 017695 316 ESFGYLDAPVERIAGADVPMPYAANLERMAVP------QVLCFLYDSSIDGCYK 363 (367)
Q Consensus 316 ~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~~l------~~~~I~~~~i~~~l~~ 363 (367)
..|++.+.........+..+....++ |+++++++ +.+++.+
T Consensus 476 ------G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~~~~~la~~-i~~l~~~ 522 (568)
T 2vsy_A 476 ------GCPVLTTPGETFAARVAGSLNHHLGLDEMNVADDAAFVAK-AVALASD 522 (568)
T ss_dssp ------TCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCSSHHHHHHH-HHHHHHC
T ss_pred ------CCCEEeccCCCchHHHHHHHHHHCCChhhhcCCHHHHHHH-HHHHhcC
Confidence 34664422211111112111111222 78888888 8877753
No 193
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=25.68 E-value=1e+02 Score=28.56 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=24.0
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCC-ceEEEEee
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGI-SAEVINLR 273 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi-~v~vi~~~ 273 (367)
+|+.++|++.|.+ +..++..|.+.|. ++.|++-.
T Consensus 153 ~gk~~lVlGaGG~---g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGA---ATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHH---HHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChH---HHHHHHHHHHCCCCEEEEEECC
Confidence 3677888888844 4445666778898 78887644
No 194
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=25.46 E-value=1.4e+02 Score=20.21 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=40.2
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC-eEEEEeCCCCCCchHHHHHHHHH
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN-RLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~-~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
++++++. .....|.++...|++.|++...+|+.. .|-..+.+.+...... .++++ ++...||+ ..+.+.+.
T Consensus 2 ~i~~y~~-~~C~~C~~~~~~l~~~~i~~~~~~i~~-~~~~~~~~~~~~~~~~vP~l~~-~g~~i~g~-~~i~~~~~ 73 (82)
T 1fov_A 2 NVEIYTK-ETCPYCHRAKALLSSKGVSFQELPIDG-NAAKREEMIKRSGRTTVPQIFI-DAQHIGGY-DDLYALDA 73 (82)
T ss_dssp CEEEEEC-SSCHHHHHHHHHHHHHTCCCEEEECTT-CSHHHHHHHHHHSSCCSCEEEE-TTEEEESH-HHHHHHHH
T ss_pred cEEEEEC-CCChhHHHHHHHHHHCCCCcEEEECCC-CHHHHHHHHHHhCCCCcCEEEE-CCEEEeCH-HHHHHHHH
Confidence 3555543 455677888888988899999998863 1111122333322222 35555 44556775 44555553
No 195
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=25.37 E-value=82 Score=29.08 Aligned_cols=51 Identities=24% Similarity=0.378 Sum_probs=36.1
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHH--HHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTIN--ASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~--~~~~~~~~ivv 295 (367)
+|++++||..|..+... ++..|..+|..|++.+-++- .+. +.+++.+-||+
T Consensus 164 ~Gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~~~~T~------~l~l~~~~~~ADIVI~ 216 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAP--VAALLMKENATVTIVHSGTS------TEDMIDYLRTADIVIA 216 (300)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTSC------HHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCchHHHH--HHHHHHHCCCeEEEEeCCCC------CchhhhhhccCCEEEE
Confidence 57899999988877655 44567778888888876542 233 67777875554
No 196
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=24.87 E-value=2.5e+02 Score=21.99 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=63.1
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCC--HHHHHHHHhcC---CeEEEEeCCCCCCchHHHHHHHHH
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLD--RSTINASVRKT---NRLVTVEEGFPQHGVGAEICASVI 314 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d--~~~l~~~~~~~---~~ivvvEe~~~~GGlg~~v~~~l~ 314 (367)
.++|++.|..+...+++++.+-.+--.+..+++..=...+ .+.+.+.+++. +.++++=|= .||--..++..+.
T Consensus 3 ~iii~sHG~~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~~~~~i~~~i~~~~~~~gvliLtDl--~GGSp~n~a~~~~ 80 (135)
T 1pdo_A 3 AIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYNAQLAKLDTTKGVLFLVDT--WGGSPFNAASRIV 80 (135)
T ss_dssp EEEEECSBTHHHHHHHHHHHHHCCCSSEEEECBCTTCCHHHHHHHHHHHHTTSCCTTCEEEEESS--TTSHHHHHHHHHH
T ss_pred eEEEEeChHHHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHHHHHHHHHHHHhcCCCCCEEEEEEC--CCCCHHHHHHHHH
Confidence 4789999998899999999885443466666654222211 23456666654 345555552 3553333343343
Q ss_pred HhccCCCCCCeEEEecCCCCCCCHHHHHHHh-CCCHHHHHHHHHHHHhhh
Q 017695 315 EESFGYLDAPVERIAGADVPMPYAANLERMA-VPQVLCFLYDSSIDGCYK 363 (367)
Q Consensus 315 ~~~~~~~~~~v~~ig~~d~~~~~~~~l~~~~-~l~~~~I~~~~i~~~l~~ 363 (367)
.. ..++.-++.-+.+.= =+.+.... ..+.+++++. +.+.-++
T Consensus 81 ~~-----~~~v~vi~GvNlpml-le~~~~~~~~~~l~el~~~-~~~~g~~ 123 (135)
T 1pdo_A 81 VD-----KEHYEVIAGVNIPML-VETLMARDDDPSFDELVAL-AVETGRE 123 (135)
T ss_dssp TT-----CTTEEEEESCCHHHH-HHHHHHHTTCCCHHHHHHH-HHHHHHH
T ss_pred hc-----cCCEEEEeCCCHHHH-HHHHHhcccCCCHHHHHHH-HHHHhhH
Confidence 22 235666665442210 01112221 5678888888 7765554
No 197
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=24.86 E-value=77 Score=25.85 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=33.2
Q ss_pred EEechhH----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCCCCchHHHHHHHH
Q 017695 244 TAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 244 ia~G~~v----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~~GGlg~~v~~~l 313 (367)
|.|+++. ..|...++.|.+.|+++.++++....+ +. +.+.+.|++.=.-+-.|.+-..+..++
T Consensus 14 I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~---~~----l~~~d~ii~g~pt~g~G~~p~~~~~f~ 80 (167)
T 1ykg_A 14 IISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKF---KQ----IASEKLLIVVTSTQGEGEPPEEAVALH 80 (167)
T ss_dssp EEEECSSSHHHHHHHHHHHHHHHHTCCCEEEEGGGCCG---GG----GGGCSEEEEEEECBGGGBCCGGGHHHH
T ss_pred EEEECCchHHHHHHHHHHHHHHHCCCceEEeehhhCCH---HH----hccCCeEEEEEcccCCCcCChhHHHHH
Confidence 3455544 444455556666799999988765432 21 345666655444332343434344444
No 198
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=24.73 E-value=41 Score=29.30 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.2
Q ss_pred CCcEEEEEechhHHH--HHHHHHHHHhcCCceEEEEeeecC
Q 017695 238 GKDVTITAFSKIVGL--SLKAAEILAKEGISAEVINLRSIR 276 (367)
Q Consensus 238 g~di~Iia~G~~v~~--al~Aa~~L~~~Gi~v~vi~~~~i~ 276 (367)
++++++.-+|+.... +.+..+.|++.|.+|.||=-+.-+
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 567888888876644 778888898899999888554444
No 199
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=24.55 E-value=2.1e+02 Score=22.39 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=42.0
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhc---CCceEEEEeeecCCCCHHHHHHHHh-----cCCeEEEEeCCCCCCchHH
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKE---GISAEVINLRSIRPLDRSTINASVR-----KTNRLVTVEEGFPQHGVGA 307 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~---Gi~v~vi~~~~i~P~d~~~l~~~~~-----~~~~ivvvEe~~~~GGlg~ 307 (367)
..++|++. +.+..|.+|.+.|++. |+..+++++... + |.+.+.+.++ .+=..|++.. ...||+-.
T Consensus 14 ~~Vvvysk-~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~-~-d~~~~~~~l~~~~G~~tVP~IfI~G-~~IGG~dd 86 (127)
T 3l4n_A 14 SPIIIFSK-STCSYSKGMKELLENEYQFIPNYYIIELDKH-G-HGEELQEYIKLVTGRGTVPNLLVNG-VSRGGNEE 86 (127)
T ss_dssp CSEEEEEC-TTCHHHHHHHHHHHHHEEEESCCEEEEGGGS-T-THHHHHHHHHHHHSCCSSCEEEETT-EECCCHHH
T ss_pred CCEEEEEc-CCCccHHHHHHHHHHhcccCCCcEEEEecCC-C-CHHHHHHHHHHHcCCCCcceEEECC-EEEcCHHH
Confidence 45777776 6678889999999875 788899988753 1 3334444332 2224566665 44688654
No 200
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=24.36 E-value=2.4e+02 Score=23.65 Aligned_cols=63 Identities=8% Similarity=0.037 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhc--CCceEEEEeeec--CCCCH-------------------------HHHHHHHhcCCeEEEEeCCCC
Q 017695 251 GLSLKAAEILAKE--GISAEVINLRSI--RPLDR-------------------------STINASVRKTNRLVTVEEGFP 301 (367)
Q Consensus 251 ~~al~Aa~~L~~~--Gi~v~vi~~~~i--~P~d~-------------------------~~l~~~~~~~~~ivvvEe~~~ 301 (367)
..+..+++.|+++ |.+++++|+... .+++. +.+.+.+...+.||+.=.-+
T Consensus 20 ~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y- 98 (212)
T 3r6w_A 20 RLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMY- 98 (212)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEEEECB-
T ss_pred HHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEcCcc-
Confidence 4455667788877 999999999653 33432 23345566788766655433
Q ss_pred CCchHHHHHHHHH
Q 017695 302 QHGVGAEICASVI 314 (367)
Q Consensus 302 ~GGlg~~v~~~l~ 314 (367)
.+++...+...+-
T Consensus 99 ~~~~pa~lK~~iD 111 (212)
T 3r6w_A 99 NFSVPSGLKAWID 111 (212)
T ss_dssp TTBCCHHHHHHHH
T ss_pred cccCCHHHHHHHH
Confidence 4777777776663
No 201
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=24.18 E-value=58 Score=29.85 Aligned_cols=51 Identities=27% Similarity=0.486 Sum_probs=36.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||+.|.++... ++..|..+|..|++.+-++ +.+.+.+++.+-||+
T Consensus 159 ~Gk~vvVvGrs~iVG~p--~A~lL~~~gAtVtv~h~~t------~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRP--MATMLLNAGATVSVCHIKT------KDLSLYTRQADLIIV 209 (285)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCchHHHH--HHHHHHHCCCeEEEEeCCc------hhHHHHhhcCCEEEE
Confidence 58899999999887765 4456777888888887544 235567777775554
No 202
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=24.12 E-value=1.9e+02 Score=23.65 Aligned_cols=55 Identities=9% Similarity=0.155 Sum_probs=35.3
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHh--cCCeEEEEeC
Q 017695 240 DVTITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR--KTNRLVTVEE 298 (367)
Q Consensus 240 di~Iia~G~~v----~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~--~~~~ivvvEe 298 (367)
+++|+++|+.. .--..+++.|++.=-+++++|.-+ -|++.- ..+. +.+++|+||-
T Consensus 4 ~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt-~~~~l~---~~l~~~~~d~lIiVDA 64 (157)
T 3pu6_A 4 KKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYD-TPESEF---GKLRELAPDVIVVADA 64 (157)
T ss_dssp CEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEET-CGGGGH---HHHHHHCCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCC-CHHHHH---HHHHhcCCCEEEEEEe
Confidence 57899999865 234456777764312799999986 455432 2233 4788888774
No 203
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=24.03 E-value=80 Score=25.54 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=24.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEee
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
|++||.-|.. .++++..|.+.|.++.|++..
T Consensus 3 ~vvIIGgG~~---Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPS---GLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHH---HHHHHHHHHHCCCcEEEEeCC
Confidence 6888888863 456677788889999999965
No 204
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=23.46 E-value=47 Score=26.64 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=21.1
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVI 270 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi 270 (367)
.++.+++.+.+.....+..|+..|++.|++|.++
T Consensus 71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~~v~~l 104 (144)
T 3nhv_A 71 KEKVIITYCWGPACNGATKAAAKFAQLGFRVKEL 104 (144)
T ss_dssp TTSEEEEECSCTTCCHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEEECCCCccHHHHHHHHHHHCCCeEEEe
Confidence 3455555554432246677888999889864443
No 205
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=23.11 E-value=1.4e+02 Score=28.37 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=38.6
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCCC
Q 017695 240 DVTITAFSK-IVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFP 301 (367)
Q Consensus 240 di~Iia~G~-~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~~ 301 (367)
++. +.+|. ....|++.++.|+++|+.|.+......+ +. ....+..+.|+.+.+...
T Consensus 338 ~v~-v~~~~~~~~~a~~~a~~LR~~G~~v~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~ 394 (400)
T 3od1_A 338 QTC-ILFSNERRFEAIELARKKRANGEAVVLQDLAGVT----DV-DAMSSNYQDVIYCIGTAG 394 (400)
T ss_dssp CEE-EEECGGGHHHHHHHHHHHHTTTCCEEEEEGGGCS----CH-HHHHTTSSEEEEECSCC-
T ss_pred eEE-EEECcHHHHHHHHHHHHHHHCCCEEEEEecCChh----HH-HHHHcCCCEEEEEecCCC
Confidence 454 45775 4678899999999999999998776532 22 223446678888877653
No 206
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=23.02 E-value=1.2e+02 Score=24.96 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=37.3
Q ss_pred HHHHHHHHhcCCceEEEEeeecC--CCCHHHHHHHHhcCC--eEEEEeCCCCCCchHHHHHHHH
Q 017695 254 LKAAEILAKEGISAEVINLRSIR--PLDRSTINASVRKTN--RLVTVEEGFPQHGVGAEICASV 313 (367)
Q Consensus 254 l~Aa~~L~~~Gi~v~vi~~~~i~--P~d~~~l~~~~~~~~--~ivvvEe~~~~GGlg~~v~~~l 313 (367)
.++++.|++.|+.+-.|-+-.-. +.|.+.|.+.+..++ .++.+++....-.+-..|.+.+
T Consensus 130 ~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~l~~~~~~i~~~i 193 (198)
T 1n3y_A 130 KDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKI 193 (198)
T ss_dssp HHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHHHHHHHHHHHhhe
Confidence 45677788889988887775532 346788887777653 4677766433333444444443
No 207
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=22.96 E-value=1.6e+02 Score=21.76 Aligned_cols=43 Identities=19% Similarity=0.295 Sum_probs=33.7
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhc---CCceEEEEeeecCCCC
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKE---GISAEVINLRSIRPLD 279 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~---Gi~v~vi~~~~i~P~d 279 (367)
+|.++.|=|.|.-...|...++.|+++ |+++.-+++.|..--|
T Consensus 25 ~g~eV~ikA~G~AIskAV~vaeilk~r~~~~l~v~~i~i~s~~i~~ 70 (87)
T 1nh9_A 25 SNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDKVKN 70 (87)
T ss_dssp HCSEEEEEEEGGGHHHHHHHHHHHHHHTCTTCEEEEEEEEEEC---
T ss_pred CCCEEEEEEechHHHHHHHHHHHHHHhccCCeEEEEEEEeEEEEEc
Confidence 567899999999999999999999876 4677777777765333
No 208
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=22.29 E-value=69 Score=29.38 Aligned_cols=51 Identities=16% Similarity=0.292 Sum_probs=36.1
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||+.|.++... ++..|..+|..|++.+-++ +.+.+.+++.+-||+
T Consensus 160 ~Gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~hs~t------~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKP--VSQLLLNAKATVTTCHRFT------TDLKSHTTKADILIV 210 (285)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SSHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCchhHHH--HHHHHHHCCCeEEEEeCCc------hhHHHhcccCCEEEE
Confidence 57889999998877665 4556777888888876543 235567777775554
No 209
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.17 E-value=74 Score=27.32 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=33.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee--------------ecCCCCHHHHHHH-HhcCCeEEEE
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR--------------SIRPLDRSTINAS-VRKTNRLVTV 296 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~--------------~i~P~d~~~l~~~-~~~~~~ivvv 296 (367)
..+++|+++|.... ..++.|.++|. +.+++-. .-.+.|.+.+.+. +++.+.+++.
T Consensus 9 ~~~viI~G~G~~G~---~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWSESTL---ECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCCHHHH---HHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCChHHH---HHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 45688888885553 45566777787 8777632 1134556666554 5667766654
No 210
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.06 E-value=87 Score=25.61 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=24.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhc-CCceEEEEe
Q 017695 238 GKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINL 272 (367)
Q Consensus 238 g~di~Iia~G~~v~~al~Aa~~L~~~-Gi~v~vi~~ 272 (367)
+.+++|+++|.+-... ++.|.+. |.+|.++|.
T Consensus 39 ~~~v~IiG~G~~G~~~---a~~L~~~~g~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGA---YDELRARYGKISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHH---HHHHHHHHCSCEEEEES
T ss_pred CCcEEEECCCHHHHHH---HHHHHhccCCeEEEEEC
Confidence 5579999999877654 4567777 999999975
No 211
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=21.86 E-value=91 Score=24.82 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=24.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
.+..++|+++|.+-... ++.|.+.|.++.+++.
T Consensus 18 ~~~~v~IiG~G~iG~~l---a~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLI---ANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHHHHH---HHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHHHHHH---HHHHHhCCCeEEEEEC
Confidence 35678999998776653 4467778999999975
No 212
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.58 E-value=1.9e+02 Score=24.24 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=22.4
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
+++|+++|.+-.. .++.|.++|+++.++|.
T Consensus 2 ~iiIiG~G~~G~~---la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAYY---LARSMLSRKYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHHH---HHHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHHH---HHHHHHhCCCeEEEEEC
Confidence 4788888776553 45568788999999983
No 213
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=21.49 E-value=64 Score=29.59 Aligned_cols=51 Identities=24% Similarity=0.266 Sum_probs=36.5
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||..|..+... ++..|..+|..|++.+-+| +.+.+.+++.+-||+
T Consensus 160 ~Gk~vvVvGrs~iVG~p--lA~lL~~~gAtVtv~hs~T------~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRP--MALELLLGGCTVTVTHRFT------RDLADHVSRADLVVV 210 (286)
T ss_dssp TTCEEEEECTTSTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCchhHHH--HHHHHHHCCCeEEEEeCCC------cCHHHHhccCCEEEE
Confidence 58899999988877665 4456777888888886554 235567777875554
No 214
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=21.24 E-value=2.5e+02 Score=25.87 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=33.4
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeec-------------CCCCHHHHHHHHhcCCeEE
Q 017695 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI-------------RPLDRSTINASVRKTNRLV 294 (367)
Q Consensus 240 di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i-------------~P~d~~~l~~~~~~~~~iv 294 (367)
+++|++.|... ...++.|++.|+++-++|..-- ...|.+.+.+.+.+.+.|+
T Consensus 3 ~Ililg~g~~g---~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~d~v~ 67 (380)
T 3ax6_A 3 KIGIIGGGQLG---KMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSDVTT 67 (380)
T ss_dssp EEEEECCSHHH---HHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred EEEEECCCHHH---HHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHHhcCCEEE
Confidence 57888877543 3444557778999988887321 2236677777776666544
No 215
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=21.16 E-value=44 Score=27.28 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEEEeCCC
Q 017695 255 KAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGF 300 (367)
Q Consensus 255 ~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivvvEe~~ 300 (367)
.|.+.|++.||+.+ -+.-++++.+.+ ...+.||++++.+
T Consensus 54 ~a~~~l~e~Gid~~---~~~ar~l~~~~~----~~~DlIi~m~~~~ 92 (150)
T 2wmy_A 54 SAIRVAEKNGLCLK---GHRGTKFTSALA----RQYDLLLVMEYSH 92 (150)
T ss_dssp HHHHHHHHTTCCCT---TCCCCBCCHHHH----TTCSEEEESCHHH
T ss_pred HHHHHHHHcCCCcc---CCcccCCCHHHh----ccCCEEEEcCHHH
Confidence 35566788898764 245677877754 4678999998864
No 216
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=21.05 E-value=67 Score=29.51 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=36.3
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~~ivv 295 (367)
+|++++||.-|.++..- ++..|...|-.|++.+-++ +.|.+.+++.+-||+
T Consensus 158 ~gk~vvVIG~s~iVG~p--~A~lL~~~gAtVtv~hs~t------~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRP--MSMELLLAGCTTTVTHRFT------KNLRHHVENADLLIV 208 (288)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTTCEEEEECSSC------SCHHHHHHHCSEEEE
T ss_pred CCCEEEEECCChHHHHH--HHHHHHHCCCeEEEEeCCc------hhHHHHhccCCEEEE
Confidence 57889999999877654 5567777888888887555 335566777775443
No 217
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=20.83 E-value=1e+02 Score=22.64 Aligned_cols=31 Identities=19% Similarity=0.100 Sum_probs=26.0
Q ss_pred eeeCCcEEEEEechhHHHHHHHHHHHHhcCC
Q 017695 235 EREGKDVTITAFSKIVGLSLKAAEILAKEGI 265 (367)
Q Consensus 235 ~~~g~di~Iia~G~~v~~al~Aa~~L~~~Gi 265 (367)
++.|..++|.+.|.-...|+++...|-+++.
T Consensus 55 ~~~G~~i~i~a~G~De~~A~~~l~~l~~~~f 85 (88)
T 3le1_A 55 VSQGNVVKLSAEGDDEEEAIKALVDLIESKF 85 (88)
T ss_dssp CCTTCEEEEEEESTTHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHhcc
Confidence 4678899999999999999999888766653
No 218
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.50 E-value=1.5e+02 Score=25.93 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=26.0
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
+|..++||+.|.+.. ..++.|.+.|.++.||+..
T Consensus 30 ~gk~VLVVGgG~va~---~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIAT---RRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHH---HHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHH---HHHHHHHHCCCEEEEECCC
Confidence 578899999886544 4556787889999999754
No 219
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=20.39 E-value=69 Score=29.19 Aligned_cols=32 Identities=28% Similarity=0.192 Sum_probs=24.2
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEee
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~ 273 (367)
-|++||+-|..-- .+|..|.++|++|.|++-.
T Consensus 5 yDViIVGaGpaGl---~~A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 5 YDVLVVGGGPGGS---TAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEECCSHHHH---HHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHH---HHHHHHHHCCCcEEEEeCC
Confidence 3899999886432 3566788899999999853
No 220
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=20.31 E-value=93 Score=27.63 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=23.5
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCceEEEEe
Q 017695 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (367)
Q Consensus 239 ~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~ 272 (367)
-|++||..|.-- +.||..|++.|.+|.||+-
T Consensus 7 yDvvIIG~GpAG---l~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 7 FDIAIIGAGPAG---MTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEEECCSHHH---HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHH---HHHHHHHHHCCCCEEEEec
Confidence 379999998532 3456667778999999984
No 221
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=20.17 E-value=1.8e+02 Score=28.28 Aligned_cols=56 Identities=20% Similarity=0.152 Sum_probs=37.3
Q ss_pred CcEEEEEechh-HHHHHHHHHHHHhcCCceEEEEeeecCCCCHHHHHHHHhcCC--eEEEEeC
Q 017695 239 KDVTITAFSKI-VGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN--RLVTVEE 298 (367)
Q Consensus 239 ~di~Iia~G~~-v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~d~~~l~~~~~~~~--~ivvvEe 298 (367)
.|+.|+++|.. ...|++.++.|+++|++|.+.. . +-..+.-.+.+.+.+ .+|++.+
T Consensus 362 ~~v~v~~~~~~~~~~a~~la~~LR~~Gi~ve~~~-~---~~slkkq~k~A~k~ga~~vviiGe 420 (456)
T 3lc0_A 362 VDDVVIPFDESMRPHALAVLRRLRDAGRSADIIL-D---KKKVVQAFNYADRVGAVRAVLVAP 420 (456)
T ss_dssp EEEEEEESSGGGHHHHHHHHHHHHHTTCCEEECC-S---CCCHHHHHHHHHHTTEEEEEEECH
T ss_pred CcEEEEEcCHHHHHHHHHHHHHHHHCCCeEEEec-C---CCCHHHHHHHHHHcCCCEEEEECC
Confidence 47889999964 4789999999999999997742 1 112233334555443 5666654
No 222
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=20.15 E-value=2.2e+02 Score=26.07 Aligned_cols=55 Identities=20% Similarity=0.177 Sum_probs=37.2
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCceEEEEeeecCCC---C----HHHHHHHHhcCCeEEE
Q 017695 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL---D----RSTINASVRKTNRLVT 295 (367)
Q Consensus 237 ~g~di~Iia~G~~v~~al~Aa~~L~~~Gi~v~vi~~~~i~P~---d----~~~l~~~~~~~~~ivv 295 (367)
.|+.+.||++|.+-... ++.|+..|.+|.++|.. .++. + .+.+.+++++.+.|++
T Consensus 138 ~g~tvGIiG~G~IG~~v---A~~l~~~G~~V~~~dr~-~~~~~~~~~~~~~~~l~ell~~aDiV~l 199 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKV---AESLQAWGFPLRCWSRS-RKSWPGVESYVGREELRAFLNQTRVLIN 199 (315)
T ss_dssp TTCCEEEECCSHHHHHH---HHHHHTTTCCEEEEESS-CCCCTTCEEEESHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEEcCC-chhhhhhhhhcccCCHHHHHhhCCEEEE
Confidence 47789999999987753 45677779999888743 2222 1 1457777777775443
Done!