Query 017703
Match_columns 367
No_of_seqs 127 out of 141
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 03:36:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ay5_A Cyclin-D1-binding prote 100.0 2.3E-56 7.7E-61 441.7 31.5 300 36-349 46-351 (360)
2 4abx_A DNA repair protein RECN 76.4 36 0.0012 29.2 13.4 71 270-346 94-164 (175)
3 3gwk_C SAG1039, putative uncha 75.6 16 0.00053 27.8 8.5 27 324-350 47-73 (98)
4 2vs0_A Virulence factor ESXA; 70.7 25 0.00084 26.3 8.5 27 324-350 45-71 (97)
5 3l39_A Putative PHOU-like phos 69.6 61 0.0021 28.8 14.3 31 157-189 22-52 (227)
6 4ioe_A Secreted protein ESXB; 66.0 18 0.00061 27.0 6.7 52 298-349 10-73 (93)
7 3zbh_A ESXA; unknown function, 63.7 23 0.00079 26.5 7.1 27 324-350 48-74 (99)
8 3ubc_A Hemoglobin-like flavopr 63.6 32 0.0011 27.4 8.3 115 224-358 1-116 (131)
9 1it2_A Hemoglobin; hagfish, de 60.4 69 0.0024 26.2 10.0 108 223-342 10-126 (146)
10 3dyj_A Talin-1; helix bundles, 60.1 45 0.0015 32.0 9.6 111 14-127 184-296 (332)
11 3l39_A Putative PHOU-like phos 59.8 82 0.0028 27.9 11.0 60 286-345 80-144 (227)
12 3fav_B ESAT-6, 6 kDa early sec 58.6 52 0.0018 24.5 8.2 50 301-350 16-70 (94)
13 3pt8_A Hemoglobin II; oxygen c 57.8 76 0.0026 25.9 13.1 108 223-343 3-121 (152)
14 1wrd_A TOM1, target of MYB pro 56.4 71 0.0024 25.1 10.3 88 224-322 3-91 (103)
15 3g46_A Globin-1; oxygen transp 52.3 94 0.0032 25.3 12.6 109 223-344 9-125 (146)
16 1yhu_C Hemoglobin B1A chain; g 51.6 94 0.0032 25.3 9.4 108 223-343 3-123 (148)
17 2vhb_A Hemoglobin; heme, respi 50.4 77 0.0026 25.6 8.6 19 223-241 1-19 (146)
18 2dc3_A Cytoglobin; myoglobin, 49.6 1.3E+02 0.0043 25.9 13.0 120 223-358 21-152 (193)
19 2c0k_A Hemoglobin; oxygen tran 48.0 1.1E+02 0.0038 24.9 12.2 109 224-342 1-119 (151)
20 3dwc_A TCMCP-1, metallocarboxy 47.1 80 0.0027 32.0 9.5 145 151-322 28-191 (505)
21 3pt8_B Hemoglobin III; oxygen 46.8 1.2E+02 0.004 24.7 11.6 108 223-343 3-121 (152)
22 2jx0_A ARF GTPase-activating p 46.6 1.3E+02 0.0043 25.1 11.7 74 272-346 42-127 (135)
23 1mba_A Myoglobin; oxygen stora 44.0 1.2E+02 0.0043 24.3 10.8 109 223-344 2-120 (147)
24 1x9f_A Globin IV, extracellula 44.0 1.2E+02 0.0039 24.9 8.8 108 223-343 6-125 (151)
25 4hrt_B Hemoglobin B chain; oxy 43.7 1.2E+02 0.0042 24.7 8.9 120 223-359 12-140 (152)
26 4i0x_A ESAT-6-like protein MAB 42.4 59 0.002 24.6 6.2 43 308-350 18-65 (94)
27 3hoa_A Thermostable carboxypep 42.0 2.7E+02 0.0091 28.2 12.5 149 150-323 28-202 (509)
28 3hq2_A Bacillus subtilis M32 c 41.9 81 0.0028 32.0 8.6 147 150-323 28-191 (501)
29 2wy4_A Single domain haemoglob 41.6 1.3E+02 0.0045 23.8 11.3 106 224-343 1-107 (140)
30 2lhb_A Hemoglobin V (cyano Met 40.7 1.5E+02 0.005 24.1 12.0 109 223-343 10-129 (149)
31 3h6p_C ESAT-6-like protein ESX 39.9 41 0.0014 25.4 4.9 52 299-350 15-71 (96)
32 1hlb_A Hemoglobin (deoxy); oxy 35.8 1.8E+02 0.0061 23.7 9.6 120 223-359 12-141 (158)
33 4hrt_A Globin-2 A chain; oxyge 35.0 1.8E+02 0.0063 23.6 11.1 121 223-359 10-138 (150)
34 1gdj_A Leghemoglobin (deoxy); 34.1 1.8E+02 0.0062 23.3 9.5 18 223-240 2-19 (153)
35 4etr_A Putative uncharacterize 33.9 1.1E+02 0.0038 25.3 7.1 36 276-314 54-89 (153)
36 3fav_A ESAT-6-like protein ESX 33.6 1E+02 0.0035 23.2 6.4 49 302-350 19-72 (101)
37 1cqx_A Flavohemoprotein; globi 33.4 2.3E+02 0.0079 26.7 10.2 105 224-342 2-107 (403)
38 4g1v_A Flavohemoglobin; three 32.9 1.4E+02 0.0046 28.4 8.5 20 223-242 1-20 (399)
39 1oxz_A ADP-ribosylation factor 32.5 2.5E+02 0.0086 24.5 11.9 69 252-323 87-157 (186)
40 3t6g_B Breast cancer anti-estr 32.1 2.9E+02 0.0097 25.0 12.4 123 223-347 92-227 (229)
41 2c5k_T Syntaxin TLG1, T-snare 32.0 1.8E+02 0.006 22.5 9.4 53 299-351 38-94 (95)
42 4i0x_B ESAT-6-like protein MAB 31.8 1.1E+02 0.0039 23.3 6.3 25 326-350 54-78 (103)
43 1sct_B Hemoglobin II (carbonmo 31.5 2.1E+02 0.0071 23.1 9.3 117 225-359 13-139 (151)
44 1kdx_A CBP; complex (transcrip 30.7 1.2E+02 0.0041 23.0 6.0 59 286-344 19-79 (81)
45 3r84_A Mediator of RNA polymer 30.2 1.4E+02 0.0048 22.9 6.3 24 270-293 5-28 (86)
46 1q1f_A Neuroglobin; globin fol 29.7 2E+02 0.0069 22.9 7.9 118 224-358 1-131 (151)
47 1yhu_D Hemoglobin B2 chain; gl 29.1 2.3E+02 0.0078 22.9 9.7 107 223-343 3-122 (149)
48 1yhu_B Giant hemoglobins B cha 28.6 2.2E+02 0.0076 22.6 10.5 107 223-343 3-119 (144)
49 2gyq_A YCFI, putative structur 28.4 1.4E+02 0.0048 25.6 6.9 75 267-341 16-91 (173)
50 1sct_A Hemoglobin II (carbonmo 28.1 2.4E+02 0.0081 22.8 11.0 119 225-359 12-138 (150)
51 3gm3_A Protein tyrosine kinase 27.8 2E+02 0.0067 24.4 7.4 55 267-322 49-103 (153)
52 2r80_A Hemoglobin subunit alph 27.2 2.4E+02 0.0083 22.6 10.2 115 224-358 2-123 (141)
53 2zs0_C Extracellular giant hem 27.1 2.5E+02 0.0084 22.6 9.2 106 223-342 3-121 (147)
54 1o3x_A ADP-ribosylation factor 27.0 2.7E+02 0.0092 23.0 12.7 70 251-323 61-132 (140)
55 1jeb_A Hemoglobin zeta chain; 27.0 2.4E+02 0.0082 22.5 10.5 117 224-359 3-125 (142)
56 1naf_A ADP-ribosylation factor 26.8 2.9E+02 0.01 23.4 11.8 69 252-323 71-141 (158)
57 1jf3_A Monomer hemoglobin comp 26.2 2.5E+02 0.0085 22.4 11.6 118 224-358 2-128 (147)
58 1spg_A Hemoglobin; carbon mono 25.9 2.6E+02 0.0089 22.5 11.5 118 224-360 3-128 (144)
59 2gs4_A Protein YCIF; stress pr 25.6 1.7E+02 0.0056 25.0 6.8 65 267-331 9-74 (166)
60 1x9f_B Erythrocruorin, globin 23.8 2.8E+02 0.0096 22.2 10.4 107 223-343 3-119 (145)
61 1wmu_A Hemoglobin D alpha chai 23.6 2.8E+02 0.0096 22.1 11.1 117 224-359 2-124 (141)
62 1x3k_A Hemoglobin component V; 23.6 2.1E+02 0.0073 23.2 7.0 82 223-310 4-95 (152)
63 1cg5_A Protein (hemoglobin); o 23.1 2.9E+02 0.0099 22.1 11.8 117 224-359 2-124 (141)
64 1out_A Hemoglobin I; heme, oxy 22.4 3E+02 0.01 22.1 11.8 117 224-359 3-126 (143)
65 2huj_A LIN2004 protein; hypoth 21.9 3.5E+02 0.012 22.5 10.9 78 230-322 58-135 (140)
66 4f7g_B Talin-1; alpha-helix bu 21.6 3.6E+02 0.012 24.1 8.4 78 41-127 67-151 (216)
67 2bk9_A CG9734-PA; oxygen trans 21.5 3.2E+02 0.011 22.0 14.3 104 224-342 1-118 (153)
68 4b4y_A Neuroglobin; transport 21.2 3.3E+02 0.011 22.0 11.3 18 223-240 8-25 (154)
69 3d1k_A Hemoglobin subunit alph 21.0 3.2E+02 0.011 21.8 12.7 117 224-359 2-125 (142)
70 2hfi_A Hypothetical protein YP 20.8 3.5E+02 0.012 22.2 9.7 79 230-323 42-120 (131)
71 3mkb_A Hemoglobin subunit alph 20.4 3.4E+02 0.012 21.9 10.2 19 223-241 1-19 (140)
72 1xq5_A Hemoglobin alpha-1 chai 20.1 3.4E+02 0.012 21.7 11.2 118 224-359 3-126 (143)
No 1
>3ay5_A Cyclin-D1-binding protein 1; dominant-negative helix-loop-helix transcriptional regulator cycle; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.3e-56 Score=441.72 Aligned_cols=300 Identities=16% Similarity=0.225 Sum_probs=235.4
Q ss_pred CcCc-chHHHHHHHHHHHHhhhhhhhhcccCCC-CCHHHHHHHHHHHHHHHHHHHHhccCCCCCCChhHHHHHHHHHHHH
Q 017703 36 SLEK-VSWNDVIQMGEQVSKKATVVGMLWTGET-PEAKAIEENMAEYFNMLQGFILLSHGSTVGAGPTLSLSIHASVKQV 113 (367)
Q Consensus 36 ~~~~-~~~~~l~~~a~~l~~~aTKlsll~~~~P-ps~~~~~~~~~~l~~~l~~~~~l~~~~~~g~g~tl~~~i~~~~~~v 113 (367)
.++. +||.+|.+++++||+||||+||+|++.| |++.+++++++++++++++++++||+.+.++|++|+++|++.++++
T Consensus 46 ~f~~~~~~~~l~~~a~~l~~~aTKlsLl~~~~p~Ps~~~~~~~~~~~~~~l~~l~s~~~~~~~~~g~tl~~~i~~~v~~v 125 (360)
T 3ay5_A 46 EFNREMFWRRLNEAAVTVSREATTLTIVFSQLPLPSPQETQKFCEQVHAAIKAFIAVYYLLPKDQGITLRKLVRGATLDI 125 (360)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHHHHHHHHhhhHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHH
Confidence 3555 8999999999999999999999997444 7777889999999999999999999998899999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcccccCcccchhhhHHHhhhhhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc
Q 017703 114 VDSSFKLMMESITLYAGSDNKDKEHLMPQYVGAVWEACSALKKTPATNITAIGRAMTQVAVSMKDVLREMKELKPSSSDQ 193 (367)
Q Consensus 114 v~~~~~L~~~l~~~~~~s~~~~~~~~~l~stG~VWeaCD~l~~lp~~N~~av~~~~~~~~~lvkDaleEleE~~e~~~~~ 193 (367)
|+++.+|+++++..+.++. ...++++||+||+|||++.++|++|++|++++|+++.++||||++||+||.++.+++
T Consensus 126 l~~~~~L~~~i~~~~~~~~----~~~~L~stG~VWeaCd~l~~lp~~N~~av~~~~~~~~~lvkDaleEl~E~~e~~D~~ 201 (360)
T 3ay5_A 126 VDGMAQLMEVLSVTPTQSP----ENNDLISYNSVWVACQQMPQIPRDNKAAALLMLTKNVDFVKDAHEEMEQAVEESDPY 201 (360)
T ss_dssp HHHHHHHHHHHHC------------------CHHHHHHHTTTTSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHhcccccc----chhHHHHhhHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999998754432 256888999999999999999999999999999999999999999999999764433
Q ss_pred cccccCCCccccccCcccCCCC----CcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchh
Q 017703 194 NNEASHDDSAKADSEHQEDDNS----SLDELGNDLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFV 269 (367)
Q Consensus 194 ~~e~s~d~~~~~d~~~d~de~~----ddd~~~~~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v 269 (367)
.+..+ + .++++++++++++ ..++++++||++|++++++|++++++++.++| +|+.+++..++ ++++
T Consensus 202 ~~~~~-d--~ee~~d~~~~d~Dd~~g~~~~~~~~~s~ee~~l~~~~~~l~~a~~~~lk----~i~~~ik~~~~---~~~v 271 (360)
T 3ay5_A 202 SGLLN-D--TEENNSDNHNHEDDVLGFPSNQDLYWSEDDQELIIPCLALVRASKACLK----KIRMLVAENGK---KDQV 271 (360)
T ss_dssp ------------------------------CTTSCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHCC---TTCH
T ss_pred ccccc-c--ccccccccCcccccccccccccccccCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHccCc---hhHH
Confidence 11100 0 0001100111111 12335779999999999999999999988888 56666654433 3678
Q ss_pred hHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhc
Q 017703 270 DTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVD 349 (367)
Q Consensus 270 ~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (367)
++||+|++++++|+++|||||++||||+|+++++.++.+|.+++++|+.+++++|++|+..-.|++.|++++++==..|.
T Consensus 272 ~~LD~L~~~~~~i~~~VDeLa~slYPp~d~~~v~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~Wi~~l~~A~~h~~~~~~ 351 (360)
T 3ay5_A 272 AQLDDIVDISDEISPSVDDLALSIYPPMSHLTVRINSAKLVSVLKKALEITKASHVTPQPEDSWIPLLINAIDHCMNRIK 351 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCC----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999886444443
No 2
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=76.45 E-value=36 Score=29.15 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=40.8
Q ss_pred hHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHh
Q 017703 270 DTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDS 346 (367)
Q Consensus 270 ~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (367)
..|++..-...++...+......+ +.||.. +..+..-+..+...-++.+.+++++..+..+++.-+..|+.
T Consensus 94 e~l~~a~~~l~d~~~~L~~y~~~l--e~DP~r----L~~ie~RL~~l~~L~RKyg~~~eell~~~~~~~~eL~~l~~ 164 (175)
T 4abx_A 94 NELRAALESVQAIAGELRDVAEGS--AADPEA----LDRVEARLSALSKLKNKYGPTLEDVVEFGAQAAEELAGLEE 164 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC--CCCHHH----HHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC--CCCHHH----HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhC
Confidence 333334444444444444434444 334442 22333344444444556778999999999999999988864
No 3
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=75.60 E-value=16 Score=27.76 Aligned_cols=27 Identities=15% Similarity=0.250 Sum_probs=24.1
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 324 NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
+...+.|...++.|+..+.+|...|..
T Consensus 47 G~a~~aF~~~~~~~~~~~~~~~~~L~~ 73 (98)
T 3gwk_C 47 GSTFDSFEAQFNELSPKITEFAQLLED 73 (98)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999884
No 4
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=70.68 E-value=25 Score=26.27 Aligned_cols=27 Identities=7% Similarity=0.153 Sum_probs=23.9
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 324 NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
+...+.|......|+.++.+|...|..
T Consensus 45 G~a~~af~~~~~~~~~~~~~~~~~L~~ 71 (97)
T 2vs0_A 45 GQAFSRFEEQFQQLSPKVEKFAQLLEE 71 (97)
T ss_dssp SSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999998874
No 5
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=69.56 E-value=61 Score=28.81 Aligned_cols=31 Identities=13% Similarity=0.004 Sum_probs=23.7
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 017703 157 TPATNITAIGRAMTQVAVSMKDVLREMKELKPS 189 (367)
Q Consensus 157 lp~~N~~av~~~~~~~~~lvkDaleEleE~~e~ 189 (367)
+|++.. +...+.+....+..+.+-+.++.+.
T Consensus 22 ~pke~~--ff~ll~~~a~~v~~~a~~L~~~l~~ 52 (227)
T 3l39_A 22 TPKEPK--FFPLLKQLSDVLSASSVLLVESMEH 52 (227)
T ss_dssp CCCCCC--HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCch--HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 577655 6667777888888888888888763
No 6
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=66.02 E-value=18 Score=27.04 Aligned_cols=52 Identities=10% Similarity=0.112 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH-------Hhh-----cCCcHHHHHHHHHHHHHHHHHHhhhc
Q 017703 298 ELSVIKAGSVKILSMTDELQKEV-------ESF-----NSSSEAFIQACNGLRSSLKQMDSEVD 349 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (367)
+|++++.....+......+-.++ ..+ +...+.|...++.|+.++.++...|.
T Consensus 10 ~~e~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~~W~G~a~~af~~~~~~~~~~~~~~~~~L~ 73 (93)
T 4ioe_A 10 TPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILE 73 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555544444433333 333 23667899988888888888888877
No 7
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=63.71 E-value=23 Score=26.53 Aligned_cols=27 Identities=41% Similarity=0.519 Sum_probs=22.9
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 324 NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
+...+.|......|+..+.+|...|..
T Consensus 48 G~a~~af~~~~~~~~~~~~~~~~~L~~ 74 (99)
T 3zbh_A 48 GASSEAFIQQYQELRPSFEKMAVLLNE 74 (99)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346779999999999999999998874
No 8
>3ubc_A Hemoglobin-like flavoprotein; oxygen-bound, autoxidation, nanotemplate, langmuir-blodgett, films, oxygen transport; HET: HEM; 1.65A {Methylacidiphilum infernorum V4} PDB: 3ubv_A* 3s1i_A* 3s1j_A*
Probab=63.62 E-value=32 Score=27.41 Aligned_cols=115 Identities=10% Similarity=0.040 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHH
Q 017703 224 LSSEEMKVAQLAIGIVSDML-VVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVI 302 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~-~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v 302 (367)
||++++.+++...+.++.-. .+-. +...++|. ..|.....+.. ++-.+...+...++..+..+- +++.+
T Consensus 1 lt~~~~~~i~~sw~~v~~~~~~~g~---~fy~rlf~-~~P~~k~~F~~---d~~~h~~~l~~al~~~v~~ld---~~~~l 70 (131)
T 3ubc_A 1 IDQKEKELIKESWKRIEPNKNEIGL---LFYANLFK-EEPTVSVLFQN---PISSQSRKLMQVLGILVQGID---NLEGL 70 (131)
T ss_dssp CCHHHHHHHHHHHHHHGGGHHHHHH---HHHHHHHH-HCGGGGGGCCS---CHHHHHHHHHHHHHHHHHTGG---GGGGG
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHH-hChHHHHHccc---cHHHHHHHHHHHHHHHHHhCC---ChHHH
Confidence 58899999999988874322 2211 23334444 33322212221 355677777778888877764 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 017703 303 KAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEA 358 (367)
Q Consensus 303 ~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (367)
...+..|... =.+++..|+.|.....-+..+|+. .++..-|.++..
T Consensus 71 ~~~l~~L~~~-------H~~~gV~p~~f~~~~~~Ll~~l~~---~lg~~~t~e~~~ 116 (131)
T 3ubc_A 71 IPTLQDLGRR-------HKQYGVVDSHYPLVGDCLLKSIQE---YLGQGFTEEAKA 116 (131)
T ss_dssp HHHHHHHHHH-------HHHTTCCTTHHHHHHHHHHHHHHH---HHGGGSCHHHHH
T ss_pred HHHHHHHHHH-------HHHcCCCHHHHHHHHHHHHHHHHH---HhCccCCHHHHH
Confidence 4433333221 124678888888887777666554 455545555544
No 9
>1it2_A Hemoglobin; hagfish, deoxy form, oxygen storage/transport complex; HET: HEM; 1.60A {Eptatretus burgeri} SCOP: a.1.1.2 PDB: 1it3_A*
Probab=60.44 E-value=69 Score=26.19 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=63.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---------CCchhhHHHHHHHHHhhhhhhhHHhHhcc
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDD---------GGKFVDTLERLLKLCQGIGVQIDELGASL 293 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~---------~~~~v~~LD~L~~~~~~i~~~VDeL~ssl 293 (367)
.||++|+..++...+.++.-..-+ ......++|+ ..|.. ..+.+..=.++-.+...+...+++.+..|
T Consensus 10 ~Lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~f~~~~~~l~~n~~~~~h~~~v~~al~~~v~~l 86 (146)
T 1it2_A 10 TLTDGDKKAINKIWPKIYKEYEQY--SLNILLRFLK-CFPQAQASFPKFSTKKSNLEQDPEVKHQAVVIFNKVNEIINSM 86 (146)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHH-HCGGGGGGCTTTTTCCSCGGGCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHH-HCHHHHHHccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhC
Confidence 499999999999998884221111 1112233443 22211 11112233467788888888999998877
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 017703 294 YPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLK 342 (367)
Q Consensus 294 Ypp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~ 342 (367)
- |++.+...+.+|... ...+++..|+.|.....-+-.+|+
T Consensus 87 d---d~~~l~~~l~~L~~~------H~~~~~V~p~~f~~~~~~Ll~~l~ 126 (146)
T 1it2_A 87 D---NQEEIIKSLKDLSQK------HKTVFKVDSIWFKELSSIFVSTID 126 (146)
T ss_dssp T---CHHHHHHHHHHHHHH------HHHTSCCCTTHHHHHHHHHHHHTT
T ss_pred C---CHHHHHHHHHHHHHH------HhhhcCCCHHHHHHHHHHHHHHHH
Confidence 5 556566555555432 122367888888877666655543
No 10
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=60.07 E-value=45 Score=32.02 Aligned_cols=111 Identities=9% Similarity=0.107 Sum_probs=72.6
Q ss_pred HHhhhhhchHHHHHhhhccccCCcCcchHHHHHHHHHHHHhhhhhhhhcccCCCCCHHHHHHHHHHHHHHHHHHHHhccC
Q 017703 14 TLNNHLNNIHETLQVLNQTAASSLEKVSWNDVIQMGEQVSKKATVVGMLWTGETPEAKAIEENMAEYFNMLQGFILLSHG 93 (367)
Q Consensus 14 ~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~a~~l~~~aTKlsll~~~~Pps~~~~~~~~~~l~~~l~~~~~l~~~ 93 (367)
-|+.-..-|...++.++++.+++. ...=.+|..+++-|-..++|+--... .-+++++.......-..+..++..|++
T Consensus 184 aLEaai~~I~~el~~~~s~~~p~~-~~tpE~li~~ak~vt~atakaVaA~n--s~~qeDii~aan~~r~aV~dll~~~k~ 260 (332)
T 3dyj_A 184 ALEATTEHIRQELAVFCSPEPPAK-TSTPEDFIRMTKGITMATAKAVAAGN--SCRQEDVIATANLSRRAIADMLRACKE 260 (332)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCSS-CCCHHHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCcC-CCCHHHHHHHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 344444545666777777666644 44557888888888888888877762 224477777666666666666665543
Q ss_pred CCCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017703 94 STVG--AGPTLSLSIHASVKQVVDSSFKLMMESITL 127 (367)
Q Consensus 94 ~~~g--~g~tl~~~i~~~~~~vv~~~~~L~~~l~~~ 127 (367)
..+. -.+..+..+-...+.+-.++..|++.+...
T Consensus 261 aa~~~~~~~e~r~~~~~~~k~~a~~~~~LL~~v~~~ 296 (332)
T 3dyj_A 261 AAFHPEVAPDVRLRALHYGRECANGYLELLDHVLLT 296 (332)
T ss_dssp HHTSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3211 256777777777788878888888777644
No 11
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=59.75 E-value=82 Score=27.95 Aligned_cols=60 Identities=13% Similarity=0.145 Sum_probs=28.7
Q ss_pred hHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHHHH
Q 017703 286 IDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESF-----NSSSEAFIQACNGLRSSLKQMD 345 (367)
Q Consensus 286 VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~ 345 (367)
...|..+++.|.+-+++..-+..+..+++.+-.+...+ ...++.+...+....++..++.
T Consensus 80 ~~~L~~~fitP~dReDI~~L~~~lDdI~D~ie~~a~~l~l~~~~~~~~~~~~l~~~i~~~~~~l~ 144 (227)
T 3l39_A 80 FDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRLIHEEAINIG 144 (227)
T ss_dssp HHHHHHCSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34455555566665555555555555554443333322 2234455554444444444443
No 12
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=58.59 E-value=52 Score=24.49 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 301 VIKAGSVKILSMTDELQKEVESF-----NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 301 ~v~~~~~~L~~~l~k~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
.+......|...+..|-..+..+ +...+.|..+...|..+...|...|..
T Consensus 16 ~~~~~~~~i~~~l~~l~~~v~~l~~~W~G~A~~af~~~~~~w~~~~~~~~~~L~~ 70 (94)
T 3fav_B 16 AIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQN 70 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGGTCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555556666666666555 468889999999999999999998873
No 13
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=57.85 E-value=76 Score=25.88 Aligned_cols=108 Identities=10% Similarity=-0.009 Sum_probs=65.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhh-----------HHHHHHHHHhhhhhhhHHhHh
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFVD-----------TLERLLKLCQGIGVQIDELGA 291 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v~-----------~LD~L~~~~~~i~~~VDeL~s 291 (367)
.||++++.+++...+.++.-..-+ ......++|. ..|....-+.. .=.++..+...+...++.++.
T Consensus 3 ~Lt~~~~~~i~~sw~~v~~~~~~~--g~~~y~rlF~-~~P~~k~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~ 79 (152)
T 3pt8_A 3 TLTNPQKAAIRSSWSKFMDNGVSN--GQGFYMDLFK-AHPETLTPFKSLFGGLTLAQLQDNPKMKAQSLVFCNGMSSFVD 79 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHH-HCGGGGGGGHHHHTTSCHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHHH-hCchHHHHhHHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 589999999999998874322211 1122234444 33322111211 112577888899999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 292 SLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 292 slYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
.+- |++.+...+.+|.. .=.+++..|+.|.....-+..+|+.
T Consensus 80 ~ld---~~~~l~~~l~~L~~-------~H~~~gV~p~~f~~~~~~ll~~l~~ 121 (152)
T 3pt8_A 80 HLD---DNDMLVVLIQKMAK-------LHNNRGIRASDLRTAYDILIHYMED 121 (152)
T ss_dssp TTT---CHHHHHHHHHHHHH-------HHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCC---CHHHHHHHHHHHHH-------HHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 875 55555555554432 2224577888888888888777777
No 14
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=56.38 E-value=71 Score=25.11 Aligned_cols=88 Identities=16% Similarity=0.203 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-CCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHH
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDD-GGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVI 302 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~-~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v 302 (367)
+++|....+..-+..++....++. .+|....|.. .....+.+..|+..|+...+.|=.|+... +.+++
T Consensus 3 ~~~eq~~k~~~el~~v~~n~~lL~-------EML~~~~p~~~~~~~~el~~eL~~~c~~~qp~i~~li~~~----~dee~ 71 (103)
T 1wrd_A 3 LGSEQIGKLRSELEMVSGNVRVMS-------EMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQI----ANEQL 71 (103)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHH-------HHHHHSCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-------HHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHhcc----CCHHH
Confidence 466777666666666666555554 3443333322 22456899999999999999999999963 44445
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017703 303 KAGSVKILSMTDELQKEVES 322 (367)
Q Consensus 303 ~~~~~~L~~~l~k~~~~i~~ 322 (367)
...+-.++..+..++..-+.
T Consensus 72 l~~lL~~ND~L~~vl~ry~~ 91 (103)
T 1wrd_A 72 TEELLIVNDNLNNVFLRHER 91 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHH
Confidence 55555677776666555443
No 15
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} SCOP: a.1.1.2 PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 3uhg_A* 3uhs_A* 3uhk_A* 3uhi_A* 3uhn_A* 3ugy_A* 2auo_A* 2aup_A* 3uhr_A* 3uh5_A* 3uh3_A* ...
Probab=52.34 E-value=94 Score=25.29 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=63.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchh--------hHHHHHHHHHhhhhhhhHHhHhccC
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFV--------DTLERLLKLCQGIGVQIDELGASLY 294 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v--------~~LD~L~~~~~~i~~~VDeL~sslY 294 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|.....+. +.=.++..+...+...++.++..|-
T Consensus 9 ~Lt~~~~~~I~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~~~~~~~~n~~~~~h~~~v~~al~~~v~~ld 85 (146)
T 3g46_A 9 QLTADVKKDLRDSWKVIGSDKKGN--GVALMTTLFA-DNQETIGYFKRLGDVSQGMANDKLRGHSITLMYALQNFIDQLD 85 (146)
T ss_dssp TCCHHHHHHHHHHHHHHGGGHHHH--HHHHHHHHHH-HCGGGGGGGGGGCCGGGGGGCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHH-HCHHHHHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHHHHHcC
Confidence 689999999999998884322211 1122234444 2221110110 0224567788888888999888874
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHH
Q 017703 295 PPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQM 344 (367)
Q Consensus 295 pp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (367)
|++.+...+.+|.. .=.+++..|+.|.....-+...|+..
T Consensus 86 ---d~~~l~~~l~~l~~-------~H~~~~V~p~~f~~~~~~ll~~l~~~ 125 (146)
T 3g46_A 86 ---NPDDLVCVVEKFAV-------NHITRKISAAEFGKINGPIKKVLASK 125 (146)
T ss_dssp ---CHHHHHHHHHHHHH-------HHHHTTCCHHHHGGGHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHHHH-------HHhcCCCCHHHHHHHHHHHHHHHHHc
Confidence 55545554444432 12255777777777777777776665
No 16
>1yhu_C Hemoglobin B1A chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=51.64 E-value=94 Score=25.32 Aligned_cols=108 Identities=13% Similarity=0.057 Sum_probs=60.9
Q ss_pred CCCHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHhhhhccCCCCCCchh------hHHHHHHHHHhhhhhhhHHh
Q 017703 223 DLSSEEMKVAQLAIGIVSDM-------LVVIKELIRTITGLLKHENPDDGGKFV------DTLERLLKLCQGIGVQIDEL 289 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~-------~~~lK~lir~i~~~lk~~~~~~~~~~v------~~LD~L~~~~~~i~~~VDeL 289 (367)
.+|++|+..++...+.++.- ..+-. ....++|. ..|.....+. ..=.++..+...+...++.+
T Consensus 3 ~ls~~~~~~v~~sw~~v~~~~~~~~~~~~~g~---~~y~rlF~-~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~al~~~ 78 (148)
T 1yhu_C 3 NCADAAAAIVQAQWEDVWSAAAAAASRVSAGE---EVFAALFK-MVPAAKNLFTRVNVADINSPEFQGHVVRVMGGLDIL 78 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSSCHHHHHHHHH---HHHHHHHH-HCGGGGGGSGGGTGGGTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcccccchHHHHHH---HHHHHHHH-HChhHHHhccccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 47999999999999887322 11111 12234444 2231111110 01124667778888888888
Q ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 290 GASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 290 ~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
+..|- |++.+...+.+|... ....++..|+.|.....-+-..|+.
T Consensus 79 v~~ld---d~~~l~~~l~~L~~~------H~~~~~V~p~~f~~~~~~Ll~~l~~ 123 (148)
T 1yhu_C 79 INALD---DIPTLESMLDHLAGQ------HAVRDGVTGAGFQLMATVLMESLPQ 123 (148)
T ss_dssp HHGGG---CHHHHHHHHHHHHHH------HHTSTTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHcC---CHHHHHHHHHHHHHH------HccccCCCHHHHHHHHHHHHHHHHH
Confidence 87765 455555544444321 1122677888888877777666654
No 17
>2vhb_A Hemoglobin; heme, respiratory protein, oxygen transport; HET: HEM; 1.76A {Vitreoscilla stercoraria} SCOP: a.1.1.2 PDB: 1vhb_A* 3vhb_A* 4vhb_A*
Probab=50.36 E-value=77 Score=25.57 Aligned_cols=19 Identities=5% Similarity=0.335 Sum_probs=15.6
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVSD 241 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~ 241 (367)
+||++++++++...+.++.
T Consensus 1 ~lt~~~~~~v~~sw~~v~~ 19 (146)
T 2vhb_A 1 MLDQQTINIIKATVPVLKE 19 (146)
T ss_dssp -CCHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHH
Confidence 3799999999999988853
No 18
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=49.65 E-value=1.3e+02 Score=25.93 Aligned_cols=120 Identities=10% Similarity=-0.015 Sum_probs=67.6
Q ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCC---------CCC--chhhHHHHHHHHHhhhhhhhHHhH
Q 017703 223 DLSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPD---------DGG--KFVDTLERLLKLCQGIGVQIDELG 290 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~---------~~~--~~v~~LD~L~~~~~~i~~~VDeL~ 290 (367)
.||++|+.+++...+.++.- ..+-. ....++|.. .|. +.+ +.+..=.++..+...|...++.++
T Consensus 21 ~Ls~~e~~~V~~sW~~v~~~~~~~g~---~~y~rlF~~-~P~~k~~F~~f~d~~~~~~l~~n~~~~~h~~~v~~al~~~v 96 (193)
T 2dc3_A 21 ELSEAERKAVQAMWARLYANCEDVGV---AILVRFFVN-FPSAKQYFSQFKHMEDPLEMERSPQLRKHACRVMGALNTVV 96 (193)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHHHH---HHHHHHHHH-CGGGGGGCTTTTTCCCHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHHH---HHHHHHHHH-CHHHHHHHHhccCCCcHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999887532 11111 223344432 221 100 011122345678888888899988
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 017703 291 ASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEA 358 (367)
Q Consensus 291 sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (367)
..|- |++.+...+.+|... ...+++..|+.|.....-|..+|+. .|+..-|.++..
T Consensus 97 ~~Ld---d~~~l~~~l~~L~~~------H~~~~gV~p~~f~~~~~~Ll~~l~~---~lg~~~t~e~~~ 152 (193)
T 2dc3_A 97 ENLH---DPDKVSSVLALVGKA------HALKHKVEPVYFKILSGVILEVVAE---EFASDFPPETQR 152 (193)
T ss_dssp HTTT---CHHHHHHHHHHHHHH------HHHTSCCCHHHHHHHHHHHHHHHHH---HTGGGCCHHHHH
T ss_pred HhcC---CHHHHHHHHHHHHHH------HHHHcCCCHHHHHHHHHHHHHHHHH---HhhccCCHHHHH
Confidence 8875 555566555554422 1125567777777766666555543 455445555443
No 19
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=48.03 E-value=1.1e+02 Score=24.92 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC----------chhhHHHHHHHHHhhhhhhhHHhHhcc
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG----------KFVDTLERLLKLCQGIGVQIDELGASL 293 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~----------~~v~~LD~L~~~~~~i~~~VDeL~ssl 293 (367)
||++|+.+++...+.++.-..-+ ......++|+ ..|.... +.+..=.++..+...|...+++++..|
T Consensus 1 Lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~l 77 (151)
T 2c0k_A 1 MNSEEVNDIKRTWEVVAAKMTEA--GVEMLKRYFK-KYPHNLNHFPWFKEIPFDDLPENARFKTHGTRILRQVDEGVKAL 77 (151)
T ss_dssp CCHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHH-HCGGGGGGCHHHHTSCGGGGGGCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHhhHHHH--HHHHHHHHHH-HCHHHHHHHHHhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 68999999999998874322111 1122234444 2221111 111223456678888888888888887
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 017703 294 YPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLK 342 (367)
Q Consensus 294 Ypp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~ 342 (367)
--+-+++.+...+.+|... =..++..|+.|.....-+..+|+
T Consensus 78 d~~~~~~~l~~~l~~L~~~-------H~~~~V~p~~f~~~~~~Ll~~l~ 119 (151)
T 2c0k_A 78 SVDFGDKKFDDVWKKLAQT-------HHEKKVERRSYNELKDIIIEVVC 119 (151)
T ss_dssp CGGGCCHHHHHHHHHHHHH-------HTTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHH-------HhhCCCCHHHHHHHHHHHHHHHH
Confidence 5333555555555544321 12245566666655555555443
No 20
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=47.06 E-value=80 Score=32.01 Aligned_cols=145 Identities=21% Similarity=0.205 Sum_probs=87.5
Q ss_pred hhhhhcCCcccHHHHHHHHHHHHHHHHHHHH--HHHhhccCCCCccccccCCCccccccCcccCCCCCcccCCCCCCHHH
Q 017703 151 CSALKKTPATNITAIGRAMTQVAVSMKDVLR--EMKELKPSSSDQNNEASHDDSAKADSEHQEDDNSSLDELGNDLSSEE 228 (367)
Q Consensus 151 CD~l~~lp~~N~~av~~~~~~~~~lvkDale--EleE~~e~~~~~~~e~s~d~~~~~d~~~d~de~~ddd~~~~~~seee 228 (367)
+|+-.-+|+++..+=+..+.....++-+-+. |+.+|++.... + ...+++.+
T Consensus 28 WD~~t~mP~~g~~~R~e~~a~Ls~~~h~~~t~~~~~~ll~~~~~---~------------------------~~~l~~~~ 80 (505)
T 3dwc_A 28 WDSHTMMPCKGSDARGAAMAELQLHMHDTITAPKIRALIEEAEK---S------------------------VGDLEKLQ 80 (505)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH---T------------------------GGGSCHHH
T ss_pred hhhhhcCCccchHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---c------------------------ccCCCHHH
Confidence 5678889999888777777777777766665 88888865310 0 00134455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-------c-CCCCCCchhhHHHHHHHHHhhhhhhhH--------HhHhc
Q 017703 229 MKVAQLAIGIVSDMLVVIKELIRTITGLLKH-------E-NPDDGGKFVDTLERLLKLCQGIGVQID--------ELGAS 292 (367)
Q Consensus 229 ~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~-------~-~~~~~~~~v~~LD~L~~~~~~i~~~VD--------eL~ss 292 (367)
+..++-+..-.+....+=..++..+.++-.. . ..++-..+...|++++++.+++..... |.-..
T Consensus 81 ~a~lr~~~r~~~~~~~iP~elv~~~~~~~s~~~~~W~~Ar~~nDf~~F~P~L~~vv~l~re~A~~~~~~~~~~pYDaLLd 160 (505)
T 3dwc_A 81 RANLREMRRAWELENLLPEEFVERKTVLTTKAHQVWKTCREKNDFAGFLPTLKELIALFREEGKLRAGNSGKHPYEALVD 160 (505)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCcccCCCcHHHHHH
Confidence 5555544333222221111111111111000 0 112333588999999999999887655 44556
Q ss_pred cC-CCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 017703 293 LY-PPQELSVIKAGSVKILSMTDELQKEVES 322 (367)
Q Consensus 293 lY-pp~d~~~v~~~~~~L~~~l~k~~~~i~~ 322 (367)
.| |.+....+..-...|...+..++..|..
T Consensus 161 ~yEpg~t~~~ld~iF~~lk~~L~~Ll~~i~~ 191 (505)
T 3dwc_A 161 IYEPGMTLQRLDEIFGNVRSWLPELLKEVQE 191 (505)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68 8899888888888888888777777743
No 21
>3pt8_B Hemoglobin III; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} PDB: 3pt7_B*
Probab=46.80 E-value=1.2e+02 Score=24.72 Aligned_cols=108 Identities=11% Similarity=0.025 Sum_probs=62.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhh-----HH------HHHHHHHhhhhhhhHHhHh
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFVD-----TL------ERLLKLCQGIGVQIDELGA 291 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v~-----~L------D~L~~~~~~i~~~VDeL~s 291 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|.....+.. .. .++..+...+...++.++.
T Consensus 3 ~Ls~~~~~~i~~sw~~v~~~~~~~--g~~~y~~lF~-~~P~~k~~F~~~f~~~~~~~l~~n~~~~~h~~~v~~~l~~~v~ 79 (152)
T 3pt8_B 3 GLTGPQKAALKSSWSRFMNNAVTN--GTNFYMDLFK-AYPDTLTPFKSLFQNVSFNQMTNHPTMKAQSLVFCNGMSSFVD 79 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHH-HCGGGGGGGTTTTTTCCHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhCHHhH--HHHHHHHHHH-HChhHHHHhhHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 589999999999998874332211 1112234443 22311111111 11 2577888899999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 292 SLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 292 slYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
.+- |++.+...+.+|... =.+++..|+.|.....-+..+|+.
T Consensus 80 ~ld---d~~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~ll~~l~~ 121 (152)
T 3pt8_B 80 NLD---DHEVLVVLLQKMAKL-------HFNRGIRIKELRDGYGTLLRYLED 121 (152)
T ss_dssp TTT---CHHHHHHHHHHHHHH-------HHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred hCC---CHHHHHHHHHHHHHH-------HhcCCCCHHHHHHHHHHHHHHHHH
Confidence 874 555555555544321 124567777777777766666655
No 22
>2jx0_A ARF GTPase-activating protein GIT1; paxillin binding domain homologue, ANK repeat, cytoplasm, GTPase activation, metal-binding; NMR {Rattus norvegicus}
Probab=46.64 E-value=1.3e+02 Score=25.11 Aligned_cols=74 Identities=16% Similarity=0.281 Sum_probs=55.4
Q ss_pred HHHHHHHHhhhhhhhHHhHhccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-----------HHHHHHHHHHHH
Q 017703 272 LERLLKLCQGIGVQIDELGASLYPPQ-ELSVIKAGSVKILSMTDELQKEVESFNSSS-----------EAFIQACNGLRS 339 (367)
Q Consensus 272 LD~L~~~~~~i~~~VDeL~sslYpp~-d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~-----------~~~~~~~~~~~~ 339 (367)
=++..-++..|...|.|+++ |||+. ..++++..+..|......+..+=+++..+. ....+..=.+-+
T Consensus 42 ~~sfvpcserI~~AV~el~a-Lfp~~p~~etvr~sL~~L~~~a~~Lq~EC~~~q~~~~~~~~~iq~~tqqVi~cAYdIAk 120 (135)
T 2jx0_A 42 HDSFVPCSEKIHLAVTEMAS-LFPKRPALEPVRSSLRLLNASAYRLQSECRKTVPPEPGAPVDFQLLTQQVIQCAYDIAK 120 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TSCSSBCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHH-hcCCCCCchHHHHHHHHHHHHHHHHHHHHHccCCCcccCcchhHHHHHHHHHHHHHHHH
Confidence 46788889999999999985 57543 478899999999999999999998873222 234444555667
Q ss_pred HHHHHHh
Q 017703 340 SLKQMDS 346 (367)
Q Consensus 340 ~~~~~~~ 346 (367)
|.|+|..
T Consensus 121 AaK~Lvt 127 (135)
T 2jx0_A 121 AAKQLVT 127 (135)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 23
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=44.04 E-value=1.2e+02 Score=24.32 Aligned_cols=109 Identities=16% Similarity=0.099 Sum_probs=64.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCc-----h--hh---HHHHHHHHHhhhhhhhHHhHhc
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGK-----F--VD---TLERLLKLCQGIGVQIDELGAS 292 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~-----~--v~---~LD~L~~~~~~i~~~VDeL~ss 292 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|..... . .+ .=..+..+...+...++.++..
T Consensus 2 ~Lt~~~~~~v~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ 78 (147)
T 1mba_A 2 SLSAAEADLAGKSWAPVFANKNAN--GLDFLVALFE-KFPDSANFFADFKGKSVADIKASPKLRDVSSRIFTRLNEFVNN 78 (147)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHHHH--HHHHHHHHHH-HCGGGGGGCTTTTTCCHHHHHTCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcHHHh--HHHHHHHHHH-hCchHHHhhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999998884322111 1122334444 22211000 0 01 1114667788888888888888
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHH
Q 017703 293 LYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQM 344 (367)
Q Consensus 293 lYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (367)
+- |++.+...+.+|.. .=.+++..|+.|.....-+..+|+..
T Consensus 79 ld---~~~~l~~~l~~L~~-------~H~~~gV~p~~f~~~~~~ll~~l~~~ 120 (147)
T 1mba_A 79 AA---NAGKMSAMLSQFAK-------EHVGFGVGSAQFENVRSMFPGFVASV 120 (147)
T ss_dssp TT---CHHHHHHHHHHHHH-------HHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CC---CHHHHHHHHHHHHH-------HhhcCCCCHHHHHHHHHHHHHHHHHh
Confidence 75 55555554444432 22256888999998888888888775
No 24
>1x9f_A Globin IV, extracellular; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_A*
Probab=43.97 E-value=1.2e+02 Score=24.92 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhhhccCCCCCCchh------hHHHHHHHHHhhhhhhhHHhH
Q 017703 223 DLSSEEMKVAQLAIGIVSDM------LVVIKELIRTITGLLKHENPDDGGKFV------DTLERLLKLCQGIGVQIDELG 290 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~------~~~lK~lir~i~~~lk~~~~~~~~~~v------~~LD~L~~~~~~i~~~VDeL~ 290 (367)
.+|++|+..++...+.++.- ..+-. ....++|+. .|.....+. ..=.++..+...+...++.++
T Consensus 6 ~ls~~~~~~V~~sw~~v~~~~~~~~~~~~g~---~~~~rlF~~-~P~~k~~F~~~~~~~~~n~~~~~h~~~v~~al~~~v 81 (151)
T 1x9f_A 6 CCSYEDRREIRHIWDDVWSSSFTDRRVAIVR---AVFDDLFKH-YPTSKALFERVKIDEPESGEFKSHLVRVANGLKLLI 81 (151)
T ss_dssp CCCHHHHHHHHHHHHHHSCCSSSHHHHHHHH---HHHHHHHHH-CGGGGGGGTTTTTTSTTSSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHcccccchHHHHHH---HHHHHHHHH-CHHHHHhhhcccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999888322 11111 122333331 221100000 001245667777777777777
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 291 ASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 291 sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
..|- |++.+...+.+|... ....++..|+.|.....-+-..|+.
T Consensus 82 ~~ld---d~~~l~~~l~~L~~~------H~~~lgV~p~~f~~~~~~ll~~l~~ 125 (151)
T 1x9f_A 82 NLLD---DTLVLQSHLGHLADQ------HIQRKGVTKEYFRGIGEAFARVLPQ 125 (151)
T ss_dssp TTTT---CHHHHHHHHHHHHHH------HHTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHcC---CHHHHHHHHHHHHHH------hccccCCCHHHHHHHHHHHHHHHHH
Confidence 7764 455555544444322 1122567777777777666665543
No 25
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=43.71 E-value=1.2e+02 Score=24.72 Aligned_cols=120 Identities=15% Similarity=0.154 Sum_probs=67.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC---------CCCchhhHHHHHHHHHhhhhhhhHHhHhcc
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPD---------DGGKFVDTLERLLKLCQGIGVQIDELGASL 293 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~---------~~~~~v~~LD~L~~~~~~i~~~VDeL~ssl 293 (367)
.||++|+.+++...+.++.-..-+- .....++|. ..|. +.+. .+.=.++..+...+...++..+..|
T Consensus 12 ~ls~~~~~~I~~sw~~v~~~~~~~g--~~~y~rlF~-~~P~~k~~F~~f~~~~~-~~~~~~~~~h~~~v~~al~~~v~~l 87 (152)
T 4hrt_B 12 VSNADQKDLLRMSWGVLSVDMEGTG--LMLMANLFK-TSPSAKGKFARLGDVSA-GKDNSKLRGHSITLMYALQNFVDAL 87 (152)
T ss_dssp HHCHHHHHHHHHHHHHHTTTHHHHH--HHHHHHHHH-HCTHHHHHTGGGCCCC----CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHH-HCHhHHHhhHHhCCCCc-cccCHHHHHHHHHHHHHHHHHHHHC
Confidence 3689999999999888732211110 112223333 1120 1000 0023457778888888889888887
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 294 YPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 294 Ypp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
- |++.+...+.+|... =.+++..|+.|.....-+...|+ ..|+..-|.++..-
T Consensus 88 d---d~~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~A 140 (152)
T 4hrt_B 88 D---DVERLKCVVEKFAVN-------HINRQISADEFGEIVGPLRQTLK---ARMGNYFDEDTVAA 140 (152)
T ss_dssp T---CHHHHHHHHHHHHHH-------HHC-CCCHHHHGGGHHHHHHHHH---HHHGGGCCHHHHHH
T ss_pred C---CHHHHHHHHHHHHHH-------HhhCCCCHHHHHHHHHHHHHHHH---HHhcccCCHHHHHH
Confidence 4 555566655554422 24567788888777766655544 45665555555543
No 26
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=42.36 E-value=59 Score=24.58 Aligned_cols=43 Identities=12% Similarity=0.297 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 308 KILSMTDELQKEVESF-----NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 308 ~L~~~l~k~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
.|...+..|-..+..+ +.....|......|+....+|..-|..
T Consensus 18 ~i~~~l~~l~~~v~~l~~~W~G~Aa~af~~~~~~w~~~a~~l~~~L~~ 65 (94)
T 4i0x_A 18 QMRAGSNSLDRDVQSLFGVWKGSAADAYRSGWDEMQDGATKVWNALTD 65 (94)
T ss_dssp HHHHHHHHHHHHHHHGGGTCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444 346779999999999999999998873
No 27
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A
Probab=42.03 E-value=2.7e+02 Score=28.18 Aligned_cols=149 Identities=12% Similarity=0.022 Sum_probs=90.6
Q ss_pred hhhhhhcCCcccHHHHHHHHHHHHHHHHHHHH--HHHhhccCCCCccccccCCCccccccCcccCCCCCcccCCCCCCHH
Q 017703 150 ACSALKKTPATNITAIGRAMTQVAVSMKDVLR--EMKELKPSSSDQNNEASHDDSAKADSEHQEDDNSSLDELGNDLSSE 227 (367)
Q Consensus 150 aCD~l~~lp~~N~~av~~~~~~~~~lvkDale--EleE~~e~~~~~~~e~s~d~~~~~d~~~d~de~~ddd~~~~~~see 227 (367)
.+|+-.-+|+++..+=+..+.....++-+-+. |+.+|++..... .. ...+++.
T Consensus 28 ~WD~~t~mP~~g~~~R~e~~a~L~~~~h~~~t~~~~~~~l~~~~~~-~~------------------------~~~l~~~ 82 (509)
T 3hoa_A 28 AWDQRTMIPKKGHEHRARQMAALARLLHQRMTDPRIGEWLEKVEGS-PL------------------------VQDPLSD 82 (509)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTS-GG------------------------GSSTTSH
T ss_pred hhhhhhcCCCCchHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhc-cc------------------------cCCCCHH
Confidence 35677889999888777777777777776665 888888653200 00 0012344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------ccC-CCCCCchhhHHHHHHHHHhhhhhhhHH-----------
Q 017703 228 EMKVAQLAIGIVSDMLVVIKELIRTITGLLK-------HEN-PDDGGKFVDTLERLLKLCQGIGVQIDE----------- 288 (367)
Q Consensus 228 e~~~~~~~~~lvk~~~~~lK~lir~i~~~lk-------~~~-~~~~~~~v~~LD~L~~~~~~i~~~VDe----------- 288 (367)
++..++-+..-.+....+=..++..+.+.-. ... .++-..+...|++++++.+++......
T Consensus 83 ~~a~lr~~~r~~~~~~~iP~~lv~~~~~~~s~~~~~W~~Ar~~~Df~~F~P~L~~vv~l~re~A~~~~~~~~~~~~~~~~ 162 (509)
T 3hoa_A 83 AAVNVREWRQAYERARAIPERLAVELAQAESEAESFWEEARPRDDWRGFLPYLKRVYALTKEKAEVLFALPPAPGDPPYG 162 (509)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTSCCCC
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCcccccccccCCC
Confidence 5555555443332222221111212111110 011 233345889999999999998766543
Q ss_pred ----hHhccC-CCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017703 289 ----LGASLY-PPQELSVIKAGSVKILSMTDELQKEVESF 323 (367)
Q Consensus 289 ----L~sslY-pp~d~~~v~~~~~~L~~~l~k~~~~i~~~ 323 (367)
.-...| |.+....+..-...|...+..++..|...
T Consensus 163 ~~YDaLLd~yEpg~t~~~ld~iF~~Lk~~l~~Ll~~i~~~ 202 (509)
T 3hoa_A 163 ELYDALLDGYEPGMRARELLPLFAELKEGLKGLLDRILGS 202 (509)
T ss_dssp SHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344557 88888989998888888888888888654
No 28
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=41.88 E-value=81 Score=31.95 Aligned_cols=147 Identities=17% Similarity=0.147 Sum_probs=88.4
Q ss_pred hhhhhhcCCcccHHHHHHHHHHHHHHHHHHHH--HHHhhccCCCCccccccCCCccccccCcccCCCCCcccCCCCCCHH
Q 017703 150 ACSALKKTPATNITAIGRAMTQVAVSMKDVLR--EMKELKPSSSDQNNEASHDDSAKADSEHQEDDNSSLDELGNDLSSE 227 (367)
Q Consensus 150 aCD~l~~lp~~N~~av~~~~~~~~~lvkDale--EleE~~e~~~~~~~e~s~d~~~~~d~~~d~de~~ddd~~~~~~see 227 (367)
.+|+-.-+|+++..+=+..+.....++-.-+. ++.+|++..... ...+++.
T Consensus 28 ~WD~~t~mP~~g~~~R~e~~a~Ls~~~h~~~t~~~~~~~l~~~~~~---------------------------~~~l~~~ 80 (501)
T 3hq2_A 28 HWDSRTGAPKNGSEDRAESIGQLSTDIFNIQTSDRMKELIDVLYER---------------------------FDDLSED 80 (501)
T ss_dssp HHHHTTTCCTTSHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHT---------------------------GGGSCHH
T ss_pred HHhhhccCCCCchHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc---------------------------ccCCCHH
Confidence 35677889999888777777776766666655 888887643100 0012445
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhh----ccCCCCCCchhhHHHHHHHHHhhhhhhhH------HhHhcc
Q 017703 228 EMKVAQLAIGIVSDMLV----VIKELIRTITGLLK----HENPDDGGKFVDTLERLLKLCQGIGVQID------ELGASL 293 (367)
Q Consensus 228 e~~~~~~~~~lvk~~~~----~lK~lir~i~~~lk----~~~~~~~~~~v~~LD~L~~~~~~i~~~VD------eL~ssl 293 (367)
++..++-+..-.+.... .++++.+.....-. ....++-..+...|++++++.+++..... |.-...
T Consensus 81 ~~a~lr~~~r~~~~~~~iP~~lv~~~~~~~s~~~~~W~~Ar~~nDf~~F~P~L~~vv~l~re~A~~~~~~~~pYDaLLd~ 160 (501)
T 3hq2_A 81 TKKAVELAKKEYEENKKIPEAEYKEYVILCSKAETAWEEAKGKSDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDL 160 (501)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHCCSSCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHh
Confidence 55555444322221111 11111111111000 00123334588999999999999987754 445556
Q ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017703 294 Y-PPQELSVIKAGSVKILSMTDELQKEVESF 323 (367)
Q Consensus 294 Y-pp~d~~~v~~~~~~L~~~l~k~~~~i~~~ 323 (367)
| |.+....+..-...|...+..++..|.+.
T Consensus 161 yEpg~t~~~ld~iF~~Lk~~l~~Li~~i~~~ 191 (501)
T 3hq2_A 161 FEPGVTVKVLDQLFAELKEAIIPLVKQVTAS 191 (501)
T ss_dssp HSTTCCHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7 88888889888888888888888888653
No 29
>2wy4_A Single domain haemoglobin; heme, transport, oxygen transport; HET: HEM; 1.35A {Campylobacter jejuni}
Probab=41.59 E-value=1.3e+02 Score=23.83 Aligned_cols=106 Identities=9% Similarity=0.076 Sum_probs=55.0
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHH
Q 017703 224 LSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVI 302 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v 302 (367)
||++++++++...+.++.- ..+.. ....++|+ ..|....-+...=+++..+.+.+...++.++..+. +++.+
T Consensus 1 lt~~~~~~v~~sw~~v~~~~~~~~~---~fy~rlf~-~~P~~~~~F~~~~~~~~~q~~~~~~~l~~~v~~ld---~~~~l 73 (140)
T 2wy4_A 1 MTKEQIQIIKDCVPILQKNGEDLTN---EFYKIMFN-DYPEVKPMFNMEKQISGEQPKALAMAILMAAKNIE---NLENM 73 (140)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-HCGGGGGGSCHHHHHTSHHHHHHHHHHHHHHHTTT---CGGGG
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHHH-HChHHHHhcCcCcccHHHHHHHHHHHHHHHHHhcc---CHHHH
Confidence 5889999999998887532 22222 23334443 23322111210002344556677777777777764 44444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 303 KAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 303 ~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
...+.+|... =.+++..|+.|..+..-+..+|+.
T Consensus 74 ~~~l~~l~~~-------H~~~gv~p~~f~~~~~~ll~~l~~ 107 (140)
T 2wy4_A 74 RSFVDKVAIT-------HVNLGVKEEHYPIVGACLLKAIKN 107 (140)
T ss_dssp HHHHHHHHHH-------HHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHHcCCCHHHHHHHHHHHHHHHHH
Confidence 4433333322 123456666666666666555544
No 30
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=40.66 E-value=1.5e+02 Score=24.10 Aligned_cols=109 Identities=13% Similarity=0.081 Sum_probs=65.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC-----------chhhHHHHHHHHHhhhhhhhHHhHh
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG-----------KFVDTLERLLKLCQGIGVQIDELGA 291 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~-----------~~v~~LD~L~~~~~~i~~~VDeL~s 291 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|.... +.+..=.++..+...+...++.++.
T Consensus 10 ~lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~ 86 (149)
T 2lhb_A 10 PLSAAEKTKIRSAWAPVYSTYETS--GVDILVKFFT-STPAAQEFFPKFKGLTTADELKKSADVRWHAERIINAVDDAVA 86 (149)
T ss_dssp CCCHHHHHHHHHHHHHHHHTHHHH--HHHHHHHHHH-HCGGGGGGCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHccHHHH--HHHHHHHHHH-HCHhHHHHhhhhcCCCCHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 489999999999998885422211 1123334444 2221110 0111223466888889999999998
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 292 SLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 292 slYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
.|- |++.+...+.+|... ....++..|+.|.....-+..+|+.
T Consensus 87 ~ld---d~~~l~~~l~~L~~~------H~~~~~V~p~~f~~~~~~Ll~~l~~ 129 (149)
T 2lhb_A 87 SMD---DTEKMSMKLRNLSGK------HAKSFQVDPEYFKVLAAVIADTVAA 129 (149)
T ss_dssp TTT---CHHHHHHHHHHHHHH------HHHTSCCCGGGHHHHHHHHHHHHHT
T ss_pred hcC---CHHHHHHHHHHHHHH------HhhccCCCHHHHHHHHHHHHHHHHH
Confidence 875 556565555544432 1123688888888887777766654
No 31
>3h6p_C ESAT-6-like protein ESXR; four-helix bundle, structural genomics, PSI-2, protein struc initiative, TB structural genomics consortium; 1.91A {Mycobacterium tuberculosis} PDB: 2kg7_B 3q4h_B
Probab=39.89 E-value=41 Score=25.37 Aligned_cols=52 Identities=6% Similarity=0.061 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 299 LSVIKAGSVKILSMTDELQKEVESF-----NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 299 ~~~v~~~~~~L~~~l~k~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
..++......|...+..|-..|..+ +...+.|..+-.+|..+...|..-|..
T Consensus 15 a~~i~~~~~~i~~~l~~l~~~v~~L~~~W~G~A~~ay~~~~~~W~~~~~~l~~~L~~ 71 (96)
T 3h6p_C 15 AGDMAGYAGTLQSLGADIASEQAVLSSAWQGDTGITYQGWQTQWNQALEDLVRAYQS 71 (96)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHTGGGCCTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666677777777777777776 457889999999999999999887763
No 32
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=35.83 E-value=1.8e+02 Score=23.72 Aligned_cols=120 Identities=8% Similarity=0.065 Sum_probs=67.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC---------C-CCchhhHHHHHHHHHhhhhhhhHHhHhc
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPD---------D-GGKFVDTLERLLKLCQGIGVQIDELGAS 292 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~---------~-~~~~v~~LD~L~~~~~~i~~~VDeL~ss 292 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|. + ..+.+..=.++..+...+...++.++..
T Consensus 12 ~lt~~~~~~i~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ 88 (158)
T 1hlb_A 12 DLTLAQKKIVRKTWHQLMRNKTSF--VTDVFIRIFA-YDPSAQNKFPQMAGMSASQLRSSRQMQAHAIRVSSIMSEYVEE 88 (158)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCTTH--HHHHHHHHHH-HCTHHHHTSGGGTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHhCHHHH--HHHHHHHHHH-HCHHHHHHhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999998885311111 0012223333 2221 1 0000112234677888888888888888
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 293 LYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 293 lYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
+- + +.+...+.+|... =..++..|+.|.....-+..+|+. .++..-|.++..-
T Consensus 89 ld---~-~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~ll~~l~~---~lg~~~t~e~~~A 141 (158)
T 1hlb_A 89 LD---S-DILPELLATLART-------HDLNKVGADHYNLFAKVLMEALQA---ELGSDFNEKTRDA 141 (158)
T ss_dssp CC---T-TSHHHHTHHHHHH-------HHHTTCCHHHHHHHHHHHHHHHHH---HHTTCCCTHHHHH
T ss_pred CC---c-HHHHHHHHHHHHH-------hhccCCCHHHHHHHHHHHHHHHHH---HhccCCCHHHHHH
Confidence 65 3 4455544444322 223577888888887777666654 5665556565543
No 33
>4hrt_A Globin-2 A chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_A*
Probab=34.98 E-value=1.8e+02 Score=23.62 Aligned_cols=121 Identities=14% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC--------chhhHHHHHHHHHhhhhhhhHHhHhccC
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG--------KFVDTLERLLKLCQGIGVQIDELGASLY 294 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~--------~~v~~LD~L~~~~~~i~~~VDeL~sslY 294 (367)
.||++|+.+++...+.++.-..-+ ......++|. ..|.... ...+.=.++..+...+...++.++..+-
T Consensus 10 ~ls~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~~~~~~~~~~~~~~H~~~v~~al~~~v~~ld 86 (150)
T 4hrt_A 10 CGSEAIKANLRRSWGVLSADIEAT--GLMLMSNLFT-LRPDTKTYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDSLD 86 (150)
T ss_dssp HTCHHHHHHHHHHHHHHTTCHHHH--HHHHHHHHHH-HCGGGGGGGGGGCCGGGGGGSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHhCHHHH--HHHHHHHHHH-HCHHHHHHHHHcCCCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 479999999999998873221111 0112233343 2221100 0111123677788888888999998875
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 295 PPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 295 pp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
|++.+...+. ++...-++++..|+.|.....-+-..|+ ..|+..-|.++..-
T Consensus 87 ---d~~~L~~~l~-------~l~~~H~~~gV~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~A 138 (150)
T 4hrt_A 87 ---DPSRLKCVVE-------KFAVNHINRKISGDAFGAIVEPMKETLK---ARMGNYYSDDVAGA 138 (150)
T ss_dssp ---CHHHHHHHHH-------HHHHHHHHTTCCHHHHGGGHHHHHHHHH---HHHGGGCCHHHHHH
T ss_pred ---CHHHHHHHHH-------HHHHHHhhcCCCHHHHHHHHHHHHHHHH---HHhcccCCHHHHHH
Confidence 4444444433 3333334667888888777766655544 45666566665543
No 34
>1gdj_A Leghemoglobin (deoxy); oxygen transport; HET: HEM; 1.70A {Lupinus luteus} SCOP: a.1.1.2 PDB: 1gdi_A* 1gdk_A* 1gdl_A* 1lh1_A* 1lh2_A* 1lh3_A* 1lh5_A* 1lh6_A* 1lh7_A* 2gdm_A* 2lh1_A* 2lh2_A* 2lh3_A* 2lh5_A* 2lh6_A* 2lh7_A*
Probab=34.10 E-value=1.8e+02 Score=23.32 Aligned_cols=18 Identities=6% Similarity=0.082 Sum_probs=15.7
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVS 240 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk 240 (367)
.||++++.+++...+.++
T Consensus 2 ~lt~~~~~~v~~sw~~v~ 19 (153)
T 1gdj_A 2 ALTESQAALVKSSWEEFN 19 (153)
T ss_dssp CSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 479999999999998875
No 35
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=33.90 E-value=1.1e+02 Score=25.27 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=7.8
Q ss_pred HHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHH
Q 017703 276 LKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTD 314 (367)
Q Consensus 276 ~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~ 314 (367)
..+..+|...|-.+++. |.....+...+......++
T Consensus 54 ~~~~~eL~~~i~~lGg~---p~~~~s~~g~~hr~~~~lk 89 (153)
T 4etr_A 54 AAAADELERIVLELGGK---PKDSTSFAGDLHRRWVDLK 89 (153)
T ss_dssp HHHHHHHHHHHHHTTCC---C------------------
T ss_pred HHHHHHHHHHHHHhCCC---CCCCCcHHHHHHHHHHHHH
Confidence 34444444444444433 3344445555544444433
No 36
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=33.56 E-value=1e+02 Score=23.19 Aligned_cols=49 Identities=14% Similarity=0.161 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-----cCCcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 302 IKAGSVKILSMTDELQKEVESF-----NSSSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 302 v~~~~~~L~~~l~k~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
+......|...+..|-..+..+ +...+.|..+...|.....+|..-|..
T Consensus 19 ~~~~~~~l~~~l~~l~~~~~~L~~~W~G~A~~af~~~~~~w~~~~~~l~~~L~~ 72 (101)
T 3fav_A 19 FERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDE 72 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555555555 235679999999999999999988873
No 37
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=33.44 E-value=2.3e+02 Score=26.72 Aligned_cols=105 Identities=11% Similarity=0.133 Sum_probs=50.3
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHH
Q 017703 224 LSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVI 302 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v 302 (367)
||++++++++...+.++.- ..+.. ....++|. ..|....-+...=.++-.+.+.+...++.++..+- +.+.+
T Consensus 2 ls~~~~~~v~~sw~~v~~~~~~~~~---~fy~rlf~-~~P~~~~~F~~~~~~~~~~~~~~~~~l~~~~~~ld---~~~~l 74 (403)
T 1cqx_A 2 LTQKTKDIVKATAPVLAEHGYDIIK---CFYQRMFE-AHPELKNVFNMAHQEQGQQQQALARAVYAYAENIE---DPNSL 74 (403)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHHHHH---HHHHHHHH-HCGGGGGTSCCSCCCHHHHHHHHHHHHHHHHHHTT---CHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHHH-hChHHHhhCcccchhhHHHHHHHHHHHHHHHHhcc---CHHHH
Confidence 7999999999999888532 22222 23334443 22211000000001234556666666666666543 44445
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 017703 303 KAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLK 342 (367)
Q Consensus 303 ~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~ 342 (367)
...+.+|... =.+++..|+.|.....-|..+|+
T Consensus 75 ~~~l~~l~~~-------H~~~gv~~~~f~~~~~~Ll~~l~ 107 (403)
T 1cqx_A 75 MAVLKNIANK-------HASLGVKPEQYPIVGEHLLAAIK 107 (403)
T ss_dssp HHHHHHHHHH-------HHHHTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHhcCCCHHHHHHHHHHHHHHHH
Confidence 4444443322 11334455555554444444443
No 38
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=32.92 E-value=1.4e+02 Score=28.44 Aligned_cols=20 Identities=5% Similarity=0.194 Sum_probs=16.1
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVSDM 242 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~ 242 (367)
+||++++++++...+.++.-
T Consensus 1 ~ls~~~~~~i~~sw~~~~~~ 20 (399)
T 4g1v_A 1 MLAEKTRSIIKATVPVLEQQ 20 (399)
T ss_dssp -CCHHHHHHHHHTHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHhh
Confidence 37999999999999887543
No 39
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=32.55 E-value=2.5e+02 Score=24.45 Aligned_cols=69 Identities=9% Similarity=0.120 Sum_probs=46.4
Q ss_pred HHHhhhhccCCCCC-Cc-hhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017703 252 TITGLLKHENPDDG-GK-FVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESF 323 (367)
Q Consensus 252 ~i~~~lk~~~~~~~-~~-~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~ 323 (367)
++..+|..-.|... .. ..+.+..|+..|+...+.|=.|+... .+.+++...+-.++..+..++..-+.+
T Consensus 87 LL~EML~~~~pg~~~~~~d~Ell~eL~~~Ck~~qp~i~~Li~e~---~ddee~L~elL~~ND~Ln~vl~kY~~~ 157 (186)
T 1oxz_A 87 LLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDT---EDNDEALAEILQANDNLTQVINLYKQL 157 (186)
T ss_dssp HHHHHHHHTSSSCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHhcCCCccCccccHHHHHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 44455554334322 12 46899999999999999999999874 354556666666777777776665444
No 40
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=32.12 E-value=2.9e+02 Score=24.97 Aligned_cols=123 Identities=11% Similarity=0.102 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVI 302 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v 302 (367)
.++.+|++++....+-.+.....+-..|....+++....|+. .++..=--++-.++++.=-=|-|.-.+-.+.--..|
T Consensus 92 ~l~~~D~qLL~fys~Qc~s~~~~L~~AIdaF~~sv~~nQPP~--iFVahsK~VIlsAHKLVfIGDTL~r~~~~~dvr~~V 169 (229)
T 3t6g_B 92 GLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPK--IFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQV 169 (229)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHSCCSHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCch--hhHhcCCEEEEEeeeeeeecchHHHhhccHHHHHHH
Confidence 367889999887766665555555546666666665333332 567766667777777732226666555422225567
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---cCCcH----------HHHHHHHHHHHHHHHHHhh
Q 017703 303 KAGSVKILSMTDELQKEVESF---NSSSE----------AFIQACNGLRSSLKQMDSE 347 (367)
Q Consensus 303 ~~~~~~L~~~l~k~~~~i~~~---~~~~~----------~~~~~~~~~~~~~~~~~~~ 347 (367)
......|+..|+.++.-+|.- ..++. ++......||-.|.+|..-
T Consensus 170 l~~sn~Lc~~LK~~VlATK~AAl~YPS~~AlQeMvd~v~eLs~~Aqqfr~~L~q~a~~ 227 (229)
T 3t6g_B 170 THYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQLAAA 227 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777888888888888777753 34444 3444455566666666543
No 41
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=32.04 E-value=1.8e+02 Score=22.52 Aligned_cols=53 Identities=9% Similarity=0.072 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh----cCCcHHHHHHHHHHHHHHHHHHhhhccc
Q 017703 299 LSVIKAGSVKILSMTDELQKEVESF----NSSSEAFIQACNGLRSSLKQMDSEVDCF 351 (367)
Q Consensus 299 ~~~v~~~~~~L~~~l~k~~~~i~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (367)
..+++..+..|...+..+-.-|.-. ...=.....|...+++.+.+|...+..+
T Consensus 38 ~~El~~~l~el~e~l~DL~~SI~i~e~~~~~EI~~Rk~~v~~l~~~i~~lk~~~~~~ 94 (95)
T 2c5k_T 38 EEEIQDILKDVEETIVDLDRSIIVMKRDENEDVSGREAQVKNIKQQLDALKLRFDRR 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5566666666666666555444432 2233377888888888888888877653
No 42
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=31.80 E-value=1.1e+02 Score=23.28 Aligned_cols=25 Identities=12% Similarity=0.179 Sum_probs=21.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHhhhcc
Q 017703 326 SSEAFIQACNGLRSSLKQMDSEVDC 350 (367)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (367)
..+.|..+-..|+.+...|..-|..
T Consensus 54 A~~ay~~~~~~W~~~a~~l~~~L~~ 78 (103)
T 4i0x_B 54 AAAAYSQAHKEWMDAARELVEGLSQ 78 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999999999999988873
No 43
>1sct_B Hemoglobin II (carbonmonoxy) (beta chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=31.46 E-value=2.1e+02 Score=23.15 Aligned_cols=117 Identities=15% Similarity=0.142 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCC---------CCCCchhhHHHHHHHHHhhhhhhhHHhHhccC
Q 017703 225 SSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENP---------DDGGKFVDTLERLLKLCQGIGVQIDELGASLY 294 (367)
Q Consensus 225 seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~---------~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslY 294 (367)
|++|+.+++...+.++.- ..+-. ....++|. ..| ++-+.. ..=.++..+...+...++.++..|-
T Consensus 13 t~~~~~~v~~sw~~v~~~~~~~g~---~~y~rlF~-~~P~~k~~F~~f~~~~~~-~~n~~~~~h~~~v~~al~~~v~~ld 87 (151)
T 1sct_B 13 NADQKDLLRMSWGVLSVDMEGTGL---MLMANLFK-TSPSAKGKFARLGDVSAG-KDNSKLRGHSITLMYALQNFVDALD 87 (151)
T ss_dssp CHHHHHHHHHHHHHHGGGHHHHHH---HHHHHHHH-HCHHHHHHTGGGCCGGGG-GGCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHccHHHHHH---HHHHHHHH-HCHHHHHHHHHhCCCCCc-cCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999999998887321 11111 12223332 111 010000 1223566788888888888888765
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 295 PPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 295 pp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
|++.+...+.+|.. .=..++..|+.|.....-+..+|+ ..++..-|.++..-
T Consensus 88 ---~~~~l~~~l~~L~~-------~H~~~~V~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~A 139 (151)
T 1sct_B 88 ---DVERLKCVVEKFAV-------NHINRQISADEFGEIVGPLRQTLK---ARMGNYFDEDTVAA 139 (151)
T ss_dssp ---CHHHHHHHHHHHHH-------HHHHTTCCHHHHHTTHHHHHHHHH---HHHGGGCCHHHHHH
T ss_pred ---CHHHHHHHHHHHHH-------HHHhCCCCHHHHHHHHHHHHHHHH---HHhcccCCHHHHHH
Confidence 55555555544432 222367888888888777766664 45666666666543
No 44
>1kdx_A CBP; complex (transcription activator/CO-activator), protein- protein interaction, phosphoserine recognition; HET: SEP; NMR {Mus musculus} SCOP: a.12.1.1 PDB: 1sb0_A 2agh_B 2kwf_A
Probab=30.73 E-value=1.2e+02 Score=23.03 Aligned_cols=59 Identities=8% Similarity=0.285 Sum_probs=41.0
Q ss_pred hHHhHhccCCCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCCcHHHHHH-HHHHHHHHHHH
Q 017703 286 IDELGASLYPPQELSVIKA-GSVKILSMTDELQKEVESFNSSSEAFIQA-CNGLRSSLKQM 344 (367)
Q Consensus 286 VDeL~sslYpp~d~~~v~~-~~~~L~~~l~k~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~ 344 (367)
|..|+.+++|+.++.++.+ .+..|..-.+++-..+=....+-|+++.. ..+..+-.+.|
T Consensus 19 v~Klv~aI~P~pdp~a~~d~rm~~l~~yArkvE~~~ye~A~srdeYY~llA~kiykiqKel 79 (81)
T 1kdx_A 19 VHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKEL 79 (81)
T ss_dssp HHHHHHHHSCCSSGGGGGSHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCChhhhhhHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 7788999998888777544 57778888888777776666666666654 55555554444
No 45
>3r84_A Mediator of RNA polymerase II transcription subun; four-helix bundle, nucleus; HET: MSE; 2.05A {Saccharomyces cerevisiae}
Probab=30.16 E-value=1.4e+02 Score=22.89 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhhhhhhhHHhHhcc
Q 017703 270 DTLERLLKLCQGIGVQIDELGASL 293 (367)
Q Consensus 270 ~~LD~L~~~~~~i~~~VDeL~ssl 293 (367)
+.|+.|.++=++|....+..+.++
T Consensus 5 ERL~sL~~ID~~i~sLL~~as~~i 28 (86)
T 3r84_A 5 ERLKSLNDIETQLCSMLQEASQVT 28 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666566655555555554
No 46
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2 PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Probab=29.75 E-value=2e+02 Score=22.93 Aligned_cols=118 Identities=12% Similarity=0.028 Sum_probs=61.7
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccCCC----------CCCc--hhhHHHHHHHHHhhhhhhhHHhH
Q 017703 224 LSSEEMKVAQLAIGIVSDML-VVIKELIRTITGLLKHENPD----------DGGK--FVDTLERLLKLCQGIGVQIDELG 290 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~-~~lK~lir~i~~~lk~~~~~----------~~~~--~v~~LD~L~~~~~~i~~~VDeL~ 290 (367)
||++|+++++...+.++.-. .+-. ....++|. ..|. +.+. .+..=..+..+...+...++.++
T Consensus 1 lt~~~~~~v~~sw~~v~~~~~~~g~---~~y~~lf~-~~P~~~~~F~~~~~~~~~~~~~~~~~~~~~h~~~v~~~l~~~v 76 (151)
T 1q1f_A 1 MERPESELIRQSWRVVSRSPLEHGT---VLFARLFA-LEPSLLPLFQYNGRQFSSPEDSLSSPEFLDHIRKVMLVIDAAV 76 (151)
T ss_dssp --CCSHHHHHHHHHHHHTSHHHHHH---HHHHHHHH-HCGGGGGGCCBTTBCCSSHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHH-HChHHHHhCCccccccccHHHHhhChHHHHHHHHHHHHHHHHH
Confidence 57788999999888875322 1111 12233343 1221 1001 11111246778888888888888
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 017703 291 ASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEA 358 (367)
Q Consensus 291 sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (367)
..+- |++.+...+.+|... =.+++..|+.|.....-+...|+. .++..-|.++..
T Consensus 77 ~~ld---~~~~l~~~l~~l~~~-------H~~~gV~p~~f~~~~~~ll~~l~~---~lg~~~t~e~~~ 131 (151)
T 1q1f_A 77 TNVE---DLSSLEEYLTSLGRK-------HRAVGVRLSSFSTVGESLLYMLEK---SLGPDFTPATRT 131 (151)
T ss_dssp HTSS---CSSSSHHHHHHHHHH-------HHHHTCCTTHHHHHHHHHHHHHHH---HHGGGSCHHHHH
T ss_pred HhcC---CHHHHHHHHHHHHHH-------HHHCCCCHHHHHHHHHHHHHHHHH---HhcccCCHHHHH
Confidence 8875 333334433333322 123567777777777766666544 455444555443
No 47
>1yhu_D Hemoglobin B2 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=29.10 E-value=2.3e+02 Score=22.90 Aligned_cols=107 Identities=15% Similarity=0.205 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhhhccCCCCCCch--hh----HHHHHHHHHhhhhhhhHHhH
Q 017703 223 DLSSEEMKVAQLAIGIVSDM------LVVIKELIRTITGLLKHENPDDGGKF--VD----TLERLLKLCQGIGVQIDELG 290 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~------~~~lK~lir~i~~~lk~~~~~~~~~~--v~----~LD~L~~~~~~i~~~VDeL~ 290 (367)
.+|++|+..++...+.++.- ..+-. ....++|+ ..|.....+ .. .=.++..+...|...++.++
T Consensus 3 ~~s~~~~~~v~~sw~~v~~~~~~~~~~~~g~---~~y~rlF~-~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v 78 (149)
T 1yhu_D 3 SCTTEDRREMQLMWGNVWSAQFTGRRIAIAQ---AVFKDLFA-NVPDAVGLFGAVKGDEVNSNEFKAHCIRVVNGLDSSI 78 (149)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSCSHHHHHHHH---HHHHHHHH-HCGGGGGGGGGGTSSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcccchhHHHHHHH---HHHHHHHH-HCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 47999999999999887321 11111 12233333 222111000 00 01246677777778888888
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHHHH
Q 017703 291 ASLYPPQELSVIKAGSVKILSMTDELQKEVESF-NSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 291 sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~-~~~~~~~~~~~~~~~~~~~~ 343 (367)
..|- |++.+...+.+|... =... +..|+.|.....-+..+|+.
T Consensus 79 ~~ld---~~~~l~~~l~~L~~~-------H~~~~gV~p~~f~~~~~~Ll~~l~~ 122 (149)
T 1yhu_D 79 GLLS---DPATLNEQLSHLATQ-------HKARSGVTKGGFSAIAQSFLRVMPQ 122 (149)
T ss_dssp HHTT---CHHHHHHHHHHHHHH-------HHTSTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHCC---CHHHHHHHHHHHHHH-------hccccCCCHHHHHHHHHHHHHHHHH
Confidence 7765 555555554444322 1233 67777777777666665543
No 48
>1yhu_B Giant hemoglobins B chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=28.64 E-value=2.2e+02 Score=22.64 Aligned_cols=107 Identities=7% Similarity=-0.040 Sum_probs=60.9
Q ss_pred CCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhccCCCCCCchhh------HHHHHHHHHhhhhhhhHHhHhc
Q 017703 223 DLSSEEMKVAQLAIGIVSD----MLVVIKELIRTITGLLKHENPDDGGKFVD------TLERLLKLCQGIGVQIDELGAS 292 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~----~~~~lK~lir~i~~~lk~~~~~~~~~~v~------~LD~L~~~~~~i~~~VDeL~ss 292 (367)
-+|++++.+++...+.++. ...+-. ....++|. ..|.....+.. .=.++..+...+...++.++..
T Consensus 3 ~~s~~~~~~v~~sw~~v~~~~~~~~~~g~---~~~~~lF~-~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ 78 (144)
T 1yhu_B 3 VCGPLQRLKVKRQWAEAYGSGNSREEFGH---FIWSHVFQ-HSPAARDMFKRVRGDNIHTPAFRAHATRVLGGLDMCIAL 78 (144)
T ss_dssp CCCHHHHHHHHHHHHHHTCSSSTHHHHHH---HHHHHHHH-HCGGGGGGGGGGTTTCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccccHHHHHH---HHHHHHHH-HChHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999988853 222222 12234443 22311111110 0125777888888888888888
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 293 LYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 293 lYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
|- |++.+...+.+|.. .=...+..|+.|.....-+..+|+.
T Consensus 79 ld---d~~~l~~~l~~L~~-------~H~~~gV~p~~f~~~~~~ll~~l~~ 119 (144)
T 1yhu_B 79 LD---DEPVLNTQLAHLAK-------QHETRGVEAAHYDTVNHAVMMGVEN 119 (144)
T ss_dssp TT---CHHHHHHHHHHHHH-------HHSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHHH-------HHhhcCCCHHHHHHHHHHHHHHHHH
Confidence 75 45555544444332 2223467777777777777666654
No 49
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=28.39 E-value=1.4e+02 Score=25.61 Aligned_cols=75 Identities=9% Similarity=0.051 Sum_probs=46.9
Q ss_pred chhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHH-HHHHHHHHHH
Q 017703 267 KFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFI-QACNGLRSSL 341 (367)
Q Consensus 267 ~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~-~~~~~~~~~~ 341 (367)
.++.+|-+++..=+++......++...-.|.=-..+..++..-...+..+-.++..++..|...+ .+..++-...
T Consensus 16 lf~~~L~Diy~aE~q~~~aL~~~~~~a~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~gli~e~ 91 (173)
T 2gyq_A 16 LLLHGLRDIYYAEQQITKALPKMIEQATNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIKEA 91 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Confidence 57788888888888888888888887764433444555666666666666666666665554443 3333333333
No 50
>1sct_A Hemoglobin II (carbonmonoxy) (alpha chain); oxygen transport; HET: HEM; 2.00A {Scapharca inaequivalvis} SCOP: a.1.1.2
Probab=28.09 E-value=2.4e+02 Score=22.78 Aligned_cols=119 Identities=16% Similarity=0.160 Sum_probs=69.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchh--------hHHHHHHHHHhhhhhhhHHhHhccCCC
Q 017703 225 SSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFV--------DTLERLLKLCQGIGVQIDELGASLYPP 296 (367)
Q Consensus 225 seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v--------~~LD~L~~~~~~i~~~VDeL~sslYpp 296 (367)
|++|+.+++...+.++.-..-+ ......++|. ..|.....+. ..=.++..+...+...++.++..|-
T Consensus 12 s~~~~~~v~~sw~~v~~~~~~~--g~~~~~rlF~-~~P~~k~~F~~~~d~~~~~~n~~~~~h~~~v~~al~~~v~~ld-- 86 (150)
T 1sct_A 12 SEAIKANLRRSWGVLSADIEAT--GLMLMSNLFT-LRPDTKTYFTRLGDVQKGKANSKLRGHAITLTYALNNFVDSLD-- 86 (150)
T ss_dssp CHHHHHHHHHHHHHHGGGHHHH--HHHHHHHHHH-HCGGGGGGGCTTCCGGGGGGSHHHHHHHHHHHHHHHHHHHTTT--
T ss_pred CHHHHHHHHHHHHHHHhcHHHH--HHHHHHHHHH-HChhHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHHHHHcC--
Confidence 8999999999988874321111 1122234444 2221110000 1233566788888888888888875
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 297 QELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 297 ~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
|++.+...+.+|... =..++..|+.|.....-+..+|+ ..+++.-|.++..-
T Consensus 87 -d~~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~ll~~l~---~~lg~~~t~e~~~A 138 (150)
T 1sct_A 87 -DPSRLKCVVEKFAVN-------HINRKISGDAFGAIVEPMKETLK---ARMGNYYSDDVAGA 138 (150)
T ss_dssp -CHHHHHHHHHHHHHH-------HHHTTCCHHHHGGGHHHHHHHHH---HHHGGGCCHHHHHH
T ss_pred -CHHHHHHHHHHHHHH-------HhhcCCCHHHHHHHHHHHHHHHH---HHhcccCCHHHHHH
Confidence 555566555544422 22367888888888777766654 45666666665543
No 51
>3gm3_A Protein tyrosine kinase 2 beta; four-helix bundle, transferase; 2.60A {Homo sapiens} SCOP: a.24.14.0 PDB: 3gm1_A 3gm2_A 3u3f_A 3u3c_A 2lk4_A
Probab=27.78 E-value=2e+02 Score=24.45 Aligned_cols=55 Identities=15% Similarity=0.112 Sum_probs=42.4
Q ss_pred chhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 017703 267 KFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVES 322 (367)
Q Consensus 267 ~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~ 322 (367)
+.+...-.+-..++.+-..||++... ||+....+|+-+=.-|++.+..++..++.
T Consensus 49 ~Y~~lVK~VGl~LR~Ll~sVd~~~~~-lp~s~~~EIema~k~L~kDM~eLIs~MkL 103 (153)
T 3gm3_A 49 GYVVVVKNVGLTLRKLIGSVDDLLPS-LPSSSRTEIEGTQKLLNKDLAELINKMRL 103 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGG-SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666777777788887755 78888999999888899888888887764
No 52
>2r80_A Hemoglobin subunit alpha-A; oxygen tranport/storage, heme, iron, metal-binding, oxygen transport, transport, oxygen binding; HET: HEM; 1.44A {Columba livia} PDB: 3mju_A* 3dhr_A* 3mjp_A* 1faw_A* 3eok_A* 3k8b_A* 2qmb_A* 3fs4_A* 3a59_A* 1a4f_A* 1hv4_A* 2zfb_A* 1c40_A* 3at5_A* 3at6_A*
Probab=27.18 E-value=2.4e+02 Score=22.58 Aligned_cols=115 Identities=9% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhccCCCCCC-----chhhHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDML-VVIKELIRTITGLLKHENPDDGG-----KFVDTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~-~~lK~lir~i~~~lk~~~~~~~~-----~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+..++...+.++.-. .+-. ....++|+ ..|.... +....=.++..+...+...++..+..|-
T Consensus 2 lt~~~~~~V~~sw~~v~~~~~~~g~---~~~~rlF~-~~P~~k~~F~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld--- 74 (141)
T 2r80_A 2 LSANDKSNVKAVFAKIGGQAGDLGG---EALERLFI-TYPQTKTYFPHFDLSHGSAQIKGHGKKVAEALVEAANHID--- 74 (141)
T ss_dssp CCHHHHHHHHHHHHHHTTTHHHHHH---HHHHHHHH-HSGGGGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCHHHHHHHHHHHHHHHhcHHHHHH---HHHHHHHH-HCchHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHhhh---
Confidence 79999999999998873221 1111 12233443 2221000 0001112455667777777777776542
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVES-FNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEA 358 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (367)
| +. ..+.++...=.. ++..|+.|.....-+-.+|+ ..++..-|.++..
T Consensus 75 ~---l~-------~~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~ 123 (141)
T 2r80_A 75 D---IA-------GALSKLSDLHAQKLRVDPVNFKLLGHCFLVVVA---VHFPSLLTPEVHA 123 (141)
T ss_dssp C---HH-------HHTHHHHHHHHTTSCCCTHHHHHHHHHHHHHHH---HHCTTTCCHHHHH
T ss_pred h---HH-------HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH---HHccccCCHHHHH
Confidence 1 22 233332222223 67788888887777766554 4666656666554
No 53
>2zs0_C Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_C* 2d2m_C* 2zfo_C* 2zs1_C*
Probab=27.07 E-value=2.5e+02 Score=22.63 Aligned_cols=106 Identities=11% Similarity=0.108 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhhhccCCCCCCch--hh----HHHHHHHHHhhhhhhhHHhH
Q 017703 223 DLSSEEMKVAQLAIGIVSDM------LVVIKELIRTITGLLKHENPDDGGKF--VD----TLERLLKLCQGIGVQIDELG 290 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~------~~~lK~lir~i~~~lk~~~~~~~~~~--v~----~LD~L~~~~~~i~~~VDeL~ 290 (367)
.+|++|+..++...+.++.- ..+-. ....++|+ ..|.....+ .. .=.++..+...|...++.++
T Consensus 3 ~~s~~~~~~v~~sw~~v~~~~~~~~~~~~g~---~~~~rlF~-~~P~~k~~F~~~~~~~~~~~~~~~h~~~v~~~l~~~v 78 (147)
T 2zs0_C 3 CCSSEDRANVMHNWDAAWSAAYSDRRVALAQ---AVFASLFS-RDAAAQGLFSGVSADNPDSADFRAHCVRVVNGLDVAI 78 (147)
T ss_dssp CCCHHHHHHHHHHHHHHCCSSCSHHHHHHHH---HHHHHHHH-HCGGGGGGGGGGTTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHccccchHHHHHHH---HHHHHHHH-HCHHHHHhccccCccCCCCHHHHHHHHHHHHHHHHHH
Confidence 46999999999999887321 11111 12233333 222111000 00 01246777788888888888
Q ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcHHHHHHHHHHHHHHH
Q 017703 291 ASLYPPQELSVIKAGSVKILSMTDELQKEVESF-NSSSEAFIQACNGLRSSLK 342 (367)
Q Consensus 291 sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~-~~~~~~~~~~~~~~~~~~~ 342 (367)
..|- |++.+...+.+|... =... +..|+.|.....-+..+|+
T Consensus 79 ~~ld---d~~~l~~~l~~L~~~-------H~~~~gV~p~~f~~~~~~Ll~~l~ 121 (147)
T 2zs0_C 79 NMLN---DPAVLNEQLAHLSAQ-------HQARAGVAAAHFDVMAEAFAEVMP 121 (147)
T ss_dssp HTTT---CHHHHHHHHHHHHHH-------HHTSTTCCHHHHHHHHHHHHHHGG
T ss_pred HHcC---CHHHHHHHHHHHHHH-------hccccCCCHHHHHHHHHHHHHHHH
Confidence 8775 555555555544332 1223 6677777776666655543
No 54
>1o3x_A ADP-ribosylation factor binding protein GGA1; protein transport; 2.10A {Homo sapiens} SCOP: a.7.8.1 PDB: 1nwm_X 1x79_A
Probab=27.03 E-value=2.7e+02 Score=23.04 Aligned_cols=70 Identities=9% Similarity=0.132 Sum_probs=48.3
Q ss_pred HHHHhhhhccCCCCCC-c-hhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017703 251 RTITGLLKHENPDDGG-K-FVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESF 323 (367)
Q Consensus 251 r~i~~~lk~~~~~~~~-~-~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~ 323 (367)
+++..+|....|.... . ..+.+..|+..|+...|.|=.++... .+.+++...+-.++..+..++.--+.+
T Consensus 61 ~LL~EML~~~~p~~~~~~~d~Ell~eL~~~ck~~qp~i~~li~e~---~ddee~l~elL~~ND~ln~vl~kY~~~ 132 (140)
T 1o3x_A 61 KLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDT---EDNDEALAEILQANDNLTQVINLYKQL 132 (140)
T ss_dssp HHHHHHHHHTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC---TTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3555666544443322 2 46899999999999999999999874 244556666666777777776655444
No 55
>1jeb_A Hemoglobin zeta chain; oxygen transport, oxygen storage/transport complex; HET: HEM; 2.10A {Homo sapiens} SCOP: a.1.1.2
Probab=27.01 E-value=2.4e+02 Score=22.47 Aligned_cols=117 Identities=14% Similarity=0.076 Sum_probs=64.1
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCCCchh-----hHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPDDGGKFV-----DTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~~~~~~v-----~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+.+++...+.++.- ..+-. ....++|. ..|....-+. ..=.++..+...+...++.++..+=
T Consensus 3 lt~~~~~~v~~sw~~v~~~~~~~g~---~~y~rlF~-~~P~~k~~F~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ld--- 75 (142)
T 1jeb_A 3 LTKTERTIIVSMWAKISTQADTIGT---ETLERLFL-SHPQTKTYFPHFDLHPGSAQLRAHGSKVVAAVGDAVKSID--- 75 (142)
T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHH---HHHHHHHH-HCGGGGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHHH-HCccHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHhHh---
Confidence 7999999999998887321 11111 12233343 2221100000 0113466777777777777777653
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +...+.+|.. ....+++..|+.|.....-+..+|+. .++..-|.++..-
T Consensus 76 ~---l~~~l~~L~~------~H~~k~~V~p~~f~~~~~~ll~~l~~---~lg~~~t~e~~~A 125 (142)
T 1jeb_A 76 D---IGGALSKLSE------LHAYILRVDPVNFKLLSHCLLVTLAA---RFPADFTAEAHAA 125 (142)
T ss_dssp C---HHHHTHHHHH------HHHHTSCCCTHHHHHHHHHHHHHHHH---HCTTTCCHHHHHH
T ss_pred h---HHHHHHHHHH------hhhhccCCCHHHHHHHHHHHHHHHHH---HccccCCHHHHHH
Confidence 2 2333333322 12234788888888888877666644 5666666665543
No 56
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=26.81 E-value=2.9e+02 Score=23.39 Aligned_cols=69 Identities=9% Similarity=0.120 Sum_probs=45.9
Q ss_pred HHHhhhhccCCCCC-Cc-hhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017703 252 TITGLLKHENPDDG-GK-FVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVESF 323 (367)
Q Consensus 252 ~i~~~lk~~~~~~~-~~-~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~ 323 (367)
++..+|..-.|... .. ..+.+..|+..|+...|.|=.|+... .+.+++...+-.++..+..++..-+.+
T Consensus 71 LL~EML~~~~pg~~~~~~d~Ell~eL~~~Ck~~qp~i~~Li~e~---~ddee~L~elL~~ND~Ln~vl~kY~~~ 141 (158)
T 1naf_A 71 LLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLASDT---EDNDEALAEILQANDNLTQVINLYKQL 141 (158)
T ss_dssp HHHHHHHHTTTC-----CCTTHHHHHHHHHHTHHHHHHHHHHHC---CSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 44455554334321 12 45899999999999999999999875 354556666666777777776665554
No 57
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=26.20 E-value=2.5e+02 Score=22.38 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=68.2
Q ss_pred CCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhhccCCCCCCchh---hHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSD---MLVVIKELIRTITGLLKHENPDDGGKFV---DTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~---~~~~lK~lir~i~~~lk~~~~~~~~~~v---~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+.+++...+.++. ...+-. ....++|. ..|.....+. ..=..+..+...+...++..+..+-
T Consensus 2 lt~~~~~~v~~sw~~v~~~~~~~~~g~---~~y~rlf~-~~P~~~~~F~~~~~~~~~~~~h~~~v~~~l~~~v~~ld--- 74 (147)
T 1jf3_A 2 LSAAQRQVVASTWKDIAGADNGAGVGK---ECLSKFIS-AHPEMAAVFGFSGASDPGVAELGAKVLAQIGVAVSHLG--- 74 (147)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTTHHHHH---HHHHHHHH-HCGGGTTTTTCSSTTCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCHHHHHHHHHHHHHHHhcccHHHHHH---HHHHHHHH-hChhHHHHcCcCCCCCHHHHHHHHHHHHHHHHHHHhCC---
Confidence 799999999999988863 222222 23334443 2221110000 0003677778888888888887764
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhc---CCcHHHHHHHHHHHHHHHHHHhhhccccchhHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVESFN---SSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEA 358 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (367)
+++.+...+.+|.. .=..++ ..|+.|.....-+..+|+. .+++.-|.++..
T Consensus 75 ~~~~l~~~l~~L~~-------~H~~~g~l~V~p~~f~~~~~~Ll~~l~~---~lg~~~t~e~~~ 128 (147)
T 1jf3_A 75 DEGKMVAEMKAVGV-------RHKGYGNKHIKAEYFEPLGASLLSAMEH---RIGGKMNAAAKD 128 (147)
T ss_dssp SHHHHHHHHHHHHH-------HGGGSTTSCCCGGGHHHHHHHHHHHHHH---HHGGGSCHHHHH
T ss_pred CHHHHHHHHHHHHH-------HHHhccCCCcCHHHHHHHHHHHHHHHHH---HhcccCCHHHHH
Confidence 55555544443332 222333 8889998888887776654 555555555544
No 58
>1spg_A Hemoglobin; carbon monoxide, R-state, teleost FISH effect, oxygen transport; HET: HEM; 1.95A {Leiostomus xanthurus} SCOP: a.1.1.2
Probab=25.93 E-value=2.6e+02 Score=22.52 Aligned_cols=118 Identities=8% Similarity=-0.013 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC-------chhhHHHHHHHHHhhhhhhhHHhHhccCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG-------KFVDTLERLLKLCQGIGVQIDELGASLYPP 296 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~-------~~v~~LD~L~~~~~~i~~~VDeL~sslYpp 296 (367)
||++|+..++...+.++.-..-+ ......++|+. .|.... +.-..=.++..+...+...+++.+..|-
T Consensus 3 lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~~-~P~~k~~F~~~~~~~~~~~~~~~~h~~~v~~al~~~v~~ld-- 77 (144)
T 1spg_A 3 LSATDKARVKALWDKIEGKSAEL--GAEALGRMLVS-FPQTKIYFSEWGQDLGPQTPQVRNHGAVIMAAVGKAVKSID-- 77 (144)
T ss_dssp CCHHHHHHHHHHHHHHSSTHHHH--HHHHHHHHHHH-CGGGGGGGTTSCSCSSTTSHHHHHHHHHHHHHHHHHHHTTT--
T ss_pred CCHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHH-ChHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHhHH--
Confidence 79999999999998873211111 01122333431 121000 0001113456677777777777776653
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHHh
Q 017703 297 QELSVIKAGSVKILSMTDELQKEVES-FNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAKL 360 (367)
Q Consensus 297 ~d~~~v~~~~~~L~~~l~k~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (367)
| +.. .+.++...=.. ++..|+.|.....-+-.+|+ ..|+..-|.++..-.
T Consensus 78 -~---l~~-------~l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~AW 128 (144)
T 1spg_A 78 -N---LVG-------GLSQLSELHAFKLRVDPANFKILAHNIILVIS---MYFPGDFTPEVHLSV 128 (144)
T ss_dssp -C---HHH-------HHHHHHHHHHTTSCCCTHHHHHHHHHHHHHHH---HHSTTTCCHHHHHHH
T ss_pred -h---HHH-------HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHcccCCCHHHHHHH
Confidence 1 333 33333222223 67888888887777766654 466666666665443
No 59
>2gs4_A Protein YCIF; stress proteins, rubrerythrin, metal binding protein; 2.00A {Escherichia coli} SCOP: a.25.1.4
Probab=25.60 E-value=1.7e+02 Score=24.96 Aligned_cols=65 Identities=12% Similarity=0.084 Sum_probs=44.6
Q ss_pred chhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcHHHH
Q 017703 267 KFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKILSMTDELQKEVES-FNSSSEAFI 331 (367)
Q Consensus 267 ~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~-~~~~~~~~~ 331 (367)
.++.+|-+++..-+++......++...-.|.=-..+..++..-...+..+-.+++. ++..|...+
T Consensus 9 lf~~~L~D~y~aE~q~~~al~~~~~~a~~p~Lk~~l~~h~~eT~~qi~rLe~i~~~~lg~~~~~~~ 74 (166)
T 2gs4_A 9 VFIHLLSDTYSAEKQLTRALAKLARATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRMK 74 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 46778888888888888888888887764443445666666666667776666677 665555444
No 60
>1x9f_B Erythrocruorin, globin II, extracellular, globin AIII, globin B; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_B*
Probab=23.82 E-value=2.8e+02 Score=22.17 Aligned_cols=107 Identities=9% Similarity=-0.005 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhhhccCCCCCCch--hhH----HHHHHHHHhhhhhhhHHhHhc
Q 017703 223 DLSSEEMKVAQLAIGIVSDM----LVVIKELIRTITGLLKHENPDDGGKF--VDT----LERLLKLCQGIGVQIDELGAS 292 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~----~~~lK~lir~i~~~lk~~~~~~~~~~--v~~----LD~L~~~~~~i~~~VDeL~ss 292 (367)
.+|++|+.+++...+.++.- ..+-. ....++|. ..|.....+ ... =.++..+...+...++.++..
T Consensus 3 ~~s~~~~~~V~~sw~~v~~~~~~~~~~g~---~~y~rlF~-~~P~~k~~F~~~~~~~~~s~~~~~h~~~v~~~l~~~v~~ 78 (145)
T 1x9f_B 3 QCGVLEGLKVKSEWGRAYGSGHDREAFSQ---AIWRATFA-QVPESRSLFKRVHGDDTSHPAFIAHADRVLGGLDIAIST 78 (145)
T ss_dssp CCCHHHHHHHHHHHHHHHCCHHHHHHHHH---HHHHHHHH-HCGGGGGGGGGGTTTCTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHcccccHHHHHH---HHHHHHHH-hChHHHHHhHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36999999999999888522 11111 12234443 222111011 111 125677888888888888887
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Q 017703 293 LYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQ 343 (367)
Q Consensus 293 lYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (367)
|- |++.+...+.+|... =...+..|+.|.....-|...|+.
T Consensus 79 ld---d~~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~Ll~~l~~ 119 (145)
T 1x9f_B 79 LD---QPATLKEELDHLQVQ-------HEGRKIPDNYFDAFKTAILHVVAA 119 (145)
T ss_dssp TT---CHHHHHHHHHHHHHH-------HTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHHHHH-------HhhcCCCHHHHHHHHHHHHHHHHH
Confidence 75 555555554444321 123356677777666666555543
No 61
>1wmu_A Hemoglobin D alpha chain; hemoglobin D, reptilia, the aldabra giant tortoise, geochelone gigantea, oxygen storage/transport complex; HET: HEM; 1.65A {Dipsochelys dussumieri} SCOP: a.1.1.2 PDB: 1v75_A* 2z6n_A* 1hbr_A*
Probab=23.58 E-value=2.8e+02 Score=22.06 Aligned_cols=117 Identities=8% Similarity=0.050 Sum_probs=63.6
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCCC-----chhhHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPDDGG-----KFVDTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~~~~-----~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+.+++...+.++.- ..+-. ....++|.. .|.... +.-..=.++..+...+...++.++..+-
T Consensus 2 lt~~~~~~v~~sw~~v~~~~~~~g~---~~~~rlF~~-~P~~k~~F~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld--- 74 (141)
T 1wmu_A 2 LTEDDKQLIQHVWEKVLEHQEDFGA---EALERMFIV-YPSTKTYFPHFDLHHDSEQIRHHGKKVVGALGDAVKHID--- 74 (141)
T ss_dssp CCHHHHHHHHHHHHHHGGGHHHHHH---HHHHHHHHH-SGGGGGGCTTSCCSTTCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred cCHHHHHHHHHHHHHHHccHHHHHH---HHHHHHHHH-CccHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhHh---
Confidence 7999999999998887422 21211 122344432 221100 0001112456677777777777776653
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +...+.+|.. ....+++..|+.|.....-+...|+ ..++..-|.++..-
T Consensus 75 ~---l~~~l~~L~~------~H~~~~~V~p~~f~~~~~~ll~~l~---~~lg~~~t~e~~~A 124 (141)
T 1wmu_A 75 N---LSATLSELSN------LHAYNLRVDPVNFKLLSHCFQVVLG---AHLGREYTPQVQVA 124 (141)
T ss_dssp S---HHHHTHHHHH------HHHHTSCCCHHHHHHHHHHHHHHHH---HHHGGGCCHHHHHH
T ss_pred h---HHHHHHHHHH------HHHHHhCCCHHHHHHHHHHHHHHHH---HHccccCCHHHHHH
Confidence 1 3333333322 1222377888888888877766654 45666666665543
No 62
>1x3k_A Hemoglobin component V; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.64A {Tokunagayusurika akamusi} PDB: 2zwj_A* 3a5a_A* 3a5b_A* 3a5g_A* 3a9m_A* 3arj_A* 3ark_A* 3arl_A*
Probab=23.57 E-value=2.1e+02 Score=23.25 Aligned_cols=82 Identities=15% Similarity=0.030 Sum_probs=46.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC----------chhhHHHHHHHHHhhhhhhhHHhHhc
Q 017703 223 DLSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG----------KFVDTLERLLKLCQGIGVQIDELGAS 292 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~----------~~v~~LD~L~~~~~~i~~~VDeL~ss 292 (367)
.||++|+.+++...+.++.-..-+ ......++|+. .|.... +.+..=.++..+...|...+++++..
T Consensus 4 ~Lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~~-~P~~k~~F~~f~~~~~~~l~~~~~~~ah~~~v~~~l~~~v~~ 80 (152)
T 1x3k_A 4 GLSDSEEKLVRDAWAPIHGDLQGT--ANTVFYNYLKK-YPSNQDKFETLKGHPLDEVKDTANFKLIAGRIFTIFDNCVKN 80 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHH--HHHHHHHHHHH-SGGGGGGSTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhcHHhH--HHHHHHHHHHH-ChhHHHHhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999998874322211 11233344442 221100 01111236777888888888888888
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 017703 293 LYPPQELSVIKAGSVKIL 310 (367)
Q Consensus 293 lYpp~d~~~v~~~~~~L~ 310 (367)
|- |++.+...+.+|.
T Consensus 81 ld---d~~~l~~~l~~L~ 95 (152)
T 1x3k_A 81 VG---NDKGFQKVIADMS 95 (152)
T ss_dssp TT---CHHHHHHHHHHHH
T ss_pred CC---CHHHHHHHHHHHH
Confidence 75 5555555544443
No 63
>1cg5_A Protein (hemoglobin); oxygen transport; HET: HEM; 1.60A {Dasyatis akajei} SCOP: a.1.1.2 PDB: 1cg8_A*
Probab=23.09 E-value=2.9e+02 Score=22.08 Aligned_cols=117 Identities=13% Similarity=0.076 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC------chhhHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG------KFVDTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~------~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+.+++...+.++.-..-+ ......++|+. .|.... +....=.++..+...+...+++++..|-
T Consensus 2 lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~~-~P~~k~~F~~f~~~~~~n~~~~~h~~~v~~al~~~v~~ld--- 75 (141)
T 1cg5_A 2 LSSQNKKAIEELGNLIKANAEAW--GADALARLFEL-HPQTKTYFSKFSGFEACNEQVKKHGKRVMNALADATHHLD--- 75 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHTHHHH--HHHHHHHHHHH-CGGGGGGGTTCSCCSTTSHHHHHHHHHHHHHHHHHTTCTT---
T ss_pred cCHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHH-CchHHHHhHHhCCCCCCCHhHHHHHHHHHHHHHHHHHhHH---
Confidence 79999999999998885422111 11222344432 221000 0000112455666777777777766542
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +...+.+|.. ....+++..|+.|.....-+-.+|+ ..++ .-|.++..-
T Consensus 76 ~---l~~~l~~L~~------~H~~~~~V~p~~f~~~~~~ll~~l~---~~lg-~~t~e~~~A 124 (141)
T 1cg5_A 76 N---LHLHLEDLAR------KHGENLLVDPHNFHLFADCIVVTLA---VNLQ-AFTPVTHCA 124 (141)
T ss_dssp S---HHHHHHHHHH------HHHHTTCCCTHHHHHHHHHHHHHHH---HHSS-CCCHHHHHH
T ss_pred h---HHHHHHHHHH------HHHHHcCCCHHHHHHHHHHHHHHHH---HHcc-cCCHHHHHH
Confidence 1 3333333322 1122378888888888777766654 4566 566665543
No 64
>1out_A Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_A*
Probab=22.42 E-value=3e+02 Score=22.06 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=61.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC------chhhHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGG------KFVDTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~------~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+..++...+.++.-..-+ ......++|+. .|.... +.-..=-++..+...+...+++.+..|-
T Consensus 3 lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~~-~P~~k~~F~~f~~~~~~~~~~~~h~~~v~~al~~~v~~ld--- 76 (143)
T 1out_A 3 LTAKDKSVVKAFWGKISGKADVV--GAEALGRMLTA-YPQTKTYFSHWADLSPGSGPVKKHGGIIMGAIGKAVGLMD--- 76 (143)
T ss_dssp CCHHHHHHHHHHHHHHGGGHHHH--HHHHHHHHHHH-SGGGGGGGTTSSCCSTTCHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHH-CccHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhHH---
Confidence 79999999999998874321111 11122344432 221000 0101112456667777777777776653
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVE-SFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +... +.++...=. .++..|+.|.....-+-.+|+ ..|+..-|.++..-
T Consensus 77 ~---l~~~-------l~~L~~~H~~~~~V~p~~f~~~~~~Ll~~l~---~~lg~~~t~e~~~A 126 (143)
T 1out_A 77 D---LVGG-------MSALSDLHAFKLRVDPGNFKILSHNILVTLA---IHFPSDFTPEVHIA 126 (143)
T ss_dssp C---HHHH-------THHHHHHHHHTTCCCTHHHHHHHHHHHHHHH---HHCTTTCCHHHHHH
T ss_pred h---HHHH-------HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH---HHccccCCHHHHHH
Confidence 1 3333 333222212 367788888877777665554 45666666665543
No 65
>2huj_A LIN2004 protein; hypothetical protein, structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 1.74A {Listeria innocua} SCOP: a.24.26.1
Probab=21.92 E-value=3.5e+02 Score=22.53 Aligned_cols=78 Identities=9% Similarity=-0.081 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHH
Q 017703 230 KVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKI 309 (367)
Q Consensus 230 ~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L 309 (367)
.-++.+-.++..|...-. .-++..+|+- =...+++.+.++.+.++ +-|.||-...--+.+.....
T Consensus 58 Pf~d~vd~~l~eW~~~a~-------~~I~~~rPkY--m~~~Qie~~~eNie~ls------Vq~f~~~TskKrF~e~~kSV 122 (140)
T 2huj_A 58 PFVDEAKRCADDFLELAI-------PWVNTERPPY--LGELQLRQACDNVQMTA------VSAFNGRSFYKHFLDHYQST 122 (140)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHCCTT--CCHHHHHHHHHHHHHHH------HHTTCTTSCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH-------HHHHhcCCCC--CCHHHHHHHHHHHHHHH------HHHhCCCcchhHHHHHHHHH
Confidence 344444445555544443 3333345543 35778888888888874 56889888877778888877
Q ss_pred HHHHHHHHHHHHh
Q 017703 310 LSMTDELQKEVES 322 (367)
Q Consensus 310 ~~~l~k~~~~i~~ 322 (367)
.=+|..++..|..
T Consensus 123 ~YtL~~i~~~i~~ 135 (140)
T 2huj_A 123 KYTLTRVRDFLKR 135 (140)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776643
No 66
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=21.64 E-value=3.6e+02 Score=24.08 Aligned_cols=78 Identities=8% Similarity=0.082 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHhhhhhhhhcccCCCCCHHHHHH-------HHHHHHHHHHHHHHhccCCCCCCChhHHHHHHHHHHHH
Q 017703 41 SWNDVIQMGEQVSKKATVVGMLWTGETPEAKAIEE-------NMAEYFNMLQGFILLSHGSTVGAGPTLSLSIHASVKQV 113 (367)
Q Consensus 41 ~~~~l~~~a~~l~~~aTKlsll~~~~Pps~~~~~~-------~~~~l~~~l~~~~~l~~~~~~g~g~tl~~~i~~~~~~v 113 (367)
+-.++...++.|..-.--|.-...+.| +.+.. .++.+.++..+..+..+.+ .=...+-..+|.|
T Consensus 67 ~qeq~~~~~~eL~~~i~~l~~AAk~~~---e~LG~av~~~a~~~epLv~aa~gaAS~t~ds------~~Q~~lLdq~Ktv 137 (216)
T 4f7g_B 67 LHTQMLTAVQEISHLIEPLASAARAEA---SQLGHKVSQMAQYFEPLTLAAVGAASKTLSH------PQQMALLDQTKTL 137 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCH---HHHHHHHHHHHHTHHHHHHHHHHHHHHCSSH------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhcCH---HHHhHHHHHHHHHhHHHHHHHHHHHHcCCCh------HHHHHHHHHHHHH
Confidence 344566666666666666655554444 55443 3333344444554443331 1144577788888
Q ss_pred HHHHHHHHHHHHHh
Q 017703 114 VDSSFKLMMESITL 127 (367)
Q Consensus 114 v~~~~~L~~~l~~~ 127 (367)
.++..+|+..-...
T Consensus 138 ~es~lqlv~AaK~a 151 (216)
T 4f7g_B 138 AESALQLLYTAKEA 151 (216)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 88888888666543
No 67
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=21.46 E-value=3.2e+02 Score=21.98 Aligned_cols=104 Identities=17% Similarity=0.081 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHhhhhccCCC--------C-CCchhhHHHHHHHHHhhhhhhhHHh
Q 017703 224 LSSEEMKVAQLAIGIVS-----DMLVVIKELIRTITGLLKHENPD--------D-GGKFVDTLERLLKLCQGIGVQIDEL 289 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk-----~~~~~lK~lir~i~~~lk~~~~~--------~-~~~~v~~LD~L~~~~~~i~~~VDeL 289 (367)
||++|+.+++...+.++ ....++ .++|+ ..|. . ..+.+..=.++..+...|...++++
T Consensus 1 Lt~~~~~~V~~sw~~v~~~~~~~g~~~~-------~rlF~-~~P~~k~~F~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~ 72 (153)
T 2bk9_A 1 MNSDEVQLIKKTWEIPVATPTDSGAAIL-------TQFFN-RFPSNLEKFPFRDVPLEELSGNARFRAHAGRIIRVFDES 72 (153)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHH-------HHHHH-HCGGGGGGSTTTTSCGGGGGGCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCccchHHHHH-------HHHHH-hChhHHhcCcCCCCCHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 68999999999998885 223333 23333 2221 0 0011122345777888888888888
Q ss_pred HhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Q 017703 290 GASLYPPQELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLK 342 (367)
Q Consensus 290 ~sslYpp~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~ 342 (367)
+..|--+.|++.+...+.+|... =.+.+..|+.|.....-+..+|+
T Consensus 73 v~~l~~~dd~~~l~~~l~~L~~~-------H~~~gV~p~~f~~~~~~Ll~~l~ 118 (153)
T 2bk9_A 73 IQVLGQDGDLEKLDEIWTKIAVS-------HIPRTVSKESYNQLKGVILDVLT 118 (153)
T ss_dssp HHHTTSTTHHHHHHHHHHHHHHH-------HGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHHccccCCHHHHHHHHHHHHHH-------HhccCCCHHHHHHHHHHHHHHHH
Confidence 88774333555555554444322 12234555555555555554443
No 68
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=21.24 E-value=3.3e+02 Score=22.02 Aligned_cols=18 Identities=11% Similarity=0.211 Sum_probs=15.9
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVS 240 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk 240 (367)
.||++|+.+++...+.++
T Consensus 8 ~Ls~~~~~~I~~sw~~v~ 25 (154)
T 4b4y_A 8 QVSEEQQSLIMEDVQVLL 25 (154)
T ss_dssp CCCHHHHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 489999999999998874
No 69
>3d1k_A Hemoglobin subunit alpha-1; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 2aa1_A* 1t1n_A* 1la6_A* 3nfe_A* 3ng6_A* 2h8f_A* 1pbx_A* 1s5x_A* 1s5y_A* 1hbh_A* 2h8d_A* 2peg_A* 3gkv_A* 3gqg_A* 1v4x_A* 1v4u_A* 1v4w_A*
Probab=20.95 E-value=3.2e+02 Score=21.76 Aligned_cols=117 Identities=7% Similarity=0.029 Sum_probs=64.0
Q ss_pred CCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCCC------chhhHHHHHHHHHhhhhhhhHHhHhccCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDM-LVVIKELIRTITGLLKHENPDDGG------KFVDTLERLLKLCQGIGVQIDELGASLYPP 296 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~-~~~lK~lir~i~~~lk~~~~~~~~------~~v~~LD~L~~~~~~i~~~VDeL~sslYpp 296 (367)
||++|+.+++...+.++.- ..+-. ....++|.. .|.... +.-..=.++..+...+...++.++..|-
T Consensus 2 ls~~~~~~v~~sw~~v~~~~~~~g~---~~~~rlF~~-~P~~~~~F~~~~~~~~~s~~~~~h~~~v~~al~~~v~~ld-- 75 (142)
T 3d1k_A 2 LSDKDKAAVRALWSKIGKSSDAIGN---DALSRMIVV-YPQTKIYFSHWPDVTPGSPNIKAHGKKVMGGIALAVSKID-- 75 (142)
T ss_dssp CCHHHHHHHHHHHHHHGGGHHHHHH---HHHHHHHHH-SGGGGGGGTTSSCCSTTCHHHHHHHHHHHHHHHHHHHTTT--
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHH---HHHHHHHHH-CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhHH--
Confidence 7999999999999887422 21111 122333431 121000 0001113455677777777777777653
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 297 QELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 297 ~d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +...+.+|.. ....+++..|+.|.....-+...|+ ..++..-|.++..-
T Consensus 76 -~---l~~~l~~L~~------~H~~~~~V~p~~f~~~~~~ll~~l~---~~lg~~~t~e~~~A 125 (142)
T 3d1k_A 76 -D---LKTGLMELSE------QHAYKLRVDPSNFKILNHCILVVIS---TMFPKEFTPEAHVS 125 (142)
T ss_dssp -C---HHHHHHHHHH------HHHHTSCCCGGGHHHHHHHHHHHHH---HHCTTTCCHHHHHH
T ss_pred -H---HHHHHHHHHH------HHHHhcCCChHHHHHHHHHHHHHHH---HHccccCCHHHHHH
Confidence 2 3333333322 1122378888888888877766654 46666666666543
No 70
>2hfi_A Hypothetical protein YPPE; YPPE_bacsu, GFT structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus subtilis} SCOP: a.24.26.1 PDB: 2im8_A
Probab=20.78 E-value=3.5e+02 Score=22.18 Aligned_cols=79 Identities=10% Similarity=-0.011 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchhhHHHHHHHHHhhhhhhhHHhHhccCCCCCHHHHHHHHHHH
Q 017703 230 KVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFVDTLERLLKLCQGIGVQIDELGASLYPPQELSVIKAGSVKI 309 (367)
Q Consensus 230 ~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v~~LD~L~~~~~~i~~~VDeL~sslYpp~d~~~v~~~~~~L 309 (367)
.-++.+-.++..|...-. .-++..+|+- =...+++.+.++.+.++ +-|.||-...--+.+.....
T Consensus 42 Pf~d~vd~~l~~w~~~a~-------~~I~~~rpkY--~~~~Qie~~~eNie~ls------Vq~f~~~TskKrF~e~~kSV 106 (131)
T 2hfi_A 42 PAVEENDELAARWAEGAL-------ELIKVRRPKY--VHKEQIEAVKDNFLELV------LQSYVHHIHKKRFKDITESV 106 (131)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHSCCSS--SCHHHHHHHHHHHHHHH------HHHHHCCCCSHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH-------HHHHhcCCCC--CCHHHHHHHHHHHHHHH------HHHhCCCcchhHHHHHHHHH
Confidence 344444445555544443 3344455654 35778888888888874 55788888877788888878
Q ss_pred HHHHHHHHHHHHhh
Q 017703 310 LSMTDELQKEVESF 323 (367)
Q Consensus 310 ~~~l~k~~~~i~~~ 323 (367)
.=+|..++..|..-
T Consensus 107 ~Y~L~~i~~~i~~~ 120 (131)
T 2hfi_A 107 LYTLHAVKDEIARE 120 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888877777643
No 71
>3mkb_A Hemoglobin subunit alpha; oxygen affinity, shortfin MAK storage, oxygen transport; HET: HEM; 1.90A {Isurus oxyrinchus} SCOP: a.1.1.2 PDB: 1gcv_A* 1gcw_A*
Probab=20.43 E-value=3.4e+02 Score=21.88 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=16.2
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 017703 223 DLSSEEMKVAQLAIGIVSD 241 (367)
Q Consensus 223 ~~seee~~~~~~~~~lvk~ 241 (367)
.||++|+..++...+.++.
T Consensus 1 ~Ls~~~~~~V~~~w~~v~~ 19 (140)
T 3mkb_A 1 AFTGVERSTIGAIAKILAS 19 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 3799999999999988844
No 72
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=20.08 E-value=3.4e+02 Score=21.69 Aligned_cols=118 Identities=16% Similarity=0.103 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCchh------hHHHHHHHHHhhhhhhhHHhHhccCCCC
Q 017703 224 LSSEEMKVAQLAIGIVSDMLVVIKELIRTITGLLKHENPDDGGKFV------DTLERLLKLCQGIGVQIDELGASLYPPQ 297 (367)
Q Consensus 224 ~seee~~~~~~~~~lvk~~~~~lK~lir~i~~~lk~~~~~~~~~~v------~~LD~L~~~~~~i~~~VDeL~sslYpp~ 297 (367)
||++|+.+++...+.++.-..-+ ......++|+. .|.....+. ..=.++-.+...+...+++++..|-
T Consensus 3 lt~~~~~~V~~sw~~v~~~~~~~--g~~~~~rlF~~-~P~~k~~F~~~~d~~~~n~~~~~h~~~v~~al~~~v~~ld--- 76 (143)
T 1xq5_A 3 LSSKDKDTVKALWGKIADKAEEI--GSDALSRMLAV-YPQTKTYFSHWKDLSPGSAPVNKHGKTIMGGIVDAVASID--- 76 (143)
T ss_dssp CCHHHHHHHHHHHHHTGGGHHHH--HHHHHHHHHHH-CGGGGGGGTTCSCCSTTSHHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCHHHHHHHHHHHHHHHhcHHHH--HHHHHHHHHHH-ChHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHhHh---
Confidence 79999999999988873221111 01122334432 221000000 0112455666666666676666542
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHhhhccccchhHHHH
Q 017703 298 ELSVIKAGSVKILSMTDELQKEVESFNSSSEAFIQACNGLRSSLKQMDSEVDCFNTTDLEAK 359 (367)
Q Consensus 298 d~~~v~~~~~~L~~~l~k~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (367)
| +...+.+|.. ....+++..|+.|.....-+-..|+ ..++..-|.++..-
T Consensus 77 ~---l~~~l~~L~~------~H~~~~~V~p~~f~~~~~~ll~~l~---~~lg~~~t~e~~~A 126 (143)
T 1xq5_A 77 D---LNAGLLALSE------LHAFTLRVDPANFKILSHCILVLLA---VKFPKDFTPEVHIS 126 (143)
T ss_dssp C---HHHHTHHHHH------HHHHTSCCCTHHHHHHHHHHHHHHH---HHCGGGCCHHHHHH
T ss_pred h---HHHHHHHHHH------HHHHhcCCCHHHHHHHHHHHHHHHH---HHhhccCCHHHHHH
Confidence 1 2222222221 1222367888888887777766554 46666666665543
Done!