BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017704
(367 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14308|SWC4_SCHPO SWR1-complex protein 4 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=swc4 PE=3 SV=2
Length = 437
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 143/245 (58%), Gaps = 16/245 (6%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTG-GLAPLMPSIDVSQLKK 60
D +D+ +P ++ Q+ K+ +R+P+GISRE+Y+L G APL +I + K+
Sbjct: 5 DIRDVFELPPPEIGNKQKSKT----PTERRPEGISRELYSLLGENSAPL--AIYQKKFKE 58
Query: 61 RPPSDEKI-TWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDE 119
+P K W PF+ S+RKD+ L+HWV + + V Y F K+N + ++ YTDE
Sbjct: 59 KPKVSHKAKNWVRQPFSISSRKDDFTLHHWV-LKSEVDSEASYKFEKFNVPLFIIDYTDE 117
Query: 120 EYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSS-----RTVEELKDRYYGVSR 174
EY+ YL D W K+ETD LF LC+ +DLRF VIADR+ + RT+E+LKDR+Y VSR
Sbjct: 118 EYQNYLKDEDWNKDETDYLFRLCKDYDLRFFVIADRYDNEKYKKHRTLEDLKDRFYSVSR 177
Query: 175 AILIARAP--SPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKR 232
IL+AR P S T L YN QEV RK+ L + S+T + ++ + E KR
Sbjct: 178 KILLARNPINSMTAAQSSLLNTMEYNKEQEVIRKKYLIGLASRTPEEVAEEEALFIELKR 237
Query: 233 ITDSR 237
I S+
Sbjct: 238 IETSQ 242
>sp|Q9JI44|DMAP1_MOUSE DNA methyltransferase 1-associated protein 1 OS=Mus musculus
GN=Dmap1 PE=1 SV=1
Length = 468
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 164/330 (49%), Gaps = 47/330 (14%)
Query: 30 RKPDGISREVYAL----TGGLAPLMPSIDVSQ----LKKRPPSDEKITWQWLPFTNSARK 81
++P+G+ REVYAL PL+PS D Q +K + S + W+W+PFTN ARK
Sbjct: 48 KRPEGMHREVYALLYSDKKDAPPLLPS-DTGQGYRTVKAKLGSKKVRPWKWMPFTNPARK 106
Query: 82 DNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFEL 141
D +HW R DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L
Sbjct: 107 DGAMFFHWRRAAE---EGKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDL 163
Query: 142 CERFDLRFIVIADRFP----SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP- 196
RFDLRF+VI DR+ R+VE+LK+RYY + + RA TD +K P
Sbjct: 164 SRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPV 217
Query: 197 YNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGS 256
++ E RK L + ++T Q ++ +L E ++I ++R R ++
Sbjct: 218 FDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKI-EARKKEREKRSQDLQKLITAAD 276
Query: 257 ESADRAVVLGDTVSPSSNIQLPSAT-----VVPSTSIIA--DSASTLASLRMLRVYLRTY 309
+A++ T + +LP VP T+ I D S +LR R+ L
Sbjct: 277 TTAEQR----RTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKL--- 329
Query: 310 ALEQMVQAASSSAGLRTIKRVEQALQELGV 339
SS G + IK +EQ L ELGV
Sbjct: 330 ---------PSSVGQKKIKALEQMLLELGV 350
>sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens
GN=DMAP1 PE=1 SV=1
Length = 467
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 163/337 (48%), Gaps = 61/337 (18%)
Query: 30 RKPDGISREVYAL----TGGLAPLMPSIDVSQ----LKKRPPSDEKITWQWLPFTNSARK 81
++P+G+ REVYAL PL+PS D Q +K + S + W+W+PFTN ARK
Sbjct: 48 KRPEGMHREVYALLYSDKKDAPPLLPS-DTGQGYRTVKAKLGSKKVRPWKWMPFTNPARK 106
Query: 82 DNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFEL 141
D +HW R DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L
Sbjct: 107 DGAMFFHWRRAAE---EGKDYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDL 163
Query: 142 CERFDLRFIVIADRFP----SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP- 196
RFDLRF+VI DR+ R+VE+LK+RYY + + RA TD +K P
Sbjct: 164 SRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPV 217
Query: 197 YNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGS 256
++ E RK L + ++T Q ++ +L E ++I ++R R S
Sbjct: 218 FDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKI-EARKKEREKR-----------S 265
Query: 257 ESADRAVVLGDTVSPSSNIQ-------LPSAT-----VVPSTSIIA--DSASTLASLRML 302
+ + + DT + + LP VP T+ I D S +LR
Sbjct: 266 QDLQKLITAADTTAEQRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQ 325
Query: 303 RVYLRTYALEQMVQAASSSAGLRTIKRVEQALQELGV 339
R+ L SS G + IK +EQ L ELGV
Sbjct: 326 RMKL------------PSSVGQKKIKALEQMLLELGV 350
>sp|P0CO96|SWC4_CRYNJ SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=SWC4 PE=3
SV=1
Length = 463
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 22/261 (8%)
Query: 1 MDAKDILGI----PKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMP----S 52
M A+D+ I P T LPT K P RKPDGI+RE+YAL G AP + S
Sbjct: 1 MSAQDVRSILSLPPSTPLPTLSSSKKVPVP---RKPDGITRELYALIGDNAPSLADAQAS 57
Query: 53 IDVSQLKKRPP-SDEKITWQWLPFTNSARKDN-LQLYHWVRVVNGVPPTGDYSFAKYN-K 109
+ + +++P +K+ W+W FT +AR+DN ++L HW R+ + P F K+N
Sbjct: 58 LAAVKYREKPALKGKKVHWEWTKFTPAARRDNPVRLGHWARITDSDPNDSVEYFGKFNLH 117
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP--------SSRT 161
V++Y+ EY+++L DP WT +ET+ LFEL + +DLRFIV ADR+ R+
Sbjct: 118 GPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYDLRFIVAADRYAYVSPEGEKRKRS 177
Query: 162 VEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQER 221
VE++KDRYY + R ++ R S H + ++ ++E++RK+ S + T +
Sbjct: 178 VEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFDKAREIKRKQYASDLFHLTPAEIA 237
Query: 222 KDAEVLAEAKRITDSRMASRA 242
++ + E R+ + RA
Sbjct: 238 EEEALYVEITRMQQNERRFRA 258
>sp|P0CO97|SWC4_CRYNB SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=SWC4 PE=3 SV=1
Length = 463
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 22/261 (8%)
Query: 1 MDAKDILGI----PKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMP----S 52
M A+D+ I P T LPT K P RKPDGI+RE+YAL G AP + S
Sbjct: 1 MSAQDVRSILSLPPSTPLPTLSSSKKVPVP---RKPDGITRELYALIGDNAPSLADAQAS 57
Query: 53 IDVSQLKKRPP-SDEKITWQWLPFTNSARKDN-LQLYHWVRVVNGVPPTGDYSFAKYN-K 109
+ + +++P +K+ W+W FT +AR+DN ++L HW R+ + P F K+N
Sbjct: 58 LAAVKYREKPALKGKKVHWEWTKFTPAARRDNPVRLGHWARITDSDPNDSVEYFGKFNLH 117
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFP--------SSRT 161
V++Y+ EY+++L DP WT +ET+ LFEL + +DLRFIV ADR+ R+
Sbjct: 118 GPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYDLRFIVAADRYAYVSPEGEKRKRS 177
Query: 162 VEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQER 221
VE++KDRYY + R ++ R S H + ++ ++E++RK+ S + T +
Sbjct: 178 VEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFDKAREIKRKQYASDLFHLTPAEIA 237
Query: 222 KDAEVLAEAKRITDSRMASRA 242
++ + E R+ + RA
Sbjct: 238 EEEALYVEITRMQQNERRFRA 258
>sp|Q4WNY4|SWC4_ASPFU SWR1-complex protein 4 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=swc4 PE=3
SV=1
Length = 588
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 59/288 (20%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQ---RKPDGISREVYALTGGLAPLMPSIDVSQL 58
D +D+L +P P +K+ +K P + +GI+RE+YAL G AP + +I+ ++
Sbjct: 5 DVRDMLDLPAEGQPRPHKKQKVVEKRPDTDVQASEGITRELYALLGERAPPI-AINENRY 63
Query: 59 KKRPPSDEKIT---WQWLPFTNSARKDNLQLYHWVR--------VVNGVP---------- 97
K RP K+ WQ PFTN+AR D L L HW R + G
Sbjct: 64 KGRPKWMSKLRVRPWQMTPFTNNARSDGLVLRHWQRQSESAKAPALEGASEMEVDQAKAG 123
Query: 98 -----PTGDYSFAKYNKSVDV-VKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIV 151
P +Y FAKYN V +YTDEEY ++L W+++ETD L +L E +DLR++V
Sbjct: 124 GGAATPEKEYPFAKYNVKPRVPRRYTDEEYNRHLKSDDWSRQETDYLMDLVEEYDLRWVV 183
Query: 152 IADRF-----------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS---- 188
IADR+ P+ RT+E++K RYY ++ ++L P P+++S
Sbjct: 184 IADRYDFQPQPIDAEANATALVPAKQYRTMEQMKARYYFIAASMLALEHP-PSEMSEAEF 242
Query: 189 --GHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRIT 234
++K ++ +E RK ++ L++T + R++ +L E KRIT
Sbjct: 243 DLHEKMMK--FDPDRERARKELAALQLNRTADEVREEGILLEELKRIT 288
>sp|Q4PG15|SWC4_USTMA SWR1-complex protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=SWC4 PE=3 SV=1
Length = 615
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 72/297 (24%)
Query: 15 PTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLM-----------PSIDVSQL----- 58
P++ SRP+ K DG++RE++AL G AP + P + + L
Sbjct: 44 PSSAASASRPKP----KYDGMTRELFALLGDNAPSLAMTHGLDAEGKPVMGLGGLFKPKF 99
Query: 59 KKRPPSDEKI-TWQWLPFTNSARKD------------NLQLYHWV--RVVNGVPPTG--- 100
K+R EK+ W+W PF NSAR D L L+HW R + G
Sbjct: 100 KRR---KEKVRQWRWTPFLNSARDDTQIDDDVPEINHGLILHHWAPARSFSTTAADGISA 156
Query: 101 -------DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIA 153
Y +A +N + V Y+++EY ++L D WTKEETD L ELC +DLRF+VI
Sbjct: 157 EDADIDTKYQYAAFNTTSGVYSYSNDEYIQHLRDDDWTKEETDYLMELCTAYDLRFVVIH 216
Query: 154 DRFP--------------------SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLV 193
DR+ R++E+LK RYY + R ++ +R S DV ++
Sbjct: 217 DRYDWAAAQASFLAGSTSAVPQPVKERSMEDLKVRYYAICRRLIRSRI-STDDVETRQML 275
Query: 194 KDPY--NVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRAAEEPEM 248
Y + +EVERK+A++ + ++T Q ++ + E +RI + A A+E E+
Sbjct: 276 LSTYAFDKQREVERKKAVARLYTRTPEQLAEEEALYVEIRRI-EQNEAKYASEREEL 331
>sp|Q870Q1|SWC4_NEUCR SWR1-complex protein 4 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=swc-4
PE=3 SV=2
Length = 733
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 131/281 (46%), Gaps = 54/281 (19%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMPSIDVSQLKKR 61
D +D+L +P KK+R P+ G++REV L GG P+ +VS KKR
Sbjct: 5 DVRDVLNLPSDHAGPRPSKKAR-TATPRPNLKGLAREVQNL-GGDNPIAIVPEVSIFKKR 62
Query: 62 PPSDEK--ITWQWLPFTNSARKDN--LQLYHWVRVVNGVPPTG----------------- 100
K W+ FTNSAR D+ L L HW R +G G
Sbjct: 63 RTVSRKPAAKWELKAFTNSARGDDGALVLRHWKRKPDGTVQDGSAEGQDSAATADNSADK 122
Query: 101 --DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF-- 156
D SFAK+N V V +Y++++Y L P WTKEETD L EL + FDLR+ +I DR+
Sbjct: 123 PEDSSFAKFNVRVSVPQYSEDQYNTNLKHPDWTKEETDYLLELAKDFDLRWPIIWDRYEY 182
Query: 157 ----------------PSS--RTVEELKDRYYGVSRAILIARAPS------PTDVSGHPL 192
P+S RT+E+LK RYY V+ ++ + P+ ++ L
Sbjct: 183 APQQPEGETPDGMAVVPASKPRTMEDLKARYYEVAAKMMAVQKPAQYMTRPEFELYEMML 242
Query: 193 VKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
DP QE RKR L ++ + R++ +L E KRI
Sbjct: 243 HFDP---KQEQNRKRFAENTLKRSSDEAREEEALLLEIKRI 280
>sp|Q5B4T5|SWC4_EMENI SWR1-complex protein 4 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swc4 PE=3
SV=1
Length = 586
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 169/368 (45%), Gaps = 88/368 (23%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPDGISREVYALTGGLAPLMPSIDVSQLKKR 61
D +D+L +P P +K QK +++P+GI+RE++AL G AP + +I+ ++ K R
Sbjct: 5 DVRDMLDLPAEGQPRPHKK----QKVVEKRPEGITRELFALLGERAPPI-AINENRYKGR 59
Query: 62 PPSDEKITWQWLPFTN-SARKDNLQLYHWVRV--VNGVPPTGD----------------- 101
P WQ AR D+L L HW R +P D
Sbjct: 60 P------KWQTKARVRPCARSDDLVLRHWQREPESTNIPAIEDTRAEGETKEQGEHKTAD 113
Query: 102 --YSFAKYNKSVDVV-KYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF-- 156
Y FAKYN + +YT +EY ++L W++EETD L +L E +DLR++VIADR+
Sbjct: 114 REYPFAKYNIKLKFSNRYTTDEYNRHLRSEDWSREETDYLMDLVEEYDLRWVVIADRYDF 173
Query: 157 ----------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS------GHPL 192
PS RT+E++K RYY V+ ++L P P+++S +
Sbjct: 174 QPQRVDNTEETSSALVPSKQFRTMEQMKARYYFVAASMLALEHP-PSEMSEAEFDLHERM 232
Query: 193 VKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITD-------------SRM- 238
+K ++ +E RK ++ L++T + R++ +L E KRIT SR+
Sbjct: 233 MK--FDPERERHRKELAALQLNRTADEVREETVLLEELKRITANEQEFVTERRELYSRLD 290
Query: 239 ----ASRAAEEPEMPVASHV------GSESADRAVVLG-DTVSPSSNIQLPSATVVPSTS 287
S A SH+ +S R +LG D ++P+S Q P+ P ++
Sbjct: 291 VPISVSNATNYHNSQGLSHLLQTLLQADKSKKRRSILGPDGIAPTSGGQTPTIPNAPGSA 350
Query: 288 IIADSAST 295
+ A T
Sbjct: 351 RDSSRADT 358
>sp|Q4HY90|SWC4_GIBZE SWR1-complex protein 4 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=SWC4 PE=3 SV=2
Length = 624
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 123/258 (47%), Gaps = 58/258 (22%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD--GISREVYALTGGLAPLMPSIDVSQLK 59
D +D+L + T + S+ QK +P+ G++REV L GG P+ +V+ K
Sbjct: 5 DVRDVLNLGDG---TVGPRSSKKQKLAAPRPNLKGLAREVQNL-GGDNPIAIVPEVTHFK 60
Query: 60 KRPPSDEKIT--WQWLPFTNSARKD-NLQLYHWVR--------------VVNGVPPT--- 99
KR + K T W+ PF NSAR D N L HW R + G P
Sbjct: 61 KRRFTSRKPTAKWEMRPFKNSARSDSNFTLRHWRRKDEKQEGIDESQEQISQGDQPQPQK 120
Query: 100 ---GDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF 156
D +FAKYN V V +Y++ +Y++ L WTKEETD L EL + FDLR+ +I DR+
Sbjct: 121 NELEDSAFAKYNVQVSVPQYSEGQYQQSLQHVDWTKEETDYLLELAQDFDLRWPLIWDRY 180
Query: 157 ----PS--------------------SRTVEELKDRYYGVSRAILIARAP----SPTDVS 188
P+ SRT+E+LK RYY V+ ++ A+ P + + S
Sbjct: 181 EWNPPATNGEADDDGDESKAIVPATRSRTLEDLKARYYEVASKMMAAQKPVQYMTQPEFS 240
Query: 189 GHPLVKDPYNVSQEVERK 206
H L+ +N QE RK
Sbjct: 241 LHELMAH-FNPQQEKLRK 257
>sp|Q752S6|SWC4_ASHGO SWR1-complex protein 4 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SWC4 PE=3 SV=1
Length = 488
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 133/252 (52%), Gaps = 31/252 (12%)
Query: 2 DAKDILGI-PKTQLPTTQEKKSRP--QKEPQRKPDGISREVYALTGGLAPLMPSIDVSQL 58
D D+L I PK+ P Q +S K P+ + G+ RE+Y L G P + S+
Sbjct: 5 DIFDVLNIQPKSSSPHPQTSQSNAGASKTPKPQVTGMQRELYNLLGDNTPPIVIQPTSKF 64
Query: 59 KKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVR----VVNGVPPTGDYSFAKYNKSVDV 113
K R S K + W F + ++L HWV+ ++ G P SFAKY++ + +
Sbjct: 65 KDRLASLTKPSPWTHTEFEATPY---VKLSHWVKGSKELLEGQSPKS--SFAKYDQKLTL 119
Query: 114 VKYTDEEYEKYLTD---------PMWTKEETDQLFELCERFDLRFIVIADRF--PSSRTV 162
++T+ EY++++ P W+ EE LF+LC R+DLR+ ++ DR+ SRT+
Sbjct: 120 PEFTEGEYQEFMAQAAKGANSDAPTWSYEEVQYLFDLCRRYDLRWHIVYDRYMYDESRTM 179
Query: 163 EELKDRYYGVSRAILIARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQTKHQER 221
E++++ +Y V + A+ P G+PL+ Y+ QE++RK+ L+ +LS++ +
Sbjct: 180 EDIREMFYTVCQKYFQAKDP------GNPLLPSLAYSKDQEIQRKKYLTRLLSRSAAEIA 233
Query: 222 KDAEVLAEAKRI 233
++ ++ E+++
Sbjct: 234 EEEALIMESRKF 245
>sp|Q6C9M6|SWC4_YARLI SWR1-complex protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=SWC4 PE=3 SV=1
Length = 504
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
Query: 2 DAKDILGIPKTQLPT---TQEKKSRPQKEP--QRKPDGISREVYALTGGLAPLMPSIDVS 56
D +D+L +P + P TQ+ K + P ++ DG+ RE++AL G PS+ V+
Sbjct: 6 DVRDVLDLPDLE-PNDKLTQQPKRQKLAAPVGGKRMDGMQRELFALMG---ENTPSVSVT 61
Query: 57 Q------LKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVRVVNGVPPTGD-YSFAKYN 108
+ K +P K+T W W PF N AR+D L L HWVR G GD Y FA N
Sbjct: 62 KDSHTSLFKDKPQWQAKLTPWMWTPFQNQAREDGLILSHWVR--GGELTQGDQYPFAALN 119
Query: 109 KSVDVVKYTDEEYEKY-LTDPMWTKEETDQLFELCERFDLRFIVIADRF 156
+ + T E+Y+ L P WT EET L LC FDLR+ VI DR+
Sbjct: 120 TQISFPELTQEDYDGLKLATPGWTLEETRYLMHLCSEFDLRWPVIHDRW 168
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 158 SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTK 217
++RTVE+LK+R+Y V A +++ P G+ + + E++RK+ L +L+
Sbjct: 231 TARTVEDLKERFYNVVSA--MSKHPEKYTAEGYNMTTVKFPRDMEIKRKQYLERLLA--- 285
Query: 218 HQERKDAEVLAEAKRITDSR 237
R AE+ E I SR
Sbjct: 286 ---RSPAEIAEEEALILKSR 302
>sp|Q6CSS3|SWC4_KLULA SWR1-complex protein 4 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=SWC4 PE=3 SV=1
Length = 497
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 29/232 (12%)
Query: 2 DAKDILGI-PKTQLPTTQEKKSRPQ----KEPQRKPDGISREVYALTGGLAPLMPSIDVS 56
D D+L I PK+ P + + P K + + GI RE+Y+L G P +P +
Sbjct: 5 DIFDVLNIRPKSSSPDAEAQTPTPSSGTVKHNKPQVTGIQRELYSLLGDNTPTVPIKQGN 64
Query: 57 QLKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVR-----VVNGVPPTGDYSFAKYNKS 110
+ K S+ K + W ++ F ++ +L+L HWV+ V V P+ SFAK+N+
Sbjct: 65 KFKDSLNSNIKPSPWSFVEFEANS---HLKLRHWVKGSKELVGATVEPS---SFAKFNQH 118
Query: 111 VDVVKYTDEEYEKYLT--DPMWTKEETDQLFELCERFDLRFIVIADRFP---SSRTVEEL 165
+ + + ++E+++++ + W E LF+LC +D+++ VIADRF + R +++L
Sbjct: 119 LTIPSFDEQEFQQFMNGNNSEWKYGEVQYLFDLCRNYDMKWFVIADRFNYNGTERKLDDL 178
Query: 166 KDRYYGVSRAILIARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQT 216
K+ +Y V + + + P +PL+ + +E+ERK+ L +L +T
Sbjct: 179 KEMFYTVCQWYFLYKDPD------NPLISQLNFPKEKELERKKYLERLLKRT 224
>sp|P53201|SWC4_YEAST SWR1-complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SWC4 PE=1 SV=1
Length = 476
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 50/271 (18%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD----GISREVYALTGGLAPLMPSIDVSQ 57
D D+L I + T + S P +P G+ RE++ L G P + +
Sbjct: 5 DIFDVLNIKQKSRSPTNGQVSVPSSSAANRPKPQVTGMQRELFNLLGENQPPVVIKSGNN 64
Query: 58 LKKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWVR----VVNGVPPTGDYSFAKYNKSVD 112
K++ S K + W ++ F + +++ L HWV+ ++ P YS K+N+ +
Sbjct: 65 FKEKMLSTSKPSPWSFVEFKAN---NSVTLRHWVKGSKELIGDTPKESPYS--KFNQHLS 119
Query: 113 VVKYTDEEYEKYLTDP---------------------------MWTKEETDQLFELCERF 145
+ +T EEYE ++ + W+ EE + LF LC+++
Sbjct: 120 IPSFTKEEYEAFMNENEGTQKSVESEKNHNENFTNEKKDESKNSWSFEEIEYLFNLCKKY 179
Query: 146 DLRFIVIADRFP--SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKD-PYNVSQE 202
DLR+ +I DR+ +SRT+E+LK+++Y R A PS +PL+ ++ +E
Sbjct: 180 DLRWFLIFDRYSYNNSRTLEDLKEKFYYTCRNYFKASDPS------NPLLSSLNFSAEKE 233
Query: 203 VERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
+ERK+ L +LS++ + ++ ++ E+K+
Sbjct: 234 IERKKYLQRLLSRSAAEIAEEEALVVESKKF 264
>sp|Q6FTV1|SWC4_CANGA SWR1-complex protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWC4 PE=3
SV=1
Length = 532
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 76/280 (27%)
Query: 2 DAKDILGIPKTQLPTTQEKKSRPQKEPQRKPD--GISREVYALTG-GLAPLMPSIDVSQL 58
D D+L I + S P KP G+ RE+Y L G AP++ +++
Sbjct: 5 DIFDVLNIKQKSSSPNAASPSVPASGKSSKPQLTGMQRELYNLLGENEAPVVVQ-SMNRF 63
Query: 59 KKRPPSDEKIT-WQWLPFTNSARKDNLQLYHWV---RVVNGVPPTGDYSFAKYNKSVDVV 114
K++ S+ K T W N + L L HWV R + G P + F KY+ + +
Sbjct: 64 KEKLASNAKPTPWS---LANFKANEYLTLQHWVKGSRELIGEEPQ-ESEFKKYDVHLTIP 119
Query: 115 KYTDEEYEKYL-----------------------TDPMWTKEETDQ-------------- 137
++T++EY ++ TD T+E+T+
Sbjct: 120 EFTEDEYNSFIPTSNAEENEKQNIGEKVEANGDSTDVNMTEEDTNDKVKESVPQDENKST 179
Query: 138 -----------------LFELCERFDLRFIVIADRFP---SSRTVEELKDRYYGVSRAIL 177
LF+LC+++DLR+ VI DR+ S+RT+E+LK ++Y VS+
Sbjct: 180 SDNKKNNEKWEYNEVKYLFDLCKKYDLRWFVIQDRYDYENSNRTLEDLKSKFYEVSKCYF 239
Query: 178 IARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQT 216
A+ P P+++ Y+ +E +RK+ L +L+++
Sbjct: 240 KAKKPD------DPMLQSLNYSKDKETQRKKYLERLLARS 273
>sp|Q5AAJ7|SWC4_CANAL SWR1-complex protein 4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SWC4 PE=3 SV=1
Length = 635
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 126 TDPMWTKEETDQLFELCERFDLRFIVIADRFPS-SRTVEELKDRYYGVSRAILIARAPSP 184
T+ WT +ET LFELC+ F+L++ +I DRFP+ +RT E+LK+++Y + IL +
Sbjct: 303 TESEWTYKETKHLFELCQAFELKWPIIHDRFPNPNRTAEDLKEQFYRICIKILENQK--- 359
Query: 185 TDVSGHPLVKD--PYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 233
L+ Y +E+ERK+ L +L +T + ++ ++ EA+R
Sbjct: 360 --NKNQALIDSLKAYCKPRELERKQYLENLLKRTPAEIAEEESLVIEARRF 408
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 48/157 (30%)
Query: 1 MDAKDILGIPKTQLPTTQEKKSRPQKEPQRK------PDG-----ISREVYALTGGLAPL 49
M A DIL + L +++ ++P K+ Q+ PDG ++RE+Y L G P
Sbjct: 1 MSANDILDV----LNIQRDESNQPPKKKQKSSSTPTLPDGKQLTGMARELYNLVG---PN 53
Query: 50 MPSIDVS---------QLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVV------- 93
P I+++ ++KK PS W +PFT K ++L HWV+
Sbjct: 54 TPPINLNSNSYTANKEKMKKFKPS----PWTRMPFT---PKQGIELNHWVKGSKELIEQQ 106
Query: 94 ----NGVPPTGDYSFAKYNKSVDVVKYTDEE-YEKYL 125
+G P Y F KYN +++ ++ DE+ Y+ Y+
Sbjct: 107 EFEEDGTPKP--YFFEKYNVQLEIPEFVDEDTYDLYM 141
>sp|Q5NZG9|DXR_AROAE 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Aromatoleum
aromaticum (strain EbN1) GN=dxr PE=3 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 110 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRY 169
++DV+ + +E + + + + ++LFELC RF RF V+ D S +L+ R
Sbjct: 25 TLDVLARHPDRFEAF---ALTAQIQVERLFELCLRFSPRFAVLVD----SAAASDLRQRL 77
Query: 170 YGVSRAILIARAPSP-TDVSGHP 191
A + P DV+ HP
Sbjct: 78 KAAGSATEVLAGPGALVDVAAHP 100
>sp|P53675|CLH2_HUMAN Clathrin heavy chain 2 OS=Homo sapiens GN=CLTCL1 PE=1 SV=2
Length = 1640
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 36 SREVYALTGGLAPLMPSIDV-SQLKKRPPSDEKITWQWLPFTNSARKDNLQLYHWVRVVN 94
+ +V AL G + +I++ S++K ++E I W+W+ A +YHW +
Sbjct: 76 ASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWVSVNTVALVTETAVYHWSMEGD 135
Query: 95 GVPPTGDYSFAKYNKSV--DVVKYTDEEYEKYL 125
P F ++ V V+ Y +EY+K+L
Sbjct: 136 SQPMK---MFDRHTSLVGCQVIHYRTDEYQKWL 165
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1
SV=2
Length = 1009
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 124 YLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEE 164
+L DP W DQ F+ C R + VI +F +VEE
Sbjct: 928 FLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEE 968
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1
SV=1
Length = 1003
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 124 YLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEE 164
+L DP W DQ F+ C R + VI +F +VEE
Sbjct: 922 FLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEE 962
>sp|B2UR37|RHO_AKKM8 Transcription termination factor Rho OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=rho PE=3 SV=1
Length = 474
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 47 APLMPSIDVSQLKKRPPSDEKITWQWLPFTNSA 79
AP++ ID+++L+KRP +D + + LP N+A
Sbjct: 54 APVLEQIDINELRKRPLNDLQEMAEGLPIRNAA 86
>sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=wis4 PE=3 SV=1
Length = 1401
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 174 RAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLA----E 229
RA+ + P TD ++ P + +K +LS ++ E K A++LA +
Sbjct: 1296 RAVDLLTHPWITDFRKKTIITMP---PATITKKTSLSHTIT-----EEKTAQLLAGRHDD 1347
Query: 230 AKRITDSRMASRAAEEPEMPVASHVGSESADRAVVLGDTVSPSSNIQLPSATVVPST 286
+K TDS +A+ EE +PVAS+VG + + +I LP A V P T
Sbjct: 1348 SKAETDS-LAASYKEESALPVASNVGLRQPNELRI--------DSINLPPAIVTPDT 1395
>sp|O58035|SYA_PYRHO Alanine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=alaS PE=1
SV=1
Length = 915
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 14/55 (25%)
Query: 64 SDEKITWQWLPFTNSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVVKYTD 118
D K+TW+WLP T + +K +LY GV P + + VVK D
Sbjct: 671 EDRKVTWEWLPRTTAEQKYGFRLYQ-----GGVVP---------GREIRVVKIED 711
>sp|O51581|G6PD_BORBU Glucose-6-phosphate 1-dehydrogenase OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=zwf PE=3
SV=1
Length = 478
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 116 YTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRYYGVSRA 175
+TD+E+ Y+ D +W +EETD L E+ F F+ + F + + L ++ SR
Sbjct: 51 FTDKEFRLYIKDSLW-QEETDSLIEIFLNF---FVYVFGDFNEKESYKNLF-KFLDRSRE 105
Query: 176 ILIARAPSP 184
+ + SP
Sbjct: 106 TIYYLSTSP 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,283,755
Number of Sequences: 539616
Number of extensions: 5438876
Number of successful extensions: 17954
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 17866
Number of HSP's gapped (non-prelim): 64
length of query: 367
length of database: 191,569,459
effective HSP length: 119
effective length of query: 248
effective length of database: 127,355,155
effective search space: 31584078440
effective search space used: 31584078440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)