Your job contains 1 sequence.
>017710
MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGERRASKW
LDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATISTKPKK
GKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNID
PKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEF
DKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIV
HIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD
YKLPSNF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017710
(367 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087388 - symbol:EMB3126 "EMBRYO DEFECTIVE 312... 1053 2.4e-110 2
TIGR_CMR|CJE_0525 - symbol:CJE_0525 "ribosomal protein L1... 575 8.6e-56 1
UNIPROTKB|Q06797 - symbol:rplA "50S ribosomal protein L1"... 570 2.9e-55 1
TIGR_CMR|CHY_2322 - symbol:CHY_2322 "ribosomal protein L1... 557 7.0e-54 1
TIGR_CMR|BA_0098 - symbol:BA_0098 "ribosomal protein L1" ... 555 1.1e-53 1
TIGR_CMR|DET_0992 - symbol:DET_0992 "ribosomal protein L1... 550 3.8e-53 1
TIGR_CMR|SPO_3513 - symbol:SPO_3513 "ribosomal protein L1... 537 9.2e-52 1
TIGR_CMR|GSU_2866 - symbol:GSU_2866 "ribosomal protein L1... 534 1.9e-51 1
TIGR_CMR|CBU_0227 - symbol:CBU_0227 "ribosomal protein L1... 522 3.6e-50 1
TIGR_CMR|SO_0221 - symbol:SO_0221 "ribosomal protein L1" ... 519 7.4e-50 1
UNIPROTKB|P0A7L0 - symbol:rplA "50S ribosomal subunit pro... 518 9.5e-50 1
TIGR_CMR|CPS_4772 - symbol:CPS_4772 "ribosomal protein L1... 504 2.9e-48 1
UNIPROTKB|Q9KV33 - symbol:rplA "50S ribosomal protein L1"... 495 2.6e-47 1
TIGR_CMR|VC_0325 - symbol:VC_0325 "ribosomal protein L1" ... 495 2.6e-47 1
UNIPROTKB|P96932 - symbol:rplA "50S ribosomal protein L1"... 493 4.2e-47 1
TIGR_CMR|APH_1027 - symbol:APH_1027 "ribosomal protein L1... 446 4.0e-42 1
TIGR_CMR|ECH_0955 - symbol:ECH_0955 "ribosomal protein L1... 439 2.2e-41 1
TAIR|locus:2041519 - symbol:AT2G42710 species:3702 "Arabi... 423 1.1e-39 1
ASPGD|ASPL0000012808 - symbol:AN8225 species:162425 "Emer... 238 4.4e-20 1
POMBASE|SPAC1610.02c - symbol:SPAC1610.02c "mitochondrial... 213 2.0e-17 1
TIGR_CMR|NSE_0681 - symbol:NSE_0681 "ribosomal protein L1... 207 8.6e-17 1
GENEDB_PFALCIPARUM|PFL0500w - symbol:PFL0500w "50S riboso... 201 2.6e-14 1
UNIPROTKB|Q8I5U9 - symbol:PFL0500w "Mitochondrial ribosom... 201 2.6e-14 1
SGD|S000002523 - symbol:MRPL1 "Mitochondrial ribosomal pr... 192 1.1e-13 1
ZFIN|ZDB-GENE-060526-311 - symbol:mrpl1 "mitochondrial ri... 181 7.2e-12 1
UNIPROTKB|E1C7D6 - symbol:MRPL1 "Uncharacterized protein"... 168 2.9e-10 1
UNIPROTKB|Q9BYD6 - symbol:MRPL1 "39S ribosomal protein L1... 162 1.4e-09 1
UNIPROTKB|E2RQ67 - symbol:MRPL1 "Uncharacterized protein"... 162 1.4e-09 1
POMBASE|SPCC1183.08c - symbol:rpl101 "60S ribosomal prote... 151 2.5e-09 1
UNIPROTKB|A6QPQ5 - symbol:MRPL1 "39S ribosomal protein L1... 156 7.1e-09 1
POMBASE|SPBC30D10.18c - symbol:rpl102 "60S ribosomal prot... 148 7.4e-09 1
UNIPROTKB|F1RYS1 - symbol:MRPL1 "Uncharacterized protein"... 153 9.6e-09 1
UNIPROTKB|D4AC74 - symbol:Mrpl1 "Protein Mrpl1" species:1... 152 2.2e-08 1
MGI|MGI:2137202 - symbol:Mrpl1 "mitochondrial ribosomal p... 148 6.7e-08 1
FB|FBgn0037566 - symbol:mRpL1 "mitochondrial ribosomal pr... 147 9.8e-08 1
RGD|1306850 - symbol:Mrpl1 "mitochondrial ribosomal prote... 146 1.0e-07 1
ASPGD|ASPL0000057044 - symbol:AN1122 species:162425 "Emer... 131 2.1e-07 2
UNIPROTKB|G4MTC2 - symbol:MGG_04696 "Ribosomal protein" s... 135 4.7e-07 1
CGD|CAL0000752 - symbol:orf19.5698 species:5476 "Candida ... 138 5.2e-07 1
DICTYBASE|DDB_G0276871 - symbol:rpl10a "S60 ribosomal pro... 132 1.1e-06 1
CGD|CAL0005037 - symbol:RPL10A species:5476 "Candida albi... 131 1.5e-06 1
UNIPROTKB|H0Y8N7 - symbol:MRPL1 "39S ribosomal protein L1... 125 1.1e-05 1
SGD|S000006141 - symbol:RPL1A "Ribosomal 60S subunit prot... 124 1.1e-05 1
SGD|S000003103 - symbol:RPL1B "Ribosomal 60S subunit prot... 124 1.1e-05 1
ZFIN|ZDB-GENE-030131-2025 - symbol:rpl10a "ribosomal prot... 122 1.9e-05 1
UNIPROTKB|Q5E9E6 - symbol:RPL10A "60S ribosomal protein L... 118 5.9e-05 1
UNIPROTKB|E2R9V0 - symbol:RPL10A "Ribosomal protein" spec... 118 5.9e-05 1
UNIPROTKB|P62906 - symbol:RPL10A "60S ribosomal protein L... 118 5.9e-05 1
RGD|620497 - symbol:Rpl10a "ribosomal protein L10A" speci... 118 5.9e-05 1
GENEDB_PFALCIPARUM|PF14_0391 - symbol:PF14_0391 "ribosoma... 116 0.00010 1
UNIPROTKB|Q8IL58 - symbol:PF14_0391 "60S ribosomal protei... 116 0.00010 1
FB|FBgn0036213 - symbol:RpL10Ab "Ribosomal protein L10Ab"... 115 0.00013 1
UNIPROTKB|E1BKD0 - symbol:E1BKD0 "Ribosomal protein" spec... 114 0.00018 1
TAIR|locus:2176337 - symbol:AT5G22440 species:3702 "Arabi... 114 0.00018 1
MGI|MGI:1343877 - symbol:Rpl10a "ribosomal protein L10A" ... 113 0.00023 1
UNIPROTKB|G3X7N2 - symbol:G3X7N2 "Ribosomal protein" spec... 111 0.00040 1
RGD|1566137 - symbol:RGD1566137 "similar to ribosomal pro... 110 0.00052 1
RGD|1559639 - symbol:RGD1559639 "similar to ribosomal pro... 109 0.00069 1
TAIR|locus:2042087 - symbol:PGY1 "PIGGYBACK1" species:370... 108 0.00089 1
>TAIR|locus:2087388 [details] [associations]
symbol:EMB3126 "EMBRYO DEFECTIVE 3126" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0015979 "photosynthesis"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045036 "protein targeting
to chloroplast" evidence=RCA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 Prosite:PS01199 GO:GO:0005634 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0009941
EMBL:AL163818 GO:GO:0003735 GO:GO:0009535 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 UniGene:At.24203 UniGene:At.69654
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:X90855 EMBL:BT001191 EMBL:AY133519
EMBL:AY059929 EMBL:AY053410 IPI:IPI00522851 PIR:T49190 PIR:T51934
RefSeq:NP_191908.1 HSSP:Q5SLP7 ProteinModelPortal:Q9LY66 SMR:Q9LY66
STRING:Q9LY66 PaxDb:Q9LY66 PRIDE:Q9LY66 ProMEX:Q9LY66
EnsemblPlants:AT3G63490.1 GeneID:825524 KEGG:ath:AT3G63490
GeneFarm:61 TAIR:At3g63490 HOGENOM:HOG000207015 InParanoid:Q9LY66
OMA:AKGRYVK PhylomeDB:Q9LY66 ProtClustDB:CLSN2914724
Genevestigator:Q9LY66 TIGRFAMs:TIGR01169 Uniprot:Q9LY66
Length = 346
Score = 1053 (375.7 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 202/237 (85%), Positives = 223/237 (94%)
Query: 129 RDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQL 188
RDRTRSKRFLEIQ LRE KKEYD+ TAISLLKQ ++T+F E+ EAHFRLNIDPKYNDQQL
Sbjct: 108 RDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQL 167
Query: 189 RATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPD 248
RATVSLPKGTG++V VAVLAQGEK +EAK+AGAD+VG DDLIEQIKGGFMEFDKLIASPD
Sbjct: 168 RATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPD 227
Query: 249 MMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKAD 308
MMVKVA LGKILGPRGLMPNPKAGTVT NIPQAIEEFKKGKVE+RADKTGIVHIPFGK +
Sbjct: 228 MMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVN 287
Query: 309 FSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPS 365
F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+ICSSMGPSI+LNI+EM+D+K P+
Sbjct: 288 FTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPT 344
Score = 57 (25.1 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQD 24
MA C T SSLML YAA QD
Sbjct: 1 MAACATH-SSLMLAYAAASTRSQD 23
>TIGR_CMR|CJE_0525 [details] [associations]
symbol:CJE_0525 "ribosomal protein L1" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_178543.1 ProteinModelPortal:Q5HVZ2
SMR:Q5HVZ2 STRING:Q5HVZ2 GeneID:3231286 KEGG:cjr:CJE0525
PATRIC:20042772 BioCyc:CJEJ195099:GJC0-540-MONOMER Uniprot:Q5HVZ2
Length = 233
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 112/229 (48%), Positives = 154/229 (67%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
+KR E+ + KEY L AI +K + S KF ET E +LN+DP++ DQ +R +V
Sbjct: 5 AKRLKELSQKIDSNKEYALSDAIDTIKTLKSAKFDETVEIALKLNVDPRHADQMVRGSVV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTGK V+VAV+A+ K +EAKNAGAD+VG DDL+E+I+ G M FD LIA+P++M V
Sbjct: 65 LPAGTGKKVRVAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMNFDVLIATPNLMGLV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
+G+ILGP+GLMPNPK GTVT ++ QA+ K G+V +R DK G +H GK FS++
Sbjct: 125 GKVGRILGPKGLMPNPKTGTVTMDVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQ 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
L N VK+I +KP AKG Y K+A + +M PS++L +E+LD K
Sbjct: 185 LWDNVSTFVKAINKHKPAAAKGRYIKNAALSLTMSPSVKLETQELLDMK 233
>UNIPROTKB|Q06797 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B EMBL:D13303
EMBL:D50303 PIR:E69694 RefSeq:NP_387984.2 ProteinModelPortal:Q06797
SMR:Q06797 EnsemblBacteria:EBBACT00000001732 GeneID:936843
KEGG:bsu:BSU01030 PATRIC:18971715 GenoList:BSU01030
BioCyc:BSUB:BSU01030-MONOMER Uniprot:Q06797
Length = 232
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 105/222 (47%), Positives = 151/222 (68%)
Query: 133 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATV 192
+ K+++E L + K YD+ A++L+K+ ++ KF T E FRL +DP+ NDQQ+R V
Sbjct: 4 KGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAV 63
Query: 193 SLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVK 252
LP GTGK+ +V V A+GEK EA+ AGAD VG D I +I+ G+ +FD ++A+PDMM +
Sbjct: 64 VLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDYINKIQQGWFDFDVIVATPDMMGE 123
Query: 253 VASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSED 312
V +G++LGP+GLMPNPK GTVT + +AI E K GKVEYR DK G +H+P GK F ++
Sbjct: 124 VGKIGRVLGPKGLMPNPKTGTVTFEVEKAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDE 183
Query: 313 DLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L+ NF +I KP AKGVY K+ + S+MGP ++++
Sbjct: 184 KLVENFTTMYDTILKAKPAAAKGVYVKNVAVTSTMGPGVKVD 225
>TIGR_CMR|CHY_2322 [details] [associations]
symbol:CHY_2322 "ribosomal protein L1" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 OMA:AKGRYVK
TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:YP_361131.1 ProteinModelPortal:Q3A9Q3 SMR:Q3A9Q3
STRING:Q3A9Q3 GeneID:3728765 KEGG:chy:CHY_2322 PATRIC:21277711
BioCyc:CHYD246194:GJCN-2321-MONOMER Uniprot:Q3A9Q3
Length = 231
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 109/220 (49%), Positives = 148/220 (67%)
Query: 135 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSL 194
K++LE + K Y+ A SL+K++S KF ET E +L +DP++ DQQ+R V L
Sbjct: 6 KKYLEAAKKVDKTKLYEPAEAFSLVKELSFAKFDETVEVAVKLGVDPRHADQQVRGAVVL 65
Query: 195 PKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVA 254
P GTGK+ KV V A+GEK EA+ AGAD VG ++ IE+I G+++FD ++A+PDMM V
Sbjct: 66 PHGTGKTRKVLVFAKGEKAKEAEAAGADYVGAEEYIEKIAQGWIDFDVVVATPDMMGAVG 125
Query: 255 SLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDL 314
LGKILGP+GLMP+PK GTVT + +AI E K GK+EYR DK GIVH+P GK F + L
Sbjct: 126 RLGKILGPKGLMPSPKTGTVTFEVAKAIAEIKAGKIEYRVDKAGIVHVPIGKVSFPVEKL 185
Query: 315 LINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
+ NF + ++ KP GAKG Y K + S+MGP I++N
Sbjct: 186 VENFNTLMDALIKAKPAGAKGQYLKGVTVSSTMGPGIKIN 225
>TIGR_CMR|BA_0098 [details] [associations]
symbol:BA_0098 "ribosomal protein L1" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_842666.1 RefSeq:YP_016701.1
RefSeq:YP_026384.1 ProteinModelPortal:Q81VU2 SMR:Q81VU2
DNASU:1087066 EnsemblBacteria:EBBACT00000011718
EnsemblBacteria:EBBACT00000017677 EnsemblBacteria:EBBACT00000020059
GeneID:1087066 GeneID:2814891 GeneID:2848851 KEGG:ban:BA_0098
KEGG:bar:GBAA_0098 KEGG:bat:BAS0098
BioCyc:BANT260799:GJAJ-109-MONOMER
BioCyc:BANT261594:GJ7F-111-MONOMER Uniprot:Q81VU2
Length = 230
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 104/226 (46%), Positives = 148/226 (65%)
Query: 133 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATV 192
R K+++E L + Y A+ L+K+ ++ KF T EA FRL +DPK DQQ+R V
Sbjct: 4 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRLGVDPKKADQQIRGAV 63
Query: 193 SLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVK 252
LP GTGK +V V A+GEK EA+ AGAD VG D I +I+ G+ +FD ++A+PDMM +
Sbjct: 64 VLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKIQQGWFDFDVVVATPDMMGE 123
Query: 253 VASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSED 312
V LG++LGP+GLMPNPK GTVT ++ +A+ E K GKVEYR DK G +H+P GK F +
Sbjct: 124 VGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDA 183
Query: 313 DLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
L+ NF +++ KP AKG Y K+ + S+MGP +R+++ +
Sbjct: 184 KLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRVDVSTL 229
>TIGR_CMR|DET_0992 [details] [associations]
symbol:DET_0992 "ribosomal protein L1" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_181715.1
ProteinModelPortal:Q3Z7T4 STRING:Q3Z7T4 GeneID:3229744
KEGG:det:DET0992 PATRIC:21609033 BioCyc:DETH243164:GJNF-993-MONOMER
Uniprot:Q3Z7T4
Length = 237
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/227 (47%), Positives = 153/227 (67%)
Query: 132 TRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRAT 191
TR K++ + L + Y AI + K+M++ KF ET E H ++ +DPK QQLR
Sbjct: 3 TRGKKYQDAIKLLDQSLAYAPAEAIDVAKKMAAAKFDETVEMHLKMGLDPKNATQQLRGV 62
Query: 192 VSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMV 251
LP G GK+V+V V AQGE A+ AGAD+ GGD+LI++++ GF++FD I++PDMM
Sbjct: 63 AVLPHGLGKTVRVLVFAQGEAEKAAQAAGADVYGGDELIKKVEAGFLDFDVAISTPDMMS 122
Query: 252 KVASLGKILGPRGLMPNPKAGTVTT--NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADF 309
KV LGK+LG RGLMPNPK+GTV + Q IEE +KG+VE++ D++GIVHI GKA F
Sbjct: 123 KVGKLGKVLGRRGLMPNPKSGTVVPAEDFKQVIEEARKGRVEFKLDRSGIVHIILGKASF 182
Query: 310 SEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 356
LL N + V +I +KP GAKG Y KSAY+ ++MGP ++++++
Sbjct: 183 EGQALLENMTSVVDAIIRSKPTGAKGQYIKSAYLATTMGPGVKMDLR 229
>TIGR_CMR|SPO_3513 [details] [associations]
symbol:SPO_3513 "ribosomal protein L1" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_168708.1 ProteinModelPortal:Q5LMQ0
SMR:Q5LMQ0 GeneID:3194818 KEGG:sil:SPO3513 PATRIC:23380497
Uniprot:Q5LMQ0
Length = 232
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 101/210 (48%), Positives = 143/210 (68%)
Query: 146 GKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVA 205
GK+E ++ A++L+K +S KF ET E L +DP++ DQ +R V LP GTGK+V+VA
Sbjct: 17 GKEELSVEQAVALIKSAASAKFDETVEIAMNLGVDPRHADQMVRGVVGLPNGTGKTVRVA 76
Query: 206 VLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGL 265
V A+G K EA+ AGAD+VG +DL+E I+ G +EFD+ IA+PDMM V LGKILGPR L
Sbjct: 77 VFARGPKAEEAQAAGADIVGAEDLMETIQSGKIEFDRCIATPDMMPVVGRLGKILGPRNL 136
Query: 266 MPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSI 325
MPNPK GTVT ++ QA++ K G+V+++ +K G++H GK F E L+ N A V ++
Sbjct: 137 MPNPKVGTVTMDVAQAVQNAKGGEVQFKVEKAGVIHAGVGKVSFDEAKLVENVRAFVDAV 196
Query: 326 EANKPKGAKGVYWKSAYICSSMGPSIRLNI 355
KP GAKG Y K + S+MGP + +++
Sbjct: 197 AKAKPAGAKGTYLKKIALSSTMGPGVSVDV 226
>TIGR_CMR|GSU_2866 [details] [associations]
symbol:GSU_2866 "ribosomal protein L1" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_953908.1 ProteinModelPortal:Q748Y3
SMR:Q748Y3 GeneID:2686759 KEGG:gsu:GSU2866 PATRIC:22028583
BioCyc:GSUL243231:GH27-2847-MONOMER Uniprot:Q748Y3
Length = 234
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 105/211 (49%), Positives = 138/211 (65%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
+ Y L I +K + KF ET E RL +DP++ DQ +R V LP G GK V+V V
Sbjct: 19 RTYPLVEGIESVKSAAYAKFDETVEVAVRLGVDPRHADQMVRGAVVLPNGLGKDVRVLVF 78
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+GEK EA+ AGAD VG +DL+ +I+ G+ EFD IA+PDMM V +GK+LGPRGLMP
Sbjct: 79 AKGEKEKEAREAGADYVGAEDLVTKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRGLMP 138
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPK GTVT ++ +A++E K GKVE+R +K GIVH P GK F D L N LA V+++
Sbjct: 139 NPKVGTVTFDVGRAVKESKAGKVEFRVEKAGIVHAPVGKVSFDADKLKENLLALVEALLK 198
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
KP AKG Y K I S+MGP + L+I ++
Sbjct: 199 AKPSAAKGTYVKKISISSTMGPGLNLDISDV 229
>TIGR_CMR|CBU_0227 [details] [associations]
symbol:CBU_0227 "ribosomal protein L1" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:NP_819271.1 ProteinModelPortal:Q83ET3 SMR:Q83ET3
GeneID:1208108 KEGG:cbu:CBU_0227 PATRIC:17929145
BioCyc:CBUR227377:GJ7S-233-MONOMER Uniprot:Q83ET3
Length = 232
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 104/223 (46%), Positives = 146/223 (65%)
Query: 132 TRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRAT 191
T+ ++ L + R+ K Y L AI L+K+ + KF E+ + L ID + +DQ +R
Sbjct: 6 TKKRKTLAEKVQRD--KTYPLSEAIKLIKECAKAKFNESIDVAINLGIDSRKSDQAIRGA 63
Query: 192 VSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMV 251
LP G+G++VKVAV AQG+ +AK AGAD+VG DDL E+I+GG ++FD +IA+P+ M
Sbjct: 64 TVLPHGSGRTVKVAVFAQGDNVEKAKAAGADIVGLDDLAERIQGGDIDFDVVIATPETMR 123
Query: 252 KVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSE 311
V LG++LGPRGLMPNPK GTVTT++ A++ K+G+V YR DK GI+H GK +F E
Sbjct: 124 VVGKLGQVLGPRGLMPNPKVGTVTTDVASAVKNAKQGQVRYRTDKNGIIHCTIGKVNFEE 183
Query: 312 DDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L NFLA + I+ KP AKG Y K + S+MGP I ++
Sbjct: 184 KALEENFLALLNDIKKAKPSAAKGTYLKKLTLSSTMGPGIAID 226
>TIGR_CMR|SO_0221 [details] [associations]
symbol:SO_0221 "ribosomal protein L1" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:NP_715861.1
ProteinModelPortal:Q8EK77 SMR:Q8EK77 GeneID:1168104
KEGG:son:SO_0221 PATRIC:23520135 Uniprot:Q8EK77
Length = 233
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/221 (47%), Positives = 142/221 (64%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
+KR I+ +G K Y++ A++LLK++++ KF E+ + L IDP+ +DQ +R
Sbjct: 5 TKRMRVIREKVDGTKLYEINDAVALLKELATAKFVESVDVAVNLGIDPRKSDQNVRGATV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG+ V+VAV QG AK AGA+LVG DDL E+IK G M FD +IASPD M V
Sbjct: 65 LPHGTGRDVRVAVFTQGANAEAAKAAGAELVGMDDLAEKIKAGEMNFDVVIASPDAMRVV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
LG+ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF+
Sbjct: 125 GMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQ 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L N A + +++ KP AKGVY K I ++MG + ++
Sbjct: 185 LKENLEALISALKKAKPAVAKGVYVKKVSISTTMGAGVAVD 225
>UNIPROTKB|P0A7L0 [details] [associations]
symbol:rplA "50S ribosomal subunit protein L1"
species:83333 "Escherichia coli K-12" [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0045947 GO:GO:0006412 EMBL:U00006 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 PDB:2RDO PDBsum:2RDO
EMBL:V00339 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 PDB:1ML5 PDBsum:1ML5 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11
PDB:3J12 PDB:3J14 PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDB:1EG0 PDB:2GYA PDB:2GYC PDB:2WWQ
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3IZT PDB:3IZU PDB:3J01 PDB:3KCR
PDB:487D PDBsum:1EG0 PDBsum:2GYA PDBsum:2GYC PDBsum:2WWQ
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3KCR PDBsum:487D KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:S12573 RefSeq:NP_418411.1 RefSeq:YP_491477.1
ProteinModelPortal:P0A7L0 SMR:P0A7L0 DIP:DIP-35746N IntAct:P0A7L0
MINT:MINT-1268287 SWISS-2DPAGE:P0A7L0 PaxDb:P0A7L0 PRIDE:P0A7L0
EnsemblBacteria:EBESCT00000004739 EnsemblBacteria:EBESCT00000018368
GeneID:12930515 GeneID:948483 KEGG:ecj:Y75_p3213 KEGG:eco:b3984
PATRIC:32123489 EchoBASE:EB0857 EcoGene:EG10864
BioCyc:EcoCyc:EG10864-MONOMER BioCyc:ECOL316407:JW3947-MONOMER
EvolutionaryTrace:P0A7L0 Genevestigator:P0A7L0 Uniprot:P0A7L0
Length = 234
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 104/221 (47%), Positives = 142/221 (64%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
+KR I+ + K+YD+ AI+LLK++++ KF E+ + L ID + +DQ +R
Sbjct: 5 TKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG+SV+VAV QG AK AGA+LVG +DL +QIK G M FD +IASPD M V
Sbjct: 65 LPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
LG++LGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK DF D
Sbjct: 125 GQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADK 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L N A + +++ KP AKGVY K I ++MG + ++
Sbjct: 185 LKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVD 225
>TIGR_CMR|CPS_4772 [details] [associations]
symbol:CPS_4772 "ribosomal protein L1" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_271416.1
ProteinModelPortal:Q47UV6 SMR:Q47UV6 STRING:Q47UV6 GeneID:3518789
KEGG:cps:CPS_4772 PATRIC:21472361
BioCyc:CPSY167879:GI48-4778-MONOMER Uniprot:Q47UV6
Length = 232
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 101/221 (45%), Positives = 139/221 (62%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKR I+ + KEYD+ A+SLLK+ ++ F E+ + L ID + +DQ +R
Sbjct: 5 SKRARLIREKVDVTKEYDINEAVSLLKEFATANFRESVDVAVNLGIDARKSDQNVRGATV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG+ V+VAV QGE +AK AGAD+VG +DL Q+K G M FD +IASPD M V
Sbjct: 65 LPNGTGREVRVAVFTQGENAEKAKAAGADIVGMEDLAAQVKAGEMNFDVVIASPDAMRVV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
LG+ILGPRGLMPNPK GTVT ++ A++ K G++ YR DK GI+H GKADF
Sbjct: 125 GQLGQILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQIRYRNDKNGIIHTTIGKADFEPAQ 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L N + +++++ KP AKG Y K + ++MG + +N
Sbjct: 185 LQENLESLLEALKKAKPANAKGQYLKKVSLSTTMGAGVVVN 225
>UNIPROTKB|Q9KV33 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 99/221 (44%), Positives = 138/221 (62%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
+KR I+ + KEYD+ A++LLK++++ KF E+ + L ID + +DQ +R
Sbjct: 5 TKRMRTIRAKVDVTKEYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG+ ++VAV QG AK AGA+LVG +DL + +K G M FD +IASPD M V
Sbjct: 65 LPHGTGRDIRVAVFTQGANAEAAKAAGAELVGMEDLADLVKKGEMNFDVVIASPDAMRVV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
LG ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK F D
Sbjct: 125 GQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQ 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L N A + +++ KP AKGV+ K I ++MG + ++
Sbjct: 185 LKENLEALLVALKKAKPSSAKGVFVKKVSISTTMGAGVAVD 225
>TIGR_CMR|VC_0325 [details] [associations]
symbol:VC_0325 "ribosomal protein L1" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:C82338 RefSeq:NP_229979.1
ProteinModelPortal:Q9KV33 SMR:Q9KV33 GeneID:2615091 KEGG:vch:VC0325
PATRIC:20079707 Uniprot:Q9KV33
Length = 233
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 99/221 (44%), Positives = 138/221 (62%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
+KR I+ + KEYD+ A++LLK++++ KF E+ + L ID + +DQ +R
Sbjct: 5 TKRMRTIRAKVDVTKEYDINEAVALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG+ ++VAV QG AK AGA+LVG +DL + +K G M FD +IASPD M V
Sbjct: 65 LPHGTGRDIRVAVFTQGANAEAAKAAGAELVGMEDLADLVKKGEMNFDVVIASPDAMRVV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
LG ILGPRGLMPNPK GTVT N+ +A++ K G+V YR DK GI+H GK F D
Sbjct: 125 GQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVTFEADQ 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 354
L N A + +++ KP AKGV+ K I ++MG + ++
Sbjct: 185 LKENLEALLVALKKAKPSSAKGVFVKKVSISTTMGAGVAVD 225
>UNIPROTKB|P96932 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0005829
GO:GO:0005886 GO:GO:0005618 GO:GO:0006417 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
EMBL:BX842574 GO:GO:0003735 GO:GO:0000049 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B PIR:F70613 RefSeq:NP_215155.1 RefSeq:NP_335081.1
RefSeq:YP_006513982.1 ProteinModelPortal:P96932 SMR:P96932
PRIDE:P96932 EnsemblBacteria:EBMYCT00000001871
EnsemblBacteria:EBMYCT00000072842 GeneID:13318527 GeneID:888043
GeneID:925953 KEGG:mtc:MT0669.1 KEGG:mtu:Rv0641 KEGG:mtv:RVBD_0641
PATRIC:18123195 TubercuList:Rv0641 Uniprot:P96932
Length = 235
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 97/197 (49%), Positives = 129/197 (65%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A L K+ SSTK T E RL +DP+ DQ +R TV+LP GTGK+ +VAV A GEK +
Sbjct: 26 AAKLAKETSSTKQDATVEVAIRLGVDPRKADQMVRGTVNLPHGTGKTARVAVFAVGEKAD 85
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
A AGAD+VG DDLIE+I+GG++EFD IA+PD M KV + ++LGPRGLMPNPK GTV
Sbjct: 86 AAVAAGADVVGSDDLIERIQGGWLEFDAAIATPDQMAKVGRIARVLGPRGLMPNPKTGTV 145
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T ++ +A+ + K GK+ +R DK +H GKA F E L N+ AA+ + KP +K
Sbjct: 146 TADVAKAVADIKGGKINFRVDKQANLHFVIGKASFDEKLLAENYGAAIDEVLRLKPSSSK 205
Query: 335 GVYWKSAYICSSMGPSI 351
G Y K + ++ GP I
Sbjct: 206 GRYLKKITVSTTTGPGI 222
>TIGR_CMR|APH_1027 [details] [associations]
symbol:APH_1027 "ribosomal protein L1" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 RefSeq:YP_505586.1
ProteinModelPortal:Q2GJ65 STRING:Q2GJ65 GeneID:3931039
KEGG:aph:APH_1027 PATRIC:20950804 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 BioCyc:APHA212042:GHPM-1034-MONOMER
HAMAP:MF_01318_B Uniprot:Q2GJ65
Length = 216
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 89/205 (43%), Positives = 133/205 (64%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQ 209
Y + I L + ++ +F E+ + +L+ + +R LPKG G+ V+VAVLA+
Sbjct: 8 YTPEEGIDQLLKSTTARFKESVDVAIKLSTGDSRSGDSIRGVAVLPKGLGREVRVAVLAK 67
Query: 210 GEKFNEAKNAGADLVGGDDLIEQIKGGF-MEFDKLIASPDMMVKVASLGKILGPRGLMPN 268
GE +AK+AGAD+VG DLIE+IK G ++FD IA+PD M +V+++ KILGPRGLMPN
Sbjct: 68 GEYAKQAKDAGADVVGDSDLIEEIKKGRKLDFDWCIATPDFMSQVSAIAKILGPRGLMPN 127
Query: 269 PKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEAN 328
PK GTVT +I + + K G+V +R+DK GIVH+ G FS +DL+ N A V +++
Sbjct: 128 PKFGTVTFDIAKMVGIVKSGQVRFRSDKYGIVHVKIGDVGFSREDLMENLRAVVSAVQGL 187
Query: 329 KPKGAKGVYWKSAYICSSMGPSIRL 353
KP KG ++K+ ++ S+MG S R+
Sbjct: 188 KPATVKGAFFKAVFLNSTMGKSFRI 212
>TIGR_CMR|ECH_0955 [details] [associations]
symbol:ECH_0955 "ribosomal protein L1" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_507743.1
ProteinModelPortal:Q2GFP0 STRING:Q2GFP0 GeneID:3927409
KEGG:ech:ECH_0955 PATRIC:20577292
BioCyc:ECHA205920:GJNR-958-MONOMER Uniprot:Q2GFP0
Length = 220
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 84/206 (40%), Positives = 134/206 (65%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQ 209
YD+++ + + + + F E+ + LNI+ +D+Q+R V LPKG G+ +KVAV A+
Sbjct: 10 YDVESGLRKVIESAKANFCESVDVAINLNINSSKSDEQVRGCVVLPKGLGREIKVAVFAK 69
Query: 210 GEKFNEAKNAGADLVGGDDLIEQIKGGF--MEFDKLIASPDMMVKVASLGKILGPRGLMP 267
G A+ A AD+VG ++LIE++K ++ D + +PD M V+S+ KILGP+GLMP
Sbjct: 70 GGYLEMAREAMADIVGDEELIEEVKKKQCKLDVDWCLTTPDFMASVSSIAKILGPKGLMP 129
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPK TVT + +AI+ K G++++++DKTGIVH G FS +DLL NF A + +++
Sbjct: 130 NPKFNTVTFELAKAIKMIKSGQIKFKSDKTGIVHAKIGNIKFSIEDLLENFNAVISAVKQ 189
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRL 353
KP KG+Y+K +I S+MG S+++
Sbjct: 190 CKPASIKGLYFKDVFIISTMGKSVKV 215
>TAIR|locus:2041519 [details] [associations]
symbol:AT2G42710 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
HSSP:P27150 EMBL:AY091124 EMBL:AY113995 EMBL:AK118309
IPI:IPI00522914 RefSeq:NP_850375.1 UniGene:At.36979
ProteinModelPortal:Q8RWT4 SMR:Q8RWT4 STRING:Q8RWT4 PaxDb:Q8RWT4
PRIDE:Q8RWT4 EnsemblPlants:AT2G42710.1 GeneID:818871
KEGG:ath:AT2G42710 TAIR:At2g42710 InParanoid:Q8RWT4 OMA:KYAGYVN
PhylomeDB:Q8RWT4 ProtClustDB:CLSN2680207 Genevestigator:Q8RWT4
Uniprot:Q8RWT4
Length = 415
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 92/223 (41%), Positives = 138/223 (61%)
Query: 143 LREGKKE-YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKS 201
L+ GKK +DL AI +K + KF ET EAH RL I+ ++ +R T++LP K
Sbjct: 180 LKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKD 239
Query: 202 VKVAVLAQGEKFNEAKNAGADLVGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKIL 260
VKVA A+G +AK AGAD+VGG +LIE+I K G ++FD+ +A+P MM +V + +IL
Sbjct: 240 VKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRIL 299
Query: 261 GPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLA 320
GLMPNPK G+VT ++ +A+++ K G ++R DKT I+H+P GK FSE+ L N A
Sbjct: 300 NNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGA 359
Query: 321 AVKSIEANKPKGAKGV-----YWKSAYICSSMGPSIRLNIKEM 358
+ ++ KP G K Y + ++CS+MG ++I+ +
Sbjct: 360 FMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402
>ASPGD|ASPL0000012808 [details] [associations]
symbol:AN8225 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412 GO:GO:0003723
EMBL:BN001302 GO:GO:0003735 EMBL:AACD01000144 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:YLRAFEV OrthoDB:EOG49631S RefSeq:XP_681494.1
ProteinModelPortal:Q5AU05 STRING:Q5AU05
EnsemblFungi:CADANIAT00004275 GeneID:2868991 KEGG:ani:AN8225.2
HOGENOM:HOG000159984 Uniprot:Q5AU05
Length = 310
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 62/191 (32%), Positives = 97/191 (50%)
Query: 172 EAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQ-GEKF-NEAKNAGADLVGGDDL 229
E H RL + + +R + P ++ V+ G K +A AGA LVG D++
Sbjct: 109 EVHIRLKT--RRDGPVIRNMIRFPHSVQTESRICVICPPGSKHAKDALAAGAVLVGEDEV 166
Query: 230 IEQIKGGFMEFDKLIASPDMMVKVAS--LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKK 287
E +K G +EFD+ +A PD M +A LG+ILGPRGLMP+ K GTV ++ +E +
Sbjct: 167 FEVVKSGRIEFDRCLAHPDSMPALAKAGLGRILGPRGLMPSAKTGTVVEDVAARVEMLRG 226
Query: 288 GKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEAN----KPKGAKGVYWKSAYI 343
G V YR ++ +V +P G+ FS + L N + ++ + + K +Y +
Sbjct: 227 GTV-YR-ERDAVVRLPIGQLGFSPEQLRDNLRVTIDQVKKDAASLNDRITKEIY--EVVL 282
Query: 344 CSSMGPSIRLN 354
S+ GP LN
Sbjct: 283 SSTHGPGFSLN 293
>POMBASE|SPAC1610.02c [details] [associations]
symbol:SPAC1610.02c "mitochondrial ribosomal protein
subunit L1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR002143 InterPro:IPR005879
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 PomBase:SPAC1610.02c EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 TIGRFAMs:TIGR01170
RefSeq:NP_001018241.2 ProteinModelPortal:Q9P6M9 STRING:Q9P6M9
EnsemblFungi:SPAC1610.02c.1 GeneID:3361520 KEGG:spo:SPAC1610.02c
OMA:YLRAFEV OrthoDB:EOG49631S NextBio:20811562 Uniprot:Q9P6M9
Length = 253
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 63/226 (27%), Positives = 105/226 (46%)
Query: 135 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQ--QLRATV 192
KRF+ N + + T K + S + + L+I K N + R +
Sbjct: 30 KRFISQLNKKSNFPALAM-TVPEATKYLKSVSISVPYVGSYMLSIALKSNRRAPSARGQI 88
Query: 193 SLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVK 252
+ P + K+ V A+G +EA GA VG +DL+++I+ +EF K A P+
Sbjct: 89 AFPHPFQEPPKICVFAKGAAADEALKLGATYVGAEDLVKKIQTEPLEFSKCFAHPNSAEL 148
Query: 253 VASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSED 312
+ + K+LG + LMP+ K GT++ + IE V+YR + G +++P GK FS+
Sbjct: 149 LPQVAKLLGSKRLMPSIKRGTISDELKPLIESALTA-VDYRQNDAGSINLPVGKLGFSDK 207
Query: 313 DLLINFLAAVKSIEANKPK--GAKGVYWKSAYICSSMGPSIRLNIK 356
+L N A V ++ K G V K ++ +S +I L K
Sbjct: 208 ELQENIEALVSNVRFTLAKLPGKVKVTVKHVHLSASHAIAIPLQYK 253
>TIGR_CMR|NSE_0681 [details] [associations]
symbol:NSE_0681 "ribosomal protein L1" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042255 "ribosome
assembly" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_506559.1
ProteinModelPortal:Q2GD87 STRING:Q2GD87 GeneID:3932130
KEGG:nse:NSE_0681 PATRIC:22681381 OMA:CESVFAT
BioCyc:NSEN222891:GHFU-695-MONOMER Uniprot:Q2GD87
Length = 209
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 49/128 (38%), Positives = 73/128 (57%)
Query: 225 GGDDLIEQIKG--GFMEFDKL-IASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQA 281
GG++LIE+IK F++ K +ASP MM K++ + +ILGPRGLMP+ K G VT +I A
Sbjct: 72 GGEELIERIKAKKNFVKGYKYSLASPPMMSKLSKIARILGPRGLMPDSKYGLVTHDIAAA 131
Query: 282 IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK-GVYWKS 340
+ GK ++ +K G++H G D L NF +S+ A +PK Y +S
Sbjct: 132 VTAILGGKALFKTNKAGVMHSKIGNLGMGFDKLRENFQIFCESVFATRPKNVSLQSYVRS 191
Query: 341 AYICSSMG 348
+ S+MG
Sbjct: 192 ISVSSTMG 199
>GENEDB_PFALCIPARUM|PFL0500w [details] [associations]
symbol:PFL0500w "50S ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 201 (75.8 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 65/228 (28%), Positives = 113/228 (49%)
Query: 135 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYN----DQQLRA 190
K FL+I L + EY L AI +K ++ KF E+ + + L+ +PK + + ++
Sbjct: 106 KDFLDI--LPKKTNEYTLMEAIEKIKTLAIHKFVESIDIY--LSFNPKKSKMTKNDNIKT 161
Query: 191 TVSLPKGTGKS--VKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDK-----L 243
++ P K KV V+ + A +GAD+VG DDLI +IK + K L
Sbjct: 162 FITFPHNLKKKREKKVYVVTNAKLQKIASQSGADVVGEDDLINKIKEREIRLQKRNNNFL 221
Query: 244 IASPDMMVKVASLGKILGPRGLMPNPKAGTVTTN--IPQAIEEFKKGKVE-YRADKTGIV 300
I + D + K+ +GK +G +GLMPN K GT+ + +P+ ++ FK ++ +K +
Sbjct: 222 ICTNDCIHKLTRVGKEIGRKGLMPNEKCGTLVSEFLLPKHVKLFKSENTYIFKLNKLNTL 281
Query: 301 HIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMG 348
+I G S D++ N + +E + + K+ Y+ S+MG
Sbjct: 282 NINIGDVYMSNDEIRENINHLFEHLENLEFFHFNFKHVKTIYLSSTMG 329
>UNIPROTKB|Q8I5U9 [details] [associations]
symbol:PFL0500w "Mitochondrial ribosomal protein L12,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=ISS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014188 SUPFAM:SSF56808
GO:GO:0020011 GO:GO:0022625 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_001350509.1 ProteinModelPortal:Q8I5U9
EnsemblProtists:PFL0500w:mRNA GeneID:811153 KEGG:pfa:PFL0500w
EuPathDB:PlasmoDB:PF3D7_1210000 HOGENOM:HOG000281192
ProtClustDB:CLSZ2433515 Uniprot:Q8I5U9
Length = 339
Score = 201 (75.8 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 65/228 (28%), Positives = 113/228 (49%)
Query: 135 KRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYN----DQQLRA 190
K FL+I L + EY L AI +K ++ KF E+ + + L+ +PK + + ++
Sbjct: 106 KDFLDI--LPKKTNEYTLMEAIEKIKTLAIHKFVESIDIY--LSFNPKKSKMTKNDNIKT 161
Query: 191 TVSLPKGTGKS--VKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDK-----L 243
++ P K KV V+ + A +GAD+VG DDLI +IK + K L
Sbjct: 162 FITFPHNLKKKREKKVYVVTNAKLQKIASQSGADVVGEDDLINKIKEREIRLQKRNNNFL 221
Query: 244 IASPDMMVKVASLGKILGPRGLMPNPKAGTVTTN--IPQAIEEFKKGKVE-YRADKTGIV 300
I + D + K+ +GK +G +GLMPN K GT+ + +P+ ++ FK ++ +K +
Sbjct: 222 ICTNDCIHKLTRVGKEIGRKGLMPNEKCGTLVSEFLLPKHVKLFKSENTYIFKLNKLNTL 281
Query: 301 HIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMG 348
+I G S D++ N + +E + + K+ Y+ S+MG
Sbjct: 282 NINIGDVYMSNDEIRENINHLFEHLENLEFFHFNFKHVKTIYLSSTMG 329
>SGD|S000002523 [details] [associations]
symbol:MRPL1 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=IPI] [GO:0006412 "translation" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IC] InterPro:IPR002143
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000002523
Prosite:PS01199 EMBL:BK006938 GO:GO:0003723 GO:GO:0005762
GO:GO:0003735 GO:GO:0032543 EMBL:Z48758 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 TIGRFAMs:TIGR01170 OMA:YLRAFEV OrthoDB:EOG49631S
EMBL:AY557683 PIR:S52681 RefSeq:NP_010401.1
ProteinModelPortal:Q04599 SMR:Q04599 DIP:DIP-5223N IntAct:Q04599
MINT:MINT-569104 STRING:Q04599 PaxDb:Q04599 PeptideAtlas:Q04599
EnsemblFungi:YDR116C GeneID:851694 KEGG:sce:YDR116C CYGD:YDR116c
HOGENOM:HOG000248778 NextBio:969353 Genevestigator:Q04599
GermOnline:YDR116C Uniprot:Q04599
Length = 285
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 54/172 (31%), Positives = 94/172 (54%)
Query: 188 LRATVSLPKGTGKSVKVAVLAQGE-KFNEAKNAGAD-LVGGDDLIEQIKGG--FMEFDKL 243
L +V+ PK + +K+A E K E + + L+GG DL+ +IK G ++FDK
Sbjct: 113 LSGSVTFPKPL-RYIKIAAFTNDESKLEELREKYPNHLIGGADLVAKIKSGEISVDFDKA 171
Query: 244 IASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHI 302
A+PD++ + S + +ILGPRG++P+ K GTV+ +I ++E G + +R + + I
Sbjct: 172 FATPDIVPALQSQVARILGPRGVLPSVKKGTVSDDISSLLQE-SLGSMPFR-QRGNSISI 229
Query: 303 PFGKADFSEDDLLINFL---AAVKSIEANKPKGAKGVYWKSAYICSSMGPSI 351
GK F++ ++L N + AA K+ N+ + K+ + S+ GP I
Sbjct: 230 GVGKCYFTDREILQNIISARAAFKTAVDNQKSKKPNILSKTT-LSSTHGPGI 280
>ZFIN|ZDB-GENE-060526-311 [details] [associations]
symbol:mrpl1 "mitochondrial ribosomal protein L1"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 ZFIN:ZDB-GENE-060526-311 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 EMBL:BX640512
Gene3D:3.30.190.20 Gene3D:3.40.50.790 GeneTree:ENSGT00390000003587
InterPro:IPR024663 Pfam:PF13003 IPI:IPI00997672
Ensembl:ENSDART00000076835 ArrayExpress:F1QMG1 Uniprot:F1QMG1
Length = 324
Score = 181 (68.8 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 64/219 (29%), Positives = 100/219 (45%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA---HFRLN--IDPKYNDQQLRATVSLPKGTGKSV-K 203
Y+L AI +LK F+ + + RLN ++ K T+ LP + K
Sbjct: 106 YELTVAIDMLKSFQKLDFSAENQPIYINLRLNMKLEKKRKLDPFVRTIHLPHPFKSDINK 165
Query: 204 VAVLAQGEKFNEAKNA---GADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKIL 260
V V EK ++A+ A GA + GG +L E+I + D +A PD++ K+ L L
Sbjct: 166 VVVFT--EKPDQARIALENGAAVAGGVELFEKILADEITADFYLAEPDILPKLVPLKNKL 223
Query: 261 GPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLA 320
R P K GTV NIP+ +E FK G EY + V+ D ++ +L N
Sbjct: 224 --RKKFPKSKRGTVGINIPRMLELFKTGH-EYIVEDI-YVNTEVATLDMPKEHILENIHT 279
Query: 321 AVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
+K + ++KP G A +CS + L ++E+L
Sbjct: 280 ILKDVASHKP-AEFGPIIDRAIVCSRSSEGLHLKLEELL 317
>UNIPROTKB|E1C7D6 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
CTD:65008 GeneTree:ENSGT00390000003587 InterPro:IPR024663
Pfam:PF13003 EMBL:AADN02016133 IPI:IPI00598672 RefSeq:XP_420471.2
Ensembl:ENSGALT00000016805 GeneID:422507 KEGG:gga:422507
OMA:IQADFYV NextBio:20825131 Uniprot:E1C7D6
Length = 332
Score = 168 (64.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 56/220 (25%), Positives = 106/220 (48%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAE-AHFRLNID---PKYND-QQLRATVSLP-KGTGK 200
+ Y+++ A+ +LK+ FT + + + +D PK Q + V LP + T +
Sbjct: 88 RPSYNVEEAVGMLKKFQELDFTYPKQFVYINVTLDMELPKKKKVDQFASIVLLPYRFTDE 147
Query: 201 SVKVAVLAQGEKFNE-AKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKI 259
+ KV V + E+ E A+ GA +VGG +LI+ I ++ D IA P ++ K+ L
Sbjct: 148 TNKVLVFTENEQEAEIARENGAAVVGGVELIKWILEDEIQMDFYIAVPAIIPKLIPLRNK 207
Query: 260 LGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFL 319
L + P+ + ++ +IP+ ++ F++G +EY ++ + D + ++ N
Sbjct: 208 LKRK--YPSTRRNSLGHDIPKMLQFFREG-LEYTVQDERLIKTRIARLDMPTEQIVANLK 264
Query: 320 AAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
++ I KP A G + K I SS + LN+ +L
Sbjct: 265 TIIEDICKFKPSSA-GPFVKKLVIRSSTSEGLLLNLDGLL 303
>UNIPROTKB|Q9BYD6 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:CH471057 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790 CTD:65008
eggNOG:NOG271882 HOVERGEN:HBG061212 OMA:HRETHHP OrthoDB:EOG4K6G54
InterPro:IPR024663 Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AF212225
EMBL:AC112225 EMBL:AC114801 EMBL:BC014356 EMBL:BC015109
EMBL:BC032595 EMBL:AB049474 EMBL:CR457191 EMBL:AK024791
IPI:IPI00549381 RefSeq:NP_064621.3 UniGene:Hs.532019
ProteinModelPortal:Q9BYD6 SMR:Q9BYD6 IntAct:Q9BYD6 STRING:Q9BYD6
PhosphoSite:Q9BYD6 DMDM:239938694 PaxDb:Q9BYD6 PRIDE:Q9BYD6
DNASU:65008 Ensembl:ENST00000315567 GeneID:65008 KEGG:hsa:65008
UCSC:uc003hku.2 GeneCards:GC04P078694 HGNC:HGNC:14275 HPA:HPA043656
MIM:611821 neXtProt:NX_Q9BYD6 PharmGKB:PA30938 InParanoid:Q9BYD6
GenomeRNAi:65008 NextBio:67192 ArrayExpress:Q9BYD6 Bgee:Q9BYD6
CleanEx:HS_MRPL1 Genevestigator:Q9BYD6 GermOnline:ENSG00000169288
Uniprot:Q9BYD6
Length = 325
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKSV-K 203
Y+++ A+ LLK+ FT ++ + L +D K N + + +SLP + K
Sbjct: 97 YEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKKKNVEPFTSVLSLPYPFASEINK 156
Query: 204 VAVLAQG-EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGP 262
VAV + + A+ GA GG LI++I + D +A P++M ++ L K L
Sbjct: 157 VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMPELNRLRKKLNK 216
Query: 263 RGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
+ P ++ +IP+ +E FK G +++ ++ + D S D + N A
Sbjct: 217 K--YPKLSRNSIGRDIPKMLELFKNGHEIKVDEERENFLQTKIATLDMSSDQIAANLQAV 274
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
+ + ++P G + A++ SS + L I +L
Sbjct: 275 INEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKIDPLL 311
>UNIPROTKB|E2RQ67 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 CTD:65008 GeneTree:ENSGT00390000003587
OMA:HRETHHP InterPro:IPR024663 Pfam:PF13003 TIGRFAMs:TIGR01170
EMBL:AAEX03016692 RefSeq:XP_535620.1 Ensembl:ENSCAFT00000013848
GeneID:478443 KEGG:cfa:478443 Uniprot:E2RQ67
Length = 328
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 53/218 (24%), Positives = 100/218 (45%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKSV-K 203
Y+++ AI LLK+ + FT + + L +D K + + +S P + K
Sbjct: 100 YEVEKAIQLLKKFQTLDFTNPKQGVYLDLTLDMSLGKKKKVEPFASVLSFPYPFISEINK 159
Query: 204 VAVLAQG-EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGP 262
VAVL + + A+ GA GG +LI++I ++ D +A P++M ++ L K L
Sbjct: 160 VAVLTENASEIKIAEENGAAFAGGTNLIQKILDDEIQSDFYVAVPEIMPELNPLKKKLKK 219
Query: 263 RGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
R P ++ +IP+ +E FK G +++ ++ + D D + N A
Sbjct: 220 R--FPKLTRNSIGRDIPKMLELFKTGHEIKVDEERENFLETKIATLDMQSDQIAANLQAV 277
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
+ + ++P G + A++ +S + L IK +L
Sbjct: 278 ISEVCKHRPLNL-GPFVVRAFLRTSTSEGLLLKIKPLL 314
>POMBASE|SPCC1183.08c [details] [associations]
symbol:rpl101 "60S ribosomal protein L10a" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155
PomBase:SPCC1183.08c Prosite:PS01199 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 OMA:VAVGHMK Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OrthoDB:EOG40ZV6T PIR:T40848
RefSeq:NP_587891.1 ProteinModelPortal:O74836 SMR:O74836
STRING:O74836 EnsemblFungi:SPCC1183.08c.1 GeneID:2539222
KEGG:spo:SPCC1183.08c NextBio:20800392 Uniprot:O74836
Length = 216
Score = 151 (58.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 56/210 (26%), Positives = 99/210 (47%)
Query: 158 LLKQMSSTK--FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
+LK K FTET E L N DP+ D++ T+ LP ++ + +L +
Sbjct: 16 ILKGSEEKKRNFTETVELQIGLKNYDPQ-RDKRFSGTIKLPNVPRPNMAICILGDAHDLD 74
Query: 215 EAKNAGADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRGLMPN 268
AK+ G D + DDL + K + ++D IAS ++++K + ++LGP GL
Sbjct: 75 RAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIAS-EVLIK--QIPRLLGP-GLS-- 128
Query: 269 PKAGTVTTNIPQAIEEFKK-----GKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVK 323
KAG + + A + + K ++++ K + + G + SE+ L+ N + AV
Sbjct: 129 -KAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVN 187
Query: 324 SIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ + KG + + S + S+MG RL
Sbjct: 188 FLVSLLKKGWQNI--GSLVVKSTMGKPHRL 215
>UNIPROTKB|A6QPQ5 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 GO:GO:0005739 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 EMBL:BC149433 IPI:IPI00867346
RefSeq:NP_001095314.1 UniGene:Bt.66027 PDB:2FTC PDBsum:2FTC
ProteinModelPortal:A6QPQ5 STRING:A6QPQ5 Ensembl:ENSBTAT00000045390
GeneID:504835 KEGG:bta:504835 CTD:65008 eggNOG:NOG271882
GeneTree:ENSGT00390000003587 HOGENOM:HOG000293225
HOVERGEN:HBG061212 InParanoid:A6QPQ5 OMA:HRETHHP OrthoDB:EOG4K6G54
EvolutionaryTrace:A6QPQ5 NextBio:20866854 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 Uniprot:A6QPQ5
Length = 325
Score = 156 (60.0 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 54/218 (24%), Positives = 98/218 (44%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKG-TGKSVK 203
Y+++ A++LLK+ FT + + L +D K + + +SLP + K
Sbjct: 97 YEVEKAVNLLKKFQVLDFTNPKQGVYLDLTLDMTLGKKKKVEPFASVLSLPYPFISEMSK 156
Query: 204 VAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGP 262
VAV + A+ GA GG +LI++I ++ D IA P++M ++ L K L
Sbjct: 157 VAVFTGNASEIKIAEENGAAFAGGTNLIQKILDDEIQADFYIAVPEIMPELNPLRKKLKT 216
Query: 263 RGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
R P +V +IP+ +E FK G +++ ++ + D D + N A
Sbjct: 217 R--FPKFNRNSVGRDIPKMLELFKTGLEIKVDEERENFLETKIATLDMPSDQIAANLQAV 274
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
+ + +P G + A++ SS + L I+ +L
Sbjct: 275 INEVCRQRPLNL-GPFVVRAFLRSSTSEGLLLKIEPLL 311
>POMBASE|SPBC30D10.18c [details] [associations]
symbol:rpl102 "60S ribosomal protein L10a"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 PomBase:SPBC30D10.18c Prosite:PS01199
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG PIR:T40178 RefSeq:NP_596267.1
ProteinModelPortal:O14363 SMR:O14363 STRING:O14363 PRIDE:O14363
EnsemblFungi:SPBC30D10.18c.1 GeneID:2540378 KEGG:spo:SPBC30D10.18c
OrthoDB:EOG40ZV6T NextBio:20801506 Uniprot:O14363
Length = 216
Score = 148 (57.2 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 55/217 (25%), Positives = 104/217 (47%)
Query: 151 DLKTAI-SLLKQMSSTK--FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAV 206
++++++ ++LK K FTET E L N DP+ D++ T+ LP ++ + +
Sbjct: 8 NIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQ-RDKRFSGTIKLPNVPRPNMSICI 66
Query: 207 LAQGEKFNEAKNAGADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKIL 260
L + AK+ G D + DDL + K + ++D IAS ++++K + ++L
Sbjct: 67 LGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIAS-EVLIK--QIPRLL 123
Query: 261 GP----RGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLI 316
GP G P+P + + ++ I E K ++++ K + + G D +E+ L
Sbjct: 124 GPGLSKAGKFPSPVSHS--DDLYGKIIEVKS-TIKFQLKKVLCLGVAVGHVDMAEEQLAA 180
Query: 317 NFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
N A+ + + KG + + S I S+MG RL
Sbjct: 181 NLSLAINFLVSLLKKGWQNI--GSLVIKSTMGKPYRL 215
>UNIPROTKB|F1RYS1 [details] [associations]
symbol:MRPL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 PIRSF:PIRSF002155
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000003587 OMA:HRETHHP InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:CU929383
Ensembl:ENSSSCT00000009847 Uniprot:F1RYS1
Length = 278
Score = 153 (58.9 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKG-TGKSVK 203
Y+++ AI LLK+ FT + + L +D K + + +SLP T + K
Sbjct: 50 YEVEKAIHLLKKFQVLDFTNPNQGVYLDLTLDMTLGKKKKVEPFASVLSLPYPFTSEINK 109
Query: 204 VAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGP 262
VAV + A+ GA GG +LI++I ++ D +A P++M ++ L K L
Sbjct: 110 VAVFTGNASEIKIAEEKGAAFAGGTNLIQKILDDEIQPDFYVAVPEIMPELNPLRKKLKK 169
Query: 263 RGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
R P ++ +IP+ +E FK G +++ ++ + + S D + N A
Sbjct: 170 R--FPKLTRNSIGRDIPKMLELFKTGHEIKVDEERENFLETKIATLNMSSDQIAANLQAV 227
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
+ + +P G + A++ SS + + I+ +L
Sbjct: 228 INEVCRQRPLNL-GPFVVRAFLRSSTSEGLLIKIEPLL 264
>UNIPROTKB|D4AC74 [details] [associations]
symbol:Mrpl1 "Protein Mrpl1" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 RGD:1306850 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 IPI:IPI00782533
Ensembl:ENSRNOT00000060834 ArrayExpress:D4AC74 Uniprot:D4AC74
Length = 331
Score = 152 (58.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKS 201
++ Y+++ AI LLK+ FT + + L +D K + + ++LP
Sbjct: 99 RRIYEVEKAIHLLKKFQVLDFTNPKQGVYLDLTLDMALGKKKKVEPFASVIALPHPFSSE 158
Query: 202 V-KVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKI 259
V KVAV + A+ GA GG DL+++I + D +A P++M ++ L K
Sbjct: 159 VNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVVDFYVAVPEIMGELNPLRKK 218
Query: 260 LGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINF 318
L R P ++ +IP+ +E FK ++ ++ + D D L N
Sbjct: 219 LKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIATLDMPSDQLAANL 276
Query: 319 LAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
A + + ++P G + A++ SS + L +L KL
Sbjct: 277 QAVINEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLLPKKL 320
>MGI|MGI:2137202 [details] [associations]
symbol:Mrpl1 "mitochondrial ribosomal protein L1"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=ISO] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005879
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
EMBL:AB049632 MGI:MGI:2137202 GO:GO:0005739 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790 CTD:65008
GeneTree:ENSGT00390000003587 HOGENOM:HOG000293225
HOVERGEN:HBG061212 OrthoDB:EOG4K6G54 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AK010343 EMBL:AK142249
EMBL:BC028774 EMBL:BC061042 IPI:IPI00118237 RefSeq:NP_444388.2
UniGene:Mm.295499 ProteinModelPortal:Q99N96 SMR:Q99N96
STRING:Q99N96 PhosphoSite:Q99N96 PaxDb:Q99N96 PRIDE:Q99N96
Ensembl:ENSMUST00000036437 Ensembl:ENSMUST00000117766 GeneID:94061
KEGG:mmu:94061 UCSC:uc008yfi.1 InParanoid:Q99N96 OMA:IQNGWTD
NextBio:352027 Bgee:Q99N96 CleanEx:MM_MRPL1 Genevestigator:Q99N96
GermOnline:ENSMUSG00000029486 Uniprot:Q99N96
Length = 336
Score = 148 (57.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 52/221 (23%), Positives = 96/221 (43%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKS 201
++ Y+++ AI LLK+ FT + + L +D K + + ++LP
Sbjct: 99 RRIYEVEKAIHLLKKFQVLDFTNPKQGVYLDLTLDMALGKKKTVEPFASVIALPHLFSSE 158
Query: 202 V-KVAVL-AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKI 259
V KVAV A + A+ GA GG DL+++I + D +A P++M ++ L K
Sbjct: 159 VNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVVDFYVAVPEIMGELNPLRKK 218
Query: 260 LGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINF 318
L R P ++ +IP+ +E FK ++ ++ + D D + N
Sbjct: 219 LKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIATLDMPSDQIAANL 276
Query: 319 LAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
A + + ++P G + A++ SS + L +L
Sbjct: 277 QAVINEVCKHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLL 316
>FB|FBgn0037566 [details] [associations]
symbol:mRpL1 "mitochondrial ribosomal protein L1"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687 EMBL:AE014297
GO:GO:0006412 GO:GO:0003723 GO:GO:0005762 GO:GO:0003735
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 CTD:65008 GeneTree:ENSGT00390000003587
OMA:HRETHHP TIGRFAMs:TIGR01170 EMBL:AY051800 RefSeq:NP_524275.1
UniGene:Dm.2468 SMR:Q9VHT5 STRING:Q9VHT5 EnsemblMetazoa:FBtr0081832
GeneID:40980 KEGG:dme:Dmel_CG7494 UCSC:CG7494-RA
FlyBase:FBgn0037566 InParanoid:Q9VHT5 OrthoDB:EOG4RN8RF
GenomeRNAi:40980 NextBio:821575 Uniprot:Q9VHT5
Length = 354
Score = 147 (56.8 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 42/143 (29%), Positives = 73/143 (51%)
Query: 199 GKSVKVAVLAQGE-KFNEAKNAGADLVGGDDLIEQIKGGFM---EFDKLIASPDMMVKVA 254
G+ K+ V +G + EA+ AGA LVGG +LI+ I G + ++ +IA P+++ ++
Sbjct: 155 GEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELV 214
Query: 255 SLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKT------GIVHIPFGKAD 308
+L ++ + PNPK+ T+ TN+ + I +F G + Y A K G++ G D
Sbjct: 215 ALRGLMKRK--FPNPKSETLGTNLAEMIVKFSSG-ISYSAAKDEYQQNFGLITASVGTLD 271
Query: 309 FSEDDLLINFLAAVKSIEANKPK 331
L N ++ I +PK
Sbjct: 272 MDVQKLEENIKFLLQDINTMRPK 294
>RGD|1306850 [details] [associations]
symbol:Mrpl1 "mitochondrial ribosomal protein L1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] InterPro:IPR005879 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 RGD:1306850 GO:GO:0005739
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000003587 InterPro:IPR024663 Pfam:PF13003
TIGRFAMs:TIGR01170 IPI:IPI00764993 Ensembl:ENSRNOT00000002834
UCSC:RGD:1306850 ArrayExpress:F1M9A4 Uniprot:F1M9A4
Length = 322
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/221 (23%), Positives = 95/221 (42%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKS 201
++ Y+++ AI LLK+ FT + + L +D K + + ++LP
Sbjct: 96 RRIYEVEKAIHLLKKFQVLDFTNPKQGVYLDLTLDMALGKKKKVEPFASVIALPHPFSSE 155
Query: 202 V-KVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKI 259
V KVAV + A+ GA GG DL+++I + D +A P++M ++ L K
Sbjct: 156 VNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVVDFYVAVPEIMGELNPLRKK 215
Query: 260 LGPRGLMPNPKAGTVTTNIPQAIEEFKKG-KVEYRADKTGIVHIPFGKADFSEDDLLINF 318
L R P ++ +IP+ +E FK ++ ++ + D D L N
Sbjct: 216 LKKR--FPKATRNSIGRDIPKMLELFKTAHEIMVDEERQNFLSTKIATLDMPSDQLAANL 273
Query: 319 LAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
A + + ++P G + A++ SS + L +L
Sbjct: 274 QAVINEVCRHRPLNL-GPFVVRAFLRSSTSEGLLLKTDSLL 313
>ASPGD|ASPL0000057044 [details] [associations]
symbol:AN1122 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:BN001308
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
EnsemblFungi:CADANIAT00001506 Uniprot:C8VTC4
Length = 217
Score = 131 (51.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 52/196 (26%), Positives = 91/196 (46%)
Query: 167 FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVG 225
F ET E L N DP+ D++ T+ LP + + VL + AK+ G D +
Sbjct: 28 FLETVELQIGLKNYDPQ-RDKRFSGTIKLPTVPRPGMTICVLGDQHDLDRAKHHGIDAMS 86
Query: 226 GDDLIEQ------IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT-VTTNI 278
DDL + IK ++D +AS D ++K + ++LGP GL K T V+ N
Sbjct: 87 ADDLKKLNKNKKLIKKLARKYDAFLAS-DGLIK--QIPRLLGP-GLSKAGKFPTPVSHNE 142
Query: 279 PQAIE-EFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVY 337
A + K ++++ K + + G ++++L+ N + A+ + + KG + V
Sbjct: 143 DMANKVNDVKSTIKFQLKKVLCLGVAVGNVGMTQEELVANIMLAINYLVSLLKKGWQNV- 201
Query: 338 WKSAYICSSMGPSIRL 353
S I ++M P R+
Sbjct: 202 -GSLVIKATMSPPRRV 216
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 133 RSKRFLEIQNLREGKKEYD 151
+ + FLE L+ G K YD
Sbjct: 24 KKRNFLETVELQIGLKNYD 42
>UNIPROTKB|G4MTC2 [details] [associations]
symbol:MGG_04696 "Ribosomal protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0043581 EMBL:CM001232 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 RefSeq:XP_003713675.1 ProteinModelPortal:G4MTC2
SMR:G4MTC2 EnsemblFungi:MGG_04696T0 GeneID:2678194
KEGG:mgr:MGG_04696 Uniprot:G4MTC2
Length = 217
Score = 135 (52.6 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 57/212 (26%), Positives = 98/212 (46%)
Query: 158 LLKQMSSTK---FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 213
LL +TK F ET E L N DP+ D++ T+ LP ++ + +L
Sbjct: 16 LLDYSLNTKKRNFLETVELQIGLKNYDPQ-RDKRFSGTIKLPVVPRPNMAICILGDQHDL 74
Query: 214 NEAKNAGADLVGGDDLIEQ------IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
+ AK+ G D + DDL + IK ++D IAS D ++K + ++LGP GL
Sbjct: 75 DRAKHGGIDSMSADDLKKLNKNKKLIKKLARKYDAFIAS-DTLIK--QIPRLLGP-GLS- 129
Query: 268 NPKAGTVTTNIPQA------IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
KAG T + A + E K ++++ K + + G + +++ L+ N + A
Sbjct: 130 --KAGKFPTPVSHADDLSGKVTEVKS-TIKFQLKKVLCMGVAVGNVEMTQEQLVGNIMLA 186
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ + + KG + V S I ++M P R+
Sbjct: 187 INYLVSLLKKGWQNV--GSLTIKATMSPPKRI 216
>CGD|CAL0000752 [details] [associations]
symbol:orf19.5698 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 CGD:CAL0000752 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
EMBL:AACQ01000261 RefSeq:XP_710527.1 ProteinModelPortal:Q59LA1
STRING:Q59LA1 GeneID:3647879 KEGG:cal:CaO19.5698 Uniprot:Q59LA1
Length = 269
Score = 138 (53.6 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 48/229 (20%), Positives = 96/229 (41%)
Query: 136 RFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLP 195
+F + N + + A+++L+ + K + + + + + V +P
Sbjct: 47 KFNALDNPIDHPLHMPIAKALNILRSLEVGKPADKTTISCNIYVRQEQGAAPISGKVDIP 106
Query: 196 KGTGKSVKVAVLA-QGEKFNEAKNAGADLVGGDDLIEQIKGGFME---FDKLIASPDMMV 251
+ K V Q E K AG + GG +L+++ + F A+ +M
Sbjct: 107 FPVQRKTKPVVFTTQQPVIEELKKAGIETFGGRELLDKFINQELTPDMFTHAFATQEMAP 166
Query: 252 KVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSE 311
+ S+ +ILG GL P K GT+T ++ ++ + +++ K + P G FS+
Sbjct: 167 HLKSVARILGRAGLQPTAKKGTITDDVNTILDVMRSFQIK---QKENHISFPVGNCTFSD 223
Query: 312 DDLLINFLAA---VKS-IEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 356
++ N A + S I+AN K + Y YI ++ P + ++ K
Sbjct: 224 SQIMSNLKAISDEIHSKIDANTTKKTRLGY---CYIGTANSPGLVIDFK 269
>DICTYBASE|DDB_G0276871 [details] [associations]
symbol:rpl10a "S60 ribosomal protein L10a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 dictyBase:DDB_G0276871 Prosite:PS01199
GO:GO:0005615 GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000019 GO:GO:0015934 SUPFAM:SSF56808
KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_642967.1 HSSP:P49626 ProteinModelPortal:Q86L05
STRING:Q86L05 PRIDE:Q86L05 EnsemblProtists:DDB0229949
GeneID:8620839 KEGG:ddi:DDB_G0276871 OMA:ITNDSRE
ProtClustDB:PTZ00029 Uniprot:Q86L05
Length = 217
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/215 (24%), Positives = 99/215 (46%)
Query: 152 LKTAIS-LLKQMSSTK--FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
+++ +S L K+ +K F ET E L N D K D++ + + T + V V
Sbjct: 9 VRSIVSQLFKEAQESKRGFLETVELQINLKNYDTK-KDKRFSGQIKIGTVTKPKLSVCVF 67
Query: 208 AQGEKFNEAKNAGADLVG-------GDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKIL 260
A + +EA GA+ + G + IK ++D +AS ++ +V K+L
Sbjct: 68 ADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVP---KLL 124
Query: 261 GPRGLMPNPKAGTVTTNIPQAIEEFK--KGKVEYRADKTGIVHIPFGKADFSEDDLLINF 318
GP GL K T+ T+ + K V+++ K + + G + +E ++ N
Sbjct: 125 GP-GLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNI 183
Query: 319 LAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ ++ + + KG + + K+ Y+ +SMGPS R+
Sbjct: 184 IQSINFLVSLLKKGWQNI--KTLYVKTSMGPSHRV 216
>CGD|CAL0005037 [details] [associations]
symbol:RPL10A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 CGD:CAL0005037 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000155 EMBL:AACQ01000154
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AJ011417 RefSeq:XP_712505.1
RefSeq:XP_712535.1 ProteinModelPortal:Q9UVJ4 SMR:Q9UVJ4
STRING:Q9UVJ4 GeneID:3645843 GeneID:3645868 KEGG:cal:CaO19.10969
KEGG:cal:CaO19.3465 Uniprot:Q9UVJ4
Length = 217
Score = 131 (51.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/207 (25%), Positives = 92/207 (44%)
Query: 158 LLKQMSSTK---FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 213
LL+ + TK F ET E L N DP+ D++ T+ LP+ ++ + +
Sbjct: 16 LLEYSTETKKRNFLETVELQVGLKNYDPQ-RDKRFSGTLKLPQVPRPNMTICIFGDAFDV 74
Query: 214 NEAKNAGADLVGGDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLM 266
+ AK+ G D + DDL + IK +++ IAS ++ ++ L G L G
Sbjct: 75 DRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIPRLLGPTLSKAGKF 134
Query: 267 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIE 326
P P + ++ + + K ++++ K + + G D ED L+ + A +
Sbjct: 135 PTPVSHN--DDLYSKVTDVKS-TIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLV 191
Query: 327 ANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ K + V S I S+MGPS R+
Sbjct: 192 SLLKKNWQNV--GSLVIKSTMGPSFRI 216
>UNIPROTKB|H0Y8N7 [details] [associations]
symbol:MRPL1 "39S ribosomal protein L1, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR005879 InterPro:IPR016095 InterPro:IPR023674
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.40.50.790 InterPro:IPR024663
Pfam:PF13003 TIGRFAMs:TIGR01170 EMBL:AC112225 EMBL:AC114801
HGNC:HGNC:14275 Ensembl:ENST00000502384 Uniprot:H0Y8N7
Length = 231
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/154 (27%), Positives = 74/154 (48%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEA-HFRLNID----PKYNDQQLRATVSLPKGTGKSV-K 203
Y+++ A+ LLK+ FT ++ + L +D K N + + +SLP + K
Sbjct: 51 YEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKKKNVEPFTSVLSLPYPFASEINK 110
Query: 204 VAVLAQG-EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGP 262
VAV + + A+ GA GG LI++I + D +A P++M ++ L K L
Sbjct: 111 VAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMPELNRLRKKLNK 170
Query: 263 RGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADK 296
+ P ++ +IP+ +E FK G E + D+
Sbjct: 171 K--YPKLSRNSIGRDIPKMLELFKNGH-EIKVDE 201
>SGD|S000006141 [details] [associations]
symbol:RPL1A "Ribosomal 60S subunit protein L1A" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000006141
Prosite:PS01199 GO:GO:0003723 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 RefSeq:NP_011380.3 GeneID:852742
KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDBsum:1K5Y PDBsum:1S1I
PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDB:2NOQ PDBsum:2NOQ
EMBL:X70985 EMBL:Z73576 PIR:S53893 RefSeq:NP_015104.1
ProteinModelPortal:P0CX43 SMR:P0CX43 EnsemblFungi:YGL135W
EnsemblFungi:YPL220W GeneID:855881 KEGG:sce:YPL220W CYGD:YPL220w
EvolutionaryTrace:P0CX43 NextBio:972159 ArrayExpress:P0CX43
GermOnline:YPL220W Uniprot:P0CX43
Length = 217
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 158 LLKQMSSTK---FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 213
LLK + TK F ET E L N DP+ D++ ++ LP ++ + +
Sbjct: 16 LLKYSNETKKRNFLETVELQVGLKNYDPQ-RDKRFSGSLKLPNCPRPNMSICIFGDAFDV 74
Query: 214 NEAKNAGADLVGGDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLM 266
+ AK+ G D + DDL + IK +++ IAS ++ +V L G L G
Sbjct: 75 DRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKF 134
Query: 267 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIE 326
P P + ++ + + + ++++ K + + G + ED L+ L +V
Sbjct: 135 PTPVSHN--DDLYGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFV 191
Query: 327 ANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ K + V S + SSMGP+ RL
Sbjct: 192 SLLKKNWQNV--GSLVVKSSMGPAFRL 216
>SGD|S000003103 [details] [associations]
symbol:RPL1B "Ribosomal 60S subunit protein L1B" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000003103
Prosite:PS01199 EMBL:BK006941 GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 EMBL:X92670 RefSeq:NP_011380.3
GeneID:852742 KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
GeneTree:ENSGT00390000008767 PIR:S53893 RefSeq:NP_015104.1
EnsemblFungi:YGL135W EnsemblFungi:YPL220W GeneID:855881
KEGG:sce:YPL220W NextBio:972159 EMBL:X70986 EMBL:Z72657
ProteinModelPortal:P0CX44 SMR:P0CX44 CYGD:YGL135w
ArrayExpress:P0CX44 GermOnline:YGL135W Uniprot:P0CX44
Length = 217
Score = 124 (48.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/207 (25%), Positives = 91/207 (43%)
Query: 158 LLKQMSSTK---FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKF 213
LLK + TK F ET E L N DP+ D++ ++ LP ++ + +
Sbjct: 16 LLKYSNETKKRNFLETVELQVGLKNYDPQ-RDKRFSGSLKLPNCPRPNMSICIFGDAFDV 74
Query: 214 NEAKNAGADLVGGDDLIEQ------IKGGFMEFDKLIASPDMMVKVASL-GKILGPRGLM 266
+ AK+ G D + DDL + IK +++ IAS ++ +V L G L G
Sbjct: 75 DRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRLLGPQLSKAGKF 134
Query: 267 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIE 326
P P + ++ + + + ++++ K + + G + ED L+ L +V
Sbjct: 135 PTPVSHN--DDLYGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFV 191
Query: 327 ANKPKGAKGVYWKSAYICSSMGPSIRL 353
+ K + V S + SSMGP+ RL
Sbjct: 192 SLLKKNWQNV--GSLVVKSSMGPAFRL 216
>ZFIN|ZDB-GENE-030131-2025 [details] [associations]
symbol:rpl10a "ribosomal protein L10a"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
ZFIN:ZDB-GENE-030131-2025 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
CTD:4736 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:BC059454
EMBL:BC071510 IPI:IPI00500253 RefSeq:NP_955930.1 UniGene:Dr.26808
ProteinModelPortal:Q6PC69 STRING:Q6PC69 PRIDE:Q6PC69
Ensembl:ENSDART00000062983 GeneID:323305 KEGG:dre:323305
InParanoid:Q6PC69 NextBio:20808180 ArrayExpress:Q6PC69 Bgee:Q6PC69
Uniprot:Q6PC69
Length = 216
Score = 122 (48.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 56/214 (26%), Positives = 95/214 (44%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLA 208
Y+ + + KF ET E L N DP+ D++ TV L V VL
Sbjct: 10 YEAVKEVQAGSRRKKRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKTTPRPKFSVCVLG 68
Query: 209 QGEKFNEAKNAGA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGP 262
+ +EAK A D+ L + +K ++D +AS + ++K + +ILGP
Sbjct: 69 DQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP 125
Query: 263 RGLMPNPKAGTVTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFL 319
GL K ++ T N+ ++E K ++++ K + + G SE++L+ N
Sbjct: 126 -GLNKAGKFPSLLTHNENLGTKVDEVKS-TIKFQMKKVLCLAVAVGHVKMSEEELVYNIH 183
Query: 320 AAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
AV + + K + V ++ YI S+MG RL
Sbjct: 184 LAVNFLVSLLKKNWQNV--RALYIKSTMGKPQRL 215
>UNIPROTKB|Q5E9E6 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:GPRNKMP GeneTree:ENSGT00390000008767 EMBL:BT020974
EMBL:BC102653 IPI:IPI00710091 RefSeq:NP_001015647.1
UniGene:Bt.49789 UniGene:Bt.63495 ProteinModelPortal:Q5E9E6
SMR:Q5E9E6 STRING:Q5E9E6 PRIDE:Q5E9E6 Ensembl:ENSBTAT00000025963
GeneID:533310 KEGG:bta:533310 CTD:4736 HOVERGEN:HBG055239
InParanoid:Q5E9E6 OrthoDB:EOG4HQDKC NextBio:20875996 Uniprot:Q5E9E6
Length = 217
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>UNIPROTKB|E2R9V0 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 EMBL:AAEX03008269
ProteinModelPortal:E2R9V0 PRIDE:E2R9V0 Ensembl:ENSCAFT00000002038
NextBio:20850823 Uniprot:E2R9V0
Length = 217
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>UNIPROTKB|P62906 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0005739 Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0009653
SUPFAM:SSF56808 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
EMBL:AL022721 KO:K02865 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG CTD:4736
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:U12404 EMBL:AB082926
EMBL:BT020040 EMBL:BT020041 EMBL:AK313181 EMBL:BC006791
EMBL:BC011366 EMBL:BC070216 IPI:IPI00412579 RefSeq:NP_009035.3
UniGene:Hs.148340 UniGene:Hs.546269 ProteinModelPortal:P62906
SMR:P62906 IntAct:P62906 MINT:MINT-4999991 STRING:P62906
PhosphoSite:P62906 DMDM:51702773 SWISS-2DPAGE:P62906 PaxDb:P62906
PRIDE:P62906 DNASU:4736 Ensembl:ENST00000322203 GeneID:4736
KEGG:hsa:4736 UCSC:uc003okp.1 GeneCards:GC06P035582 HGNC:HGNC:10299
neXtProt:NX_P62906 PharmGKB:PA34661 InParanoid:P62906
PhylomeDB:P62906 ChiTaRS:RPL10A GenomeRNAi:4736 NextBio:18266
Bgee:P62906 CleanEx:HS_RPL10A Genevestigator:P62906
GermOnline:ENSG00000198755 Uniprot:P62906
Length = 217
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>RGD|620497 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO;TAS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 RGD:620497 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:GPRNKMP
GeneTree:ENSGT00390000008767 CTD:4736 HOVERGEN:HBG055239
OrthoDB:EOG4HQDKC EMBL:X93352 EMBL:BC058468 IPI:IPI00339012
PIR:JC4677 RefSeq:NP_112327.1 UniGene:Rn.161731 UniGene:Rn.2262
ProteinModelPortal:P62907 SMR:P62907 IntAct:P62907 STRING:P62907
PhosphoSite:P62907 PRIDE:P62907 Ensembl:ENSRNOT00000000603
GeneID:81729 KEGG:rno:81729 UCSC:RGD:620497 InParanoid:P62907
NextBio:615392 Genevestigator:P62907 GermOnline:ENSRNOG00000000505
Uniprot:P62907
Length = 217
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>GENEDB_PFALCIPARUM|PF14_0391 [details] [associations]
symbol:PF14_0391 "ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865
GO:GO:0022625 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP ProtClustDB:PTZ00029
RefSeq:XP_001348565.1 ProteinModelPortal:Q8IL58 MINT:MINT-1664387
PRIDE:Q8IL58 EnsemblProtists:PF14_0391:mRNA GeneID:811973
KEGG:pfa:PF14_0391 EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 53/214 (24%), Positives = 94/214 (43%)
Query: 152 LKTAISLL---KQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLA 208
LK AIS + + KF ET E L D++ TV L K +KV +L
Sbjct: 9 LKKAISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKKLKVCILG 68
Query: 209 QGEKFNEAKNAGADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGP 262
EA+ D + + + + K + ++D +AS V + + K+LGP
Sbjct: 69 DAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLAS---QVILPQIPKLLGP 125
Query: 263 RGLMPNPKAGTVTTN---IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFL 319
GL K ++ T+ I I E K ++++ K + +P G A+ E++L N +
Sbjct: 126 -GLNKAGKFPSLITHNDKINDKILELKSS-IKFQLKKVLCMGVPVGHANLKEEELRSNIV 183
Query: 320 AAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
A+ + + K + + ++ +I S+MG R+
Sbjct: 184 HAINFLVSLLKKNWQNI--RTLHIKSTMGKPQRI 215
>UNIPROTKB|Q8IL58 [details] [associations]
symbol:PF14_0391 "60S ribosomal protein L1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
OMA:GPRNKMP ProtClustDB:PTZ00029 RefSeq:XP_001348565.1
ProteinModelPortal:Q8IL58 MINT:MINT-1664387 PRIDE:Q8IL58
EnsemblProtists:PF14_0391:mRNA GeneID:811973 KEGG:pfa:PF14_0391
EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 116 (45.9 bits), Expect = 0.00010, P = 0.00010
Identities = 53/214 (24%), Positives = 94/214 (43%)
Query: 152 LKTAISLL---KQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLA 208
LK AIS + + KF ET E L D++ TV L K +KV +L
Sbjct: 9 LKKAISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKKLKVCILG 68
Query: 209 QGEKFNEAKNAGADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGP 262
EA+ D + + + + K + ++D +AS V + + K+LGP
Sbjct: 69 DAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLAS---QVILPQIPKLLGP 125
Query: 263 RGLMPNPKAGTVTTN---IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFL 319
GL K ++ T+ I I E K ++++ K + +P G A+ E++L N +
Sbjct: 126 -GLNKAGKFPSLITHNDKINDKILELKSS-IKFQLKKVLCMGVPVGHANLKEEELRSNIV 183
Query: 320 AAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
A+ + + K + + ++ +I S+MG R+
Sbjct: 184 HAINFLVSLLKKNWQNI--RTLHIKSTMGKPQRI 215
>FB|FBgn0036213 [details] [associations]
symbol:RpL10Ab "Ribosomal protein L10Ab" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:AE014296 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000022 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP EMBL:BT014654 RefSeq:NP_648514.1
UniGene:Dm.23143 ProteinModelPortal:Q9VTP4 SMR:Q9VTP4 IntAct:Q9VTP4
MINT:MINT-1551463 STRING:Q9VTP4 PaxDb:Q9VTP4 PRIDE:Q9VTP4
EnsemblMetazoa:FBtr0076032 GeneID:39338 KEGG:dme:Dmel_CG7283
CTD:39338 FlyBase:FBgn0036213 GeneTree:ENSGT00390000008767
InParanoid:Q9VTP4 OrthoDB:EOG4T76KC PhylomeDB:Q9VTP4
ChiTaRS:RpL10Ab GenomeRNAi:39338 NextBio:813157 Bgee:Q9VTP4
GermOnline:CG7283 Uniprot:Q9VTP4
Length = 217
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 57/206 (27%), Positives = 88/206 (42%)
Query: 158 LLKQMSSTK--FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
LL+ + K F ET E L N DP+ D++ TV L +KV +L + +
Sbjct: 17 LLEASAKKKRGFLETVELQIGLKNYDPQ-KDKRFSGTVKLKHIPRPKMKVCILGDQQHCD 75
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPN-PKAGT 273
EAK D + + L + K + KL S D + SL K + PR L P KAG
Sbjct: 76 EAKANNVDFMDAEALKKLNKNKKL-VKKLAKSYDAFLASESLIKQI-PRLLGPGLNKAGK 133
Query: 274 VTTNIPQA------IEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
+ IEE K ++++ K + + G D+L N ++ + +
Sbjct: 134 FPALLSHQESMIGKIEEVKS-TIKFQMKKVLCLSVAVGHVGMKSDELAQNVNLSINFLVS 192
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRL 353
K + V +S ++ SSMGP RL
Sbjct: 193 LLKKNWQNV--RSLHVKSSMGPPQRL 216
>UNIPROTKB|E1BKD0 [details] [associations]
symbol:E1BKD0 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02006245
IPI:IPI00730587 Ensembl:ENSBTAT00000002846 OMA:MEDEAIA
NextBio:20928490 Uniprot:E1BKD0
Length = 217
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 G---ADLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHVDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNGNMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMG 348
K + + ++ YI S+MG
Sbjct: 196 KNWQNI--RALYIKSTMG 211
>TAIR|locus:2176337 [details] [associations]
symbol:AT5G22440 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AB007651 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 ProtClustDB:CLSN2687446 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 EMBL:AY037253 EMBL:AY077657
EMBL:F19997 IPI:IPI00536065 RefSeq:NP_001078612.1
RefSeq:NP_197636.1 UniGene:At.7367 ProteinModelPortal:P59231
SMR:P59231 STRING:P59231 PRIDE:P59231 EnsemblPlants:AT5G22440.1
EnsemblPlants:AT5G22440.2 GeneID:832305 KEGG:ath:AT5G22440
GeneFarm:211 TAIR:At5g22440 InParanoid:P59231 OMA:GPRNKMP
PhylomeDB:P59231 Genevestigator:P59231 GermOnline:AT5G22440
Uniprot:P59231
Length = 217
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 49/212 (23%), Positives = 94/212 (44%)
Query: 152 LKTAISLLKQMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQG 210
+ + I+ K+ FTET E L N DP+ D++ +V LP +K+ +L
Sbjct: 13 ISSIITHCKETKPRNFTETIELQIGLKNYDPQ-KDKRFSGSVKLPHVPRPKMKICMLGDA 71
Query: 211 EKFNEAKNAGADLVGGDDLIEQIKGGFM------EFDKLIASPDMMVKVASLGKILGPRG 264
+ EA+ G + + + L + K + +F +AS + ++K + ++LGP G
Sbjct: 72 QHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLAS-ESVIK--QIPRLLGP-G 127
Query: 265 LMPNPKAGTVTTN---IPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
L K T+ ++ + + E K V+++ K + + G E + N +
Sbjct: 128 LNKAGKFPTLVSHQESLESKVNE-TKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMS 186
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
V + + K + V + Y+ S+MGP R+
Sbjct: 187 VNFLVSLLKKNWQNV--RCLYLKSTMGPPNRV 216
>MGI|MGI:1343877 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 MGI:MGI:1343877 Prosite:PS01199
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC ChiTaRS:RPL10A EMBL:U12403
EMBL:D10916 IPI:IPI00127085 UniGene:Mm.336955 UniGene:Mm.467207
ProteinModelPortal:P53026 SMR:P53026 IntAct:P53026 STRING:P53026
PhosphoSite:P53026 PaxDb:P53026 PRIDE:P53026 InParanoid:P53026
CleanEx:MM_RPL10A Genevestigator:P53026
GermOnline:ENSMUSG00000037805 GermOnline:ENSMUSG00000061631
Uniprot:P53026
Length = 217
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +E K
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDERKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>UNIPROTKB|G3X7N2 [details] [associations]
symbol:G3X7N2 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02002354
Ensembl:ENSBTAT00000039021 OMA:EHIYENI NextBio:20924953
Uniprot:G3X7N2
Length = 217
Score = 111 (44.1 bits), Expect = 0.00040, P = 0.00040
Identities = 53/203 (26%), Positives = 90/203 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET + L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKHRKFLETVKLQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 G---ADLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHTDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ + E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVGEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMGPSIRL 353
K + V ++ YI S+MG RL
Sbjct: 196 KNWQNV--RALYIKSTMGKPQRL 216
>RGD|1566137 [details] [associations]
symbol:RGD1566137 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1566137 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 OMA:VAVGHMK Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
EMBL:AC095904 IPI:IPI00369431 RefSeq:XP_001071067.1
RefSeq:XP_217361.3 Ensembl:ENSRNOT00000044603 GeneID:301299
KEGG:rno:301299 UCSC:RGD:1566137 CTD:301299 NextBio:648511
Uniprot:D4A7Y6
Length = 217
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00052
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLDKKYDGFLAS-ESLIK--QIPRILGP-GLNKAGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D+L+ N AV + +
Sbjct: 137 LLTHNENMVAKVDEVKS-TIKFQMKKLLCLAVAVGHMKMTDDELVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMG 348
K + V ++ YI S+MG
Sbjct: 196 KNWQNV--RALYIKSTMG 211
>RGD|1559639 [details] [associations]
symbol:RGD1559639 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1559639 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00781415 RefSeq:XP_001080284.1 RefSeq:XP_345687.1
Ensembl:ENSRNOT00000059150 GeneID:366656 KEGG:rno:366656
UCSC:RGD:1559639 CTD:366656 NextBio:689802 Uniprot:D3ZBX4
Length = 217
Score = 109 (43.4 bits), Expect = 0.00069, P = 0.00069
Identities = 52/198 (26%), Positives = 88/198 (44%)
Query: 161 QMSSTKFTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNA 219
Q KF ET E L N DP+ D++ TV L V VL + +EAK
Sbjct: 22 QRKRRKFLETVELQISLKNYDPQ-KDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKVV 80
Query: 220 GA---DLVGGDDLIEQ---IKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGT 273
D+ L + +K ++D +AS + ++K + +ILGP GL K +
Sbjct: 81 DIPHMDIEALKKLNKNKKLVKKLAKKYDAFLAS-ESLIK--QIPRILGP-GLNKVGKFPS 136
Query: 274 VTT---NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+ T N+ ++E K ++++ K + + G ++D L+ N AV + +
Sbjct: 137 LMTHNENMVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDKLVYNIHLAVNFLVSLLK 195
Query: 331 KGAKGVYWKSAYICSSMG 348
K + V ++ YI S+MG
Sbjct: 196 KNWQNV--RALYIKSTMG 211
>TAIR|locus:2042087 [details] [associations]
symbol:PGY1 "PIGGYBACK1" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IGI]
[GO:0048569 "post-embryonic organ development" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AC006232 EMBL:AC005824 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
GO:GO:0009955 GO:GO:0048569 eggNOG:COG0081 HOGENOM:HOG000207014
ProtClustDB:CLSN2687446 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AF360146 EMBL:AY056371 EMBL:AY081263
EMBL:BT006262 EMBL:Z27264 IPI:IPI00541952 PIR:A84674
RefSeq:NP_565654.1 RefSeq:NP_850104.1 UniGene:At.19006
ProteinModelPortal:P59230 SMR:P59230 STRING:P59230 PaxDb:P59230
PRIDE:P59230 EnsemblPlants:AT2G27530.1 EnsemblPlants:AT2G27530.2
GeneID:817299 KEGG:ath:AT2G27530 GeneFarm:212 TAIR:At2g27530
InParanoid:P59230 OMA:MSICILG PhylomeDB:P59230
Genevestigator:P59230 GermOnline:AT2G27530 Uniprot:P59230
Length = 216
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 56/212 (26%), Positives = 90/212 (42%)
Query: 152 LKTAISLLKQMSSTK---FTETAEAHFRL-NIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
++ AI+ +K S K F ET E L N DP+ D++ +V LP +K+ +L
Sbjct: 9 VREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQ-KDKRFSGSVKLPHIPRPKMKICML 67
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
+ EA+ G + + L + K + KL S + S+ K + PR L P
Sbjct: 68 GDAQHVEEAEKMGLSNMDVEALKKLNKNKKL-VKKLAKSYHAFLASESVIKQI-PRLLGP 125
Query: 268 N-PKAGTVTTNIP-QAIEEFK----KGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAA 321
KAG T + Q E K K V+++ K + + G E L N +
Sbjct: 126 GLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMS 185
Query: 322 VKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 353
V + + K + V + Y+ S+MGP R+
Sbjct: 186 VNFLVSLLKKNWQNV--RCLYLKSTMGPPQRI 215
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 367 309 0.00079 116 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 607 (65 KB)
Total size of DFA: 196 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.86u 0.09s 23.95t Elapsed: 00:00:01
Total cpu time: 23.87u 0.09s 23.96t Elapsed: 00:00:01
Start: Thu May 9 16:40:20 2013 End: Thu May 9 16:40:21 2013