BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017710
(367 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LY66|RK1_ARATH 50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana
GN=RPL1 PE=1 SV=1
Length = 346
Score = 483 bits (1244), Expect = e-136, Method: Compositional matrix adjust.
Identities = 256/367 (69%), Positives = 287/367 (78%), Gaps = 25/367 (6%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGER-RASK 59
MA C T SSLML YAA QDLTP+ SL SF S+ S L + GG R R
Sbjct: 1 MAACATH-SSLMLAYAAASTRSQDLTPTPSLFSFASSRPNHLSF--PLLLLGGSRDRRCA 57
Query: 60 WLDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATIST-KP 118
+D R + + SAV A+ DL D E+D + TATA + KP
Sbjct: 58 AID----RASNHKF------IVSAVAAEADL---DTEEDLE-------QTATAVLDPPKP 97
Query: 119 KKGKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLN 178
KKGKAAL LKRDRTRSKRFLEIQ LRE KKEYD+ TAISLLKQ ++T+F E+ EAHFRLN
Sbjct: 98 KKGKAALVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLN 157
Query: 179 IDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFM 238
IDPKYNDQQLRATVSLPKGTG++V VAVLAQGEK +EAK+AGAD+VG DDLIEQIKGGFM
Sbjct: 158 IDPKYNDQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFM 217
Query: 239 EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTG 298
EFDKLIASPDMMVKVA LGKILGPRGLMPNPKAGTVT NIPQAIEEFKKGKVE+RADKTG
Sbjct: 218 EFDKLIASPDMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTG 277
Query: 299 IVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
IVHIPFGK +F+E+DLLINFLAAVKS+E NKPKGAKGVYWKSA+ICSSMGPSI+LNI+EM
Sbjct: 278 IVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREM 337
Query: 359 LDYKLPS 365
+D+K P+
Sbjct: 338 IDFKPPT 344
>sp|Q9LE95|RK1_SPIOL 50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea
GN=RPL1 PE=1 SV=1
Length = 352
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 240/366 (65%), Positives = 276/366 (75%), Gaps = 15/366 (4%)
Query: 1 MATCGTTPSSLMLTYAATPVHPQDLTPSLSLLSFKPSKTAAFSLCTNLSVRGGERRASKW 60
MAT P SL L YA++ Q PS FKP + SLC L++ ER KW
Sbjct: 1 MATAA--PPSLSLCYASSSFQYQQ-DPSFQT-HFKPLLLNS-SLC-RLTLNQRERSCLKW 54
Query: 61 LDLYPLRQNKNGLPGHMLAAASAVEADTDLATDDVEDDTQGGTEGATATATATISTKPKK 120
+D +Q+ + +LAA +A D+ + + AT TKPKK
Sbjct: 55 VDFTSQKQSPKSVSFRVLAAVAAEAEVADMEEE---------EGESGGVATLPSPTKPKK 105
Query: 121 GKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNID 180
GKAALPLK DRTRSKRFLEIQ LRE K+EYDLKTA+SL+KQMSSTKF ETAEAHFRLNID
Sbjct: 106 GKAALPLKSDRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNID 165
Query: 181 PKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEF 240
PKYNDQQLRATVSLPKGTGK+VK+AVLAQG+K +EAK AGAD+VGG++LIEQIKGGFM+F
Sbjct: 166 PKYNDQQLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDF 225
Query: 241 DKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIV 300
DKLIA+ DMM KVASLG+ILGPRGLMP PKAGTVT N+ QA+EEFKKGKVE+R DKTGIV
Sbjct: 226 DKLIATSDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIV 285
Query: 301 HIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
HIPFGK +F E+DLLIN A +KS+E NKP GAKGVYWKSA+I SSMGPSIRLNI+EMLD
Sbjct: 286 HIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLD 345
Query: 361 YKLPSN 366
YK PSN
Sbjct: 346 YKPPSN 351
>sp|B0JNQ5|RL1_MICAN 50S ribosomal protein L1 OS=Microcystis aeruginosa (strain
NIES-843) GN=rplA PE=3 SV=1
Length = 237
Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 179/230 (77%), Gaps = 1/230 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+R + Q E K Y+ A++LLK++++ KF ETAEAH RL IDPKY DQQLR TVS
Sbjct: 6 SRRLRDAQAKVENKA-YEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVS 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG++V+VAV+ +GEK EA NAGAD+VG ++LIE+I G M+F+ LIA+PDMM KV
Sbjct: 65 LPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LG+ LGPRGLMP+PK GTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 125 AKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAED 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL+N A ++++ N+P GAKG YW++ Y+ SSMGPSI+++I + D KL
Sbjct: 185 LLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234
>sp|Q3MA18|RL1_ANAVT 50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplA PE=3 SV=1
Length = 238
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+R E+Q E +EY A+SLLK+ ++ KF E AEAH RL IDPKY DQQLR TV+
Sbjct: 6 SRRLRELQAKVE-DREYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRTTVA 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG+ V+VAV+A+GEK EA NAGAD+ G ++LI++I+ G M+FDKLIA+PD+M +V
Sbjct: 65 LPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVMPQV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LGK+LGPRGLMP+PK GTVT +I AI EFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 125 AKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPED 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL
Sbjct: 185 LLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
>sp|P49208|RK1_PEA 50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum
GN=RPL1 PE=2 SV=1
Length = 208
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/167 (84%), Positives = 150/167 (89%)
Query: 119 KKGKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLN 178
++GK LK DR RSKRFLEIQ LRE KKEYDLKTAISL+K+ + TKF ET EAHFRLN
Sbjct: 42 RQGKLHWRLKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRLN 101
Query: 179 IDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFM 238
IDPKYNDQQLRATVSLPKGTGK +KVAVL QGE+F+EAKNAGADLVGG+DLIEQIKGGFM
Sbjct: 102 IDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFM 161
Query: 239 EFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEF 285
EFDKLIASPDMM KVASLGKILGPRGLMPNPKAGTVT NIPQAI EF
Sbjct: 162 EFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEF 208
>sp|Q8YLJ7|RL1_NOSS1 50S ribosomal protein L1 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplA PE=3 SV=1
Length = 238
Score = 288 bits (736), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/230 (59%), Positives = 180/230 (78%), Gaps = 1/230 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+R E+Q E +EY A+ LLK+ ++ KF E AEAH RL IDPKY DQQLR TV+
Sbjct: 6 SRRLRELQAKVE-DREYGPLDALGLLKETATAKFGEAAEAHIRLGIDPKYTDQQLRTTVA 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG+ V+VAV+A+GEK EA NAGAD+VG ++LI++I+ G M+FDKLIA+PD+M +V
Sbjct: 65 LPKGTGQIVRVAVIARGEKVTEASNAGADVVGSEELIDEIQKGRMDFDKLIATPDVMPQV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LGK+LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 125 AKLGKMLGPRGLMPSPKGGTVTFDVASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPED 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL+N A ++I+ N+P GAKG YW++ Y+ ++MGPSIR++I + DYKL
Sbjct: 185 LLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234
>sp|Q8DM27|RL1_THEEB 50S ribosomal protein L1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplA PE=3 SV=1
Length = 237
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 183/233 (78%), Gaps = 1/233 (0%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
R S+R E+ E + L+ A+ LLK+ ++ KF E+AEAH RL IDPKY DQQLR
Sbjct: 2 RKLSRRLRELYAKVEDRPYAPLE-ALQLLKETATAKFPESAEAHIRLGIDPKYTDQQLRT 60
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
TV+LPKGTG++++VAV+A+GEK EA AGAD+VG ++LI++I+ G M+FD LIA+PDMM
Sbjct: 61 TVALPKGTGQTIRVAVIARGEKVTEASAAGADVVGSEELIDEIQKGRMDFDLLIATPDMM 120
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+VA +G+ILGPRGLMP+PKAGTVT ++PQAI+EFK GKVE+RAD++GIVH+ FGKA FS
Sbjct: 121 PQVAKVGRILGPRGLMPSPKAGTVTFDLPQAIQEFKAGKVEFRADRSGIVHVLFGKASFS 180
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
+DLL+N A +SI+ N+P GAKG YW+S Y+ ++MGPSI+++I + + KL
Sbjct: 181 AEDLLVNLKALQESIDRNRPSGAKGRYWRSVYVAATMGPSIQVDINALRELKL 233
>sp|O78413|RK1_GUITH 50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1
PE=3 SV=1
Length = 234
Score = 284 bits (727), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/227 (59%), Positives = 174/227 (76%), Gaps = 1/227 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKR E++N E K Y A++LLK ++ KF E+AEAH L +D KY DQQLR T+
Sbjct: 5 SKRISEVRNKIENK-PYKAIEALNLLKDTATAKFVESAEAHIALKLDTKYADQQLRTTLV 63
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTGK +++AV+A+GEK EA NAGADL G DL++ I G ++FD+LIA+PDMM +
Sbjct: 64 LPKGTGKKIRIAVIAEGEKATEAINAGADLAGSTDLVQDIMKGMLDFDRLIATPDMMPLI 123
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LGK+LGPRGLMP+PK+GTVT+++ AIEEFKKGK+EYRADK+GIVHI FGK +FS +D
Sbjct: 124 AKLGKVLGPRGLMPSPKSGTVTSDVKSAIEEFKKGKLEYRADKSGIVHISFGKTNFSVND 183
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
LL+N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 184 LLLNLEAVQESIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRD 230
>sp|Q31QK4|RL1_SYNE7 50S ribosomal protein L1 OS=Synechococcus elongatus (strain PCC
7942) GN=rplA PE=3 SV=1
Length = 237
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/233 (57%), Positives = 179/233 (76%), Gaps = 1/233 (0%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
R S+R E+Q E + Y+ A++LLK+ ++ KF E+AEAH RL IDPKY DQQLR
Sbjct: 3 RKVSRRLQELQKKVE-DRAYEPLAALNLLKETATAKFPESAEAHIRLGIDPKYTDQQLRT 61
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
TV+LPKGTG++++VAV+A+GEK EAK AGAD+ G ++LIE+I GF++FD LIA+PD+M
Sbjct: 62 TVALPKGTGQTIRVAVIARGEKVAEAKAAGADIAGSEELIEEISKGFLDFDLLIATPDVM 121
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+VA LG+ LGPRGLMP+PK GTVT ++ QAI EFK GK+E+RAD+TGIVH+ FGKA FS
Sbjct: 122 PQVAKLGRQLGPRGLMPSPKGGTVTFDLEQAINEFKAGKLEFRADRTGIVHVLFGKASFS 181
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
DDLL N A ++I+ N+P GAKG YW+S YI ++MGP+I ++I + D KL
Sbjct: 182 ADDLLANLKALQETIDRNRPSGAKGRYWRSVYISATMGPAIEVDINALRDLKL 234
>sp|B7KIR7|RL1_CYAP7 50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 7424)
GN=rplA PE=3 SV=1
Length = 238
Score = 282 bits (721), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 128/230 (55%), Positives = 179/230 (77%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+RF E + K Y+ A++LLK+ ++ KF ETAE H RL IDPKY DQQLR TV+
Sbjct: 6 SRRFKEALAKVDQDKAYEPLEALNLLKETATAKFDETAEVHVRLGIDPKYTDQQLRTTVT 65
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
PKGTG++V+VAV+A+GEK EA +AGAD+VG ++LI++I+ G M+F+ LIA+PDMM KV
Sbjct: 66 FPKGTGQTVRVAVIARGEKVQEASSAGADIVGSEELIDEIQNGMMDFEVLIATPDMMPKV 125
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LG++LGPRGLMP+PK GTVTT++ AI+EFK GK E+RAD+TGIVH+ FGKA F+ +D
Sbjct: 126 AKLGRLLGPRGLMPSPKGGTVTTDLAAAIQEFKAGKQEFRADRTGIVHVMFGKASFTAED 185
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL+N A ++I+ N+P GAKG YW++ ++ +SMGPSI++++ + D K+
Sbjct: 186 LLVNLKALQETIDRNRPSGAKGRYWRTVFVSASMGPSIQVDVNSLRDLKV 235
>sp|Q5N3N8|RL1_SYNP6 50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rplA PE=3 SV=1
Length = 237
Score = 281 bits (719), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 179/233 (76%), Gaps = 1/233 (0%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
R S+R E+Q E + Y+ A++LLK+ ++ KF E+AEAH RL IDPKY DQQLR
Sbjct: 3 RKVSRRLQELQKKVE-DRAYEPLAALNLLKETATAKFPESAEAHIRLGIDPKYTDQQLRT 61
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
TV+LPKGTG++++VAV+A+GEK EAK AGAD+ G ++LIE+I GF++FD LIA+PD+M
Sbjct: 62 TVALPKGTGQTIRVAVIARGEKVAEAKAAGADIAGSEELIEEISKGFLDFDLLIATPDVM 121
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+VA LG+ LGPRGLMP+PK GTVT ++ QA+ EFK GK+E+RAD+TGIVH+ FGKA FS
Sbjct: 122 PQVAKLGRQLGPRGLMPSPKGGTVTFDLEQAVNEFKAGKLEFRADRTGIVHVLFGKASFS 181
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
DDLL N A ++I+ N+P GAKG YW+S YI ++MGP+I ++I + D KL
Sbjct: 182 ADDLLANLKALQETIDRNRPSGAKGRYWRSVYISATMGPAIEVDINALRDPKL 234
>sp|B7JWT7|RL1_CYAP8 50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801)
GN=rplA PE=3 SV=1
Length = 238
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 133/230 (57%), Positives = 174/230 (75%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKRF E + + Y A+ LLK+ ++ KF E+AEAH RL IDPKY DQQLR TVS
Sbjct: 6 SKRFKEALAKVDQNQTYAPLEALQLLKETATAKFNESAEAHIRLGIDPKYTDQQLRTTVS 65
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG+ V+VAV+A+GEK EA NAGAD+VG ++LIE+I G M+F+ LIA+PDMM KV
Sbjct: 66 LPKGTGQEVRVAVIARGEKVQEANNAGADIVGSEELIEEIFKGMMDFEVLIATPDMMPKV 125
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LG++LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVH+ FGKA F+ +D
Sbjct: 126 AKLGRLLGPRGLMPSPKGGTVTADLTNAITEFKAGKLEFRADRTGIVHVMFGKASFTPED 185
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL N A ++++ N+P GAKG YW+S ++ +SMGPSI ++I + D KL
Sbjct: 186 LLANLKALQETVDRNRPSGAKGRYWRSVFVSASMGPSIAVDINALRDLKL 235
>sp|P36236|RL1_SYNY3 50S ribosomal protein L1 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplA PE=3 SV=1
Length = 238
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 130/219 (59%), Positives = 169/219 (77%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y A+ LLK+ ++ KF ETAEAH RL IDPKY+DQQ+R TVSLPKGTG++V+VAVL
Sbjct: 20 KLYSPLEAMELLKETATAKFDETAEAHIRLGIDPKYSDQQIRTTVSLPKGTGQTVRVAVL 79
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+GEK EA +AGAD+ G ++LIE+I+ G M+FD LIA+PDMM K+A LGK LGPRGLMP
Sbjct: 80 ARGEKVKEATDAGADIAGSEELIEEIQKGMMDFDVLIATPDMMPKIARLGKQLGPRGLMP 139
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
+PK GTVT ++ A+ EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+
Sbjct: 140 SPKGGTVTADLAAAVNEFKAGKLEFRADRTGIVHVMFGKASFSADDLLANLKALQETIDR 199
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSN 366
N+P GAKG +W++ ++ SSMGPSI ++I + D K N
Sbjct: 200 NRPSGAKGRFWRTVFVSSSMGPSIPVDINALRDLKFEDN 238
>sp|A5GWK1|RL1_SYNR3 50S ribosomal protein L1 OS=Synechococcus sp. (strain RCC307)
GN=rplA PE=3 SV=1
Length = 235
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 171/227 (75%), Gaps = 1/227 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKRF Q E + Y A+SL+K ++ KF ET EAH RL IDPKY DQQLR TV+
Sbjct: 5 SKRFKAAQATVE-PRAYAPLEAVSLVKANATAKFDETIEAHVRLGIDPKYTDQQLRTTVA 63
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG+S+++AV+ +GEK EAK AGA+LVG ++L++ I GG M+FD LIA+PDMM KV
Sbjct: 64 LPKGTGRSIRIAVITRGEKVAEAKAAGAELVGDEELVDSIAGGQMDFDLLIATPDMMPKV 123
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LG++LGPRGLMPNPK GTVTT++ AI EFK GK+E+RAD++GIVH+ FGKA FS DD
Sbjct: 124 AKLGRVLGPRGLMPNPKTGTVTTDVTNAINEFKAGKLEFRADRSGIVHVQFGKASFSADD 183
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
LL N + ++++ NKP GAKG YWKS YI S+MGPS+ ++ + D
Sbjct: 184 LLENLKSVQETVDRNKPSGAKGRYWKSLYITSTMGPSVEVDFSALQD 230
>sp|B0CAD0|RL1_ACAM1 50S ribosomal protein L1 OS=Acaryochloris marina (strain MBIC
11017) GN=rplA PE=3 SV=1
Length = 236
Score = 278 bits (711), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/230 (57%), Positives = 176/230 (76%), Gaps = 1/230 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+R E++ E + Y+ A+ LL + ++ KF E+AEAH RL IDPKY DQQLR TV+
Sbjct: 6 SRRMRELKQQVEDRA-YEPLEALELLCKTATAKFPESAEAHIRLGIDPKYTDQQLRTTVA 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTG+ V++AV+A+GEK EA +AGAD+VG ++LI +I+ G M+FD LIA+PDMM +V
Sbjct: 65 LPKGTGQEVRIAVVARGEKVKEATDAGADVVGSEELITEIQQGRMDFDLLIATPDMMPQV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A +G+ILGPRGLMP+PKAGTVT ++PQAIEEFK GK+E+RAD+TGIVH+ FGKA FS D
Sbjct: 125 AKVGRILGPRGLMPSPKAGTVTFDLPQAIEEFKAGKLEFRADRTGIVHVMFGKAKFSAQD 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
LL N A +I+ N+P GAKG YW+S Y+ ++MGPSI ++I + D L
Sbjct: 185 LLENLKALQDTIDRNRPSGAKGRYWRSLYVSATMGPSIEVDISSLRDLNL 234
>sp|P48125|RK1_CYAPA 50S ribosomal protein L1, cyanelle OS=Cyanophora paradoxa GN=rpl1
PE=3 SV=1
Length = 237
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/236 (56%), Positives = 178/236 (75%), Gaps = 1/236 (0%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
+ RS+R E+ E ++ Y+ AI LLKQ+S+ KF ET E H RL IDPKYNDQQLRA
Sbjct: 2 KKRSRRMQELVGKVE-EQLYEPLEAIQLLKQISTAKFIETVEVHCRLGIDPKYNDQQLRA 60
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
TV+LP GTG++++VAV+ +GEK NEA AGADLVG ++LI++I+ G ++FD LIA+PDMM
Sbjct: 61 TVTLPNGTGQTLRVAVITRGEKINEASTAGADLVGAEELIDEIQNGRLDFDCLIATPDMM 120
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+VA LG++LGPRGLMP+PK GTVT ++ QAI +FK GK+E+R D+TGIVH+ FGKA+FS
Sbjct: 121 PQVAKLGRVLGPRGLMPSPKGGTVTFDLAQAINDFKAGKLEFRNDRTGIVHVLFGKANFS 180
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSN 366
E+ LL N A ++++ N+P G KG YWKS YI S+M PSI ++ + D KL N
Sbjct: 181 EEALLGNLKAVQEAVDRNRPSGVKGKYWKSIYITSTMSPSIEVDYNLLRDLKLTEN 236
>sp|Q6B906|RK1_GRATL 50S ribosomal protein L1, chloroplastic OS=Gracilaria
tenuistipitata var. liui GN=rpl1 PE=3 SV=1
Length = 235
Score = 274 bits (701), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 175/226 (77%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
+ RS+RF + E K Y A++L+K +S+ KF ETAE H L +DPKY DQQLR
Sbjct: 2 KKRSRRFSTLLKQIEADKLYSPLDALNLMKNLSNVKFIETAEVHIVLGLDPKYADQQLRT 61
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
TV LPKGTGK ++VAV+ Q K +EAK++GAD+VGG+DLI++IK G ++FDKLIA+PDMM
Sbjct: 62 TVMLPKGTGKIMRVAVITQNNKTHEAKSSGADIVGGEDLIDEIKKGRLDFDKLIATPDMM 121
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+ +A LGKILGP+GLMP+PKAGTVT N+ I+EFK GK+EY+ D++GI+HIPFGK +F+
Sbjct: 122 MSIAKLGKILGPKGLMPSPKAGTVTHNLITTIKEFKAGKLEYKIDRSGILHIPFGKLNFN 181
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 356
+DL IN + +SI+ N+P+G+KG YWKS +I S+MGPSI L+I+
Sbjct: 182 VEDLHINLITLQESIDRNRPQGSKGKYWKSVHINSTMGPSIPLDIQ 227
>sp|Q7V478|RL1_PROMM 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplA PE=3 SV=1
Length = 235
Score = 274 bits (700), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 163/208 (78%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG+SV++AV+++GEK
Sbjct: 25 AIQLVKENATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVISRGEKLA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
EAK AGA+L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 EAKTAGAELAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
TT++ AI+EFK GK+E+RAD+ GIVH+ FGKA FS D LL N ++I+ NKP GAK
Sbjct: 145 TTDLAAAIKEFKAGKLEFRADRAGIVHVRFGKASFSADALLENLKTLQETIDRNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWKS YI S+MGPS+ +++ + D +
Sbjct: 205 GRYWKSLYITSTMGPSVEVDVTALQDLE 232
>sp|A5GPD4|RL1_SYNPW 50S ribosomal protein L1 OS=Synechococcus sp. (strain WH7803)
GN=rplA PE=3 SV=1
Length = 235
Score = 274 bits (700), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 171/227 (75%), Gaps = 1/227 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKR + N E ++ Y+ AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+
Sbjct: 5 SKRLASLVNKIE-ERAYEPLEAIKLVKENATAKFDETVEAHARLGIDPKYTDQQLRTTVA 63
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP GTG++V++AV+ +GEK EAK AGA+L G +DL+E I G M+FD LIA+PDMM KV
Sbjct: 64 LPHGTGQTVRIAVITRGEKVAEAKAAGAELAGDEDLVETISKGEMDFDLLIATPDMMPKV 123
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LG++LGPRGLMPNPKAGTVTT++ AI EFK GK+E+RAD+TGIVH+ FGKA FSE +
Sbjct: 124 AKLGRVLGPRGLMPNPKAGTVTTDLAAAINEFKAGKLEFRADRTGIVHVRFGKASFSEGN 183
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
LL N ++I+ NKP GAKG YWKS Y+ S+MGPS+ ++I + D
Sbjct: 184 LLDNLKTLQETIDRNKPSGAKGRYWKSLYVTSTMGPSVEVDIAALQD 230
>sp|A2CDE8|RL1_PROM3 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9303) GN=rplA PE=3 SV=2
Length = 235
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/208 (61%), Positives = 162/208 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG+SV++AV+ +GEK
Sbjct: 25 AIQLVKENATAKFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVITRGEKLA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
EAK AGA+L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 EAKTAGAELAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
TT++ AI+EFK GK+E+RAD+ GIVH+ FGKA FS D LL N ++I+ NKP GAK
Sbjct: 145 TTDLAAAIKEFKAGKLEFRADRAGIVHVRFGKASFSADALLENLKTLQETIDRNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWKS YI S+MGPS+ +++ + D +
Sbjct: 205 GRYWKSLYITSTMGPSVEVDVTALQDIE 232
>sp|A6MVP8|RK1_RHDSA 50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina
GN=rpl1 PE=3 SV=1
Length = 234
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 141/227 (62%), Positives = 176/227 (77%), Gaps = 1/227 (0%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
S+R +IQ E + Y A++LLK++++ KFTETAEAH L ID KY DQQLR T+
Sbjct: 5 SQRVKKIQTKVE-LRPYKGTEALNLLKELATAKFTETAEAHISLKIDTKYADQQLRTTLV 63
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LPKGTGK V++AV+AQGEK NEA AGADL G +DLI+ I G ++FD+LIA+PDMM +
Sbjct: 64 LPKGTGKKVRIAVVAQGEKINEALAAGADLAGAEDLIQNIMKGDLDFDRLIATPDMMPAI 123
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LGK+LGPRGLMP+PK+GTVT +I +AI+EFKKGK+EYRADK+GIVHI FGK DFS +D
Sbjct: 124 AKLGKVLGPRGLMPSPKSGTVTADIKEAIDEFKKGKLEYRADKSGIVHILFGKTDFSVED 183
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
LL N A +SI+ N+P G KG YWKS YICS+MGPSI+L+I E D
Sbjct: 184 LLANLEAVQESIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRD 230
>sp|P51338|RK1_PORPU 50S ribosomal protein L1, chloroplastic OS=Porphyra purpurea
GN=rpl1 PE=3 SV=1
Length = 229
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 167/212 (78%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y L A+++L+ S+ KF ETAEAH L ++PKY DQQLRATV LPKGTGK VKVAV+
Sbjct: 18 KLYSLNEAVTILRATSNAKFKETAEAHISLGLNPKYADQQLRATVILPKGTGKLVKVAVI 77
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+GEK EA NAGAD+ G ++LI++I G ++FDKLIA+PD+M +A LG++LGPRGLMP
Sbjct: 78 AKGEKLTEAMNAGADISGSEELIDEISKGRLDFDKLIATPDIMPLIAKLGRVLGPRGLMP 137
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
+PKAGTVT +I ++I EFK GKVEYR D+TGI+H+PFGK+ F E+DL++N SI+
Sbjct: 138 SPKAGTVTLDITKSINEFKGGKVEYRVDRTGIIHVPFGKSSFPEEDLVMNLQTIKDSIDK 197
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
NKP G+KG YWK+ ++ S+MGPSI+++I +L
Sbjct: 198 NKPSGSKGKYWKTFFLSSTMGPSIQIDITSLL 229
>sp|Q1XDE9|RK1_PORYE 50S ribosomal protein L1, chloroplastic OS=Porphyra yezoensis
GN=rpl1 PE=3 SV=1
Length = 229
Score = 271 bits (692), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 169/212 (79%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y + A+S+LK S+ KF ETAEAH L ++PKY DQQLRATV LPKGTGK +KVAV+
Sbjct: 18 KLYTINEAVSILKATSNAKFKETAEAHIALGLNPKYADQQLRATVILPKGTGKLIKVAVI 77
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+GEK EA +AGAD+ G ++LI++I G ++FDKLIA+PD+M +A LG++LGPRGLMP
Sbjct: 78 AKGEKLTEAISAGADVSGSEELIDEILKGRLDFDKLIATPDVMPLIAKLGRVLGPRGLMP 137
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
+PKAGTVT ++ +A+ EFK GKVEYR D+TGI+H+PFGK+ FS++DL++N +SI+
Sbjct: 138 SPKAGTVTLDVAKAVNEFKGGKVEYRVDRTGIIHVPFGKSSFSQEDLVLNLQTIKESIDR 197
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEML 359
NKP GAKG YWK+ ++ S+MGPSI+++I +L
Sbjct: 198 NKPSGAKGKYWKTFFLSSTMGPSIQIDITSLL 229
>sp|Q7NK78|RL1_GLOVI 50S ribosomal protein L1 OS=Gloeobacter violaceus (strain PCC 7421)
GN=rplA PE=3 SV=1
Length = 238
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/230 (55%), Positives = 174/230 (75%)
Query: 134 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVS 193
SKR ++ + + Y + A+ LLKQ ++ KF ETAE H RL I+PKY DQQ+R+TV
Sbjct: 5 SKRLKALREQVDRQTIYAPQKALELLKQTANAKFDETAETHIRLGINPKYADQQVRSTVV 64
Query: 194 LPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKV 253
LP+GTGK++++AVLA+GEK EA+ AGAD+ G ++LIE+I+GGFMEFD +IA+PD+M +V
Sbjct: 65 LPRGTGKAIRIAVLAKGEKVREAEKAGADIAGSEELIERIQGGFMEFDLMIATPDIMPQV 124
Query: 254 ASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDD 313
A LGK+LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVHIPFGK F+ +
Sbjct: 125 ARLGKLLGPRGLMPSPKGGTVTMDLVGAIREFKAGKLEFRADRTGIVHIPFGKVSFTPEA 184
Query: 314 LLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
L+ N + +I+ KP GAKG YW++ +I S+MGPSI ++I + D KL
Sbjct: 185 LMDNLKSVQDAIDRAKPSGAKGRYWRTFHIKSTMGPSIEIDINALRDLKL 234
>sp|Q7VDY6|RL1_PROMA 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rplA PE=3 SV=1
Length = 234
Score = 270 bits (689), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 164/215 (76%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y AI L+K+ ++ KF ET EAH RL IDPKY DQQ+R TVSLPKGTG+ V++AV+
Sbjct: 18 KSYAPLEAIQLVKENANAKFDETIEAHIRLGIDPKYTDQQIRTTVSLPKGTGQKVRIAVI 77
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+GEK EA +AGADL G ++LI+ I G M FD LI++PDMM KVA LG++LGPRGLMP
Sbjct: 78 AKGEKVAEANSAGADLAGEEELIDSISKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMP 137
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPKAGTVTT++ +I+EFK GK+E+RAD+ GIVH+ FGKA FS +DLL N ++I+
Sbjct: 138 NPKAGTVTTDLISSIKEFKAGKLEFRADRAGIVHVRFGKASFSPEDLLENLKVLHEAIDR 197
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
NKP GAKG YWKS YI S+MGPS+ ++I + D K
Sbjct: 198 NKPSGAKGRYWKSLYITSTMGPSVEIDIAALQDSK 232
>sp|A8G2L0|RL1_PROM2 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9215) GN=rplA PE=3 SV=1
Length = 235
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 163/208 (78%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A+S++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+++AV+ GE +
Sbjct: 25 ALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIRIAVITSGENVS 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK+AGADL G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKSAGADLFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAK
Sbjct: 145 TNDIGNAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFENLKTLQESIDKNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWKS Y+ S+MGPS++++I + DY+
Sbjct: 205 GKYWKSFYVTSTMGPSVQVDINAVQDYQ 232
>sp|A2BUI0|RL1_PROM5 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplA PE=3 SV=1
Length = 235
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 163/208 (78%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A++++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE
Sbjct: 25 ALAIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK+AGADL G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKSAGADLFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T++I AI+EFK GK+E+RADK GIVH+ FGKA F+E+ L N +SI+ NKP GAK
Sbjct: 145 TSDIASAIKEFKAGKLEFRADKAGIVHVRFGKASFTENALFENLKTLQESIDKNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWK+ Y+ S+MGPS++++I + DY+
Sbjct: 205 GKYWKTFYVTSTMGPSVQVDINALQDYQ 232
>sp|Q3AGT0|RL1_SYNSC 50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9605)
GN=rplA PE=3 SV=1
Length = 235
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 161/208 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
AI+L+K ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+SV++AV+ +GEK
Sbjct: 25 AIALVKDNANAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQSVRIAVVTRGEKVA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
EAK AGA+L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 EAKAAGAELAGEEDLVESISKGEMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
TT++ AI+EFK GK+E+RAD+TGIVH+ FGKA FS D LL N ++I+ NKP GAK
Sbjct: 145 TTDLEAAIKEFKAGKLEFRADRTGIVHVRFGKASFSADALLQNLKTLQETIDRNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWKS Y+ S+MGPS+ ++ + D +
Sbjct: 205 GRYWKSLYVTSTMGPSVEVDFSALQDIE 232
>sp|A2BNZ8|RL1_PROMS 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain AS9601)
GN=rplA PE=3 SV=1
Length = 235
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 161/208 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A+S++K+ ++ KF ET EAH RL IDPKY DQQLR TV LP GTG+S+K+AV+ GE +
Sbjct: 25 ALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVVLPHGTGQSIKIAVITSGENVS 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK AGADL G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKAAGADLFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAK
Sbjct: 145 TNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWK+ Y+ S+MGPS++L+I + DY+
Sbjct: 205 GKYWKTFYVTSTMGPSVQLDINAVQDYQ 232
>sp|Q2JTQ5|RL1_SYNJA 50S ribosomal protein L1 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=rplA PE=3 SV=1
Length = 236
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 132/235 (56%), Positives = 175/235 (74%), Gaps = 5/235 (2%)
Query: 131 RTRSKRFLEIQNLREGKK--EYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQL 188
R SKR +Q LRE K Y A++L+K+ ++ KF E AE H RL IDPKY DQQL
Sbjct: 3 RKLSKR---MQALREKVKPIAYPPAEALALMKETATAKFDEAAEVHIRLGIDPKYADQQL 59
Query: 189 RATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPD 248
R TV LP+GTG+ ++VAV+A+GEK EA+NAGAD VG +DLIE+I G ++FD LIA+PD
Sbjct: 60 RTTVVLPRGTGQEIRVAVIARGEKVTEAQNAGADRVGFEDLIEEIGKGVIDFDLLIATPD 119
Query: 249 MMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKAD 308
+M +VA LG++LGPRGLMP+PK GTVT ++ QAI+EFK GK+EYRADKTGIVH+ FGK
Sbjct: 120 VMPQVAKLGRLLGPRGLMPSPKGGTVTMDLAQAIKEFKAGKLEYRADKTGIVHLIFGKCK 179
Query: 309 FSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
F + LL N A +SI+ N+P GAKG YW++ ++C++MGPSI ++I + + KL
Sbjct: 180 FPVEALLENLKAVQESIDRNRPPGAKGKYWRALHVCATMGPSIEVDINALRELKL 234
>sp|A3PAS1|RL1_PROM0 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9301) GN=rplA PE=3 SV=1
Length = 235
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 162/208 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A+S++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE +
Sbjct: 25 ALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVS 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK AGADL G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKAAGADLFGEEDLVESINKGNMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP GAK
Sbjct: 145 TNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWK+ Y+ S+MGPS++++I + DY+
Sbjct: 205 GKYWKTFYVTSTMGPSVQVDINAVQDYQ 232
>sp|Q0I6K8|RL1_SYNS3 50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9311)
GN=rplA PE=3 SV=1
Length = 235
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 164/215 (76%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
+ Y AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP+GTG++V++AV+
Sbjct: 18 RAYQPLEAIQLVKENATAKFDETMEAHVRLGIDPKYTDQQLRTTVALPQGTGQTVRIAVI 77
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
+GEK EAK AGA+L G +DL+E I G M FD LIA+PDMM KVA LG++LGPRGLMP
Sbjct: 78 TRGEKVAEAKAAGAELSGDEDLVEAISKGEMNFDLLIATPDMMPKVAKLGRVLGPRGLMP 137
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPKAGTVTT++ AI+EFK GK+E+RAD+TGIVH+ FGKA F+ + LL N ++I+
Sbjct: 138 NPKAGTVTTDLASAIQEFKAGKLEFRADRTGIVHVRFGKASFTAEALLENLKTLQETIDR 197
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
NKP GAKG YWKS Y+ S+MGPS+ ++I + D +
Sbjct: 198 NKPSGAKGRYWKSLYVTSTMGPSVEVDIALLQDIE 232
>sp|Q46HH0|RL1_PROMT 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL2A)
GN=rplA PE=3 SV=1
Length = 235
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 163/216 (75%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAV 206
++ Y AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+ +++AV
Sbjct: 17 ERSYSPIEAIKLVKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAV 76
Query: 207 LAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLM 266
+ +GEK NEA AGADL G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLM
Sbjct: 77 VTRGEKVNEATKAGADLAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLM 136
Query: 267 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIE 326
PNPKAGTVTT++ AI+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE
Sbjct: 137 PNPKAGTVTTDLEGAIKEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIE 196
Query: 327 ANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
NKP GAKG +W+S +I S+MGPS+ ++I E+ D +
Sbjct: 197 KNKPSGAKGKFWRSFFITSTMGPSVEVDINELQDLQ 232
>sp|A2C033|RL1_PROM1 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL1A)
GN=rplA PE=3 SV=1
Length = 235
Score = 268 bits (686), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 163/216 (75%)
Query: 147 KKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAV 206
++ Y AI L+K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+ +++AV
Sbjct: 17 ERSYSPIEAIKLVKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPSGTGQKIRIAV 76
Query: 207 LAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLM 266
+ +GEK NEA AGADL G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLM
Sbjct: 77 VTRGEKVNEATKAGADLAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLM 136
Query: 267 PNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIE 326
PNPKAGTVTT++ AI+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE
Sbjct: 137 PNPKAGTVTTDLEGAIKEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIE 196
Query: 327 ANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
NKP GAKG +W+S +I S+MGPS+ ++I E+ D +
Sbjct: 197 KNKPSGAKGKFWRSFFITSTMGPSVEVDINELQDLQ 232
>sp|Q85G11|RK1_CYAME 50S ribosomal protein L1, chloroplastic OS=Cyanidioschyzon merolae
GN=rpl1 PE=3 SV=1
Length = 224
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/225 (56%), Positives = 167/225 (74%), Gaps = 5/225 (2%)
Query: 133 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATV 192
RSKR+ + +L E K Y + A+ LLK++++ KF ETAEAH RLN+DPKY DQQ+RATV
Sbjct: 3 RSKRYQSLCSLIE-PKLYSPQEALKLLKKLATAKFVETAEAHIRLNLDPKYTDQQIRATV 61
Query: 193 SLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVK 252
LP GTGK++++AV+ + E GADLVG DDL QI + FD LIA+PDMM
Sbjct: 62 VLPHGTGKAIRIAVITKQSSHIE----GADLVGSDDLCAQIAQSIINFDCLIATPDMMPT 117
Query: 253 VASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSED 312
+A LGKILGPRGLMP+PK+GTVTTN+ +AI+ F++G++EYR DKTGIVH+ FG+ DF+E
Sbjct: 118 LAKLGKILGPRGLMPSPKSGTVTTNVAEAIQAFRRGQIEYRTDKTGIVHLAFGRMDFNEQ 177
Query: 313 DLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKE 357
L N +A +S+E NKP GA G+YWKS I +SM PSIRLNI++
Sbjct: 178 HLYDNLVAIKESVETNKPSGASGLYWKSFAIATSMSPSIRLNIQQ 222
>sp|Q2JM50|RL1_SYNJB 50S ribosomal protein L1 OS=Synechococcus sp. (strain
JA-2-3B'a(2-13)) GN=rplA PE=3 SV=1
Length = 236
Score = 268 bits (685), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 131/237 (55%), Positives = 176/237 (74%), Gaps = 5/237 (2%)
Query: 131 RTRSKRFLEIQNLREGKK--EYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQL 188
R SKR +Q LRE K Y + A++L+K+ ++ KF E AE H RL IDPKY DQQL
Sbjct: 3 RKLSKR---MQALREKVKPIAYAPEAALALMKETATAKFEEAAEVHIRLGIDPKYADQQL 59
Query: 189 RATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPD 248
R TV LP+GTG+ ++VAV+A+GEK EA+NAGAD VG +DLIE+I G M+FD LIA+PD
Sbjct: 60 RTTVVLPRGTGQEIRVAVIARGEKVVEAQNAGADRVGYEDLIEEISKGMMDFDLLIATPD 119
Query: 249 MMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKAD 308
+M +VA LG++LGPRGLMP+PK GTVT ++ QAI+EFK GK+EYRAD+TGIVH+ FGK
Sbjct: 120 VMPQVAKLGRLLGPRGLMPSPKGGTVTMDLAQAIKEFKAGKLEYRADRTGIVHLIFGKCK 179
Query: 309 FSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPS 365
F + LL N A +SI+ N+P GAKG YW++ ++ ++MGPSI ++I + + KL +
Sbjct: 180 FPVEALLENLKAVQESIDRNRPSGAKGKYWRTLHVSATMGPSIEVDINALRELKLAT 236
>sp|Q31CX8|RL1_PROM9 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplA PE=3 SV=1
Length = 235
Score = 268 bits (684), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 163/208 (78%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A+S++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE +
Sbjct: 25 ALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPHGTGQSIKIAVITSGENVS 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK+AGADL G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKSAGADLFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP G+K
Sbjct: 145 TNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGSK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YWKS Y+ S+MGPS++++I + DY+
Sbjct: 205 GKYWKSFYVTSTMGPSVQVDISAVQDYQ 232
>sp|Q7V382|RL1_PROMP 50S ribosomal protein L1 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rplA PE=3 SV=1
Length = 235
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 161/208 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
A+ ++K+ ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG+S+K+AV+ GE
Sbjct: 25 ALGIVKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALPNGTGQSIKIAVITSGENVA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
+AK+AGADL G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTV
Sbjct: 85 KAKSAGADLFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T +I AI+EFK GK+E+RADK GIVH+ FGKA F+E+ L N +SI+ NKP GAK
Sbjct: 145 TGDIASAIKEFKAGKLEFRADKAGIVHVRFGKASFTENALFENLKTLQESIDKNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLDYK 362
G YW+S Y+ S+MGPS++++I + DY+
Sbjct: 205 GKYWRSFYLTSTMGPSVQVDINALQDYQ 232
>sp|B1XJH1|RL1_SYNP2 50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplA PE=3 SV=1
Length = 238
Score = 266 bits (681), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 164/213 (76%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
+ Y+ A++LLK+ ++ KF ETAEAH RL IDPKY DQQLR TV+ PKGTG+SV+VAV+
Sbjct: 19 RAYEPLEALTLLKETATAKFDETAEAHIRLGIDPKYTDQQLRTTVAFPKGTGQSVRVAVI 78
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
GE+ A+ +GADLVG ++LIE I+ G M+F+ LIA+PDMM KVA LG+ LGPRGLMP
Sbjct: 79 TSGEQVKVAEESGADLVGSEELIEDIQKGMMDFEVLIATPDMMPKVARLGRQLGPRGLMP 138
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
+PK GTVTT++ AI FK GK E+RAD+ GIVH+ FGK+ F+ +DLL+N A ++I+
Sbjct: 139 SPKGGTVTTDVATAIAAFKAGKQEFRADRAGIVHVLFGKSSFAAEDLLVNLKALQETIDR 198
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
N+P GAKG YW+S Y+ +SMGPSI+++I + D
Sbjct: 199 NRPSGAKGRYWRSIYVSASMGPSIQVDINALRD 231
>sp|Q7U3T7|RL1_SYNPX 50S ribosomal protein L1 OS=Synechococcus sp. (strain WH8102)
GN=rplA PE=3 SV=1
Length = 235
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 162/213 (76%)
Query: 150 YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQ 209
Y+ AI+L+K ++ KF ET EAH RL IDPKY DQQLR TV+LP GTG++V++AV+ +
Sbjct: 20 YEPLEAIALVKDNATAKFDETMEAHVRLGIDPKYTDQQLRTTVALPNGTGQTVRIAVVTR 79
Query: 210 GEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNP 269
GEK EAK AGA+L G +DL+E I G MEFD LIA+PDMM KVA LG++LGPRGLMPNP
Sbjct: 80 GEKVAEAKAAGAELAGDEDLVETIAKGEMEFDLLIATPDMMPKVAKLGRVLGPRGLMPNP 139
Query: 270 KAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANK 329
KAGTVT ++ AI+EFK GK+E+RAD+TGIVH+ FGKA F+ + LL N ++I+ NK
Sbjct: 140 KAGTVTIDLAGAIQEFKAGKLEFRADRTGIVHVRFGKASFTAEALLQNLKTLQETIDRNK 199
Query: 330 PKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 362
P GAKG YWKS Y+ S+MGPS+ ++ + D +
Sbjct: 200 PSGAKGRYWKSLYVTSTMGPSVEVDFSALQDIE 232
>sp|Q119S7|RL1_TRIEI 50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain
IMS101) GN=rplA PE=3 SV=1
Length = 238
Score = 265 bits (678), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/226 (57%), Positives = 177/226 (78%), Gaps = 2/226 (0%)
Query: 140 IQNLREGKKE--YDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKG 197
+Q LR+ +E Y+ K A+ LLK+ ++ KF E AEAH RL IDPKY DQQLR TV+LPKG
Sbjct: 9 LQELRKKVEERPYEPKEALQLLKETATAKFLEAAEAHVRLGIDPKYTDQQLRTTVALPKG 68
Query: 198 TGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLG 257
TG+++++AV+A+GEK NEA AGADL G ++LIEQI G MEFD+LIA+PD+M +VA LG
Sbjct: 69 TGQTIRIAVIAKGEKVNEALAAGADLAGSEELIEQISKGMMEFDRLIATPDVMPQVAKLG 128
Query: 258 KILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLIN 317
++LGPRGLMP+PK GTVT ++ +AI+EFK GK+E+RAD++GIVH+ FGK FS +DLLIN
Sbjct: 129 RLLGPRGLMPSPKGGTVTFDLTKAIDEFKAGKLEFRADRSGIVHVMFGKTSFSVEDLLIN 188
Query: 318 FLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 363
A + I+ N+P GAKG YW++ ++ ++MGPSI +++ + D KL
Sbjct: 189 LKALQECIDRNRPSGAKGRYWRTIFVSATMGPSIEIDVSSLQDLKL 234
>sp|A9BDG6|RL1_PROM4 50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT
9211) GN=rplA PE=3 SV=1
Length = 234
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 160/206 (77%)
Query: 155 AISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQGEKFN 214
AI+L+K+ S+ KF ET EAH RL IDPKY DQQ+R TV+LP GTG+++++AV+A+GEK
Sbjct: 25 AINLVKESSTAKFDETIEAHVRLGIDPKYTDQQIRTTVTLPNGTGQTIRIAVIARGEKVA 84
Query: 215 EAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTV 274
EAK+AGADL G ++L++ I G M FD LIA+PDMM KVA LG++LGPRGLMPNPK GTV
Sbjct: 85 EAKSAGADLAGEEELVDSISKGEMGFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKTGTV 144
Query: 275 TTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAK 334
T ++ AI+EFK GK+E+RADK GI+H+ FGKA F+ D LL N ++I+ NKP GAK
Sbjct: 145 TADLVGAIKEFKAGKLEFRADKAGIIHVRFGKASFNADALLENLKTLQETIDRNKPSGAK 204
Query: 335 GVYWKSAYICSSMGPSIRLNIKEMLD 360
G +WK+ YI S+MGPSI ++I + D
Sbjct: 205 GRFWKTLYITSTMGPSIEVDIAALQD 230
>sp|P49544|RK1_ODOSI 50S ribosomal protein L1, chloroplastic OS=Odontella sinensis
GN=rpl1 PE=3 SV=1
Length = 230
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 157/209 (75%)
Query: 151 DLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQG 210
+L+ AI++L++ ++ KFTET E H LNIDPKY DQQLR TV+LP G GK++ +AVL
Sbjct: 22 NLEDAITILQETATAKFTETVELHANLNIDPKYADQQLRTTVTLPHGIGKTINIAVLTND 81
Query: 211 EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 270
F EA+ AGAD VG DDLIE+I G + FD LIA+PDMM K+A LG++LGP+GLMP+PK
Sbjct: 82 SNFTEAREAGADRVGSDDLIEEISQGNISFDLLIATPDMMPKLAKLGRVLGPKGLMPSPK 141
Query: 271 AGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+GTV+T + + EFKKGK EY+ADK G+VH+ FGK++F+ L+ N A KSIE N+P
Sbjct: 142 SGTVSTTLTATLSEFKKGKFEYKADKAGVVHVSFGKSNFTHSQLMENLTALYKSIEQNRP 201
Query: 331 KGAKGVYWKSAYICSSMGPSIRLNIKEML 359
G KG Y+KS +IC++MGPSI+L++ L
Sbjct: 202 SGVKGKYFKSLFICTTMGPSIQLDLNIFL 230
>sp|A0T0Q6|RK1_THAPS 50S ribosomal protein L1, chloroplastic OS=Thalassiosira pseudonana
GN=rpl1 PE=3 SV=1
Length = 230
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 166/228 (72%), Gaps = 4/228 (1%)
Query: 128 KRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQ 187
K R +++ +I+N+ L+ AI+LL+ ++ KF E+ E H LNID KY DQQ
Sbjct: 3 KLSRRQNENLKKIKNVVHSS----LEEAITLLQDTATAKFIESVELHANLNIDTKYADQQ 58
Query: 188 LRATVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASP 247
LR TV+LP G GKS+++AVL FNEA GAD+VG +LI+ I G + FD L+A+P
Sbjct: 59 LRTTVTLPHGIGKSMRIAVLTNEANFNEANEGGADIVGSQELIDDISQGNLNFDLLVATP 118
Query: 248 DMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKA 307
DMM K+A LG++LGP+GLMP+PK+GTV+TN+ + + +FKKGK EY+ADKTG+VH+ FGKA
Sbjct: 119 DMMPKLAKLGRVLGPKGLMPSPKSGTVSTNLTETLSDFKKGKFEYKADKTGVVHVNFGKA 178
Query: 308 DFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 355
+FS+D L+ N + +SIE N+P G KG Y+KS +IC+SMGPSI+L++
Sbjct: 179 NFSKDQLMENLTSLYQSIEQNRPSGVKGKYFKSLFICTSMGPSIQLDL 226
>sp|Q9TM00|RK1_CYACA 50S ribosomal protein L1, chloroplastic OS=Cyanidium caldarium
GN=rpl1 PE=3 SV=1
Length = 240
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 119/228 (52%), Positives = 167/228 (73%)
Query: 131 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRA 190
+ RS+RF +Q+ +K + AI+LLK KF+ET E H L+++ KY+DQQLRA
Sbjct: 3 KIRSRRFKILQSQISVEKMCEPIEAINLLKSGPKAKFSETFEVHCCLDLNTKYSDQQLRA 62
Query: 191 TVSLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM 250
+V LPKGTGK K+AV+ + N+ KN G D+VG DL+E I GF+EFD+L+ +PDMM
Sbjct: 63 SVVLPKGTGKRTKIAVITNEAEVNKIKNFGVDIVGSKDLVESIANGFLEFDQLLTTPDMM 122
Query: 251 VKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFS 310
+A +GKILGPRGLMP+PK+G+VT++I AI+EFKKGK+EYR DK+GIVH GK DF+
Sbjct: 123 PVIAKVGKILGPRGLMPSPKSGSVTSDIYNAIQEFKKGKLEYRTDKSGIVHSIIGKIDFT 182
Query: 311 EDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
+DLL N +A KSI+ N+P GAKG YWK+ Y+C++M P+I+++ ++
Sbjct: 183 AEDLLNNLIAIKKSIDQNRPNGAKGKYWKNMYLCTTMSPAIKIDFNKL 230
>sp|A0T0C1|RK1_PHATC 50S ribosomal protein L1, chloroplastic OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=rpl1 PE=3 SV=1
Length = 230
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 157/206 (76%)
Query: 151 DLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVLAQG 210
++ AI++LK+ ++TKF E+ E H LNIDPKY DQQLR TV+LP G GK V +AVL
Sbjct: 22 NIDEAIAVLKETATTKFVESVELHANLNIDPKYADQQLRTTVTLPNGIGKQVVIAVLTNE 81
Query: 211 EKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 270
E F EAK++G D+VG D+LI QI G + FD LIA+P+MM K+A LG++LGP+GLMP+PK
Sbjct: 82 ENFEEAKSSGGDIVGNDELIAQITQGQINFDLLIATPNMMPKLAKLGRMLGPKGLMPSPK 141
Query: 271 AGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKP 330
+GTVT+ + + EFKKGK EY+ADKTGIVH+ FGK++F+ + L+ N A +SIE N+P
Sbjct: 142 SGTVTSTLQSTLTEFKKGKFEYKADKTGIVHVNFGKSNFTNEQLVENLKALYQSIEQNRP 201
Query: 331 KGAKGVYWKSAYICSSMGPSIRLNIK 356
G KG Y+KS IC++MGPS++L+++
Sbjct: 202 SGVKGKYFKSVSICTTMGPSVKLDLE 227
>sp|B4UDT5|RL1_ANASK 50S ribosomal protein L1 OS=Anaeromyxobacter sp. (strain K) GN=rplA
PE=3 SV=1
Length = 234
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 156/211 (73%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV
Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVF 78
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+G+K EA+ AGAD+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMP
Sbjct: 79 AKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMP 138
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I
Sbjct: 139 NPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYK 198
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
KP+ AKGVY K+ + ++MGP I++++ E+
Sbjct: 199 AKPQTAKGVYVKNVTLSTTMGPGIKVDLAEL 229
>sp|B8JB73|RL1_ANAD2 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-1 / ATCC BAA-258) GN=rplA PE=3 SV=1
Length = 234
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 156/211 (73%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV
Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVF 78
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+G+K EA+ AGAD+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMP
Sbjct: 79 AKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMP 138
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F D L NF A ++ I
Sbjct: 139 NPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPDKLKANFSAIMEVIYK 198
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
KP+ AKGVY K+ + ++MGP I++++ E+
Sbjct: 199 AKPQTAKGVYVKNVTLSTTMGPGIKVDLAEL 229
>sp|Q2II81|RL1_ANADE 50S ribosomal protein L1 OS=Anaeromyxobacter dehalogenans (strain
2CP-C) GN=rplA PE=3 SV=1
Length = 234
Score = 244 bits (623), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 156/211 (73%)
Query: 148 KEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVL 207
K Y L A+SL+KQ ++ KF ET +A L +DPK+ DQ +R V LP G GK+V++AV
Sbjct: 19 KRYKLDEAMSLVKQTATKKFDETVDASINLGVDPKHADQVVRGAVVLPHGMGKTVRLAVF 78
Query: 208 AQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMP 267
A+G+K EA+ AGAD+VG +DL E+I+GGFM+FDKLIA+PDMM V LGKILGPRGLMP
Sbjct: 79 AKGDKAKEAQEAGADIVGAEDLAEKIQGGFMDFDKLIATPDMMGVVGRLGKILGPRGLMP 138
Query: 268 NPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEA 327
NPK GTVT ++ +A++E K GKVE+R +K GIVH+PFGKA F + L NF A ++ I
Sbjct: 139 NPKVGTVTMDLARAVKEQKAGKVEFRVEKAGIVHVPFGKASFDPEKLKANFSAIMEVIYK 198
Query: 328 NKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 358
KP+ AKGVY K+ + ++MGP I+L++ E+
Sbjct: 199 AKPQTAKGVYVKNVTLSTTMGPGIKLDLAEL 229
>sp|B5YEX9|RL1_DICT6 50S ribosomal protein L1 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rplA PE=3 SV=1
Length = 242
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 166/231 (71%), Gaps = 3/231 (1%)
Query: 133 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATV 192
R KR+ ++ +L E K Y K A+SL+K++++ KF ET RL +DP++ DQQ+R TV
Sbjct: 4 RGKRYQQLLSLIEKGKLYSPKEAVSLVKKLATAKFDETINLAVRLGVDPRHADQQVRGTV 63
Query: 193 SLPKGTGKSVKVAVLAQGEKFNEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMM-- 250
LP GTGK KV V A+GEK EA+ AGAD VGG+DL++QI+ G+++FD IA+PD+M
Sbjct: 64 VLPYGTGKEKKVLVFAEGEKAQEAREAGADYVGGEDLVKQIESGWLDFDVAIATPDIMGT 123
Query: 251 VKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADF 309
+K+ S LGKILGPRGLMPNPK GTVT +I +A++E+K G+VE+R D+ GIVH+P GKA F
Sbjct: 124 LKIPSRLGKILGPRGLMPNPKTGTVTNDIAKAVKEYKAGRVEFRTDRYGIVHVPIGKASF 183
Query: 310 SEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 360
SE+ L N + + ++ KP AKG Y+KS YI SMGPS+ ++ K + D
Sbjct: 184 SEEALYKNLMTVLGTLLRLKPAAAKGQYFKSIYISPSMGPSVPIDTKNIAD 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,637,794
Number of Sequences: 539616
Number of extensions: 5652814
Number of successful extensions: 13494
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 12388
Number of HSP's gapped (non-prelim): 922
length of query: 367
length of database: 191,569,459
effective HSP length: 119
effective length of query: 248
effective length of database: 127,355,155
effective search space: 31584078440
effective search space used: 31584078440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)