BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017712
(367 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKA 194
S ++L A++ FS+ N++G G FG VY G L DGT +AVK R GG F++E +
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
HRN++R+ F + + +VY +M NGS+ LR + ++ PL++
Sbjct: 89 ISMAVHRNLLRL-RGFCMTPTE----RLLVYPYMANGSVASCLRERPESQ-PPLDW---- 138
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K+ IA+ A L YLH C P I H ++K +N+LLD+E VGDFG+A+ + D
Sbjct: 139 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-X 197
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
+ ++G+ G+I PEY ++S DV+ +G++LLE+ TG R D
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMF---NDELNLHNFVKSALPERAEEILDVVFF 58
G S DV+ +G++LLE+ TG R D +D++ L ++VK L E+ E L V
Sbjct: 218 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 277
Query: 59 QE--IEEEETMYKKASSTCTQ 77
Q +EE + + CTQ
Sbjct: 278 QGNYKDEEVEQLIQVALLCTQ 298
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 125/227 (55%), Gaps = 12/227 (5%)
Query: 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKA 194
S ++L A++ F + N++G G FG VY G L DG +AVK R GG F++E +
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
HRN++R+ F + + +VY +M NGS+ LR + ++ PL++
Sbjct: 81 ISMAVHRNLLRL-RGFCMTPTE----RLLVYPYMANGSVASCLRERPESQ-PPLDW---- 130
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K+ IA+ A L YLH C P I H ++K +N+LLD+E VGDFG+A+ + D
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX- 189
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
+ ++G G+I PEY ++S DV+ +G++LLE+ TG R D
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMF---NDELNLHNFVKSALPERAEEILDVVFF 58
G S DV+ +G++LLE+ TG R D +D++ L ++VK L E+ E L V
Sbjct: 210 GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL 269
Query: 59 QE--IEEEETMYKKASSTCTQ 77
Q +EE + + CTQ
Sbjct: 270 QGNYKDEEVEQLIQVALLCTQ 290
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 23/221 (10%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
DL ATN F LIG G FG VY G L DG +A+K G + F++E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAV-VYKFMPNGSLEEWLRGKD----DTNWRPLNFNFL 253
+H ++V S + + R + + +YK+M NG+L+ L G D +W
Sbjct: 93 RHPHLV------SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW-------- 138
Query: 254 IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDK 313
+++L+I I A L YLH I H ++K N+LLD+ + + DFG+++ +D+
Sbjct: 139 -EQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 314 QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ +KG+ GYI PEY + + DVYSFG++L E+
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 23/221 (10%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
DL ATN F LIG G FG VY G L DG +A+K G + F++E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAV-VYKFMPNGSLEEWLRGKD----DTNWRPLNFNFL 253
+H ++V S + + R + + +YK+M NG+L+ L G D +W
Sbjct: 93 RHPHLV------SLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSW-------- 138
Query: 254 IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDK 313
+++L+I I A L YLH I H ++K N+LLD+ + + DFG+++ + +
Sbjct: 139 -EQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 314 QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ +KG+ GYI PEY + + DVYSFG++L E+
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 136 SFKDLYNATNGFSS------ANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRPGGS 185
SF +L N TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 68
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
+ F E K +H N+V + G G +VY +MPNGSL + L D T
Sbjct: 69 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGT-- 121
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
PL+++ K IA A + +LH + H ++K +N+LLD+ + DFG+A
Sbjct: 122 PPLSWHMRCK----IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
R + I G+T Y+ PE L E + D+YSFG++LLE+ TG+ D
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD 229
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNL 37
G ++ D+YSFG++LLE+ TGL D+ +L L
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 136 SFKDLYNATNGFSS------ANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRPGGS 185
SF +L N TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
+ F E K +H N+V + G G +VY +MPNGSL + L D T
Sbjct: 75 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGT-- 127
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
PL+++ K IA A + +LH + H ++K +N+LLD+ + DFG+A
Sbjct: 128 PPLSWHMRCK----IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
R + I G+T Y+ PE L E + D+YSFG++LLE+ TG+ D
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNL 37
G ++ D+YSFG++LLE+ TGL D+ +L L
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 136 SFKDLYNATNGFSS------ANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRPGGS 185
SF +L N TN F N +G G FG VY G + + TT+AVK + ++
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
+ F E K +H N+V + G G +VY +MPNGSL + L D T
Sbjct: 75 QQFDQEIKVMAKCQHENLVELL----GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGT-- 127
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
PL+++ K IA A + +LH + H ++K +N+LLD+ + DFG+A
Sbjct: 128 PPLSWHMRCK----IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
R + I G+T Y+ PE L E + D+YSFG++LLE+ TG+ D
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNL 37
G ++ D+YSFG++LLE+ TGL D+ +L L
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 26/236 (11%)
Query: 136 SFKDLYNATNGFSS------ANLIGAGNFGSVYNGTLFDGTTIAVK----VFNLIRPGGS 185
SF +L N TN F N G G FG VY G + + TT+AVK + ++
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 65
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
+ F E K +H N+V + G G +VY + PNGSL + L D T
Sbjct: 66 QQFDQEIKVXAKCQHENLVELL----GFSSDGDDL-CLVYVYXPNGSLLDRLSCLDGT-- 118
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
PL+++ K IA A + +LH + H ++K +N+LLD+ + DFG+A
Sbjct: 119 PPLSWHXRCK----IAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
R + I G+T Y PE L E + D+YSFG++LLE+ TG+ D
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVD 226
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDDMFNDELNL 37
G ++ D+YSFG++LLE+ TGL D+ +L L
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 85
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A A+V ++ SL L + F +KK +DIA A + Y
Sbjct: 86 MG--YSTAPQLAIVTQWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDY 135
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L ++ +GDFG+A ++F + GS ++ PE
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+++ Y DVY+FGI+L E+ TG P I
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFN 32
DVY+FGI+L E+ TG P ++ N
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINN 230
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 73
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F +KK +DIA A + Y
Sbjct: 74 MG--YSTKPQLAIVTQWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDY 123
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L ++ +GDFG+A ++F + GS ++ PE
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+++ Y DVY+FGI+L E+ TG P I
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 216
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFN 32
DVY+FGI+L E+ TG P ++ N
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNINN 218
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ +F +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGY 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S A+V ++ SL L + F +KK +DIA A + Y
Sbjct: 89 STKPQL-----AIVTQWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDY 135
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L ++ +GDFG+A ++F + GS ++ PE
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+++ Y DVY+FGI+L E+ TG P I
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFN 32
DVY+FGI+L E+ TG P ++ N
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINN 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 69
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A A+V ++ SL L + F + K +DIA A + Y
Sbjct: 70 MG--YSTAPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKV-----FNLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IGAG+FG+V+ + G+ +AVK+ F+ R F E ++H NIV
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAER---VNEFLREVAIMKRLRHPNIV--- 97
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
F G Q ++V +++ GSL L +++L +A DVA
Sbjct: 98 -LFMGAVTQPPNL-SIVTEYLSRGSLYRLLHKSGARE------QLDERRRLSMAYDVAKG 149
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG-- 325
+ YLH + PPI H NLK N+L+D + V DFG++R K + F+ K + G
Sbjct: 150 MNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-----KASTFLSSKSAAGTP 203
Query: 326 -YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE ++ DVYSFG++L E+ T +P
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 97
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 98 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRD 244
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 96
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 97 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 146
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 218 DVYAFGIVLYELMTGQLPYSNINNRD 243
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 74
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 75 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRD 221
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 74
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 75 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 124
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 217
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 196 DVYAFGIVLYELMTGQLPYSNINNRD 221
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 71
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 72 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 121
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 214
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 193 DVYAFGIVLYELMTGQLPYSNINNRD 218
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 69
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 70 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 97
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 98 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 219 DVYAFGIVLYELMTGQLPYSNINNRD 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 89
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 90 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 139
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 211 DVYAFGIVLYELMTGQLPYSNINNRD 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ N+ P + +FK+E +H NI+ F
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL----LF 69
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
G Y A+V ++ SL L + F + K +DIA A + Y
Sbjct: 70 MG--YSTKPQLAIVTQWCEGSSLYHHLH--------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H +LK +N+ L +++ +GDFG+A ++F + GS ++ PE
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 331 YDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
+ + Y DVY+FGI+L E+ TG P I
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 212
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 9 DVYSFGILLLEMFTGLRPNDDMFNDE 34
DVY+FGI+L E+ TG P ++ N +
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRD 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKV-----FNLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IGAG+FG+V+ + G+ +AVK+ F+ R F E ++H NIV
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAER---VNEFLREVAIMKRLRHPNIV--- 97
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
F G Q ++V +++ GSL L +++L +A DVA
Sbjct: 98 -LFMGAVTQPPNL-SIVTEYLSRGSLYRLLHKSGARE------QLDERRRLSMAYDVAKG 149
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG-- 325
+ YLH + PPI H +LK N+L+D + V DFG++R K + F+ K + G
Sbjct: 150 MNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-----KASXFLXSKXAAGTP 203
Query: 326 -YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE ++ DVYSFG++L E+ T +P
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 249 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 295
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 348
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + I+H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 249 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 295
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 348
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 76 SEEPI------YIVTEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 122
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 123 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 175
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 176 APEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 332 SEEPIY------IVTEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 378
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 431
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 432 APEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 249 SEEPI------YIVGEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 295
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 348
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 349 APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 72 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 118
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 119 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 171
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 172 APEAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 74 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 120
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 121 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 173
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 73 SEEPI------XIVTEYMSKGSLLDFLKGETGKYLR-------LPQLVDMAAQIASGMAY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N +G+ +
Sbjct: 120 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEXTARQGAKFPIKWT 172
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 173 APEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVCEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D++ +A + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLR-------LPQLVDMSAQIASGMAY 126
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 179
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 73 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 119
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H NL+ +N+L+ D + + DFG+AR + + N + +G+ P
Sbjct: 120 FIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAK--FPI 170
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 171 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D++ +A + Y
Sbjct: 80 SEEPI------YIVTEYMNKGSLLDFLKGETGKYLR-------LPQLVDMSAQIASGMAY 126
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 127 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEWTARQGAKFPIKWT 179
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 180 APEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG +SF E + +KH +V+++
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT---LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+ D R L L+ D+A VA + Y
Sbjct: 74 SEEPI------YIVTEYMNKGSLLDFLK---DGEGRALKLPNLV----DMAAQVAAGMAY 120
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + +I + DFG+AR + + N +G+ +
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLI----EDNEXTARQGAKFPIKWT 173
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 174 APEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ + + + +D+A +A + Y
Sbjct: 250 SEEPI------YIVTEYMSKGSLLDFLKGE-------MGKYLRLPQLVDMAAQIASGMAY 296
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+ R + + N + +G+ +
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI----EDNEYTARQGAKFPIKWT 349
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 350 APEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M GSL ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVIEYMSKGSLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEXTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M G L ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVMEYMSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR-PSDGI 363
PE L + DV+SFGILL E+ T R P G+
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 78
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +F+P GSL E+L+ + + + L + I K ++
Sbjct: 79 ---YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK----GME 131
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 132 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 181
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 130 QTINNPSFKDLYNA-TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS- 187
Q P ++D + +GAG FG V+ G T +AVK GS S
Sbjct: 3 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSP 58
Query: 188 --FKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
F +E ++H+ +VR++ + Q + ++ ++M NGSL ++L+
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT------ 106
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
P I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+A
Sbjct: 107 -PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
R + + N + +G+ P ++ EA YG DV+SFGILL E+ T R
Sbjct: 163 RLI----EDNEYTAREGAK--FPIKWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 130 QTINNPSFKDLYNA-TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS- 187
Q P ++D + +GAG FG V+ G T +AVK GS S
Sbjct: 2 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSP 57
Query: 188 --FKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
F +E ++H+ +VR++ + Q + ++ ++M NGSL ++L+
Sbjct: 58 DAFLAEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT------ 105
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
P I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+A
Sbjct: 106 -PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
R + + N + +G+ P ++ EA YG DV+SFGILL E+ T R
Sbjct: 162 RLI----EDNEYTAREGAK--FPIKWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 28/211 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V+ GT T +A+K ++PG ++F E + ++H +V+++
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT---LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +V ++M G L ++L+G+ R + + +D+A +A + Y
Sbjct: 83 SEEPI------YIVTEYMSKGCLLDFLKGEMGKYLR-------LPQLVDMAAQIASGMAY 129
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ + H +L+ +N+L+ + ++ V DFG+AR + + N + +G+ +
Sbjct: 130 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI----EDNEYTARQGAKFPIKWT 182
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIR 358
PE L + DV+SFGILL E+ T R
Sbjct: 183 APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 89 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D++ + K + PPE
Sbjct: 136 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEETSSVGSKFPVRWSPPE 191
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 130 QTINNPSFKDLYNATN-GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS- 187
Q P ++D + +GAG FG V+ G T +AVK GS S
Sbjct: 7 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSP 62
Query: 188 --FKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
F +E ++H+ +VR++ + Q + ++ ++M NGSL ++L+
Sbjct: 63 DAFLAEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT------ 110
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
P I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+A
Sbjct: 111 -PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 166
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
R + + N + +G+ P ++ EA YG DV+SFGILL E+ T R
Sbjct: 167 RLI----EDNEYTAREGAK--FPIKWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K IR G + F E + + + H +V+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 68
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V++FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 69 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 118
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L C + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 119 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K IR G + F E + + + H +V+++
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 66
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V++FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 67 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 116
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L C + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 117 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 172
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K IR G + F E + + + H +V+++
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 71
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V++FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 72 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 121
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L C + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 122 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 177
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 72 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 118
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N + +G+ P
Sbjct: 119 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAK--FPI 169
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 170 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 77 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 123
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N + +G+ P
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEYTAREGAK--FPI 174
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 175 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G FG V+ D +AVK + F+ E + ++H++IVR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR----------GKDDTNWRPLNFNFLIKK 256
F GV +G R +V+++M +G L +LR G +D PL L
Sbjct: 109 F----GVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL--- 160
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316
L +A VA + YL H +L N L+ ++ +GDFGM+R + + D
Sbjct: 161 -LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD---- 212
Query: 317 FICIKGST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + G T ++PPE L + +T DV+SFG++L E+FT
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G FG V+ + D +AVK K F+ E + N++H +IV+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK- 81
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR--GKD-----DTNWRPLNFNFLIKKKLD 259
F GV G +V+++M +G L ++LR G D D R + + L
Sbjct: 82 ---FYGVCGDGDPL-IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
IA +A + YL H +L N L+ ++ +GDFGM+R + + D +
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD----YYR 190
Query: 320 IKGST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ G T ++PPE + + +T DV+SFG++L E+FT
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G FG V+ D +AVK + F+ E + ++H++IVR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR----------GKDDTNWRPLNFNFLIKK 256
F GV +G R +V+++M +G L +LR G +D PL L
Sbjct: 86 F----GVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL--- 137
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316
L +A VA + YL H +L N L+ ++ +GDFGM+R + + D
Sbjct: 138 -LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD---- 189
Query: 317 FICIKGST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + G T ++PPE L + +T DV+SFG++L E+FT
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 73 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D+ + K + PPE
Sbjct: 120 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPE 175
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 176 VLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G FG V+ D +AVK + F+ E + ++H++IVR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR----------GKDDTNWRPLNFNFLIKK 256
F GV +G R +V+++M +G L +LR G +D PL L
Sbjct: 80 F----GVCTEG-RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL--- 131
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316
L +A VA + YL H +L N L+ ++ +GDFGM+R + + D
Sbjct: 132 -LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD---- 183
Query: 317 FICIKGST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + G T ++PPE L + +T DV+SFG++L E+FT
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 74 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D+ + K + PPE
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPE 176
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 80 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D+ + K + PPE
Sbjct: 127 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPE 182
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 69 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D+ + K + PPE
Sbjct: 116 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPE 171
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K IR G + F E + + + H +V+++
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 68
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V++FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 69 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 118
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L + + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 119 LE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 174
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+GAG FG V+ G + T +AVK ++PG ++F E ++H +VR++
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ + ++ ++M GSL ++L+ + L+ K +D + +A + Y
Sbjct: 78 TREEP-----IYIITEYMAKGSLLDFLKSDEGGK-------VLLPKLIDFSAQIAEGMAY 125
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI--- 327
+ + H +L+ +NVL+ + ++ + DFG+AR + + N + +G+ I
Sbjct: 126 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI----EDNEYTAREGAKFPIKWT 178
Query: 328 -PPEYDLGCEASTYGDVYSFGILLLEMFT 355
P + GC + DV+SFGILL E+ T
Sbjct: 179 APEAINFGC-FTIKSDVWSFGILLYEIVT 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 89 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L++D+ + V DFG++R++ D+ + K + PPE
Sbjct: 136 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPE 191
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ + S+ D+++FG+L+ E+++
Sbjct: 192 VLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 130 QTINNPSFKDLYNATN-GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS- 187
Q P ++D + +GAG FG V+ G T +AVK GS S
Sbjct: 5 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSP 60
Query: 188 --FKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
F +E ++H+ +VR++ + Q + ++ ++M NGSL ++L+
Sbjct: 61 DAFLAEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT------ 108
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
P I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+A
Sbjct: 109 -PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
R + + N +G+ P ++ EA YG DV+SFGILL E+ T R
Sbjct: 165 RLI----EDNEXTAREGAK--FPIKWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 37/239 (15%)
Query: 130 QTINNPSFKDLYNATN-GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS- 187
Q P ++D + +GAG FG V+ G T +AVK GS S
Sbjct: 3 QKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSP 58
Query: 188 --FKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
F +E ++H+ +VR++ + Q + ++ ++M NGSL ++L+
Sbjct: 59 DAFLAEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT------ 106
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
P I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+A
Sbjct: 107 -PSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
R + + N +G+ P ++ EA YG DV+SFGILL E+ T R
Sbjct: 163 RLI----EDNEXTAREGAK--FPIKWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPG--GSKSFKSECKAAINIKHRNIVRVFTAF 210
+GAG FG V+ G + T +AVK ++PG ++F E ++H +VR++
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKT---LKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ + ++ +FM GSL ++L+ + L+ K +D + +A + Y
Sbjct: 77 TKEEP-----IYIITEFMAKGSLLDFLKSDEGGK-------VLLPKLIDFSAQIAEGMAY 124
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI--- 327
+ + H +L+ +NVL+ + ++ + DFG+AR + + N + +G+ I
Sbjct: 125 IE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVI----EDNEYTAREGAKFPIKWT 177
Query: 328 -PPEYDLGCEASTYGDVYSFGILLLEMFT 355
P + GC + +V+SFGILL E+ T
Sbjct: 178 APEAINFGC-FTIKSNVWSFGILLYEIVT 205
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K IR G + F E + + + H +V+++
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLY--- 69
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V +FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 70 -GVCLEQAPI-CLVTEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L C + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 120 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 175
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 17 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 74
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 75 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 127
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 128 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 177
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 178 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 77 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 123
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N +G+ P
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEXTAREGAK--FPI 174
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 175 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 78
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 79 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK----GME 131
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 132 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 181
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 73
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 74 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 126
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 127 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 176
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 177 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 77
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 78 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 124
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N +G+ P
Sbjct: 125 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEXTAREGAK--FPI 175
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 176 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 98 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 145
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + +DK+ F + TG
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--LDKE--FDSVHNKTGA 198
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFTGIRP 359
P + E+ +T DV+SFG+LL E+ T P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 78
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 79 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 125
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N +G+ P
Sbjct: 126 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEXTAREGAK--FPI 176
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 177 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 49 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 106
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 107 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 159
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 160 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 209
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 210 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 248
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 22 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 79
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 80 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 132
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 133 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 182
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 183 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V G +A+K +I+ G F E K +N+ H +V+++
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ R ++ ++M NG L +LR + F ++ L++ DV A+ Y
Sbjct: 74 TK-----QRPIFIITEYMANGCLLNYLR--------EMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS---TGYI 327
L H +L N L++D+ + V DFG++R++ +D + + +GS +
Sbjct: 121 LE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LD--DEYTSSRGSKFPVRWS 173
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFT 355
PPE + + S+ D+++FG+L+ E+++
Sbjct: 174 PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 77 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 123
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N +G+ P
Sbjct: 124 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEXTAREGAK--FPI 174
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 175 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 36/215 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVRVFTA 209
+GAG FG V+ G T +AVK GS S F +E ++H+ +VR++
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFLAEANLMKQLQHQRLVRLYAV 85
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ Q + ++ ++M NGSL ++L+ P I K LD+A +A +
Sbjct: 86 VT----QEPIY--IITEYMENGSLVDFLKT-------PSGIKLTINKLLDMAAQIAEGMA 132
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
++ + H +L+ +N+L+ D + + DFG+AR + + N +G+ P
Sbjct: 133 FIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI----EDNEXTAREGAK--FPI 183
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
++ EA YG DV+SFGILL E+ T R
Sbjct: 184 KWT-APEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 78
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 79 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 131
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 132 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 181
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 182 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 75
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 76 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 128
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 129 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 178
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 75
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 76 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 128
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 129 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 178
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 115 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 162
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 163 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 215
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 93
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 94 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 146
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 147 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 196
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G FG V+ + D +AVK K F E + N++H +IV+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK- 79
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR--GKDDTNWRPLN--FNFLIKKKLDIAI 262
F GV +G +V+++M +G L ++LR G D N + L IA
Sbjct: 80 ---FYGVCVEGDPL-IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+A + YL H +L N L+ + ++ +GDFGM+R + + D + + G
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----YYRVGG 188
Query: 323 ST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
T ++PPE + + +T DV+S G++L E+FT
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 82
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 83 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 135
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 136 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 185
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 186 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 81
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 82 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 134
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 135 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 184
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 185 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 223
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 23 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 80
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 81 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 133
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 134 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 183
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 184 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 144
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 197
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 96 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 143
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 196
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 24/216 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIVRVFTAF 210
IG+G+FG+VY G +AVK+ ++ P + +F++E +H NI+ +F +
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGY 100
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
D A+V ++ SL + L ++ F + + +DIA A + Y
Sbjct: 101 MTKDNL-----AIVTQWCEGSSLYKHLHVQET--------KFQMFQLIDIARQTAQGMDY 147
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
LH I H ++K +N+ L + + +GDFG+A + GS ++ PE
Sbjct: 148 LHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRPSDGI 363
+ + + DVYS+GI+L E+ TG P I
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 93
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 94 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 146
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 147 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGE 196
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 197 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 235
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 92 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 139
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 192
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 144
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 197
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 95 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 142
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 195
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 94 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 141
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 194
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 89 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 136
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 189
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 116 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 163
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + + TG
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--YYSVHNKTGA 216
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
IG+G FG V+ G + +A+K I+ G F E + + + H +V+++
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT---IKEGSMSEDDFIEEAEVMMKLSHPKLVQLY--- 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
GV + A +V++FM +G L ++LR + R L F + L + +DV + Y
Sbjct: 89 -GVCLEQAPI-CLVFEFMEHGCLSDYLRTQ-----RGL---FAAETLLGMCLDVCEGMAY 138
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L C + H +L N L+ + + V DFGM RF+ D+ K + PE
Sbjct: 139 LEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPE 194
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
S+ DV+SFG+L+ E+F+
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 76
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 77 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 129
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H NL N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 130 YLGTKRYIHR---------NLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGE 179
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 180 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 218
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 98 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 145
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 198
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFTGIRP 359
P + E+ +T DV+SFG+LL E+ T P
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 96 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 143
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
++YL H +L N +LD++ V DFG+AR + DK+ + TG
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKEXX--SVHNKTGA 196
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 144
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 197
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFTGIRP 359
P + E+ +T DV+SFG+LL E+ T P
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 95 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 142
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 195
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFTGIRP 359
P + E+ +T DV+SFG+LL E+ T P
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 156 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 203
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 256
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 97 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 144
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 197
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 152 LIGAGNFGSVYNGTLF--DGTTI--AVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRV 206
+IG G+FG VY+GTL DG I AVK N I G S F +E + H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
G+ + VV +M +G L ++R + N +K + + VA
Sbjct: 102 L----GICLRSEGSPLVVLPYMKHGDLRNFIRNE--------THNPTVKDLIGFGLQVAK 149
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+++L H +L N +LD++ V DFG+AR + DK+ F + TG
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM--YDKE--FDSVHNKTGA 202
Query: 327 IPPEYDLGCEA------STYGDVYSFGILLLEMFT 355
P + E+ +T DV+SFG+LL E+ T
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS-------KSFKSECKA 194
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
N+ H NIV+++ G+ + R +V +F+P G L L K P+ ++
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCGDLYHRLLDKA----HPIKWSV-- 123
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD--DE---MIGHVGDFGMARFLP 309
KL + +D+A + Y+ + PPI H +L+ N+ L DE + V DFG++
Sbjct: 124 --KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---- 176
Query: 310 AIDKQNRFICIKGSTG---YIPPEYDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
Q + G G ++ PE +G E +Y D YSF ++L + TG P D
Sbjct: 177 ----QQSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 364 FTGK 367
GK
Sbjct: 232 SYGK 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V G + G +AVK +++F +E ++H N+V++
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 74
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
V+ +G + +V ++M GSL ++LR + + L + L+K ++DV A+ YL
Sbjct: 75 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 125
Query: 273 CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYD 332
+ H +L NVL+ ++ + V DFG+ + + + + PE
Sbjct: 126 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEAL 177
Query: 333 LGCEASTYGDVYSFGILLLEMFT 355
ST DV+SFGILL E+++
Sbjct: 178 REAAFSTKSDVWSFGILLWEIYS 200
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V G + G +AVK +++F +E ++H N+V++
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 83
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
V+ +G + +V ++M GSL ++LR + + L + L+K ++DV A+ YL
Sbjct: 84 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 134
Query: 273 CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYD 332
+ H +L NVL+ ++ + V DFG+ + + + + PE
Sbjct: 135 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEAL 186
Query: 333 LGCEASTYGDVYSFGILLLEMFT 355
+ ST DV+SFGILL E+++
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYS 209
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V G + G +AVK +++F +E ++H N+V++
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 68
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
V+ +G + +V ++M GSL ++LR + + L + L+K ++DV A+ YL
Sbjct: 69 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 119
Query: 273 CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYD 332
+ H +L NVL+ ++ + V DFG+ + + + + PE
Sbjct: 120 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEAL 171
Query: 333 LGCEASTYGDVYSFGILLLEMFT 355
+ ST DV+SFGILL E+++
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYS 194
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 125 VYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF--DGTTIAVKVFNLIRP 182
V G + + N +D+ N ++G G FGSV G L DGT++ V V +
Sbjct: 15 VPRGSEELQN-KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD 73
Query: 183 GGSK----SFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR 238
S+ F SE + H N++R+ + QG V+ FM G L +L
Sbjct: 74 NSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
Query: 239 -GKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG 297
+ +T + + L+K +D+A + YL H +L N +L D+M
Sbjct: 134 YSRLETGPKHIPLQTLLK----FMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTV 186
Query: 298 HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
V DFG+++ + + D + K +I E ++ DV++FG+ + E+ T G
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRG 246
Query: 357 IRPSDGI 363
+ P G+
Sbjct: 247 MTPYPGV 253
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK + F+ E + +++H NIV+
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK- 75
Query: 207 FTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDT--NWRPLNFNFLIKKKLDIAID 263
+ GV Y G R ++ +++P GSL ++L+ + + + L + I K ++
Sbjct: 76 ---YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK----GME 128
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
RY+H D L N+L+++E +GDFG+ + LP DK+ + G
Sbjct: 129 YLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGE 178
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
+ + PE + S DV+SFG++L E+FT I S
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKS 217
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V G + G +AVK +++F +E ++H N+V++
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI-- 255
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
V+ +G + +V ++M GSL ++LR + + L + L+K ++DV A+ YL
Sbjct: 256 VEEKGGLY--IVTEYMAKGSLVDYLRSRGRS---VLGGDCLLK----FSLDVCEAMEYLE 306
Query: 273 CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYD 332
+ H +L NVL+ ++ + V DFG+ + + + + PE
Sbjct: 307 GN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTAPEAL 358
Query: 333 LGCEASTYGDVYSFGILLLEMFT 355
+ ST DV+SFGILL E+++
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYS 381
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGS--KSFKSECKAAINIKHRNIVRVFTAF 210
+GAG FG V+ T T +AVK ++PG ++F +E ++H +V++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ ++ +FM GSL ++L+ D+ + +PL K +D + +A + +
Sbjct: 80 TKEPIY------IITEFMAKGSLLDFLKS-DEGSKQPL------PKLIDFSAQIAEGMAF 126
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ Q H +L+ +N+L+ ++ + DFG+AR + + N + +G+ +
Sbjct: 127 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWT 179
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFT 355
PE + DV+SFGILL+E+ T
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 22/219 (10%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRN 202
F NL+G G+F VY ++ G +A+K+ + + + G + ++E K +KH +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ ++ F +Y +V + NG + +L+ + +P + N +
Sbjct: 73 ILELYNYFEDSNYV-----YLVLEMCHNGEMNRYLKNR----VKPFSEN----EARHFMH 119
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ + YLH I H +L SN+LL M + DFG+A L +++ +C G
Sbjct: 120 QIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--G 174
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
+ YI PE DV+S G + + G P D
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGS--KSFKSECKAAINIKHRNIVRVFTAF 210
+GAG FG V+ T T +AVK ++PG ++F +E ++H +V++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ ++ +FM GSL ++L+ D+ + +PL K +D + +A + +
Sbjct: 253 TKEPIY------IITEFMAKGSLLDFLKS-DEGSKQPL------PKLIDFSAQIAEGMAF 299
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST---GYI 327
+ Q H +L+ +N+L+ ++ + DFG+AR + + N + +G+ +
Sbjct: 300 IE---QRNYIHRDLRAANILVSASLVCKIADFGLARVI----EDNEYTAREGAKFPIKWT 352
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFT 355
PE + DV+SFGILL+E+ T
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 34/235 (14%)
Query: 152 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
LIG G +G+VY G+L D +AVKVF+ + K+ + + ++H NI R
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPL-MEHDNIARFIVGDE 77
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
V G +V ++ PNGSL ++L ++W +A V L YL
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDW---------VSSCRLAHSVTRGLAYL 127
Query: 272 HCDC------QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA------RFLPAIDKQNRFIC 319
H + +P I+H +L NVL+ ++ + DFG++ R + ++ N I
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 320 IKGSTGYIPPEYDLGC-------EASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367
G+ Y+ PE G A D+Y+ G++ E+F +R +D +F G+
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRCTD-LFPGE 239
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 106/244 (43%), Gaps = 44/244 (18%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS-------KSFKSECKA 194
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
N+ H NIV+++ G+ + R +V +F+P G L L K P+ ++
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCGDLYHRLLDKA----HPIKWSV-- 123
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD--DE---MIGHVGDFGMARFLP 309
KL + +D+A + Y+ + PPI H +L+ N+ L DE + V DFG +
Sbjct: 124 --KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---- 176
Query: 310 AIDKQNRFICIKGSTG---YIPPEYDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
Q + G G ++ PE +G E +Y D YSF ++L + TG P D
Sbjct: 177 ----QQSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 364 FTGK 367
GK
Sbjct: 232 SYGK 235
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVR 205
F LIG+G FG V+ DG T +K ++ + E KA + H NIV
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY----NNEKAEREVKALAKLDHVNIVH 68
Query: 206 VFTAFSGVDYQ-------GARFKA----VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
+ G DY +R K + +F G+LE+W+ + R + ++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-----RGEKLDKVL 123
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
L++ + + Y+H + + +LKPSN+ L D +GDFG+ L K+
Sbjct: 124 A--LELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
R KG+ Y+ PE + D+Y+ G++L E+
Sbjct: 179 XRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 134 NPSFKDLYNA-TNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS---FK 189
P ++D + +GAG G V+ G T +AVK GS S F
Sbjct: 1 KPWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK----QGSMSPDAFL 56
Query: 190 SECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
+E ++H+ +VR++ + Q + ++ ++M NGSL ++L+ P
Sbjct: 57 AEANLMKQLQHQRLVRLYAVVT----QEPIY--IITEYMENGSLVDFLKT-------PSG 103
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
I K LD+A +A + ++ + H +L+ +N+L+ D + + DFG+AR +
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYG------DVYSFGILLLEMFTGIR 358
+ R G P EA YG DV+SFGILL E+ T R
Sbjct: 161 DAEXTAR-------EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 44/244 (18%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS-------KSFKSECKA 194
A N IG G FG V+ G L D + +A+K L G + F+ E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
N+ H NIV+++ G+ + R +V +F+P G L L K P+ ++
Sbjct: 77 MSNLNHPNIVKLY----GLMHNPPR---MVMEFVPCGDLYHRLLDKA----HPIKWSV-- 123
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD--DE---MIGHVGDFGMARFLP 309
KL + +D+A + Y+ + PPI H +L+ N+ L DE + V DF ++
Sbjct: 124 --KLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---- 176
Query: 310 AIDKQNRFICIKGSTG---YIPPEYDLGCEASTY---GDVYSFGILLLEMFTGIRPSDGI 363
Q + G G ++ PE +G E +Y D YSF ++L + TG P D
Sbjct: 177 ----QQSVHSVSGLLGNFQWMAPE-TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 364 FTGK 367
GK
Sbjct: 232 SYGK 235
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 153 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRVFTAF 210
IG GNFG V++G L D T +AVK P K+ F E + H NIVR+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI--- 178
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKD-DTNWRPLNFNFLIKKKLDIAIDVACALR 269
GV Q K +Y M E ++G D T R +K L + D A +
Sbjct: 179 -GVCTQ----KQPIYIVM------ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
YL C H +L N L+ ++ + + DFGM+R ++ + G +P
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVXAASGGLRQVPV 279
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFT 355
++ EA YG DV+SFGILL E F+
Sbjct: 280 KWT-APEALNYGRYSSESDVWSFGILLWETFS 310
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDE 34
G SS DV+SFGILL E F+ G P ++ N +
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 32/212 (15%)
Query: 153 IGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVRVFTAF 210
IG GNFG V++G L D T +AVK P K+ F E + H NIVR+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI--- 178
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKD-DTNWRPLNFNFLIKKKLDIAIDVACALR 269
GV Q K +Y M E ++G D T R +K L + D A +
Sbjct: 179 -GVCTQ----KQPIYIVM------ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGME 227
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
YL C H +L N L+ ++ + + DFGM+R ++ + G +P
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVYAASGGLRQVPV 279
Query: 330 EYDLGCEASTYG------DVYSFGILLLEMFT 355
++ EA YG DV+SFGILL E F+
Sbjct: 280 KWT-APEALNYGRYSSESDVWSFGILLWETFS 310
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDE 34
G SS DV+SFGILL E F+ G P ++ N +
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 152 LIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS-----FKSECKAAINIKHRNIVRV 206
+IG G FG VY + G +AVK P S + E K +KH NI+
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARH-DPDEDISQTIENVRQEAKLFAMLKHPNII-- 69
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
A GV + +V +F G L L GK + + L+ + A+ +A
Sbjct: 70 --ALRGVCLKEPNL-CLVMEFARGGPLNRVLSGKR------IPPDILV----NWAVQIAR 116
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEM--------IGHVGDFGMARFLPAIDKQNRFI 318
+ YLH + PI H +LK SN+L+ ++ I + DFG+AR K +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-- 174
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363
G+ ++ PE S DV+S+G+LL E+ TG P GI
Sbjct: 175 --AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI 217
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 42/233 (18%)
Query: 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVR 205
F LIG+G FG V+ DG T ++ ++ + E KA + H NIV
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKY----NNEKAEREVKALAKLDHVNIVH 69
Query: 206 VFTAFSGVDYQ--------------------GARFKA----VVYKFMPNGSLEEWLRGKD 241
+ G DY +R K + +F G+LE+W+ +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR- 128
Query: 242 DTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
R + ++ L++ + + Y+H + H +LKPSN+ L D +GD
Sbjct: 129 ----RGEKLDKVLA--LELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
FG+ L K+ R KG+ Y+ PE + D+Y+ G++L E+
Sbjct: 180 FGLVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGS--KSFKSECKAAINIKHRNIVRVFTAF 210
+GAG FG V+ T T +AVK ++PG ++F +E ++H +V++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ ++ +FM GSL ++L+ D+ + +PL K +D + +A + +
Sbjct: 247 TKEPI------YIITEFMAKGSLLDFLKS-DEGSKQPL------PKLIDFSAQIAEGMAF 293
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
+ Q H +L+ +N+L+ ++ + DFG+AR + K + PE
Sbjct: 294 IE---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPE 339
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT 355
+ DV+SFGILL+E+ T
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E + H+NIVR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 113 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 164
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 165 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E + H+NIVR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 99 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 150
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 151 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 125 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 176
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 177 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 233
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 234 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 115 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 166
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 167 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 223
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 224 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 105 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 156
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 157 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 213
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 214 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 113 CI----GVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 164
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 165 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 152 LIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
++G G +G VY G L + IA+K S+ E ++KH+NIV+ +F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFN-----FLIKKKLDIAIDVA 265
S F + + +P GSL LR K W PL N F K+ L+
Sbjct: 89 SE-----NGFIKIFMEQVPGGSLSALLRSK----WGPLKDNEQTIGFYTKQILE------ 133
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
L+YLH D Q I H ++K NVL++ + + DFG ++ L I+ G+
Sbjct: 134 -GLKYLH-DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGTL 187
Query: 325 GYIPPEY-DLGCEA-STYGDVYSFGILLLEMFTGIRP 359
Y+ PE D G D++S G ++EM TG P
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 99 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 150
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 151 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 207
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 98 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 149
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 150 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 98 CI----GVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 149
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 150 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 206
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 207 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 139 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 190
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 191 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 247
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 248 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 38/227 (16%)
Query: 148 SSANLIGAGNFGSVYNGTLFDGT-----TIAVKVFNLIRPGGSK-SFKSECKAAINIKHR 201
+ +IGAG FG VY G L + +A+K + F E H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 202 NIVRVFTAFSGVDYQGARFKA--VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
NI+R+ S ++K ++ ++M NG+L+++LR KD F + + +
Sbjct: 107 NIIRLEGVIS-------KYKPMMIITEYMENGALDKFLREKDG--------EFSVLQLVG 151
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ +A ++YL H +L N+L++ ++ V DFG++R L D + +
Sbjct: 152 MLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTT 207
Query: 320 IKGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT-GIRP 359
S G IP + EA +Y DV+SFGI++ E+ T G RP
Sbjct: 208 ---SGGKIPIRWT-APEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 90 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 141
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 142 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 198
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 199 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 113 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 164
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 165 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAM 221
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 222 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 116 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 167
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMAR + + C
Sbjct: 168 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAM 224
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 225 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 152 LIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
++G G +G VY G L + IA+K S+ E ++KH+NIV+ +F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFN-----FLIKKKLDIAIDVA 265
S F + + +P GSL LR K W PL N F K+ L+
Sbjct: 75 SE-----NGFIKIFMEQVPGGSLSALLRSK----WGPLKDNEQTIGFYTKQILE------ 119
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
L+YLH D Q I H ++K NVL++ + + DFG ++ L I+ G+
Sbjct: 120 -GLKYLH-DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE--TFTGTL 173
Query: 325 GYIPPEY-DLGCEA-STYGDVYSFGILLLEMFTGIRP 359
Y+ PE D G D++S G ++EM TG P
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 38/226 (16%)
Query: 156 GNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECK--AAINIKHRNIVRVFTAFSGV 213
G FG V+ L + +AVK+F L +S++SE + + +KH N+++ F
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPL---QDKQSWQSEREIFSTPGMKHENLLQ----FIAA 77
Query: 214 DYQGARFKA---VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ +G+ + ++ F GSL ++L+G T W L +A ++ L Y
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGNIIT-WNEL---------CHVAETMSRGLSY 127
Query: 271 LHCDC--------QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAIDKQNRFICIK 321
LH D +P IAH + K NVLL ++ + DFG+A RF P + +
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV- 186
Query: 322 GSTGYIPPEYDLGC-----EASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+ PE G +A D+Y+ G++L E+ + + +DG
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTI----AVKVFN-LIRPGGSKSFKSECKAAINIKH 200
++G+G FG+VY G +G T+ A+K+ N P + F E ++ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++VR+ Q +V + MP+G L E++ D L N+ ++
Sbjct: 77 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ----- 125
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+A + YL + + H +L NVL+ + DFG+AR L +K+
Sbjct: 126 ---IAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-----Y 174
Query: 321 KGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT-GIRPSDGIFT 365
G +P ++ + E Y DV+S+G+ + E+ T G +P DGI T
Sbjct: 175 NADGGKMPIKW-MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 29 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 88
Query: 189 KSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK-----DD 242
SE K ++ +H NIV + A + + G V+ ++ G L +LR K D
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDK 143
Query: 243 TNWRPLNFNFLIKKKLDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ RPL L L + VA + +L +C H ++ NVLL + + +GD
Sbjct: 144 EDGRPLELRDL----LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 195
Query: 302 FGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
FG+AR I + +I +KG+ ++ PE C + DV+S+GILL E+F+ G
Sbjct: 196 FGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 251
Query: 357 IRPSDGIFT 365
+ P GI
Sbjct: 252 LNPYPGILV 260
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 189 KSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK-----DD 242
SE K ++ +H NIV + A + + G V+ ++ G L +LR K D
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDK 151
Query: 243 TNWRPLNFNFLIKKKLDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ RPL L L + VA + +L +C H ++ NVLL + + +GD
Sbjct: 152 EDGRPLELRDL----LHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 203
Query: 302 FGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
FG+AR I + +I +KG+ ++ PE C + DV+S+GILL E+F+ G
Sbjct: 204 FGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 259
Query: 357 IRPSDGIFT 365
+ P GI
Sbjct: 260 LNPYPGILV 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINIKH 200
+ F +G G FG+VY I A+KV L + G + E + +++H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NI+R++ F + ++ +F P G L + L+ + F ++
Sbjct: 74 PNILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQK---------HGRFDEQRSATF 119
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
++A AL Y H + + H ++KP N+L+ + + DFG + P++ + R +C
Sbjct: 120 MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRRXMC- 173
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+PPE G D++ G+L E G+ P D
Sbjct: 174 -GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 93/217 (42%), Gaps = 25/217 (11%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG----GSKSFKSECKAAINIKHRNIVR 205
+IG+G+ G V G L G ++ G + F SE H NI+R
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ GV +G R +V ++M NGSL+ +LR D F I + + + V
Sbjct: 115 L----EGVVTRG-RLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGVG 161
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS-- 323
+RYL H +L NVL+D ++ V DFG++R L D + G
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGGKIP 217
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
+ PE S+ DV+SFG+++ E+ G RP
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 36/232 (15%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTI----AVKVFN-LIRPGGSKSFKSECKAAINIKH 200
++G+G FG+VY G +G T+ A+K+ N P + F E ++ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++VR+ Q +V + MP+G L E++ D L N+
Sbjct: 100 PHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW-------- 145
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + + H +L NVL+ + DFG+AR L +K+
Sbjct: 146 CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE-----Y 197
Query: 321 KGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT-GIRPSDGIFT 365
G +P ++ + E Y DV+S+G+ + E+ T G +P DGI T
Sbjct: 198 NADGGKMPIKW-MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG----GSKSFKSECKAAINIKHRNIVR 205
+IG+G+ G V G L G ++ G + F SE H NI+R
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ GV +G R +V ++M NGSL+ +LR D F I + + + V
Sbjct: 115 L----EGVVTRG-RLAMIVTEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGVG 161
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
+RYL H +L NVL+D ++ V DFG++R L D + G G
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE--DDPDAAXTTTG--G 214
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE S+ DV+SFG+++ E+ G RP
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINIKH 200
+ F +G G FG+VY I A+KV L + G + E + +++H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NI+R++ F + ++ +F P G L + L+ + F ++
Sbjct: 75 PNILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQK---------HGRFDEQRSATF 120
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
++A AL Y H + + H ++KP N+L+ + + DFG + P++ + R +C
Sbjct: 121 MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRRXMC- 174
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+PPE G D++ G+L E G+ P D
Sbjct: 175 -GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINIKH 200
+ F +G G FG+VY I A+KV L + G + E + +++H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NI+R++ F + ++ +F P G L + L+ + F ++
Sbjct: 74 PNILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQK---------HGRFDEQRSATF 119
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
++A AL Y H + + H ++KP N+L+ + + DFG + P++ + R +C
Sbjct: 120 MEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL--RRRXMC- 173
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+PPE G D++ G+L E G+ P D
Sbjct: 174 -GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R+ GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRL----EGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
AR L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 ARVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 61
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 62 AVMKEIKHPNLVQLL----GVCTREPPFYIII-EFMTYGNLLDYLR---ECNRQEVNAVV 113
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 114 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 165
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 166 TXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSK 186
G ++P++ + + +G G +G VY G T+AVK +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVE 59
Query: 187 SFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR 246
F E IKH N+V++ GV + F ++ +FM G+L ++LR + N +
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQ 111
Query: 247 PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
+N L L +A ++ A+ YL + H +L N L+ + + V DFG++R
Sbjct: 112 EVNAVVL----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ D K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 LMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 153 IGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGSKS---FKSECKAAINIKHRNIVR 205
+G G FG VY G + D + + V V L + F E H+NIVR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 VFTAFSGVDYQG-ARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
GV Q RF ++ + M G L+ +LR +P + L L +A D+
Sbjct: 99 CI----GVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAML--DLLHVARDI 150
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
AC +YL + H ++ N LL + +GDFGMA+ + + C
Sbjct: 151 ACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAM 207
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++PPE + ++ D +SFG+LL E+F+
Sbjct: 208 LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE AS D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 151 NLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR-PGGSKSFKSECKAAINI---KHRNIV 204
++G+G FG+V+ G +G +I + V +I G +SF++ + I H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R+ G Q +V +++P GSL + +R L N+ + +
Sbjct: 97 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLLNW--------GVQI 142
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
A + YL + + H NL NVLL V DFG+A LP DKQ + K
Sbjct: 143 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 325 GYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ E + + DV+S+G+ + E+ T G P G+
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 239
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGT----TIAVKVFN--LIRPGGSKSFKSECKAAINIKH 200
F ++G G+FG V+ G+ A+KV ++ K E + + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
IV++ AF +G + ++ F+ G L + R + + + F +
Sbjct: 86 PFIVKLHYAFQT---EGKLY--LILDFLRGGDL--FTRLSKEVMFTEEDVKFYL------ 132
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFI 318
++A AL +LH I + +LKP N+LLD+E GH+ DFG+++ +ID + +
Sbjct: 133 -AELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK--ESIDHEKKAY 184
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+ PE + D +SFG+L+ EM TG P G
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 133 NNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSE 191
++P++ + + +G G +G VY G T+AVK + F E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 64
Query: 192 CKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFN 251
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 65 AAVMKEIKHPNLVQLL----GVCTREPPFYIII-EFMTYGNLLDYLR---ECNRQEVNAV 116
Query: 252 FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
L L +A ++ A+ YL + H +L N L+ + + V DFG++R +
Sbjct: 117 VL----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG- 168
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
D K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 279
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + +N L L +A ++ A+ YL
Sbjct: 280 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVVL----LYMATQISSAMEYL 331
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H NL N L+ + + V DFG++R + D K + PE
Sbjct: 332 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 387
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 388 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 420
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 4 DPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 62
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 63 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 114
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 115 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 166
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 167 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSK 186
G ++P++ + + +G G +G VY G T+AVK +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVE 59
Query: 187 SFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR 246
F E IKH N+V++ GV + F ++ +FM G+L ++LR + N +
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQ 111
Query: 247 PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
+N L L +A ++ A+ YL + H +L N L+ + + V DFG++R
Sbjct: 112 EVNAVVL----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ D K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 LMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 104/240 (43%), Gaps = 31/240 (12%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
++LY + + G FG V+ L + +AVK+F I+ S + E +
Sbjct: 17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFP-IQDKQSWQNEYEVYSLPG 74
Query: 198 IKHRNIVRVFTAFSGVDYQGARFKA---VVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
+KH NI++ F G + +G ++ F GSL ++L+ + +W L
Sbjct: 75 MKHENILQ----FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNEL------ 123
Query: 255 KKKLDIAIDVACALRYLHCDC-------QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307
IA +A L YLH D +P I+H ++K NVLL + + + DFG+A
Sbjct: 124 ---CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 308 LPAIDKQNRFICIKGSTGYIPPEYDLGC-----EASTYGDVYSFGILLLEMFTGIRPSDG 362
A G+ Y+ PE G +A D+Y+ G++L E+ + +DG
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 15 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 73
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 74 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 125
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 126 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 177
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 178 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 151 NLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR-PGGSKSFKSECKAAINI---KHRNIV 204
++G+G FG+V+ G +G +I + V +I G +SF++ + I H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R+ G Q +V +++P GSL + +R L N+ + +
Sbjct: 79 RLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLLNW--------GVQI 124
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
A + YL + + H NL NVLL V DFG+A LP DKQ + K
Sbjct: 125 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 325 GYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ E + + DV+S+G+ + E+ T G P G+
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGT----TIAVKVFN--LIRPGGSKSFKSECKAAINIKH 200
F ++G G+FG V+ G+ A+KV ++ K E + + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
IV++ AF +G + ++ F+ G L + R + + + F +
Sbjct: 87 PFIVKLHYAFQT---EGKLY--LILDFLRGGDL--FTRLSKEVMFTEEDVKFYLA----- 134
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFI 318
++A AL +LH I + +LKP N+LLD+E GH+ DFG+++ +ID + +
Sbjct: 135 --ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK--ESIDHEKKAY 185
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+ PE + D +SFG+L+ EM TG P G
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 229
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGT----TIAVKVFN--LIRPGGSKSFKSECKAAINIKH 200
F ++G G+FG V+ G+ A+KV ++ K E + + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
IV++ AF +G + ++ F+ G L + R + + + F +
Sbjct: 86 PFIVKLHYAFQT---EGKLY--LILDFLRGGDL--FTRLSKEVMFTEEDVKFYLA----- 133
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFI 318
++A AL +LH I + +LKP N+LLD+E GH+ DFG+++ +ID + +
Sbjct: 134 --ELALALDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK--ESIDHEKKAY 184
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ Y+ PE + D +SFG+L+ EM TG P G
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 62
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 63 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 114
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 115 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 166
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 167 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 133 NNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSE 191
++P++ + + +G G +G VY G T+AVK + F E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKE 64
Query: 192 CKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFN 251
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 65 AAVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAV 116
Query: 252 FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
L L +A ++ A+ YL + H +L N L+ + + V DFG++R +
Sbjct: 117 VL----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG- 168
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
D K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 77 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 189 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 209 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 264
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 68 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 180 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R+ GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRL----EGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G + + L+ F ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPRGEVYKELQKLS---------KFDEQRTA 116
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 117 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRX 169
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 170 XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 321
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + +N L L +A ++ A+ YL
Sbjct: 322 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVVL----LYMATQISSAMEYL 373
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H NL N L+ + + V DFG++R + D K + PE
Sbjct: 374 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 429
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 430 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 462
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 4 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 112
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 113 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 165 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 359 P 359
P
Sbjct: 221 P 221
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 6 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 64
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 65 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 116
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 117 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 168
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 220
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 21 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 77
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 78 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 129
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 130 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 181
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 182 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 359 P 359
P
Sbjct: 238 P 238
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 31 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V ++M NGSL+ +LR D
Sbjct: 88 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 139
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 140 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 191
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 192 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 359 P 359
P
Sbjct: 248 P 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R+ GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRL----EGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 37/223 (16%)
Query: 152 LIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGG-----SKSFKSECKAAINIKHRN 202
+IGAG FG V G L + +A+K GG + F SE +H N
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHPN 76
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+R+ GV + ++ +FM NG+L+ +LR D F + + + +
Sbjct: 77 IIRL----EGV-VTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLR 123
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+A +RYL + H +L N+L++ ++ V DFG++RFL + G
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 323 STGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
G IP PE + ++ D +S+GI++ E+ + G RP
Sbjct: 181 --GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLI-RPGGSKSFKSECKAAINIKHRNIV 204
F +G G FG V+ D A+K L R + E KA ++H IV
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 205 RVFTAF----SGVDYQGARFKAVVYKFMP---NGSLEEWLRGKDDTNWRPLNFNFLIKKK 257
R F A+ + Q + K +Y M +L++W+ G+ R +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC------ 120
Query: 258 LDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN-- 315
L I + +A A+ +LH + H +LKPSN+ + + VGDFG+ + +++
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 316 --------RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
R G+ Y+ PE G S D++S G++L E+
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY G T+AVK + F E IKH N+V++
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 73
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + ++ L L +A ++ A+ YL
Sbjct: 74 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVSAVVL----LYMATQISSAMEYL 125
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H +L N L+ + + V DFG++R + D K + PE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPES 181
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 34/248 (13%)
Query: 129 KQTINNPSFKDLYNATNGFSSA---------NLIGAGNFGSVYNGTL-FDGTTIAVKVFN 178
K I+ +++D A + F+ +IGAG FG V +G L G
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIK 77
Query: 179 LIRPGGSKSFKSE--CKAAI--NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLE 234
++ G ++ + + C+A+I H N+V + GV +G +V +FM NG+L+
Sbjct: 78 TLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL----EGVVTRGKPV-MIVIEFMENGALD 132
Query: 235 EWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
+LR D F + + + + +A +RYL H +L N+L++
Sbjct: 133 AFLRKHDG--------QFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSN 181
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGS--TGYIPPEYDLGCEASTYGDVYSFGILLLE 352
++ V DFG++R + D + + G + PE + ++ DV+S+GI++ E
Sbjct: 182 LVCKVSDFGLSRVIED-DPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWE 240
Query: 353 MFT-GIRP 359
+ + G RP
Sbjct: 241 VMSYGERP 248
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G + + L+ F ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPRGEVYKELQKLS---------KFDEQRTA 116
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 169
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R+ GV ++ +V ++M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRL----EGV-VTKSKPVMIVTEYMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 GRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 3 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 61
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 62 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 113
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 114 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 165
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 166 TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
++G G FG V + +A+K + K+F E + + H NIV+++
Sbjct: 15 EVVGRGAFGVVCKAK-WRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLY--- 68
Query: 211 SGVDYQGARFKAV--VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
GA V V ++ GSL L G + PL + + + + + +
Sbjct: 69 ------GACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPY-YTAAHAMSWCLQCSQGV 116
Query: 269 RYLHCDCQPPIAHCNLKPSNVLL-DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI 327
YLH + H +LKP N+LL + + DFG A D Q KGS ++
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 171
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363
PE G S DV+S+GI+L E+ T +P D I
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 4 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 62
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + +N
Sbjct: 63 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVNAVV 114
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 115 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 166
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 167 TYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 25/240 (10%)
Query: 124 PVYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NL 179
P E N K A F +G G FG+VY I A+KV L
Sbjct: 4 PEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 63
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
+ G + E + +++H NI+R++ F A ++ ++ P G++ L+
Sbjct: 64 EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQK 118
Query: 240 KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299
F ++ ++A AL Y H + H ++KP N+LL +
Sbjct: 119 LS---------KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKI 166
Query: 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
DFG + P+ +R + G+ Y+PPE G D++S G+L E G P
Sbjct: 167 ADFGWSVHAPS----SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 26/216 (12%)
Query: 151 NLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
++G G FG V + +A+K + K+F E + + H NIV+++
Sbjct: 14 EVVGRGAFGVVCKAK-WRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLY--- 67
Query: 211 SGVDYQGARFKAV--VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
GA V V ++ GSL L G + PL + + + + + +
Sbjct: 68 ------GACLNPVCLVMEYAEGGSLYNVLHGAE-----PLPY-YTAAHAMSWCLQCSQGV 115
Query: 269 RYLHCDCQPPIAHCNLKPSNVLL-DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI 327
YLH + H +LKP N+LL + + DFG A D Q KGS ++
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWM 170
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363
PE G S DV+S+GI+L E+ T +P D I
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 19/238 (7%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSK 186
G ++P++ + + +G G +G VY G T+AVK +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVE 59
Query: 187 SFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWR 246
F E IKH N+V++ GV + F ++ +FM G+L ++LR + N +
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQ 111
Query: 247 PLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
++ L L +A ++ A+ YL + H +L N L+ + + V DFG++R
Sbjct: 112 EVSAVVL----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ D K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 LMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 112
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 113 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPS----SRRT 165
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 166 TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + ++
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPFYIII-EFMTYGNLLDYLR---ECNRQEVSAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 25/240 (10%)
Query: 124 PVYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NL 179
P E N K A F +G G FG+VY I A+KV L
Sbjct: 13 PEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 72
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
+ G + E + +++H NI+R++ F A ++ ++ P G++ L+
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQK 127
Query: 240 KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299
F ++ ++A AL Y H + H ++KP N+LL +
Sbjct: 128 LS---------KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKI 175
Query: 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
DFG + P+ +R + G+ Y+PPE G D++S G+L E G P
Sbjct: 176 ADFGWSVHAPS----SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + ++
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPFYIII-EFMTYGNLLDYLR---ECNRQEVSAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVY-NGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINI 198
+ F +G G+FG V+ + +G A+KV ++R + E +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
H I+R++ F Q A+ ++ ++ G L LR + F + K
Sbjct: 64 THPFIIRMWGTF-----QDAQQIFMIMDYIEGGELFSLLR-------KSQRFPNPVAKFY 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
A +V AL YLH I + +LKP N+LLD + DFG A+++P + +
Sbjct: 112 --AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV---TYXL 163
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ YI PE + D +SFGIL+ EM G P
Sbjct: 164 C--GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 116
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 169
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 170 TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINIKHRN 202
F +G G FG+VY I A+KV L + G + E + +++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 74 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------RFDEQRTATYIT 119
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++A AL Y H + H ++KP N+LL + DFG + P+ +R + G
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPS----SRRTTLCG 172
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+PPE G D++S G+L E G+ P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 83 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
KG G +P PE +TY DV+SFG++L E+ T +P G+
Sbjct: 195 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 215 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + ++
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVSAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 76 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
KG G +P PE +TY DV+SFG++L E+ T +P G+
Sbjct: 188 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 237
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 208 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V + M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEXMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 282
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + ++ L L +A ++ A+ YL
Sbjct: 283 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVSAVVL----LYMATQISSAMEYL 334
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H NL N L+ + + V DFG++R + D K + PE
Sbjct: 335 E---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 390
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 391 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 19/232 (8%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSEC 192
+P++ + + +G G +G VY G T+AVK + F E
Sbjct: 2 SPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEA 60
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
IKH N+V++ GV + F ++ +FM G+L ++LR + N + ++
Sbjct: 61 AVMKEIKHPNLVQLL----GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVSAVV 112
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
L L +A ++ A+ YL + H +L N L+ + + V DFG++R + D
Sbjct: 113 L----LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-D 164
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE + S DV++FG+LL E+ T G+ P GI
Sbjct: 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 74 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 186 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 206 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 261
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 77 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 189 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 209 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 264
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 96/240 (40%), Gaps = 25/240 (10%)
Query: 124 PVYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NL 179
P E N K A F +G G FG+VY I A+KV L
Sbjct: 13 PEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL 72
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
+ G + E + +++H NI+R++ F A ++ ++ P G++ L+
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQK 127
Query: 240 KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299
F ++ ++A AL Y H + H ++KP N+LL +
Sbjct: 128 LS---------KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKI 175
Query: 300 GDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
DFG + P+ + + +C G+ Y+PPE G D++S G+L E G P
Sbjct: 176 ADFGWSVHAPSSRRDD--LC--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 152 LIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGG-----SKSFKSECKAAINIKHRN 202
+IGAG FG V G L + +A+K GG + F SE +H N
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLK----GGYTERQRREFLSEASIMGQFEHPN 78
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+R+ GV + ++ +FM NG+L+ +LR D F + + + +
Sbjct: 79 IIRL----EGV-VTNSMPVMILTEFMENGALDSFLRLNDG--------QFTVIQLVGMLR 125
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+A +RYL + H +L N+L++ ++ V DFG++RFL ++N +
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL----EENSSDPTET 178
Query: 323 ST--GYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
S+ G IP PE + ++ D +S+GI++ E+ + G RP
Sbjct: 179 SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 4 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 60
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V + M NGSL+ +LR D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEXMENGSLDSFLRKHD--- 112
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 113 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 164
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 165 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 359 P 359
P
Sbjct: 221 P 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 153 IGAGNFGSV---YNGTLFD--GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
+G GNFGSV L D G +AVK P + F+ E + + IV+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK-- 72
Query: 208 TAFSGVDYQGARFK-AVVYKFMPNGSLEEWL---RGKDDTNWRPLNFNFLIKKKLDIAID 263
+ GV Y R + +V +++P+G L ++L R + D + R L ++ I K ++
Sbjct: 73 --YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDAS-RLLLYSSQICKGMEYLGS 129
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
C H +L N+L++ E + DFG+A+ LP +DK + G
Sbjct: 130 RRCV-------------HRDLAARNILVESEAHVKIADFGLAKLLP-LDKDXXVVREPGQ 175
Query: 324 TG--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + PE S DV+SFG++L E+FT
Sbjct: 176 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 76 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 188 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 208 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 263
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 73
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + ++ L L +A ++ A+ YL
Sbjct: 74 GVCTREPPFYIII-EFMTYGNLLDYLR---ECNRQEVSAVVL----LYMATQISSAMEYL 125
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H +L N L+ + + V DFG++R + D K + PE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPES 181
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 70 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 182 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 202 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 257
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF----DGTTIAVKVFNL-IRPGG 184
QT++ F +ATN S ++GAG FG V +G L ++A+K +
Sbjct: 33 QTVHE--FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
+ F E H NI+R GV ++ +V + M NGSL+ +LR D
Sbjct: 90 RRDFLGEASIMGQFDHPNIIR----LEGV-VTKSKPVMIVTEXMENGSLDSFLRKHD--- 141
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
F + + + + +A ++YL H +L N+L++ ++ V DFG+
Sbjct: 142 -----AQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 305 ARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIR 358
+R L D +G G IP PE + ++ DV+S+GI+L E+ + G R
Sbjct: 194 SRVLE--DDPEAAYTTRG--GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 359 P 359
P
Sbjct: 250 P 250
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 65 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 110
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 111 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 163
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 164 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 116
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 169
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 105 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
KG G +P PE +TY DV+SFG++L E+ T +P G+
Sbjct: 217 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 266
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 237 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 292
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 37/249 (14%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 189 KSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD-----D 242
SE K ++ +H NIV + A + + G V+ ++ G L +LR K D
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKSRVLETD 151
Query: 243 TNWRPLNFNFLIKKKLDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ N + L + VA + +L +C H ++ NVLL + + +GD
Sbjct: 152 PAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 207
Query: 302 FGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
FG+AR I + +I +KG+ ++ PE C + DV+S+GILL E+F+ G
Sbjct: 208 FGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 357 IRPSDGIFT 365
+ P GI
Sbjct: 264 LNPYPGILV 272
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH I H +LKP N+LL+++M + DFG A+ L KQ R G
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+ PE A D+++ G ++ ++ G+ P
Sbjct: 202 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 115 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRA 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRA 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 70 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 115
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 116 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 168
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 29/220 (13%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGS----KSFKSECKAAINIKHRNIVR 205
+IGAG FG V +G L G ++ G + + F SE H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ GV + ++ +FM NGSL+ +LR D F + + + + +A
Sbjct: 99 L----EGVVTKSTPV-MIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIA 145
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL D H +L N+L++ ++ V DFG++RFL + G G
Sbjct: 146 AGMKYL-ADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--G 200
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE + ++ DV+S+GI++ E+ + G RP
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY + I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F + R ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF----HDSTRV-YLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRA 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + + +
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD--L 166
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 167 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + + +
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD--L 169
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 170 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 153 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV Y+ L D G +AVK P + F+ E + + IV+
Sbjct: 18 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK- 75
Query: 207 FTAFSGVDY-QGARFKAVVYKFMPNGSLEEWL---RGKDDTNWRPLNFNFLIKKKLDIAI 262
+ GV Y G + +V +++P+G L ++L R + D + R L ++ I K ++
Sbjct: 76 ---YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS-RLLLYSSQICKGMEYLG 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
C H +L N+L++ E + DFG+A+ LP +DK + G
Sbjct: 132 SRRCV-------------HRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPG 177
Query: 323 STG--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + PE S DV+SFG++L E+FT
Sbjct: 178 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
+G G +G V+ G L+ G ++AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFS-SRDEQSWFRETEIYNTVLLRHDNILG-FIASDM 72
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------IAIDVAC 266
+ ++ + +GSL ++FL ++ L+ +A+ AC
Sbjct: 73 TSRNSSTQLWLITHYHEHGSL----------------YDFLQRQTLEPHLALRLAVSAAC 116
Query: 267 ALRYLHCDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA------IDKQN 315
L +LH + +P IAH + K NVL+ + + D G+A I
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 316 RFICIKGSTGYIPPEY-----DLGC-EASTYGDVYSFGILLLEM 353
R G+ Y+ PE C E+ + D+++FG++L E+
Sbjct: 177 RV----GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV +D G +AVK P + F+ E + + IV+
Sbjct: 31 LGKGNFGSV-ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK- 88
Query: 207 FTAFSGVDY-QGARFKAVVYKFMPNGSLEEWL---RGKDDTNWRPLNFNFLIKKKLDIAI 262
+ GV Y G + +V +++P+G L ++L R + D + R L ++ I K ++
Sbjct: 89 ---YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS-RLLLYSSQICKGMEYLG 144
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
C H +L N+L++ E + DFG+A+ LP +DK + G
Sbjct: 145 SRRCV-------------HRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPG 190
Query: 323 STG--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + PE S DV+SFG++L E+FT
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 71 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 116
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + + +
Sbjct: 117 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD--L 171
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 172 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINIKHRN 202
F +G G FG+VY I A+KV L + G + E + +++H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 74 ILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------RFDEQRTATYIT 119
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++A AL Y H + H ++KP N+LL + DFG + P+ + +C G
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT--LC--G 172
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ Y+PPE G D++S G+L E G+ P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVF--NLIR-PGGSKSFKSECKAAINIK 199
++ + ++G G V+ L D +AVKV +L R P F+ E + A +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H IV V+ G +V +++ +L + + + P+ K+ ++
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEG-----PMT----PKRAIE 120
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN---R 316
+ D AL + H Q I H ++KP+N+L+ V DFG+AR + D N +
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAI--ADSGNSVXQ 175
Query: 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ G+ Y+ PE G DVYS G +L E+ TG P FTG
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTG 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 68 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 113
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 114 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRX 166
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 167 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 112
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + + +
Sbjct: 113 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD--L 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 168 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 153 IGAGNFGSV----YNGTLFD--GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G GNFGSV Y+ L D G +AVK P + F+ E + + IV+
Sbjct: 19 LGKGNFGSVELCRYD-PLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK- 76
Query: 207 FTAFSGVDY-QGARFKAVVYKFMPNGSLEEWL---RGKDDTNWRPLNFNFLIKKKLDIAI 262
+ GV Y G + +V +++P+G L ++L R + D + R L ++ I K ++
Sbjct: 77 ---YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDAS-RLLLYSSQICKGMEYLG 132
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
C H +L N+L++ E + DFG+A+ LP +DK + G
Sbjct: 133 SRRCV-------------HRDLAARNILVESEAHVKIADFGLAKLLP-LDKDYYVVREPG 178
Query: 323 STG--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ + PE S DV+SFG++L E+FT
Sbjct: 179 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + + +
Sbjct: 112 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD--L 166
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 167 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 25/224 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 63 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 108
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 109 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 161
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
+ G+ Y+PPE G D++S G+L E G P +
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRX 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 168 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVF--NLIR-PGGSKSFKSECKAAINIK 199
++ + ++G G V+ L D +AVKV +L R P F+ E + A +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H IV V+ G +V +++ +L + + + P+ K+ ++
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEG-----PMT----PKRAIE 120
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN---R 316
+ D AL + H Q I H ++KP+N+++ V DFG+AR + D N +
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQ 175
Query: 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ G+ Y+ PE G DVYS G +L E+ TG P FTG
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTG 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRT 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 66 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 111
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ +R
Sbjct: 112 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRX 164
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 165 XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 67 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 112
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + DFG + P+ + +
Sbjct: 113 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT--L 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C G+ Y+PPE G D++S G+L E G P
Sbjct: 168 C--GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + + P+ +
Sbjct: 70 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N + ++ +GDFGM R + D
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 182 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 141 YNATNGFSSANLIGAGNFG-SVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAI--N 197
+ + + IG G+FG ++ + DG +K N+ R + +S + A+ N
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 198 IKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK 257
+KH NIV+ +F + G+ + +V + G L + + + ++
Sbjct: 80 MKHPNIVQYRESF---EENGSLY--IVMDYCEGGDLFKRINAQKGVLFQEDQI------- 127
Query: 258 LDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRF 317
LD + + AL+++H I H ++K N+ L + +GDFG+AR L + + R
Sbjct: 128 LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR- 183
Query: 318 ICIKGSTGYIPPEYDLGCEASTY---GDVYSFGILLLEMFT 355
CI G+ Y+ PE CE Y D+++ G +L E+ T
Sbjct: 184 ACI-GTPYYLSPEI---CENKPYNNKSDIWALGCVLYELCT 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVF--NLIR-PGGSKSFKSECKAAINIK 199
++ + ++G G V+ L D +AVKV +L R P F+ E + A +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H IV V+ G +V +++ +L + + + P+ K+ ++
Sbjct: 71 HPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTEG-----PMT----PKRAIE 120
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN---R 316
+ D AL + H Q I H ++KP+N+++ V DFG+AR + D N +
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI--ADSGNSVTQ 175
Query: 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ G+ Y+ PE G DVYS G +L E+ TG P FTG
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTG 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 73
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV + F ++ +FM G+L ++LR + N + ++ L L +A ++ A+ YL
Sbjct: 74 GVCTREPPF-YIITEFMTYGNLLDYLR---ECNRQEVSAVVL----LYMATQISSAMEYL 125
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H +L N L+ + + V DFG++R + D K + PE
Sbjct: 126 E---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPES 181
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ S DV++FG+LL E+ T G+ P GI
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIV 204
+G G+FG V +D G +AVK GG+ K E + N+ H NIV
Sbjct: 29 LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIV 86
Query: 205 RVFTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL-IKKKLDIAI 262
+ + G+ + G ++ +F+P+GSL+E+L P N N + +K++L A+
Sbjct: 87 K----YKGICTEDGGNGIKLIMEFLPSGSLKEYL---------PKNKNKINLKQQLKYAV 133
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ + YL H +L NVL++ E +GDFG+ + AI+ +K
Sbjct: 134 QICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK---AIETDKEXXTVKD 187
Query: 323 STG----YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE + + DV+SFG+ L E+ T
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 147 FSSANLIGAGNFGSVY---------NGTLFDGTTI---AVKVFNLIRPGGSKSFKSECKA 194
F ++G G+FG V+ +G L+ + +KV + +R K E
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT------KMERDI 83
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
++ H +V++ AF +G + ++ F+ G L + R + + + F +
Sbjct: 84 LADVNHPFVVKLHYAFQT---EGKLY--LILDFLRGGDL--FTRLSKEVMFTEEDVKFYL 136
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAID 312
++A L +LH I + +LKP N+LLD+E GH+ DFG+++ AID
Sbjct: 137 -------AELALGLDHLHSLG---IIYRDLKPENILLDEE--GHIKLTDFGLSK--EAID 182
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
+ + G+ Y+ PE S D +S+G+L+ EM TG P G
Sbjct: 183 HEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQG 232
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G +G VY G T+AVK + F E IKH N+V++
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLL---- 94
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
GV F +V ++MP G+L ++LR + N + L L +A ++ A+ YL
Sbjct: 95 GVCTLEPPF-YIVTEYMPYGNLLDYLR---ECNREEVTAVVL----LYMATQISSAMEYL 146
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEY 331
+ H +L N L+ + + V DFG++R + D K + PE
Sbjct: 147 E---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPES 202
Query: 332 DLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
S DV++FG+LL E+ T G+ P GI
Sbjct: 203 LAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 235
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNIV 204
+G G+FG V +D G +AVK GG+ K E + N+ H NIV
Sbjct: 17 LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIV 74
Query: 205 RVFTAFSGVDYQ-GARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL-IKKKLDIAI 262
+ + G+ + G ++ +F+P+GSL+E+L P N N + +K++L A+
Sbjct: 75 K----YKGICTEDGGNGIKLIMEFLPSGSLKEYL---------PKNKNKINLKQQLKYAV 121
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ + YL H +L NVL++ E +GDFG+ + AI+ +K
Sbjct: 122 QICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK---AIETDKEXXTVKD 175
Query: 323 STG----YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE + + DV+SFG+ L E+ T
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 54/262 (20%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 22 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 81
Query: 189 KSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR--------- 238
SE K ++ +H NIV + A + + G V+ ++ G L +LR
Sbjct: 82 MSELKIMSHLGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 239 ---------GKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHC-DCQPPIAHCNLKPSN 288
G D + RPL L L + VA + +L +C H ++ N
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDL----LHFSSQVAQGMAFLASKNC----IHRDVAARN 188
Query: 289 VLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST----GYIPPEYDLGCEASTYGDVY 344
VLL + + +GDFG+AR I + +I +KG+ ++ PE C + DV+
Sbjct: 189 VLLTNGHVAKIGDFGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVW 244
Query: 345 SFGILLLEMFT-GIRPSDGIFT 365
S+GILL E+F+ G+ P GI
Sbjct: 245 SYGILLWEIFSLGLNPYPGILV 266
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 79 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 124
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR--- 178
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 179 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGS----KSFKSECKAAINIKHRNIVR 205
+IGAG FG V +G L G ++ G + + F SE H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ GV + ++ +FM NGSL+ +LR D F + + + + +A
Sbjct: 73 L----EGVVTKSTPV-MIITEFMENGSLDSFLRQNDG--------QFTVIQLVGMLRGIA 119
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL H L N+L++ ++ V DFG++RFL + G G
Sbjct: 120 AGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--G 174
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE + ++ DV+S+GI++ E+ + G RP
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 120
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR--- 174
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 175 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 27/235 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + P+ +
Sbjct: 83 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
KG G +P PE +TY DV+SFG++L E+ T +P G+
Sbjct: 195 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 215 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 120
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR--- 174
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 175 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 37/249 (14%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 189 KSECKAAINI-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD-----D 242
SE K ++ +H NIV + A + + G V+ ++ G L +LR K D
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACT---HGGPVL--VITEYCCYGDLLNFLRRKSRVLETD 151
Query: 243 TNWRPLNFNFLIKKKLDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ N + L + VA + +L +C H ++ NVLL + + +GD
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 207
Query: 302 FGMARFLPAIDKQNRFICIKGST----GYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
FG+AR I + +I +KG+ ++ PE C + DV+S+GILL E+F+ G
Sbjct: 208 FGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
Query: 357 IRPSDGIFT 365
+ P GI
Sbjct: 264 LNPYPGILV 272
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 85 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 130
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR--- 184
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 185 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 75 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 120
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 121 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR--- 174
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 175 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 85 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 130
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 131 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR--- 184
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 185 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 36/225 (16%)
Query: 153 IGAGNFGSVYNGTLFDG-----TTIAVKVFN---LIRPGGSKSFKSECKAAINIKHRNIV 204
+G G+FG V G +D ++AVK L +P F E A ++ HRN++
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R++ + +V + P GSL + LR +FL+ A+ V
Sbjct: 79 RLYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQV 124
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-----KQNRFIC 319
A + YL H +L N+LL + +GDFG+ R LP D +++R
Sbjct: 125 AEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR--- 178
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K + PE S D + FG+ L EMFT G P G+
Sbjct: 179 -KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 222
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 68 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 113
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + +FG + P+ +R
Sbjct: 114 TYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPS----SRRT 166
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 167 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 99/235 (42%), Gaps = 14/235 (5%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTLF--DGT--TIAVKVF--NLIRPGGSKSFKS 190
+D+ F+ ++G G FGSV L DG+ +AVK+ ++I + F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGAR-FKAVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
E H ++ ++ +G V+ FM +G L +L P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENP-- 131
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
FN ++ + +D+AC + YL H +L N +L ++M V DFG++R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ D + K ++ E + + DV++FG+ + E+ T G P GI
Sbjct: 189 SGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 25/221 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVF---NLIRPGGSKSFKSECKAAINI 198
A F +G G FG+VY I A+KV L + G + E + ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+H NI+R++ F A ++ ++ P G++ L+ F ++
Sbjct: 69 RHPNILRLYGYF-----HDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTA 114
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
++A AL Y H + H ++KP N+LL + +FG + P+ +R
Sbjct: 115 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPS----SRRT 167
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ G+ Y+PPE G D++S G+L E G P
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGT-TIAVKVF---NLIRPGGSKSFK 189
P + + F +G G FG+VY +A+KV + + G +
Sbjct: 12 TPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR 71
Query: 190 SECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
E + ++ H NI+R++ F Y R ++ ++ P G L + L+ +
Sbjct: 72 REIEIQAHLHHPNILRLYNYF----YDRRRI-YLILEYAPRGELYKELQK---------S 117
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
F ++ I ++A AL Y H + H ++KP N+LL + + DFG + P
Sbjct: 118 CTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP 174
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ ++ +C G+ Y+PPE G + D++ G+L E+ G P
Sbjct: 175 SLRRKT--MC--GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGGSK-SFKSECKAA 195
A + + +G G+FG VY G T +A+K N + F +E
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLI 254
++VR+ GV QG + V+ + M G L+ +LR + P+ +
Sbjct: 73 KEFNCHHVVRLL----GVVSQG-QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K + +A ++A + YL+ + H +L N ++ ++ +GDFGM R + D
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 315 NRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEMFT 355
KG G +P PE +TY DV+SFG++L E+ T
Sbjct: 185 R-----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 GYVSSYGDVYSFGILLLEMFT-GLRPNDDMFNDELNLHNFVKSALPERAEEILDVVF 57
G ++Y DV+SFG++L E+ T +P + N+++ L ++ L ++ + D++F
Sbjct: 205 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDMLF 260
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 25/201 (12%)
Query: 172 IAVKVF--NLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228
+AVKV +L R P F+ E + A + H IV V+ A + +V +++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY-ATGEAETPAGPLPYIVMEYV 98
Query: 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSN 288
+L + + + K+ +++ D AL + H Q I H ++KP+N
Sbjct: 99 DGVTLRDIVHTEGPMTP---------KRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 289 VLLDDEMIGHVGDFGMARFLPAIDKQN---RFICIKGSTGYIPPEYDLGCEASTYGDVYS 345
+++ V DFG+AR + D N + + G+ Y+ PE G DVYS
Sbjct: 147 IMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 346 FGILLLEMFTGIRPSDGIFTG 366
G +L E+ TG P FTG
Sbjct: 205 LGCVLYEVLTGEPP----FTG 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 111 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 156
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 157 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 214 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 257
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGS-KSFKSECKAAINIKHRNIVRVFTAF 210
IG G F V + G +A+K+ + G K+E +A N++H++I +++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ A +V ++ P G L +++ +D + F + A+ Y
Sbjct: 78 -----ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---------QIVSAVAY 123
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
+H AH +LKP N+L D+ + DFG+ P +K GS Y PE
Sbjct: 124 VHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPE 179
Query: 331 YD-----LGCEASTYGDVYSFGILLLEMFTGIRPSD 361
LG EA DV+S GILL + G P D
Sbjct: 180 LIQGKSYLGSEA----DVWSMGILLYVLMCGFLPFD 211
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 2 GYVSSYGDVYSFGILLLEMFTGLRPNDD 29
Y+ S DV+S GILL + G P DD
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 149 SANLIGAGNFGSVYNGTLFDGTT----IAVKVFNLIRPGGS-KSFKSECKAAINIKHRNI 203
S +IG G+FG VY+G D A+K + I ++F E + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
+ A G+ V+ +M +G L +++R N +K + +
Sbjct: 85 L----ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR--------NPTVKDLISFGLQ 132
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
VA + YL + H +L N +LD+ V DFG+AR + +D++ + +
Sbjct: 133 VARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI--LDREY-YSVQQHR 186
Query: 324 TGYIPPEYDLGCEASTY-----GDVYSFGILLLEMFT 355
+P ++ TY DV+SFG+LL E+ T
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + P + E + + H NIV++F
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 83 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 128
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 129 YCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF-C--GSPPYAAP 182
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 183 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 216
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G +G V+ G + G +AVKVF S ++E + ++H NI+ F
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVF-FTTEEASWFRETEIYQTVLMRHENIL----GFIA 98
Query: 213 VDYQGARFKAVVY---KFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
D +G +Y + NGSL ++L+ K L +A L
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKST----------TLDAKSMLKLAYSSVSGLC 148
Query: 270 YLHCDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAIDKQNRFICIK-G 322
+LH + +P IAH +LK N+L+ + D G+A +F+ ++ + + G
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 323 STGYIPPE-YDLGC-----EASTYGDVYSFGILLLEM 353
+ Y+PPE D ++ D+YSFG++L E+
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 57/260 (21%)
Query: 141 YNATNGFSSANL-----IGAGNFGSVYNGTLF-----DGT-TIAVKVFNLIRPGGSK-SF 188
YN F NL +GAG FG V T F D +AVK+ K +
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 189 KSECKAAINI-KHRNIVRVFTAFSG-------VDY----------QGARFKAVVYKFMPN 230
SE K ++ +H NIV + A + +Y + R + Y + P+
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 231 GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL 290
+ EE L +D L+F+ + + + C H ++ NVL
Sbjct: 157 HNPEEQLSSRD-----LLHFSSQVAQGMAFLASKNCI-------------HRDVAARNVL 198
Query: 291 LDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST----GYIPPEYDLGCEASTYGDVYSF 346
L + + +GDFG+AR I + +I +KG+ ++ PE C + DV+S+
Sbjct: 199 LTNGHVAKIGDFGLAR---DIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
Query: 347 GILLLEMFT-GIRPSDGIFT 365
GILL E+F+ G+ P GI
Sbjct: 255 GILLWEIFSLGLNPYPGILV 274
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDN----IGSQYL----LNW 123
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 102 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 147
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 148 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 248
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 78 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 123
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 124 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 126
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 183
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 73
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R + D K
Sbjct: 134 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----K 185
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 186 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 172 IAVKVF--NLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228
+AVKV +L R P F+ E + A + H IV V+ G +V +++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP-LPYIVMEYV 98
Query: 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSN 288
+L + + + K+ +++ D AL + H Q I H ++KP+N
Sbjct: 99 DGVTLRDIVHTEGPMTP---------KRAIEVIADACQALNFSH---QNGIIHRDVKPAN 146
Query: 289 VLLDDEMIGHVGDFGMARFLPAIDKQN---RFICIKGSTGYIPPEYDLGCEASTYGDVYS 345
+++ V DFG+AR + D N + + G+ Y+ PE G DVYS
Sbjct: 147 IMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
Query: 346 FGILLLEMFTGIRPSDGIFTG 366
G +L E+ TG P FTG
Sbjct: 205 LGCVLYEVLTGEPP----FTG 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 71 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 116
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 117 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 76
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R + D K
Sbjct: 137 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----K 188
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 87 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 132
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 133 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 233
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 76
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R + D K
Sbjct: 137 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR-----K 188
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 83 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 128
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 129 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 185
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 186 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 229
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 80 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 125
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 126 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 172 IAVKVF--NLIR-PGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFM 228
+AVKV +L R P F+ E + A + H IV V+ G +V +++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP-LPYIVMEYV 115
Query: 229 PNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSN 288
+L + + + P+ K+ +++ D AL + H Q I H ++KP+N
Sbjct: 116 DGVTLRDIVHTEG-----PMT----PKRAIEVIADACQALNFSH---QNGIIHRDVKPAN 163
Query: 289 VLLDDEMIGHVGDFGMARFLPAIDKQN---RFICIKGSTGYIPPEYDLGCEASTYGDVYS 345
+++ V DFG+AR + D N + + G+ Y+ PE G DVYS
Sbjct: 164 IMISATNAVKVMDFGIARAI--ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 221
Query: 346 FGILLLEMFTGIRPSDGIFTG 366
G +L E+ TG P FTG
Sbjct: 222 LGCVLYEVLTGEPP----FTG 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 77
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H NL N ++ + +GDFGM R + D K
Sbjct: 138 AEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----K 189
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 190 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 76
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H NL N ++ + +GDFGM R + D K
Sbjct: 137 AEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----K 188
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 74 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 119
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 120 CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 176
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 177 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 220
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 41/231 (17%)
Query: 147 FSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----KH 200
F L+G G +G VY G + G A+KV ++ + + E K IN+ H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-----TGDEEEEIKQEINMLKKYSHH 80
Query: 201 RNIVRVFTAF-----SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIK 255
RNI + AF G+D Q +V +F GS+ + ++ + ++ +
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQ----LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICR 136
Query: 256 KKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQ 314
++ L +LH Q + H ++K NVLL + + DFG+ A+ + ++
Sbjct: 137 -------EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRR 186
Query: 315 NRFICIKGSTGYIPPEYDLGCEA---STY---GDVYSFGILLLEMFTGIRP 359
N FI G+ ++ PE + C+ +TY D++S GI +EM G P
Sbjct: 187 NTFI---GTPYWMAPEV-IACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 32/219 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFN---LIRPGGS----KSFKSECKAAINIKHRNIVR 205
+G G +VY L + T + +KV I P K F+ E + + H+NIV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ VD + + +V +++ +L E++ + PL+ + I + +
Sbjct: 76 MI----DVDEEDDCY-YLVMEYIEGPTLSEYIE-----SHGPLSVDTAI----NFTNQIL 121
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP--AIDKQNRFICIKGS 323
+++ H D + I H ++KP N+L+D + DFG+A+ L ++ + N + G+
Sbjct: 122 DGIKHAH-DMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL---GT 175
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
Y PE G D+YS GI+L EM G P +G
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG GNF V + G +A+K+ + + P + E + + H NIV++F
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + ++ ++ G + ++L + F + A++
Sbjct: 80 I-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---------QIVSAVQ 125
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + K + F C GS Y P
Sbjct: 126 YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF-C--GSPPYAAP 179
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 180 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 142 NATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFK-SECKAAINIK 199
++++ F +G G + +VY G G +A+K L G+ S E +K
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNW-RPLNFNFLIKKKL 258
H NIVR++ + +V++FM N L++++ + N R L N L+K
Sbjct: 62 HENIVRLYDVIHTENKL-----TLVFEFMDN-DLKKYMDSRTVGNTPRGLELN-LVKY-- 112
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNR 316
+ L + H + I H +LKP N+L++ +GDFG+AR +P N
Sbjct: 113 -FQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV----NT 164
Query: 317 FICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
F + Y P+ +G ST D++S G +L EM TG
Sbjct: 165 FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 26/223 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 66
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 67 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 116
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID+ N F+ G+
Sbjct: 117 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDEMANEFV---GT 169
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG--IRPSDGIF 364
Y+ PE G S D++S G+ L+EM G RP IF
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIF 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 33/224 (14%)
Query: 141 YNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVK---VFNLIRPGGSKSFKSECKAAI 196
YN F IG G F VY L DG +A+K +F+L+ E
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 197 NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256
+ H N+++ + +F + + L L D + + +F +K
Sbjct: 88 QLNHPNVIKYYASF-----------------IEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 257 KL-------DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
+L + + AL ++H + H ++KP+NV + + +GD G+ RF
Sbjct: 131 RLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ K + G+ Y+ PE + D++S G LL EM
Sbjct: 188 S--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 81 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 126
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 127 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 227
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 79 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 124
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 125 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-C--GSPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-C--GSPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++ L++LH I + +LK N+LLD + + DFGM + D + C
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC- 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ YI PE LG + + D +SFG+LL EM G P G
Sbjct: 180 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 9 DVYSFGILLLEMFTGLRP-----NDDMFNDELNLHNFVKSALPERAEEILDVVFFQEIEE 63
D +SFG+LL EM G P +++F+ + F L + A+++L +F +E E+
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEK 259
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP--LNFNF---- 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP L F+F
Sbjct: 92 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAR-----RPPGLEFSFNPSH 141
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 41/232 (17%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS---KSFKSECKAAINIKH 200
N ++IG GNFG V + DG + + + + F E + + H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 201 R-NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI----- 254
NI+ + A +++G + A+ Y P+G+L ++LR P F I
Sbjct: 82 HPNIINLLGA---CEHRGYLYLAIEYA--PHGNLLDFLRKSRVLETDPA---FAIANSTA 133
Query: 255 -----KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
++ L A DVA + YL Q H NL N+L+ + + + DFG++R
Sbjct: 134 STLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--- 187
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT 355
+ + +K + G +P + + E+ Y DV+S+G+LL E+ +
Sbjct: 188 -----GQEVYVKKTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFN--LIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG GNF V + G +A+K+ + + P + E + + H NIV++F
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + ++ ++ G + ++L + F + A++
Sbjct: 83 I-----ETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---------QIVSAVQ 128
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + K + F C G+ Y P
Sbjct: 129 YCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF-C--GAPPYAAP 182
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 183 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++G+G FG+VY G + I V + L P +K E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG A+ L A +K+
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEXSYDINRV 149
Query: 254 IKKKLDIAIDVACA---LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 41/254 (16%)
Query: 127 EGKQTINNP-SFKDLYNATNGFSSA---------NLIGAGNFGSVYNGTL-FDGTTIAVK 175
+G +T +P +F+D A F+ +IG G FG V +G L G
Sbjct: 1 QGVRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICV 60
Query: 176 VFNLIRPG----GSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNG 231
++ G + F SE H NI+ GV + ++ ++M NG
Sbjct: 61 AIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH----LEGV-VTKCKPVMIITEYMENG 115
Query: 232 SLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291
SL+ +LR D F + + + + + ++YL H +L N+L+
Sbjct: 116 SLDAFLRKNDG--------RFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILV 164
Query: 292 DDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIP-----PEYDLGCEASTYGDVYSF 346
+ ++ V DFGM+R L D +G G IP PE + ++ DV+S+
Sbjct: 165 NSNLVCKVSDFGMSRVLE--DDPEAAYTTRG--GKIPIRWTAPEAIAYRKFTSASDVWSY 220
Query: 347 GILLLEMFT-GIRP 359
GI++ E+ + G RP
Sbjct: 221 GIVMWEVMSYGERP 234
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLI-----GAGNFGSVYNGTLFD------GTTIAVKV 176
G +++ +FK L + F NL+ G G FG V T F TT+AVK+
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 177 FNL-IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEE 235
P + SE + H ++++++ A S Q +V ++ GSL
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRG 115
Query: 236 WLRGK-------------------DDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ 276
+LR D + R L LI A ++ ++YL +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYL---AE 168
Query: 277 PPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +L N+L+ + + DFG++R D +K S G IP ++ + E
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEEDSXVKRSQGRIPVKW-MAIE 222
Query: 337 A------STYGDVYSFGILLLEMFT-GIRPSDGI 363
+ +T DV+SFG+LL E+ T G P GI
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLI-----GAGNFGSVYNGTLFD------GTTIAVKV 176
G +++ +FK L + F NL+ G G FG V T F TT+AVK+
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 177 FNL-IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEE 235
P + SE + H ++++++ A S Q +V ++ GSL
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRG 115
Query: 236 WLRGK-------------------DDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ 276
+LR D + R L LI A ++ ++YL +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYL---AE 168
Query: 277 PPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +L N+L+ + + DFG++R D +K S G IP ++ + E
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEEDSXVKRSQGRIPVKW-MAIE 222
Query: 337 A------STYGDVYSFGILLLEMFT-GIRPSDGI 363
+ +T DV+SFG+LL E+ T G P GI
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 31/219 (14%)
Query: 150 ANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFT 208
++G G FG T + G + +K ++F E K ++H N+++
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK--- 71
Query: 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
F GV Y+ R + +++ G+L ++ D + +++ A D+A +
Sbjct: 72 -FIGVLYKDKRLNFIT-EYIKGGTLRGIIKSMDS--------QYPWSQRVSFAKDIASGM 121
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF-------------LPAIDKQN 315
YLH I H +L N L+ + V DFG+AR L D++
Sbjct: 122 AYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
R+ + G+ ++ PE G DV+SFGI+L E+
Sbjct: 179 RYTVV-GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 153 IGAGNFGSV----YNGTLFDGT--TIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVR 205
+G G+FG V Y+ T DGT +AVK P +K E + H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 206 VFTAFSGV-DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ G + QG + +V +++P GSL ++L + + + L A +
Sbjct: 81 ----YKGCCEDQGEKSLQLVMEYVPLGSLRDYLP----------RHSIGLAQLLLFAQQI 126
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
+ YLH H NL NVLLD++ + +GDFG+A+ +P + R + G +
Sbjct: 127 CEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 182
Query: 325 G--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE + DV+SFG+ L E+ T
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 169 GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV-----DYQGARFKAV 223
G AVK+ + S E + A + +I+R + Y+ + F +
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATR-RETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 224 VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCN 283
V+ M G L ++L K K+ I + A+ +LH + I H +
Sbjct: 178 VFDLMRKGELFDYLTEK---------VALSEKETRSIMRSLLEAVSFLHANN---IVHRD 225
Query: 284 LKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEAST---- 339
LKP N+LLDD M + DFG + L +K R +C G+ GY+ PE L C
Sbjct: 226 LKPENILLDDNMQIRLSDFGFSCHLEPGEKL-RELC--GTPGYLAPEI-LKCSMDETHPG 281
Query: 340 YG---DVYSFGILLLEMFTGIRP 359
YG D+++ G++L + G P
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPP 304
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AV++ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF-C--GSPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 56/274 (20%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLI-----GAGNFGSVYNGTLFD------GTTIAVKV 176
G +++ +FK L + F NL+ G G FG V T F TT+AVK+
Sbjct: 1 GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM 60
Query: 177 FNL-IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEE 235
P + SE + H ++++++ A S Q +V ++ GSL
Sbjct: 61 LKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS----QDGPLLLIV-EYAKYGSLRG 115
Query: 236 WLRGK-------------------DDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQ 276
+LR D + R L LI A ++ ++YL +
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI----SFAWQISQGMQYL---AE 168
Query: 277 PPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +L N+L+ + + DFG++R D +K S G IP ++ + E
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSR-----DVYEEDSYVKRSQGRIPVKW-MAIE 222
Query: 337 A------STYGDVYSFGILLLEMFT-GIRPSDGI 363
+ +T DV+SFG+LL E+ T G P GI
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD--TNWRPLNFNFL-IKKKL 258
N+V + A + G +V +F G+L +LR K + ++ L +FL ++ +
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
+ VA + +L H +L N+LL ++ + + DFG+AR + R
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG 204
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 75
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R + D K
Sbjct: 136 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----K 187
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 188 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 29/213 (13%)
Query: 153 IGAGNFGSV----YNGTLFDGT--TIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVR 205
+G G+FG V Y+ T DGT +AVK P +K E + H +I++
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 206 VFTAFSGV-DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ G + QG + +V +++P GSL ++L + + + L A +
Sbjct: 81 ----YKGCCEDQGEKSLQLVMEYVPLGSLRDYLP----------RHSIGLAQLLLFAQQI 126
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
+ YLH H NL NVLLD++ + +GDFG+A+ +P + R + G +
Sbjct: 127 CEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 182
Query: 325 G--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE + DV+SFG+ L E+ T
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 76
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R + D K
Sbjct: 137 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR-----K 188
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 50 IGKGRFGEVWRGK-WRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG-FIAADN 106
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 156
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 213
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 37 IGKGRFGEVWRGK-WRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG-FIAADN 93
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 143
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 200
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG-FIAADN 68
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 118
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 175
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 90
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 91 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 140
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 141 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 193
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++ +G FG+VY G + I V + L P +K E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++ L++LH I + +LK N+LLD + + DFGM + D + C
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC- 180
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ YI PE LG + + D +SFG+LL EM G P G
Sbjct: 181 -GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 17 IGKGRFGEVWRGK-WRGEEVAVKIFS-SREERSWFREAEIYQTVMLRHENILG-FIAADN 73
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 123
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 180
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKS----FKSECKAAINIKHRNIVRVFT 208
IG G+F +VY G L TT+ V L +KS FK E + ++H NIVR +
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL-IKKKLDIAIDVACA 267
++ +G + +V + +G+L+ +L+ F IK +
Sbjct: 93 SWEST-VKGKKCIVLVTELXTSGTLKTYLK----------RFKVXKIKVLRSWCRQILKG 141
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTGY 326
L++LH PPI H +LK N+ + +GD G+A + + + + G+ +
Sbjct: 142 LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA----TLKRASFAKAVIGTPEF 196
Query: 327 IPPE-YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
PE Y+ + S DVY+FG LE T P
Sbjct: 197 XAPEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++ +G FG+VY G + I V + L P +K E ++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 77 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 122
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 123 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 67
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 117
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 174
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AV++ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-C--GSPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
IG G FG V+ G + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 14 IGKGRFGEVWRGK-WRGEEVAVKIFSS-REERSWFREAEIYQTVMLRHENILG-FIAADN 70
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
D +V + +GSL ++L + ++ + +A+ A L +LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYLN----------RYTVTVEGMIKLALSTASGLAHLH 120
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAID----KQNRFICIKG 322
+ +P IAH +LK N+L+ + D G+A R A D N + G
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV---G 177
Query: 323 STGYIPPEYDLGC------EASTYGDVYSFGILLLEM 353
+ Y+ PE E+ D+Y+ G++ E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 153 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVR 205
+G G+FG V Y+ T DGT V V L P ++ E + + H +IV+
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 206 VFTAFSGV-DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ G + QG + +V +++P GSL ++L P + L + L A +
Sbjct: 76 ----YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLL-FAQQI 121
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
+ YLH H L NVLLD++ + +GDFG+A+ +P + R + G +
Sbjct: 122 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 177
Query: 325 G--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE C+ DV+SFG+ L E+ T
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + S K E + + H NIV++F
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 75 I-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---------QIVSAVQ 120
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C GS Y P
Sbjct: 121 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF-C--GSPPYAAP 174
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 175 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 153 IGAGNFGSV----YNGTLFDGTTIAVKVFNLIR---PGGSKSFKSECKAAINIKHRNIVR 205
+G G+FG V Y+ T DGT V V L P ++ E + + H +IV+
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 206 VFTAFSGV-DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ G + QG + +V +++P GSL ++L P + L + L A +
Sbjct: 75 ----YKGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLL-FAQQI 120
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
+ YLH H L NVLLD++ + +GDFG+A+ +P + R + G +
Sbjct: 121 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDS 176
Query: 325 G--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE C+ DV+SFG+ L E+ T
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 82
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 83 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 132
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 133 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 185
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 125
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 126 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 175
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 176 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 228
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLF---DGTTIAVKVFNL---IRPGGSKSFKSECKAAINIKH 200
F ++ +G FG+VY G + I V + L P +K E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++ R+ Q ++ + MP G L +++R D + +L L+
Sbjct: 84 PHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDN----IGSQYL----LNW 129
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ +A + YL + H +L NVL+ + DFG+A+ L A +K+
Sbjct: 130 CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD +M + DFG + +K + F C G+ Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF-C--GAPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIIHLLGACTQ---DGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 63
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 64 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 113
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 166
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 63
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 64 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 113
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 166
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 63
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 64 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 113
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 166
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 63
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 64 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 113
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 166
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 173 AVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV-----DYQGARFKAVVYKF 227
AVK+ ++ G + + + +K +I+R + + Y+ F +V+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287
M G L ++L K + + +K + ++V CAL L+ I H +LKP
Sbjct: 106 MKKGELFDYLTEKVTLSEKE------TRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 288 NVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEAST----YG-- 341
N+LLDD+M + DFG F +D + + G+ Y+ PE + C + YG
Sbjct: 154 NILLDDDMNIKLTDFG---FSCQLDPGEKLRSVCGTPSYLAPEI-IECSMNDNHPGYGKE 209
Query: 342 -DVYSFGILLLEMFTGIRP 359
D++S G+++ + G P
Sbjct: 210 VDMWSTGVIMYTLLAGSPP 228
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V+ + G +A K+ +L I+P + +++ + + H
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP----AIRNQIIRELQVLHECNS 63
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ + L ++I V
Sbjct: 64 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKKAGRIPEQILG---------KVSIAV 113
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL + I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 114 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 166
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+EM G P
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 27/228 (11%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD--TNWRPLNF--NFL-IKK 256
N+V + A + G +V +F G+L +LR K + ++P + +FL ++
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316
+ + VA + +L H +L N+LL ++ + + DFG+AR + R
Sbjct: 150 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 184
K TIN +DL + +IG G FG V + T + F +I+
Sbjct: 55 KDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 112
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
S F E +V++F AF Q R+ +V ++MP G L + D
Sbjct: 113 SAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD--- 164
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
P + ++ +A+D ++ ++H D +KP N+LLD + DFG
Sbjct: 165 -VPEKWARFYTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGT 214
Query: 305 ARFLPAIDKQNRFIC--IKGSTGYIPPEYDLGCEAST--YG---DVYSFGILLLEMFTGI 357
++K+ C G+ YI PE L + YG D +S G+ L EM G
Sbjct: 215 CM---KMNKEGMVRCDTAVGTPDYISPEV-LKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270
Query: 358 RP 359
P
Sbjct: 271 TP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 184
K TIN +DL + +IG G FG V + T + F +I+
Sbjct: 60 KDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
S F E +V++F AF Q R+ +V ++MP G L + D
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD--- 169
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
P + ++ +A+D ++ ++H D +KP N+LLD + DFG
Sbjct: 170 -VPEKWARFYTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGT 219
Query: 305 ARFLPAIDKQNRFIC--IKGSTGYIPPEYDLGCEAST--YG---DVYSFGILLLEMFTGI 357
++K+ C G+ YI PE L + YG D +S G+ L EM G
Sbjct: 220 CM---KMNKEGMVRCDTAVGTPDYISPEV-LKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
Query: 358 RP 359
P
Sbjct: 276 TP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 35/242 (14%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGG 184
K TIN +DL + +IG G FG V + T + F +I+
Sbjct: 60 KDTIN--KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD 117
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
S F E +V++F AF Q R+ +V ++MP G L + D
Sbjct: 118 SAFFWEERDIMAFANSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD--- 169
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM 304
P + ++ +A+D ++ ++H D +KP N+LLD + DFG
Sbjct: 170 -VPEKWARFYTAEVVLALDAIHSMGFIHRD---------VKPDNMLLDKSGHLKLADFGT 219
Query: 305 ARFLPAIDKQNRFIC--IKGSTGYIPPEYDLGCEAST--YG---DVYSFGILLLEMFTGI 357
++K+ C G+ YI PE L + YG D +S G+ L EM G
Sbjct: 220 CM---KMNKEGMVRCDTAVGTPDYISPEV-LKSQGGDGYYGRECDWWSVGVFLYEMLVGD 275
Query: 358 RP 359
P
Sbjct: 276 TP 277
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 35/229 (15%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS---KSFKSECKAAINIKH 200
N ++IG GNFG V + DG + + + + F E + + H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 201 R-NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP-------LNFNF 252
NI+ + A +++G + A+ Y P+G+L ++LR P
Sbjct: 85 HPNIINLLGA---CEHRGYLYLAIEYA--PHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
++ L A DVA + YL Q H +L N+L+ + + + DFG++R
Sbjct: 140 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 190
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT 355
+ + +K + G +P + + E+ Y DV+S+G+LL E+ +
Sbjct: 191 --GQEVYVKKTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIITLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 35/229 (15%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLF-DGTTIAVKVFNLIRPGGS---KSFKSECKAAINIKH 200
N ++IG GNFG V + DG + + + + F E + + H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 201 R-NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP-------LNFNF 252
NI+ + A +++G + A+ Y P+G+L ++LR P
Sbjct: 75 HPNIINLLGA---CEHRGYLYLAIEYA--PHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
++ L A DVA + YL Q H +L N+L+ + + + DFG++R
Sbjct: 130 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 180
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTY------GDVYSFGILLLEMFT 355
+ + +K + G +P + + E+ Y DV+S+G+LL E+ +
Sbjct: 181 --GQEVYVKKTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 36/264 (13%)
Query: 123 TPVYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAV 174
TP+ G P + + +G G FG V + T+AV
Sbjct: 5 TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 64
Query: 175 KVFNLIRPGGSKSFKSECKAAINI-----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMP 229
K +++ ++ S+ + + + KH+NI+ + A + G + V+ ++
Sbjct: 65 K---MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT---QDGPLY--VIVEYAS 116
Query: 230 NGSLEEWLRGKDDTNWRP------LNFNFLIKKKLDIAIDVACAL---RYLHCDCQPPIA 280
G+L E+LR + RP + N + ++++ V+C R +
Sbjct: 117 KGNLREYLRAR-----RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 171
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L NVL+ + + + DFG+AR + ID + + ++ PE +
Sbjct: 172 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 231
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+L+ E+FT G P GI
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGI 255
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGG--SKSFKSECKAAINIKHRNIVRVFTAF 210
+G+G FG V G +AVK +I+ G F E + + + H +V+ +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK---MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
S +Y +V +++ NG L +LR ++ + L + L L++ DV + +
Sbjct: 73 SK-EYP----IYIVTEYISNGCLLNYLR----SHGKGLEPSQL----LEMCYDVCEGMAF 119
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE 330
L H +L N L+D ++ V DFGM R++ D+ + K + PE
Sbjct: 120 LESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPE 175
Query: 331 YDLGCEASTYGDVYSFGILLLEMFT-GIRPSD 361
+ S+ DV++FGIL+ E+F+ G P D
Sbjct: 176 VFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
+G G+FG VY G D T +AVK N S S + + + ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-----ESASLRERIEF---LNEASVMKG 76
Query: 207 FTAFSGVDYQGARFKA----VVYKFMPNGSLEEWLRG-KDDTNWRPLNFNFLIKKKLDIA 261
FT V G K VV + M +G L+ +LR + + P +++ + +A
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
++A + YL+ H +L N ++ + +GDFGM R D K
Sbjct: 137 AEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRK 188
Query: 322 GSTGYIP-----PEYDLGCEASTYGDVYSFGILLLEM 353
G G +P PE +T D++SFG++L E+
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVK-VFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V D G +A+K + P + + E + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 211 SGVDYQGAR-FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI-DVACAL 268
G+ + ++ G L ++L + N L + + + D++ AL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSAL 135
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
RYLH + I H +LKP N++L +I + D G A+ L + F+ G+
Sbjct: 136 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQ 189
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE + + D +SFG L E TG RP
Sbjct: 190 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 20/214 (9%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVK-VFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G FG V D G +A+K + P + + E + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 211 SGVDYQGAR-FKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI-DVACAL 268
G+ + ++ G L ++L + N L + + + D++ AL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFE-------NCCGLKEGPIRTLLSDISSAL 134
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLD---DEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
RYLH + I H +LKP N++L +I + D G A+ L + F+ G+
Sbjct: 135 RYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQ 188
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE + + D +SFG L E TG RP
Sbjct: 189 YLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 25/226 (11%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD--TNWRPLNFNFLIKKKLD 259
N+V + A + G +V +F G+L +LR K + ++ L +FL + L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 260 I-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
+ VA + +L H +L N+LL ++ + + DFG+AR + R
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 204
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG----GSKSFKSECKAAINIKHRNIVR 205
+IG G FG V +G L G ++ G + F SE H NI+
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
GV + ++ ++M NGSL+ +LR D F + + + + +
Sbjct: 80 ----LEGV-VTKCKPVMIITEYMENGSLDAFLRKNDG--------RFTVIQLVGMLRGIG 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL H +L N+L++ ++ V DFGM+R L D +G G
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE--DDPEAAYTTRG--G 179
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE + ++ DV+S+GI++ E+ + G RP
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 87 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 136
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 137 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINN 196
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 31/220 (14%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPG----GSKSFKSECKAAINIKHRNIVR 205
+IG G FG V +G L G ++ G + F SE H NI+
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
GV + ++ ++M NGSL+ +LR D F + + + + +
Sbjct: 74 ----LEGV-VTKCKPVMIITEYMENGSLDAFLRKNDG--------RFTVIQLVGMLRGIG 120
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL H +L N+L++ ++ V DFGM+R L D +G G
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE--DDPEAAYTTRG--G 173
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE + ++ DV+S+GI++ E+ + G RP
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 89 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 138
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 139 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 198
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 252
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 173 AVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV-----DYQGARFKAVVYKF 227
AVK+ ++ G + + + +K +I+R + + Y+ F +V+
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287
M G L ++L K + + +K + ++V CAL L+ I H +LKP
Sbjct: 93 MKKGELFDYLTEKVTLSEKE------TRKIMRALLEVICALHKLN------IVHRDLKPE 140
Query: 288 NVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEAST----YG-- 341
N+LLDD+M + DFG F +D + + G+ Y+ PE + C + YG
Sbjct: 141 NILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAPEI-IECSMNDNHPGYGKE 196
Query: 342 -DVYSFGILLLEMFTGIRP 359
D++S G+++ + G P
Sbjct: 197 VDMWSTGVIMYTLLAGSPP 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ + G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVAYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 36/264 (13%)
Query: 123 TPVYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLF--------DGTTIAV 174
TP+ G P + + +G G FG V + T+AV
Sbjct: 59 TPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV 118
Query: 175 KVFNLIRPGGSKSFKSECKAAINI-----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMP 229
K +++ ++ S+ + + + KH+NI+ + A + G + V+ ++
Sbjct: 119 K---MLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYAS 170
Query: 230 NGSLEEWLRGKDDTNWRP------LNFNFLIKKKLDIAIDVACAL---RYLHCDCQPPIA 280
G+L E+LR + RP + N + ++++ V+C R +
Sbjct: 171 KGNLREYLRAR-----RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI 225
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L NVL+ + + + DFG+AR + ID + + ++ PE +
Sbjct: 226 HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 285
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+L+ E+FT G P GI
Sbjct: 286 SDVWSFGVLMWEIFTLGGSPYPGI 309
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 28/199 (14%)
Query: 173 AVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGV-----DYQGARFKAVVYKF 227
AVK+ ++ G + + + +K +I+R + + Y+ F +V+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 228 MPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287
M G L ++L K + + +K + ++V CAL L+ I H +LKP
Sbjct: 106 MKKGELFDYLTEKVTLSEKE------TRKIMRALLEVICALHKLN------IVHRDLKPE 153
Query: 288 NVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEAST----YG-- 341
N+LLDD+M + DFG F +D + + G+ Y+ PE + C + YG
Sbjct: 154 NILLDDDMNIKLTDFG---FSCQLDPGEKLREVCGTPSYLAPEI-IECSMNDNHPGYGKE 209
Query: 342 -DVYSFGILLLEMFTGIRP 359
D++S G+++ + G P
Sbjct: 210 VDMWSTGVIMYTLLAGSPP 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD----DTNWRPLN---FN 251
KH+NI+ + A + G + V+ ++ G+L E+L+ ++ + ++ P +
Sbjct: 92 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 252 FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
K + A VA + YL H +L NVL+ ++ + + DFG+AR + I
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
D + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 21/215 (9%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNIV 204
+++ +IG G+FG V+ L + +A+K + K FK+ E + +KH N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK-----KVLQDKRFKNRELQIMRIVKHPNVV 95
Query: 205 RVFTAF-SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
+ F S D + F +V +++P P+ LIK +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYM---YQ 149
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEM-IGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +L Y+H I H ++KP N+LLD + + DFG A+ L A + IC
Sbjct: 150 LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--- 203
Query: 323 STGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
S Y PE G T D++S G ++ E+ G
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTT---IAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVR 205
+IGAG FG V +G L G +A+K + + F E H NI+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
GV ++ +V ++M NGSL+ +L+ D F + + + + ++
Sbjct: 88 ----LEGV-VTKSKPVMIVTEYMENGSLDTFLKKNDG--------QFTVIQLVGMLRGIS 134
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL H +L N+L++ ++ V DFG++R L D +G G
Sbjct: 135 AGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE--DDPEAAYTTRG--G 187
Query: 326 YIP-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRP 359
IP PE + ++ DV+S+GI++ E+ + G RP
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ ++ G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF------ 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 133 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYSYNPSH 182
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 183 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 153 IGAGNFGSVYNGTLF--------DGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----K 199
+G G FG V + T+AVK +++ ++ S+ + + + K
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK---MLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP------LNFNFL 253
H+NI+ + A + G + V+ + G+L E+LR + RP + N +
Sbjct: 100 HKNIINLLGACT---QDGPLY--VIVGYASKGNLREYLRAR-----RPPGMEYSYDINRV 149
Query: 254 IKKKLDIAIDVACAL---RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
++++ V+C R + H +L NVL+ + + + DFG+AR +
Sbjct: 150 PEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ID + + ++ PE + DV+SFG+L+ E+FT G P GI
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF------ 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 84 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYSYNPSH 133
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 134 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTA 209
IG G F V L G A K+ N + K E +A I +KH NIVR+ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
S +G F +V+ + G L E + ++ + + + I++ L+
Sbjct: 72 ISE---EG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAV-------- 116
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFICIKGSTGY 326
LHC Q + H +LKP N+LL + G + DFG+A + Q + G+ GY
Sbjct: 117 -LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ PE YG D+++ G++L + G P
Sbjct: 173 LSPEV---LRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF------ 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 92 KHKNIINLLGACT---QDGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYSYNPSH 141
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YL I H ++KP N+LLD+ H+ DF +A LP ++ + + G
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAG 176
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE + + Y D +S G+ E+ G RP
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI---- 254
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 77 KHKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYCYNPSH 126
Query: 255 --------KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
K + A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 153 IGAGNFGSVYN-GTLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G++G DG + K + + + SE +KH NIVR +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWL-RGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
+D +V ++ G L + +G + + F + +L +A+ C
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK-ECHR 129
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIKGSTGYI 327
R D + H +LKP+NV LD + +GDFG+AR L D F+ G+ Y+
Sbjct: 130 R---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV---GTPYYM 183
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
PE + D++S G LL E+ + P
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF------ 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 85 KHKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYSYNPSH 134
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 135 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF------ 252
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 81 KHKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYSYNPSH 130
Query: 253 -----LIKKKL-DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
L K L A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 131 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI---- 254
KH+NI+ + A + G + V+ ++ G+L E+L+ + RP +
Sbjct: 92 KHKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAR-----RPPGLEYCYNPSH 141
Query: 255 --------KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
K + A VA + YL H +L NVL+ ++ + + DFG+AR
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 307 FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ ID + + ++ PE + DV+SFG+LL E+FT G P G+
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K+FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + +IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 39/238 (16%)
Query: 153 IGAGNFGSVYNG------TLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
IG G FG V+ T +AVK+ ++ F+ E + NIV+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK--------- 256
+ GV G + +++++M G L E+LR L+ + L +
Sbjct: 115 LL----GVCAVG-KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 257 ------KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
+L IA VA + YL + H +L N L+ + M+ + DFG++R + +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 311 ID----KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
D N I I+ ++PPE +T DV+++G++L E+F+ G++P G+
Sbjct: 227 ADYYKADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K+FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + +IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 105/242 (43%), Gaps = 43/242 (17%)
Query: 151 NLIGAGNFGSVYNGTLF----DGTTIAVKVFNLIRPGGS---KSFKSECKAAINI-KHRN 202
++G+G FG V N T + G +I V V L S ++ SE K + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 203 IVRVFTA--FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDT---------NWRPL--- 248
IV + A SG Y +++++ G L +LR K + N + L
Sbjct: 111 IVNLLGACTLSGPIY-------LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 249 -NFNFL-IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
+ N L + L A VA + +L H +L NVL+ + + DFG+AR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 307 FLPA----IDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSD 361
+ + + + N + +K ++ PE + DV+S+GILL E+F+ G+ P
Sbjct: 221 DIMSDSNYVVRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
Query: 362 GI 363
GI
Sbjct: 277 GI 278
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 27/148 (18%)
Query: 223 VVYKFMPNGSLEEW-----LRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQP 277
++Y++M N S+ ++ + K+ T + P+ +IK I V + Y+H +
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ---VIKC---IIKSVLNSFSYIHN--EK 171
Query: 278 PIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG---YIPPEYDLG 334
I H ++KPSN+L+D + DFG + ++ +DK+ IKGS G ++PPE+
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDFGESEYM--VDKK-----IKGSRGTYEFMPPEF-FS 223
Query: 335 CEASTYG---DVYSFGILLLEMFTGIRP 359
E+S G D++S GI L MF + P
Sbjct: 224 NESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 29/213 (13%)
Query: 153 IGAGNFGSV----YNGTLFDGT--TIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIVR 205
+G G+FG V Y+ T DGT +AVK P +K E + H +I++
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 206 VFTAFSGV-DYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ G + GA +V +++P GSL ++L + + + L A +
Sbjct: 98 ----YKGCCEDAGAASLQLVMEYVPLGSLRDYLP----------RHSIGLAQLLLFAQQI 143
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST 324
+ YLH H +L NVLLD++ + +GDFG+A+ +P + R + G +
Sbjct: 144 CEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR-VREDGDS 199
Query: 325 G--YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
+ PE + DV+SFG+ L E+ T
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ IG G+FG V+ G D T V +I ++ + + I + +
Sbjct: 25 FTKLERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G +G++ ++ +++ GS + LR P + F I L ++
Sbjct: 83 VTKYYGSYLKGSKL-WIIMEYLGGGSALDLLRAG------PFD-EFQIATMLK---EILK 131
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL ++ + DFG+A L K+N F+ G+
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV---GTPF 185
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPS 360
++ PE + D++S GI +E+ G P+
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPN 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 96/229 (41%), Gaps = 34/229 (14%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI--- 260
VR+ F Y K VVY L L +T +R K+ L +
Sbjct: 76 VRLRYFF----YSSGEKKDVVY-------LNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 261 ---AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNR 316
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 125 KLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 317 FICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
IC S Y PE G T DV+S G +L E+ G I P D
Sbjct: 182 XIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + IG+G +GSV FD T + V V L RP S K E
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 78 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 120
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 178 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 24/216 (11%)
Query: 147 FSSANLIGAGNFGSVYN-GTLFDGTTIAVKVFNL-IRPGGSKSFKSECKAAINIKHRNIV 204
F + +GAGN G V G +A K+ +L I+P + +++ + + H
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKP----AIRNQIIRELQVLHECNS 73
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
F G Y ++ + M GSL++ L+ L ++I V
Sbjct: 74 PYIVGFYGAFYSDGEI-SICMEHMDGGSLDQVLKEAKRIPEEILG---------KVSIAV 123
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGS 323
L YL Q I H ++KPSN+L++ + DFG++ L ID N F+ G+
Sbjct: 124 LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV---GT 176
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
Y+ PE G S D++S G+ L+E+ G P
Sbjct: 177 RSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 1 GSHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 58
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 101
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 158
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 159 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 214 IMAELLTG 221
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + +IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 88
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 144
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + +IC
Sbjct: 145 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 197
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 198 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAV-KVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY + + +A KV + + + E + H NIV++ AF
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL---NFNFLIKKKLDIAIDVACAL 268
Y+ + ++ +F G+++ + + RPL + K+ LD AL
Sbjct: 105 ---YENNLW--ILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLD-------AL 148
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYI 327
YLH + I H +LK N+L + + DFG+ A+ I +++ FI G+ ++
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWM 202
Query: 328 PPEYDLGCEAST------YGDVYSFGILLLEM 353
PE + CE S DV+S GI L+EM
Sbjct: 203 APEV-VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 58
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 101
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 158
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 159 AVNEDSELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 214 IMAELLTG 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 68
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 111
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 168
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 169 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 224 IMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 68
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 111
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 168
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 169 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 224 IMAELLTG 231
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAV-KVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY + + +A KV + + + E + H NIV++ AF
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL---NFNFLIKKKLDIAIDVACAL 268
Y+ + ++ +F G+++ + + RPL + K+ LD AL
Sbjct: 105 ---YENNLW--ILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLD-------AL 148
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYI 327
YLH + I H +LK N+L + + DFG+ A+ I +++ FI G+ ++
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWM 202
Query: 328 PPEYDLGCEAST------YGDVYSFGILLLEM 353
PE + CE S DV+S GI L+EM
Sbjct: 203 APEV-VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 80 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 122
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 180 RH--TADEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 80 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 122
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 180 RH--TADEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 58
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 101
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 158
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 159 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 214 IMAELLTG 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 80 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 122
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 180 RH--TADEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 91/219 (41%), Gaps = 34/219 (15%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK--SECKAAINIKHRNIVRVFTA 209
IG GNF V + G +AVK+ + + S K E + + H NIV++F
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
+ + +V ++ G + ++L + F + A++
Sbjct: 82 I-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---------QIVSAVQ 127
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPP 329
Y H Q I H +LK N+LLD + + DFG + +K + F C G+ Y P
Sbjct: 128 YCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF-C--GAPPYAAP 181
Query: 330 E------YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
E YD G E DV+S G++L + +G P DG
Sbjct: 182 ELFQGKKYD-GPEV----DVWSLGVILYTLVSGSLPFDG 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAV-KVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY + + +A KV + + + E + H NIV++ AF
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL---NFNFLIKKKLDIAIDVACAL 268
Y+ + ++ +F G+++ + + RPL + K+ LD AL
Sbjct: 105 ---YENNLW--ILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLD-------AL 148
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYI 327
YLH + I H +LK N+L + + DFG+ A+ I +++ FI G+ ++
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWM 202
Query: 328 PPEYDLGCEAST------YGDVYSFGILLLEM 353
PE + CE S DV+S GI L+EM
Sbjct: 203 APEV-VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 80
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 136
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + +IC
Sbjct: 137 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-- 189
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 190 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 78 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 120
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 178 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 103
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 151
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 152 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 208
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
+IC S Y PE G T DV+S G +L E+ G
Sbjct: 209 SYIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDL-GCEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 84 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 126
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 127 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 184 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 1 GPMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 58
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
RP S K E + ++KH N++ + F+ P SLEE+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 101
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 102 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 158
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 159 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 214 IMAELLTG 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 15/212 (7%)
Query: 153 IGAGNFGSVYN-GTLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G++G DG + K + + + SE +KH NIVR +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWL-RGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
+D +V ++ G L + +G + + F + +L +A+ C
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK-ECHR 129
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI-CIKGSTGYI 327
R D + H +LKP+NV LD + +GDFG+AR L + F G+ Y+
Sbjct: 130 R---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKAFVGTPYYM 183
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
PE + D++S G LL E+ + P
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 15/212 (7%)
Query: 153 IGAGNFGSVYN-GTLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G++G DG + K + + + SE +KH NIVR +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWL-RGKDDTNWRPLNFNFLIKKKLDIAIDVACAL 268
+D +V ++ G L + +G + + F + +L +A+ C
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK-ECHR 129
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI-CIKGSTGYI 327
R D + H +LKP+NV LD + +GDFG+AR L + F G+ Y+
Sbjct: 130 R---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSFAKTFVGTPYYM 183
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
PE + D++S G LL E+ + P
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 79 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 121
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 179 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 44/241 (18%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGS-- 185
+Q +N K ++ + + + +G+G +GSV + + G IAVK L RP S
Sbjct: 39 RQELN----KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVK--KLSRPFQSII 92
Query: 186 --KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDT 243
K E + ++KH N++ + F+ P SLEE+ T
Sbjct: 93 HAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PATSLEEFNDVYLVT 135
Query: 244 NWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296
+ + N ++K +KL + + L+Y+H I H +LKPSN+ ++++
Sbjct: 136 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCE 192
Query: 297 GHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFT 355
+ DFG+AR D+ ++ + Y PE L + D++S G ++ E+ T
Sbjct: 193 LKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 356 G 356
G
Sbjct: 248 G 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 109
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 157
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
+IC S Y PE G T DV+S G +L E+ G
Sbjct: 215 SYIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 154
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 202
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 203 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 259
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
+IC S Y PE G T DV+S G +L E+ G
Sbjct: 260 SYIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 113
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 161
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 162 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 218
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
+IC S Y PE G T DV+S G +L E+ G
Sbjct: 219 SYIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
+G G +G V+ G+ + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 72
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKD-DTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
+ ++ + GSL ++L+ DT L I + +A L +L
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----------VSCLRIVLSIASGLAHL 121
Query: 272 HCDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-----NRFICIK 321
H + +P IAH +LK N+L+ + D G+A Q N +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV--- 178
Query: 322 GSTGYIPPEY-----DLGC-EASTYGDVYSFGILLLEM 353
G+ Y+ PE + C ++ D+++FG++L E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 111
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 159
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 160 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 216
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
+IC S Y PE G T DV+S G +L E+ G
Sbjct: 217 SYIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 34/218 (15%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
+G G +G V+ G+ + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 16 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 72
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKD-DTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
+ ++ + GSL ++L+ DT L I + +A L +L
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT-----------VSCLRIVLSIASGLAHL 121
Query: 272 HCDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-----NRFICIK 321
H + +P IAH +LK N+L+ + D G+A Q N +
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV--- 178
Query: 322 GSTGYIPPEY-----DLGC-EASTYGDVYSFGILLLEM 353
G+ Y+ PE + C ++ D+++FG++L E+
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
+ CA+ Y H + I H +LKP N+LLDD + + DFG++ + N GS
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM---TDGNFLKTSCGS 170
Query: 324 TGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSDGIF 364
Y PE G A DV+S GI+L M G P D F
Sbjct: 171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 78 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 120
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 178 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 72 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 114
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 115 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 172 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSG 212
+G G +G V+ G+ + G +AVK+F+ R S ++E + ++H NI+ F A
Sbjct: 45 VGKGRYGEVWRGS-WQGENVAVKIFS-SRDEKSWFRETELYNTVMLRHENILG-FIASDM 101
Query: 213 VDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLH 272
+ ++ + GSL ++L+ L I + +A L +LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLT----------TLDTVSCLRIVLSIASGLAHLH 151
Query: 273 CDC-----QPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-----NRFICIKG 322
+ +P IAH +LK N+L+ + D G+A Q N + G
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV---G 208
Query: 323 STGYIPPEY-----DLGC-EASTYGDVYSFGILLLEM 353
+ Y+ PE + C ++ D+++FG++L E+
Sbjct: 209 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 79 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 121
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 179 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 80 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 122
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 123 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 180 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 28/229 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 92
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD-----TNWRPLNFNFLIKK 256
N+V + A + G +V +F G+L +LR K + L +FL +
Sbjct: 93 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 257 KLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN 315
L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 93 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 135
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 136 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 193 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 96 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 138
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 139 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 196 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 84 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 126
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 127 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 184 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 92 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 134
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 135 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 192 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 79 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 121
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 122 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 179 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 78 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 120
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 121 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 178 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
+ L +LH Q I + +LKP NVLLDD+ + D G+A L A Q + G+
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAGT 352
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G++ PE LG E D ++ G+ L EM P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
+ L +LH Q I + +LKP NVLLDD+ + D G+A L A Q + G+
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAGT 352
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G++ PE LG E D ++ G+ L EM P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
+ L +LH Q I + +LKP NVLLDD+ + D G+A L A Q + G+
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAGT 352
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G++ PE LG E D ++ G+ L EM P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 70 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 112
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 113 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 170 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 41/227 (18%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-----FLP 309
+ + C +++LH I H +LKPSN+++ + + DFG+AR F+
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
+ R+ Y PE LG D++S G ++ EM G
Sbjct: 183 TPEVVTRY--------YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G+++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 76
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 77 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 132
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 133 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 185
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 186 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTA 209
+G G F V + G A K+ N + K E +A I +KH NIVR+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
S +G + +++ + G L E + ++ + + + I++ L+
Sbjct: 90 ISE---EGHHY--LIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAV-------- 134
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFICIKGSTGY 326
LHC Q + H +LKP N+LL ++ G + DFG+A + +Q + G+ GY
Sbjct: 135 -LHCH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGY 190
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ PE YG D+++ G++L + G P
Sbjct: 191 LSPEV---LRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 96 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 138
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 139 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 196 RH--TDDEMXGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 70 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 112
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 113 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 170 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 52/239 (21%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNI 203
F ++G G FG V D A+K IR K + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 204 VRVFTAF----------SGVDYQGARFKAVVYKFMPNGSL-----EEWLRGKDDTNWRPL 248
VR + A+ + V + F + ++ NG+L E L + D WR
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENGTLYDLIHSENLNQQRDEYWR-- 120
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308
L ++ L+ AL Y+H I H +LKP N+ +D+ +GDFG+A+ +
Sbjct: 121 ----LFRQILE-------ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 309 P------AIDKQN------RFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLEMF 354
+D QN G+ Y+ E D + D+YS GI+ EM
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 71 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 113
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 114 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 171 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 69 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 111
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 112 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 169 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 11 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 127
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 184
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
F+ + Y PE LG D++S G ++ EM G
Sbjct: 185 VPFVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
+ L +LH Q I + +LKP NVLLDD+ + D G+A L A Q + G+
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAGT 352
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G++ PE LG E D ++ G+ L EM P
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 46/248 (18%)
Query: 128 GKQTINNPSF------KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLI 180
G + P+F K ++ + + + +G+G +GSV FD T + V V L
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLS 68
Query: 181 RPGGS----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEW 236
+P S K E + ++KH N++ + F+ P SLEE+
Sbjct: 69 KPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEF 111
Query: 237 LRGKDDTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNV 289
T+ + N ++K +KL + + L+Y+H I H +LKPSN+
Sbjct: 112 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNL 168
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGI 348
++++ + DFG+AR D+ ++ + Y PE L + D++S G
Sbjct: 169 AVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 349 LLLEMFTG 356
++ E+ TG
Sbjct: 224 IMAELLTG 231
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 113
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ F+ + Y PE L + D++S G ++ E+ TG
Sbjct: 171 LARH--TDDEMAGFVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 48/243 (19%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS 185
+Q +N K ++ + + + +G+G +GSV FD G +AVK L RP S
Sbjct: 10 RQELN----KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQS 61
Query: 186 ----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD 241
K E + ++KH N++ + F+ P SLEE+
Sbjct: 62 IIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYL 104
Query: 242 DTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
T+ + N ++K +KL + + L+Y+H I H +LKPSN+ ++++
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 161
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEM 353
+ DFG+AR D+ F+ + Y PE L + D++S G ++ E+
Sbjct: 162 CELKILDFGLARH--TDDEMAGFVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 354 FTG 356
TG
Sbjct: 217 LTG 219
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K+FK+ E + + H NI
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKLDHCNI 75
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL---- 131
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 132 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 184
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 185 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 94
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 150
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 151 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 203
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 204 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 79
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 136 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 189 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G +V +F G+L +LR K + L +FL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 24/224 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 83
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 140 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG--IRPSDG 362
S Y PE G T DV+S G +L E+ G I P D
Sbjct: 193 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G +G VY G +A+K L G + E + H NIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
R +V++FM E+ L+ D N L + I I + LR
Sbjct: 89 -----HSERCLTLVFEFM-----EKDLKKVLDENKTGLQDS-------QIKIYLYQLLRG 131
Query: 271 L-HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYI 327
+ HC Q I H +LKP N+L++ + + DFG+AR +P + + + Y
Sbjct: 132 VAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL----WYR 186
Query: 328 PPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
P+ +G + ST D++S G + EM TG
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 35/242 (14%)
Query: 140 LYNATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAV-KVFNLIRPGGSKSFKSECKAAIN 197
+YN ++ F +L+G G +G V + T G +A+ K+ +P + E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 198 IKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK---DDTNWRPLNFNFLI 254
KH NI+ +F ++ ++ + M L + + DD + + I
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD------HIQYFI 118
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL--PAID 312
+ L A++ LH + H +LKPSN+L++ V DFG+AR + A D
Sbjct: 119 YQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 ------KQNRFICIKGSTGYIPPEYDL-GCEASTYGDVYSFGILLLEMFTGIRPSDGIFT 365
+Q+ + + Y PE L + S DV+S G +L E+F RP IF
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RP---IFP 224
Query: 366 GK 367
G+
Sbjct: 225 GR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R + + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH-----TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 87
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 143
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 144 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 196
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
S Y PE G T DV+S G +L E+ G
Sbjct: 197 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G +V +F G+L +LR K + L +FL
Sbjct: 83 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 87
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
VR+ + +S + + + +V ++P P+ + L +L
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL---- 143
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFICIK 321
+L Y+H I H ++KP N+LLD D + + DFG A+ L + IC
Sbjct: 144 --FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC-- 196
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
S Y PE G T DV+S G +L E+ G
Sbjct: 197 -SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 10 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 126
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 183
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 184 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAF 210
+G G +G VY G +A+K L G + E + H NIV +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR- 269
R +V++FM E+ L+ D N L + I I + LR
Sbjct: 89 -----HSERCLTLVFEFM-----EKDLKKVLDENKTGLQDS-------QIKIYLYQLLRG 131
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYI 327
HC Q I H +LKP N+L++ + + DFG+AR +P + + + Y
Sbjct: 132 VAHCH-QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL----WYR 186
Query: 328 PPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
P+ +G + ST D++S G + EM TG
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + D+G+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++ C L LH + I + +LKP N+LLDD + D G+A +P +
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ GY+ PE + D ++ G LL EM G P
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY + G A KV + + E + H IV++ A+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY- 77
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
Y + ++ +F P G+++ + D P + ++ L+ AL +L
Sbjct: 78 ---YHDGKL-WIMIEFCPGGAVDAIMLELDRGLTEP-QIQVVCRQMLE-------ALNFL 125
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H I H +LK NVL+ E + DFG+ A+ L + K++ FI G+ ++ PE
Sbjct: 126 HSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPE 179
Query: 331 YDLGCEA---STY---GDVYSFGILLLEM 353
+ CE + Y D++S GI L+EM
Sbjct: 180 V-VMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 38/231 (16%)
Query: 147 FSSANLIGAGNFGSVYNGTLF-DGTTIAVKV-FNLIR----PGGSKSFKSECKAAINIKH 200
++G+G FG+VY G DG + + V ++R P +K E +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLR-------GKDDTNWRPLNFNFL 253
+ R+ Q +V + MP G L + +R +D NW
Sbjct: 79 PYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDLLNW-------- 124
Query: 254 IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDK 313
+ +A + YL D + + H +L NVL+ + DFG+AR L +
Sbjct: 125 -------CMQIAKGMSYLE-DVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 314 QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
+ K ++ E L + DV+S+G+ + E+ T G +P DGI
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 28/209 (13%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG VY + G A KV + + E + H IV++ A+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY- 85
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
Y + ++ +F P G+++ + D P + ++ L+ AL +L
Sbjct: 86 ---YHDGKL-WIMIEFCPGGAVDAIMLELDRGLTEP-QIQVVCRQMLE-------ALNFL 133
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H I H +LK NVL+ E + DFG+ A+ L + K++ FI G+ ++ PE
Sbjct: 134 HSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPE 187
Query: 331 YDLGCEA---STY---GDVYSFGILLLEM 353
+ CE + Y D++S GI L+EM
Sbjct: 188 V-VMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G V+ +F G+L +LR K + L +FL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 195
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
++ IG G +G V + +D I P +++ E + + +H N
Sbjct: 45 YTQLQYIGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
++ + + R +V M L + L+ + +N F + I +
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFLYQILR------ 155
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+L++ + DFG+AR P D
Sbjct: 156 ----GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 251
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++ C L LH + I + +LKP N+LLDD + D G+A +P +
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ GY+ PE + D ++ G LL EM G P
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 113
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 171 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 109
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ F+ + Y PE L + D++S G ++ E+ TG
Sbjct: 167 LARH--TDDEMAGFVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G +V +F G+L +LR K + L +FL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDX 204
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 90
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 133
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 134 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 191 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 34/222 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS-ECKAAINIKHRNI 203
++ +IG G+FG VY L D G +A+K + K FK+ E + + H NI
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKLDHCNI 109
Query: 204 VRV-FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI-- 260
VR+ + +S + + + +V ++P +T +R K+ L +
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVP------------ETVYRVARHYSRAKQTLPVIY 157
Query: 261 ----AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQN 315
+ +L Y+H I H ++KP N+LLD D + + DFG A+ L +
Sbjct: 158 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 214
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
IC S Y PE G T DV+S G +L E+ G
Sbjct: 215 SXIC---SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTA 209
+G G F V + G A + N + K E +A I +KH NIVR+ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
S +G + +++ + G L E + ++ + + + I++ L+
Sbjct: 79 ISE---EGHHY--LIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAV-------- 123
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFICIKGSTGY 326
LHC Q + H NLKP N+LL ++ G + DFG+A + +Q + G+ GY
Sbjct: 124 -LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGY 179
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ PE YG D+++ G++L + G P
Sbjct: 180 LSPEV---LRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 89
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 132
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 133 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 190 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 76
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 119
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 120 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 177 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 91
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G +V +F G+L +LR K + L +FL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG+
Sbjct: 116 IVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLC 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G +V +F G+L +LR K + L +FL
Sbjct: 129 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 185 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 242 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 109
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 167 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G V+ +F G+L +LR K + L +FL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 136 ----GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 231
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 31/231 (13%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP-------LNFNFLI 254
N+V + A + G +V +F G+L +LR K + + P L +FL
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRN-EFVPYKEAPEDLYKDFLT 148
Query: 255 KKKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDK 313
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 314 QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 256
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 80
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 81 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 123
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 124 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 180
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 181 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 153 IGAGNFGSVYNGTLF--DGT----TIAVKVFNLIRPGGS----KSFKSECKAAINIKHR- 201
+G G FG V F D T T+AVK +++ G + ++ SE K I+I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVK---MLKEGATHSEHRALMSELKILIHIGHHL 82
Query: 202 NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD------TNWRPLNFNFLIK 255
N+V + A + G V+ +F G+L +LR K + L +FL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 256 KKLDI-AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ L + VA + +L H +L N+LL ++ + + DFG+AR +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
R + ++ PE + DV+SFG+LL E+F+ G P G+
Sbjct: 196 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 45/236 (19%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGG-SKSFKSECKAAINIKHRNIVR 205
+G FG VY G LF +A+K G + F+ E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV- 92
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK----------DDTNWR----PLNFN 251
GV + ++++ + +G L E+L + DD + P +F
Sbjct: 93 ---CLLGVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 252 FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
L+ + +A + YL + H +L NVL+ D++ + D G+ R + A
Sbjct: 149 HLVAQ-------IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 198
Query: 312 DKQ----NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDG 362
D N + I+ ++ PE + + S D++S+G++L E+F+ G++P G
Sbjct: 199 DYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 143 ATNGF---SSANLIGAGNFGSVYN-GTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
A N F S ++G G FG V+ G +A K+ + K+E +
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 199 KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDT-NWRPLNFNFLIKKK 257
H N+++++ AF + +V +++ G L + R D++ N L+ +K+
Sbjct: 144 DHANLIQLYDAF-----ESKNDIVLVMEYVDGGELFD--RIIDESYNLTELDTILFMKQ- 195
Query: 258 LDIAIDVACALRYLHCDCQPPIAHCNLKPSNVL---LDDEMIGHVGDFGMA-RFLPAIDK 313
+ +R++H Q I H +LKP N+L D + I + DFG+A R+ P
Sbjct: 196 ------ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPREKL 245
Query: 314 QNRFICIKGSTGYIPPE---YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ F G+ ++ PE YD S D++S G++ + +G+ P
Sbjct: 246 KVNF----GTPEFLAPEVVNYDF---VSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKS----ECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 48/243 (19%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS 185
+Q +N K ++ + + + +G+G +GSV FD G +AVK L RP S
Sbjct: 30 RQELN----KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQS 81
Query: 186 ----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD 241
K E + ++KH N++ + F+ P SLEE+
Sbjct: 82 IIHAKRTYRELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYL 124
Query: 242 DTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
T+ + N ++K +KL + + L+Y+H I H +LKPSN+ ++++
Sbjct: 125 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 181
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEM 353
+ DFG+AR + + Y PE L + D++S G ++ E+
Sbjct: 182 CELKILDFGLARH-----TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 354 FTG 356
TG
Sbjct: 237 LTG 239
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ + IG G+FG VY G D T V +I ++ + + I + +
Sbjct: 21 FTKLDRIGKGSFGEVYKG--IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G + + ++ +++ GS + L+ PL ++ I ++
Sbjct: 79 ITRYFGSYLKSTKL-WIIMEYLGGGSALDLLKPG------PLEETYIA----TILREILK 127
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL ++ + DFG+A L K+N F+ G+
Sbjct: 128 GLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV---GTPF 181
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGI 363
++ PE D++S GI +E+ G P+ +
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 136 ----GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 231
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 45/236 (19%)
Query: 153 IGAGNFGSVYNGTLF------DGTTIAVKVFNLIRPGG-SKSFKSECKAAINIKHRNIVR 205
+G FG VY G LF +A+K G + F+ E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV- 75
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK----------DDTNWR----PLNFN 251
GV + ++++ + +G L E+L + DD + P +F
Sbjct: 76 ---CLLGVVTKDQPL-SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 252 FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
L+ + +A + YL + H +L NVL+ D++ + D G+ R + A
Sbjct: 132 HLVAQ-------IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 312 DKQ----NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDG 362
D N + I+ ++ PE + + S D++S+G++L E+F+ G++P G
Sbjct: 182 DYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 233
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI--AVKVFNLIRPGGS 185
G +I ++ T+G+ IG G++ SV + T + AVK+ + + +
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPT 63
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSL-EEWLRGKDDTN 244
+ + + +H NI+ + Y ++ VV + M G L ++ LR K +
Sbjct: 64 EEIEILLRYG---QHPNIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQKFFSE 115
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVG 300
F I K ++ YLH + H +LKPSN+L DE +
Sbjct: 116 REASAVLFTITKTVE----------YLHAQG---VVHRDLKPSNILYVDESGNPESIRIC 162
Query: 301 DFGMARFLPAIDKQNRFICIKGSTG-YIPPE------YDLGCEASTYGDVYSFGILLLEM 353
DFG A+ L A +N + T ++ PE YD C D++S G+LL M
Sbjct: 163 DFGFAKQLRA---ENGLLMTPCYTANFVAPEVLERQGYDAAC------DIWSLGVLLYTM 213
Query: 354 FTGIRP 359
TG P
Sbjct: 214 LTGYTP 219
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 136 ----GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 231
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 35/242 (14%)
Query: 140 LYNATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAV-KVFNLIRPGGSKSFKSECKAAIN 197
+YN ++ F +L+G G +G V + T G +A+ K+ +P + E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 198 IKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK---DDTNWRPLNFNFLI 254
KH NI+ +F ++ ++ + M L + + DD + + I
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD------HIQYFI 118
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL--PAID 312
+ L A++ LH + H +LKPSN+L++ V DFG+AR + A D
Sbjct: 119 YQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 KQNRFICIKGSTGYI------PPEYDL-GCEASTYGDVYSFGILLLEMFTGIRPSDGIFT 365
G T Y+ PE L + S DV+S G +L E+F RP IF
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RP---IFP 224
Query: 366 GK 367
G+
Sbjct: 225 GR 226
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 151 NLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----KHRNIV 204
+LIG G+FG V + +A+K+ K+F ++ + + + KH +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ + + +V++ M + +L + LR +TN+R ++ N K A +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLR---NTNFRGVSLNLTRK----FAQQM 166
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMA-----RFLPAIDKQNRF 317
AL +L + I HC+LKP N+LL + + DFG + R I Q+RF
Sbjct: 167 CTALLFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI--QSRF 223
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
Y PE LG D++S G +L+EM TG + +F+G
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG----EPLFSG 260
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 41/229 (17%)
Query: 151 NLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----KHRNIV 204
+LIG G+FG V + +A+K+ K+F ++ + + + KH +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ + + +V++ M + +L + LR +TN+R ++ N K A +
Sbjct: 115 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLR---NTNFRGVSLNLTRK----FAQQM 166
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLL--DDEMIGHVGDFGMA-----RFLPAIDKQNRF 317
AL +L + I HC+LKP N+LL + DFG + R I Q+RF
Sbjct: 167 CTALLFL-ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXI--QSRF 223
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
Y PE LG D++S G +L+EM TG + +F+G
Sbjct: 224 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG----EPLFSG 260
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 144 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIK 199
++ + ++G G+FG V G AVKV + + + +S E + +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F Y +V + G L F+ +I +K
Sbjct: 91 HPNIMKLYEFFEDKGYF-----YLVGEVYTGGEL----------------FDEIISRKRF 129
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
+D A +R Y+H + I H +LKP N+LL+ + + DFG++
Sbjct: 130 SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Query: 310 AIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
A K I G+ YI PE YD C DV+S G++L + +G P +G
Sbjct: 187 ASKKMKDKI---GTAYYIAPEVLHGTYDEKC------DVWSTGVILYILLSGCPPFNG 235
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 144 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIK 199
++ + ++G G+FG V G AVKV + + + +S E + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F Y +V + G L F+ +I +K
Sbjct: 85 HPNIMKLYEFFEDKGY-----FYLVGEVYTGGEL----------------FDEIISRKRF 123
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
+D A +R Y+H + I H +LKP N+LL+ + + DFG++
Sbjct: 124 SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 310 AIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
A K I G+ YI PE YD C DV+S G++L + +G P +G
Sbjct: 181 ASKKMKDKI---GTAYYIAPEVLHGTYDEKC------DVWSTGVILYILLSGCPPFNG 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 30/224 (13%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFN---LIRPGGSKSFKSECKAAINIKHRN 202
F +IG G FG V L + + A+K+ N +++ + F+ E +N +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I + AF Q +V + G L L +D P ++ IAI
Sbjct: 136 ITTLHYAF-----QDDNNLYLVMDYYVGGDLLTLLSKFEDR--LPEEMARFYLAEMVIAI 188
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDFGMARFLPAIDKQNRFICI 320
D L Y+H D +KP N+L+D M GH+ DFG L + +
Sbjct: 189 DSVHQLHYVHRD---------IKPDNILMD--MNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 321 KGSTGYIPPEYDLGCEAST--YG---DVYSFGILLLEMFTGIRP 359
G+ YI PE E YG D +S G+ + EM G P
Sbjct: 238 -GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 140 LYNATNGFSSANLIGAGNFGSVYNGTLF-DGTTIAV-KVFNLIRPGGSKSFKSECKAAIN 197
+YN ++ F +L+G G +G V + T G +A+ K+ +P + E K +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 198 IKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGK---DDTNWRPLNFNFLI 254
KH NI+ +F ++ ++ + M L + + DD + + I
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD------HIQYFI 118
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL--PAID 312
+ L A++ LH + H +LKPSN+L++ V DFG+AR + A D
Sbjct: 119 YQTLR-------AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 ------KQNRFICIKGSTGYIPPEYDL-GCEASTYGDVYSFGILLLEMFTGIRPSDGIFT 365
+Q+ + Y PE L + S DV+S G +L E+F RP IF
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR-RP---IFP 224
Query: 366 GK 367
G+
Sbjct: 225 GR 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 33 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 143
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 144 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 239
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 136 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 231
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 25 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 135
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 136 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI--- 198
AT+ + IG G +G+VY G +A+K + P G + + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 199 ----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
+H N+VR+ + +V++ +++ LR D P I
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETI 114
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K D+ L +LH +C I H +LKP N+L+ + DFG+AR Q
Sbjct: 115 K---DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 151 NLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-----KHRNIV 204
+LIG G+FG V + +A+K+ K+F ++ + + + KH +
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
+ + + +V++ M + +L + LR +TN+R ++ N K A +
Sbjct: 96 KYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLR---NTNFRGVSLNLTRK----FAQQM 147
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMA-----RFLPAIDKQNRF 317
AL +L + I HC+LKP N+LL + + DFG + R I Q+RF
Sbjct: 148 CTALLFL-ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXI--QSRF 204
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
Y PE LG D++S G +L+EM TG + +F+G
Sbjct: 205 --------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTG----EPLFSG 241
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 137
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 138 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 155
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 156 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 251
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 66
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 109
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K KL + + L+Y+H I H +LKPSN+ ++++ + DFG
Sbjct: 110 NNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 166
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 167 LARHTD--DEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + FG+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 144 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIK 199
++ + ++G G+FG V G AVKV + + + +S E + +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F Y +V + G L F+ +I +K
Sbjct: 108 HPNIMKLYEFFEDKGY-----FYLVGEVYTGGEL----------------FDEIISRKRF 146
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
+D A +R Y+H + I H +LKP N+LL+ + + DFG++
Sbjct: 147 SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 310 AIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
A K I G+ YI PE YD C DV+S G++L + +G P +G
Sbjct: 204 ASKKMKDKI---GTAYYIAPEVLHGTYDEKC------DVWSTGVILYILLSGCPPFNG 252
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 35/210 (16%)
Query: 156 GNFGSVYNGTLFDGTTIAV-KVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVD 214
G+FG VY + + +A KV + + + E + H NIV++ AF
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY--- 77
Query: 215 YQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL---NFNFLIKKKLDIAIDVACALRYL 271
Y+ + ++ +F G+++ + + RPL + K+ LD AL YL
Sbjct: 78 YENNLW--ILIEFCAGGAVDAVMLELE----RPLTESQIQVVCKQTLD-------ALNYL 124
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA--RFLPAIDKQNRFICIKGSTGYIPP 329
H + I H +LK N+L + + DFG++ I +++ FI G+ ++ P
Sbjct: 125 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI---GTPYWMAP 178
Query: 330 EYDLGCEAST------YGDVYSFGILLLEM 353
E + CE S DV+S GI L+EM
Sbjct: 179 EV-VMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG V+ T G A K ++ + E + ++H +V + AF
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID----VACA 267
+ ++Y+FM G L E + D+ N K D A++ V
Sbjct: 119 DDNEM-----VMIYEFMSGGELFE--KVADEHN----------KMSEDEAVEYMRQVCKG 161
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFICIKGSTG 325
L ++H + H +LKP N++ + + DFG+ L D + G+
Sbjct: 162 LCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAE 215
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
+ PE G Y D++S G+L + +G+ P G
Sbjct: 216 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 252
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + D G+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI--- 198
AT+ + IG G +G+VY G +A+K + P G + + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 199 ----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
+H N+VR+ + +V++ +++ LR D P I
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETI 114
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K D+ L +LH +C I H +LKP N+L+ + DFG+AR Q
Sbjct: 115 K---DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 52/238 (21%)
Query: 144 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIK 199
++ + ++G G+FG V G AVKV + + + +S E + +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F Y +V + G L F+ +I +K
Sbjct: 109 HPNIMKLYEFFEDKGY-----FYLVGEVYTGGEL----------------FDEIISRKRF 147
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
+D A +R Y+H + I H +LKP N+LL+ + + DFG++
Sbjct: 148 SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 310 AIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
A K I G+ YI PE YD C DV+S G++L + +G P +G
Sbjct: 205 ASKKMKDKI---GTAYYIAPEVLHGTYDEKC------DVWSTGVILYILLSGCPPFNG 253
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 133
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 134 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 28/241 (11%)
Query: 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK----VFNLIRPGGSKSFKS 190
SF ++ + + IG G +G V + G +A+K F+++ +K
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNAKRTLR 102
Query: 191 ECKAAINIKHRNIVRVFTAFS-GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
E K + KH NI+ + V Y + VV M L + + +
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVR 161
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
+ FL + + L+Y+H + H +LKPSN+L+++ +GDFGMAR L
Sbjct: 162 Y-FLYQ--------LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209
Query: 310 AIDKQNRFICIK--GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTG 366
++++ + + Y PE L T D++S G + EM +F G
Sbjct: 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA----RRQLFPG 265
Query: 367 K 367
K
Sbjct: 266 K 266
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 140
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 141 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 236
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 31 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 141
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 142 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 237
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 22 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 132
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 133 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 228
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + D G+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 45 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQHLSNDHICYFLYQILR------ 155
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 156 ----GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 251
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 150 ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSK---SFKSECKAAINIKHRNIVR 205
+ +G G FG V G G +AVK+ N + K E + +H +I++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 206 VFTAFSG-VDYQGARFKAVVYKFMPNGSLEEWL--RGK-DDTNWRPLNFNFLIKKKLDIA 261
++ S D+ +V +++ G L +++ G+ ++ R L L
Sbjct: 76 LYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL-------- 121
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
A+ Y H + + H +LKP NVLLD M + DFG++ + + + R C
Sbjct: 122 ----SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC-- 171
Query: 322 GSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A D++S G++L + G P D
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 30 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 140
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 141 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 236
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G FG V+ T G A K ++ + E + ++H +V + AF
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID----VACA 267
+ ++Y+FM G L E + D+ N K D A++ V
Sbjct: 225 DDNEM-----VMIYEFMSGGELFE--KVADEHN----------KMSEDEAVEYMRQVCKG 267
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFICIKGSTG 325
L ++H + H +LKP N++ + + DFG+ L D + G+
Sbjct: 268 LCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAE 321
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
+ PE G Y D++S G+L + +G+ P G
Sbjct: 322 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 23 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 133
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 134 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 52/239 (21%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNI 203
F ++G G FG V D A+K IR K + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 204 VRVFTAF----------SGVDYQGARFKAVVYKFMPNGSL-----EEWLRGKDDTNWRPL 248
VR + A+ + V + F + ++ N +L E L + D WR
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLF--IQMEYCENRTLYDLIHSENLNQQRDEYWR-- 120
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308
L ++ L+ AL Y+H I H +LKP N+ +D+ +GDFG+A+ +
Sbjct: 121 ----LFRQILE-------ALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
Query: 309 P------AIDKQN------RFICIKGSTGYIPPEYDLGC-EASTYGDVYSFGILLLEMF 354
+D QN G+ Y+ E G + D+YS GI+ EM
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 41/224 (18%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-----FLP 309
+ + C +++LH I H +LKPSN+++ + + DFG+AR F+
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ R+ Y PE LG D++S G ++ EM
Sbjct: 183 EPEVVTRY--------YRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 137
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 138 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 29 YTNLSYIGEGAYGMVCSA--YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKCQHLSNDHICYFLYQILR------ 139
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 140 ----GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 235
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 58/253 (22%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 102
Query: 199 -----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
H NIV + A + G V+ ++ G L +LR K D+ F+
Sbjct: 103 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FI 149
Query: 254 IKKK-----------------LDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEM 295
K L + VA + +L +C H +L N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGR 205
Query: 296 IGHVGDFGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLL 351
I + DFG+AR + K + +KG+ ++ PE C + DV+S+GI L
Sbjct: 206 ITKICDFGLARHI----KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 352 EMFT-GIRPSDGI 363
E+F+ G P G+
Sbjct: 262 ELFSLGSSPYPGM 274
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARF-LPAIDKQNRF 317
+ +++ AL YLH + I + +LK NVLLD E GH+ D+GM + L D + F
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEGLRPGDTTSXF 181
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
C G+ YI PE G + D ++ G+L+ EM G P D
Sbjct: 182 -C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N + +I+ +LD
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM 182
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G+++ EM G
Sbjct: 183 TPYVVTR---YYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 25/216 (11%)
Query: 151 NLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSK---SFKSECKAAINIKHRNIVRV 206
+ +G G FG V G G +AVK+ N + + E + +H +I+++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
+ S + ++ M E++ G + ++ N K+ + +
Sbjct: 82 YQVIST--------PSDIFMVM------EYVSGGELFDYICKNGRLDEKESRRLFQQILS 127
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+ Y H + + H +LKP NVLLD M + DFG++ + + + R C GS Y
Sbjct: 128 GVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC--GSPNY 181
Query: 327 IPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
PE G A D++S G++L + G P D
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGS----KSFKSEC 192
K ++ + + + +G+G +GSV FD T + V V L RP S K E
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+ ++KH N++ + F+ P SLEE+ T+ + N
Sbjct: 73 RLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADLNN 115
Query: 253 LIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
++K +KL + + L+Y+H I H +LKPSN+ ++++ + D G+A
Sbjct: 116 IVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
R D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 173 RH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 28/241 (11%)
Query: 136 SFKDLYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVK----VFNLIRPGGSKSFKS 190
SF ++ + + IG G +G V + G +A+K F+++ +K
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TNAKRTLR 103
Query: 191 ECKAAINIKHRNIVRVFTAF-SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
E K + KH NI+ + V Y + VV M L + + +
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVR 162
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
+ FL + + L+Y+H + H +LKPSN+L+++ +GDFGMAR L
Sbjct: 163 Y-FLYQ--------LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLC 210
Query: 310 AIDKQNRFICIK--GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTG 366
++++ + + Y PE L T D++S G + EM +F G
Sbjct: 211 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA----RRQLFPG 266
Query: 367 K 367
K
Sbjct: 267 K 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 172 IAVKVFNLIRPGGS-KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN 230
+A+K NL + S E +A H NIV +T+F D +V K +
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMKLLSG 97
Query: 231 GSLEEWLR---GKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287
GS+ + ++ K + L+ + + I +V L YLH + Q H ++K
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIA----TILREVLEGLEYLHKNGQ---IHRDVKAG 150
Query: 288 NVLLDDEMIGHVGDFGMARFLPA---IDKQNRFICIKGSTGYIPPEYDLGCEASTY-GDV 343
N+LL ++ + DFG++ FL I + G+ ++ PE + D+
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210
Query: 344 YSFGILLLEMFTGIRP 359
+SFGI +E+ TG P
Sbjct: 211 WSFGITAIELATGAAP 226
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 33/221 (14%)
Query: 150 ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSK---SFKSECKAAINIKHRNIVR 205
+ +G G FG V G G +AVK+ N + K E + +H +I++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 206 VFTAFSG-VDYQGARFKAVVYKFMPNGSLEEWL--RGK-DDTNWRPLNFNFLIKKKLDIA 261
++ S D+ +V +++ G L +++ G+ ++ R L L
Sbjct: 76 LYQVISTPTDF------FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL-------- 121
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIK 321
A+ Y H + + H +LKP NVLLD M + DFG++ + + + R C
Sbjct: 122 ----SAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC-- 171
Query: 322 GSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A D++S G++L + G P D
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 26/227 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSF----KSECKAAINIKHRN 202
+++ + IG G +G V + +D I P +++ E K + +H N
Sbjct: 27 YTNLSYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
I+ + + + +V M L + L+ + +N F + I +
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR------ 137
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL-PAIDKQNRFICIK 321
L+Y+H + H +LKPSN+LL+ + DFG+AR P D
Sbjct: 138 ----GLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRPSDGIFTGK 367
+ Y PE L + T D++S G +L EM + RP IF GK
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RP---IFPGK 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D++ V DFG A+ + + +C
Sbjct: 134 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK---RVKGRTWXLC- 186
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 187 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 41/224 (18%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 9 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 125
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-----FLP 309
+ + C +++LH I H +LKPSN+++ + + DFG+AR F+
Sbjct: 126 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 182
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ R+ Y PE LG D++S G ++ EM
Sbjct: 183 EPEVVTRY--------YRAPEVILGMGYKENVDLWSVGCIMGEM 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 143 ATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI--- 198
AT+ + IG G +G+VY G +A+K + P G + + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 199 ----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
+H N+VR+ + +V++ +++ LR D P I
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-----HVDQDLRTYLDKAPPPGLPAETI 114
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
K D+ L +LH +C I H +LKP N+L+ + DFG+AR Q
Sbjct: 115 K---DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQ 165
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 172 IAVKVFNLIRPGGS-KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN 230
+A+K NL + S E +A H NIV +T+F D +V K +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW-----LVMKLLSG 92
Query: 231 GSLEEWLR---GKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPS 287
GS+ + ++ K + L+ + + I +V L YLH + Q H ++K
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIA----TILREVLEGLEYLHKNGQ---IHRDVKAG 145
Query: 288 NVLLDDEMIGHVGDFGMARFLPA---IDKQNRFICIKGSTGYIPPEYDLGCEASTY-GDV 343
N+LL ++ + DFG++ FL I + G+ ++ PE + D+
Sbjct: 146 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 205
Query: 344 YSFGILLLEMFTGIRP 359
+SFGI +E+ TG P
Sbjct: 206 WSFGITAIELATGAAP 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 14 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 71 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 130
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 131 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 187
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
++ + Y PE LG D++S G ++ EM
Sbjct: 188 TPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEM 223
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 87/222 (39%), Gaps = 32/222 (14%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAV---VYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256
H NIV++ + F+ V + KFM +L PL LIK
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASAL----------TGIPLP---LIKS 110
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQ 314
L + L + H + H +LKP N+L++ E + DFG+AR +P
Sbjct: 111 YL---FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX 164
Query: 315 NRFICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 HEVVTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARF-LPAIDKQNRF 317
+ +++ AL YLH + I + +LK NVLLD E GH+ D+GM + L D + F
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEGLRPGDTTSTF 213
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
C G+ YI PE G + D ++ G+L+ EM G P D
Sbjct: 214 -C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 92/237 (38%), Gaps = 52/237 (21%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRNI 203
F ++G G FG V D A+K IR K + SE ++ H+ +
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 204 VRVFTAF----------SGVDYQGARFKAVVYKFMPNGSL-----EEWLRGKDDTNWRPL 248
VR + A+ + V + F + ++ N +L E L + D WR
Sbjct: 65 VRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRDEYWR-- 120
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFL 308
L ++ L+ AL Y+H I H NLKP N+ +D+ +GDFG+A+ +
Sbjct: 121 ----LFRQILE-------ALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNV 166
Query: 309 P------AIDKQN------RFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLE 352
+D QN G+ Y+ E D + D YS GI+ E
Sbjct: 167 HRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 96/231 (41%), Gaps = 39/231 (16%)
Query: 147 FSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVR 205
F +G G++GSVY + G +A+K E IK +I++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK-----------QVPVESDLQEIIKEISIMQ 79
Query: 206 VFTAFSGVDYQGARFK----AVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIA 261
+ V Y G+ FK +V ++ GS+ + +R ++ T L + ++
Sbjct: 80 QCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---------LTEDEIATI 130
Query: 262 IDVAC-ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAIDKQNRFIC 319
+ L YLH + H ++K N+LL+ E + DFG+A + + K+N I
Sbjct: 131 LQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI- 186
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG------IRPSDGIF 364
G+ ++ PE + D++S GI +EM G I P IF
Sbjct: 187 --GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF 235
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARF-LPAIDKQNRF 317
+ +++ AL YLH + I + +LK NVLLD E GH+ D+GM + L D + F
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEGLRPGDTTSXF 166
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
C G+ YI PE G + D ++ G+L+ EM G P D
Sbjct: 167 -C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 157 NFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVD 214
NF SV G D T +K + ++P GS + C A I RN+ ++ F
Sbjct: 3 NFYSVEIG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 59
Query: 215 YQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD- 259
+ ++ +V F P SLEE+ N +I+ +LD
Sbjct: 60 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDH 119
Query: 260 -----IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ 314
+ + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 120 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 176
Query: 315 NRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
++ + Y PE LG D++S G ++ EM
Sbjct: 177 TPYVVTR---YYRAPEVILGMGYKENVDLWSVGCIMGEM 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + + R G S+ + E I+H NI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD-TNWRPLNFNFLIKKKLDIAIDV 264
+ F + ++ + + G L ++L K+ T F +K+ LD
Sbjct: 80 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF---LKQILD----- 126
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH----VGDFGMARFLPAIDKQNRFICI 320
+ YLH IAH +LKP N++L D+ + + + DFG+A I+ N F I
Sbjct: 127 --GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNI 178
Query: 321 KGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 5/102 (4%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A +++ L +LH + I + +LK NV+LD E + DFGM + R C
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC- 181
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ YI PE D +++G+LL EM G P DG
Sbjct: 182 -GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 30/230 (13%)
Query: 140 LYNATNGFSS----ANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKA 194
+ NA+ FS +G G F V G A K+ N + K E +A
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 195 AI--NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
I ++H NIVR+ + Q F +V+ + G L E + ++ + + +
Sbjct: 80 RICRKLQHPNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVARE--FYSEADASH 132
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
I++ L+ ++ Y H + I H NLKP N+LL + G + DFG+A
Sbjct: 133 CIQQILE-------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---I 179
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ + G+ GY+ PE S D+++ G++L + G P
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 142 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 194
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 195 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 65 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 111
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 167
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 168 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 133 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWTL 184
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARF-LPAIDKQNRF 317
+ +++ AL YLH + I + +LK NVLLD E GH+ D+GM + L D + F
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSE--GHIKLTDYGMCKEGLRPGDTTSXF 170
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSD 361
C G+ YI PE G + D ++ G+L+ EM G P D
Sbjct: 171 -C--GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 109
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTWXLC- 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D + + DFG+A ID N F I G+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPA 182
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 183 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 109
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKDFMDASALTGI-PLP---LIKSYL- 109
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 41/223 (18%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + + R G S+ + E I+H NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD-TNWRPLNFNFLIKKKLDIAIDV 264
+ F + ++ + + G L ++L K+ T F +K+ LD
Sbjct: 73 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF---LKQILD----- 119
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH----VGDFGMARFLPAIDKQNRFICI 320
+ YLH IAH +LKP N++L D+ + + + DFG+A I+ N F I
Sbjct: 120 --GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNI 171
Query: 321 KGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 111
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 112 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 167 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG+A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 200
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 111
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 112 --FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 167 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 109
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 72 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 118
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 174
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 175 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 200
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 200
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 69 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 115
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 171
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 172 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFD---GTTIAVKVFNLIRPGGS----KSFKS 190
K ++ + + + +G+G +GSV FD G +AVK L RP S K
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVK--KLSRPFQSIIHAKRTYR 70
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
E + ++KH N++ + F+ P SLEE+ T+ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFT-----------------PARSLEEFNDVYLVTHLMGADL 113
Query: 251 NFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG 303
N ++K +KL + + L+Y+H I H +LKPSN+ ++++ + DF
Sbjct: 114 NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFY 170
Query: 304 MARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTG 356
+AR D+ ++ + Y PE L + D++S G ++ E+ TG
Sbjct: 171 LARH--TDDEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 110
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 111 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 166 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 140 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 192
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 193 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 200
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 110
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 111 --FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 166 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 110
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 111 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 165
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 166 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 52/238 (21%)
Query: 144 TNGFSSANLIGAGNFGSV-YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIK 199
++ + ++G G+FG V G AVKV + + + +S E + +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI +++ F Y +V + G L F+ +I +K
Sbjct: 85 HPNIXKLYEFFEDKGYF-----YLVGEVYTGGEL----------------FDEIISRKRF 123
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLP 309
+D A +R Y H + I H +LKP N+LL+ + + DFG++
Sbjct: 124 SEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 310 AIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
A K I G+ YI PE YD C DV+S G++L + +G P +G
Sbjct: 181 ASKKXKDKI---GTAYYIAPEVLHGTYDEKC------DVWSTGVILYILLSGCPPFNG 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 200
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 201 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 65 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 113
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 114 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 168
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 169 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 112
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 113 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 168 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 111
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 112 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 167 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 65 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 111
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 167
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 168 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 61 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 109
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 110 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 165 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 110
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL- 166
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 167 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 65 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 111
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 167
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 168 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 140 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 192
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 193 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 110
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 166
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 167 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL- 112
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 113 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 168 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Query: 258 LDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRF 317
L I I +A A+ +LH + H +LKPSN+ + + VGDFG+ + +++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 318 ICIK----------GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ G+ Y+ PE G S D++S G++L E+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 89/225 (39%), Gaps = 28/225 (12%)
Query: 154 GAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKA-----AINIKHRNIVRVF- 207
G+ Y+ + D T +K + ++P GS + C A IN+ + + R F
Sbjct: 1 GSHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 60
Query: 208 --TAFSGVDYQGARFKAVVYK--------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK 257
T + K V +K F P +LEE+ N +I +
Sbjct: 61 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME 120
Query: 258 LD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI 311
LD + + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
++ + Y PE LG D++S G ++ E+ G
Sbjct: 178 FMMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 66 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 112
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL- 168
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 169 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 28/237 (11%)
Query: 130 QTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFN---LIRPGGS 185
Q IN + + + F +IG G+FG V + AVKV +++
Sbjct: 23 QQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE 82
Query: 186 KSFKSECKAAI-NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTN 244
K SE + N+KH +V + +F Q A V ++ G L L+ +
Sbjct: 83 KHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVLDYINGGELFYHLQRER--- 134
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDF 302
FL + A ++A AL YLH I + +LKP N+LLD + GH+ DF
Sbjct: 135 ------CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQ--GHIVLTDF 183
Query: 303 GMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ + I+ + G+ Y+ PE D + G +L EM G+ P
Sbjct: 184 GLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + +C
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWXLC- 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 219
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 60/254 (23%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 95
Query: 199 -----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
H NIV + A + G V+ ++ G L +LR K D+
Sbjct: 96 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS---------F 141
Query: 254 IKKKLDIAI------------------DVACALRYLHC-DCQPPIAHCNLKPSNVLLDDE 294
I K AI VA + +L +C H +L N+LL
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHG 197
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILL 350
I + DFG+AR + K + +KG+ ++ PE C + DV+S+GI L
Sbjct: 198 RITKICDFGLARDI----KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 253
Query: 351 LEMFT-GIRPSDGI 363
E+F+ G P G+
Sbjct: 254 WELFSLGSSPYPGM 267
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 110
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 166
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 167 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 60/254 (23%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 97
Query: 199 -----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
H NIV + A + G V+ ++ G L +LR K D+
Sbjct: 98 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS---------F 143
Query: 254 IKKKLDIAI------------------DVACALRYLHC-DCQPPIAHCNLKPSNVLLDDE 294
I K AI VA + +L +C H +L N+LL
Sbjct: 144 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHG 199
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILL 350
I + DFG+AR + K + +KG+ ++ PE C + DV+S+GI L
Sbjct: 200 RITKICDFGLARDI----KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL 255
Query: 351 LEMFT-GIRPSDGI 363
E+F+ G P G+
Sbjct: 256 WELFSLGSSPYPGM 269
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 110
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL- 166
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 167 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI----AVKVFNLIRPGGSKSFKSECKAAINIKHRN 202
+ +G G F Y T D + V L++P + +E ++ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
+V F G ++ F VV + SL E L + P + +++ +
Sbjct: 104 VV----GFHGF-FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-EARYFMRQTIQ--- 153
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++YLH + + H +LK N+ L+D+M +GDFG+A + ++ + +C G
Sbjct: 154 ----GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC--G 204
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S D++S G +L + G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 58/253 (22%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 102
Query: 199 -----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
H NIV + A + G V+ ++ G L +LR K D+ F+
Sbjct: 103 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FI 149
Query: 254 IKKK-----------------LDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEM 295
K L + VA + +L +C H +L N+LL
Sbjct: 150 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGR 205
Query: 296 IGHVGDFGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLL 351
I + DFG+AR + K + +KG+ ++ PE C + DV+S+GI L
Sbjct: 206 ITKICDFGLARDI----KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 352 EMFT-GIRPSDGI 363
E+F+ G P G+
Sbjct: 262 ELFSLGSSPYPGM 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 219
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 63 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKDFMDASALTGI-PLP---LIKSYL- 111
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 112 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 167 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 96/223 (43%), Gaps = 41/223 (18%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E I+H NI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDD-TNWRPLNFNFLIKKKLDIAIDV 264
+ F + ++ + + G L ++L K+ T F +K+ LD
Sbjct: 94 LHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF---LKQILD----- 140
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGH----VGDFGMARFLPAIDKQNRFICI 320
+ YLH IAH +LKP N++L D+ + + + DFG+A I+ N F I
Sbjct: 141 --GVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH---KIEAGNEFKNI 192
Query: 321 KGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 231
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKDFMDASALTGI-PLP---LIKSYL- 112
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 113 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 168 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 67 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 112
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 113 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 166
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 28/217 (12%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKA-----AINIKHRNIVRVF---TAFSGV 213
Y+ + D T +K + ++P GS + C A IN+ + + R F T
Sbjct: 11 YSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA 70
Query: 214 DYQGARFKAVVYK--------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
+ K V +K F P +LEE+ N +I +LD
Sbjct: 71 YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
+ Y PE LG + D++S G ++ E+ G
Sbjct: 188 TR---YYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 153 IGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSK-SFKSECKAAINIKHRNIVRVFTAF 210
+G G + +VY G + +A+K L G+ + E ++KH NIV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
+ +V++++ + L+++L DD N + KL + L Y
Sbjct: 70 -----HTEKSLTLVFEYL-DKDLKQYL---DDCG----NIINMHNVKL-FLFQLLRGLAY 115
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYIP 328
H + + H +LKP N+L+++ + DFG+AR +P N + + Y P
Sbjct: 116 CH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL----WYRP 168
Query: 329 PEYDLG-CEASTYGDVYSFGILLLEMFTGIRP 359
P+ LG + ST D++ G + EM TG RP
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATG-RP 199
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 58/253 (22%)
Query: 145 NGFSSANLIGAGNFGSVYNGTLFD------GTTIAVKVFNLIRPGGSKSFKSECKAAINI 198
N S +GAG FG V T + T+AVK +++P + + + + +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK---MLKPSAHLTEREALMSELKV 79
Query: 199 -----KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
H NIV + A + G V+ ++ G L +LR K D+ F+
Sbjct: 80 LSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDS--------FI 126
Query: 254 IKKK-----------------LDIAIDVACALRYLHC-DCQPPIAHCNLKPSNVLLDDEM 295
K L + VA + +L +C H +L N+LL
Sbjct: 127 CSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGR 182
Query: 296 IGHVGDFGMARFLPAIDKQNRFICIKGS----TGYIPPEYDLGCEASTYGDVYSFGILLL 351
I + DFG+AR + K + +KG+ ++ PE C + DV+S+GI L
Sbjct: 183 ITKICDFGLARDI----KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
Query: 352 EMFT-GIRPSDGI 363
E+F+ G P G+
Sbjct: 239 ELFSLGSSPYPGM 251
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 67 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 112
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 113 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 166
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 144 TNGFSSANLIGAGNFGSVYNGTLFDGTT-IAVKVFNLIRPGGSKSFKSECKAAIN--IKH 200
T+ + +G G F V T A K+ N + K E +A I +KH
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NIVR+ + S +G F +V+ + G L E + ++ + + + I + L+
Sbjct: 90 PNIVRLHDSISE---EG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILE- 141
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRF 317
++ ++H Q I H +LKP N+LL + G + DFG+A + +Q +
Sbjct: 142 ------SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAW 190
Query: 318 ICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
G+ GY+ PE YG D+++ G++L + G P
Sbjct: 191 FGFAGTPGYLSPEV---LRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI----AVKVFNLIRPGGSKSFKSECKAAINIKHRN 202
+ +G G F Y T D + V L++P + +E ++ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
+V F G ++ F VV + SL E L + P + +++ +
Sbjct: 104 VV----GFHGF-FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-EARYFMRQTIQ--- 153
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++YLH + + H +LK N+ L+D+M +GDFG+A + ++ + +C G
Sbjct: 154 ----GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC--G 204
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S D++S G +L + G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAI--NIKH 200
++ + +G G F V G A K+ N + K E +A I ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NIVR+ + Q F +V+ + G L E + ++ + + + I++ L+
Sbjct: 64 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILE- 115
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRF 317
++ Y H + I H NLKP N+LL + G + DFG+A ++ +
Sbjct: 116 ------SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAW 163
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ GY+ PE S D+++ G++L + G P
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 28/247 (11%)
Query: 125 VYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVF-NL 179
+ + + T PS +D IG G FG V+ G +A+K N
Sbjct: 370 IIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC 429
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
+ F E H +IV++ GV + + ++ + G L +L+
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTLGELRSFLQV 483
Query: 240 KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299
+ F+ + + A ++ AL YL H ++ NVL+ +
Sbjct: 484 R--------KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKL 532
Query: 300 GDFGMARFLPAIDKQNRFICIKGS--TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
GDFG++R++ + + KG ++ PE ++ DV+ FG+ + E+ G
Sbjct: 533 GDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 357 IRPSDGI 363
++P G+
Sbjct: 590 VKPFQGV 596
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG+A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT---IAVKVFNL-----IRPGGSKSFKS 190
D+ + + + +G G F +VY D T +A+K L + G +++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 191 ECKAAINIKHRNIVRVFTAFSGVDYQGARFK-AVVYKFMPNGSLEEWLRGKDDTNWRPLN 249
E K + H NI+ + AF G + ++V+ FM LE ++
Sbjct: 62 EIKLLQELSHPNIIGLLDAF------GHKSNISLVFDFM-ETDLEVIIKD---------- 104
Query: 250 FNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP 309
N L+ I + L+ L Q I H +LKP+N+LLD+ + + DFG+A+
Sbjct: 105 -NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163
Query: 310 AIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGI 357
+ ++ + + Y PE G A YG D+++ G +L E+ +
Sbjct: 164 SPNRAYXHQVV--TRWYRAPELLFG--ARMYGVGVDMWAVGCILAELLLRV 210
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAI--NIKH 200
++ + +G G F V G A K+ N + K E +A I ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NIVR+ + Q F +V+ + G L E + ++ + + + I++ L+
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILE- 116
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRF 317
++ Y H + I H NLKP N+LL + G + DFG+A ++ +
Sbjct: 117 ------SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAW 164
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ GY+ PE S D+++ G++L + G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 90/236 (38%), Gaps = 32/236 (13%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFN---LIRPGGSKSFKSEC 192
K++ + F +IG G F V + G A+K+ N +++ G F+ E
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNF 252
+N R I ++ AF Q + +V ++ G L L + P
Sbjct: 113 DVLVNGDRRWITQLHFAF-----QDENYLYLVMEYYVGGDLLTLLSKFGERI--PAEMAR 165
Query: 253 LIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDFGMARFLPA 310
++ +AID L Y+H D +KP N+LLD GH+ DFG L A
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRD---------IKPDNILLD--RCGHIRLADFGSCLKLRA 214
Query: 311 IDKQNRFICIKGSTGYIPPEYDLGCEASTYG-------DVYSFGILLLEMFTGIRP 359
D R + G+ Y+ PE D ++ G+ EMF G P
Sbjct: 215 -DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 62 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKKFMDASALTGI-PLP---LIKSYL- 110
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 111 --FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 166 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI----AVKVFNLIRPGGSKSFKSECKAAINIKHRN 202
+ +G G F Y T D + V L++P + +E ++ + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
+V F G ++ F VV + SL E L + P + +++ +
Sbjct: 88 VV----GFHGF-FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-EARYFMRQTIQ--- 137
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++YLH + + H +LK N+ L+D+M +GDFG+A + ++ + +C G
Sbjct: 138 ----GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC--G 188
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S D++S G +L + G P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D + + DFG+A ID N F I G+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPE 182
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 183 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-SMDLKKFMDASALTGI-PLP---LIKSYL- 112
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 113 --FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 168 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGTL-FDGTTIAVKVFNLIRPGGSKSFKSECKAAI--NIKH 200
++ + +G G F V G A K+ N + K E +A I ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NIVR+ + Q F +V+ + G L E + ++ + + + I++ L+
Sbjct: 65 PNIVRLHDSI-----QEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILE- 116
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRF 317
++ Y H + I H NLKP N+LL + G + DFG+A ++ +
Sbjct: 117 ------SIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAW 164
Query: 318 ICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ GY+ PE S D+++ G++L + G P
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 96/233 (41%), Gaps = 39/233 (16%)
Query: 142 NATNGFSSANLIGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKA 194
N + + + +G+G F V G + I + R G S+ + E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 195 AINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLI 254
I+H N++ + Y+ ++ + + G L ++L K+ +
Sbjct: 68 LKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFLAEKE---------SLTE 113
Query: 255 KKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPA 310
++ + + + YLH IAH +LKP N++L D + + DFG+A
Sbjct: 114 EEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---K 167
Query: 311 IDKQNRFICIKGSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
ID N F I G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D + + DFG+A ID N F I G+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPE 182
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 183 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 26/219 (11%)
Query: 143 ATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIK 199
+ F IG G +G VY G +A+K L G + E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ + + + +V++F+ + L+ ++ T PL LIK L
Sbjct: 64 HPNIVKLLDV---IHTENKLY--LVFEFL-HQDLKTFMDASALTGI-PLP---LIKSYL- 112
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+ L + H + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 113 --FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 318 ICIKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
+ + Y PE LGC+ ST D++S G + EM T
Sbjct: 168 VTL----WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 153 IGAGNFGSVYNGTLFDGTTIA-VKVFNLIRPGGSKSFKS----ECKAAINIKHRNIVRVF 207
+G+G +G+V + DG T A V + L RP S+ F E + +++H N++ +
Sbjct: 33 VGSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 208 TAFSGVDYQGARFKA--VVYKFMPN--GSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
F+ D F +V FM G L + + +D FL+ + L
Sbjct: 91 DVFTP-DETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED------RIQFLVYQMLK---- 139
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
LRY+H I H +LKP N+ ++++ + DFG+AR D + + +
Sbjct: 140 ---GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV--T 188
Query: 324 TGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
Y PE L T D++S G ++ EM TG
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI 327
L +LH +C I H +LKP N+L+ + DFG+AR Q + + Y
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVVVTLWYR 186
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMF 354
PE L +T D++S G + EMF
Sbjct: 187 APEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D + + DFG+A ID N F I G+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPE 182
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 183 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ +M G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 86/215 (40%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + F+ V + L+ ++ T PL LIK L
Sbjct: 64 VKLLDVIHTENKLYLVFEHV------HQDLKTFMDASALTGI-PLP---LIKSYL---FQ 110
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 166
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LGC+ ST D++S G + EM T
Sbjct: 167 ---WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D + + DFG+A ID N F I G+
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTPE 182
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 183 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 23/217 (10%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTI----AVKVFNLIRPGGSKSFKSECKAAINIKHRN 202
+ +G G F Y T D + V L++P + +E ++ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
+V F G ++ F VV + SL E L + P + +++ +
Sbjct: 104 VV----GFHGF-FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEP-EARYFMRQTIQ--- 153
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++YLH + + H +LK N+ L+D+M +GDFG+A + ++ + +C G
Sbjct: 154 ----GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC--G 204
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S D++S G +L + G P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 96/247 (38%), Gaps = 28/247 (11%)
Query: 125 VYEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFD----GTTIAVKVF-NL 179
+ + + T PS +D IG G FG V+ G +A+K N
Sbjct: 370 IIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC 429
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
+ F E H +IV++ GV + + ++ + G L +L+
Sbjct: 430 TSDSVREKFLQEALTMRQFDHPHIVKLI----GVITENPVW--IIMELCTLGELRSFLQV 483
Query: 240 KDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV 299
+ F+ + + A ++ AL YL H ++ NVL+ +
Sbjct: 484 R--------KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKL 532
Query: 300 GDFGMARFLPAIDKQNRFICIKGS--TGYIPPEYDLGCEASTYGDVYSFGILLLEMFT-G 356
GDFG++R++ + + KG ++ PE ++ DV+ FG+ + E+ G
Sbjct: 533 GDFGLSRYM---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 357 IRPSDGI 363
++P G+
Sbjct: 590 VKPFQGV 596
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 31/224 (13%)
Query: 141 YNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKS----ECKAA 195
+ + + + L+G G++G V D G +A+K F + K K E K
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLL 78
Query: 196 INIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIK 255
++H N+V + V + R+ +V++F+ + L DD P ++ +
Sbjct: 79 KQLRHENLVNLLE----VCKKKKRW-YLVFEFVDHTIL-------DDLELFPNGLDYQVV 126
Query: 256 KKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQN 315
+K I + H I H ++KP N+L+ + + DFG AR L A
Sbjct: 127 QKYLFQIINGIGFCHSH-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA--PGE 179
Query: 316 RFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTG 356
+ + Y PE +G YG DV++ G L+ EMF G
Sbjct: 180 VYDDEVATRWYRAPELLVG--DVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIK 199
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H ++VR F+A++ D+ + ++ GSL + + N+R +++ F + D
Sbjct: 68 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 117
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291
+ + V LRY+H + H ++KPSN+ +
Sbjct: 118 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIK 199
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H ++VR F+A++ D+ + ++ GSL + + N+R +++ F + D
Sbjct: 66 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 115
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291
+ + V LRY+H + H ++KPSN+ +
Sbjct: 116 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIK 199
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H ++VR F+A++ D+ + ++ GSL + + N+R +++ F + D
Sbjct: 70 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 119
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291
+ + V LRY+H + H ++KPSN+ +
Sbjct: 120 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 31/217 (14%)
Query: 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGS--KSFKSECKAAINIKHRNIVRVF 207
LIG G FG VY+G +A+++ ++ R K+FK E A +H N+V
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
A + A++ +L +R L+ N K IA ++
Sbjct: 96 GACMSPPHL-----AIITSLCKGRTLYSVVRDAKIV----LDVN----KTRQIAQEIVKG 142
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDD--EMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
+ YLH I H +LK NV D+ +I G F ++ L A ++++ G
Sbjct: 143 MGYLHAKG---ILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 326 YIPPEYDLGCEAST---------YGDVYSFGILLLEM 353
++ PE T + DV++ G + E+
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 144 TNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGG---SKSFKSECKAAINIK 199
T F IG+G FGSV+ DG A+K G + + A+ +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H ++VR F+A++ D+ + ++ GSL + + N+R +++ F + D
Sbjct: 68 HSHVVRYFSAWAEDDHM-----LIQNEYCNGGSLADAI----SENYRIMSY-FKEAELKD 117
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL 291
+ + V LRY+H + H ++KPSN+ +
Sbjct: 118 LLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + +C
Sbjct: 168 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGATWTLC- 220
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 221 -GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 31/221 (14%)
Query: 155 AGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSG 212
A F SV G D T +K + ++P GS + C A + RN+ ++ F
Sbjct: 1 ANQFYSVEVG---DSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 57
Query: 213 VDYQGARFKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL 258
+ ++ +V F P +LEE+ N +I+ +L
Sbjct: 58 QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL 117
Query: 259 D------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID 312
D + + C +++LH I H +LKPSN+++ + + DFG+AR
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 174
Query: 313 KQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
++ + Y PE LG D++S G ++ EM
Sbjct: 175 MMTPYVVTR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 95 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 139
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 95 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 139
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 197 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKW 180
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ IG G+FG V+ G D T V +I ++ + + I + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G + + ++ +++ GS + L PL+ + I ++
Sbjct: 67 VTKYYGSYLKDTKL-WIIMEYLGGGSALDLLEPG------PLDETQIA----TILREILK 115
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL + + DFG+A L K+N F+ G+
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV---GTPF 169
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE + D++S GI +E+ G P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ IG G+FG V+ G D T V +I ++ + + I + +
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G + + ++ +++ GS + L PL+ + I ++
Sbjct: 82 VTKYYGSYLKDTKL-WIIMEYLGGGSALDLLEPG------PLDETQIA----TILREILK 130
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL + + DFG+A L K+N F+ G+
Sbjct: 131 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV---GTPF 184
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE + D++S GI +E+ G P
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 148 AAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-----KGRTWXL 199
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE L + D ++ G+L+ EM G P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 150 ANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIR-------PGGSKSFKSECKAAINIKHRN 202
+L+G G++G V + D T+ + +++ P G + K E + ++H+N
Sbjct: 10 GDLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN 67
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
++++ + Q +V ++ G ++E L + + + + +D
Sbjct: 68 VIQLVDVLYNEEKQKM---YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLID--- 120
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
L YLH I H ++KP N+LL + G+A L + +G
Sbjct: 121 ----GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 323 STGYIPPEYDLGCEAST--YGDVYSFGILLLEMFTGIRPSDG 362
S + PPE G + + D++S G+ L + TG+ P +G
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 33/224 (14%)
Query: 147 FSSANLIGAGNFGSV----YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRN 202
+ +IG G FG V + + + F +I+ S F E
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI 262
+V++F AF Q ++ +V ++MP G L + D P + ++ +A+
Sbjct: 137 VVQLFCAF-----QDDKYLYMVMEYMPGGDLVNLMSNYD----VPEKWAKFYTAEVVLAL 187
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC--I 320
D ++ +H D +KP N+LLD + DFG +D+ C
Sbjct: 188 DAIHSMGLIHRD---------VKPDNMLLDKHGHLKLADFGTCM---KMDETGMVHCDTA 235
Query: 321 KGSTGYIPPEYDLGCEAST--YG---DVYSFGILLLEMFTGIRP 359
G+ YI PE L + YG D +S G+ L EM G P
Sbjct: 236 VGTPDYISPEV-LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ IG G+FG V+ G D T V +I ++ + + I + +
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G + + ++ +++ GS + L PL+ + I ++
Sbjct: 67 VTKYYGSYLKDTKL-WIIMEYLGGGSALDLLEPG------PLDETQIA----TILREILK 115
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL + + DFG+A L K+N F+ G+
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPF 169
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE + D++S GI +E+ G P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 49 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 108
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 169 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 226 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F+ IG G+FG V+ G D T V +I ++ + + I + +
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVAC 266
T + G + + ++ +++ GS + L PL+ + I ++
Sbjct: 87 VTKYYGSYLKDTKL-WIIMEYLGGGSALDLLEPG------PLDETQIAT----ILREILK 135
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAID-KQNRFICIKGSTG 325
L YLH + + H ++K +NVLL + + DFG+A L K+N F+ G+
Sbjct: 136 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV---GTPF 189
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE + D++S GI +E+ G P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 75 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 119
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 120 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 176
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 92/233 (39%), Gaps = 30/233 (12%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFN---LIRPGGSKSFKSECK 193
K++ F +IG G FG V + + I A+K+ N +++ + F+ E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 194 AAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
+N + I + AF Q +V + G L L +D P +
Sbjct: 143 VLVNGDCQWITALHYAF-----QDENHLYLVMDYYVGGDLLTLLSKFEDK--LPEDMARF 195
Query: 254 IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDFGMARFLPAI 311
++ +AID L Y+H D +KP NVLLD + GH+ DFG +
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRD---------IKPDNVLLD--VNGHIRLADFGSCLKMNDD 244
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCE--ASTYG---DVYSFGILLLEMFTGIRP 359
+ + G+ YI PE E YG D +S G+ + EM G P
Sbjct: 245 GTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 28/226 (12%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
K+LY + A +G G FG V+ + F ++ K E + +N
Sbjct: 1 KELYE---KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEI-SILN 56
Query: 198 I-KHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256
I +HRNI+ + +F ++ ++++F+ + E + +T+ LN ++
Sbjct: 57 IARHRNILHLHESFESMEEL-----VMIFEFISGLDIFERI----NTSAFELN-----ER 102
Query: 257 KLDIAIDVAC-ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDK 313
++ + C AL++LH I H +++P N++ + +FG AR L D
Sbjct: 103 EIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159
Query: 314 QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
F + + Y PE ST D++S G L+ + +GI P
Sbjct: 160 ---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP 202
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 93 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 137
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 138 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 194
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 195 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 85 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 129
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 130 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 186
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 180
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 181 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFIC 319
+ + YLH + H +LKPSN+L DE + DFG A+ L A + C
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 320 IKGSTGYIPPE------YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ ++ PE YD GC D++S GILL M G P
Sbjct: 187 Y--TANFVAPEVLKRQGYDEGC------DIWSLGILLYTMLAGYTP 224
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 73 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 117
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 118 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 175 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 92/233 (39%), Gaps = 30/233 (12%)
Query: 138 KDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFN---LIRPGGSKSFKSECK 193
K++ F +IG G FG V + + I A+K+ N +++ + F+ E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 194 AAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFL 253
+N + I + AF Q +V + G L L +D P +
Sbjct: 127 VLVNGDCQWITALHYAF-----QDENHLYLVMDYYVGGDLLTLLSKFEDK--LPEDMARF 179
Query: 254 IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDFGMARFLPAI 311
++ +AID L Y+H D +KP NVLLD + GH+ DFG +
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRD---------IKPDNVLLD--VNGHIRLADFGSCLKMNDD 228
Query: 312 DKQNRFICIKGSTGYIPPEYDLGCE--ASTYG---DVYSFGILLLEMFTGIRP 359
+ + G+ YI PE E YG D +S G+ + EM G P
Sbjct: 229 GTVQSSVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+++D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ PE + + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +LKP N+L++ E + DFG+AR +P + + + Y PE LGC+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEILLGCK 179
Query: 337 -ASTYGDVYSFGILLLEMFT 355
ST D++S G + EM T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +LKP N+L++ E + DFG+AR +P + + + Y PE LGC+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRAPEILLGCK 178
Query: 337 -ASTYGDVYSFGILLLEMFT 355
ST D++S G + EM T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 147 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIKH 200
+ +G G+FG V Y+ T G +A+K+ N L + + E ++H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
+I++++ D + ++ L +++ +D + + F
Sbjct: 64 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 110
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ A+ Y H + I H +LKP N+LLD+ + + DFG++ + N
Sbjct: 111 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS 162
Query: 321 KGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A DV+S G++L M P D
Sbjct: 163 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 39/247 (15%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKS 187
KQ +N K + + S +G+G +GSV + G +A+K L RP S+
Sbjct: 12 KQDVN----KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEI 65
Query: 188 FKSECKAAI----NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMP--NGSLEEWLRGKD 241
F + +++H N++ + F+ R Y MP L+
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPAS--SLRNFYDFYLVMPFMQTDLQ------- 116
Query: 242 DTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ + F +K + + L+Y+H + H +LKP N+ ++++ + D
Sbjct: 117 ----KIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILD 169
Query: 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPS 360
FG+AR A + ++ + Y PE L + D++S G ++ EM TG
Sbjct: 170 FGLARHADA--EMTGYVVTR---WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG---- 220
Query: 361 DGIFTGK 367
+F GK
Sbjct: 221 KTLFKGK 227
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 147 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIKH 200
+ +G G+FG V Y+ T G +A+K+ N L + + E ++H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 73
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
+I++++ D + ++ L +++ +D + + F
Sbjct: 74 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 120
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ A+ Y H + I H +LKP N+LLD+ + + DFG++ + N
Sbjct: 121 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS 172
Query: 321 KGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A DV+S G++L M P D
Sbjct: 173 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 147 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIKH 200
+ +G G+FG V Y+ T G +A+K+ N L + + E ++H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
+I++++ D + ++ L +++ +D + + F
Sbjct: 68 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 114
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ A+ Y H + I H +LKP N+LLD+ + + DFG++ + N
Sbjct: 115 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS 166
Query: 321 KGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A DV+S G++L M P D
Sbjct: 167 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVGDFGMARFLPAIDKQNRFIC 319
+ + YLH + H +LKPSN+L DE + DFG A+ L A + C
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 320 IKGSTGYIPPE------YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ ++ PE YD GC D++S GILL M G P
Sbjct: 187 Y--TANFVAPEVLKRQGYDEGC------DIWSLGILLYTMLAGYTP 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 30/222 (13%)
Query: 147 FSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFN---LIRPGGSKSFKSECKAAINIKH 200
+ +G G+FG V Y+ T G +A+K+ N L + + E ++H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 72
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
+I++++ D + ++ L +++ +D + + F
Sbjct: 73 PHIIKLYDVIKSKD------EIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ------- 119
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
+ A+ Y H + I H +LKP N+LLD+ + + DFG++ + N
Sbjct: 120 --QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTS 171
Query: 321 KGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPSD 361
GS Y PE G A DV+S G++L M P D
Sbjct: 172 CGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 49 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 108
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 109 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 168
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 169 LLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 226 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 256
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G G+VY + G +A++ NL + + +E K+ NIV ++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +++ GSL + + +T + ++ L AL +L
Sbjct: 89 VGDELW-----VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ-------ALEFL 133
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + + H N+K N+LL + + DFG A+ P K++ + G+ ++ PE
Sbjct: 134 HSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPE 187
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
YG D++S GI+ +EM G P
Sbjct: 188 V---VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCE-A 337
I H ++KP N+LLD+ + DFG+A +++ + G+ Y+ PE E
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 STYGDVYSFGILLLEMFTGIRPSD 361
+ DV+S GI+L M G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 101/247 (40%), Gaps = 39/247 (15%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKS 187
KQ +N K + + S +G+G +GSV + G +A+K L RP S+
Sbjct: 30 KQDVN----KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIK--KLSRPFQSEI 83
Query: 188 FKSECKAAI----NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMP--NGSLEEWLRGKD 241
F + +++H N++ + F+ R Y MP L+
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPAS--SLRNFYDFYLVMPFMQTDLQ------- 134
Query: 242 DTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGD 301
+ + F +K + + L+Y+H + H +LKP N+ ++++ + D
Sbjct: 135 ----KIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILD 187
Query: 302 FGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEMFTGIRPS 360
FG+AR A + ++ + Y PE L + D++S G ++ EM TG
Sbjct: 188 FGLARHADA--EMTGYVVTR---WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG---- 238
Query: 361 DGIFTGK 367
+F GK
Sbjct: 239 KTLFKGK 245
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 12 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 71
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 72 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 131
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 188
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 189 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++A L +L I + +LK NV+LD E + DFGM + + C
Sbjct: 127 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC- 182
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ YI PE D ++FG+LL EM G P +G
Sbjct: 183 -GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ Y+ P L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDD---EMIGHVGDFGMARFLPAIDKQNRFICIKGS 323
A+ YLH + I H +LKP N+L + + DFG+++ ++ Q + G+
Sbjct: 160 AVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI---VEHQVLMKTVCGT 213
Query: 324 TGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
GY PE GC D++S GI+ + G P
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ Y+ ++ + + G L ++L K+ + IK+ LD
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILD------ 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIK 321
+ YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 322 GSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 34/169 (20%)
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NIV++ F Q F +V + + G L E R K ++ +++++K
Sbjct: 65 HPNIVKLHEVFHD---QLHTF--LVMELLNGGELFE--RIKKKKHFSETEASYIMRK--- 114
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE---MIGHVGDFGMARFLPAIDKQNR 316
+ A+ ++H + H +LKP N+L DE + + DFG AR P ++ +
Sbjct: 115 ----LVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 317 FICIKGSTGYIPPE------YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
C + Y PE YD C D++S G++L M +G P
Sbjct: 168 TPCF--TLHYAAPELLNQNGYDESC------DLWSLGVILYTMLSGQVP 208
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 5 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 64
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 65 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 124
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 125 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 181
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 182 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 10 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 69
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 70 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 129
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 130 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 186
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 187 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVK--VFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G FG V+ G +A+K + + G + E K +KH N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL-DIAIDVACAL 268
R KA +Y E L G L N L+K L +I + L
Sbjct: 86 CRTKASPYNRCKASIYLVF--DFCEHDLAG--------LLSNVLVKFTLSEIKRVMQMLL 135
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-FLPAIDKQ-NRFICIKGSTGY 326
L+ + I H ++K +NVL+ + + + DFG+AR F A + Q NR+ + Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFT 355
PPE LG YG D++ G ++ EM+T
Sbjct: 196 RPPELLLG--ERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 124 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 180
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 181 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 12 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 71
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 72 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 131
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + C +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 132 LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 188
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 189 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 22/112 (19%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD----DEMIGHVGDFGMARFLPAIDKQN 315
I V + YLH + I H +LKP N+LL+ D +I V DFG++ + Q
Sbjct: 141 IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIV-DFGLS---AVFENQK 193
Query: 316 RFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
+ G+ YI PE YD C DV+S G++L + G P G
Sbjct: 194 KMKERLGTAYYIAPEVLRKKYDEKC------DVWSIGVILFILLAGYPPFGG 239
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 153 IGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHR----NIVR 205
+G GNFGSV G +A+KV ++ G K+ E I H+ IVR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKV---LKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ A +V + G L ++L GK + + ++ V+
Sbjct: 401 LIGVCQ------AEALMLVMEMAGGGPLHKFLVGKRE--------EIPVSNVAELLHQVS 446
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL + H NL NVLL + + DFG+++ L A D + + +
Sbjct: 447 MGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARSAGK 500
Query: 326 YIPPEYDLGC----EASTYGDVYSFGILLLEMFT-GIRP 359
+ Y C + S+ DV+S+G+ + E + G +P
Sbjct: 501 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T G +AVK +L + + +E + H N+V +++++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N ++ + + V AL YL
Sbjct: 113 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNE----EQIATVCLSVLRALSYL 157
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG A+ + K+ + G+ ++ PE
Sbjct: 158 HNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV---GTPYWMAPE 211
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
T D++S GI+++EM G P
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ Y+ ++ + + G L ++L K+ + IK+ LD
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEE--EATSFIKQILD------ 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIK 321
+ YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 322 GSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 153 IGAGNFGSVYN-GTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKHRNIVRVFTA 209
+G G F V + G A K+ N + K E +A I +KH NIVR+ +
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
S +G F +V+ + G L E + ++ + + + I++ L+ ++
Sbjct: 72 ISE---EG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILE-------SVN 117
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFICIKGSTGY 326
+ H + I H +LKP N+LL + G + DFG+A + Q + G+ GY
Sbjct: 118 HCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ PE YG D+++ G++L + G P
Sbjct: 173 LSPEV---LRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ Y+ ++ + + G L ++L K+ + IK+ LD
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATS--FIKQILD------ 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIK 321
+ YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 322 GSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 100/243 (41%), Gaps = 48/243 (19%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGGS 185
+Q +N K ++ +G+G +GSV Y+ L +AVK L RP S
Sbjct: 16 RQELN----KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQS 67
Query: 186 ----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD 241
+ E + ++KH N++ + F+ P S+E++
Sbjct: 68 LIHARRTYRELRLLKHLKHENVIGLLDVFT-----------------PATSIEDFSEVYL 110
Query: 242 DTNWRPLNFNFLIKKKLD-------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
T + N ++K + + + L+Y+H I H +LKPSNV ++++
Sbjct: 111 VTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNED 167
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEM 353
+ DFG+AR A ++ ++ + Y PE L + D++S G ++ E+
Sbjct: 168 SELRILDFGLAR--QADEEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 354 FTG 356
G
Sbjct: 223 LQG 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 144 TNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAIN--IKH 200
T+ + +G G F V + G A K+ N + K E +A I +KH
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
NIVR+ + S +G F +V+ + G L E + ++ + + + I++ L+
Sbjct: 63 PNIVRLHDSISE---EG--FHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILE- 114
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRF 317
++ + H + I H +LKP N+LL + G + DFG+A + Q +
Sbjct: 115 ------SVNHCHLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAW 163
Query: 318 ICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
G+ GY+ PE YG D+++ G++L + G P
Sbjct: 164 FGFAGTPGYLSPEV---LRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F ++G G +G V+ G K+F + + ++ A RNI+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLE---EWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
VD ++Y F G L E+L G + F+ +
Sbjct: 78 VKHPFIVD--------LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFICIK 321
++ AL +LH Q I + +LKP N++L+ + GHV DFG+ + C
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKESIHDGTVTHXFC-- 182
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367
G+ Y+ PE + + D +S G L+ +M TG P FTG+
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRV 206
F ++G G +G V+ G K+F + + ++ A RNI+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 207 FTAFSGVDYQGARFKAVVYKFMPNGSLE---EWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
VD ++Y F G L E+L G + F+ +
Sbjct: 78 VKHPFIVD--------LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE 129
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRFICIK 321
++ AL +LH Q I + +LKP N++L+ + GHV DFG+ + C
Sbjct: 130 ISMALGHLH---QKGIIYRDLKPENIMLNHQ--GHVKLTDFGLCKESIHDGTVTHTFC-- 182
Query: 322 GSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTGK 367
G+ Y+ PE + + D +S G L+ +M TG P FTG+
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP----FTGE 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ Y+ ++ + + G L ++L K+ + IK+ LD
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATS--FIKQILD------ 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIK 321
+ YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 322 GSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 39/222 (17%)
Query: 153 IGAGNFGSVYN------GTLFDGTTIAVKVFNLIRPGGSKS-FKSECKAAINIKHRNIVR 205
+G+G F V G + I + R G S+ + E + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ Y+ ++ + + G L ++L K+ + IK+ LD
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATS--FIKQILD------ 126
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIK 321
+ YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I
Sbjct: 127 -GVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIF 179
Query: 322 GSTGYIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ ++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 438 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 482
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 483 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 539
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 540 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++A L +L I + +LK NV+LD E + DFGM + + C
Sbjct: 448 AAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC- 503
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
G+ YI PE D ++FG+LL EM G P +G
Sbjct: 504 -GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIR-PGGSKSFKSECKAAINIKHR----NIVRVF 207
+G+GNFG+V G + +++ + K E A N+ + IVR+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
+ +V + G L ++L+ N + K +++ V+
Sbjct: 437 GICEAESWM------LVMEMAELGPLNKYLQQ---------NRHVKDKNIIELVHQVSMG 481
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI-KGSTGY 326
++YL + H +L NVLL + + DFG+++ L A + + K +
Sbjct: 482 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 538
Query: 327 IPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
PE + S+ DV+SFG+L+ E F+ G +P G+
Sbjct: 539 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 116
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 117 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 165 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 115
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 116 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 163
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 164 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 116
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 117 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 165 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 255
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 256 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 303
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 304 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A + YLH + + +LKP N+L+D + V DFG A+ + + R +
Sbjct: 147 AAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-----KGRTWXL 198
Query: 321 KGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ + PE L + D ++ G+L+ EM G P
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 35/219 (15%)
Query: 153 IGAGNFGSVYNGTLF---DGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHR----NIVR 205
+G GNFGSV G +A+KV ++ G K+ E I H+ IVR
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKV---LKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ A +V + G L ++L GK + + ++ V+
Sbjct: 75 LIGVCQ------AEALMLVMEMAGGGPLHKFLVGKRE--------EIPVSNVAELLHQVS 120
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
++YL + H +L NVLL + + DFG+++ L A D + + +
Sbjct: 121 MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARSAGK 174
Query: 326 YIPPEYDLGC----EASTYGDVYSFGILLLEMFT-GIRP 359
+ Y C + S+ DV+S+G+ + E + G +P
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 116
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 117 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 165 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 18/98 (18%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEM--IGHVG--DFGMARFLPAIDKQNRFICIKGSTG 325
YLH IAH +LKP N++L D+ I H+ DFG+A I+ F I G+
Sbjct: 130 YLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFGTPE 183
Query: 326 YIPPE---YD-LGCEASTYGDVYSFGILLLEMFTGIRP 359
++ PE Y+ LG EA D++S G++ + +G P
Sbjct: 184 FVAPEIVNYEPLGLEA----DMWSIGVITYILLSGASP 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 122
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 123 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 170
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 171 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 65/252 (25%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKS--FKS--- 190
F+D+Y T + L+G G + V +L +G AVK+ + G S+S F+
Sbjct: 10 FEDMYKLT-----SELLGEGAYAKVQGAVSLQNGKEYAVKIIEK-QAGHSRSRVFREVET 63
Query: 191 --ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
+C+ ++NI+ + F RF +V++ + GS+ ++ + N R
Sbjct: 64 LYQCQG-----NKNILELIEFFE----DDTRF-YLVFEKLQGGSILAHIQKQKHFNEREA 113
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDD-EMIGHVG--DFGMA 305
+ + DVA AL +LH IAH +LKP N+L + E + V DF +
Sbjct: 114 S---------RVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLG 161
Query: 306 RFL-------PAIDKQNRFICIKGSTGYIPPE-----------YDLGCEASTYGDVYSFG 347
+ P + C GS Y+ PE YD C D++S G
Sbjct: 162 SGMKLNNSCTPITTPELTTPC--GSAEYMAPEVVEVFTDQATFYDKRC------DLWSLG 213
Query: 348 ILLLEMFTGIRP 359
++L M +G P
Sbjct: 214 VVLYIMLSGYPP 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 89/219 (40%), Gaps = 46/219 (21%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAF 210
IG G +G VY G T A+K L + G + E +KH NIV+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI---AIDVACA 267
V + R +V++ + +KK LD+ ++ A
Sbjct: 67 -DVIHTKKRL-VLVFEHLDQD----------------------LKKLLDVCEGGLESVTA 102
Query: 268 LRYL--------HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-FLPAIDKQNRFI 318
+L +C + + H +LKP N+L++ E + DFG+AR F + K I
Sbjct: 103 KSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 319 CIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
+ Y P+ +G + ST D++S G + EM G
Sbjct: 162 V---TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 27/177 (15%)
Query: 189 KSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
++E + + H I+++ F DY +V + M G L + + G
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFDKVVGNKRLKEATC 241
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---DDEMIGHVGDFGMA 305
F + A++YLH + I H +LKP NVLL +++ + + DFG +
Sbjct: 242 KLYFY---------QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
Query: 306 RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ L R +C G+ Y+ PE + + Y D +S G++L +G P
Sbjct: 290 KILGETSLM-RTLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 87/222 (39%), Gaps = 34/222 (15%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + F+ + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KFSLDLASLILYAYQLSTA 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYI 327
L YL H ++ NVL+ +GDFG++R++ K S G +
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX------KASKGKL 174
Query: 328 P-----PEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
P PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G G+VY + G +A++ NL + + +E K+ NIV ++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +++ GSL + + +T + ++ L AL +L
Sbjct: 88 VGDELW-----VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ-------ALEFL 132
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + + H ++K N+LL + + DFG A+ P K++ + G+ ++ PE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV---GTPYWMAPE 186
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
YG D++S GI+ +EM G P
Sbjct: 187 V---VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVK--VFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G FG V+ G +A+K + + G + E K +KH N+V +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL-DIAIDVACAL 268
R K +Y E L G L N L+K L +I + L
Sbjct: 86 CRTKASPYNRCKGSIYLVF--DFCEHDLAG--------LLSNVLVKFTLSEIKRVMQMLL 135
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-FLPAIDKQ-NRFICIKGSTGY 326
L+ + I H ++K +NVL+ + + + DFG+AR F A + Q NR+ + Y
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFT 355
PPE LG YG D++ G ++ EM+T
Sbjct: 196 RPPELLLG--ERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 47/240 (19%)
Query: 131 TINNPSFKDLY---NATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSK 186
++ +P +L+ + FS IG G+FG+VY + + +A+K + ++
Sbjct: 37 SLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 187 SFK---SECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN---GSLEEWLRGK 240
++ E + ++H N ++ Y+G + + GS + L
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQ---------YRGCYLREHTAWLVMEYCLGSASDLL--- 144
Query: 241 DDTNWRPLNFNFLIKKKLDIAIDVACALR---YLHCDCQPPIAHCNLKPSNVLLDDEMIG 297
+ + +PL ++++IA AL+ YLH + H ++K N+LL + +
Sbjct: 145 -EVHKKPL-------QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 193
Query: 298 HVGDFGMARFL-PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEM 353
+GDFG A + PA N F+ G+ ++ PE L + Y DV+S GI +E+
Sbjct: 194 KLGDFGSASIMAPA----NXFV---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 97/245 (39%), Gaps = 43/245 (17%)
Query: 128 GKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTT--IAVKVFNLIRPGGS 185
G +I ++ T+G+ IG G++ SV + T AVK+ + + +
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPT 63
Query: 186 KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSL-EEWLRGKDDTN 244
+ + + +H NI+ + Y ++ VV + G L ++ LR K +
Sbjct: 64 EEIEILLRYG---QHPNIITLKDV-----YDDGKYVYVVTELXKGGELLDKILRQKFFSE 115
Query: 245 WRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG----HVG 300
F I K ++ YLH + H +LKPSN+L DE +
Sbjct: 116 REASAVLFTITKTVE----------YLHAQG---VVHRDLKPSNILYVDESGNPESIRIC 162
Query: 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPE------YDLGCEASTYGDVYSFGILLLEMF 354
DFG A+ L A + C + ++ PE YD C D++S G+LL
Sbjct: 163 DFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAAC------DIWSLGVLLYTXL 214
Query: 355 TGIRP 359
TG P
Sbjct: 215 TGYTP 219
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 72 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 118
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 174
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LG + ST D++S G + EM T
Sbjct: 175 ---WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAF 210
IG G +G VY G T A+K L + G + E +KH NIV+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI---AIDVACA 267
V + R +V++ + +KK LD+ ++ A
Sbjct: 67 -DVIHTKKRL-VLVFEHLDQD----------------------LKKLLDVCEGGLESVTA 102
Query: 268 LRYL--------HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+L +C + + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 103 KSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 318 ICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
+ + Y P+ +G + ST D++S G + EM G
Sbjct: 162 VTL----WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVG----DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG 334
I HC+LKP N+LL + G G DFG + + + Q + I+ S Y PE LG
Sbjct: 221 IIHCDLKPENILLKQQ--GRSGIKVIDFGSSCY----EHQRVYTXIQ-SRFYRAPEVILG 273
Query: 335 CEASTYGDVYSFGILLLEMFTG 356
D++S G +L E+ TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G G+VY + G +A++ NL + + +E K+ NIV ++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +++ GSL + + +T + ++ L AL +L
Sbjct: 88 VGDELW-----VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ-------ALEFL 132
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + + H ++K N+LL + + DFG A+ P K++ + G+ ++ PE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPE 186
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
YG D++S GI+ +EM G P
Sbjct: 187 V---VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G G+VY + G +A++ NL + + +E K+ NIV ++
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +++ GSL + + +T + ++ L AL +L
Sbjct: 89 VGDELW-----VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ-------ALEFL 133
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + + H ++K N+LL + + DFG A+ P K++ + G+ ++ PE
Sbjct: 134 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPE 187
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
YG D++S GI+ +EM G P
Sbjct: 188 V---VTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 48/220 (21%)
Query: 153 IGAGNFGSVYNGTLFDGTTIAVKVFNLIRP--GGSKSFKSECKAAINIKHRNIVRVFTAF 210
IG G +G VY G T A+K L + G + E +KH NIV+++
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY--- 66
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI---AIDVACA 267
V + R +V++ + +KK LD+ ++ A
Sbjct: 67 -DVIHTKKRL-VLVFEHLDQD----------------------LKKLLDVCEGGLESVTA 102
Query: 268 LRYL--------HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRF 317
+L +C + + H +LKP N+L++ E + DFG+AR +P +
Sbjct: 103 KSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 318 ICIKGSTGYIPPEYDLGCEA-STYGDVYSFGILLLEMFTG 356
+ + Y P+ +G + ST D++S G + EM G
Sbjct: 162 VTL----WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 11/209 (5%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G G V++ D +A+K L P K E K + H NIV+VF
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAI-DVACALRY 270
Q + + ++E++ D N L L+++ + + + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYME-TDLANV--LEQGPLLEEHARLFMYQLLRGLKY 135
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDE-MIGHVGDFGMARFL-PAIDKQNRFICIKGSTGYIP 328
+H + H +LKP+N+ ++ E ++ +GDFG+AR + P + + Y
Sbjct: 136 IHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 329 PEYDLGCEASTYG-DVYSFGILLLEMFTG 356
P L T D+++ G + EM TG
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 90/212 (42%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G G+VY + G +A++ NL + + +E K+ NIV ++
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +++ GSL + + +T + ++ L AL +L
Sbjct: 88 VGDELW-----VVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQ-------ALEFL 132
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + + H ++K N+LL + + DFG A+ P K++ + G+ ++ PE
Sbjct: 133 HSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPE 186
Query: 331 YDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
YG D++S GI+ +EM G P
Sbjct: 187 V---VTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGGS 185
+Q +N K ++ +G+G +GSV Y+ L +AVK L RP S
Sbjct: 16 RQELN----KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQS 67
Query: 186 ----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD 241
+ E + ++KH N++ + F+ P S+E++
Sbjct: 68 LIHARRTYRELRLLKHLKHENVIGLLDVFT-----------------PATSIEDFSEVYL 110
Query: 242 DTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
T + N ++K + L + + L+Y+H I H +LKPSNV ++++
Sbjct: 111 VTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNED 167
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEM 353
+ DFG+AR A ++ ++ + Y PE L + D++S G ++ E+
Sbjct: 168 SELRILDFGLAR--QADEEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 354 FTG 356
G
Sbjct: 223 LQG 225
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVR 205
GF+ I + V+ G + + L++P + E ++ H+++V
Sbjct: 27 GFAKCFEISDADTKEVFAGKIVPKSL-------LLKPHQREKMSMEISIHRSLAHQHVV- 78
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
F G ++ F VV + SL E L + P +L + I +
Sbjct: 79 ---GFHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ------IVLG 127
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
C +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G+
Sbjct: 128 C--QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--GTPN 180
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
YI PE S DV+S G ++ + G P
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 214
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVG----DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG 334
I HC+LKP N+LL + G G DFG + + + Q + I+ S Y PE LG
Sbjct: 221 IIHCDLKPENILLKQQ--GRSGIKVIDFGSSCY----EHQRVYTXIQ-SRFYRAPEVILG 273
Query: 335 CEASTYGDVYSFGILLLEMFTG 356
D++S G +L E+ TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 26/219 (11%)
Query: 153 IGAGNFGSVY-NGTLFDGTTIAVKVFNLIRPG-GSKSFKSECKAAINIKHRNIVRVFTAF 210
+G+G FG V+ G +K N R + ++E + ++ H NI+++F F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 211 SGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRY 270
DY +V + G L E + + L+ ++ ++ + AL Y
Sbjct: 90 E--DYHNMY---IVMETCEGGELLERIVSAQ-ARGKALSEGYVA----ELMKQMMNALAY 139
Query: 271 LHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFICIKGSTGYI 327
H + H +LKP N+L D + DFG+A + + G+ Y+
Sbjct: 140 FHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN---AAGTALYM 193
Query: 328 PPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
PE + + D++S G+++ + TG P FTG
Sbjct: 194 APEV-FKRDVTFKCDIWSAGVVMYFLLTGCLP----FTG 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-FLPAIDKQ-NRFICIKGSTG 325
L Y+H + I H ++K +NVL+ + + + DFG+AR F A + Q NR+ +
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 326 YIPPEYDLGCEASTYG---DVYSFGILLLEMFT 355
Y PPE LG YG D++ G ++ EM+T
Sbjct: 195 YRPPELLLG--ERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHV--GDFGMARFLPAIDKQNRFICI 320
++ AL +LH + I + ++K N+LLD GHV DFG+++ A D+ R
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSN--GHVVLTDFGLSKEFVA-DETERAYDF 220
Query: 321 KGSTGYIPPEYDLGCEA--STYGDVYSFGILLLEMFTGIRP 359
G+ Y+ P+ G ++ D +S G+L+ E+ TG P
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + F+ + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KFSLDLASLILYAYQLSTA 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 177
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 147 FSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNL--IRPGGSKSFKSECKAAINIKHRNI 203
F IG G +G VY G +A+K L G + E + H NI
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
V++ + + + +V++F+ + L++++ T PL LIK L
Sbjct: 65 VKLLDV---IHTENKLY--LVFEFL-HQDLKKFMDASALTGI-PLP---LIKSYL---FQ 111
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIK 321
+ L + H + H +LKP N+L++ E + DFG+AR +P + + +
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL- 167
Query: 322 GSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFT 355
Y PE LG + ST D++S G + EM T
Sbjct: 168 ---WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 46/231 (19%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFK---SEC 192
FKD + FS IG G+FG+VY + + +A+K + ++ ++ E
Sbjct: 9 FKD--DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV 66
Query: 193 KAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPN---GSLEEWLRGKDDTNWRPLN 249
+ ++H N ++ Y+G + + GS + L + + +PL
Sbjct: 67 RFLQKLRHPNTIQ---------YRGCYLREHTAWLVMEYCLGSASDLL----EVHKKPL- 112
Query: 250 FNFLIKKKLDIAIDVACALR---YLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
++++IA AL+ YLH + H ++K N+LL + + +GDFG A
Sbjct: 113 ------QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSAS 163
Query: 307 FL-PAIDKQNRFICIKGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEM 353
+ PA N F+ G+ ++ PE L + Y DV+S GI +E+
Sbjct: 164 IMAPA----NXFV---GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVG----DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG 334
I HC+LKP N+LL + G G DFG + + + Q + I+ S Y PE LG
Sbjct: 221 IIHCDLKPENILLKQQ--GRSGIKVIDFGSSCY----EHQRVYXXIQ-SRFYRAPEVILG 273
Query: 335 CEASTYGDVYSFGILLLEMFTG 356
D++S G +L E+ TG
Sbjct: 274 ARYGMPIDMWSLGCILAELLTG 295
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVK--VFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G FG V+ G +A+K + + G + E K +KH N+V +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKL-DIAIDVACAL 268
R K +Y E L G L N L+K L +I + L
Sbjct: 85 CRTKASPYNRCKGSIYLVF--DFCEHDLAG--------LLSNVLVKFTLSEIKRVMQMLL 134
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMAR-FLPAIDKQ-NRFICIKGSTGY 326
L+ + I H ++K +NVL+ + + + DFG+AR F A + Q NR+ + Y
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 327 IPPEYDLGCEASTYG---DVYSFGILLLEMFT 355
PPE LG YG D++ G ++ EM+T
Sbjct: 195 RPPELLLG--ERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 48/243 (19%)
Query: 129 KQTINNPSFKDLYNATNGFSSANLIGAGNFGSV---YNGTLFDGTTIAVKVFNLIRPGGS 185
+Q +N K ++ +G+G +GSV Y+ L +AVK L RP S
Sbjct: 8 RQELN----KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARL--RQKVAVK--KLSRPFQS 59
Query: 186 ----KSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKD 241
+ E + ++KH N++ + F+ P S+E++
Sbjct: 60 LIHARRTYRELRLLKHLKHENVIGLLDVFT-----------------PATSIEDFSEVYL 102
Query: 242 DTNWRPLNFNFLIK-KKLD------IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE 294
T + N ++K + L + + L+Y+H I H +LKPSNV ++++
Sbjct: 103 VTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNED 159
Query: 295 MIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLG-CEASTYGDVYSFGILLLEM 353
+ DFG+AR A ++ ++ + Y PE L + D++S G ++ E+
Sbjct: 160 CELRILDFGLAR--QADEEMTGYVATR---WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 354 FTG 356
G
Sbjct: 215 LQG 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G
Sbjct: 147 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--G 201
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S DV+S G ++ + G P
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G
Sbjct: 149 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC--G 203
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S DV+S G ++ + G P
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 87/230 (37%), Gaps = 31/230 (13%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
+++ N FS +IG G FG VY D G A+K + K K + +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLA 235
Query: 198 IKHRNIVRV-------FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
+ R ++ + F + + + M G L L + + F
Sbjct: 236 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 251 NFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
A ++ L ++H + + +LKP+N+LLD+ + D G+A
Sbjct: 296 ---------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA---CD 340
Query: 311 IDKQNRFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
K+ + G+ GY+ PE G + D +S G +L ++ G P
Sbjct: 341 FSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 87/230 (37%), Gaps = 31/230 (13%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
+++ N FS +IG G FG VY D G A+K + K K + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLA 236
Query: 198 IKHRNIVRV-------FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
+ R ++ + F + + + M G L L + + F
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 251 NFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
A ++ L ++H + + +LKP+N+LLD+ + D G+A
Sbjct: 297 ---------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA---CD 341
Query: 311 IDKQNRFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
K+ + G+ GY+ PE G + D +S G +L ++ G P
Sbjct: 342 FSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 87/230 (37%), Gaps = 31/230 (13%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
+++ N FS +IG G FG VY D G A+K + K K + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLA 236
Query: 198 IKHRNIVRV-------FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
+ R ++ + F + + + M G L L + + F
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 251 NFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
A ++ L ++H + + +LKP+N+LLD+ + D G+A
Sbjct: 297 ---------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA---CD 341
Query: 311 IDKQNRFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
K+ + G+ GY+ PE G + D +S G +L ++ G P
Sbjct: 342 FSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 87/230 (37%), Gaps = 31/230 (13%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAIN 197
+++ N FS +IG G FG VY D G A+K + K K + +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD------KKRIKMKQGETLA 236
Query: 198 IKHRNIVRV-------FTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNF 250
+ R ++ + F + + + M G L L + + F
Sbjct: 237 LNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 251 NFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPA 310
A ++ L ++H + + +LKP+N+LLD+ + D G+A
Sbjct: 297 ---------YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA---CD 341
Query: 311 IDKQNRFICIKGSTGYIPPE-YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
K+ + G+ GY+ PE G + D +S G +L ++ G P
Sbjct: 342 FSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRF 317
IA+ + AL +LH + H ++KPSNVL++ +G V DFG++ +L +D +
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKMCDFGISGYL--VDSVAKT 211
Query: 318 ICIKGSTGYIPPEY---DLGCEA-STYGDVYSFGILLLEM 353
I G Y+ PE +L + S D++S GI ++E+
Sbjct: 212 ID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 177
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 99 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 143
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 144 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 197
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 198 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 142 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 186
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 187 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 240
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 241 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 219 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 263
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 264 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 317
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 318 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 97 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 141
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 142 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 195
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 196 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 88 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 132
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 133 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 186
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--G 179
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S DV+S G ++ + G P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G
Sbjct: 125 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--G 179
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S DV+S G ++ + G P
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 216
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 106 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 151
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 152 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 205
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 244
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
+ +YLH + + H +LK N+ L++++ +GDFG+A + ++ + +C G
Sbjct: 129 QIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC--G 183
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ YI PE S DV+S G ++ + G P
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 78 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 123
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 177
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 216
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 80 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 125
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 126 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 179
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVF--NLIRPGGSKSFKSECKAAINIKHRNIVRVFTA 209
IG G++G V+ D G +A+K F + P K E + +KH N+V +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 210 FSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALR 269
F + R +V+++ + L E R + L+K I A+
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQRGVP------EHLVK---SITWQTLQAVN 116
Query: 270 YLH-CDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIP 328
+ H +C H ++KP N+L+ + + DFG AR L + + + Y
Sbjct: 117 FCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRS 170
Query: 329 PEYDLGCEASTYG---DVYSFGILLLEMFTGI 357
PE +G + YG DV++ G + E+ +G+
Sbjct: 171 PELLVG--DTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 75 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 120
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 121 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 174
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 213
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 81 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 126
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 127 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 180
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 181 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGST----GYIPPEYDLGCE 336
H +L N+LL + + + DFG+AR + +N KG T ++ PE
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDI----YKNPDYVRKGDTRLPLKWMAPESIFDKI 277
Query: 337 ASTYGDVYSFGILLLEMFT-GIRPSDGI 363
ST DV+S+G+LL E+F+ G P G+
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSVYNGTLFD-GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V T+ G +AVK +L + + +E + +H N+V ++ ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
D VV +F+ G+L + + T+ R +N + + + V AL L
Sbjct: 92 VGDELW-----VVMEFLEGGALTDIV-----THTR-MNEEQIAA----VCLAVLQALSVL 136
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQ-NRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG F + K+ R + G+ ++ PE
Sbjct: 137 HAQG---VIHRDIKSDSILLTHDGRVKLSDFG---FCAQVSKEVPRRKXLVGTPYWMAPE 190
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
D++S GI+++EM G P
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 28/219 (12%)
Query: 153 IGAGNFGSVYNGTLFD----GTTIAVKVF-NLIRPGGSKSFKSECKAAINIKHRNIVRVF 207
IG G FG V+ G +A+K N + F E H +IV++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 208 TAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACA 267
GV + + ++ + G L +L+ + ++ + + A ++ A
Sbjct: 83 ----GVITENPVW--IIMELCTLGELRSFLQVR--------KYSLDLASLILYAYQLSTA 128
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGS--TG 325
L YL H ++ NVL+ +GDFG++R++ + + KG
Sbjct: 129 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK 182
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT-GIRPSDGI 363
++ PE ++ DV+ FG+ + E+ G++P G+
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 11 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 70
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 71 YRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 131 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV 187
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 188 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 28/214 (13%)
Query: 162 YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIV--RVFTAFSGVDYQGAR 219
Y+ + D T +K + ++P GS + C A + RN+ ++ F +
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63
Query: 220 FKAVVYK--------------FMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD------ 259
++ +V F P +LEE+ N +I+ +LD
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY 123
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
+ + +++LH I H +LKPSN+++ + + DFG+AR ++
Sbjct: 124 LLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVV 180
Query: 320 IKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
+ Y PE LG D++S G ++ EM
Sbjct: 181 TR---YYRAPEVILGMGYKENVDIWSVGCIMGEM 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 152 LIGAGNFGSVYN-GTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFT 208
++G G+FG V AVKV N + + + E + + H NI+++F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK-------LDIA 261
+ F +V + G L F+ +IK+K I
Sbjct: 89 ILED----SSSF-YIVGELYTGGEL----------------FDEIIKRKRFSEHDAARII 127
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFI 318
V + Y+H + I H +LKP N+LL+ + + DFG++ K I
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 319 CIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ YI PE YD C DV+S G++L + +G P
Sbjct: 185 ---GTAYYIAPEVLRGTYDEKC------DVWSAGVILYILLSGTPP 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAI--------------- 311
++YLH + H ++KPSN+LL+ E V DFG++R I
Sbjct: 121 VIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 312 ----DKQNRFICIKGSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTG 356
D Q + Y PE LG T G D++S G +L E+ G
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICI 320
A ++ AL +LH I + +LK NVLLD E + DFGM + C
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC- 185
Query: 321 KGSTGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
G+ YI PE + YG D ++ G+LL EM G P
Sbjct: 186 -GTPDYIAPEI---LQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
D+ + L +LH + H +LKP N+L+ + DFG+AR Q
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 23/209 (11%)
Query: 153 IGAGNFGSV-YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
IG G+ G V G +AVK+ +L + + +E + +H N+V ++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS-- 110
Query: 212 GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYL 271
Y V+ +F+ G+L D + LN + + V AL YL
Sbjct: 111 ---YLVGEELWVLMEFLQGGAL------TDIVSQVRLNEEQIAT----VCEAVLQALAYL 157
Query: 272 HCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGM-ARFLPAIDKQNRFICIKGSTGYIPPE 330
H + H ++K ++LL + + DFG A+ + K+ + G+ ++ PE
Sbjct: 158 HAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV---GTPYWMAPE 211
Query: 331 YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+T D++S GI+++EM G P
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 20/92 (21%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPE-------- 330
+ H ++KPSN+LLD+ + DFG++ L ++R G Y+ PE
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA---GCAAYMAPERIDPPDPT 202
Query: 331 ---YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
YD+ DV+S GI L+E+ TG P
Sbjct: 203 KPDYDI------RADVWSLGISLVELATGQFP 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L N+LL ++ + + DFG+AR + R + ++ PE +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+LL E+F+ G P G+
Sbjct: 274 SDVWSFGVLLWEIFSLGASPYPGV 297
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 26/170 (15%)
Query: 197 NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256
++ H NI+++F F + ++ +V +F G L E + + F
Sbjct: 102 SLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINR---------HKFDECD 147
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE---MIGHVGDFGMARFLPAIDK 313
+I + + YLH + I H ++KP N+LL+++ + + DFG++ F K
Sbjct: 148 AANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 314 -QNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
++R G+ YI PE L + + DV+S G+++ + G P G
Sbjct: 205 LRDRL----GTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGG 249
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L N+LL ++ + + DFG+AR + R + ++ PE +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+LL E+F+ G P G+
Sbjct: 281 SDVWSFGVLLWEIFSLGASPYPGV 304
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
D+ + L +LH + H +LKP N+L+ + DFG+AR Q
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L N+LL ++ + + DFG+AR + R + ++ PE +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+LL E+F+ G P G+
Sbjct: 276 SDVWSFGVLLWEIFSLGASPYPGV 299
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 94/261 (36%), Gaps = 51/261 (19%)
Query: 126 YEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTI-AVKVFNLIRPGG 184
++G I + S+K N F +G G FG V D AVKV I
Sbjct: 16 FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---- 71
Query: 185 SKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGA--RFKAVVYKFMPNG-SLEEWLRGKD 241
K + K +I + + V Y G + + F P G SL E +
Sbjct: 72 -KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRN- 129
Query: 242 DTNWRPLNFN-FLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG--- 297
N+N F I+ I++ AL YL + + H +LKP N+LLDD
Sbjct: 130 -------NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSL 179
Query: 298 ----------------------HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGC 335
+ DFG A F K + I + Y PE L
Sbjct: 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF-----KSDYHGSIINTRQYRAPEVILNL 234
Query: 336 EASTYGDVYSFGILLLEMFTG 356
D++SFG +L E++TG
Sbjct: 235 GWDVSSDMWSFGCVLAELYTG 255
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 259 DIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFI 318
D+ + L +LH + H +LKP N+L+ + DFG+AR Q
Sbjct: 124 DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALT 177
Query: 319 CIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+ + Y PE L +T D++S G + EMF
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 54/239 (22%)
Query: 144 TNGFSSANLIGAGNFGSVY-NGTLFDGTTIAVKVF---NLIRPGGSKSFKSECKAAINIK 199
++ + +G+G +G V G A+K+ ++ S + E +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F + R +V + G L F+ +I ++
Sbjct: 63 HPNIMKLYEFF-----EDKRNYYLVMEVYRGGEL----------------FDEIILRQKF 101
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLD----DEMIGHVGDFGMARFL 308
+D A ++ YLH + I H +LKP N+LL+ D +I V DFG++
Sbjct: 102 SEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIV-DFGLSAHF 157
Query: 309 PAIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
K + G+ YI PE YD C DV+S G++L + G P G
Sbjct: 158 EVGGKMKERL---GTAYYIAPEVLRKKYDEKC------DVWSCGVILYILLCGYPPFGG 207
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H +L N+LL ++ + + DFG+AR + R + ++ PE +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 341 GDVYSFGILLLEMFT-GIRPSDGI 363
DV+SFG+LL E+F+ G P G+
Sbjct: 283 SDVWSFGVLLWEIFSLGASPYPGV 306
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 13/100 (13%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRF 317
IA+ + AL +LH + H ++KPSNVL++ +G V DFG++ +L +D +
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKMCDFGISGYL--VDDVAKD 167
Query: 318 ICIKGSTGYIPPEY---DLGCEA-STYGDVYSFGILLLEM 353
I G Y+ PE +L + S D++S GI ++E+
Sbjct: 168 ID-AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---------------DDEMIGH----VG 300
+A + ALR+LH + + H +LKP N+L +++ + + V
Sbjct: 137 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
DFG A F I + Y PPE L + DV+S G +L E + G
Sbjct: 194 DFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---------------DDEMIGH----VG 300
+A + ALR+LH + + H +LKP N+L +++ + + V
Sbjct: 160 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
DFG A F I + Y PPE L + DV+S G +L E + G
Sbjct: 217 DFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 151 NLIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVR 205
++G G FG VY G T G I V V + + F SE N+ H +IV+
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ G+ + + ++ + P G L +L + N L L+ L I +A
Sbjct: 90 LI----GIIEEEPTW--IIMELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMA 139
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
L ++C H ++ N+L+ +GDFG++R++ D + +
Sbjct: 140 -YLESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 191
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++ PE +T DV+ F + + E+ +
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 94/239 (39%), Gaps = 54/239 (22%)
Query: 144 TNGFSSANLIGAGNFGSVY-NGTLFDGTTIAVKVF---NLIRPGGSKSFKSECKAAINIK 199
++ + +G+G +G V G A+K+ ++ S + E +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 200 HRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLD 259
H NI++++ F + R +V + G L F+ +I ++
Sbjct: 80 HPNIMKLYEFF-----EDKRNYYLVMEVYRGGEL----------------FDEIILRQKF 118
Query: 260 IAIDVACALR-------YLHCDCQPPIAHCNLKPSNVLLD----DEMIGHVGDFGMARFL 308
+D A ++ YLH + I H +LKP N+LL+ D +I V DFG++
Sbjct: 119 SEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIV-DFGLSAHF 174
Query: 309 PAIDKQNRFICIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRPSDG 362
K + G+ YI PE YD C DV+S G++L + G P G
Sbjct: 175 EVGGKMKERL---GTAYYIAPEVLRKKYDEKC------DVWSCGVILYILLCGYPPFGG 224
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 151 NLIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVR 205
++G G FG VY G T G I V V + + F SE N+ H +IV+
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ G+ + + ++ + P G L +L + N L L+ L I +A
Sbjct: 78 LI----GIIEEEPTW--IIMELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMA 127
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
L ++C H ++ N+L+ +GDFG++R++ D + +
Sbjct: 128 -YLESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 179
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++ PE +T DV+ F + + E+ +
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 152 LIGAGNFGSVYN-GTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFT 208
++G G+FG V AVKV N + + + E + + H NI+++F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK-------LDIA 261
+ F +V + G L F+ +IK+K I
Sbjct: 89 ILE----DSSSF-YIVGELYTGGEL----------------FDEIIKRKRFSEHDAARII 127
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFI 318
V + Y+H + I H +LKP N+LL+ + + DFG++ K I
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 319 CIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ YI PE YD C DV+S G++L + +G P
Sbjct: 185 ---GTAYYIAPEVLRGTYDEKC------DVWSAGVILYILLSGTPP 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 151 NLIGAGNFGSVYNG--TLFDGTTIAVKVFNLIRP---GGSKSFKSECKAAINIKHRNIVR 205
++G G FG VY G T G I V V + + F SE N+ H +IV+
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 206 VFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDVA 265
+ G+ + + ++ + P G L +L + N L L+ L I +A
Sbjct: 74 LI----GIIEEEPTW--IIMELYPYGELGHYL----ERNKNSLKVLTLVLYSLQICKAMA 123
Query: 266 CALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTG 325
L ++C H ++ N+L+ +GDFG++R++ D + +
Sbjct: 124 -YLESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIK 175
Query: 326 YIPPEYDLGCEASTYGDVYSFGILLLEMFT 355
++ PE +T DV+ F + + E+ +
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 27/116 (23%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---------------DDEMIGH----VG 300
+A + ALR+LH + + H +LKP N+L +++ + + V
Sbjct: 128 MAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 301 DFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
DFG A F I + Y PPE L + DV+S G +L E + G
Sbjct: 185 DFGSATF-----DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 88/226 (38%), Gaps = 51/226 (22%)
Query: 152 LIGAGNFGSVYN-GTLFDGTTIAVKVFNLI--RPGGSKSFKSECKAAINIKHRNIVRVFT 208
++G G+FG V AVKV N + + + E + + H NI+++F
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 209 AFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK-------LDIA 261
+ F +V + G L F+ +IK+K I
Sbjct: 89 ILE----DSSSF-YIVGELYTGGEL----------------FDEIIKRKRFSEHDAARII 127
Query: 262 IDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFGMARFLPAIDKQNRFI 318
V + Y+H + I H +LKP N+LL+ + + DFG++ K I
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184
Query: 319 CIKGSTGYIPPE-----YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
G+ YI PE YD C DV+S G++L + +G P
Sbjct: 185 ---GTAYYIAPEVLRGTYDEKC------DVWSAGVILYILLSGTPP 221
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 197 NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKK 256
+ H +IV++F D G +V +++ SL+ R + +
Sbjct: 135 EVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK-----------RSKGQKLPVAE 183
Query: 257 KLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNR 316
+ +++ AL YLH + + +LKP N++L +E + + D G A+ + N
Sbjct: 184 AIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLI-DLG------AVSRINS 233
Query: 317 FICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
F + G+ G+ PE + + D+Y+ G L +
Sbjct: 234 FGYLYGTPGFQAPEI-VRTGPTVATDIYTVGRTLAAL 269
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMA-RFLPAIDKQNRFICIKGSTGYIPPEYDLGCEA 337
I H ++KPSN+LLD + DFG++ + + +I K G Y+ PE + A
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRD----AGCRPYMAPER-IDPSA 201
Query: 338 STYG-----DVYSFGILLLEMFTGIRP 359
S G DV+S GI L E+ TG P
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVK-VFNLIRPGGSKSFKSE---CKA 194
+L+ + ++ I +G++G+V G +G +A+K VFN + G + + S+ CK
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 195 AI-------NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP 247
+ + H NI+ + F + + A K + + L + + + P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFE-EPAMHKLYLVTELMRTDLAQVIHDQRIV-ISP 133
Query: 248 LNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307
+ + + L L LH + + H +L P N+LL D + DF +AR
Sbjct: 134 QHIQYFMYHIL-------LGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 308 LPAIDKQNRFICIKGSTGYIPPEYDLGCEAST-YGDVYSFGILLLEMF 354
A + ++ + Y PE + + T D++S G ++ EMF
Sbjct: 184 DTADANKTHYVTHR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 27/228 (11%)
Query: 139 DLYNATNGFSSANLIGAGNFGSVYNGTLFDGTTIAVK-VFNLIRPGGSKSFKSE---CKA 194
+L+ + ++ I +G++G+V G +G +A+K VFN + G + + S+ CK
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 195 AI-------NIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRP 247
+ + H NI+ + F + + A K + + L + + + P
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFE-EPAMHKLYLVTELMRTDLAQVIHDQRIV-ISP 133
Query: 248 LNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF 307
+ + + L L LH + + H +L P N+LL D + DF +AR
Sbjct: 134 QHIQYFMYHIL-------LGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 308 LPAIDKQNRFICIKGSTGYIPPEYDLGCEAST-YGDVYSFGILLLEMF 354
A + ++ + Y PE + + T D++S G ++ EMF
Sbjct: 184 DTADANKTHYVTHR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 270 YLHCDCQPPIAHCNLKPSNVLLDDEM-IGHVG--DFGMARFLPAIDKQNRFICIKGSTGY 326
YLH Q I H +LKP N+LL +G + DFGM+R I I G+ Y
Sbjct: 146 YLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEY 199
Query: 327 IPPE---YDLGCEASTYGDVYSFGILLLEMFTGIRP 359
+ PE YD +T D+++ GI+ + T P
Sbjct: 200 LAPEILNYD---PITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GT 172
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
Y+PPE +S DV+S G +L M G P I
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 92/240 (38%), Gaps = 48/240 (20%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRN-- 202
+S IG+G V+ A+K NL S+++E ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGS--LEEWLRGKDDTN-WRPLNFNFLIKKKLD 259
I+R++ DY+ +Y M G+ L WL+ K + W ++
Sbjct: 90 IIRLY------DYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY--------- 132
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQN 315
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K +
Sbjct: 133 ----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDS 187
Query: 316 RFICIKGSTGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
+ G+ Y+PPE +S DV+S G +L M G P I
Sbjct: 188 QV----GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 146 GFSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINI-KHRNIV 204
F +++G G G++ +FD +AVK I P E + +H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVK---RILPECFSFADREVQLLRESDEHPNVI 81
Query: 205 RVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAIDV 264
R F +Q + +L+E++ KD F L + + +
Sbjct: 82 RYFCTEKDRQFQYIAIELCA------ATLQEYVEQKD--------FAHLGLEPITLLQQT 127
Query: 265 ACALRYLHCDCQPPIAHCNLKPSNVLLD-----DEMIGHVGDFGMARFLPAIDKQ--NRF 317
L +LH I H +LKP N+L+ ++ + DFG+ + L A+ + +R
Sbjct: 128 TSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-AVGRHSFSRR 183
Query: 318 ICIKGSTGYIPPE 330
+ G+ G+I PE
Sbjct: 184 SGVPGTEGWIAPE 196
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 48/240 (20%)
Query: 147 FSSANLIGAGNFGSVYNGTLFDGTTIAVKVFNLIRPGGSK--SFKSECKAAINIKHRN-- 202
+S IG+G V+ A+K NL S+++E ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 203 IVRVFTAFSGVDYQGARFKAVVYKFMPNGS--LEEWLRGKDDTN-WRPLNFNFLIKKKLD 259
I+R++ DY+ +Y M G+ L WL+ K + W ++
Sbjct: 90 IIRLY------DYEIT--DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSY--------- 132
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFIC 319
L +H Q I H +LKP+N L+ D M+ + DFG+A + + +
Sbjct: 133 ----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQM----QPDXXXV 183
Query: 320 IK----GSTGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
+K G+ Y+PPE +S DV+S G +L M G P I
Sbjct: 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GT 219
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRP 359
Y+PPE +S DV+S G +L M G P
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 260 IAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVG--DFGMARFLPAIDKQNRF 317
IA+ + AL +LH + H ++KPSNVL++ +G V DFG++ +L +D +
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN--ALGQVKXCDFGISGYL--VDDVAKD 194
Query: 318 ICIKGSTGYIPPEY---DLGCEA-STYGDVYSFGILLLEM 353
I G Y PE +L + S D++S GI +E+
Sbjct: 195 ID-AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GA 219
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRP 359
Y+PPE +S DV+S G +L M G P
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 266
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 33/221 (14%)
Query: 152 LIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIK----------H 200
L+G G FG+V+ G L D +A+KV R G + + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 201 RNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDI 260
++R+ F + F V+ + +P L +++ K P F
Sbjct: 98 PGVIRLLDWFETQE----GFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF-------- 145
Query: 261 AIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC 319
V A+++ H + H ++K N+L+D + DFG L +
Sbjct: 146 -GQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTD 197
Query: 320 IKGSTGYIPPEYDLGCE-ASTYGDVYSFGILLLEMFTGIRP 359
G+ Y PPE+ + + V+S GILL +M G P
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GT 175
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
Y+PPE +S DV+S G +L M G P I
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GT 171
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
Y+PPE +S DV+S G +L M G P I
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
D AL +LH + H ++KP+N+ L +GDFG+ L + +G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEG 218
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEM 353
Y+ PE G T DV+S G+ +LE+
Sbjct: 219 DPRYMAPELLQGS-YGTAADVFSLGLTILEV 248
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 20/112 (17%)
Query: 268 LRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLP----AIDKQNRFICIKGS 323
L +H Q I H +LKP+N L+ D M+ + DFG+A + ++ K ++ G+
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV----GT 219
Query: 324 TGYIPPEYDLGCEAS-----------TYGDVYSFGILLLEMFTGIRPSDGIF 364
Y+PPE +S DV+S G +L M G P I
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 69/249 (27%)
Query: 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNI 203
N + IG+G+FG +Y GT + G +A+K+ EC + KH +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--------------EC---VKTKHPQL 49
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNG---SLEEWLRGKDDTNWRPLN---------FN 251
++ +YK M G W + D N + FN
Sbjct: 50 ---------------HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFN 94
Query: 252 FL-----IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFG 303
F +K L +A + + Y+H H ++KP N L+ G ++ DFG
Sbjct: 95 FCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151
Query: 304 MAR---------FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+A+ +P + +N + G+ Y LG E S D+ S G +L+
Sbjct: 152 LAKKYRDARTHQHIPYRENKN----LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 207
Query: 355 TGIRPSDGI 363
G P G+
Sbjct: 208 LGSLPWQGL 216
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 69/249 (27%)
Query: 145 NGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNI 203
N + IG+G+FG +Y GT + G +A+K+ EC + KH +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--------------EC---VKTKHPQL 51
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNG---SLEEWLRGKDDTNWRPLN---------FN 251
++ +YK M G W + D N + FN
Sbjct: 52 ---------------HIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFN 96
Query: 252 FL-----IKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG---HVGDFG 303
F +K L +A + + Y+H H ++KP N L+ G ++ DFG
Sbjct: 97 FCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153
Query: 304 MAR---------FLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMF 354
+A+ +P + +N + G+ Y LG E S D+ S G +L+
Sbjct: 154 LAKKYRDARTHQHIPYRENKN----LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN 209
Query: 355 TGIRPSDGI 363
G P G+
Sbjct: 210 LGSLPWQGL 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH + + + +LK N++LD + + DFG+ + I G
Sbjct: 259 EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCG 314
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE E + YG D + G+++ EM G P
Sbjct: 315 TPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 153 IGAGNFGSV-YNGTLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNIVRVFTAFS 211
+G G F V L DG A+K + + E H NI+R+ A+
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL-VAYC 95
Query: 212 GVDYQGARFKA-VVYKFMPNGSL-EEWLRGKDDTNWRPLNFNFLIKKK-LDIAIDVACAL 268
+ +GA+ +A ++ F G+L E R KD N FL + + L + + + L
Sbjct: 96 -LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN-------FLTEDQILWLLLGICRGL 147
Query: 269 RYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFG-MARFLPAIDKQNRFICIKG----- 322
+H AH +LKP+N+LL DE + D G M + ++ + + ++
Sbjct: 148 EAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 323 -STGYIPPEY---DLGCEASTYGDVYSFGILLLEMFTGIRPSDGIF 364
+ Y PE C DV+S G +L M G P D +F
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH + + + +LK N++LD + + DFG+ + I G
Sbjct: 256 EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCG 311
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE E + YG D + G+++ EM G P
Sbjct: 312 TPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH + + + +LK N++LD + + DFG+ + + C G
Sbjct: 116 EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--G 171
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE E + YG D + G+++ EM G P
Sbjct: 172 TPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 43/245 (17%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSEC 192
+P+FK + +G G+F +V+ + + T +A+K+ G K +
Sbjct: 8 HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR-----GDKVYTEAA 62
Query: 193 KAAINIKHR---------------NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWL 237
+ I + R +I+++ F +++G VV F G L
Sbjct: 63 EDEIKLLQRVNDADNTKEDSMGANHILKLLDHF---NHKGPNGVHVVMVFEVLGENLLAL 119
Query: 238 RGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD----- 292
K + PL + I K+L + +D Y+H C I H ++KP NVL++
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLD------YMHRRCG--IIHTDIKPENVLMEIVDSP 171
Query: 293 DEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLL 351
+ +I + D G A + + + Y PE LG D++S L+
Sbjct: 172 ENLIQIKIADLGNACWY-----DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF 226
Query: 352 EMFTG 356
E+ TG
Sbjct: 227 ELITG 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH + + + +LK N++LD + + DFG+ + + C G
Sbjct: 117 EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--G 172
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE E + YG D + G+++ EM G P
Sbjct: 173 TPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKG 322
++ AL YLH + + + +LK N++LD + + DFG+ + + C G
Sbjct: 118 EIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC--G 173
Query: 323 STGYIPPEYDLGCEASTYG---DVYSFGILLLEMFTGIRP 359
+ Y+ PE E + YG D + G+++ EM G P
Sbjct: 174 TPEYLAPEV---LEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 96/245 (39%), Gaps = 43/245 (17%)
Query: 134 NPSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSEC 192
+P+FK + +G G+F +V+ + + T +A+K+ G K +
Sbjct: 8 HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR-----GDKVYTEAA 62
Query: 193 KAAINIKHR---------------NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWL 237
+ I + R +I+++ F +++G VV F G L
Sbjct: 63 EDEIKLLQRVNDADNTKEDSMGANHILKLLDHF---NHKGPNGVHVVMVFEVLGENLLAL 119
Query: 238 RGKDDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD----- 292
K + PL + I K+L + +D Y+H C I H ++KP NVL++
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLD------YMHRRCG--IIHTDIKPENVLMEIVDSP 171
Query: 293 DEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLL 351
+ +I + D G A + + + Y PE LG D++S L+
Sbjct: 172 ENLIQIKIADLGNACWY-----DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIF 226
Query: 352 EMFTG 356
E+ TG
Sbjct: 227 ELITG 231
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 281 HCNLKPSNVLLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
H ++KP N+L+ + ++ DFG+A +K + G+ Y PE A+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 341 GDVYSFGILLLEMFTGIRPSDG 362
D+Y+ +L E TG P G
Sbjct: 216 ADIYALTCVLYECLTGSPPYQG 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 27/236 (11%)
Query: 133 NNPSFKDLYNATNGFSSANLIGAGNFGSVYNGT-LFDGTTIAVKVFNLIRPGGSKSFKSE 191
P K+ + + L+G+G FGSVY+G + D +A+K R +
Sbjct: 19 QGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 78
Query: 192 CKAAINIKHRNIVRVFTAFSGV----DY--QGARFKAVVYKFMPNGSLEEWLRGKDDTNW 245
+ + + + +V + FSGV D+ + F ++ + P L +++ +
Sbjct: 79 TRVPMEVV--LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ- 135
Query: 246 RPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGM 304
L +F + V A+R+ H +C + H ++K N+L+D + + DFG
Sbjct: 136 EELARSFFWQ--------VLEAVRHCH-NCG--VLHRDIKDENILIDLNRGELKLIDFGS 184
Query: 305 ARFLPAIDKQNRFICIKGSTGYIPPEY-DLGCEASTYGDVYSFGILLLEMFTGIRP 359
L K + G+ Y PPE+ V+S GILL +M G P
Sbjct: 185 GALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC---IKG 322
L YLH I H ++K NVLL D + DFG A L + I G
Sbjct: 197 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ ++ PE LG DV+S ++L M G P F G
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC---IKG 322
L YLH I H ++K NVLL D + DFG A L + I G
Sbjct: 178 GLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ ++ PE LG DV+S ++L M G P F G
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 53/246 (21%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGG--SKSFKS--- 190
F+D+Y +++G G V L AVK+ +PG S+ F+
Sbjct: 10 FEDVYQLQE-----DVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFREVEM 63
Query: 191 --ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
+C+ HRN++ + F D RF +V++ M GS+ + + N L
Sbjct: 64 LYQCQG-----HRNVLELIEFFEEED----RF-YLVFEKMRGGSILSHIHKRRHFN--EL 111
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDE---MIGHVGDFGMA 305
+ +++ DVA AL +LH IAH +LKP N+L + + DFG+
Sbjct: 112 EASVVVQ-------DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLG 161
Query: 306 RFL-------PAIDKQNRFICIKGSTGYIPPEY--DLGCEASTYG---DVYSFGILLLEM 353
+ P + C GS Y+ PE EAS Y D++S G++L +
Sbjct: 162 SGIKLNGDCSPISTPELLTPC--GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL 219
Query: 354 FTGIRP 359
+G P
Sbjct: 220 LSGYPP 225
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 26/218 (11%)
Query: 145 NGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGGSKSFKSECKAAINIKHRNI 203
+ + +G G + V+ + + + VK+ ++P K E K N+ R
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKI---LKPVKKNKIKREIKILENL--RGG 91
Query: 204 VRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKKLDIAID 263
+ T V +R A+V++ + N ++ + D + R + L
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEIL---------- 141
Query: 264 VACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKG 322
AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 142 --KALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 323 STGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 197 FKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC---IKG 322
L YLH I H ++K NVLL D + DFG A L + I G
Sbjct: 176 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 232
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ ++ PE +G D++S ++L M G P F G
Sbjct: 233 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC---IKG 322
L YLH I H ++K NVLL D + DFG A L + I G
Sbjct: 178 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ ++ PE +G D++S ++L M G P F G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 7/104 (6%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLD-DEMIGHVGDFGMARFLPAIDKQNRFIC---IKG 322
L YLH I H ++K NVLL D + DFG A L + I G
Sbjct: 162 GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 323 STGYIPPEYDLGCEASTYGDVYSFGILLLEMFTGIRPSDGIFTG 366
+ ++ PE +G D++S ++L M G P F G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +LKP N+L++ + DFG+AR +P + + Y PP+ G +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL----WYRPPDVLFGAK 177
Query: 337 A-STYGDVYSFGILLLEMFTGIRP 359
ST D++S G + E+ RP
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARP 201
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 89/238 (37%), Gaps = 51/238 (21%)
Query: 147 FSSANLIGAGNFGSVYNGTLFD--GTTIAVKVFNLIRPGGSKSFKSECKAAINIKHR--- 201
+ + +G G FG V G +A+K+ + + +K + IN+ +
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNV-----EKYKEAARLEINVLEKINE 89
Query: 202 ----NIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIKKK 257
N F DY G + ++ + + + +L+ D N+ P + I +
Sbjct: 90 KDPDNKNLCVQMFDWFDYHG--HMCISFELLGLSTFD-FLK---DNNYLP----YPIHQV 139
Query: 258 LDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLL---------------DDEMIG----H 298
+A + A+++LH + + H +LKP N+L D+ +
Sbjct: 140 RHMAFQLCQAVKFLHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVR 196
Query: 299 VGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTYGDVYSFGILLLEMFTG 356
V DFG A F I + Y PE L S DV+S G ++ E + G
Sbjct: 197 VVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 53/246 (21%)
Query: 137 FKDLYNATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVKVFNLIRPGG--SKSFKS--- 190
F+D+Y +++G G V L AVK+ +PG S+ F+
Sbjct: 10 FEDVYQLQE-----DVLGEGAHARVQTCINLITSQEYAVKIIEK-QPGHIRSRVFREVEM 63
Query: 191 --ECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPL 248
+C+ HRN++ + F D RF +V++ M GS+ + + N L
Sbjct: 64 LYQCQG-----HRNVLELIEFFEEED----RF-YLVFEKMRGGSILSHIHKRRHFN--EL 111
Query: 249 NFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMARF- 307
+ +++ DVA AL +LH IAH +LKP N+L E V + F
Sbjct: 112 EASVVVQ-------DVASALDFLH---NKGIAHRDLKPENILC--EHPNQVSPVKICDFD 159
Query: 308 LPAIDKQN---------RFICIKGSTGYIPPEY--DLGCEASTYG---DVYSFGILLLEM 353
L + K N + GS Y+ PE EAS Y D++S G++L +
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL 219
Query: 354 FTGIRP 359
+G P
Sbjct: 220 LSGYPP 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 200 HRNIVRVFTAFS----GVDYQGARFKAVVYKFMPNGSLEEWLRGKDDTNWRPLNFNFLIK 255
H NIV+ +A S D A F ++ + G L E+L+ + PL+ + ++K
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESRG--PLSCDTVLK 140
Query: 256 KKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
I A++++H +PPI H +LK N+LL ++ + DFG A
Sbjct: 141 ----IFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D + + D+G+A F + N + + G
Sbjct: 144 ALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
PE + + Y D++S G +L M P
Sbjct: 201 ---PELLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D + + D+G+A F + N + +
Sbjct: 145 ELLKALDYCHSKG---IMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 202 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NVL+D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
I H +LKP+N LL+ + V DFG+AR
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 126 YEGKQTINNPSFKDLYNATNGFSSANLIGAGNFGSVYNG-TLFDGTTIAVK----VF-NL 179
+ K T + P + + + +LIG G++G V + +A+K VF +L
Sbjct: 34 HSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL 93
Query: 180 IRPGGSKSFKSECKAAINIKHRNIVRVFTAFSGVDYQGARFKAVVYKFMPNGSLEEWLRG 239
I K E + H ++V+V D + VV + + + ++ R
Sbjct: 94 I---DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRT 149
Query: 240 K---DDTNWRPLNFNFLIKKKLDIAIDVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMI 296
+ + + L +N L+ ++Y+H I H +LKP+N L++ +
Sbjct: 150 PVYLTELHIKTLLYNLLV------------GVKYVHSAG---ILHRDLKPANCLVNQDCS 194
Query: 297 GHVGDFGMAR 306
V DFG+AR
Sbjct: 195 VKVCDFGLAR 204
>pdb|2OHF|A Chain A, Crystal Structure Of Human Ola1 In Complex With Amppcp
Length = 396
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 290 LLDDEMIGHVGDFGMARFLPAIDKQNRFICIKGSTGYIPPEYDLGCEASTY 340
L D+EMIG P IDK + + ++G + PEYD+ C+ ++
Sbjct: 154 LKDEEMIG-----------PIIDKLEK-VAVRGGDKKLKPEYDIMCKVKSW 192
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMARF--LPAIDKQNRFICIKGSTGYIPPEYDLGCE 336
+ H +LKP N+L++ + +FG+AR +P + + Y PP+ G +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL----WYRPPDVLFGAK 177
Query: 337 A-STYGDVYSFGILLLEMFTGIRP 359
ST D++S G + E+ RP
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 279 IAHCNLKPSNVLLDDEMIGHVGDFGMAR 306
I H +LKP+N LL+ + + DFG+AR
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 138 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 195 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 137 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 194 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 138 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 195 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 144 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 201 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 236
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIK 321
++ AL Y H I H ++KP NV++D E + D+G+A F + N + +
Sbjct: 139 EILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 322 GSTGYIPPEYDLGCEASTYG-DVYSFGILLLEMFTGIRP 359
G PE + + Y D++S G +L M P
Sbjct: 196 YFKG---PELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 138 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 195 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 158 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 215 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 240
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 139 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 196 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 221
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 138 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 195 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 220
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 267 ALRYLHCDCQPPIAHCNLKPSNVLLDDEMIG-HVGDFGMARFLPAIDKQNRFICIKGSTG 325
AL Y H I H ++KP NV++D E+ + D+G+A F + N + + G
Sbjct: 137 ALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 326 YIPPEYDLGCEASTYG-DVYSFGILLLEMFTGI 357
PE + + Y D++S G MF G+
Sbjct: 194 ---PELLVDLQDYDYSLDMWSLGC----MFAGM 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 263 DVACALRYLHCDCQPPIAHCNLKPSNVLLDDEMIGHVGDFGMA 305
D+ + YLH I H ++KPSN+L+ ++ + DFG++
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,950,773
Number of Sequences: 62578
Number of extensions: 469066
Number of successful extensions: 3217
Number of sequences better than 100.0: 998
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 645
Number of HSP's that attempted gapping in prelim test: 1685
Number of HSP's gapped (non-prelim): 1438
length of query: 367
length of database: 14,973,337
effective HSP length: 100
effective length of query: 267
effective length of database: 8,715,537
effective search space: 2327048379
effective search space used: 2327048379
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)