Query 017715
Match_columns 367
No_of_seqs 148 out of 259
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 03:47:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 8E-106 3E-110 814.2 1.6 300 53-363 27-389 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 3E-94 1E-98 713.2 9.4 277 70-363 8-311 (388)
3 2wfu_A Probable insulin-like p 29.3 12 0.00041 23.6 0.1 16 72-87 1-19 (26)
4 1pid_A Despentapeptide insulin 28.2 12 0.00041 23.6 -0.0 16 72-87 1-19 (26)
5 2rng_A BIG defensin; alpha-hel 27.2 8.4 0.00029 30.1 -1.1 55 19-90 14-68 (79)
6 2wfv_A Probable insulin-like p 23.6 15 0.00052 23.0 -0.2 16 71-86 3-21 (26)
7 2k72_A Matrix metalloproteinas 19.9 12 0.0004 24.7 -1.4 18 110-127 4-21 (37)
8 3s8f_B Cytochrome C oxidase su 18.6 75 0.0026 27.8 3.1 19 22-40 17-35 (168)
9 1igl_A Insulin-like growth fac 17.1 46 0.0016 25.1 1.2 18 70-87 39-59 (67)
10 2i8b_A Minor nucleoprotein VP3 16.1 43 0.0015 28.7 0.9 40 273-315 13-52 (152)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=8.3e-106 Score=814.22 Aligned_cols=300 Identities=33% Similarity=0.612 Sum_probs=230.8
Q ss_pred CCCCcccccCCCCCCccccccccCcccchHhHHhhhhhhhhHHHHhhhcCCcccEEeccCCCCCCCCCCCCCCCCCCCcc
Q 017715 53 NNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSV 132 (367)
Q Consensus 53 ~~~~~c~c~~~~~~~~~~~G~v~Dc~c~~etId~~N~~~l~p~L~~Lv~t~fFRyfKVNL~~~CPFW~dd~~C~~~~C~V 132 (367)
+..+.|||+ ++|+|+||||+|+|||++|+++|+|+|++|+++||||||||||+++||||+++++|++++|+|
T Consensus 27 ~~~~~c~c~--------~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V 98 (465)
T 3ahq_A 27 TAAQRCFCQ--------VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAV 98 (465)
T ss_dssp ----CEEEE--------CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC------------
T ss_pred CCCCCcccC--------CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCee
Confidence 557789999 999999999999999999997799999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCC----chhhccCCCCcccccccc---hhhhcCccccCCC---CCCCCCCCCCCceEeeC
Q 017715 133 CECPENEFPEPFKKPFHILPSD----DLMCQEGKPEATVDRTLD---KRAFRGWIETDNP---WTNDDETDNGEMTYVNL 202 (367)
Q Consensus 133 ~~c~e~eiPe~wr~~~~~~~~~----~~~c~~~~~~~~vd~tl~---~~~~~~w~~~D~~---~~~~De~~~~~~~YVDL 202 (367)
++|+|+|||++||++..+++.. ...|+++..++.||++++ ..+|.+|.++|++ +|..|++++++++||||
T Consensus 99 ~~c~e~eiP~~wr~~~~~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdL 178 (465)
T 3ahq_A 99 KPAQSDEVPDGIKSASYKYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDL 178 (465)
T ss_dssp ------------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEG
T ss_pred ecCCcccCChhhcccccccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEec
Confidence 9999999999999865443321 125666666788999887 3578999988753 44444345689999999
Q ss_pred CCCCCCCCCCCCCChhhhHHHHHhhcCCCCCC------------------------CCCC------------cCCCCCCC
Q 017715 203 LLNPERYTGYTGPSARRIWDAVYTENCPKWMA------------------------IVPA------------NPQTRPNP 246 (367)
Q Consensus 203 l~NPERyTGY~G~~A~rIW~aIY~ENCF~~~~------------------------~~~C------------LHaSIsiH 246 (367)
++||||||||+|++|+|||++||+||||++.+ +++| ||||||||
T Consensus 179 l~NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~H 258 (465)
T 3ahq_A 179 LLNPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVH 258 (465)
T ss_dssp GGSCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998542 5789 99999999
Q ss_pred CCCC----C---CCCCCCChHHHHHHH------hhhhhhhhhHHHHHHHHHHHHHHhhhhhhhccc--CCCCccccHHHH
Q 017715 247 PAKT----R---PLRWGKNPELMYDRV------LRYQDRVRNLYFTFLFVLRAVTKATDYLEQAEY--DTGNHEDDLKTV 311 (367)
Q Consensus 247 l~~~----~---~~~W~pNl~~F~~Rv------~~~PeRL~NLYF~YllvLRAl~Ka~p~L~~~~f--~TG~~~eD~~t~ 311 (367)
||++ . +|+|+||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +|||..+|++|+
T Consensus 259 l~~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk 338 (465)
T 3ahq_A 259 LSARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENK 338 (465)
T ss_dssp HHHTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHH
T ss_pred HHHHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHH
Confidence 9998 3 899999999999997 579999999999999999999999999996666 999999999999
Q ss_pred HHHHHHhcCccccccCCCCCCccccCCCC--CCCchHHHHHHhhhhhhhccCCc
Q 017715 312 SLMKQLLYNPKLQAACPLPFDEAKLWQGQ--SGPELKQQIQEQFRNIRFRSEPE 363 (367)
Q Consensus 312 ~lv~~Ll~~~~l~~scp~~FDE~~lF~~~--~a~~LKeeFr~~FrNISrIMD~~ 363 (367)
++|.+||+.. .+||.+|||+.||+|. .+.+||+|||+|||||||||||-
T Consensus 339 ~~l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCV 389 (465)
T 3ahq_A 339 MLLLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCV 389 (465)
T ss_dssp HHHHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCC
Confidence 9999999864 3799999999999984 67899999999999999999995
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=3e-94 Score=713.18 Aligned_cols=277 Identities=24% Similarity=0.458 Sum_probs=225.8
Q ss_pred ccccccCcccchHhHHhhhhhhhhHHHHhhhcCCcccEEeccCCCCCCCCCC-CCCCCCCCCccccCCC-CCCCCCCCCC
Q 017715 70 YTGMVEDCCCDYETVDSVNGEVLHPLLQQLVTTPFFRYFKAKLWCDCPFWPD-DGMCRLRDCSVCECPE-NEFPEPFKKP 147 (367)
Q Consensus 70 ~~G~v~Dc~c~~etId~~N~~~l~p~L~~Lv~t~fFRyfKVNL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiPe~wr~~ 147 (367)
-+|.|. |++|+|||++|.+ |+|+|++||+|||||||||||+++||||++ +++|++++|+|++|++ ++||++||++
T Consensus 8 ~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~~ 84 (388)
T 3m31_A 8 SSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPE 84 (388)
T ss_dssp ---------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSHH
T ss_pred cCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhccc
Confidence 467776 5699999999987 899999999999999999999999999998 7999999999999997 9999999975
Q ss_pred C-CCCCCC--------chhhccCCCCcccccccchhhhcCccccCCCCCCCCCCCCCCceEeeCCCCCCCCCCCCCCChh
Q 017715 148 F-HILPSD--------DLMCQEGKPEATVDRTLDKRAFRGWIETDNPWTNDDETDNGEMTYVNLLLNPERYTGYTGPSAR 218 (367)
Q Consensus 148 ~-~~~~~~--------~~~c~~~~~~~~vd~tl~~~~~~~w~~~D~~~~~~De~~~~~~~YVDLl~NPERyTGY~G~~A~ 218 (367)
. +++... +..|.....+...++.+ .+...++.||+.||+++++++||||++||||||||+|++|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a~ 158 (388)
T 3m31_A 85 ILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAG 158 (388)
T ss_dssp HHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHH
T ss_pred cccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCchH
Confidence 4 333221 11222110011111111 01123455776665577899999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCCCCC------------cCCCCCCCCCCC----CCCCCCCChHHHHHHHhhhhhhhhhHHHHHHH
Q 017715 219 RIWDAVYTENCPKWMAIVPA------------NPQTRPNPPAKT----RPLRWGKNPELMYDRVLRYQDRVRNLYFTFLF 282 (367)
Q Consensus 219 rIW~aIY~ENCF~~~~~~~C------------LHaSIsiHl~~~----~~~~W~pNl~~F~~Rv~~~PeRL~NLYF~Yll 282 (367)
+||++||+||||++..+++| |||||+||||++ .+|+|+||+++|++|||+|||||+||||+|+|
T Consensus 159 ~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~l 238 (388)
T 3m31_A 159 QIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYLNTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYAV 238 (388)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEECTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHhCccCCCcCCCHHHHHHHHccchhHHHHHHHHHHH
Confidence 99999999999999888999 999999999999 67999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhcccCCCCccccHHHHHHHHHHhcCccccccCCCCCCccccCCCCCCCchHHHHHHhhhhhhhccCC
Q 017715 283 VLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMKQLLYNPKLQAACPLPFDEAKLWQGQSGPELKQQIQEQFRNIRFRSEP 362 (367)
Q Consensus 283 vLRAl~Ka~p~L~~~~f~TG~~~eD~~t~~lv~~Ll~~~~l~~scp~~FDE~~lF~~~~a~~LKeeFr~~FrNISrIMD~ 362 (367)
|||||+||+|||.+++|+| .+|.+|+++|.+|++. .+|.+|||+.||+++.+..||+|||+|||||||||||
T Consensus 239 ~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMDC 310 (388)
T 3m31_A 239 VAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMDC 310 (388)
T ss_dssp HHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999998 4688899999999974 3578999999999999999999999999999999999
Q ss_pred c
Q 017715 363 E 363 (367)
Q Consensus 363 ~ 363 (367)
-
T Consensus 311 V 311 (388)
T 3m31_A 311 V 311 (388)
T ss_dssp C
T ss_pred c
Confidence 4
No 3
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=29.33 E-value=12 Score=23.55 Aligned_cols=16 Identities=38% Similarity=1.230 Sum_probs=11.7
Q ss_pred ccccCcc---cchHhHHhh
Q 017715 72 GMVEDCC---CDYETVDSV 87 (367)
Q Consensus 72 G~v~Dc~---c~~etId~~ 87 (367)
|+||.|| |++..+.+.
T Consensus 1 GIVdeCC~~~Cs~~~L~~Y 19 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRAY 19 (26)
T ss_dssp CHHHHHTSSCBCHHHHHHT
T ss_pred CcchhhcCCcCCHHHHHHh
Confidence 7889988 777766543
No 4
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=28.21 E-value=12 Score=23.55 Aligned_cols=16 Identities=38% Similarity=1.115 Sum_probs=11.6
Q ss_pred ccccCcc---cchHhHHhh
Q 017715 72 GMVEDCC---CDYETVDSV 87 (367)
Q Consensus 72 G~v~Dc~---c~~etId~~ 87 (367)
|+||.|| |++..+++.
T Consensus 1 GIVdeCC~~~Cs~~~L~~Y 19 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLENY 19 (26)
T ss_dssp CHHHHHTTSCCCHHHHHTT
T ss_pred CcchhhCCCcCCHHHHHHH
Confidence 7889988 777666543
No 5
>2rng_A BIG defensin; alpha-helices & beta-sheets, three disulfide bridges, antibiotic, antimicrobial, fungicide, secreted; NMR {Tachypleus tridentatus} PDB: 2rq2_A
Probab=27.17 E-value=8.4 Score=30.07 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=33.9
Q ss_pred cCCcchHHHHHHHHHHHHhhhhhcccCCccccccCCCCcccccCCCCCCccccccccCcccchHhHHhhhhh
Q 017715 19 GLGRGLWSVWAVIVVLFATAAVTTRTGSKIALFANNQTSCHCSSSSQDSVKYTGMVEDCCCDYETVDSVNGE 90 (367)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~c~~~~~~~~~~~G~v~Dc~c~~etId~~N~~ 90 (367)
++..|.|+|++.-+..|+.+.+...+ +++.+|-= -.|--..-|++.|.+|..|+.
T Consensus 14 sp~V~~~Lv~~yGaaAVt~~~i~~~~--------~DshsCan---------nrGWCR~~Cfs~Ey~D~~~s~ 68 (79)
T 2rng_A 14 GPSVWAYLVALVGAAAVTAANIRRAS--------SDNHSCAG---------NRGWCRSKCFRHEYVDTYYSA 68 (79)
T ss_dssp CHHHHHHHHHHSCHHHHHHTTEEECS--------SSCCEETT---------TTEEEESSCCTTCEECTTTHH
T ss_pred CHHHHHHHHHHHhHHHHHHhheeecc--------CCcccccc---------cCCcccchhcceeeecccCCc
Confidence 34568888876666666655555442 34444422 355555667888988888875
No 6
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=23.60 E-value=15 Score=23.04 Aligned_cols=16 Identities=38% Similarity=1.248 Sum_probs=12.0
Q ss_pred cccccCcc---cchHhHHh
Q 017715 71 TGMVEDCC---CDYETVDS 86 (367)
Q Consensus 71 ~G~v~Dc~---c~~etId~ 86 (367)
.|+||.|| |++..+.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 49999998 77766654
No 7
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=19.93 E-value=12 Score=24.66 Aligned_cols=18 Identities=22% Similarity=0.672 Sum_probs=15.0
Q ss_pred ccCCCCCCCCCCCCCCCC
Q 017715 110 AKLWCDCPFWPDDGMCRL 127 (367)
Q Consensus 110 VNL~~~CPFW~dd~~C~~ 127 (367)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466789999999999874
No 8
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=18.60 E-value=75 Score=27.81 Aligned_cols=19 Identities=26% Similarity=0.104 Sum_probs=14.0
Q ss_pred cchHHHHHHHHHHHHhhhh
Q 017715 22 RGLWSVWAVIVVLFATAAV 40 (367)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~ 40 (367)
+|+.+.+++|++++++.+.
T Consensus 17 ~w~~~~~~~~~~f~~~~~~ 35 (168)
T 3s8f_B 17 GWLAFSLAMLFVFIALIAY 35 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4888888888888777433
No 9
>1igl_A Insulin-like growth factor II; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 2l29_B 2v5p_C* 3e4z_C 3kr3_D
Probab=17.11 E-value=46 Score=25.06 Aligned_cols=18 Identities=39% Similarity=1.101 Sum_probs=14.4
Q ss_pred ccccccCcc---cchHhHHhh
Q 017715 70 YTGMVEDCC---CDYETVDSV 87 (367)
Q Consensus 70 ~~G~v~Dc~---c~~etId~~ 87 (367)
-.|+||.|| |++..+.+.
T Consensus 39 ~rGIVdECC~~~Ct~~~L~~Y 59 (67)
T 1igl_A 39 SRGIVEECCFRSCDLALLETY 59 (67)
T ss_dssp CCCTTCCCCCSCCCSHHHHHH
T ss_pred cCCcHHHhcCCCCCHHHHHHH
Confidence 479999997 888877654
No 10
>2i8b_A Minor nucleoprotein VP30; VP30 ebola virus protein, transcription, RNA binding, viral; HET: MSE; 2.00A {Zaire ebolavirus}
Probab=16.07 E-value=43 Score=28.68 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhhhcccCCCCccccHHHHHHHH
Q 017715 273 VRNLYFTFLFVLRAVTKATDYLEQAEYDTGNHEDDLKTVSLMK 315 (367)
Q Consensus 273 L~NLYF~YllvLRAl~Ka~p~L~~~~f~TG~~~eD~~t~~lv~ 315 (367)
-+||||-=.+.|.-|.+.+.|+.+.+... .+|.+.|+++.
T Consensus 13 ~~~~~~~~~lTL~~L~~~ae~w~~~di~~---idds~LRAlLt 52 (152)
T 2i8b_A 13 TENLYFQGAITLLTLIKTAEHWARQDIRT---IEDSKLRALLT 52 (152)
T ss_dssp -------CCEEHHHHHHHHHHHHTSCCTT---CCHHHHHHHHH
T ss_pred ccccccccchhHHHHHHHHHHHHHhhhcc---ccHHHHHHHHH
Confidence 37999999999999999999998766554 46777776653
Done!