Query 017718
Match_columns 367
No_of_seqs 273 out of 2052
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:49:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017718.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017718hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 6.2E-81 2.1E-85 606.4 34.4 343 4-353 2-348 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 1.3E-73 4.5E-78 565.8 36.7 353 3-355 26-385 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 7.7E-73 2.6E-77 556.6 35.8 349 2-356 11-363 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 7.6E-71 2.6E-75 543.5 40.4 364 3-366 3-369 (370)
5 1kbi_A Cytochrome B2, L-LCR; f 100.0 4E-69 1.4E-73 549.7 37.4 351 2-358 120-484 (511)
6 1p4c_A L(+)-mandelate dehydrog 100.0 5.6E-68 1.9E-72 524.4 38.5 352 3-357 4-358 (380)
7 3sr7_A Isopentenyl-diphosphate 100.0 7.1E-44 2.4E-48 348.8 27.9 270 41-355 54-356 (365)
8 1vcf_A Isopentenyl-diphosphate 100.0 2.7E-43 9.2E-48 342.4 22.3 278 22-351 7-329 (332)
9 1p0k_A Isopentenyl-diphosphate 100.0 1.7E-40 5.7E-45 324.8 26.8 271 39-354 21-328 (349)
10 3vkj_A Isopentenyl-diphosphate 100.0 2.7E-40 9.3E-45 324.4 26.8 270 41-355 27-344 (368)
11 2qr6_A IMP dehydrogenase/GMP r 100.0 7.9E-42 2.7E-46 339.2 9.1 311 15-354 13-392 (393)
12 1ypf_A GMP reductase; GUAC, pu 100.0 8.5E-36 2.9E-40 290.1 22.9 262 35-355 8-325 (336)
13 3r2g_A Inosine 5'-monophosphat 100.0 7.8E-34 2.7E-38 276.8 21.2 253 41-350 8-317 (361)
14 2c6q_A GMP reductase 2; TIM ba 100.0 7.6E-34 2.6E-38 277.5 20.4 259 36-353 15-343 (351)
15 1eep_A Inosine 5'-monophosphat 100.0 3.5E-30 1.2E-34 256.4 23.1 297 41-354 10-385 (404)
16 2e6f_A Dihydroorotate dehydrog 99.9 1.9E-24 6.4E-29 207.9 22.8 239 59-351 2-310 (314)
17 3khj_A Inosine-5-monophosphate 99.9 6.5E-24 2.2E-28 207.8 25.0 250 41-350 13-331 (361)
18 1jub_A Dihydroorotate dehydrog 99.9 7.8E-24 2.7E-28 203.3 24.5 238 61-351 2-308 (311)
19 1gte_A Dihydropyrimidine dehyd 99.9 7E-24 2.4E-28 233.0 25.3 254 47-349 519-851 (1025)
20 1ea0_A Glutamate synthase [NAD 99.9 5.1E-24 1.8E-28 234.3 23.6 301 7-348 795-1162(1479)
21 4ef8_A Dihydroorotate dehydrog 99.9 2.6E-23 8.9E-28 202.7 23.2 249 49-351 25-343 (354)
22 1ofd_A Ferredoxin-dependent gl 99.9 7E-23 2.4E-27 225.8 23.3 273 40-353 839-1203(1520)
23 1vhn_A Putative flavin oxidore 99.9 5.8E-24 2E-28 205.1 12.8 238 69-353 2-273 (318)
24 3ffs_A Inosine-5-monophosphate 99.9 3.3E-22 1.1E-26 197.5 25.0 253 42-350 11-370 (400)
25 4fo4_A Inosine 5'-monophosphat 99.9 1.6E-22 5.5E-27 197.9 20.1 254 42-350 15-335 (366)
26 1ep3_A Dihydroorotate dehydrog 99.9 2.8E-22 9.5E-27 192.0 20.9 240 56-351 2-306 (311)
27 3oix_A Putative dihydroorotate 99.9 1.4E-21 4.7E-26 190.0 24.2 240 58-350 35-340 (345)
28 3i65_A Dihydroorotate dehydrog 99.9 6.2E-22 2.1E-26 195.7 21.9 122 222-351 268-411 (415)
29 3zwt_A Dihydroorotate dehydrog 99.9 1.9E-21 6.6E-26 190.6 24.6 244 56-351 45-364 (367)
30 1f76_A Dihydroorotate dehydrog 99.9 4.4E-21 1.5E-25 186.1 23.7 207 58-311 42-323 (336)
31 1tv5_A Dhodehase, dihydroorota 99.9 7.3E-21 2.5E-25 190.2 23.7 123 221-351 295-439 (443)
32 1me8_A Inosine-5'-monophosphat 99.9 1.4E-20 4.7E-25 192.1 20.9 151 216-366 276-489 (503)
33 4af0_A Inosine-5'-monophosphat 99.9 8.4E-20 2.9E-24 183.5 23.9 136 215-350 314-523 (556)
34 3tjx_A Dihydroorotate dehydrog 99.8 1E-19 3.6E-24 177.8 22.2 243 55-351 31-343 (354)
35 3b0p_A TRNA-dihydrouridine syn 99.8 2E-19 7E-24 175.5 23.9 238 70-353 2-281 (350)
36 3usb_A Inosine-5'-monophosphat 99.8 2.2E-19 7.6E-24 183.3 23.4 135 216-350 290-481 (511)
37 4avf_A Inosine-5'-monophosphat 99.8 9.2E-19 3.1E-23 178.0 26.7 136 215-350 262-459 (490)
38 1vrd_A Inosine-5'-monophosphat 99.8 1.4E-18 4.8E-23 176.8 23.6 136 216-351 271-463 (494)
39 4fxs_A Inosine-5'-monophosphat 99.8 1.9E-18 6.4E-23 175.9 22.4 135 216-350 265-458 (496)
40 1zfj_A Inosine monophosphate d 99.8 1.3E-17 4.3E-22 169.6 21.3 137 216-352 267-463 (491)
41 1jcn_A Inosine monophosphate d 99.8 1.2E-17 3.9E-22 170.9 18.7 134 215-350 288-482 (514)
42 2cu0_A Inosine-5'-monophosphat 99.8 2.5E-17 8.5E-22 167.4 19.2 132 216-350 262-453 (486)
43 2z6i_A Trans-2-enoyl-ACP reduc 99.7 2.9E-16 9.8E-21 152.1 21.0 184 64-314 7-199 (332)
44 2gjl_A Hypothetical protein PA 99.7 5.3E-16 1.8E-20 149.9 21.7 194 63-319 9-214 (328)
45 3bo9_A Putative nitroalkan dio 99.7 4.5E-16 1.5E-20 150.4 20.7 187 68-319 23-218 (326)
46 3bw2_A 2-nitropropane dioxygen 99.6 2.8E-14 9.4E-19 140.0 21.9 94 216-313 140-244 (369)
47 1z41_A YQJM, probable NADH-dep 99.6 1.5E-13 5E-18 133.4 22.7 224 62-311 8-312 (338)
48 2gou_A Oxidoreductase, FMN-bin 99.5 1.2E-12 4.1E-17 128.3 18.8 220 62-311 8-327 (365)
49 2r14_A Morphinone reductase; H 99.5 2.5E-12 8.6E-17 126.4 19.2 221 61-311 13-333 (377)
50 1vyr_A Pentaerythritol tetrani 99.5 6.5E-12 2.2E-16 122.9 22.1 221 62-311 8-328 (364)
51 3gr7_A NADPH dehydrogenase; fl 99.4 1E-11 3.5E-16 120.5 22.5 225 61-311 7-312 (340)
52 2hsa_B 12-oxophytodienoate red 99.4 4E-11 1.4E-15 118.8 22.9 149 136-311 171-353 (402)
53 2uva_G Fatty acid synthase bet 99.4 2.2E-12 7.6E-17 148.6 14.5 206 48-315 558-804 (2060)
54 3hgj_A Chromate reductase; TIM 99.4 8.1E-11 2.8E-15 114.5 22.4 94 215-311 210-323 (349)
55 1icp_A OPR1, 12-oxophytodienoa 99.3 3.2E-11 1.1E-15 118.5 18.7 220 62-311 19-335 (376)
56 3l5a_A NADH/flavin oxidoreduct 99.3 7.5E-11 2.6E-15 117.4 18.0 239 47-311 13-351 (419)
57 3kru_A NADH:flavin oxidoreduct 99.3 2.2E-10 7.6E-15 111.1 20.7 93 215-311 201-312 (343)
58 1ps9_A 2,4-dienoyl-COA reducta 99.3 1.2E-10 4E-15 122.5 18.6 224 62-311 8-315 (671)
59 3l5l_A Xenobiotic reductase A; 99.2 6.8E-10 2.3E-14 108.6 20.4 95 215-311 216-330 (363)
60 1o94_A Tmadh, trimethylamine d 99.2 3.1E-10 1.1E-14 120.5 18.2 223 62-311 12-326 (729)
61 3k30_A Histamine dehydrogenase 99.2 4.6E-10 1.6E-14 118.4 18.4 224 61-311 16-329 (690)
62 1y0e_A Putative N-acetylmannos 99.2 1.4E-09 4.7E-14 98.7 17.9 92 216-310 112-208 (223)
63 3gka_A N-ethylmaleimide reduct 99.2 2E-09 7E-14 105.0 20.1 86 215-311 219-321 (361)
64 4ab4_A Xenobiotic reductase B; 99.2 2.5E-09 8.7E-14 104.3 20.4 86 215-311 211-313 (362)
65 3igs_A N-acetylmannosamine-6-p 99.2 2.3E-09 7.8E-14 98.5 18.8 90 216-310 124-214 (232)
66 3q58_A N-acetylmannosamine-6-p 99.1 1.3E-09 4.5E-14 99.9 16.5 91 216-311 124-215 (229)
67 1xm3_A Thiazole biosynthesis p 99.1 9.1E-09 3.1E-13 96.3 21.8 198 62-311 3-212 (264)
68 1mzh_A Deoxyribose-phosphate a 99.0 4.2E-09 1.4E-13 96.2 15.3 90 214-308 108-206 (225)
69 2uv8_G Fatty acid synthase sub 98.9 6.2E-09 2.1E-13 119.7 15.4 192 63-315 584-811 (2051)
70 1wv2_A Thiazole moeity, thiazo 98.9 3.7E-08 1.3E-12 90.7 17.2 86 222-311 135-221 (265)
71 3zen_D Fatty acid synthase; tr 98.7 1.9E-08 6.3E-13 119.6 10.7 211 47-315 402-655 (3089)
72 3aty_A Tcoye, prostaglandin F2 98.7 1E-07 3.5E-12 93.6 13.5 90 215-311 235-341 (379)
73 1wa3_A 2-keto-3-deoxy-6-phosph 98.7 3E-07 1E-11 82.1 15.2 160 132-311 18-183 (205)
74 4adt_A Pyridoxine biosynthetic 98.7 2.4E-08 8.2E-13 94.7 7.1 112 221-341 124-267 (297)
75 3tsm_A IGPS, indole-3-glycerol 98.7 4.5E-07 1.5E-11 84.9 15.3 87 221-311 168-254 (272)
76 1qop_A Tryptophan synthase alp 98.6 1.4E-06 4.9E-11 81.3 17.5 49 264-314 194-242 (268)
77 3qja_A IGPS, indole-3-glycerol 98.6 3.1E-07 1.1E-11 86.2 12.8 88 220-311 160-247 (272)
78 1yxy_A Putative N-acetylmannos 98.6 2.3E-07 7.7E-12 84.7 10.8 91 216-310 126-219 (234)
79 2qjg_A Putative aldolase MJ040 98.6 2.4E-07 8.2E-12 86.5 11.1 184 68-311 30-242 (273)
80 2zbt_A Pyridoxal biosynthesis 98.6 2.8E-08 9.6E-13 94.2 4.7 122 222-352 125-278 (297)
81 3nav_A Tryptophan synthase alp 98.6 2.4E-06 8.3E-11 80.0 17.4 82 231-314 161-245 (271)
82 2yzr_A Pyridoxal biosynthesis 98.5 1.2E-06 4E-11 83.5 14.5 45 265-311 230-276 (330)
83 4a3u_A NCR, NADH\:flavin oxido 98.5 6.9E-06 2.4E-10 79.9 19.5 93 216-311 211-320 (358)
84 2v82_A 2-dehydro-3-deoxy-6-pho 98.5 7.2E-07 2.4E-11 80.1 11.6 109 218-337 97-205 (212)
85 2nv1_A Pyridoxal biosynthesis 98.5 3.8E-08 1.3E-12 93.8 3.3 121 221-350 124-276 (305)
86 3o07_A Pyridoxine biosynthesis 98.5 2.5E-07 8.5E-12 85.9 8.3 89 220-311 113-234 (291)
87 3oa3_A Aldolase; structural ge 98.5 3.7E-06 1.3E-10 78.9 16.4 91 215-307 165-264 (288)
88 3vnd_A TSA, tryptophan synthas 98.5 5.9E-06 2E-10 77.2 17.1 82 231-314 159-243 (267)
89 1ka9_F Imidazole glycerol phos 98.4 8.1E-07 2.8E-11 81.7 10.6 76 233-311 155-230 (252)
90 1rd5_A Tryptophan synthase alp 98.4 9.8E-06 3.4E-10 75.2 17.9 112 221-334 142-259 (262)
91 1yad_A Regulatory protein TENI 98.4 2.5E-06 8.4E-11 77.1 13.4 80 229-311 116-197 (221)
92 1h5y_A HISF; histidine biosynt 98.4 1.2E-06 4.2E-11 79.8 11.3 76 233-311 157-232 (253)
93 1geq_A Tryptophan synthase alp 98.4 2.7E-06 9.3E-11 78.1 13.2 109 221-332 132-245 (248)
94 2ekc_A AQ_1548, tryptophan syn 98.4 9.6E-06 3.3E-10 75.5 16.7 61 265-328 196-256 (262)
95 3ngj_A Deoxyribose-phosphate a 98.4 5.8E-06 2E-10 75.7 14.4 87 216-307 135-230 (239)
96 1thf_D HISF protein; thermophI 98.4 1E-06 3.6E-11 81.0 9.5 76 233-311 154-229 (253)
97 3f4w_A Putative hexulose 6 pho 98.4 7.1E-06 2.4E-10 73.3 14.4 88 221-311 102-192 (211)
98 2htm_A Thiazole biosynthesis p 98.3 1.3E-06 4.6E-11 80.6 9.3 80 229-311 131-212 (268)
99 2y88_A Phosphoribosyl isomeras 98.3 8.1E-07 2.8E-11 81.3 7.8 76 233-311 152-230 (244)
100 3tjl_A NADPH dehydrogenase; OL 98.3 9E-07 3.1E-11 87.4 8.2 95 215-311 226-351 (407)
101 2w6r_A Imidazole glycerol phos 98.3 8.7E-07 3E-11 82.2 7.5 76 233-311 159-234 (266)
102 1jvn_A Glutamine, bifunctional 98.3 1.9E-06 6.5E-11 88.6 10.5 76 233-311 455-531 (555)
103 1qo2_A Molecule: N-((5-phospho 98.3 8.6E-07 2.9E-11 81.2 6.9 75 234-311 148-228 (241)
104 1vc4_A Indole-3-glycerol phosp 98.3 7.4E-06 2.5E-10 76.0 13.1 86 221-311 153-241 (254)
105 1vzw_A Phosphoribosyl isomeras 98.3 1.3E-06 4.5E-11 80.0 7.5 74 233-311 149-227 (244)
106 3r12_A Deoxyribose-phosphate a 98.3 2E-05 6.9E-10 72.9 15.1 87 216-307 151-246 (260)
107 2p10_A MLL9387 protein; putati 98.3 4E-05 1.4E-09 71.4 17.0 209 71-333 27-279 (286)
108 1pii_A N-(5'phosphoribosyl)ant 98.2 1.8E-05 6.2E-10 79.1 15.5 114 221-348 156-269 (452)
109 3ndo_A Deoxyribose-phosphate a 98.2 2.2E-05 7.5E-10 71.6 14.6 87 216-307 120-220 (231)
110 1ub3_A Aldolase protein; schif 98.2 2.7E-05 9.3E-10 70.6 14.9 87 214-305 109-204 (220)
111 2yw3_A 4-hydroxy-2-oxoglutarat 98.2 4.9E-05 1.7E-09 68.2 16.4 83 219-310 101-183 (207)
112 2tps_A Protein (thiamin phosph 98.2 8.7E-06 3E-10 73.5 11.0 95 214-311 107-205 (227)
113 3tdn_A FLR symmetric alpha-bet 98.2 3.8E-06 1.3E-10 77.2 8.6 75 233-310 38-112 (247)
114 3o63_A Probable thiamine-phosp 98.2 1E-05 3.5E-10 74.5 11.4 96 215-311 126-224 (243)
115 4e38_A Keto-hydroxyglutarate-a 98.2 1.4E-05 4.7E-10 73.1 11.5 169 126-310 36-206 (232)
116 4a29_A Engineered retro-aldol 98.1 7.5E-05 2.6E-09 68.8 16.1 89 219-311 150-238 (258)
117 1xi3_A Thiamine phosphate pyro 98.1 1.2E-05 4E-10 71.8 10.5 79 230-311 115-195 (215)
118 2agk_A 1-(5-phosphoribosyl)-5- 98.1 4.6E-06 1.6E-10 77.7 7.1 74 234-309 162-239 (260)
119 3ovp_A Ribulose-phosphate 3-ep 98.1 9E-05 3.1E-09 67.5 15.4 70 262-339 155-224 (228)
120 3tdn_A FLR symmetric alpha-bet 98.1 4.7E-07 1.6E-11 83.4 0.0 75 234-311 160-234 (247)
121 1h1y_A D-ribulose-5-phosphate 98.1 0.0003 1E-08 63.7 18.4 183 91-333 22-222 (228)
122 4gbu_A NADPH dehydrogenase 1; 98.0 0.00014 4.7E-09 71.7 16.9 40 270-311 313-353 (400)
123 3jr2_A Hexulose-6-phosphate sy 98.0 3.9E-05 1.3E-09 69.2 11.1 168 89-311 20-199 (218)
124 1i4n_A Indole-3-glycerol phosp 98.0 9.4E-05 3.2E-09 68.4 13.4 86 221-311 149-235 (251)
125 3tha_A Tryptophan synthase alp 98.0 0.0001 3.5E-09 68.1 13.4 86 231-319 152-240 (252)
126 1ujp_A Tryptophan synthase alp 98.0 9.9E-05 3.4E-09 69.0 13.5 79 231-313 155-236 (271)
127 1ka9_F Imidazole glycerol phos 97.9 3.2E-05 1.1E-09 70.9 8.5 76 233-311 34-109 (252)
128 1thf_D HISF protein; thermophI 97.9 3.5E-05 1.2E-09 70.7 8.6 76 233-311 33-108 (253)
129 3inp_A D-ribulose-phosphate 3- 97.9 0.0003 1E-08 64.8 14.8 111 215-332 78-243 (246)
130 1rpx_A Protein (ribulose-phosp 97.9 0.00041 1.4E-08 62.7 15.4 168 91-311 26-212 (230)
131 1w8s_A FBP aldolase, fructose- 97.8 0.00048 1.7E-08 64.0 16.0 66 236-311 165-236 (263)
132 1h5y_A HISF; histidine biosynt 97.8 6.1E-05 2.1E-09 68.4 9.6 76 232-310 35-110 (253)
133 2fli_A Ribulose-phosphate 3-ep 97.8 0.00017 5.9E-09 64.6 11.9 168 91-311 19-203 (220)
134 1vhc_A Putative KHG/KDPG aldol 97.8 0.00014 4.7E-09 66.1 11.1 85 216-311 105-190 (224)
135 1wbh_A KHG/KDPG aldolase; lyas 97.8 0.00024 8.2E-09 64.1 12.0 85 216-310 103-188 (214)
136 2y88_A Phosphoribosyl isomeras 97.7 0.00018 6.3E-09 65.4 10.6 75 233-311 34-108 (244)
137 3glc_A Aldolase LSRF; TIM barr 97.7 0.00066 2.3E-08 64.1 14.4 79 220-311 169-262 (295)
138 3vk5_A MOEO5; TIM barrel, tran 97.7 0.00012 4.1E-09 68.3 9.1 69 236-310 192-260 (286)
139 3lab_A Putative KDPG (2-keto-3 97.7 0.00023 8E-09 64.1 10.3 164 86-309 23-190 (217)
140 1qo2_A Molecule: N-((5-phospho 97.7 3.8E-05 1.3E-09 70.1 5.2 75 233-311 33-107 (241)
141 3s1x_A Probable transaldolase; 97.6 0.0026 9E-08 57.4 16.8 181 89-328 8-212 (223)
142 1vcv_A Probable deoxyribose-ph 97.6 0.0015 5E-08 59.4 15.2 90 215-306 105-220 (226)
143 1qap_A Quinolinic acid phospho 97.6 0.00036 1.2E-08 66.0 11.4 84 214-309 199-283 (296)
144 1vzw_A Phosphoribosyl isomeras 97.6 0.00012 4.2E-09 66.7 7.9 74 233-310 35-108 (244)
145 2w6r_A Imidazole glycerol phos 97.6 8.7E-05 3E-09 68.6 6.7 76 232-310 32-107 (266)
146 3ajx_A 3-hexulose-6-phosphate 97.6 0.00079 2.7E-08 59.6 12.8 75 232-311 115-191 (207)
147 1mxs_A KDPG aldolase; 2-keto-3 97.6 0.00022 7.7E-09 64.8 9.3 84 216-310 113-198 (225)
148 1tqj_A Ribulose-phosphate 3-ep 97.6 0.00034 1.2E-08 63.6 10.5 167 92-311 21-206 (230)
149 3vzx_A Heptaprenylglyceryl pho 97.6 0.00048 1.6E-08 62.6 11.2 81 236-329 146-226 (228)
150 1ypf_A GMP reductase; GUAC, pu 97.6 0.00019 6.4E-09 69.1 9.0 131 100-306 45-177 (336)
151 1n7k_A Deoxyribose-phosphate a 97.6 0.0015 5.1E-08 59.6 14.4 65 236-306 154-221 (234)
152 3r8r_A Transaldolase; pentose 97.6 0.012 3.9E-07 52.8 19.9 181 89-328 8-210 (212)
153 3ceu_A Thiamine phosphate pyro 97.6 0.00014 4.8E-09 65.2 7.4 82 228-311 93-177 (210)
154 3lab_A Putative KDPG (2-keto-3 97.5 0.0015 5.1E-08 58.9 13.8 117 126-305 15-138 (217)
155 2b7n_A Probable nicotinate-nuc 97.5 0.00023 7.8E-09 66.6 8.4 85 214-310 172-261 (273)
156 2a4a_A Deoxyribose-phosphate a 97.5 0.00093 3.2E-08 62.5 12.3 86 214-301 147-249 (281)
157 1x1o_A Nicotinate-nucleotide p 97.5 0.00075 2.6E-08 63.4 11.7 84 214-309 186-271 (286)
158 3cwo_X Beta/alpha-barrel prote 97.5 0.00042 1.4E-08 61.6 9.2 76 233-311 133-208 (237)
159 1p1x_A Deoxyribose-phosphate a 97.4 0.00089 3E-08 62.0 11.3 83 215-301 124-222 (260)
160 3tqv_A Nicotinate-nucleotide p 97.3 0.00089 3E-08 62.8 10.0 84 214-309 189-273 (287)
161 2jbm_A Nicotinate-nucleotide p 97.3 0.00043 1.5E-08 65.6 7.5 84 214-309 187-275 (299)
162 3kts_A Glycerol uptake operon 97.3 0.00034 1.2E-08 61.8 6.2 143 124-312 31-185 (192)
163 2qr6_A IMP dehydrogenase/GMP r 97.2 0.00092 3.1E-08 65.5 9.5 88 216-307 150-240 (393)
164 2czd_A Orotidine 5'-phosphate 97.2 0.00081 2.8E-08 60.0 8.2 81 235-332 124-205 (208)
165 2f6u_A GGGPS, (S)-3-O-geranylg 97.2 0.00083 2.8E-08 61.3 8.2 72 232-311 147-223 (234)
166 3exr_A RMPD (hexulose-6-phosph 97.2 0.00032 1.1E-08 63.5 5.0 97 231-334 122-218 (221)
167 1jcn_A Inosine monophosphate d 97.1 0.0064 2.2E-07 61.6 14.2 68 233-306 257-324 (514)
168 1viz_A PCRB protein homolog; s 97.1 0.0012 3.9E-08 60.6 7.7 72 232-311 140-215 (240)
169 3c2e_A Nicotinate-nucleotide p 97.1 0.00048 1.6E-08 65.1 5.2 84 214-309 189-280 (294)
170 1tqx_A D-ribulose-5-phosphate 97.1 0.0043 1.5E-07 56.3 11.3 109 216-333 109-222 (227)
171 1vpx_A Protein (transaldolase 97.1 0.043 1.5E-06 49.7 17.8 107 221-330 112-223 (230)
172 3l0g_A Nicotinate-nucleotide p 97.0 0.0023 7.7E-08 60.3 9.4 83 214-308 198-281 (300)
173 3gnn_A Nicotinate-nucleotide p 97.0 0.0018 6.3E-08 60.9 8.5 82 215-308 201-283 (298)
174 1o4u_A Type II quinolic acid p 97.0 0.00081 2.8E-08 63.2 6.0 84 214-309 183-271 (285)
175 3paj_A Nicotinate-nucleotide p 97.0 0.0043 1.5E-07 59.0 10.8 83 214-308 222-305 (320)
176 1q6o_A Humps, 3-keto-L-gulonat 96.9 0.0038 1.3E-07 55.9 9.6 102 221-333 105-212 (216)
177 3nvt_A 3-deoxy-D-arabino-heptu 96.9 0.05 1.7E-06 53.1 18.2 204 55-308 123-348 (385)
178 4gj1_A 1-(5-phosphoribosyl)-5- 96.9 0.0011 3.8E-08 60.7 5.9 74 233-309 34-107 (243)
179 3nl6_A Thiamine biosynthetic b 96.9 0.0085 2.9E-07 61.2 12.9 97 214-311 98-214 (540)
180 3ve9_A Orotidine-5'-phosphate 96.9 0.0022 7.6E-08 57.7 7.6 86 234-337 119-205 (215)
181 1qpo_A Quinolinate acid phosph 96.9 0.0027 9.1E-08 59.6 8.2 84 214-309 185-272 (284)
182 1xg4_A Probable methylisocitra 96.8 0.077 2.6E-06 49.9 17.8 179 90-312 26-241 (295)
183 1w0m_A TIM, triosephosphate is 96.8 0.012 4E-07 53.4 11.5 37 275-311 171-207 (226)
184 1y0e_A Putative N-acetylmannos 96.7 0.031 1.1E-06 49.7 13.9 118 133-308 20-148 (223)
185 3o07_A Pyridoxine biosynthesis 96.7 0.0011 3.8E-08 61.6 3.9 119 140-305 22-141 (291)
186 4dbe_A Orotidine 5'-phosphate 96.6 0.0059 2E-07 55.2 8.4 88 233-338 125-213 (222)
187 4gj1_A 1-(5-phosphoribosyl)-5- 96.6 0.0065 2.2E-07 55.6 8.5 73 234-311 155-229 (243)
188 3cu2_A Ribulose-5-phosphate 3- 96.5 0.0068 2.3E-07 55.3 8.4 68 242-310 147-221 (237)
189 1jvn_A Glutamine, bifunctional 96.5 0.0024 8.3E-08 65.5 6.0 76 234-311 284-372 (555)
190 2yw3_A 4-hydroxy-2-oxoglutarat 96.4 0.037 1.3E-06 49.2 12.5 110 132-305 21-130 (207)
191 3iwp_A Copper homeostasis prot 96.4 0.039 1.3E-06 51.5 12.5 68 234-306 170-238 (287)
192 3ctl_A D-allulose-6-phosphate 96.4 0.019 6.4E-07 52.2 10.2 86 242-333 127-218 (231)
193 3w01_A Heptaprenylglyceryl pho 96.3 0.012 4.2E-07 53.5 8.7 61 243-311 159-219 (235)
194 4eiv_A Deoxyribose-phosphate a 96.3 0.087 3E-06 49.2 14.6 90 216-310 143-262 (297)
195 3q58_A N-acetylmannosamine-6-p 96.3 0.071 2.4E-06 48.2 13.7 83 214-305 61-155 (229)
196 1l6w_A Fructose-6-phosphate al 96.3 0.11 3.7E-06 46.8 14.5 105 221-328 102-211 (220)
197 2h6r_A Triosephosphate isomera 96.3 0.01 3.4E-07 53.4 7.8 90 221-311 110-204 (219)
198 3khj_A Inosine-5-monophosphate 96.3 0.021 7.1E-07 55.3 10.5 84 216-306 89-173 (361)
199 3igs_A N-acetylmannosamine-6-p 96.2 0.082 2.8E-06 47.9 13.6 83 214-305 61-155 (232)
200 2pgw_A Muconate cycloisomerase 96.2 0.22 7.5E-06 48.2 17.6 121 133-309 146-274 (384)
201 1vkf_A Glycerol uptake operon 96.2 0.0043 1.5E-07 54.5 4.5 64 235-312 120-183 (188)
202 4e38_A Keto-hydroxyglutarate-a 96.1 0.021 7.2E-07 51.9 9.2 76 215-305 77-153 (232)
203 1vc4_A Indole-3-glycerol phosp 95.9 0.043 1.5E-06 50.5 10.4 72 233-310 68-139 (254)
204 1mdl_A Mandelate racemase; iso 95.9 0.079 2.7E-06 50.8 12.5 119 133-307 143-271 (359)
205 2agk_A 1-(5-phosphoribosyl)-5- 95.8 0.0051 1.7E-07 56.9 3.7 67 233-310 41-107 (260)
206 2ovl_A Putative racemase; stru 95.8 0.1 3.5E-06 50.3 13.2 118 134-307 146-273 (371)
207 1zfj_A Inosine monophosphate d 95.8 0.021 7.2E-07 57.3 8.4 246 42-306 13-302 (491)
208 2vc6_A MOSA, dihydrodipicolina 95.8 0.86 2.9E-05 42.4 19.1 179 73-309 7-208 (292)
209 1wx0_A Transaldolase; structur 95.8 0.17 5.9E-06 45.5 13.6 94 221-317 109-205 (223)
210 3r2g_A Inosine 5'-monophosphat 95.8 0.028 9.7E-07 54.3 8.7 68 233-306 102-169 (361)
211 2ehh_A DHDPS, dihydrodipicolin 95.7 1.4 4.7E-05 41.0 19.9 179 73-309 7-208 (294)
212 1to3_A Putative aldolase YIHT; 95.7 0.033 1.1E-06 52.7 8.6 72 235-312 182-260 (304)
213 3daq_A DHDPS, dihydrodipicolin 95.6 0.039 1.3E-06 51.8 8.9 91 236-329 29-124 (292)
214 3cpr_A Dihydrodipicolinate syn 95.5 0.061 2.1E-06 50.7 10.0 90 236-328 43-137 (304)
215 3tak_A DHDPS, dihydrodipicolin 95.4 0.049 1.7E-06 51.0 8.9 90 236-328 28-122 (291)
216 1yxy_A Putative N-acetylmannos 95.4 0.16 5.4E-06 45.5 12.0 84 216-303 63-157 (234)
217 3flu_A DHDPS, dihydrodipicolin 95.4 0.055 1.9E-06 50.8 9.2 90 236-328 34-128 (297)
218 3tsm_A IGPS, indole-3-glycerol 95.4 0.08 2.7E-06 49.2 10.0 72 233-310 82-153 (272)
219 1vhc_A Putative KHG/KDPG aldol 95.4 0.055 1.9E-06 48.8 8.7 114 129-305 22-136 (224)
220 1xky_A Dihydrodipicolinate syn 95.3 0.056 1.9E-06 50.9 9.0 89 236-327 39-132 (301)
221 1f6k_A N-acetylneuraminate lya 95.3 0.055 1.9E-06 50.7 8.9 91 236-329 30-126 (293)
222 3si9_A DHDPS, dihydrodipicolin 95.3 0.045 1.5E-06 51.9 8.2 90 236-328 49-143 (315)
223 3m47_A Orotidine 5'-phosphate 95.3 0.027 9.1E-07 51.0 6.4 82 234-333 141-223 (228)
224 4fo4_A Inosine 5'-monophosphat 95.3 0.085 2.9E-06 51.1 10.3 85 216-306 90-177 (366)
225 2wkj_A N-acetylneuraminate lya 95.3 0.063 2.2E-06 50.6 9.2 93 236-331 38-135 (303)
226 1zco_A 2-dehydro-3-deoxyphosph 95.2 1 3.5E-05 41.4 17.1 87 221-309 129-230 (262)
227 3qze_A DHDPS, dihydrodipicolin 95.2 0.055 1.9E-06 51.3 8.6 90 236-328 50-144 (314)
228 2hzg_A Mandelate racemase/muco 95.2 1.4 4.8E-05 42.7 19.0 124 132-308 143-279 (401)
229 2yxg_A DHDPS, dihydrodipicolin 95.2 0.065 2.2E-06 50.1 9.0 90 236-328 27-121 (289)
230 3l21_A DHDPS, dihydrodipicolin 95.2 0.053 1.8E-06 51.2 8.4 89 236-327 42-135 (304)
231 3qja_A IGPS, indole-3-glycerol 95.2 0.11 3.6E-06 48.4 10.2 70 234-309 76-145 (272)
232 3na8_A Putative dihydrodipicol 95.2 0.049 1.7E-06 51.7 8.0 90 236-328 51-145 (315)
233 2bdq_A Copper homeostasis prot 95.2 0.45 1.5E-05 42.8 13.8 126 130-306 70-207 (224)
234 3flu_A DHDPS, dihydrodipicolin 95.2 2.1 7.1E-05 39.9 19.5 180 73-309 13-214 (297)
235 1rvk_A Isomerase/lactonizing e 95.1 0.35 1.2E-05 46.6 14.3 124 133-308 148-284 (382)
236 1xky_A Dihydrodipicolinate syn 95.1 2.1 7.3E-05 39.9 21.6 182 73-311 18-221 (301)
237 1xm3_A Thiazole biosynthesis p 95.1 0.056 1.9E-06 49.9 8.1 37 215-251 171-208 (264)
238 3tak_A DHDPS, dihydrodipicolin 95.1 2.1 7.1E-05 39.7 19.5 181 73-309 7-208 (291)
239 1o5k_A DHDPS, dihydrodipicolin 95.1 1.6 5.3E-05 41.0 18.3 179 73-309 19-223 (306)
240 1wbh_A KHG/KDPG aldolase; lyas 95.1 0.069 2.4E-06 47.8 8.4 116 127-305 19-135 (214)
241 2ehh_A DHDPS, dihydrodipicolin 95.1 0.065 2.2E-06 50.2 8.6 90 236-328 27-121 (294)
242 3fkr_A L-2-keto-3-deoxyarabona 95.1 0.067 2.3E-06 50.6 8.8 93 236-328 35-132 (309)
243 2r8w_A AGR_C_1641P; APC7498, d 95.1 0.066 2.3E-06 51.2 8.8 90 236-328 61-155 (332)
244 1vr6_A Phospho-2-dehydro-3-deo 95.1 0.4 1.4E-05 46.1 14.1 268 24-340 48-346 (350)
245 2v9d_A YAGE; dihydrodipicolini 95.1 0.064 2.2E-06 51.5 8.6 89 236-327 58-151 (343)
246 2rfg_A Dihydrodipicolinate syn 95.1 0.064 2.2E-06 50.4 8.4 90 236-328 27-121 (297)
247 2ojp_A DHDPS, dihydrodipicolin 95.0 0.062 2.1E-06 50.3 8.3 76 236-311 28-108 (292)
248 3qfe_A Putative dihydrodipicol 94.9 0.087 3E-06 50.0 9.1 92 236-328 38-134 (318)
249 3m5v_A DHDPS, dihydrodipicolin 94.9 0.077 2.6E-06 49.9 8.7 90 236-328 34-129 (301)
250 3b4u_A Dihydrodipicolinate syn 94.9 0.066 2.2E-06 50.2 8.0 92 236-330 30-127 (294)
251 1o5k_A DHDPS, dihydrodipicolin 94.9 0.065 2.2E-06 50.6 8.0 76 236-311 39-119 (306)
252 2vc6_A MOSA, dihydrodipicolina 94.9 0.059 2E-06 50.5 7.6 90 236-328 27-121 (292)
253 4af0_A Inosine-5'-monophosphat 94.8 0.075 2.6E-06 53.8 8.6 245 42-307 61-351 (556)
254 2wqp_A Polysialic acid capsule 94.8 1.4 4.9E-05 42.1 17.2 239 63-341 7-273 (349)
255 1vs1_A 3-deoxy-7-phosphoheptul 94.8 1.4 4.8E-05 40.8 16.7 204 57-309 21-245 (276)
256 3e96_A Dihydrodipicolinate syn 94.8 0.046 1.6E-06 51.9 6.7 92 236-331 39-135 (316)
257 2rfg_A Dihydrodipicolinate syn 94.7 1.9 6.4E-05 40.2 17.7 179 73-309 7-207 (297)
258 2nql_A AGR_PAT_674P, isomerase 94.7 0.19 6.3E-06 48.8 11.1 118 133-307 163-290 (388)
259 2yyu_A Orotidine 5'-phosphate 94.7 0.081 2.8E-06 48.2 8.0 74 239-332 152-235 (246)
260 4avf_A Inosine-5'-monophosphat 94.7 0.082 2.8E-06 53.2 8.7 68 233-306 231-298 (490)
261 3s5o_A 4-hydroxy-2-oxoglutarat 94.7 0.083 2.9E-06 49.8 8.1 92 236-328 41-137 (307)
262 1vli_A Spore coat polysacchari 94.7 2.2 7.7E-05 41.3 18.3 199 63-302 16-244 (385)
263 1mxs_A KDPG aldolase; 2-keto-3 94.6 0.062 2.1E-06 48.5 6.9 116 127-305 29-145 (225)
264 3d0c_A Dihydrodipicolinate syn 94.6 0.064 2.2E-06 50.8 7.2 90 236-329 39-133 (314)
265 1i4n_A Indole-3-glycerol phosp 94.5 0.62 2.1E-05 42.6 13.4 86 213-307 92-179 (251)
266 4fxs_A Inosine-5'-monophosphat 94.5 0.1 3.5E-06 52.6 8.7 244 42-306 12-300 (496)
267 1nu5_A Chloromuconate cycloiso 94.5 0.79 2.7E-05 43.9 14.8 119 133-307 141-270 (370)
268 3ru6_A Orotidine 5'-phosphate 94.5 0.11 3.7E-06 49.0 8.3 64 234-311 162-235 (303)
269 3ffs_A Inosine-5-monophosphate 94.5 0.071 2.4E-06 52.3 7.3 67 233-306 146-212 (400)
270 3si9_A DHDPS, dihydrodipicolin 94.5 3.3 0.00011 38.9 22.0 180 73-309 28-230 (315)
271 3h5d_A DHDPS, dihydrodipicolin 94.5 0.11 3.8E-06 49.1 8.5 89 236-327 34-128 (311)
272 3h5d_A DHDPS, dihydrodipicolin 94.4 3.3 0.00011 38.8 21.0 182 73-311 13-216 (311)
273 2rdx_A Mandelate racemase/muco 94.4 0.37 1.3E-05 46.5 12.2 115 133-307 144-268 (379)
274 3eb2_A Putative dihydrodipicol 94.4 3.3 0.00011 38.6 21.1 181 73-309 10-211 (300)
275 3daq_A DHDPS, dihydrodipicolin 94.3 1.7 5.7E-05 40.4 16.2 179 73-308 9-209 (292)
276 3iv3_A Tagatose 1,6-diphosphat 94.3 0.12 3.9E-06 49.5 8.1 106 236-351 194-318 (332)
277 3d0c_A Dihydrodipicolinate syn 94.3 3.6 0.00012 38.6 19.2 178 73-308 17-216 (314)
278 2qgy_A Enolase from the enviro 94.2 0.51 1.7E-05 45.8 12.8 118 133-306 148-275 (391)
279 2v9d_A YAGE; dihydrodipicolini 94.2 4 0.00014 38.8 19.0 180 72-308 36-241 (343)
280 3ldv_A Orotidine 5'-phosphate 94.2 0.14 4.6E-06 47.2 8.1 79 234-332 166-254 (255)
281 3dz1_A Dihydrodipicolinate syn 94.1 0.21 7E-06 47.2 9.6 91 236-331 35-130 (313)
282 2og9_A Mandelate racemase/muco 94.1 0.6 2E-05 45.3 13.2 118 134-307 162-289 (393)
283 4adt_A Pyridoxine biosynthetic 94.1 0.15 5.1E-06 48.0 8.3 82 219-303 18-104 (297)
284 3eb2_A Putative dihydrodipicol 94.0 0.046 1.6E-06 51.4 4.8 90 236-328 31-125 (300)
285 4dpp_A DHDPS 2, dihydrodipicol 94.0 0.12 4E-06 50.0 7.6 89 236-327 86-179 (360)
286 2ojp_A DHDPS, dihydrodipicolin 93.9 1.6 5.4E-05 40.6 15.2 181 73-309 7-208 (292)
287 3nav_A Tryptophan synthase alp 93.9 0.25 8.4E-06 45.8 9.4 36 215-250 201-237 (271)
288 3ozy_A Putative mandelate race 93.8 0.51 1.7E-05 45.8 12.0 120 132-307 149-278 (389)
289 3a5f_A Dihydrodipicolinate syn 93.8 3.7 0.00013 38.0 17.6 179 73-309 8-208 (291)
290 3tfx_A Orotidine 5'-phosphate 93.8 0.18 6.1E-06 46.5 8.2 80 234-333 148-237 (259)
291 3na8_A Putative dihydrodipicol 93.8 4.5 0.00015 38.0 24.8 180 72-308 29-231 (315)
292 2yxg_A DHDPS, dihydrodipicolin 93.8 4.2 0.00014 37.6 19.0 177 73-309 7-206 (289)
293 3pm6_A Putative fructose-bisph 93.7 0.89 3E-05 42.7 12.9 114 231-344 172-298 (306)
294 1eix_A Orotidine 5'-monophosph 93.7 0.11 3.9E-06 47.2 6.7 59 239-311 158-226 (245)
295 1twd_A Copper homeostasis prot 93.7 0.29 9.7E-06 44.9 9.2 70 231-307 9-94 (256)
296 3b4u_A Dihydrodipicolinate syn 93.7 4.4 0.00015 37.6 19.9 180 73-310 9-216 (294)
297 1vrd_A Inosine-5'-monophosphat 93.7 0.19 6.4E-06 50.4 8.8 68 233-306 239-306 (494)
298 2hmc_A AGR_L_411P, dihydrodipi 93.6 0.14 4.9E-06 49.1 7.5 88 236-328 53-145 (344)
299 3m5v_A DHDPS, dihydrodipicolin 93.5 4.8 0.00016 37.4 21.3 178 73-309 14-215 (301)
300 3a5f_A Dihydrodipicolinate syn 93.4 0.14 4.8E-06 47.9 6.8 76 236-311 28-108 (291)
301 3tr2_A Orotidine 5'-phosphate 93.3 0.22 7.6E-06 45.3 7.9 80 234-333 148-237 (239)
302 3sz8_A 2-dehydro-3-deoxyphosph 93.3 2 6.9E-05 39.9 14.5 88 220-309 132-244 (285)
303 3iwp_A Copper homeostasis prot 93.3 0.23 7.9E-06 46.3 8.1 72 231-306 47-131 (287)
304 2r8w_A AGR_C_1641P; APC7498, d 93.3 5.7 0.00019 37.6 22.0 183 73-309 40-245 (332)
305 1dbt_A Orotidine 5'-phosphate 93.3 0.14 4.6E-06 46.5 6.4 76 237-332 149-234 (239)
306 2pp0_A L-talarate/galactarate 93.2 0.91 3.1E-05 44.1 12.7 118 134-307 175-302 (398)
307 1tkk_A Similar to chloromucona 93.2 4 0.00014 38.8 17.1 119 133-307 139-269 (366)
308 1pii_A N-(5'phosphoribosyl)ant 93.2 1.8 6E-05 43.0 14.7 86 213-307 99-185 (452)
309 1twd_A Copper homeostasis prot 93.1 0.79 2.7E-05 42.0 11.1 123 130-306 67-198 (256)
310 1eep_A Inosine 5'-monophosphat 93.1 0.23 8E-06 48.4 8.2 67 233-306 155-222 (404)
311 3usb_A Inosine-5'-monophosphat 93.0 0.25 8.7E-06 49.9 8.6 244 42-306 36-325 (511)
312 1hg3_A Triosephosphate isomera 93.0 0.85 2.9E-05 41.0 11.1 90 221-311 116-210 (225)
313 1geq_A Tryptophan synthase alp 93.0 0.94 3.2E-05 40.6 11.6 83 215-306 73-163 (248)
314 1nsj_A PRAI, phosphoribosyl an 92.9 1.5 5.2E-05 38.7 12.6 79 222-309 97-183 (205)
315 3cpr_A Dihydrodipicolinate syn 92.8 6.2 0.00021 36.8 19.9 178 73-309 22-221 (304)
316 3qze_A DHDPS, dihydrodipicolin 92.8 6.4 0.00022 36.9 22.5 181 73-309 29-230 (314)
317 3l21_A DHDPS, dihydrodipicolin 92.7 6.3 0.00022 36.7 20.9 180 73-311 21-222 (304)
318 2qdd_A Mandelate racemase/muco 92.7 3.4 0.00012 39.6 15.9 117 133-308 144-269 (378)
319 2oz8_A MLL7089 protein; struct 92.6 5.6 0.00019 38.3 17.3 117 134-306 145-273 (389)
320 4dwd_A Mandelate racemase/muco 92.6 3.6 0.00012 39.8 16.0 125 133-307 138-272 (393)
321 2p8b_A Mandelate racemase/muco 92.6 1.7 5.8E-05 41.5 13.5 120 132-308 139-269 (369)
322 3q94_A Fructose-bisphosphate a 92.6 2.8 9.6E-05 39.0 14.4 108 231-342 159-285 (288)
323 2zbt_A Pyridoxal biosynthesis 92.6 0.38 1.3E-05 44.7 8.6 78 220-303 19-104 (297)
324 2c6q_A GMP reductase 2; TIM ba 92.6 0.33 1.1E-05 46.6 8.3 67 234-306 121-189 (351)
325 3eez_A Putative mandelate race 92.5 1.7 5.9E-05 41.8 13.5 119 132-309 143-270 (378)
326 2qde_A Mandelate racemase/muco 92.5 1.2 4.3E-05 43.0 12.5 118 133-307 144-271 (397)
327 2v82_A 2-dehydro-3-deoxy-6-pho 92.3 0.4 1.4E-05 42.0 8.0 65 234-307 23-88 (212)
328 3i4k_A Muconate lactonizing en 92.3 3.3 0.00011 39.9 15.1 82 216-307 186-276 (383)
329 1ea0_A Glutamate synthase [NAD 92.1 1.4 4.6E-05 49.7 13.3 120 234-353 591-725 (1479)
330 3g8r_A Probable spore coat pol 91.9 3.9 0.00013 39.1 14.8 228 71-342 4-262 (350)
331 3stp_A Galactonate dehydratase 91.9 1.3 4.3E-05 43.4 11.7 127 133-309 178-314 (412)
332 3rcy_A Mandelate racemase/muco 91.8 2.6 9E-05 41.4 14.1 131 133-307 145-285 (433)
333 1v5x_A PRA isomerase, phosphor 91.8 1.6 5.4E-05 38.5 11.2 78 222-309 96-177 (203)
334 3jva_A Dipeptide epimerase; en 91.7 2.7 9.1E-05 40.0 13.6 121 132-308 137-266 (354)
335 1gvf_A Tagatose-bisphosphate a 91.7 3.7 0.00013 38.1 14.0 109 231-342 155-281 (286)
336 3s5o_A 4-hydroxy-2-oxoglutarat 91.6 8.6 0.00029 35.8 18.1 183 73-309 20-224 (307)
337 4e5t_A Mandelate racemase / mu 91.6 1.8 6.3E-05 42.1 12.5 131 133-307 150-290 (404)
338 1tzz_A Hypothetical protein L1 91.6 1.4 4.7E-05 42.6 11.6 117 134-306 165-295 (392)
339 2gdq_A YITF; mandelate racemas 91.4 1.2 4.1E-05 43.0 10.9 118 133-306 135-266 (382)
340 3vnd_A TSA, tryptophan synthas 91.4 0.82 2.8E-05 42.2 9.2 36 215-250 199-235 (267)
341 1rvg_A Fructose-1,6-bisphospha 91.4 5.3 0.00018 37.5 14.8 110 231-342 153-302 (305)
342 1wv2_A Thiazole moeity, thiazo 91.2 0.79 2.7E-05 42.1 8.7 104 123-250 102-216 (265)
343 3sjn_A Mandelate racemase/muco 91.1 1 3.5E-05 43.4 10.0 120 134-307 146-276 (374)
344 1jub_A Dihydroorotate dehydrog 91.0 0.86 2.9E-05 42.5 9.2 154 71-249 93-270 (311)
345 1s2w_A Phosphoenolpyruvate pho 90.9 0.94 3.2E-05 42.4 9.2 71 234-312 174-244 (295)
346 3vav_A 3-methyl-2-oxobutanoate 90.8 1.6 5.6E-05 40.3 10.5 84 222-306 28-126 (275)
347 1qop_A Tryptophan synthase alp 90.8 1.2 4E-05 40.9 9.6 36 215-250 198-234 (268)
348 3fkr_A L-2-keto-3-deoxyarabona 90.7 11 0.00036 35.2 21.5 180 72-307 13-219 (309)
349 2r91_A 2-keto-3-deoxy-(6-phosp 90.7 10 0.00034 34.9 23.2 174 73-308 5-198 (286)
350 2bdq_A Copper homeostasis prot 90.6 0.22 7.5E-06 44.8 4.4 70 231-307 9-97 (224)
351 2poz_A Putative dehydratase; o 90.6 1.3 4.4E-05 42.9 10.2 133 133-306 136-280 (392)
352 2ps2_A Putative mandelate race 90.5 5.6 0.00019 37.9 14.7 116 132-307 144-270 (371)
353 1vqt_A Orotidine 5'-phosphate 90.5 0.25 8.7E-06 44.0 4.7 58 235-311 131-197 (213)
354 1z41_A YQJM, probable NADH-dep 90.3 2.8 9.6E-05 39.7 12.2 87 122-249 209-306 (338)
355 3zwt_A Dihydroorotate dehydrog 90.2 0.95 3.2E-05 43.7 8.8 100 123-249 221-326 (367)
356 2nv1_A Pyridoxal biosynthesis 90.1 2.1 7.3E-05 39.8 11.0 83 217-304 16-105 (305)
357 3dz1_A Dihydrodipicolinate syn 90.1 12 0.00041 34.9 18.8 178 73-307 14-220 (313)
358 2r91_A 2-keto-3-deoxy-(6-phosp 90.1 1.1 3.8E-05 41.5 8.9 87 236-329 25-118 (286)
359 2isw_A Putative fructose-1,6-b 90.0 5.1 0.00017 37.9 13.4 109 231-342 153-304 (323)
360 3n9r_A Fructose-bisphosphate a 89.9 6.9 0.00024 36.7 14.2 110 231-342 155-304 (307)
361 1vli_A Spore coat polysacchari 89.8 4.2 0.00014 39.4 12.9 78 217-305 109-190 (385)
362 4e4u_A Mandalate racemase/muco 89.7 3.2 0.00011 40.5 12.4 130 133-306 143-282 (412)
363 3ih1_A Methylisocitrate lyase; 89.7 1.6 5.6E-05 41.0 9.8 68 234-312 179-249 (305)
364 1o60_A 2-dehydro-3-deoxyphosph 89.7 7.4 0.00025 36.2 14.2 87 221-309 131-242 (292)
365 3b0p_A TRNA-dihydrouridine syn 89.5 2.9 0.0001 39.8 11.6 90 122-249 126-224 (350)
366 4aaj_A N-(5'-phosphoribosyl)an 89.4 6.9 0.00023 35.0 13.4 84 215-309 108-205 (228)
367 3rr1_A GALD, putative D-galact 89.2 3.3 0.00011 40.4 11.9 128 132-307 123-260 (405)
368 3eoo_A Methylisocitrate lyase; 89.2 2.8 9.5E-05 39.2 10.9 83 222-306 21-118 (298)
369 2wqp_A Polysialic acid capsule 89.1 5.9 0.0002 37.8 13.3 77 218-305 100-180 (349)
370 3bjs_A Mandelate racemase/muco 89.1 1.8 6.3E-05 42.4 10.1 117 133-306 183-311 (428)
371 1ofd_A Ferredoxin-dependent gl 88.9 4.6 0.00016 45.7 13.9 120 234-353 585-732 (1520)
372 3tj4_A Mandelate racemase; eno 88.7 4.3 0.00015 38.9 12.2 81 216-306 189-278 (372)
373 3ih1_A Methylisocitrate lyase; 88.6 3.1 0.0001 39.1 10.8 82 222-306 28-124 (305)
374 1tqj_A Ribulose-phosphate 3-ep 88.6 1.8 6.1E-05 38.8 8.9 86 215-307 55-142 (230)
375 1f76_A Dihydroorotate dehydrog 88.5 2.1 7E-05 40.4 9.7 100 123-249 212-317 (336)
376 3qfe_A Putative dihydrodipicol 88.3 17 0.00057 34.1 17.9 181 73-308 16-222 (318)
377 3ro6_B Putative chloromuconate 88.3 2.6 8.9E-05 40.2 10.4 122 132-309 138-269 (356)
378 2gl5_A Putative dehydratase pr 88.2 5.2 0.00018 38.7 12.7 81 216-306 210-299 (410)
379 2hjp_A Phosphonopyruvate hydro 88.2 3.7 0.00012 38.3 11.0 84 222-305 14-109 (290)
380 1rd5_A Tryptophan synthase alp 88.2 14 0.00048 33.2 15.1 83 216-307 88-174 (262)
381 4ef8_A Dihydroorotate dehydrog 87.9 2.1 7.1E-05 41.1 9.4 107 121-249 192-305 (354)
382 3toy_A Mandelate racemase/muco 87.9 6 0.00021 38.1 12.8 82 216-307 205-295 (383)
383 2gjl_A Hypothetical protein PA 87.9 2.2 7.4E-05 40.1 9.4 76 216-305 61-144 (328)
384 3gr7_A NADPH dehydrogenase; fl 87.8 5.6 0.00019 37.7 12.3 87 122-249 209-306 (340)
385 2wkj_A N-acetylneuraminate lya 87.8 17 0.00059 33.7 22.3 181 73-311 17-220 (303)
386 3ugv_A Enolase; enzyme functio 87.8 7.5 0.00026 37.5 13.4 84 216-309 211-303 (390)
387 3b8i_A PA4872 oxaloacetate dec 87.7 2.8 9.7E-05 39.0 9.8 85 222-306 20-117 (287)
388 1h1y_A D-ribulose-5-phosphate 87.7 3.6 0.00012 36.5 10.3 83 216-307 58-146 (228)
389 2hxt_A L-fuconate dehydratase; 87.6 4.3 0.00015 39.8 11.7 117 134-306 198-324 (441)
390 3r4e_A Mandelate racemase/muco 87.5 4.6 0.00016 39.4 11.8 152 132-307 141-302 (418)
391 1zlp_A PSR132, petal death pro 87.3 2.6 8.8E-05 39.8 9.4 68 234-312 193-263 (318)
392 1vhn_A Putative flavin oxidore 87.3 3.3 0.00011 38.8 10.2 32 216-249 179-212 (318)
393 2o56_A Putative mandelate race 87.3 6.2 0.00021 38.1 12.5 81 216-306 207-296 (407)
394 3dg3_A Muconate cycloisomerase 87.2 8.1 0.00028 36.8 13.2 85 216-310 177-270 (367)
395 1zlp_A PSR132, petal death pro 87.1 5.6 0.00019 37.5 11.6 83 222-305 38-135 (318)
396 1vyr_A Pentaerythritol tetrani 87.1 4.8 0.00016 38.6 11.4 34 216-249 288-322 (364)
397 3sbf_A Mandelate racemase / mu 87.1 5.4 0.00019 38.6 12.0 143 132-307 131-283 (401)
398 1xg4_A Probable methylisocitra 87.1 2.2 7.6E-05 39.8 8.8 82 222-305 16-113 (295)
399 1w3i_A EDA, 2-keto-3-deoxy glu 87.1 18 0.00063 33.2 21.7 175 73-308 5-199 (293)
400 3ngj_A Deoxyribose-phosphate a 87.0 6.4 0.00022 35.5 11.5 75 234-309 99-180 (239)
401 1yad_A Regulatory protein TENI 86.8 8 0.00027 33.7 12.0 35 216-250 158-192 (221)
402 3kts_A Glycerol uptake operon 86.7 0.54 1.8E-05 41.3 4.0 38 215-252 143-181 (192)
403 3fs2_A 2-dehydro-3-deoxyphosph 86.7 1.4 4.7E-05 41.3 7.0 86 220-309 153-263 (298)
404 1me8_A Inosine-5'-monophosphat 86.5 1.2 4.1E-05 44.7 7.1 70 233-307 244-313 (503)
405 2ox4_A Putative mandelate race 86.4 5.2 0.00018 38.6 11.4 82 216-307 201-291 (403)
406 1ujp_A Tryptophan synthase alp 86.4 0.94 3.2E-05 41.8 5.7 34 215-250 195-229 (271)
407 1sjd_A N-acylamino acid racema 86.3 5.8 0.0002 37.7 11.6 116 133-306 140-263 (368)
408 1w3i_A EDA, 2-keto-3-deoxy glu 86.3 2.1 7.3E-05 39.7 8.3 84 236-328 26-118 (293)
409 3ddm_A Putative mandelate race 86.3 4.6 0.00016 39.0 11.0 81 216-306 191-281 (392)
410 3sr7_A Isopentenyl-diphosphate 86.3 1.5 5.1E-05 42.3 7.3 82 222-306 144-237 (365)
411 1rpx_A Protein (ribulose-phosp 86.2 6.1 0.00021 34.8 11.0 130 128-307 15-148 (230)
412 2e6f_A Dihydroorotate dehydrog 86.2 1.7 5.9E-05 40.4 7.6 105 122-249 160-272 (314)
413 1tv5_A Dhodehase, dihydroorota 86.2 4 0.00014 40.4 10.5 97 124-249 298-401 (443)
414 3fa4_A 2,3-dimethylmalate lyas 86.2 4.9 0.00017 37.6 10.6 84 222-306 17-115 (302)
415 3tji_A Mandelate racemase/muco 86.2 7.3 0.00025 38.1 12.4 143 132-307 152-304 (422)
416 3oa3_A Aldolase; structural ge 86.1 6.5 0.00022 36.5 11.3 75 234-309 130-211 (288)
417 3q45_A Mandelate racemase/muco 86.1 8.3 0.00028 36.8 12.6 119 132-307 138-266 (368)
418 1f6k_A N-acetylneuraminate lya 85.9 21 0.00072 32.8 22.9 181 73-311 9-212 (293)
419 1p0k_A Isopentenyl-diphosphate 85.9 4.3 0.00015 38.4 10.3 84 221-306 115-209 (349)
420 3ajx_A 3-hexulose-6-phosphate 85.9 7.5 0.00026 33.4 11.2 82 215-306 45-134 (207)
421 3hgj_A Chromate reductase; TIM 85.8 9.9 0.00034 36.0 12.9 86 124-249 221-317 (349)
422 3eoo_A Methylisocitrate lyase; 85.7 4.4 0.00015 37.9 10.0 68 234-312 175-245 (298)
423 2zad_A Muconate cycloisomerase 85.7 23 0.0008 33.1 16.3 117 133-305 138-264 (345)
424 1wa3_A 2-keto-3-deoxy-6-phosph 85.6 5.6 0.00019 34.2 10.2 64 235-307 27-90 (205)
425 3tml_A 2-dehydro-3-deoxyphosph 85.5 1.9 6.4E-05 40.2 7.3 86 220-309 129-245 (288)
426 3mqt_A Mandelate racemase/muco 85.5 5.6 0.00019 38.4 11.1 82 216-307 192-283 (394)
427 3f4w_A Putative hexulose 6 pho 85.4 9 0.00031 33.0 11.5 83 215-306 45-134 (211)
428 1mzh_A Deoxyribose-phosphate a 85.4 8.3 0.00028 34.2 11.4 79 124-250 117-204 (225)
429 4aaj_A N-(5'-phosphoribosyl)an 85.4 6.3 0.00021 35.3 10.5 77 224-306 20-99 (228)
430 1m3u_A 3-methyl-2-oxobutanoate 85.3 12 0.0004 34.4 12.4 80 216-306 71-181 (264)
431 1s2w_A Phosphoenolpyruvate pho 85.3 2.5 8.5E-05 39.5 8.1 83 222-306 18-114 (295)
432 2nuw_A 2-keto-3-deoxygluconate 85.3 2.3 7.8E-05 39.4 7.9 85 236-328 26-118 (288)
433 1xi3_A Thiamine phosphate pyro 85.2 7.9 0.00027 33.3 11.1 35 216-250 156-190 (215)
434 2gou_A Oxidoreductase, FMN-bin 85.2 4.7 0.00016 38.6 10.3 34 216-249 287-321 (365)
435 3g8r_A Probable spore coat pol 85.1 7.3 0.00025 37.2 11.4 75 219-305 88-166 (350)
436 2qq6_A Mandelate racemase/muco 85.0 8.1 0.00028 37.4 12.1 81 216-306 202-291 (410)
437 3bo9_A Putative nitroalkan dio 85.0 2.7 9.3E-05 39.6 8.4 76 216-305 71-150 (326)
438 3tha_A Tryptophan synthase alp 84.9 3.9 0.00013 37.3 9.0 35 215-250 192-227 (252)
439 1chr_A Chloromuconate cycloiso 84.8 7.2 0.00025 37.2 11.4 82 216-307 180-270 (370)
440 3vcn_A Mannonate dehydratase; 84.7 5.6 0.00019 38.9 10.8 83 215-307 218-309 (425)
441 2z6i_A Trans-2-enoyl-ACP reduc 84.7 3.6 0.00012 38.8 9.1 76 216-305 57-136 (332)
442 4a29_A Engineered retro-aldol 84.6 3.2 0.00011 38.0 8.2 69 232-306 65-133 (258)
443 3l5l_A Xenobiotic reductase A; 84.3 7.6 0.00026 37.1 11.3 86 124-249 227-324 (363)
444 3my9_A Muconate cycloisomerase 84.3 7.8 0.00027 37.1 11.4 82 216-307 183-273 (377)
445 3mkc_A Racemase; metabolic pro 84.3 7.5 0.00026 37.5 11.4 82 216-307 197-288 (394)
446 3i65_A Dihydroorotate dehydrog 84.3 3 0.0001 40.9 8.4 98 123-249 269-373 (415)
447 3lye_A Oxaloacetate acetyl hyd 84.2 3 0.0001 39.2 8.1 67 236-312 184-253 (307)
448 3mwc_A Mandelate racemase/muco 84.0 13 0.00044 35.9 12.9 82 216-307 197-286 (400)
449 2hjp_A Phosphonopyruvate hydro 83.9 3.3 0.00011 38.6 8.2 71 234-312 170-241 (290)
450 2ze3_A DFA0005; organic waste 83.9 5.5 0.00019 36.7 9.7 64 235-312 173-238 (275)
451 3go2_A Putative L-alanine-DL-g 83.7 7.1 0.00024 37.9 11.0 80 216-307 205-293 (409)
452 3v3w_A Starvation sensing prot 83.7 10 0.00036 36.9 12.2 82 216-307 218-308 (424)
453 3lye_A Oxaloacetate acetyl hyd 83.0 5.9 0.0002 37.2 9.6 85 222-306 24-123 (307)
454 1gox_A (S)-2-hydroxy-acid oxid 82.9 5.7 0.00019 38.1 9.8 42 263-307 213-254 (370)
455 3o63_A Probable thiamine-phosp 82.6 11 0.00039 33.8 11.1 35 216-250 183-219 (243)
456 3hjz_A Transaldolase B; parach 82.2 3.4 0.00012 39.3 7.7 91 221-314 153-257 (334)
457 2zc8_A N-acylamino acid racema 82.1 14 0.00047 35.0 12.2 81 216-306 175-262 (369)
458 2qiw_A PEP phosphonomutase; st 82.1 7.5 0.00025 35.4 9.8 83 222-306 19-113 (255)
459 1r0m_A N-acylamino acid racema 82.1 13 0.00044 35.4 12.0 81 216-306 182-269 (375)
460 2fli_A Ribulose-phosphate 3-ep 81.9 2.8 9.6E-05 36.6 6.7 70 233-307 19-92 (220)
461 3e96_A Dihydrodipicolinate syn 81.9 33 0.0011 31.9 19.2 180 73-308 17-216 (316)
462 1f8m_A Isocitrate lyase, ICL; 81.6 10 0.00035 37.1 11.1 86 222-307 64-184 (429)
463 2pcq_A Putative dihydrodipicol 81.6 2.4 8.2E-05 39.2 6.3 89 236-330 25-117 (283)
464 2cu0_A Inosine-5'-monophosphat 81.5 1.7 5.8E-05 43.3 5.6 65 233-306 230-294 (486)
465 1m3u_A 3-methyl-2-oxobutanoate 81.5 9 0.00031 35.1 10.0 83 222-305 16-113 (264)
466 1o66_A 3-methyl-2-oxobutanoate 81.5 10 0.00035 34.9 10.4 83 222-305 16-114 (275)
467 3noy_A 4-hydroxy-3-methylbut-2 81.4 15 0.00053 35.0 11.8 84 232-331 48-132 (366)
468 3sgz_A Hydroxyacid oxidase 2; 81.3 4.7 0.00016 38.6 8.4 42 262-306 204-245 (352)
469 3gd6_A Muconate cycloisomerase 80.9 15 0.00052 35.2 12.1 119 133-309 141-271 (391)
470 3bw2_A 2-nitropropane dioxygen 80.8 7.5 0.00026 37.0 9.8 60 233-305 112-171 (369)
471 3vkj_A Isopentenyl-diphosphate 80.7 4.2 0.00014 39.1 7.9 88 217-306 113-218 (368)
472 2ze3_A DFA0005; organic waste 80.6 8.7 0.0003 35.4 9.7 79 225-305 18-111 (275)
473 2qkf_A 3-deoxy-D-manno-octulos 80.5 5.2 0.00018 37.0 8.2 89 220-310 127-240 (280)
474 1v5x_A PRA isomerase, phosphor 80.1 14 0.00047 32.3 10.5 78 226-306 2-82 (203)
475 2tps_A Protein (thiamin phosph 79.7 4.2 0.00014 35.6 7.1 66 234-307 35-102 (227)
476 1nsj_A PRAI, phosphoribosyl an 79.4 14 0.00048 32.3 10.3 78 226-306 3-83 (205)
477 2yzr_A Pyridoxal biosynthesis 79.4 6.4 0.00022 37.2 8.4 81 219-305 14-102 (330)
478 1ep3_A Dihydroorotate dehydrog 79.3 7.3 0.00025 35.8 8.9 34 216-249 235-269 (311)
479 3i6e_A Muconate cycloisomerase 79.1 17 0.00059 34.8 11.8 83 216-308 185-275 (385)
480 3oix_A Putative dihydroorotate 78.9 5.9 0.0002 37.8 8.2 34 216-249 267-303 (345)
481 3qw3_A Orotidine-5-phosphate d 78.9 3.5 0.00012 37.6 6.4 77 241-335 168-251 (255)
482 3fa4_A 2,3-dimethylmalate lyas 78.8 4.9 0.00017 37.6 7.4 67 236-312 176-245 (302)
483 2htm_A Thiazole biosynthesis p 78.7 3.7 0.00013 37.7 6.4 36 215-250 169-207 (268)
484 2p10_A MLL9387 protein; putati 78.7 4.1 0.00014 37.7 6.7 91 216-308 19-129 (286)
485 2nuw_A 2-keto-3-deoxygluconate 78.4 40 0.0014 30.8 21.0 173 73-308 5-197 (288)
486 3r0u_A Enzyme of enolase super 78.3 36 0.0012 32.5 13.8 84 216-309 178-272 (379)
487 3b8i_A PA4872 oxaloacetate dec 78.1 3.8 0.00013 38.1 6.4 69 234-313 172-241 (287)
488 3tkf_A Transaldolase; structur 77.9 8.5 0.00029 36.7 8.9 91 222-315 177-282 (345)
489 3qz6_A HPCH/HPAI aldolase; str 77.4 7.1 0.00024 35.6 8.0 75 226-307 20-96 (261)
490 1tx2_A DHPS, dihydropteroate s 77.0 8.8 0.0003 35.8 8.6 69 235-307 68-143 (297)
491 1w8s_A FBP aldolase, fructose- 76.6 12 0.0004 34.1 9.3 73 234-308 96-181 (263)
492 2nli_A Lactate oxidase; flavoe 76.5 7.3 0.00025 37.4 8.2 41 263-306 217-257 (368)
493 3t6c_A RSPA, putative MAND fam 76.4 23 0.00079 34.6 12.0 82 216-307 232-322 (440)
494 4ab4_A Xenobiotic reductase B; 76.1 19 0.00065 34.4 11.0 34 216-249 273-307 (362)
495 2r14_A Morphinone reductase; H 76.1 11 0.00037 36.3 9.3 34 216-249 293-327 (377)
496 1ub3_A Aldolase protein; schif 76.1 14 0.00047 32.8 9.3 74 234-307 75-154 (220)
497 2i1o_A Nicotinate phosphoribos 75.7 9.4 0.00032 37.1 8.8 73 233-310 224-302 (398)
498 3fok_A Uncharacterized protein 75.6 3.6 0.00012 38.5 5.5 63 235-311 205-278 (307)
499 3jr2_A Hexulose-6-phosphate sy 75.4 23 0.00078 30.8 10.6 83 215-306 51-139 (218)
500 3elf_A Fructose-bisphosphate a 75.2 41 0.0014 31.9 12.9 113 231-343 182-339 (349)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=6.2e-81 Score=606.38 Aligned_cols=343 Identities=46% Similarity=0.746 Sum_probs=317.2
Q ss_pred CCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccchh
Q 017718 4 ITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQK 83 (367)
Q Consensus 4 ~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~~ 83 (367)
++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|+|++++||+|++||+++++||++||+++++
T Consensus 2 ~~~~~d~~~~A~~~lp~~~~~Y~~~ga~~e~t~~~N~~af~~~~l~prvl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~ 81 (352)
T 3sgz_A 2 LVCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHS 81 (352)
T ss_dssp CCSHHHHHHHHHHTSCHHHHHHHHCCCTTCHHHHHHHHHHHTCCBCCCCSSCCSSCBCCEEETTEEESSSEEECCCSCGG
T ss_pred CCCHHHHHHHHHHHCCHHHHHHHhcCCcchHHHHHHHHHHHhceeeccccCCCCCCCCceEECCcccCCcceechHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017718 84 MAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (367)
Q Consensus 84 l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~ 162 (367)
+.||++|.+++++|+++|+++++|+++++++|||.+..+ ++.|||||+.+|++.++++++||+++||++|++|||+|+.
T Consensus 82 l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~ 161 (352)
T 3sgz_A 82 IAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVL 161 (352)
T ss_dssp GTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSC
T ss_pred hcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999877 7899999999999999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCCHHHHHHH
Q 017718 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLTAEDARIA 239 (367)
Q Consensus 163 g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~~~~a~~~ 239 (367)
|+|++|+|++|.+|++++.+|+.+... ....++.. ....|+.++|+ ++|+.+++||++|++.+.++|+.+
T Consensus 162 g~R~~d~r~~~~~p~~~~~~~~~~~~~----~~~~~~~~---~~~~d~~~~w~~i~~lr~~~~~PvivK~v~~~e~A~~a 234 (352)
T 3sgz_A 162 GNRRRDKRNQLNLEANILKAALRALKE----EKPTQSVP---VLFPKASFCWNDLSLLQSITRLPIILKGILTKEDAELA 234 (352)
T ss_dssp CCCHHHHHHHHHSCHHHHTTCC----------------------CCCTTCCHHHHHHHHHHCCSCEEEEEECSHHHHHHH
T ss_pred CcchhhhhcCCCCCcccchhhhccccc----ccccchhh---hhccCCCCCHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 999999999999998777766543210 00011111 14467888997 899999999999999999999999
Q ss_pred HHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChH
Q 017718 240 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 240 ~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~ 319 (367)
.++|+|+|+|+||||+++++++++++.|+++++.+++++|||++|||+++.|++|+|++|||+|+|||+|+|++++.|++
T Consensus 235 ~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~l~~l~~~G~~ 314 (352)
T 3sgz_A 235 MKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGED 314 (352)
T ss_dssp HHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcCcH
Confidence 99999999999999999999999999999999988778999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhhhccccee
Q 017718 320 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 353 (367)
Q Consensus 320 ~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~ 353 (367)
++.++++.+++||+.+|.++|+++++|++++.++
T Consensus 315 gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~~~ 348 (352)
T 3sgz_A 315 GVKEVLDILTAELHRCMTLSGCQSVAEISPDLIQ 348 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhcch
Confidence 9999999999999999999999999999998875
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=1.3e-73 Score=565.79 Aligned_cols=353 Identities=57% Similarity=0.928 Sum_probs=317.4
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccch
Q 017718 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (367)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~ 82 (367)
.++|++|||+.||++||+.+|+|+.||++||.|+++|+++|++|+|+||+|++++++||+|+|||+++++||++||||++
T Consensus 26 ~~~~~~d~~~~A~~~lp~~~~~y~~~ga~~e~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~ 105 (392)
T 2nzl_A 26 RLICINDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQ 105 (392)
T ss_dssp CCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHHHHHSCBCCCCSSCCTTCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHhhCCHHHHhhcCCCCCccHHHHHHHHhhheEEeehhhccCCcCCCcceEECCEecCCceEecccccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCC
Q 017718 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (367)
Q Consensus 83 ~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~ 161 (367)
.+.||++|.+++++|+++|+++++|+++++++|++.+..+ .+.|||||.++|++.+.++++|++++|++++++|+|||+
T Consensus 106 ~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~ 185 (392)
T 2nzl_A 106 RMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPY 185 (392)
T ss_dssp GGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSS
T ss_pred ccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 9999999999999999999999999999999999987654 789999999999999999999999999999999999999
Q ss_pred CCchhHHhhhhcCCCCccccccccccccC-cc-cc-ccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCCHHH
Q 017718 162 LGRREADIKNRFTLPPFLTLKNFQGLDLG-KM-DE-ANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLTAED 235 (367)
Q Consensus 162 ~g~r~~~~~~~~~~p~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~~~~ 235 (367)
.|+|++|+|++|.+|++++.+|+...... .. .. ..+.....++...++++++|+ ++++.+++||++|++.+.++
T Consensus 186 ~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~~e~ 265 (392)
T 2nzl_A 186 LGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGILRGDD 265 (392)
T ss_dssp CCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEECCHHH
T ss_pred ccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEecCCHHH
Confidence 99999999999999987766654211000 00 00 111223356666678888886 88888999999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhc
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~ 315 (367)
|+.+.++|+|+|+|+||||++.++++++++.|+++++.+++++|||++|||+++.|++|+|++|||+|++||||++++.+
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~l~~~~~ 345 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAF 345 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHHHHHHHh
Confidence 99999999999999999999999999999999999998877899999999999999999999999999999999999988
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeec
Q 017718 316 EGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 355 (367)
Q Consensus 316 ~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~ 355 (367)
.|++++.++++.+++||+.+|.++|++++.|+++..|...
T Consensus 346 ~g~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~ 385 (392)
T 2nzl_A 346 QGEKGVQDVLEILKEEFRLAMALSGCQNVKVIDKTLVRKN 385 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSBGGGCCGGGBC--
T ss_pred cChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhC
Confidence 8999999999999999999999999999999999988653
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=7.7e-73 Score=556.56 Aligned_cols=349 Identities=35% Similarity=0.565 Sum_probs=304.3
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccc
Q 017718 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (367)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~ 81 (367)
..++|++|||+.||++||+.+|+|+.||++||.|+++|+.+|++|+|+||+|++++++||+|+|+|+++++||++|||++
T Consensus 11 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pi~iAPma~ 90 (368)
T 2nli_A 11 IDVVNTYDLEEEASKVVPHGGFNYIAGASGDEWTKRANDRAWKHKLLYPRLAQDVEAPDTSTEILGHKIKAPFIMAPIAA 90 (368)
T ss_dssp CCCSCSHHHHHHHHTTSCHHHHHHHHCCSBTSHHHHHHHHGGGGEEECCCCCCCCSCCCCCEEETTEEESSSEEECCCSC
T ss_pred ccCCCHHHHHHHHHHhCCHHHHhhcccCCCccHHHHHHHHHHhheeeeccccCCCccCCcceEECCEecCCceeecchhh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhC-CCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCC
Q 017718 82 QKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (367)
Q Consensus 82 ~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~-~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p 160 (367)
+++.||++|.+++++|+++|+++++|++++.++|++.+.. ..+.|||||.++|++.+.++++|++++|+++++||+|||
T Consensus 91 ~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p 170 (368)
T 2nli_A 91 HGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADST 170 (368)
T ss_dssp GGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC
T ss_pred ccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 9999999999999999999999999999989999997754 378999999999999999999999999999999999999
Q ss_pred CCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCCHHHHH
Q 017718 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLTAEDAR 237 (367)
Q Consensus 161 ~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~~~~a~ 237 (367)
+.|+|++|++++|.+| ++.+++...... ...+..+ ++++.+.++.++|+ ++|+.+++||++|++.+.++|+
T Consensus 171 ~~g~r~~d~~~~~~~p--~~~~~~~~~~~~---~~~g~~l-~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v~~~e~a~ 244 (368)
T 2nli_A 171 VSGNRDRDVKNKFVYP--FGMPIVQRYLRG---TAEGMSL-NNIYGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDAD 244 (368)
T ss_dssp ---CBC--------CC--SCCHHHHHHHTT---SGGGC------CTTBCSBCCHHHHHHHHHHSSSCEEEEEECSHHHHH
T ss_pred cccchhHHHhhcccCc--chhhhhhccccc---CCCCchH-HhhhhccCchhhHHHHHHHHHHcCCCEEEEcCCCHHHHH
Confidence 9999999999999877 222232100000 0011122 34455567888886 8999999999999999999999
Q ss_pred HHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccC
Q 017718 238 IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEG 317 (367)
Q Consensus 238 ~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G 317 (367)
.+.++|+|+|+|+||||+++++++++++.|+++++.+++++|||++|||+++.|++|+|++|||+|+|||||++++++.|
T Consensus 245 ~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~l~~~~~~G 324 (368)
T 2nli_A 245 MAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGG 324 (368)
T ss_dssp HHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcC
Confidence 99999999999999999999999999999999999887789999999999999999999999999999999999998889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeecc
Q 017718 318 EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEW 356 (367)
Q Consensus 318 ~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~~ 356 (367)
++|+.++++.+++||+.+|.++|++++.|+++..+....
T Consensus 325 ~~gv~~~l~~l~~el~~~m~~~G~~~i~~l~~~~l~~~~ 363 (368)
T 2nli_A 325 WQGAYSVLDYFQKDLTRVMQLTGSQNVEDLKGLDLFDNP 363 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHTCCEEECT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcCHHHhccccEeecc
Confidence 999999999999999999999999999999999987654
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=7.6e-71 Score=543.47 Aligned_cols=364 Identities=89% Similarity=1.335 Sum_probs=322.4
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccch
Q 017718 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (367)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~ 82 (367)
+++|++|||+.||++||+.+|+|++||++||.|+++|+++|++|+|+||+|++++++||+|+|||+++++||++|||+++
T Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~N~~~f~~i~l~pr~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~ 82 (370)
T 1gox_A 3 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQ 82 (370)
T ss_dssp CCCSTTHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSCCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHhhhCCCCCccHHHHHHHHHHhhheeeccccCCCCCCCCceEECCcccCCceeEcccchh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017718 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (367)
Q Consensus 83 ~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~ 162 (367)
.+.||++|.+++++|+++|+++++|++++.++|++.+..+++.|||||+++|++.+.+++++++++|+++++||+|||+.
T Consensus 83 ~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~ 162 (370)
T 1gox_A 83 KMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (370)
T ss_dssp GGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred hhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999999999999887678899999999999999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCCHHHHHHH
Q 017718 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLTAEDARIA 239 (367)
Q Consensus 163 g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~~~~a~~~ 239 (367)
|+|++|+++++.+|.++..+++............++....+++...++.++|+ ++++.+++||++|++.++++++.+
T Consensus 163 g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~~~e~a~~a 242 (370)
T 1gox_A 163 GRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKGVITAEDARLA 242 (370)
T ss_dssp CCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCCSHHHHHHH
T ss_pred cccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEEEecCCHHHHHHH
Confidence 99999999999888776555543211000001122233345666668888886 888889999999999999999999
Q ss_pred HHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChH
Q 017718 240 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 240 ~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~ 319 (367)
.++|+|+|+|+||||+++++++++++.|+++++.+++++|||++|||++++|+.|++++|||+|+|||+|++++.+.|++
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~l~~~~~~G~~ 322 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEA 322 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHHHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHHHHHHhhccHH
Confidence 99999999999999999999999999999999988778999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccCCCCCCCCCC
Q 017718 320 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDASLPRPVPR 366 (367)
Q Consensus 320 ~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~~~~~~~~~~~~ 366 (367)
++.++++.+++||+.+|.++|++++.|++++.+.....+.....+.+
T Consensus 323 gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~~~~~~~~~ 369 (370)
T 1gox_A 323 GVKKVLQMMRDEFELTMALSGCRSLKEISRSHIAADWDGPSSRAVAR 369 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSBTTTCCGGGEEETTC---------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhhhcceeccccccccchhhc
Confidence 99999999999999999999999999999999987766655555544
No 5
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=4e-69 Score=549.72 Aligned_cols=351 Identities=40% Similarity=0.678 Sum_probs=314.4
Q ss_pred CCCCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccc
Q 017718 2 GEITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAM 81 (367)
Q Consensus 2 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~ 81 (367)
..++|++|||+.||++||+.+|+|+.||+++|.|+++|+++|++|+|+||+|++++++||+|+|||+++++||+||||++
T Consensus 120 ~~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~e~t~~~N~~af~~i~l~pr~L~dv~~~d~st~i~G~~l~~Pi~iAPma~ 199 (511)
T 1kbi_A 120 DNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATAL 199 (511)
T ss_dssp GGCCSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGCEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSC
T ss_pred cccCCHHHHHHHHHhhCCHHHhhhccCCCCchhHHHHHHHHhhhhccccccccCcccccCccccCCccCCCCeEeccchh
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCC-hhhHHHHHHHHH--cCCceeecCCCCCCHHHHHhhC---CCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEE
Q 017718 82 QKMAHP-EGEYATARAASA--AGTIMTLSSWSTSSVEEVASTG---PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (367)
Q Consensus 82 ~~l~~~-~~e~~~a~aa~~--~G~~~~vs~~~~~~~e~i~~~~---~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~i 155 (367)
+++.|| ++|.+++++|++ +|+++++|++++.++|++.+.. .++.|||||+++|++.+.+++++++++|+++|+|
T Consensus 200 ~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~i 279 (511)
T 1kbi_A 200 CKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFV 279 (511)
T ss_dssp GGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEE
T ss_pred ccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 999999 999999999999 9999999999999999998765 2789999999999999999999999999999999
Q ss_pred ecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCC
Q 017718 156 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLT 232 (367)
Q Consensus 156 tvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~ 232 (367)
|+|||+.|+|+++++++|..|.... ..+.+. .. ....+...++....++.++|+ ++|+.+++||++|++.+
T Consensus 280 tvd~p~~g~R~~~~r~g~~~p~~~~-~~~~g~---~~--~~~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~~ 353 (511)
T 1kbi_A 280 TVDAPSLGQREKDMKLKFSNTKAGP-KAMKKT---NV--EESQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQR 353 (511)
T ss_dssp ECSCSSCCCCHHHHHHHHTTCC--------CC---CC--SSCCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEECS
T ss_pred eCCCCCccccHHHHhccCCCCcccc-cccccc---cc--cccccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCCC
Confidence 9999999999999999998774211 100000 00 011122334444457788886 89999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh-----cCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.++|+.+.++|+|+|+|+||||++++.++++++.|+++++.+ .+++|||++|||+++.|++|+|++|||+|+|||
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 999999999999999999999999999999999999999887 348999999999999999999999999999999
Q ss_pred HHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccCC
Q 017718 308 PVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWDA 358 (367)
Q Consensus 308 ~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~~~~ 358 (367)
||++++.+.|++++.++++.+++||+.+|.++|++++.||+++.+......
T Consensus 434 ~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~~i~el~~~~l~~~~~~ 484 (511)
T 1kbi_A 434 PFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKPDLLDLSTLK 484 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEECTTTT
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCCcHHHHhHHHhhhhhhh
Confidence 999999888999999999999999999999999999999999988765443
No 6
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=5.6e-68 Score=524.45 Aligned_cols=352 Identities=43% Similarity=0.745 Sum_probs=313.4
Q ss_pred CCCChHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCCCCCCccceeEcCeeeccceEeCcccch
Q 017718 3 EITNVMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQ 82 (367)
Q Consensus 3 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~ 82 (367)
+++|++|||+.||++||+.+|+|++||++||.|+++|+.+|++|+|+||+|+|++++||+|+|+|+++++||++|||+++
T Consensus 4 ~~~~~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~f~~i~l~pr~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~ 83 (380)
T 1p4c_A 4 NLFNVEDYRKLAQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLN 83 (380)
T ss_dssp CCSSHHHHHHHHHHHSCHHHHHHHHCCSTTCHHHHHHHHGGGGEEECCCCSCCCSSCBCCEEETTEEESSSEEECCCSCG
T ss_pred cCCCHHHHHHHHHHhCCHHHHHHhCCCCCccHHHHHHHHHHhheeeeccccCCCccCcceeEECCeecCCceEecCcccc
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017718 83 KMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (367)
Q Consensus 83 ~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~ 162 (367)
++.||++|.+++++|+++|+++++|+++++++|++.....++.|||||+.+ ++...+++++|+++|+++++||+|.|+.
T Consensus 84 ~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~~~~~~~fQly~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~ 162 (380)
T 1p4c_A 84 GALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVN 162 (380)
T ss_dssp GGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHCCSCEEEEECCSS-HHHHHHHHHHHHHTTCCEEEEECSCSSC
T ss_pred ccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhccCCCeEEEEEech-HHHHHHHHHHHHHcCCCEEEEeecCccc
Confidence 999999999999999999999999999999999998764578999999888 9999999999999999999999999999
Q ss_pred CchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCCHHHHHHH
Q 017718 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLTAEDARIA 239 (367)
Q Consensus 163 g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~~~~a~~~ 239 (367)
|+|++|+++++..|..+...++..............++..++....+++++|+ ++++.+++||++|++.+.++|+.+
T Consensus 163 g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a 242 (380)
T 1p4c_A 163 GYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRC 242 (380)
T ss_dssp CCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEECCHHHHHHH
T ss_pred cchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccccHHHHHHHHHhcCCCEEEEecCcHHHHHHH
Confidence 99999999999877654444321000000100111223333444457788886 888989999999999999999999
Q ss_pred HHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChH
Q 017718 240 VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 240 ~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~ 319 (367)
.++|+|+|+|+||||+++++++++++.++++++.+ +.|||++|||+++.|+.|+|++|||+|++||++++++.+.|++
T Consensus 243 ~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~l~~~~~~g~~ 320 (380)
T 1p4c_A 243 IAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GKPVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGET 320 (380)
T ss_dssp HHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999888 5699999999999999999999999999999999998778999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeeccC
Q 017718 320 GVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTEWD 357 (367)
Q Consensus 320 ~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~~~ 357 (367)
++.++++.+++||+.+|.++|++++.|++++.++..+.
T Consensus 321 ~v~~~~~~l~~el~~~m~~~G~~~i~el~~~~l~~~g~ 358 (380)
T 1p4c_A 321 GVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEGV 358 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBGGGCCGGGEEEC--
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHhccCeEEeccc
Confidence 99999999999999999999999999999999876543
No 7
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=100.00 E-value=7.1e-44 Score=348.84 Aligned_cols=270 Identities=19% Similarity=0.305 Sum_probs=212.1
Q ss_pred hccccceeeccccC--CCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHH--
Q 017718 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE-- 116 (367)
Q Consensus 41 ~~~~~i~l~pr~l~--~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~-- 116 (367)
+.||+|+|+|+.|+ +++++||+|+|+|+++++||++|||++++..++++|.+++++|+++|+++++|+++.. +|+
T Consensus 54 ~~fd~i~l~~~~lP~~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~-le~~~ 132 (365)
T 3sr7_A 54 NSFDDIELIHHSLPDYDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTA-LKNPD 132 (365)
T ss_dssp CGGGGEEECCCSSCCSCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------
T ss_pred CCcceEEEECCCCCcCCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeeccccccc-ccCcc
Confidence 58999999999995 7789999999999999999999999999988889999999999999999999998642 222
Q ss_pred -----HHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccC
Q 017718 117 -----VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (367)
Q Consensus 117 -----i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~ 190 (367)
+.+..| .+.+-.|-..... ++..+.++..|++++.+|++..
T Consensus 133 ~~~~~v~r~~P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~------------------------------ 179 (365)
T 3sr7_A 133 DTSYQVKKSRPHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLM------------------------------ 179 (365)
T ss_dssp ------------CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHH------------------------------
T ss_pred ccceEehhhCCCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEecccc------------------------------
Confidence 222223 3344444322222 3456667789999999999832
Q ss_pred ccccccchhhHHHhhhccCccc-cHH----HHHhhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEcCCCCCCC-----
Q 017718 191 KMDEANDSGLAAYVAGQIDRSL-SWK----WLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQL----- 257 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~d~~~-~~~----~l~~~~~~Pv~vK~v---~~~~~a~~~~~~G~d~i~vs~~gg~~~----- 257 (367)
++.+++..++++ +|. ++++.+++||++|++ .++++|+.+.++|+|+|+|+||||+++
T Consensus 180 ----------qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~ 249 (365)
T 3sr7_A 180 ----------QELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLGVKTVDISGRGGTSFAYIEN 249 (365)
T ss_dssp ----------HHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHTCCEEECCCBC---------
T ss_pred ----------ccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcCCCEEEEeCCCCcccchhhc
Confidence 112222335555 562 888889999999998 799999999999999999999999864
Q ss_pred ----------CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHH
Q 017718 258 ----------DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 258 ----------~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~ 327 (367)
+++.++.+.|+++. .+.+++|||++|||+++.|++|+|++|||+|++||+|++++.+.|++++.++++.
T Consensus 250 ~r~~~~~~~~~~g~pt~~~L~~v~-~~~~~ipvia~GGI~~g~Dv~KaLalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~ 328 (365)
T 3sr7_A 250 RRGGNRSYLNQWGQTTAQVLLNAQ-PLMDKVEILASGGIRHPLDIIKALVLGAKAVGLSRTMLELVEQHSVHEVIAIVNG 328 (365)
T ss_dssp -----CGGGTTCSCBHHHHHHHHG-GGTTTSEEEECSSCCSHHHHHHHHHHTCSEEEESHHHHHHHHHSCHHHHHHHHHH
T ss_pred cccccccccccccccHHHHHHHHH-HhcCCCeEEEeCCCCCHHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHH
Confidence 67889999998764 4445899999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhCCCChhhhcccceeec
Q 017718 328 LREEFELAMALSGCRSLKEITRDHIVTE 355 (367)
Q Consensus 328 l~~el~~~m~~~G~~si~~l~~~~l~~~ 355 (367)
+++||+.+|.++|+++++||++..++..
T Consensus 329 l~~eL~~~m~~~G~~si~eL~~~~~~~~ 356 (365)
T 3sr7_A 329 WKEDLRLIMCALNCQTIAELRNVDYLLY 356 (365)
T ss_dssp HHHHHHHHHHHTTCSSTGGGGGCCEEEC
T ss_pred HHHHHHHHHHHhCCcCHHHhccCCEEEc
Confidence 9999999999999999999999877654
No 8
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=100.00 E-value=2.7e-43 Score=342.43 Aligned_cols=278 Identities=27% Similarity=0.296 Sum_probs=209.4
Q ss_pred ccccccCCCCchhhHHHhHhccccceeeccccC--CCCCCccceeEcCeeeccceEeCcccchhccCChh---hHHHHHH
Q 017718 22 VFDYYASGAEDQWTLQENRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEG---EYATARA 96 (367)
Q Consensus 22 ~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~--~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~---e~~~a~a 96 (367)
-.+|+.....++.|+++|+.+|++|+|+||+|+ +++++||+|+|+|+++++||++|||+++ ++.+ +.+++++
T Consensus 7 k~~hi~~~~~~~~~~~~~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g~---~~~~~~~~~~la~~ 83 (332)
T 1vcf_A 7 KRKHLEACLEGEVAYQKTTTGLEGFRLRYQALAGLALSEVDLTTPFLGKTLKAPFLIGAMTGG---EENGERINLALAEA 83 (332)
T ss_dssp ----------------CCCCSGGGEEECCCTTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcccccchhhhhhcEEehhhCCCCCCCCCCcceEECCcccCCceEEeccccC---CcchhHHHHHHHHH
Confidence 358999999999999999999999999999999 7899999999999999999999999864 4444 4799999
Q ss_pred HHHcCCceeecCCCCCCHHHH--------HhhCC-CceE-----EEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017718 97 ASAAGTIMTLSSWSTSSVEEV--------ASTGP-GIRF-----FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRL 162 (367)
Q Consensus 97 a~~~G~~~~vs~~~~~~~e~i--------~~~~~-~~~~-----~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~ 162 (367)
|+++|+++++|++++. +|+. ....+ .|.+ .|++ ..+++...++ ++..+++++.+++++..
T Consensus 84 a~~~G~~~~~~~~~~~-le~~~~~~~~ql~~~~~d~pv~~~~~~~q~~-~~~~~~~~~a---~~~~~~~a~~i~~n~~~- 157 (332)
T 1vcf_A 84 AEALGVGMMLGSGRIL-LERPEALRSFRVRKVAPKALLIANLGLAQLR-RYGRDDLLRL---VEMLEADALAFHVNPLQ- 157 (332)
T ss_dssp HHHHTCEEEEEECHHH-HHCTTTHHHHCCTTTCSSSCEEEEEEGGGGG-TCCHHHHHHH---HHHHTCSEEEEECCHHH-
T ss_pred HHHcCCCEEeCCchhc-ccCCCccceEEeeccCCCceeecccChhhhh-ccChHHHHHH---HhhcCCCceeeccchHH-
Confidence 9999999999999764 4431 00111 2221 2332 2334444333 34457888888776310
Q ss_pred CchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc--cHH---HHHhhcCCCEEEEec---CCHH
Q 017718 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--SWK---WLQTITKLPILVKGV---LTAE 234 (367)
Q Consensus 163 g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~---~l~~~~~~Pv~vK~v---~~~~ 234 (367)
+.++ ..+.++ .|+ ++|+ +++||++|++ .+++
T Consensus 158 ---------------------------------------~~~~-~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~~~e 196 (332)
T 1vcf_A 158 ---------------------------------------EAVQ-RGDTDFRGLVERLAELLP-LPFPVMVKEVGHGLSRE 196 (332)
T ss_dssp ---------------------------------------HHHT-TSCCCCTTHHHHHHHHCS-CSSCEEEECSSSCCCHH
T ss_pred ---------------------------------------HHhc-CCCccHHHHHHHHHHHHc-CCCCEEEEecCCCCCHH
Confidence 0111 112222 233 8889 9999999988 8999
Q ss_pred HHHHHHHcCCcEEEEcCCCC---------CC---------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH
Q 017718 235 DARIAVQAGAAGIIVSNHGA---------RQ---------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 296 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg---------~~---------~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal 296 (367)
+|+.+.++|+|+|+|+|||| ++ .++++++++.|+++++.++ ++|||++|||+++.|++|+|
T Consensus 197 ~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal 275 (332)
T 1vcf_A 197 AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAKAL 275 (332)
T ss_dssp HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHHHH
Confidence 99999999999999999988 44 6788999999999998874 69999999999999999999
Q ss_pred HcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 297 ALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 297 ~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
++|||+|++||+|++++ +.|++++.++++.+++||+.+|.++|+++++|++++.
T Consensus 276 ~~GAd~V~igr~~l~~~-~~G~~gv~~~~~~l~~el~~~m~~~G~~~i~el~~~~ 329 (332)
T 1vcf_A 276 ALGADLLAVARPLLRPA-LEGAERVAAWIGDYLEELRTALFAIGARNPKEARGRV 329 (332)
T ss_dssp HHTCSEEEECGGGHHHH-TTCHHHHHHHHHHHHHHHHHHHHHHTCSSGGGGTTCE
T ss_pred HhCCChHhhhHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 99999999999999998 7899999999999999999999999999999999764
No 9
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=100.00 E-value=1.7e-40 Score=324.76 Aligned_cols=271 Identities=25% Similarity=0.336 Sum_probs=220.0
Q ss_pred hHhccccceeeccccC--CCCCCccceeEcCeeeccceEeCcccchh-ccCChhhHHHHHHHHHcCCceeecCCCCCCHH
Q 017718 39 NRNAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQK-MAHPEGEYATARAASAAGTIMTLSSWSTSSVE 115 (367)
Q Consensus 39 n~~~~~~i~l~pr~l~--~~~~vd~st~i~g~~l~~Pi~iAPm~~~~-l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e 115 (367)
++.+|++|+|+||+|+ +++++||+|+|+|.++++||++|||++.. ..++++|.+++++|.++|+++++|++++. ++
T Consensus 21 ~~~~f~~~~l~p~~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~ 99 (349)
T 1p0k_A 21 RETGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LK 99 (349)
T ss_dssp CCCSGGGEEECCCSCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TT
T ss_pred ccCccceEEEEccccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-cc
Confidence 3568999999999998 77899999999999999999999996544 44466789999999999999999998654 32
Q ss_pred H---------HHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcccccccc
Q 017718 116 E---------VASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (367)
Q Consensus 116 ~---------i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~ 185 (367)
+ +....+ .|.+.|+..+.+.+... +.++.+|++++.+|++||....+ |
T Consensus 100 ~~~~~~~~~~~~~~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~~~~----------~--------- 157 (349)
T 1p0k_A 100 DPSERLSYEIVRKENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQEIVM----------P--------- 157 (349)
T ss_dssp CHHHHHHHHHHHHHCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTTC----------------------
T ss_pred CcccccceehhhhhCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhhhcC----------C---------
Confidence 2 222233 57888987545655433 44667899999999999752000 0
Q ss_pred ccccCccccccchhhHHHhhhccCcccc-H----HHHHhhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEcCCCC---
Q 017718 186 GLDLGKMDEANDSGLAAYVAGQIDRSLS-W----KWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGA--- 254 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~----~~l~~~~~~Pv~vK~v---~~~~~a~~~~~~G~d~i~vs~~gg--- 254 (367)
..++.++ | +++++.+++||++|++ .+.++++.+.++|+|+|+++||||
T Consensus 158 ---------------------~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~ 216 (349)
T 1p0k_A 158 ---------------------EGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNF 216 (349)
T ss_dssp --------------------------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC------
T ss_pred ---------------------CCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcch
Confidence 0123331 3 3888888999999987 789999999999999999999998
Q ss_pred ------CC-------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHH
Q 017718 255 ------RQ-------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGV 321 (367)
Q Consensus 255 ------~~-------~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v 321 (367)
++ .++++++.+.|+++++.+ .++|||++|||++++|+.|++++|||+|++||+|++.+.+.|++++
T Consensus 217 ~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~ 295 (349)
T 1p0k_A 217 SKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGL 295 (349)
T ss_dssp ---------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHH
T ss_pred hhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHH
Confidence 33 467889999999998876 4799999999999999999999999999999999998877788999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChhhhcccceee
Q 017718 322 RRVLEMLREEFELAMALSGCRSLKEITRDHIVT 354 (367)
Q Consensus 322 ~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~ 354 (367)
.++++.+.+||+.+|.++|++++.|++++.+..
T Consensus 296 ~~~~~~~~~~l~~~m~~~G~~~i~el~~~~~~~ 328 (349)
T 1p0k_A 296 LEEIQLILEELKLIMTVLGARTIADLQKAPLVI 328 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCBHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHhhCCeec
Confidence 999999999999999999999999999998775
No 10
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=100.00 E-value=2.7e-40 Score=324.40 Aligned_cols=270 Identities=21% Similarity=0.246 Sum_probs=216.4
Q ss_pred hccccceeeccccC--CCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCC----CH
Q 017718 41 NAFSRILFRPRILI--DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTS----SV 114 (367)
Q Consensus 41 ~~~~~i~l~pr~l~--~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~----~~ 114 (367)
+.||+|+|+|+.|+ +.+++||+|+|+|++++.||++|||++++....+.|..++++|+++|+++++|+++.. ..
T Consensus 27 ~~~~~v~l~~~~lp~~~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~ 106 (368)
T 3vkj_A 27 TFLNDVILVHQGFPGISFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEA 106 (368)
T ss_dssp CSGGGEEECCCSSCBSBGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGG
T ss_pred CCcceEEEEcCCCCccCcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHH
Confidence 57999999999999 7899999999999999999999999988765556778899999999999999999421 11
Q ss_pred -H--H-HHhhCC-CceEEEEee----c-CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccc
Q 017718 115 -E--E-VASTGP-GIRFFQLYV----Y-KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNF 184 (367)
Q Consensus 115 -e--~-i~~~~~-~~~~~QLy~----~-~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~ 184 (367)
+ + +.+..| .+.+-.+.. . .+.+...+. ++..+++++.|+++. .
T Consensus 107 ~~s~~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~a---v~~~~a~al~Ihln~-~----------------------- 159 (368)
T 3vkj_A 107 RESFAIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDA---IQMIEADAIAVHLNP-A----------------------- 159 (368)
T ss_dssp SHHHHHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHH---HHHTTCSEEEEECCH-H-----------------------
T ss_pred HhhHHHHHHhCcCcceecCcCeeecCCCCCHHHHHHH---HHHhcCCCeEEEecc-h-----------------------
Confidence 1 1 333455 334433332 2 344544333 444588888888771 1
Q ss_pred cccccCccccccchhhHHHhhhccCcccc---H---HHHHhhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEcCCCCC
Q 017718 185 QGLDLGKMDEANDSGLAAYVAGQIDRSLS---W---KWLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGAR 255 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~---~~l~~~~~~Pv~vK~v---~~~~~a~~~~~~G~d~i~vs~~gg~ 255 (367)
.+.+++..++++. | +++++.+++||++|++ .++++|+.+.++|+|+|+|+||||+
T Consensus 160 ----------------~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aGad~I~V~g~GGt 223 (368)
T 3vkj_A 160 ----------------QEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGT 223 (368)
T ss_dssp ----------------HHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTTCCEEECCCBTSB
T ss_pred ----------------hhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCCCCEEEEeCCCCC
Confidence 1112222234332 2 3888889999999988 7999999999999999999999993
Q ss_pred ---------C--------------CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 256 ---------Q--------------LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 256 ---------~--------------~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+ .+++.++...|.++++.++ ++|||++|||+++.|++|+|++|||+|++||||+++
T Consensus 224 ~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~GGI~~~~d~~kal~lGA~~v~ig~~~l~~ 302 (368)
T 3vkj_A 224 NWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGSGGIRSGLDAAKAIALGADIAGMALPVLKS 302 (368)
T ss_dssp CHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHH
T ss_pred cccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHHH
Confidence 2 2457888899999988774 699999999999999999999999999999999998
Q ss_pred hhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccceeec
Q 017718 313 LAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 355 (367)
Q Consensus 313 l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~ 355 (367)
+. .|++++.++++.+.+||+.+|..+|+++++||++..+...
T Consensus 303 ~~-~G~~~v~~~l~~l~~eL~~~m~~~G~~~i~el~~~~l~~~ 344 (368)
T 3vkj_A 303 AI-EGKESLEQFFRKIIFELKAAMMLTGSKDVDALKKTSIVIL 344 (368)
T ss_dssp HH-HCHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCEEEC
T ss_pred Hh-cChHHHHHHHHHHHHHHHHHHHHhCCCCHHHhccCCEEec
Confidence 76 6999999999999999999999999999999998887654
No 11
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=7.9e-42 Score=339.20 Aligned_cols=311 Identities=18% Similarity=0.222 Sum_probs=232.4
Q ss_pred HHhCCccccccccCCCCchhhHHHhHhccccceeecc-ccCCCCCCccceeEcCeeeccceEeCcccchhccCChhhHHH
Q 017718 15 KEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPR-ILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYAT 93 (367)
Q Consensus 15 ~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr-~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~ 93 (367)
..+||+..|+|+.+|++++ ++|..+||+|+|+|+ .+++++++||+|+|+|+++++||++|||++ +.+ .++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~---~~~~~~fd~v~l~p~~~~~~~~~vdlst~l~g~~l~~Pii~Apm~g--~~~----~~~ 83 (393)
T 2qr6_A 13 ENLYFQGMRDHVEIGIGRE---ARRTYSLDDISVVSSRRTRSSKDVDTTWHIDAYKFDLPFMNHPSDA--LAS----PEF 83 (393)
T ss_dssp -CHHHHHHHHEEEEETTEE---EECCCCGGGEEECCCSCCCCGGGCBCCEEETTEEESSSEEECCCTT--TCC----HHH
T ss_pred ccccccchHHHHhcccccc---cccCCChhhEEEccCCCCCChhHCCceeEEcccccCCCeEeCCCCC--ccc----HHH
Confidence 3578999999999999999 468899999999998 888999999999999999999999999984 334 479
Q ss_pred HHHHHHcCCceeecC--------CCCCCHHHHHhhCC-------CceEEEEeecC-CHHHHHHHHHHHHHcCCcEEEEec
Q 017718 94 ARAASAAGTIMTLSS--------WSTSSVEEVASTGP-------GIRFFQLYVYK-DRNVVAQLVRRAERAGFKAIALTV 157 (367)
Q Consensus 94 a~aa~~~G~~~~vs~--------~~~~~~e~i~~~~~-------~~~~~QLy~~~-d~~~~~~~l~ra~~~G~~ai~itv 157 (367)
++++.+.|.++++++ .++.++|++.+... .+.|+|+|... |++...+++++++++|+.+++ .+
T Consensus 84 a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-~v 162 (393)
T 2qr6_A 84 VIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-RV 162 (393)
T ss_dssp HHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-EE
T ss_pred HHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-Ee
Confidence 999999999999986 22235566654322 35799998655 999999999999999988765 22
Q ss_pred CCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccH---HHHHhhcCCCEEEEecCCHH
Q 017718 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKGVLTAE 234 (367)
Q Consensus 158 d~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~v~~~~ 234 (367)
.+.+..+....+.-. +... ..++.... .+++ ..+..+| .++++.+++||++|++.+++
T Consensus 163 ----~~~~~~e~a~~~~~a-gad~---i~i~~~~~-------~~~~----~~~~~~~~~i~~l~~~~~~pvi~ggi~t~e 223 (393)
T 2qr6_A 163 ----SPQNVREIAPIVIKA-GADL---LVIQGTLI-------SAEH----VNTGGEALNLKEFIGSLDVPVIAGGVNDYT 223 (393)
T ss_dssp ----CTTTHHHHHHHHHHT-TCSE---EEEECSSC-------CSSC----CCC-----CHHHHHHHCSSCEEEECCCSHH
T ss_pred ----CCccHHHHHHHHHHC-CCCE---EEEeCCcc-------cccc----CCCcccHHHHHHHHHhcCCCEEECCcCCHH
Confidence 223444444333100 0000 00000000 0001 1122244 38999999999999999999
Q ss_pred HHHHHHHcCCcEEEEcC--CCCCCCC-CccchHHHHHHHHHH-------hcCC-CcEEEecCCCCHHHHHHHHHcCCCEE
Q 017718 235 DARIAVQAGAAGIIVSN--HGARQLD-YVPATIMALEEVVKA-------TQGR-IPVFLDGGVRRGTDVFKALALGASGI 303 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~--~gg~~~~-~~~~~~~~l~~i~~~-------~~~~-~~via~GGI~~~~dv~kal~lGAd~V 303 (367)
+|+.+.++|+|+|+|++ |++++++ +++++++.|+++++. ++++ +|||++|||+++.|++|+|++|||+|
T Consensus 224 ~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 224 TALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 99999999999999977 5555544 468999999999877 5334 99999999999999999999999999
Q ss_pred EechHH-----------HHHhhccCh---HH--------------HHHHH----------HHHHHHHHHHHHHhCCCChh
Q 017718 304 FIGRPV-----------VYSLAAEGE---KG--------------VRRVL----------EMLREEFELAMALSGCRSLK 345 (367)
Q Consensus 304 ~ig~~~-----------l~~l~~~G~---~~--------------v~~~i----------~~l~~el~~~m~~~G~~si~ 345 (367)
++||+| +|++++.|. +| +.+++ +.+++||+..|.++|+++++
T Consensus 304 ~iG~~~l~~~es~~~~~~~g~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~el~~~m~~~G~~~i~ 383 (393)
T 2qr6_A 304 VLGSPLARAEEAAGKGYFWPAVAAHPRFPRGVVTESVDLDEAAPSLEQILHGPSTMPWGVENFEGGLKRALAKCGYTDLK 383 (393)
T ss_dssp EECGGGGGSTTCTTTTEECCGGGGCSSSCCCCCEECC----CCCCHHHHHHCCCSCTTSSSCHHHHHHHHHHHHTCSBHH
T ss_pred EECHHHHcCCCCCCceEEEecccCcccCCCccccccccccccchhHHHHhccchhHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 999996 455544332 22 23333 36689999999999999999
Q ss_pred hhcccceee
Q 017718 346 EITRDHIVT 354 (367)
Q Consensus 346 ~l~~~~l~~ 354 (367)
||++..+..
T Consensus 384 el~~~~~~~ 392 (393)
T 2qr6_A 384 SFQKVSLHV 392 (393)
T ss_dssp HHTTCCEEE
T ss_pred HHhhccEec
Confidence 999887754
No 12
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=100.00 E-value=8.5e-36 Score=290.07 Aligned_cols=262 Identities=18% Similarity=0.204 Sum_probs=188.6
Q ss_pred hHHHhHhccccceeeccc--cCCCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHH-cCCceeecCCCC
Q 017718 35 TLQENRNAFSRILFRPRI--LIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASA-AGTIMTLSSWST 111 (367)
Q Consensus 35 t~~~n~~~~~~i~l~pr~--l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~-~G~~~~vs~~~~ 111 (367)
-.-+|..+||+|.|+||+ +.+++++||+|+|+|+++++||++|||++.+ +..+++++.+ .|+.+...++..
T Consensus 8 ~~~~~~~~fd~v~l~p~~~~~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------~~~la~a~~~~gg~g~~~~~~~~ 81 (336)
T 1ypf_A 8 HHMGNVFDYEDIQLIPAKCIVNSRSECDTTVTLGKHKFKLPVVPANMQTII------DERIATYLAENNYFYIMHRFQPE 81 (336)
T ss_dssp ----CCCCGGGEEECCCCCCCSSGGGCBCCEEETTEEESSSEEECSSTTTC------CHHHHHHHHHTTCCCCCCCSSGG
T ss_pred ccccccCCcceEEEecccCCCCCcccCcceEEECCEEecCcEEECCCCCCC------hHHHHHHHHhCCCEEEecCCCCH
Confidence 346789999999999999 5789999999999999999999999998764 4667765444 455555544322
Q ss_pred CCHHHHHhh--CCCceEEEEeecCCHHHHHHHHHHHHHcC--CcEEEEecCCCCCCchhHHhhhhcCCCCcccccccccc
Q 017718 112 SSVEEVAST--GPGIRFFQLYVYKDRNVVAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGL 187 (367)
Q Consensus 112 ~~~e~i~~~--~~~~~~~QLy~~~d~~~~~~~l~ra~~~G--~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~ 187 (367)
...+.+.+. ..-+..+|+ +.+++.. +.++++.++| ++++.+++.. |
T Consensus 82 ~~~~~i~~~~~~g~~v~v~~--g~~~~~~-~~a~~~~~~g~~~~~i~i~~~~---G------------------------ 131 (336)
T 1ypf_A 82 KRISFIRDMQSRGLIASISV--GVKEDEY-EFVQQLAAEHLTPEYITIDIAH---G------------------------ 131 (336)
T ss_dssp GHHHHHHHHHHTTCCCEEEE--CCSHHHH-HHHHHHHHTTCCCSEEEEECSS---C------------------------
T ss_pred HHHHHHHHHHhcCCeEEEeC--CCCHHHH-HHHHHHHhcCCCCCEEEEECCC---C------------------------
Confidence 111112211 112345553 3333332 3456666677 6666554310 0
Q ss_pred ccCccccccchhhHHHhhhccCccccH---HHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEcCCCCCCCC-----
Q 017718 188 DLGKMDEANDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSNHGARQLD----- 258 (367)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~-v~~~~~a~~~~~~G~d~i~vs~~gg~~~~----- 258 (367)
++...| +++++.++.|+++|+ +.+.++|+.+.++|||+|+++||||++.+
T Consensus 132 ---------------------~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~ 190 (336)
T 1ypf_A 132 ---------------------HSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKT 190 (336)
T ss_dssp ---------------------CSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHH
T ss_pred ---------------------CcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeeccccc
Confidence 112233 388888877777788 89999999999999999999999998754
Q ss_pred -Cccc--hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH--------------------HHhhc
Q 017718 259 -YVPA--TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA 315 (367)
Q Consensus 259 -~~~~--~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l~~ 315 (367)
++.+ +++.|+++++.+ ++|||++|||+++.|++|+|++|||+|++||+|+ |++++
T Consensus 191 ~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~iGr~~l~t~Es~~~~~~~~g~~~k~~~g~~~ 268 (336)
T 1ypf_A 191 GFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVMIGSLFAGHEESPGETIEKDGKLYKEYFGSAS 268 (336)
T ss_dssp SCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEEESGGGTTCTTSSSCCC---------------
T ss_pred CcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEEeChhhhccccCCCceeeeCCeEeeeeecccc
Confidence 3344 789999998877 8999999999999999999999999999999999 88887
Q ss_pred cChHHHH-----------------HHHHHHHHHHHHHHHHhCCCChhhhcccceeec
Q 017718 316 EGEKGVR-----------------RVLEMLREEFELAMALSGCRSLKEITRDHIVTE 355 (367)
Q Consensus 316 ~G~~~v~-----------------~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~~ 355 (367)
.|++++. ++++.+++||+..|.++|+++++||++..++..
T Consensus 269 ~~~~g~~~~~~g~~~~~~~~g~~~~~~~~l~~el~~~m~~~G~~~i~el~~~~~~~~ 325 (336)
T 1ypf_A 269 EFQKGEKKNVEGKKMFVEHKGSLEDTLIEMEQDLQSSISYAGGTKLDSIRTVDYVVV 325 (336)
T ss_dssp --------CTTSCCSSSSCCCCHHHHHHHHHHHHHHHHHHTTSSBGGGGGGCCEEEC
T ss_pred hhhccCccccccceeeecccccHHHHHHHHHHHHHHHHHHhCcccHHHhCcCCEEEE
Confidence 7777655 899999999999999999999999998877654
No 13
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=100.00 E-value=7.8e-34 Score=276.82 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=203.0
Q ss_pred hccccceeeccccCCCC--CCccc--eeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHH
Q 017718 41 NAFSRILFRPRILIDVS--KIDMN--TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEE 116 (367)
Q Consensus 41 ~~~~~i~l~pr~l~~~~--~vd~s--t~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~ 116 (367)
.+||+|.|+|+.+.+++ ++|++ |+|+|++++.||++||| ++.+|.++|++++++|.+.+++++ .++|+
T Consensus 8 ~~fddv~l~P~~~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee 79 (361)
T 3r2g_A 8 ITFDDVLLVPSYNHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEE 79 (361)
T ss_dssp CCGGGEEECCCCCCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHH
T ss_pred cccceEEEECCCCCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHH
Confidence 37999999999999877 76655 59999999999999999 345689999999999999999864 78888
Q ss_pred HHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCcccccc
Q 017718 117 VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (367)
Q Consensus 117 i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (367)
+.+..+...|+|.|...+++...+.++++.++|++.|.+ |++.. . +
T Consensus 80 ~~~~i~~~~~~~~~~~g~~~~~~e~~~~a~~aGvdvI~i--d~a~G-~-----------~-------------------- 125 (361)
T 3r2g_A 80 NIQEFKKCKGPVFVSVGCTENELQRAEALRDAGADFFCV--DVAHA-H-----------A-------------------- 125 (361)
T ss_dssp HHHHHHTCCSCCBEEECSSHHHHHHHHHHHHTTCCEEEE--ECSCC-S-----------S--------------------
T ss_pred HHHHHhhcceEEEEEcCCCHHHHHHHHHHHHcCCCEEEE--eCCCC-C-----------c--------------------
Confidence 876544456788887778888889999999999996655 54321 0 0
Q ss_pred chhhHHHhhhccCccc-cHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCC------CccchHHHHH
Q 017718 197 DSGLAAYVAGQIDRSL-SWKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLD------YVPATIMALE 268 (367)
Q Consensus 197 ~~~~~~~~~~~~d~~~-~~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~------~~~~~~~~l~ 268 (367)
..+ . ..+++|+.+ ++||++|.+.++++|+.+.++|+|+|.|++|+|++.+ .+.+.++.|+
T Consensus 126 -----~~~-------~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~ 193 (361)
T 3r2g_A 126 -----KYV-------GKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQ 193 (361)
T ss_dssp -----HHH-------HHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHH
T ss_pred -----HhH-------HHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHH
Confidence 000 1 123888887 7999999999999999999999999999999886532 3556778888
Q ss_pred HHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhc---------------------------------
Q 017718 269 EVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA--------------------------------- 315 (367)
Q Consensus 269 ~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~--------------------------------- 315 (367)
++++.. . |||++|||+++.|+.|+|++|||+||+||+|+-...+
T Consensus 194 ~~~~~~--~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~Espg~~~~~~~g~~~k~y~Gm~s~~~~~~~~~~~~ 270 (361)
T 3r2g_A 194 DCSRAD--R-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSAPTPGEVFQKDDGSKVKRYRGMASREAQEAFLGQMH 270 (361)
T ss_dssp HHTTSS--S-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBTTSSSCEEECTTSCEEEEESCCHHHHHHHHHTTCCS
T ss_pred HHHHhC--C-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCccCCceeEEecCCeEEEEEecCCCcchhhhhhcccc
Confidence 776544 2 9999999999999999999999999999998532110
Q ss_pred -----cCh-------HHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 316 -----EGE-------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 316 -----~G~-------~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
+|. ..+.+++..|...|+..|.++|+.+|.||+..
T Consensus 271 ~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~~m~y~G~~~i~~l~~~ 317 (361)
T 3r2g_A 271 EWKTAEGVATEVPFKENPDGIIADIIGGLRSGLTYAGADSISELQRK 317 (361)
T ss_dssp TTCCSCCCCEEEECBCCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHT
T ss_pred ccccCCcceeecCCCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhC
Confidence 111 13789999999999999999999999999543
No 14
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=100.00 E-value=7.6e-34 Score=277.50 Aligned_cols=259 Identities=20% Similarity=0.227 Sum_probs=197.6
Q ss_pred HHHhHhccccceeeccccC-CC-CCCccceeEc-----CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecC
Q 017718 36 LQENRNAFSRILFRPRILI-DV-SKIDMNTTVL-----GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS 108 (367)
Q Consensus 36 ~~~n~~~~~~i~l~pr~l~-~~-~~vd~st~i~-----g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~ 108 (367)
+++|..+||+|.|+|+.+. ++ +++||+|+|+ +++++.||++|||++. ++.++++++.++|...+++.
T Consensus 15 ~~~~~~~fddv~l~p~~~~~~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~~------~~~~lA~Ava~~Gglg~i~~ 88 (351)
T 2c6q_A 15 VPRGSLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTV------GTFEMAKVLCKFSLFTAVHK 88 (351)
T ss_dssp ----CCCGGGEEECCCCBCCCCGGGCBCCEEEECTTTCCEEEECCEEECSSTTT------SCHHHHHHHHHTTCEEECCT
T ss_pred cccCCCCcceEEEECCCCCCCccccceeEEEeccccCcCccccCCEEECCCCCC------CcHHHHHHHHHCCCEEEEcC
Confidence 5788999999999999986 68 7999999999 9999999999999864 37899999999998877763
Q ss_pred CCCCCHHHHHhh---CCC---ceEEEEeecCCHHHHHHHHHHHHHc--CCcEEEEecCCCCCCchhHHhhhhcCCCCccc
Q 017718 109 WSTSSVEEVAST---GPG---IRFFQLYVYKDRNVVAQLVRRAERA--GFKAIALTVDTPRLGRREADIKNRFTLPPFLT 180 (367)
Q Consensus 109 ~~~~~~e~i~~~---~~~---~~~~QLy~~~d~~~~~~~l~ra~~~--G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~ 180 (367)
+.++|++.+. .|. +....+ +.+.+.. +.++.+.+. |++++.+++.. |
T Consensus 89 --~~s~e~~~~~i~~~p~~l~~v~~~~--g~~~~~~-~~~~~l~~~~~g~~~i~i~~~~---g----------------- 143 (351)
T 2c6q_A 89 --HYSLVQWQEFAGQNPDCLEHLAASS--GTGSSDF-EQLEQILEAIPQVKYICLDVAN---G----------------- 143 (351)
T ss_dssp --TCCHHHHHHHHHHCGGGCTTEEEEE--CSSHHHH-HHHHHHHHHCTTCCEEEEECSC---T-----------------
T ss_pred --CCCHHHHHHHHhhCchhhheeEeec--CCChHHH-HHHHHHHhccCCCCEEEEEecC---C-----------------
Confidence 4567765443 221 122222 2333332 334444444 78877664421 0
Q ss_pred cccccccccCccccccchhhHHHhhhccCccccH---HHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC-
Q 017718 181 LKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW---KWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR- 255 (367)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~- 255 (367)
++...| +++|+.+ ++||++|.+.+.++|+.+.++|+|+|+|++|||+
T Consensus 144 ----------------------------~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 144 ----------------------------YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp ----------------------------TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTT
T ss_pred ----------------------------CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEECCCCCcC
Confidence 011122 3888888 8999999999999999999999999999988763
Q ss_pred ----CC-CCccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH-------------------
Q 017718 256 ----QL-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV------------------- 310 (367)
Q Consensus 256 ----~~-~~~~~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l------------------- 310 (367)
++ .++.+++..|+++.+.++. ++|||++|||+++.|++|+|++|||+|++||+|+
T Consensus 196 ~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl~~~Es~~~~~~~~g~~~k~ 275 (351)
T 2c6q_A 196 CTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKL 275 (351)
T ss_dssp BCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSCSCEEEETTEEEEE
T ss_pred cCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHhcCccCcchhhhhcCeeeee
Confidence 22 2367788888888776532 7999999999999999999999999999999997
Q ss_pred -HHhhccC--------------hHH----------HHHHHHHHHHHHHHHHHHhCCCChhhhccccee
Q 017718 311 -YSLAAEG--------------EKG----------VRRVLEMLREEFELAMALSGCRSLKEITRDHIV 353 (367)
Q Consensus 311 -~~l~~~G--------------~~~----------v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~ 353 (367)
|++++.| ++| +.++++.|+.||+..|.++|+++++||++....
T Consensus 276 ~~g~~~~~a~~~~~g~~~~~~~~~g~~~~~~~~g~v~~~~~~l~~~l~~~m~~~G~~~i~~l~~~~~~ 343 (351)
T 2c6q_A 276 FYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTF 343 (351)
T ss_dssp EECTTBHHHHHHHSSSCCTTCCCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBGGGHHHHCCE
T ss_pred ccccccHhhhhcccccccccccccceEEEeeccCcHHHHHHHHHHHHHHHHHHcCCCCHHHHhhCCcE
Confidence 5655433 366 999999999999999999999999999866443
No 15
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.97 E-value=3.5e-30 Score=256.41 Aligned_cols=297 Identities=18% Similarity=0.237 Sum_probs=180.0
Q ss_pred hccccceeeccccC-CCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH
Q 017718 41 NAFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA 118 (367)
Q Consensus 41 ~~~~~i~l~pr~l~-~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~ 118 (367)
.+||+|.|+|+.+. +++++||+|+|+ |++++.||++|||++++ +..++.++.+.|...+++ ++.++|++.
T Consensus 10 ~~fd~v~l~p~~~~~~~~~vdlst~l~~g~~l~~Pii~Apm~~~~------~~ela~a~a~aGglg~i~--~~~s~e~~~ 81 (404)
T 1eep_A 10 LTFDDVSLIPRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVT------ESQMAIAIAKEGGIGIIH--KNMSIEAQR 81 (404)
T ss_dssp CCGGGEEECCCCCCSCGGGCCCCEESSSSCEESSSEEECCCTTTC------SHHHHHHHHHHTSEEEEC--SSSCHHHHH
T ss_pred CCcccEEEccCCCCcCccccccceeccCCcccCCCEEeCCCCCCC------CHHHHHHHHHCCCEEEEC--CCCCHHHHH
Confidence 57999999999997 789999999999 99999999999998743 556777788888877776 456777765
Q ss_pred hhCCCceEEE----EeecCCHHHHH-HHHHHHHH----cCCcEEEEecCCCCCCchhHHhhhhcCCCCcccccccccccc
Q 017718 119 STGPGIRFFQ----LYVYKDRNVVA-QLVRRAER----AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDL 189 (367)
Q Consensus 119 ~~~~~~~~~Q----Ly~~~d~~~~~-~~l~ra~~----~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~ 189 (367)
+..+...++| +|...+..+.+ .++..... .+.+.+..+.+.|.. .|+.+-+..+ ..|+....
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~-------~~~i~~~~- 152 (404)
T 1eep_A 82 KEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRV-------GAAVSIDI- 152 (404)
T ss_dssp HHHHHHHTCC--------------------------------------CCTTC-CBCTTSCBCC-------EEEECSCT-
T ss_pred HHHHHHHhhccCCCceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceE-------EEEeCCCh-
Confidence 4322111221 33222211100 00000000 011122222233321 1110000000 00000000
Q ss_pred Cccc--cccchhhHHHh---hhccCccccHH---HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC----
Q 017718 190 GKMD--EANDSGLAAYV---AGQIDRSLSWK---WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---- 256 (367)
Q Consensus 190 ~~~~--~~~~~~~~~~~---~~~~d~~~~~~---~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~---- 256 (367)
.... ..........+ ....++...|+ ++|+.+ ++||+++.+.+.++|+.+.++|+|+|+++.++|+.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~ 232 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKVGIGPGSICTTR 232 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHH
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCcc
Confidence 0000 00000000000 01123334454 788888 79999999999999999999999999996545431
Q ss_pred --CCCccchHHHHHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH--------------------HHh
Q 017718 257 --LDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSL 313 (367)
Q Consensus 257 --~~~~~~~~~~l~~i~~~~~-~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l 313 (367)
.+.+.+.++.++++.+.+. .++|||++|||++++|+.|++++|||+|++||+|+ +++
T Consensus 233 ~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~ 312 (404)
T 1eep_A 233 IVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKESPSEEIIYNGKKFKSYVGM 312 (404)
T ss_dssp HHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTSSSCEEEETTEEEEC----
T ss_pred ccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhCHHHhcCCCCCcchhhhCCeEEeecCCC
Confidence 1234557788888887654 37999999999999999999999999999999994 333
Q ss_pred hc-------------------------cChHH-------HHHHHHHHHHHHHHHHHHhCCCChhhhcccceee
Q 017718 314 AA-------------------------EGEKG-------VRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 354 (367)
Q Consensus 314 ~~-------------------------~G~~~-------v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~~ 354 (367)
.. +|.++ |.++++.|.+||+..|.++|+++++||++..+..
T Consensus 313 ~~~g~~~~g~~~~~~~g~~~~~~~l~~~g~~~~v~~~~~v~~~~~~l~~el~~~m~~~G~~~i~~l~~~~~~~ 385 (404)
T 1eep_A 313 GSISAMKRGSKSRYFQLENNEPKKLVPEGIEGMVPYSGKLKDILTQLKGGLMSGMGYLGAATISDLKINSKFV 385 (404)
T ss_dssp --------------------------------CEECCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHSCCEE
T ss_pred CCHHHHhhccccchhcccccccccccCceeEEeccCCccHHHHHHHHHHHHHHHHHHhCCCCHHHHhhcCcEE
Confidence 21 23333 8899999999999999999999999999876553
No 16
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.93 E-value=1.9e-24 Score=207.90 Aligned_cols=239 Identities=19% Similarity=0.197 Sum_probs=179.2
Q ss_pred CccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCC-C--------------------------C
Q 017718 59 IDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW-S--------------------------T 111 (367)
Q Consensus 59 vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~-~--------------------------~ 111 (367)
+|++++|+|+++++||++||+... .+..+.+.+.+.|+.+++..+ + +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~~~------~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGVLC------STEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTSSC------SSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCCCC------CCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 589999999999999999985421 245667789999999865422 1 1
Q ss_pred CCHH----HHHhh-C--CCceEEEEeecCCHHHHHHHHHHHHHcCCc---EEEEecCCCCCCchhHHhhhhcCCCCcccc
Q 017718 112 SSVE----EVAST-G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK---AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (367)
Q Consensus 112 ~~~e----~i~~~-~--~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~---ai~itvd~p~~g~r~~~~~~~~~~p~~~~~ 181 (367)
...+ ++... . ..|...|+. ..+.+...+.+++++++|++ ++.+|+.||.. .+.+++
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~-~g~~~~------------ 141 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV-PGKPQV------------ 141 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS-TTCCCG------------
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC-CCchhh------------
Confidence 1122 23322 2 257888987 56888889999999999999 99999999974 110000
Q ss_pred ccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhcCCCEEEEecC--CHHH----HHHHHHcC-CcEEEEcC
Q 017718 182 KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTITKLPILVKGVL--TAED----ARIAVQAG-AAGIIVSN 251 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~~~Pv~vK~v~--~~~~----a~~~~~~G-~d~i~vs~ 251 (367)
.. ++... .+++|+.+++||++|... +.++ |+.+.++| +|+|+++|
T Consensus 142 -----------------------g~--~~~~~~~ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 142 -----------------------AY--DFEAMRTYLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp -----------------------GG--SHHHHHHHHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred -----------------------cC--CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC
Confidence 00 11111 237888889999999984 4445 88889999 99999988
Q ss_pred CCCC--CCC-----------------Cc----cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechH
Q 017718 252 HGAR--QLD-----------------YV----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 252 ~gg~--~~~-----------------~~----~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~ 308 (367)
+.++ ..+ .+ +..++.++++++.+ .++|||++|||++++|+.+++++|||+|++||+
T Consensus 197 ~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig~~ 275 (314)
T 2e6f_A 197 SVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC-PDKLVFGCGGVYSGEDAFLHILAGASMVQVGTA 275 (314)
T ss_dssp CEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTCSSEEECHH
T ss_pred CCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc-CCCCEEEECCCCCHHHHHHHHHcCCCEEEEchh
Confidence 6531 010 11 22467888888877 589999999999999999999999999999999
Q ss_pred HHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 309 VVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 309 ~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
+++ +|+. +++.++++++.+|...|++|++|+++..
T Consensus 276 ~l~----~~p~----~~~~i~~~l~~~~~~~g~~~i~~~~g~~ 310 (314)
T 2e6f_A 276 LQE----EGPG----IFTRLEDELLEIMARKGYRTLEEFRGRV 310 (314)
T ss_dssp HHH----HCTT----HHHHHHHHHHHHHHHHTCCSSTTTTTCC
T ss_pred hHh----cCcH----HHHHHHHHHHHHHHHcCCCCHHHHhchH
Confidence 997 2553 7889999999999999999999998764
No 17
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.93 E-value=6.5e-24 Score=207.82 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=180.4
Q ss_pred hccccceeeccccCC--CCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHH
Q 017718 41 NAFSRILFRPRILID--VSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (367)
Q Consensus 41 ~~~~~i~l~pr~l~~--~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i 117 (367)
..||++.|+|+ +++ .+++|++|+|. ++.+..||+.|||.+.+ +..++.+..+.|...++.. +.+.++.
T Consensus 13 ~~fddv~l~p~-~~~~~~~~vdl~t~l~~~~~l~~Pii~apM~~vt------~~~lA~avA~~GGlgii~~--~~s~e~~ 83 (361)
T 3khj_A 13 LTFEDILLVPN-YSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQ 83 (361)
T ss_dssp CCGGGEEECCC-CBCCCGGGCCCCEESSSSCEESSSEEECSSTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHH
T ss_pred CCcceEEEECC-CCCCCHHHccCceecccccccCCCEEeecCCCCC------cHHHHHHHHHcCCCeEEec--CCCHHHH
Confidence 37999999998 554 46899999997 79999999999998664 5688887665554444432 3444443
Q ss_pred H----h---hCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccC
Q 017718 118 A----S---TGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (367)
Q Consensus 118 ~----~---~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~ 190 (367)
. + ....+....+... + .+.++.+.++|++.|.++. +. |. |
T Consensus 84 ~~~I~~vk~~~~~pvga~ig~~-~----~e~a~~l~eaGad~I~ld~--a~-G~-----------~-------------- 130 (361)
T 3khj_A 84 VNEVLKVKNSGGLRVGAAIGVN-E----IERAKLLVEAGVDVIVLDS--AH-GH-----------S-------------- 130 (361)
T ss_dssp HHHHHHHHHTTCCCCEEEECTT-C----HHHHHHHHHTTCSEEEECC--SC-CS-----------B--------------
T ss_pred HHHHHHHHhccCceEEEEeCCC-H----HHHHHHHHHcCcCeEEEeC--CC-CC-----------c--------------
Confidence 2 1 1224556666532 2 5667788889999887643 21 00 0
Q ss_pred ccccccchhhHHHhhhccCccc-cHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccch
Q 017718 191 KMDEANDSGLAAYVAGQIDRSL-SWKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPAT 263 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~d~~~-~~~~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~ 263 (367)
..-. .++++++.+++||+++.+.+.++++.+.++|+|+|.++.++|.. ...+.+.
T Consensus 131 ------------------~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~ 192 (361)
T 3khj_A 131 ------------------LNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQ 192 (361)
T ss_dssp ------------------HHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCH
T ss_pred ------------------HHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCc
Confidence 0000 12367777799999999999999999999999999996554421 1245678
Q ss_pred HHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH--------------------HHhhc-------
Q 017718 264 IMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAA------- 315 (367)
Q Consensus 264 ~~~l~~i~~~~~~-~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l~~------- 315 (367)
++.+.++.+.... ++|||++|||+++.|+.|++++|||+|++||+|+ |+++.
T Consensus 193 ~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~t~Esp~~~~~~~g~~~k~y~gm~s~~a~~~~ 272 (361)
T 3khj_A 193 ITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSG 272 (361)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTTBTTSSCEEEEETTEEEEEC------------
T ss_pred HHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhcCCcCCcchhhcCCeEEEEeeccchHHHHhcc
Confidence 8888888654322 7999999999999999999999999999999874 23220
Q ss_pred -------cC-------hH----------HHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 316 -------EG-------EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 316 -------~G-------~~----------~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
++ ++ .+.+++..+...|+..|.++|+.+|.||+..
T Consensus 273 ~~~~y~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~gl~~~~~~~g~~~~~~~~~~ 331 (361)
T 3khj_A 273 SGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRSCMGYLGSASIEELWKK 331 (361)
T ss_dssp ---------------------CEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred chhhhhcccccccccCCCccEEeCCCCCCHHHHHHHHHHHHHHhhhhcCCccHHHHHhC
Confidence 01 12 2778999999999999999999999999754
No 18
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.92 E-value=7.8e-24 Score=203.31 Aligned_cols=238 Identities=20% Similarity=0.203 Sum_probs=177.8
Q ss_pred cceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCC-CC--------------------------
Q 017718 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWST-SS-------------------------- 113 (367)
Q Consensus 61 ~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~-~~-------------------------- 113 (367)
++++++|.++++||++||... +.+..+.+.+.+.|+.+++..+.+ .+
T Consensus 2 l~~~i~g~~l~npv~~Aag~~------~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNASGVH------CMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECTTSS------CSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECCCCC------CCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 679999999999999998321 125678899999999988743311 10
Q ss_pred HH----HHHh---hC--CCceEEEEeecCCHHHHHHHHHHHHHcCCc-EEEEecCCCCCCchhHHhhhhcCCCCcccccc
Q 017718 114 VE----EVAS---TG--PGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTLKN 183 (367)
Q Consensus 114 ~e----~i~~---~~--~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~-ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~ 183 (367)
.+ ++.. .. ..|...|+. ..+.+...+.+++++++|++ ++.+|+.||.. .+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~-~g~~~~-------------- 139 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV-PGEPQL-------------- 139 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS-SSCCCG--------------
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC-CCcccc--------------
Confidence 22 2221 22 357888987 57888889999999999999 99999999974 110000
Q ss_pred ccccccCccccccchhhHHHhhhccCccccH---HHHHhhcCCCEEEEecCC--HHH----HHHHHHcCCcEEEEcCCCC
Q 017718 184 FQGLDLGKMDEANDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKGVLT--AED----ARIAVQAGAAGIIVSNHGA 254 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~v~~--~~~----a~~~~~~G~d~i~vs~~gg 254 (367)
.. ++...+ +++|+.+++||++|...+ .++ |+.+.++|+|+|+++|+.+
T Consensus 140 ---------------------g~--~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~ 196 (311)
T 1jub_A 140 ---------------------AY--DFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIG 196 (311)
T ss_dssp ---------------------GG--CHHHHHHHHHHHTTTCCSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEE
T ss_pred ---------------------cC--CHHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCC
Confidence 00 111112 378888899999999853 323 7888999999999998742
Q ss_pred --CCCC--------------C---cc----chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 255 --RQLD--------------Y---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 255 --~~~~--------------~---~~----~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.+ + ++ ..++.++++++.+++++|||++|||++++|+.+++++|||+|++||++++
T Consensus 197 ~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~vg~~~l~ 276 (311)
T 1jub_A 197 NGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHK 276 (311)
T ss_dssp EEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred cCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEchHHHh
Confidence 1111 0 22 24677888877765589999999999999999999999999999999997
Q ss_pred HhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 312 SLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 312 ~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
+|+. +++.++++++.+|...|++|++|+++..
T Consensus 277 ----~~p~----~~~~i~~~l~~~l~~~g~~si~e~~g~~ 308 (311)
T 1jub_A 277 ----EGPA----IFDRIIKELEEIMNQKGYQSIADFHGKL 308 (311)
T ss_dssp ----HCTH----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred ----cCcH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 2553 7889999999999999999999998754
No 19
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=7e-24 Score=232.96 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=190.8
Q ss_pred eeeccccCCCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCC-------CC------
Q 017718 47 LFRPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWS-------TS------ 112 (367)
Q Consensus 47 ~l~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~-------~~------ 112 (367)
.-.|...++++++|++++++|+++++||++|||++.. +.++++.+.+.|..+++ ++.. +.
T Consensus 519 ~~~p~~~~ev~~v~ls~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~ 592 (1025)
T 1gte_A 519 PELPLFYTPVDLVDISVEMAGLKFINPFGLASAAPTT------SSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR 592 (1025)
T ss_dssp CCBCCCCCGGGGCCCCEEETTEEESSSEEECSSGGGS------SHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEE
T ss_pred cCccccccccccccceeeeccccccCcccccCCCCCC------CHHHHHHHHHCCcCeEEeceecccccccCCCCccEEe
Confidence 3344444567899999999999999999999997653 56788889999988886 1111 00
Q ss_pred ------------------------C-------HHHHHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCC
Q 017718 113 ------------------------S-------VEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (367)
Q Consensus 113 ------------------------~-------~e~i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p 160 (367)
. ++++.+..+ .+.+++++...+.+...+++++++++|+++|.||++||
T Consensus 593 ~~~~g~~~~~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P 672 (1025)
T 1gte_A 593 GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCP 672 (1025)
T ss_dssp CCTTCSCCSSCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCB
T ss_pred ccccccccCCchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCC
Confidence 1 123333344 67899998788999999999999999999999999999
Q ss_pred CCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhcCCCEEEEecCC----H
Q 017718 161 RLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTITKLPILVKGVLT----A 233 (367)
Q Consensus 161 ~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~~~Pv~vK~v~~----~ 233 (367)
.. .+.++. ++ .++. ++.+.|+ ++++.+++||++|+..+ .
T Consensus 673 ~~-~~~~~~---------------------------G~----~~~~--~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~ 718 (1025)
T 1gte_A 673 HG-MGERGM---------------------------GL----ACGQ--DPELVRNICRWVRQAVQIPFFAKLTPNVTDIV 718 (1025)
T ss_dssp CC-CC--------------------------------S----BGGG--CHHHHHHHHHHHHHHCSSCEEEEECSCSSCHH
T ss_pred CC-CCCCCc---------------------------cc----cccc--CHHHHHHHHHHHHHhhCCceEEEeCCChHHHH
Confidence 73 111000 00 0111 3333333 88888899999999864 3
Q ss_pred HHHHHHHHcCCcEEEEcCC--------------------CCCCCC--Cccch----HHHHHHHHHHhcCCCcEEEecCCC
Q 017718 234 EDARIAVQAGAAGIIVSNH--------------------GARQLD--YVPAT----IMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~--------------------gg~~~~--~~~~~----~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
+.|+.+.++|+|+|+++|+ |++... .+++. ++.++++++.+ .++|||++|||+
T Consensus 719 ~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~-~~ipvi~~GGI~ 797 (1025)
T 1gte_A 719 SIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL-PGFPILATGGID 797 (1025)
T ss_dssp HHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHS-TTCCEEEESSCC
T ss_pred HHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHc-CCCCEEEecCcC
Confidence 4589999999999999873 222111 13332 46788888876 369999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcc
Q 017718 288 RGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 349 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~ 349 (367)
|++|+.++|++|||+|++||++++ .+. .+++.+.+||+.+|...|+.++.++.+
T Consensus 798 s~~da~~~l~~Ga~~v~vg~~~l~----~~~----~~~~~~~~~l~~~l~~~G~~~i~~l~g 851 (1025)
T 1gte_A 798 SAESGLQFLHSGASVLQVCSAVQN----QDF----TVIQDYCTGLKALLYLKSIEELQGWDG 851 (1025)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHT----SCT----THHHHHHHHHHHHHHHTTCGGGTTSBT
T ss_pred CHHHHHHHHHcCCCEEEEeecccc----CCc----cHHHHHHHHHHHHHHHcCCCCHHHHhC
Confidence 999999999999999999999986 244 367889999999999999999999987
No 20
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.92 E-value=5.1e-24 Score=234.35 Aligned_cols=301 Identities=18% Similarity=0.171 Sum_probs=203.8
Q ss_pred hHHHHHHHHHhCCccccccccCCCCchhhHHHhHhccccceeeccccCC--CCCCccceeEcCeeeccceEeCcccchhc
Q 017718 7 VMEYEAIAKEKLPKMVFDYYASGAEDQWTLQENRNAFSRILFRPRILID--VSKIDMNTTVLGFKISMPIMIAPTAMQKM 84 (367)
Q Consensus 7 ~~d~~~~A~~~l~~~~~~y~~~ga~~~~t~~~n~~~~~~i~l~pr~l~~--~~~vd~st~i~g~~l~~Pi~iAPm~~~~l 84 (367)
+..+++.|+..- ...|.-+. +.+-.+..-.|+++.+.+..++. ++++|+++ .+..||+++||+++.+
T Consensus 795 i~~l~~~~~~g~-~~~~~~~~-----~~~~~~~~~~~~dl~~~~~~l~~i~~~ev~~~~-----~I~~Pf~isaMS~Gal 863 (1479)
T 1ea0_A 795 IHTLQQAVTNDS-YTTFKKYS-----EQVNKRPPMQLRDLLELRSTKAPVPVDEVESIT-----AIRKRFITPGMSMGAL 863 (1479)
T ss_dssp HHHHHHHHHHTC-HHHHHHHH-----HHHHTSCCCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEEEEECCBTTB
T ss_pred HHHHHHHHHhCC-HHHHHHHH-----hhhccCCCCchhhhhhccCCCCCCCcccccccc-----cccCCeEecCcccccc
Confidence 566777776652 22332221 11111334468999988877754 46788776 5789999999998754
Q ss_pred cCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhh--C--CCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCC
Q 017718 85 AHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAST--G--PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTP 160 (367)
Q Consensus 85 ~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~--~--~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p 160 (367)
.++.+.+++++|.++|+.+.+++.. .+.++.... . ......|+.. +........+ ..++++-|.+.--
T Consensus 864 -S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~~~~~~g~~~~~~IrQ~as-g~FGVn~~~l-----~~a~~ieIKigQG 935 (1479)
T 1ea0_A 864 -SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARFRPDKNGDNWNSAIKQVAS-GRFGVTAEYL-----NQCRELEIKVAQG 935 (1479)
T ss_dssp -CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGSSBCTTSCBCCCSEEEECS-SCTTCCHHHH-----TSCSEEEEECCCT
T ss_pred -CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHhhhccccchhhhhhhhhcC-CCCCcChHHc-----cccchHHHHHhcc
Confidence 4578889999999999998887653 344443211 1 1235678753 2222222222 3566777766322
Q ss_pred CC--------CchhHHh-hhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-cH-------HHHHhhc-C
Q 017718 161 RL--------GRREADI-KNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SW-------KWLQTIT-K 222 (367)
Q Consensus 161 ~~--------g~r~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-------~~l~~~~-~ 222 (367)
.. +.+-.+. ..--.++++.. .++...++++ +| +++|+.+ +
T Consensus 936 AKpG~GG~Lp~~kv~~~IA~~R~~~~Gv~----------------------lisP~~~~d~~s~edl~~~I~~Lk~~~~~ 993 (1479)
T 1ea0_A 936 AKPGEGGQLPGFKVTEMIARLRHSTPGVM----------------------LISPPPHHDIYSIEDLAQLIYDLKQINPD 993 (1479)
T ss_dssp TSTTTCCEECGGGCCHHHHHHHTCCTTCC----------------------EECCSSCTTCSSHHHHHHHHHHHHHHCTT
T ss_pred CCCCcCCCCCHHHHHHHHHHHcCCCCCCC----------------------ccCCCCCcCcCCHHHHHHHHHHHHHhCCC
Confidence 11 0010000 00000111100 1111122233 33 2788888 7
Q ss_pred CCEEEEecC---CHHHHHHHHHcCCcEEEEcCCC-CCC-------CCCccchHHHHHHHHHHh-----cCCCcEEEecCC
Q 017718 223 LPILVKGVL---TAEDARIAVQAGAAGIIVSNHG-ARQ-------LDYVPATIMALEEVVKAT-----QGRIPVFLDGGV 286 (367)
Q Consensus 223 ~Pv~vK~v~---~~~~a~~~~~~G~d~i~vs~~g-g~~-------~~~~~~~~~~l~~i~~~~-----~~~~~via~GGI 286 (367)
+||++|++. ..++|+.+.++|||+|+|+||+ |+. .+++.++...|+++.+.+ ++++|||++|||
T Consensus 994 ~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGI 1073 (1479)
T 1ea0_A 994 AKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGL 1073 (1479)
T ss_dssp CEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSC
T ss_pred CCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCC
Confidence 899999985 3678999999999999999994 432 246778889999998875 347999999999
Q ss_pred CCHHHHHHHHHcCCCEEEechHHHHHhhc---------------------------cChHHHHHHHHHHHHHHHHHHHHh
Q 017718 287 RRGTDVFKALALGASGIFIGRPVVYSLAA---------------------------EGEKGVRRVLEMLREEFELAMALS 339 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l~~l~~---------------------------~G~~~v~~~i~~l~~el~~~m~~~ 339 (367)
+++.|++|+|+|||++|++||++|++++| .|+++|.++++.+.+||+.+|..+
T Consensus 1074 rtG~DVakALaLGAdaV~iGTafL~a~gc~~~r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~~Ma~l 1153 (1479)
T 1ea0_A 1074 KTGRDIVIAAMLGAEEFGIGTASLIAMGCIMVRQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVREILAGL 1153 (1479)
T ss_dssp CSHHHHHHHHHTTCSEEECCHHHHHHHTCCCCCCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCeeeEcHHHHHHHHHHHHhhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998854 367899999999999999999999
Q ss_pred CCCChhhhc
Q 017718 340 GCRSLKEIT 348 (367)
Q Consensus 340 G~~si~~l~ 348 (367)
|+++++||+
T Consensus 1154 G~~si~eL~ 1162 (1479)
T 1ea0_A 1154 GFRSLNEVI 1162 (1479)
T ss_dssp TCSCSGGGT
T ss_pred CCCCHHHHh
Confidence 999999994
No 21
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.91 E-value=2.6e-23 Score=202.67 Aligned_cols=249 Identities=17% Similarity=0.119 Sum_probs=177.1
Q ss_pred eccccCCCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCCC----------------
Q 017718 49 RPRILIDVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWST---------------- 111 (367)
Q Consensus 49 ~pr~l~~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~~---------------- 111 (367)
.|+.-..+++.|++++++|.++++||++|+=... .+....+.+...|..+++ .|...
T Consensus 25 ~~~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~------~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~ 98 (354)
T 4ef8_A 25 TGGQQMGRGSMSLQVNLLNNTFANPFMNAAGVMC------TTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPL 98 (354)
T ss_dssp ---------CCCCCEEETTEEESSSEEECTTSSC------SSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETT
T ss_pred CchhhcCCCCCCcceEECCEECCCCCEeccCCCC------CCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecch
Confidence 3555556888999999999999999999983221 256778888888887664 22210
Q ss_pred ----------CCHHH----HHhh--C-CCceEEEEeecCCHHHHHHHHHHHH---HcCCcEEEEecCCCCCCchhHHhhh
Q 017718 112 ----------SSVEE----VAST--G-PGIRFFQLYVYKDRNVVAQLVRRAE---RAGFKAIALTVDTPRLGRREADIKN 171 (367)
Q Consensus 112 ----------~~~e~----i~~~--~-~~~~~~QLy~~~d~~~~~~~l~ra~---~~G~~ai~itvd~p~~g~r~~~~~~ 171 (367)
..++. +.+. . ..|.++||+ +.+.+...+.+++++ +.|+++|.||+.||..
T Consensus 99 ~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~--------- 168 (354)
T 4ef8_A 99 GSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV--------- 168 (354)
T ss_dssp EEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS---------
T ss_pred hhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC---------
Confidence 12232 3322 1 257889997 678888888999988 5799999999999973
Q ss_pred hcCCCCccccccccccccCccccccchhhHHHhhhccCccc--c-HHHHHhhcCCCEEEEecCC--HHH----HHHHHHc
Q 017718 172 RFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--S-WKWLQTITKLPILVKGVLT--AED----ARIAVQA 242 (367)
Q Consensus 172 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~-~~~l~~~~~~Pv~vK~v~~--~~~----a~~~~~~ 242 (367)
|.+ +. ++. +++. . .+++++.+++||+||+..+ .++ ++.+.++
T Consensus 169 ----~gg---~~--------------------l~~--~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~ 219 (354)
T 4ef8_A 169 ----PGK---PQ--------------------VAY--DFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEF 219 (354)
T ss_dssp ----TTS---CC--------------------GGG--SHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTC
T ss_pred ----CCc---hh--------------------hcc--CHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhC
Confidence 100 00 000 2222 2 2378888899999999854 222 4455588
Q ss_pred C-CcEEEEcCCCC---------CC-------CCC---c----cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 243 G-AAGIIVSNHGA---------RQ-------LDY---V----PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 243 G-~d~i~vs~~gg---------~~-------~~~---~----~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
| +|+|+++|+.+ +. ..+ | +..++.++++++.. .++|||++|||++++|+.+++.+
T Consensus 220 Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~-~~ipII~~GGI~s~~da~~~l~a 298 (354)
T 4ef8_A 220 PKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLA 298 (354)
T ss_dssp TTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESCCCSHHHHHHHHHH
T ss_pred CCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhC-CCCCEEEECCcCCHHHHHHHHHc
Confidence 7 99999987531 10 111 2 23578888888773 47999999999999999999999
Q ss_pred CCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 299 GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 299 GAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
|||+||+||++++. |+. +++.++++|+.+|...|+++++|+++..
T Consensus 299 GAd~V~vgra~l~~----GP~----~~~~i~~~l~~~m~~~G~~si~el~G~~ 343 (354)
T 4ef8_A 299 GASMVQVGTALQEE----GPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp TEEEEEECHHHHHH----CTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred CCCEEEEhHHHHHh----CHH----HHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 99999999999873 664 7788999999999999999999999864
No 22
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.90 E-value=7e-23 Score=225.82 Aligned_cols=273 Identities=19% Similarity=0.151 Sum_probs=191.2
Q ss_pred HhccccceeeccccCC--CCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHH
Q 017718 40 RNAFSRILFRPRILID--VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV 117 (367)
Q Consensus 40 ~~~~~~i~l~pr~l~~--~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i 117 (367)
.-.|+++.+.+..++. ++++++++ .+..||+++||+++.+ .++.+.+++++|.++|+.+.+++.. .+.+..
T Consensus 839 ~~~~r~l~~~~~~~~~i~~~ev~~~~-----~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg-~~pe~~ 911 (1520)
T 1ofd_A 839 VTALRDLLDFNADQPAISLEEVESVE-----SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGG-EDVVRY 911 (1520)
T ss_dssp SCSGGGGEEECCSSCCCCGGGSCCHH-----HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTC-CCGGGG
T ss_pred CcchhhhccccCCCCCCCchhhcccc-----cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCC-CCHHHH
Confidence 3468888888776653 45777665 5789999999998753 3467889999999999999988653 333433
Q ss_pred H-----------hhCC-----------CceEEEEee---cCCHHHHHHHHHHHHHcCCcEEEEecCCCCC--------Cc
Q 017718 118 A-----------STGP-----------GIRFFQLYV---YKDRNVVAQLVRRAERAGFKAIALTVDTPRL--------GR 164 (367)
Q Consensus 118 ~-----------~~~~-----------~~~~~QLy~---~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~--------g~ 164 (367)
. ...| .....|+-. +.+.+. +. .++.+-|.+.--.. +.
T Consensus 912 ~~eir~~~~~~~~~~p~~~~~~nG~~~~~~I~Ql~sg~FGVn~~~----l~-----~ad~IeIKi~QGAKpG~GG~Lp~~ 982 (1520)
T 1ofd_A 912 LTLDDVDSEGNSPTLPHLHGLQNGDTANSAIKQIASGRFGVTPEY----LM-----SGKQLEIKMAQGAKPGEGGQLPGK 982 (1520)
T ss_dssp SCCCCCCTTSCCTTSTTCCSCCTTCCCCCSEEEECTTCTTCCHHH----HH-----HCSEEEEECCCTTSTTSCCEECGG
T ss_pred HhhhccccccccccccccccccCcchHHHHHHHhcCCCCccChhh----cc-----chHHHHHHHhccCCCCCCCCCCHH
Confidence 2 0011 135678732 233232 22 26667766532111 00
Q ss_pred hh----HHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-cH-------HHHHhhc-CCCEEEEecC
Q 017718 165 RE----ADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SW-------KWLQTIT-KLPILVKGVL 231 (367)
Q Consensus 165 r~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-------~~l~~~~-~~Pv~vK~v~ 231 (367)
+- +.+| .+|++.. .+....++++ +| +++|+.+ ++||++|++.
T Consensus 983 kV~~~iA~~R---~~~~Gv~----------------------lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~ 1037 (1520)
T 1ofd_A 983 KVSEYIAMLR---RSKPGVT----------------------LISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVA 1037 (1520)
T ss_dssp GCCHHHHHHH---TSCTTCC----------------------EECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEEC
T ss_pred HHHHHHHHHc---CCCCCCC----------------------eeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 00 0000 0111100 1111122333 23 2788888 8999999985
Q ss_pred ---CHHHHHHHHHcCCcEEEEcCCCC-CC-------CCCccchHHHHHHHHHHh-----cCCCcEEEecCCCCHHHHHHH
Q 017718 232 ---TAEDARIAVQAGAAGIIVSNHGA-RQ-------LDYVPATIMALEEVVKAT-----QGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 232 ---~~~~a~~~~~~G~d~i~vs~~gg-~~-------~~~~~~~~~~l~~i~~~~-----~~~~~via~GGI~~~~dv~ka 295 (367)
..++|+.+.++|||+|+|+||+| +. .+++.++...|+++.+.+ ++++|||++|||+++.|++|+
T Consensus 1038 ~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakA 1117 (1520)
T 1ofd_A 1038 EIGIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMA 1117 (1520)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHH
T ss_pred CCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHH
Confidence 35789999999999999999954 32 246778889999998765 347999999999999999999
Q ss_pred HHcCCCEEEechHHHHHhhc---------------------------cChHHHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 017718 296 LALGASGIFIGRPVVYSLAA---------------------------EGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 348 (367)
Q Consensus 296 l~lGAd~V~ig~~~l~~l~~---------------------------~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~ 348 (367)
|+|||++|++||++|++++| .|+++|.++++.+.+||+.+|..+|+++++||+
T Consensus 1118 LaLGAdaV~iGTafL~algc~~~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~~Ma~lG~~si~eL~ 1197 (1520)
T 1ofd_A 1118 ALMGAEEYGFGSIAMIAEGCIMARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRSLLAHLGYRSLDDII 1197 (1520)
T ss_dssp HHTTCSEEECSHHHHHHTTCCCCCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCSCGGGTT
T ss_pred HHcCCCeeEEcHHHHHHHHHHHHHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHh
Confidence 99999999999999998754 267899999999999999999999999999995
Q ss_pred -cccee
Q 017718 349 -RDHIV 353 (367)
Q Consensus 349 -~~~l~ 353 (367)
+..+.
T Consensus 1198 gr~dll 1203 (1520)
T 1ofd_A 1198 GRTDLL 1203 (1520)
T ss_dssp TCGGGE
T ss_pred CcceEE
Confidence 44443
No 23
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=99.90 E-value=5.8e-24 Score=205.09 Aligned_cols=238 Identities=20% Similarity=0.221 Sum_probs=176.4
Q ss_pred eeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCC---------HHHHHhhCCCceEEEEeecCCHHHHH
Q 017718 69 KISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSS---------VEEVASTGPGIRFFQLYVYKDRNVVA 139 (367)
Q Consensus 69 ~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~---------~e~i~~~~~~~~~~QLy~~~d~~~~~ 139 (367)
++++||++|||++.+ +.++++.+++.|..++++++.+.. .+.+......+.++||+ +.+++...
T Consensus 2 ~l~nri~~APM~~~t------~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l~~~~~~~~~~QL~-g~~~~~~~ 74 (318)
T 1vhn_A 2 SLEVKVGLAPMAGYT------DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELLPQPHERNVAVQIF-GSEPNELS 74 (318)
T ss_dssp ---CEEEECCCTTTC------SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHSCCTTCTTEEEEEE-CSCHHHHH
T ss_pred ccCCCEEECCCCCCC------cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhhhCcCCCeEEEEeC-CCCHHHHH
Confidence 578999999998543 578999999999999888874321 11220112268999999 78999999
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH---H
Q 017718 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---W 216 (367)
Q Consensus 140 ~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~ 216 (367)
+.+++++++ +++|.||++||....|. .++ ++ .+. .++.+.|+ +
T Consensus 75 ~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~-----------------------G~----~l~--~~~~~~~eiv~~ 120 (318)
T 1vhn_A 75 EAARILSEK-YKWIDLNAGCPVRKVVK----EGA-----------------------GG----ALL--KDLRHFRYIVRE 120 (318)
T ss_dssp HHHHHHTTT-CSEEEEEECCCCHHHHH----TTC-----------------------GG----GGG--SCHHHHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEECCCCcHhcCC----CCc-----------------------cc----chh--hCHHHHHHHHHH
Confidence 999999999 99999999999853221 111 00 111 14445454 8
Q ss_pred HHhhcCCCEEEEecC------CHHHHHHHHHcCCcEEEEcCCCCCCC--CCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017718 217 LQTITKLPILVKGVL------TAEDARIAVQAGAAGIIVSNHGARQL--DYVPATIMALEEVVKATQGRIPVFLDGGVRR 288 (367)
Q Consensus 217 l~~~~~~Pv~vK~v~------~~~~a~~~~~~G~d~i~vs~~gg~~~--~~~~~~~~~l~~i~~~~~~~~~via~GGI~~ 288 (367)
+++.+++||++|... ..+.++.+.++|+|+|+| ||++.. ..+++.++.++++++ ++|||++|||++
T Consensus 121 v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~~G~d~i~v--~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s 194 (318)
T 1vhn_A 121 LRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFI--HTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFT 194 (318)
T ss_dssp HHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEE--ESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCS
T ss_pred HHHhhCCCEEEEecCCCChHHHHHHHHHHHHhCCCEEEE--cCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCC
Confidence 888889999999652 136799999999999999 455433 245566666666644 799999999999
Q ss_pred HHHHHHHHH-cCCCEEEechHHH-----HHhhcc----Ch---HHHHHHHHHHHHHHHHHHHHhCCC-Chhhhccccee
Q 017718 289 GTDVFKALA-LGASGIFIGRPVV-----YSLAAE----GE---KGVRRVLEMLREEFELAMALSGCR-SLKEITRDHIV 353 (367)
Q Consensus 289 ~~dv~kal~-lGAd~V~ig~~~l-----~~l~~~----G~---~~v~~~i~~l~~el~~~m~~~G~~-si~~l~~~~l~ 353 (367)
++|+.++++ .|||+||+||+++ +..... |. .++.++++.++++++..|...|.. .+.+++++..+
T Consensus 195 ~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 273 (318)
T 1vhn_A 195 PEDAKRALEESGCDGLLVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGERKAVVEMRKFLAG 273 (318)
T ss_dssp HHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 999999999 7999999999753 333322 43 467889999999999999999975 78888887654
No 24
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.90 E-value=3.3e-22 Score=197.49 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=172.1
Q ss_pred ccccceeecccc-CCCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHh
Q 017718 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (367)
Q Consensus 42 ~~~~i~l~pr~l-~~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (367)
.||++.|+|..- ...+++|++|.|- .+.+..||+-|||++.+ +..||.+.+++|...+++. ..++|++.+
T Consensus 11 t~ddvll~P~~~~~~~~~v~l~t~lt~~l~l~~PIi~a~M~~Vs------~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 11 TFEDILLVPNYSEVLPREVSLETKLTKNVSLKIPLISSAMDTVT------EHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp CGGGEEECCCCBCSCGGGCCCCEESSSSCEESSSEEECSCTTTC------SSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred CceeEEEecCCCccCHHHccCccchhcccCCCCCEEeCCCCCcC------cHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 599999999654 3447899999985 58899999999998654 5589999999999888874 456665432
Q ss_pred h-------CC----CceE--EEEeec-CCHHHH------------------------------HHHHHHHHHcCCcEEEE
Q 017718 120 T-------GP----GIRF--FQLYVY-KDRNVV------------------------------AQLVRRAERAGFKAIAL 155 (367)
Q Consensus 120 ~-------~~----~~~~--~QLy~~-~d~~~~------------------------------~~~l~ra~~~G~~ai~i 155 (367)
. .. .|+- ..|+.. .+.+.. .+.++.+.++|++.+++
T Consensus 83 ~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~~~~~~~p~~~~d~~g~l~v~~~v~~~~~e~~~~lveaGvdvIvl 162 (400)
T 3ffs_A 83 EVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSNNNIDAYSNENLDNKGRLRVGAAIGVNEIERAKLLVEAGVDVIVL 162 (400)
T ss_dssp HHHHHHCCC-------------------------------CCTTCCBCTTSSBCCEEEECCC-CHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhhccCcccCCCCccccccCCCCCHHHHHHHHHhhhCcchhhccccceeEEeecCCCHHHHHHHHHHcCCCEEEE
Confidence 1 11 1111 122100 000000 23334444445554443
Q ss_pred ecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc--cc-HHHHHhhcCCCEEEEecCC
Q 017718 156 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS--LS-WKWLQTITKLPILVKGVLT 232 (367)
Q Consensus 156 tvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~-~~~l~~~~~~Pv~vK~v~~ 232 (367)
+... .++. .+ ++++++.+++||+++.+.+
T Consensus 163 dta~------------------------------------------------G~~~~~~e~I~~ik~~~~i~Vi~g~V~t 194 (400)
T 3ffs_A 163 DSAH------------------------------------------------GHSLNIIRTLKEIKSKMNIDVIVGNVVT 194 (400)
T ss_dssp CCSC------------------------------------------------CSBHHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred eCCC------------------------------------------------CCcccHHHHHHHHHhcCCCeEEEeecCC
Confidence 2110 0111 11 2377777799999999999
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCC-----CC-CCccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHHHcCCCEEEe
Q 017718 233 AEDARIAVQAGAAGIIVSNHGAR-----QL-DYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~-----~~-~~~~~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv~kal~lGAd~V~i 305 (367)
.++|+.+.++|+|+|++++.+|+ .. ..+.+.+..++++.+.++. ++|||++|||+++.|+.|+|++||++||+
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~v 274 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMI 274 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 99999999999999999543332 11 2356788999999877543 79999999999999999999999999999
Q ss_pred chHHH--------------------HHhhc--------------cC-------hH----------HHHHHHHHHHHHHHH
Q 017718 306 GRPVV--------------------YSLAA--------------EG-------EK----------GVRRVLEMLREEFEL 334 (367)
Q Consensus 306 g~~~l--------------------~~l~~--------------~G-------~~----------~v~~~i~~l~~el~~ 334 (367)
|++|+ |+++. ++ ++ .+.+++..|...|+.
T Consensus 275 Gt~f~~t~Es~~~~~~~~g~~~k~y~Gm~s~~am~~~~~~ry~~~~~~~~~~~~eG~~~~v~~~g~~~~~~~~~~~glr~ 354 (400)
T 3ffs_A 275 GSILAGTEESPGEKELIGDTVYKYYRGMGSVGAMKSGSGDRYFQEKRPENKMVPEGIEGRVKYKGEMEGVVYQLVGGLRS 354 (400)
T ss_dssp CGGGTTBTTSSCCEEESSSSEEEC-----------------------------------CEECCBCHHHHHHHHHHHHHH
T ss_pred ChHHhcCCCCCchhhhcCCeeeeeecCcchHHHHhccccchhhcccccccccCCCCcEEecCCCCCHHHHHHHHHHHHHH
Confidence 99883 33321 00 12 277899999999999
Q ss_pred HHHHhCCCChhhhccc
Q 017718 335 AMALSGCRSLKEITRD 350 (367)
Q Consensus 335 ~m~~~G~~si~~l~~~ 350 (367)
.|.++|+.+|.||+..
T Consensus 355 ~~~y~G~~~i~el~~~ 370 (400)
T 3ffs_A 355 CMGYLGSASIEELWKK 370 (400)
T ss_dssp HHHHTTCSSHHHHHHH
T ss_pred hhhhcCcccHHHHHhC
Confidence 9999999999999754
No 25
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.90 E-value=1.6e-22 Score=197.91 Aligned_cols=254 Identities=20% Similarity=0.262 Sum_probs=181.4
Q ss_pred ccccceeecccc-CCCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHh
Q 017718 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (367)
Q Consensus 42 ~~~~i~l~pr~l-~~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (367)
.||++.|+|..- .+.+++|++|+|. .+.+..||+.|||...+ +..++.+..+.|...++.. +.+.|+..+
T Consensus 15 ~fddv~lvp~~~~~~~~~vdl~t~lt~~~~l~~Pii~apM~~vs------~~~lA~avA~aGGlg~i~~--~~s~e~~~~ 86 (366)
T 4fo4_A 15 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIHK--NMSIEQQAA 86 (366)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECS--SSCHHHHHH
T ss_pred CcceEEEECCCCCCChhhcccceecccccccCCCEEeCCCCCCC------hHHHHHHHHHcCCceEeec--CCCHHHHHH
Confidence 699999999722 2446899999997 68999999999998654 6789988888776655542 345555322
Q ss_pred h----CC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCcccc
Q 017718 120 T----GP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDE 194 (367)
Q Consensus 120 ~----~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 194 (367)
. .. .+..+.+-...++ ...+.++.+.++|++.+.++.- .. . |
T Consensus 87 ~i~~vk~~~~l~vga~vg~~~-~~~~~~~~lieaGvd~I~idta--~G-~-----------~------------------ 133 (366)
T 4fo4_A 87 QVHQVKISGGLRVGAAVGAAP-GNEERVKALVEAGVDVLLIDSS--HG-H-----------S------------------ 133 (366)
T ss_dssp HHHHHHTTTSCCCEEECCSCT-TCHHHHHHHHHTTCSEEEEECS--CT-T-----------S------------------
T ss_pred HHHHHHhcCceeEEEEeccCh-hHHHHHHHHHhCCCCEEEEeCC--CC-C-----------C------------------
Confidence 1 11 2222333222222 2345677888899998877431 10 0 0
Q ss_pred ccchhhHHHhhhccCcccc-HHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccchHHH
Q 017718 195 ANDSGLAAYVAGQIDRSLS-WKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMA 266 (367)
Q Consensus 195 ~~~~~~~~~~~~~~d~~~~-~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~~~~ 266 (367)
+..++ ++++++.+ ++||+++.+.+.++|+.+.++|+|+|.++..+|.. ...+.+.+..
T Consensus 134 --------------~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~ 199 (366)
T 4fo4_A 134 --------------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITA 199 (366)
T ss_dssp --------------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHH
T ss_pred --------------HHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHH
Confidence 00011 34777777 78999998999999999999999999995333321 1345678888
Q ss_pred HHHHHHHhc-CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH--------------------Hhhc-----c----
Q 017718 267 LEEVVKATQ-GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----E---- 316 (367)
Q Consensus 267 l~~i~~~~~-~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~~-----~---- 316 (367)
|.++.+..+ .++|||++|||+++.|+.|+|++|||+|++||+|+- +++. +
T Consensus 200 l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~t~Esp~~~~~~~g~~~k~y~gm~s~~am~~~~~~ 279 (366)
T 4fo4_A 200 IADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSD 279 (366)
T ss_dssp HHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHCC----
T ss_pred HHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhcCCCCCchhhhhCCceeEEeeccccHHHHhccccc
Confidence 988887543 279999999999999999999999999999998843 1110 0
Q ss_pred -----C-------hH----------HHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 317 -----G-------EK----------GVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 317 -----G-------~~----------~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
+ ++ .+.+++..|...|+..|.++|+.+|.||+..
T Consensus 280 ry~~~~~~~~~~~~eg~~~~v~~~g~~~~~~~~~~~glr~~~~y~g~~~~~~~~~~ 335 (366)
T 4fo4_A 280 RYFQTDNAADKLVPEGIEGRIAYKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 335 (366)
T ss_dssp -----------CCCSBCEEEEECCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred chhccccccccccCCCcEEecCCCCCHHHHHHHHHHHHHHhhhccCcccHHHHHhC
Confidence 0 01 2788999999999999999999999999853
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.89 E-value=2.8e-22 Score=191.98 Aligned_cols=240 Identities=18% Similarity=0.192 Sum_probs=169.7
Q ss_pred CCCCccceeEcCeeeccceEeCc-ccchhccCChhhHHHHHHHHHcCCceee-------------------------cCC
Q 017718 56 VSKIDMNTTVLGFKISMPIMIAP-TAMQKMAHPEGEYATARAASAAGTIMTL-------------------------SSW 109 (367)
Q Consensus 56 ~~~vd~st~i~g~~l~~Pi~iAP-m~~~~l~~~~~e~~~a~aa~~~G~~~~v-------------------------s~~ 109 (367)
.+++|++++|+|+++++||++|| |.+.+ + .+.+.+.+.|..+++ +..
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aag~~~~~------~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~ 74 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPASGCFGFG------E-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAI 74 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECTTSSTTS------T-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECC
T ss_pred CCCCccceEECCEECCCCcEECCCCCCCC------H-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCccccccc
Confidence 36899999999999999999999 54322 1 234444344444433 111
Q ss_pred --CCCCHHHH--------HhhC-CCceEEEEeecCCHHHHHHHHHHHHH-cCCcEEEEecCCCCCCchhHHhhhhcCCCC
Q 017718 110 --STSSVEEV--------ASTG-PGIRFFQLYVYKDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (367)
Q Consensus 110 --~~~~~e~i--------~~~~-~~~~~~QLy~~~d~~~~~~~l~ra~~-~G~~ai~itvd~p~~g~r~~~~~~~~~~p~ 177 (367)
.+...++. .+.. ..+.++||. ..+.+...+.++++++ +|++++.+|+.||..-.| +.
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~-~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g------~~---- 143 (311)
T 1ep3_A 75 GLQNPGLEVIMTEKLPWLNENFPELPIIANVA-GSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG------GQ---- 143 (311)
T ss_dssp CCCBCCHHHHHHTHHHHHHHHCTTSCEEEEEC-CSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGT------TE----
T ss_pred CCCCcCHHHHHHHHHHHHHhcCCCCcEEEEEc-CCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCc------hh----
Confidence 11233332 2213 368899997 4577888888999988 999999999999863100 00
Q ss_pred ccccccccccccCccccccchhhHHHhhhccCccc--c-HHHHHhhcCCCEEEEecC---C-HHHHHHHHHcCCcEEEEc
Q 017718 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--S-WKWLQTITKLPILVKGVL---T-AEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~-~~~l~~~~~~Pv~vK~v~---~-~~~a~~~~~~G~d~i~vs 250 (367)
. .. .++.+ . .+++++.+++||++|... + .+.++.+.++|+|+|+++
T Consensus 144 --~-----------------------~g--~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 144 --A-----------------------FG--TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp --E-----------------------GG--GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEEC
T ss_pred --h-----------------------hc--CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEe
Confidence 0 00 01222 1 237787779999999873 3 455899999999999998
Q ss_pred C-------CCCCCC---------CCccc----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 251 N-------HGARQL---------DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 251 ~-------~gg~~~---------~~~~~----~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
| |+.+.. ..++. .++.+.++++.+ ++|||++|||++++|+.+++++|||+|++||+++
T Consensus 197 ~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~~l~~GAd~V~vg~~~l 274 (311)
T 1ep3_A 197 NTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANF 274 (311)
T ss_dssp CCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHHHHHHTCSEEEECTHHH
T ss_pred CCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECHHHH
Confidence 7 321110 11222 246677776655 7999999999999999999999999999999998
Q ss_pred HHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 311 YSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
. +++ +++.++++++.+|...|++|++|+++..
T Consensus 275 ~-----~p~----~~~~i~~~l~~~~~~~g~~~~~~~~g~~ 306 (311)
T 1ep3_A 275 A-----DPF----VCPKIIDKLPELMDQYRIESLESLIQEV 306 (311)
T ss_dssp H-----CTT----HHHHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred c-----CcH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 6 443 6778889999999999999999998754
No 27
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.89 E-value=1.4e-21 Score=189.97 Aligned_cols=240 Identities=16% Similarity=0.166 Sum_probs=175.0
Q ss_pred CCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeec-CCCCC------------------------
Q 017718 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLS-SWSTS------------------------ 112 (367)
Q Consensus 58 ~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs-~~~~~------------------------ 112 (367)
..|++++++|.++++||++|+=... .+....+.+...|..+++. |....
T Consensus 35 m~~L~~~~~Gl~~~NPv~lAaG~~~------~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~ 108 (345)
T 3oix_A 35 MVSTHTTIGSFDFDNCLMNAAGVYC------MTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLP 108 (345)
T ss_dssp -CCCCEEETTEEESCSEEECTTSSC------SSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCC
T ss_pred cCCcCeEECCEECCCCCEEcCCCCC------CCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCC
Confidence 3689999999999999999972111 2457888899999887753 22110
Q ss_pred --CH----HHHHhh----CCCceEEEEeecCCHHHHHHHHHHHHHcCCc-EEEEecCCCCCCchhHHhhhhcCCCCcccc
Q 017718 113 --SV----EEVAST----GPGIRFFQLYVYKDRNVVAQLVRRAERAGFK-AIALTVDTPRLGRREADIKNRFTLPPFLTL 181 (367)
Q Consensus 113 --~~----e~i~~~----~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~-ai~itvd~p~~g~r~~~~~~~~~~p~~~~~ 181 (367)
.. +++.+. ...|..+||. ..+.+...+.+++++++|++ +|.||+.||.. | +.
T Consensus 109 n~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~-------------~-G~-- 171 (345)
T 3oix_A 109 NLGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV-------------P-GX-- 171 (345)
T ss_dssp BSCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS-------------T-TC--
T ss_pred ChhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc-------------C-Cc--
Confidence 12 223321 2267899997 67888888999999999988 99999999973 1 00
Q ss_pred ccccccccCccccccchhhHHHhhhccCccc--c-HHHHHhhcCCCEEEEecCC---HHHHHHHHHcCCcEEEEcCC---
Q 017718 182 KNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--S-WKWLQTITKLPILVKGVLT---AEDARIAVQAGAAGIIVSNH--- 252 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~-~~~l~~~~~~Pv~vK~v~~---~~~a~~~~~~G~d~i~vs~~--- 252 (367)
.. ++. +++. . .+++++.+++||++|+..+ .+.++.+.++|+++|++.|.
T Consensus 172 ~~--------------------l~~--~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt 229 (345)
T 3oix_A 172 PQ--------------------IAY--DFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINS 229 (345)
T ss_dssp CC--------------------GGG--CHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCC
T ss_pred hh--------------------hcC--CHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecc
Confidence 00 000 2211 2 2378888899999999853 35578888888877654321
Q ss_pred --------CCC-CC--------CCccc----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 253 --------GAR-QL--------DYVPA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 253 --------gg~-~~--------~~~~~----~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
..+ .+ .+|++ +++.++++++.+++++|||++|||++++|+.+++++|||+||+||+|++
T Consensus 230 ~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~igra~~~ 309 (345)
T 3oix_A 230 IGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQIGTALHQ 309 (345)
T ss_dssp EEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEESHHHHH
T ss_pred cccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEEChHHHh
Confidence 111 11 12233 3678888888776689999999999999999999999999999999877
Q ss_pred HhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 312 SLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 312 ~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
. |+. +++.++++|+.+|...|+++++|+++.
T Consensus 310 ~----gP~----~~~~i~~~L~~~l~~~G~~si~e~~G~ 340 (345)
T 3oix_A 310 E----GPQ----IFKRITKELXAIMTEKGYETLEDFRGK 340 (345)
T ss_dssp H----CTH----HHHHHHHHHHHHHHHHTCCSGGGTTTC
T ss_pred c----ChH----HHHHHHHHHHHHHHHcCCCCHHHHHhH
Confidence 3 664 778899999999999999999999875
No 28
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.89 E-value=6.2e-22 Score=195.72 Aligned_cols=122 Identities=25% Similarity=0.318 Sum_probs=103.8
Q ss_pred CCC-EEEEecCCH------HHHHHHHHcCCcEEEEcCCCCCCCC--------C---cc----chHHHHHHHHHHhcCCCc
Q 017718 222 KLP-ILVKGVLTA------EDARIAVQAGAAGIIVSNHGARQLD--------Y---VP----ATIMALEEVVKATQGRIP 279 (367)
Q Consensus 222 ~~P-v~vK~v~~~------~~a~~~~~~G~d~i~vs~~gg~~~~--------~---~~----~~~~~l~~i~~~~~~~~~ 279 (367)
++| |+||+..+. +.|+.+.++|+|+|+++|+...+.+ + |+ .+++.++++++.+++++|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 689 999998542 3488999999999999998764332 2 22 355789999988877899
Q ss_pred EEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 280 VFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 280 via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
||++|||+|++|+.+++++|||+|+|||++++. |+. +++.++++|+.+|...|+++++|+++..
T Consensus 348 IIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~----GP~----~~~~i~~~L~~~l~~~G~~si~e~~G~~ 411 (415)
T 3i65_A 348 IIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRK 411 (415)
T ss_dssp EEECSSCCSHHHHHHHHHHTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHTTCSSSTTTTTTT
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----CHH----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 999999999999999999999999999999984 664 6778999999999999999999999764
No 29
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.89 E-value=1.9e-21 Score=190.62 Aligned_cols=244 Identities=21% Similarity=0.247 Sum_probs=165.1
Q ss_pred CCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCCC-----------------------
Q 017718 56 VSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWST----------------------- 111 (367)
Q Consensus 56 ~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~~----------------------- 111 (367)
.++.+++++++|.++++||++|+ |.. .+++ ..+...++|..+++ +|.+.
T Consensus 45 ~~~~~L~~~~~Gl~~~NPvglAa-G~~----~~~~--~~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~ 117 (367)
T 3zwt_A 45 QDSDMLEVRVLGHKFRNPVGIAA-GFD----KHGE--AVDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINR 117 (367)
T ss_dssp CCCGGGCEEETTEEESSSEEECT-TSS----TTSS--SHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEEC
T ss_pred CCCCCCcEEECCEEcCCCCEeCC-CcC----CCHH--HHHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeec
Confidence 56789999999999999999996 222 2222 23444456777664 32211
Q ss_pred -----CCH----HHHHhh---------CCCceEEEEeecC----CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHh
Q 017718 112 -----SSV----EEVAST---------GPGIRFFQLYVYK----DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADI 169 (367)
Q Consensus 112 -----~~~----e~i~~~---------~~~~~~~QLy~~~----d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~ 169 (367)
... +++.+. ...|..+||..++ +.+...+.++++.+ +++++.||+.||...
T Consensus 118 ~G~~N~G~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~------ 190 (367)
T 3zwt_A 118 YGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTA------ 190 (367)
T ss_dssp CCCCBCCHHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTST------
T ss_pred cCCCCccHHHHHHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCC------
Confidence 011 222220 1247889996432 23444444444433 589999999999731
Q ss_pred hhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHh-------hcCCCEEEEecCCH------HHH
Q 017718 170 KNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT-------ITKLPILVKGVLTA------EDA 236 (367)
Q Consensus 170 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-------~~~~Pv~vK~v~~~------~~a 236 (367)
+. +.+.. ...+.+. .+.+++ .+++||+||+..+. +.|
T Consensus 191 --------G~--~~l~~----------~~~l~~l----------l~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia 240 (367)
T 3zwt_A 191 --------GL--RSLQG----------KAELRRL----------LTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIA 240 (367)
T ss_dssp --------TG--GGGGS----------HHHHHHH----------HHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHH
T ss_pred --------Cc--cccCC----------HHHHHHH----------HHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHH
Confidence 00 00000 0000000 113332 26899999998542 348
Q ss_pred HHHHHcCCcEEEEcCCC-CCC---------CCCc---cc----hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC
Q 017718 237 RIAVQAGAAGIIVSNHG-ARQ---------LDYV---PA----TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 299 (367)
Q Consensus 237 ~~~~~~G~d~i~vs~~g-g~~---------~~~~---~~----~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG 299 (367)
+.+.++|+|+|+++|+. ++. ..+| ++ +++.++++++.+++++|||++|||+|++|+.+++.+|
T Consensus 241 ~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~G 320 (367)
T 3zwt_A 241 SVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAG 320 (367)
T ss_dssp HHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcC
Confidence 88999999999999875 221 1122 22 4678999999887789999999999999999999999
Q ss_pred CCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 300 ASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 300 Ad~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
||+||+||++++. |+. +++.+.++|+.+|...|+++++|+++..
T Consensus 321 Ad~V~vgra~l~~----gP~----~~~~i~~~l~~~m~~~G~~~i~e~~G~~ 364 (367)
T 3zwt_A 321 ASLVQLYTALTFW----GPP----VVGKVKRELEALLKEQGFGGVTDAIGAD 364 (367)
T ss_dssp CSEEEESHHHHHH----CTH----HHHHHHHHHHHHHHHTTCSSHHHHTTGG
T ss_pred CCEEEECHHHHhc----CcH----HHHHHHHHHHHHHHHcCCCCHHHhhCcc
Confidence 9999999999873 664 6788999999999999999999998754
No 30
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.88 E-value=4.4e-21 Score=186.15 Aligned_cols=207 Identities=17% Similarity=0.164 Sum_probs=135.9
Q ss_pred CCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecC-CCCCC-----------------------
Q 017718 58 KIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSS-WSTSS----------------------- 113 (367)
Q Consensus 58 ~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~-~~~~~----------------------- 113 (367)
.+|++++++|+++++||++|++ . +.+++ +++++.+.|++++++. .+..+
T Consensus 42 ~~~l~~~i~g~~l~npi~~aag-~----~~~~~--~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g 114 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAAG-L----DKDGE--CIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMG 114 (336)
T ss_dssp CCCCCEEETTEEESSSEEECTT-S----STTCC--CHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCC
T ss_pred CCCCCeEECCEEcCCCcEeCcc-c----CCcHH--HHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCC
Confidence 4899999999999999999963 2 33333 8888999999987532 22111
Q ss_pred -----HHH----HHhhC-CCceEEEEeecCC------HHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCC
Q 017718 114 -----VEE----VASTG-PGIRFFQLYVYKD------RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (367)
Q Consensus 114 -----~e~----i~~~~-~~~~~~QLy~~~d------~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~ 177 (367)
.++ +.+.. ..+..+|+....+ .+...+.++++++ |++++.+|+.||...
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~-------------- 179 (336)
T 1f76_A 115 FNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTP-------------- 179 (336)
T ss_dssp CCBCCHHHHHHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSST--------------
T ss_pred CCCcCHHHHHHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCC--------------
Confidence 111 11111 1244555542211 3333344444433 566666666555420
Q ss_pred ccccccccccccCccccccchhhHHHhhhccCccccHH---HHHhhc---------CCCEEEEecCC------HHHHHHH
Q 017718 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK---WLQTIT---------KLPILVKGVLT------AEDARIA 239 (367)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~l~~~~---------~~Pv~vK~v~~------~~~a~~~ 239 (367)
+ .+.. .++.+.|+ ++|+.+ ++||++|...+ .+.|+.+
T Consensus 180 -------------------g---~~~~---~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l 234 (336)
T 1f76_A 180 -------------------G---LRTL---QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSL 234 (336)
T ss_dssp -------------------T---GGGG---GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHH
T ss_pred -------------------C---cccc---cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHH
Confidence 0 0000 02333343 788777 89999998853 2348999
Q ss_pred HHcCCcEEEEcCCC-CCC---------CCC---cc----chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCE
Q 017718 240 VQAGAAGIIVSNHG-ARQ---------LDY---VP----ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASG 302 (367)
Q Consensus 240 ~~~G~d~i~vs~~g-g~~---------~~~---~~----~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~ 302 (367)
.++|+|+|+++|++ +++ ..+ |+ ..++.++++++.+++++|||++|||++++|+.++|++|||+
T Consensus 235 ~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~ 314 (336)
T 1f76_A 235 VRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASL 314 (336)
T ss_dssp HHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSE
T ss_pred HHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCE
Confidence 99999999999874 222 011 22 24577888888886689999999999999999999999999
Q ss_pred EEechHHHH
Q 017718 303 IFIGRPVVY 311 (367)
Q Consensus 303 V~ig~~~l~ 311 (367)
|++||++++
T Consensus 315 V~igr~~l~ 323 (336)
T 1f76_A 315 VQIYSGFIF 323 (336)
T ss_dssp EEESHHHHH
T ss_pred EEeeHHHHh
Confidence 999999997
No 31
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.87 E-value=7.3e-21 Score=190.24 Aligned_cols=123 Identities=24% Similarity=0.331 Sum_probs=103.0
Q ss_pred cCCC-EEEEecCC--HHH----HHHHHHcCCcEEEEcCCCCCCCC--------Cc---c----chHHHHHHHHHHhcCCC
Q 017718 221 TKLP-ILVKGVLT--AED----ARIAVQAGAAGIIVSNHGARQLD--------YV---P----ATIMALEEVVKATQGRI 278 (367)
Q Consensus 221 ~~~P-v~vK~v~~--~~~----a~~~~~~G~d~i~vs~~gg~~~~--------~~---~----~~~~~l~~i~~~~~~~~ 278 (367)
.++| |++|+..+ .++ |+.+.++|+|+|+++|+...+.+ +| + .+++.++++++.+++++
T Consensus 295 ~~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 295 KKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQI 374 (443)
T ss_dssp SSCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCS
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCC
Confidence 4689 99999854 333 88999999999999997654322 22 2 14678899988887789
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 279 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
|||++|||++++|+.++|++|||+||+||++++. |+. +++.+++++..+|...|+++++|+++..
T Consensus 375 PVIg~GGI~s~~DA~e~l~aGAd~Vqigrall~~----gP~----l~~~i~~~l~~~l~~~G~~si~e~~G~~ 439 (443)
T 1tv5_A 375 PIIASGGIFSGLDALEKIEAGASVCQLYSCLVFN----GMK----SAVQIKRELNHLLYQRGYYNLKEAIGRK 439 (443)
T ss_dssp CEEEESSCCSHHHHHHHHHTTEEEEEESHHHHHH----GGG----HHHHHHHHHHHHHHHHTCSSSGGGTTTT
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhc----ChH----HHHHHHHHHHHHHHHhCCCCHHHHhhhh
Confidence 9999999999999999999999999999999983 553 7788899999999999999999999875
No 32
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.86 E-value=1.4e-20 Score=192.07 Aligned_cols=151 Identities=20% Similarity=0.258 Sum_probs=119.7
Q ss_pred HHHhhc-C-CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC-----C-CCCccchHHHHHHHHHHhcC-------CCcE
Q 017718 216 WLQTIT-K-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR-----Q-LDYVPATIMALEEVVKATQG-------RIPV 280 (367)
Q Consensus 216 ~l~~~~-~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~-----~-~~~~~~~~~~l~~i~~~~~~-------~~~v 280 (367)
++++.+ + +||+++.+.+.++++.+.++|+|+|+++.+||. . .+++.+++.+|.++.+.++. ++||
T Consensus 276 ~lk~~~~~~~~Vi~G~V~t~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipv 355 (503)
T 1me8_A 276 WIREKYGDKVKVGAGNIVDGEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPV 355 (503)
T ss_dssp HHHHHHGGGSCEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCE
T ss_pred HHHHhCCCCceEeeccccCHHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceE
Confidence 788876 4 899999999999999999999999999655542 2 23578899999999876532 5999
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEechHHH--------------------HHhhccCh----------------------
Q 017718 281 FLDGGVRRGTDVFKALALGASGIFIGRPVV--------------------YSLAAEGE---------------------- 318 (367)
Q Consensus 281 ia~GGI~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l~~~G~---------------------- 318 (367)
|++|||+++.|++|||++|||+|++|++|+ |++++.|.
T Consensus 356 ia~GGi~~~~di~kAlalGA~~V~iG~~~~~~~E~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~eg~~~ 435 (503)
T 1me8_A 356 CSDGGIVYDYHMTLALAMGADFIMLGRYFARFEESPTRKVTINGSVMKEYWGEGSSRARNWQRYDLGGKQKLSFEEGVDS 435 (503)
T ss_dssp EEESCCCSHHHHHHHHHTTCSEEEESHHHHTBTTSSSCEEEETTEEEEEEECTTSHHHHCC--------------CCCEE
T ss_pred EEeCCCCCHHHHHHHHHcCCCEEEECchhhccccCCCceEEECCeEEEeecCccchhHhhccccccccccceecccceeE
Confidence 999999999999999999999999999996 23222111
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHhCCCChhhhcc-cceeeccCCCCCCCCCC
Q 017718 319 -----KGVRRVLEMLREEFELAMALSGCRSLKEITR-DHIVTEWDASLPRPVPR 366 (367)
Q Consensus 319 -----~~v~~~i~~l~~el~~~m~~~G~~si~~l~~-~~l~~~~~~~~~~~~~~ 366 (367)
.++.++++.|..||+..|.++|+++++||++ ..+......+....-||
T Consensus 436 ~~~~~~~v~~~~~~~~~~l~~~m~~~G~~~i~~l~~~~~~~~~~~~~~~e~~~~ 489 (503)
T 1me8_A 436 YVPYAGKLKDNVEASLNKVKSTMCNCGALTIPQLQSKAKITLVSSVSIVEGGAH 489 (503)
T ss_dssp EEECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHHCCEEECCTTCSTTTSCC
T ss_pred ecCCCCcHHHHHHHHHHHHHHHHHhcCcchHHHHHhCCCEEEEcccccccCCCc
Confidence 2578999999999999999999999999986 44444333343333333
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.85 E-value=8.4e-20 Score=183.50 Aligned_cols=136 Identities=23% Similarity=0.369 Sum_probs=111.4
Q ss_pred HHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC------CCCCccchHHHHHHHHHHhcC-CCcEEEecCC
Q 017718 215 KWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR------QLDYVPATIMALEEVVKATQG-RIPVFLDGGV 286 (367)
Q Consensus 215 ~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~------~~~~~~~~~~~l~~i~~~~~~-~~~via~GGI 286 (367)
+++|+.+ ++||++..+.+.+.++.++++|||+|.|.-.+|. ....|.|.+.++.++.++.+. .+|||+||||
T Consensus 314 ~~ik~~~p~~~viaGNVaT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI 393 (556)
T 4af0_A 314 KWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGI 393 (556)
T ss_dssp HHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCC
T ss_pred HHHHhhCCcceEEeccccCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCc
Confidence 3888877 6899999999999999999999999999654442 123467888999999877643 6999999999
Q ss_pred CCHHHHHHHHHcCCCEEEechHHH--------------------HHhhc-------------------------------
Q 017718 287 RRGTDVFKALALGASGIFIGRPVV--------------------YSLAA------------------------------- 315 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l~~------------------------------- 315 (367)
+++.|++|||++|||+||+|+.|- ++++.
T Consensus 394 ~~sGDi~KAlaaGAd~VMlGsllAGt~EsPGe~~~~~G~~~K~YrGMgS~~Am~~~~~~~~~~~~~~~~~~~~s~dRyfq 473 (556)
T 4af0_A 394 GNIGHIAKALALGASAVMMGGLLAGTTESPGEYFYHEGKRVKVYRGMGSIEAMEHTQRGSASGKRSILGLDNAATARYFS 473 (556)
T ss_dssp CSHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEEETTEEEEEEECTTSHHHHTTC------------CCSCSSEEECCC
T ss_pred CcchHHHHHhhcCCCEEEEchhhccccCCCCcEEEECCEEEEeecccccHHHHHhcccCCcccccccccccccchhhhcc
Confidence 999999999999999999999772 11110
Q ss_pred --------cCh-------HHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 316 --------EGE-------KGVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 316 --------~G~-------~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
+|. ..+.+++..|...|+..|.++|+++|.||+..
T Consensus 474 ~~~~~~v~EGveg~VpykG~v~~~i~~l~gGlrs~m~y~Ga~~i~el~~~ 523 (556)
T 4af0_A 474 EADAVKVAQGVSGDVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSC 523 (556)
T ss_dssp BSSSSCBCCBCEEEEECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHH
T ss_pred cccccccCCccEEeccCCCcHHHHHHHHHHHHHHhhhccCCCcHHHHHHh
Confidence 010 02789999999999999999999999999864
No 34
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.84 E-value=1e-19 Score=177.82 Aligned_cols=243 Identities=17% Similarity=0.118 Sum_probs=155.5
Q ss_pred CCCCCccceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCCCC---------------------
Q 017718 55 DVSKIDMNTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTS--------------------- 112 (367)
Q Consensus 55 ~~~~vd~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~~~--------------------- 112 (367)
+-.+.+++|+++|++|++||++|+-.+. .+....+++.+.|..+++ +|.+..
T Consensus 31 g~~~~~L~v~~~Gl~f~NPvglAaG~~~------~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~ 104 (354)
T 3tjx_A 31 GRGSMSLQVNLLNNTFANPFMNAAGVMC------TTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp --CCCCCCEEETTEEESSSEEECTTSSC------SSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCceeEEECCEEcCCCcEEccCCCC------CCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEccccccccc
Confidence 3457899999999999999999972222 256788888888888664 332111
Q ss_pred -----CHH----HHHhhC---CCceEEEEeecCCHHHHHHHHHHHHH---cCCcEEEEecCCCCCCchhHHhhhhcCCCC
Q 017718 113 -----SVE----EVASTG---PGIRFFQLYVYKDRNVVAQLVRRAER---AGFKAIALTVDTPRLGRREADIKNRFTLPP 177 (367)
Q Consensus 113 -----~~e----~i~~~~---~~~~~~QLy~~~d~~~~~~~l~ra~~---~G~~ai~itvd~p~~g~r~~~~~~~~~~p~ 177 (367)
..+ ++.+.. ..+..+++. ..+.+...+..+++.+ .+++++.+|+.||.. |.
T Consensus 105 G~~n~G~~~~~~~~~~~~~~~~~pvivsi~-g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~-------------~g 170 (354)
T 3tjx_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV-------------PG 170 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECC-------------------
T ss_pred ccCCHHHHHHHHHHHHhhccCCceEEEEEe-cCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCC-------------cc
Confidence 122 222221 146677776 4455555555555443 478889999999862 10
Q ss_pred ccccccccccccCccccccchhhHHHhhhccCccc--cH-HHHHhhcCCCEEEEecCCH------HHHHHHHHcC-CcEE
Q 017718 178 FLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--SW-KWLQTITKLPILVKGVLTA------EDARIAVQAG-AAGI 247 (367)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~-~~l~~~~~~Pv~vK~v~~~------~~a~~~~~~G-~d~i 247 (367)
+ +. +. .+++. .. +++++.++.|+.+|..... ..+..+.+.+ ++++
T Consensus 171 ~---~~--------------------l~--~~~~~~~~i~~~v~~~~~~pv~vK~~p~~~~~~~~~~~~~~~~~~~~~~i 225 (354)
T 3tjx_A 171 K---PQ--------------------VA--YDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAAFDAAAEILNEFPKVQFI 225 (354)
T ss_dssp --------------------------CT--TSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEE
T ss_pred h---hh--------------------hc--cCHHHHHHHHHHHHHHhhcccccccCCCCCchhHHHHHHHHHhhcccchh
Confidence 0 00 00 01111 11 2777888999999998532 1233444444 4444
Q ss_pred EEcCCCC-------------------CCCCCccchH----HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEE
Q 017718 248 IVSNHGA-------------------RQLDYVPATI----MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 304 (367)
Q Consensus 248 ~vs~~gg-------------------~~~~~~~~~~----~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ 304 (367)
...|+-. .+..+|++.+ +.+.++++.. .++|||++|||.|++|++++|.+|||+||
T Consensus 226 ~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~-~~~pIIg~GGI~s~~Da~e~i~aGAs~Vq 304 (354)
T 3tjx_A 226 TCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRC-PGKLIFGCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp EECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHHHHHTEEEEE
T ss_pred heecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhc-CCCcEEEeCCcCCHHHHHHHHHcCCCEEE
Confidence 4433211 0112344443 3455555544 37899999999999999999999999999
Q ss_pred echHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 305 IGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 305 ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
|||+++| +|+. ++..+++||+.+|+..|++|++|+++..
T Consensus 305 v~Ta~~y----~GP~----~~~~I~~~L~~~L~~~G~~si~e~~G~~ 343 (354)
T 3tjx_A 305 VGTALQE----EGPS----IFERLTSELLGVMAKKRYQTLDEFRGKV 343 (354)
T ss_dssp ECHHHHH----HCTT----HHHHHHHHHHHHHHHHTCCSGGGTTTCC
T ss_pred EChhhhh----cCch----HHHHHHHHHHHHHHHcCCCCHHHHhChh
Confidence 9999988 3775 6788999999999999999999999864
No 35
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=99.84 E-value=2e-19 Score=175.50 Aligned_cols=238 Identities=18% Similarity=0.214 Sum_probs=169.8
Q ss_pred eccceEeCcccchhccCChhhHHHHHHHHHcCC-ceeecCCCCCC------HHHHHhhCC--CceEEEEeecCCHHHHHH
Q 017718 70 ISMPIMIAPTAMQKMAHPEGEYATARAASAAGT-IMTLSSWSTSS------VEEVASTGP--GIRFFQLYVYKDRNVVAQ 140 (367)
Q Consensus 70 l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~-~~~vs~~~~~~------~e~i~~~~~--~~~~~QLy~~~d~~~~~~ 140 (367)
+++||++|||++.+ +..++..+++.|. .++++++.+.. .+++.+..+ .+.++||+ +.+++...+
T Consensus 2 l~nriv~APM~g~t------d~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~ 74 (350)
T 3b0p_A 2 LDPRLSVAPMVDRT------DRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAE 74 (350)
T ss_dssp CCCSEEECCCTTTS------SHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHH
T ss_pred CCCCEEECCCCCCC------HHHHHHHHHHcCCCCEEEeCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHH
Confidence 67899999998643 7788889999986 77788774321 113333333 68999998 778999999
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccH---HHH
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSW---KWL 217 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~l 217 (367)
.+++++++|++.|.||++||..-.|. .++ ++ .+.. ++.+-. +.+
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~~~~----d~~-----------------------G~----~l~~--~~~~~~eiv~av 121 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEKAQE----GGY-----------------------GA----CLLL--DLARVREILKAM 121 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHHHHH----TTC-----------------------GG----GGGG--CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCcCcC----CCc-----------------------ch----hHHh--CHHHHHHHHHHH
Confidence 99999999999999999999742221 011 00 1111 333322 377
Q ss_pred HhhcCCCEEEEecCC----------HHHHHHHHHcCCcEEEEcCCCCCC---CC------CccchHHHHHHHHHHhcCCC
Q 017718 218 QTITKLPILVKGVLT----------AEDARIAVQAGAAGIIVSNHGARQ---LD------YVPATIMALEEVVKATQGRI 278 (367)
Q Consensus 218 ~~~~~~Pv~vK~v~~----------~~~a~~~~~~G~d~i~vs~~gg~~---~~------~~~~~~~~l~~i~~~~~~~~ 278 (367)
++.+++||++|.... .+.++.+.++|+|+|+|++ ++. .. ..+..++.+.++++.++ ++
T Consensus 122 ~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~--r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~i 198 (350)
T 3b0p_A 122 GEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHA--RSALLALSTKANREIPPLRHDWVHRLKGDFP-QL 198 (350)
T ss_dssp HHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEEC--SCBC----------CCCCCHHHHHHHHHHCT-TS
T ss_pred HHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEec--CchhcccCcccccCCCcccHHHHHHHHHhCC-CC
Confidence 887899999998632 3457899999999999964 321 11 11246888888888763 79
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHh-----h---ccC---hHHHHHHHHHHHHHHHHHHHHhCCCChhhh
Q 017718 279 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSL-----A---AEG---EKGVRRVLEMLREEFELAMALSGCRSLKEI 347 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l-----~---~~G---~~~v~~~i~~l~~el~~~m~~~G~~si~~l 347 (367)
|||++|||+|++|+.++++ |||+||+||+++..- . ..| .....+.++.+.++++..+. .|. .+.++
T Consensus 199 PVianGgI~s~eda~~~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~ 275 (350)
T 3b0p_A 199 TFVTNGGIRSLEEALFHLK-RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT-PPWAV 275 (350)
T ss_dssp EEEEESSCCSHHHHHHHHT-TSSEEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC-CHHHH
T ss_pred eEEEECCcCCHHHHHHHHh-CCCEEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-cCc-cHHHH
Confidence 9999999999999999998 999999999886421 0 112 12345677788888887777 465 68888
Q ss_pred ccccee
Q 017718 348 TRDHIV 353 (367)
Q Consensus 348 ~~~~l~ 353 (367)
+++..+
T Consensus 276 ~kh~~~ 281 (350)
T 3b0p_A 276 LRHMLN 281 (350)
T ss_dssp HTTSTT
T ss_pred HHHHHH
Confidence 887664
No 36
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.84 E-value=2.2e-19 Score=183.30 Aligned_cols=135 Identities=24% Similarity=0.339 Sum_probs=109.6
Q ss_pred HHHhhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccchHHHHHHHHHHhcC-CCcEEEecCCC
Q 017718 216 WLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~~~via~GGI~ 287 (367)
++++.++ +||+++.+.+.++|+.+.++|+|+|+++.++|.- ...+.+.+..+.++.+.++. ++|||++|||+
T Consensus 290 ~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~ 369 (511)
T 3usb_A 290 EVRAKYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIK 369 (511)
T ss_dssp HHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC
T ss_pred HHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCC
Confidence 7888774 8999999999999999999999999996554431 13457888899888776643 69999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHH--------------------Hhhc----------------------cChHH-----
Q 017718 288 RGTDVFKALALGASGIFIGRPVVY--------------------SLAA----------------------EGEKG----- 320 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~~----------------------~G~~~----- 320 (367)
++.|+.|++++|||+|++||+|+. +++. +|.++
T Consensus 370 ~~~di~kala~GA~~V~vGs~~~~~~es~g~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~eG~~~~~~~~ 449 (511)
T 3usb_A 370 YSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKDRYFQEGNKKLVPEGIEGRVPYK 449 (511)
T ss_dssp SHHHHHHHHHTTCSEEEESTTTTTBTTSSSCEEECSSSEEEC----------------------------------CBCC
T ss_pred CHHHHHHHHHhCchhheecHHHhcCccCchhhhhccCeeeeeeeccccHHHHhcccccchhccccccccCCCcEEeCCCC
Confidence 999999999999999999999743 3322 12222
Q ss_pred --HHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 321 --VRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 321 --v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
+.++++.|..+|+..|.++|++++.||+..
T Consensus 450 ~~~~~~~~~~~~~lr~~m~~~G~~~i~~l~~~ 481 (511)
T 3usb_A 450 GPLADTVHQLVGGLRAGMGYCGAQDLEFLREN 481 (511)
T ss_dssp BCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCcccHHHHHhC
Confidence 678999999999999999999999999854
No 37
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.83 E-value=9.2e-19 Score=177.97 Aligned_cols=136 Identities=23% Similarity=0.404 Sum_probs=110.8
Q ss_pred HHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccchHHHHHHHHHHhcC-CCcEEEecCC
Q 017718 215 KWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGV 286 (367)
Q Consensus 215 ~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~~~via~GGI 286 (367)
+++++.+ ++||+++.+.+.++|+.+.++|+|+|.+++.+|.. ...+.+.++.+.++++.++. ++|||++|||
T Consensus 262 ~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI 341 (490)
T 4avf_A 262 RWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGI 341 (490)
T ss_dssp HHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCC
T ss_pred HHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCC
Confidence 3788887 78999999999999999999999999996544431 23567899999999887643 6999999999
Q ss_pred CCHHHHHHHHHcCCCEEEechHHH--------------------HHhhc---------------------------cChH
Q 017718 287 RRGTDVFKALALGASGIFIGRPVV--------------------YSLAA---------------------------EGEK 319 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l--------------------~~l~~---------------------------~G~~ 319 (367)
+++.|+.|++++|||+||+|++|+ |++++ +|.+
T Consensus 342 ~~~~di~kal~~GAd~V~vGs~~~~~~Esp~~~~~~~g~~~k~~~gm~s~~a~~~~~~~~~r~~~~~~~~~~~~~~eg~~ 421 (490)
T 4avf_A 342 RFSGDLAKAMVAGAYCVMMGSMFAGTEEAPGEIELFQGRSYKSYRGMGSLGAMSGSQGSSDRYFQDASAGAEKLVPEGIE 421 (490)
T ss_dssp CSHHHHHHHHHHTCSEEEECTTTTTBTTSSSCEEEETTEEEEC-------------------------------------
T ss_pred CCHHHHHHHHHcCCCeeeecHHHhcCCCCCCceEeECCeEeeeecCcccHHHHhhcccccchhhcccccccccccCCCcE
Confidence 999999999999999999999874 23221 1111
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 320 -------GVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 320 -------~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
.+.+++..|..+|+..|.++|+++|.||+..
T Consensus 422 ~~v~~~g~~~~~~~~~~~~lr~~~~~~g~~~i~~l~~~ 459 (490)
T 4avf_A 422 GRVPYKGALSAIVHQLMGGLRAAMGYTGSADIQQMRTQ 459 (490)
T ss_dssp --CBCCBCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHS
T ss_pred EcCCcCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 3668999999999999999999999999864
No 38
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.82 E-value=1.4e-18 Score=176.84 Aligned_cols=136 Identities=25% Similarity=0.427 Sum_probs=113.0
Q ss_pred HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC-----C-CCccchHHHHHHHHHHhcC-CCcEEEecCCC
Q 017718 216 WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-----L-DYVPATIMALEEVVKATQG-RIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~-----~-~~~~~~~~~l~~i~~~~~~-~~~via~GGI~ 287 (367)
++++.+ ++||+++.+.+.++++.+.++|+|+|+++++||+. . ..+.++...++++.+.++. ++|||++|||+
T Consensus 271 ~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~ 350 (494)
T 1vrd_A 271 MIKADYPDLPVVAGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIR 350 (494)
T ss_dssp HHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCC
T ss_pred HHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcC
Confidence 888888 79999999999999999999999999999887631 1 2356788888888877543 79999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHH--------------------Hhhc-----cC--------------hHH--------
Q 017718 288 RGTDVFKALALGASGIFIGRPVVY--------------------SLAA-----EG--------------EKG-------- 320 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~~-----~G--------------~~~-------- 320 (367)
++.|+.|+|++|||+|++||+|+. ++++ .| ++|
T Consensus 351 ~~~di~kala~GAd~V~iGr~~l~~~e~~~~~~~~~~~~~k~~~g~~~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (494)
T 1vrd_A 351 YSGDIVKALAAGAESVMVGSIFAGTEEAPGETILYQGRKYKAYRGMGSLGAMRSGSADRYGQEGENKFVPEGIEGMVPYK 430 (494)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHTBTTSSSEEEEETTEEEEECBCCC-------------------------CBCCEECC
T ss_pred CHHHHHHHHHcCCCEEEECHHHhcCCcCCcceEEECCEEEEEEeccchHHHHhhccccchhhcccccccCCcceEccCcC
Confidence 999999999999999999999972 2211 00 233
Q ss_pred --HHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 321 --VRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 321 --v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
+.++++.+..+|+..|.++|+.++.+|++..
T Consensus 431 ~~v~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~ 463 (494)
T 1vrd_A 431 GTVKDVVHQLVGGLRSGMGYIGARTIKELQEKA 463 (494)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCHHHHHhhC
Confidence 6799999999999999999999999998653
No 39
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.81 E-value=1.9e-18 Score=175.86 Aligned_cols=135 Identities=24% Similarity=0.336 Sum_probs=111.4
Q ss_pred HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccchHHHHHHHHHHhcC-CCcEEEecCCC
Q 017718 216 WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQG-RIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~~~~l~~i~~~~~~-~~~via~GGI~ 287 (367)
++++.+ ++||+++.+.+.+.|+.+.++|+|+|++++.+|.. ...+.+.+..+.++.+.++. .+|||++|||+
T Consensus 265 ~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~ 344 (496)
T 4fxs_A 265 ETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIR 344 (496)
T ss_dssp HHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred HHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCC
Confidence 788887 79999999999999999999999999997544321 12457788999999887643 69999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHHHhhcc--------------------------------------------Ch-----
Q 017718 288 RGTDVFKALALGASGIFIGRPVVYSLAAE--------------------------------------------GE----- 318 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~~l~~~--------------------------------------------G~----- 318 (367)
++.|+.|++++|||+||+||+|+....+. |.
T Consensus 345 ~~~di~kala~GAd~V~iGs~f~~t~Espg~~~~~~g~~~k~~~gm~s~~a~~~~~~~r~~~~~~~~~~~~~eg~~~~v~ 424 (496)
T 4fxs_A 345 FSGDISKAIAAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSKGSSDRYFQTDNAADKLVPEGIEGRIA 424 (496)
T ss_dssp SHHHHHHHHHTTCSEEEESTTTTTBTTSSSCCEESSSCEEEEEECTTSHHHHHSSSCCSTTTC---CCCCCCSBCEEEEE
T ss_pred CHHHHHHHHHcCCCeEEecHHHhcCCCCCcceeeeCCeEeeeecccchHHHHhccccccccccccccccccCCccEEeCC
Confidence 99999999999999999999884321110 10
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 319 --KGVRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 319 --~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
..+.+++..|..+|+..|.++|+++|.||+..
T Consensus 425 ~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~l~~~ 458 (496)
T 4fxs_A 425 YKGHLKEIIHQQMGGLRSCMGLTGSATVEDLRTK 458 (496)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCcCcHHHHHhC
Confidence 13779999999999999999999999999853
No 40
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.77 E-value=1.3e-17 Score=169.63 Aligned_cols=137 Identities=18% Similarity=0.272 Sum_probs=113.1
Q ss_pred HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccchHHHHHHHHHHhc-CCCcEEEecCCC
Q 017718 216 WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~~~~~l~~i~~~~~-~~~~via~GGI~ 287 (367)
++++.+ ++|++.+++.+.++++.+.++|+|+|.+++.+|.. ..++.+..+.+.++..... .++|||++|||+
T Consensus 267 ~l~~~~p~~pvi~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~ 346 (491)
T 1zfj_A 267 EIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIK 346 (491)
T ss_dssp HHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred HHHHHCCCCcEeCCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCC
Confidence 788888 89999999999999999999999999998755532 1235678888888876543 379999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHH--------------------Hhh-------------------------ccChHH--
Q 017718 288 RGTDVFKALALGASGIFIGRPVVY--------------------SLA-------------------------AEGEKG-- 320 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~-------------------------~~G~~~-- 320 (367)
++.|+.|++++|||+|++||+|+. +++ .+|.++
T Consensus 347 ~~~di~kal~~GA~~v~vG~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 426 (491)
T 1zfj_A 347 YSGDIVKALAAGGNAVMLGSMFAGTDEAPGETEIYQGRKYKTYRGMGSIAAMKKGSSDRYFQGSVNEANKLVPEGIEGRV 426 (491)
T ss_dssp SHHHHHHHHHTTCSEEEESTTTTTBSSCCCCEEEETTEEEEEEECTTSHHHHCC--------------CCCCCSBCEEEE
T ss_pred CHHHHHHHHHcCCcceeeCHHhhCCCcCcceEEEECCEEEEEEecccCHHHHhccccccccccccccccccCcCcceEec
Confidence 999999999999999999999972 111 112111
Q ss_pred -----HHHHHHHHHHHHHHHHHHhCCCChhhhcccce
Q 017718 321 -----VRRVLEMLREEFELAMALSGCRSLKEITRDHI 352 (367)
Q Consensus 321 -----v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l 352 (367)
+.++++.|..||+..|.++|+.++.+|+....
T Consensus 427 ~~~~~~~~~~~~l~~~l~~~~~~~G~~~~~~l~~~~~ 463 (491)
T 1zfj_A 427 AYKGAASDIVFQMLGGIRSGMGYVGAGDIQELHENAQ 463 (491)
T ss_dssp ECCBCHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHCC
T ss_pred CcCCCHHHHHHHHHHHHHHHhhhcCcccHHHHHhcCc
Confidence 88999999999999999999999999986533
No 41
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.76 E-value=1.2e-17 Score=170.94 Aligned_cols=134 Identities=23% Similarity=0.365 Sum_probs=105.1
Q ss_pred HHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC------CCCccc---hHHHHHHHHHHhcCCCcEEEec
Q 017718 215 KWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ------LDYVPA---TIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 215 ~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~---~~~~l~~i~~~~~~~~~via~G 284 (367)
+++++.+ ++||++|.+.+.++|+.+.++|+|+|++++|+|.. .+++.+ .+..++++++.+ ++|||++|
T Consensus 288 ~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~G 365 (514)
T 1jcn_A 288 HYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADG 365 (514)
T ss_dssp HHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEES
T ss_pred HHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEEC
Confidence 3788887 89999999999999999999999999997764421 123433 445555655544 79999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEechHHHH--------------------Hhhc---------------------cChHHH--
Q 017718 285 GVRRGTDVFKALALGASGIFIGRPVVY--------------------SLAA---------------------EGEKGV-- 321 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~~---------------------~G~~~v-- 321 (367)
||+++.|+.|++++|||+|++||+|+. ++.. .+++|+
T Consensus 366 GI~~~~di~kala~GAd~V~iG~~~l~~~e~~~~~~~~~g~~~k~~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 445 (514)
T 1jcn_A 366 GIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSG 445 (514)
T ss_dssp CCCSHHHHHHHHHTTCSEEEESTTTTTSTTSSCC----------------------------------------------
T ss_pred CCCCHHHHHHHHHcCCCeeeECHHHHcCCcCCcceEeECCEEEEEecCcCCHHHHhhccccchhhccccccceeccccee
Confidence 999999999999999999999998853 1110 022444
Q ss_pred --------HHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 322 --------RRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 322 --------~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
.++++.|..||+..|.++|+++++||++.
T Consensus 446 ~~~~~g~~~~~i~~l~~~l~~~m~~~G~~~i~~l~~~ 482 (514)
T 1jcn_A 446 SIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSM 482 (514)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHTCSBHHHHHHH
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHhhCcccHHHHHhh
Confidence 89999999999999999999999999975
No 42
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.75 E-value=2.5e-17 Score=167.38 Aligned_cols=132 Identities=23% Similarity=0.335 Sum_probs=105.3
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC-------CCCccchHHHHHHHHHHhc-CCCcEEEecCCC
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ-------LDYVPATIMALEEVVKATQ-GRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~-------~~~~~~~~~~l~~i~~~~~-~~~~via~GGI~ 287 (367)
++++.+++|+++|++.+.++++.+. |+|+|.+ +.|+.. ..+|.++...+.++.+... .++|||++|||+
T Consensus 262 ~l~~~~~vpvi~k~v~~~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~ 338 (486)
T 2cu0_A 262 EMRQKVDADFIVGNIANPKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIR 338 (486)
T ss_dssp HHHHTCCSEEEEEEECCHHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCC
T ss_pred HHHHHhCCccccCCcCCHHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCC
Confidence 7888889999999999999998888 9999999 555432 2345556666555544332 179999999999
Q ss_pred CHHHHHHHHHcCCCEEEechHHHH--------------------Hhhc-------------------------cChHH--
Q 017718 288 RGTDVFKALALGASGIFIGRPVVY--------------------SLAA-------------------------EGEKG-- 320 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~ig~~~l~--------------------~l~~-------------------------~G~~~-- 320 (367)
++.|++|+|++|||+|++|++|+. ++++ +|.++
T Consensus 339 ~~~di~kalalGA~~v~~g~~~~~~~e~~~~~~~~~g~~~k~~~g~~~~~a~~~~~~~r~~~g~~~~~~~~~~~g~~~~~ 418 (486)
T 2cu0_A 339 YSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVIINGRKYKQYRGMGSLGAMMKGGAERYYQGGYMKTRKFVPEGVEGVV 418 (486)
T ss_dssp SHHHHHHHHHTTCSEEEESTTTTTBTTCCSCEEEETTEEEEEEECTTSHHHHTC----------CCCCSCSSCCBCEEEE
T ss_pred CHHHHHHHHHcCCCceeeChhhhcCccCchhheeeCCcEEEEeecCCCHHHHhcccccccccccccccccccccceEEee
Confidence 999999999999999999999983 1111 22211
Q ss_pred -----HHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 017718 321 -----VRRVLEMLREEFELAMALSGCRSLKEITRD 350 (367)
Q Consensus 321 -----v~~~i~~l~~el~~~m~~~G~~si~~l~~~ 350 (367)
+.++++.|..+|+..|.++|+.++.+|+..
T Consensus 419 ~~~~~~~~~~~~l~~~lr~~m~~~G~~~~~~l~~~ 453 (486)
T 2cu0_A 419 PYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEK 453 (486)
T ss_dssp ECCBCHHHHHHHHHHHHHHHHHHTTCSBHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHhcccCCcCCHHHHHhh
Confidence 889999999999999999999999999854
No 43
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.72 E-value=2.9e-16 Score=152.11 Aligned_cols=184 Identities=20% Similarity=0.228 Sum_probs=136.3
Q ss_pred eEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHH-------HhhCCCceEEEEeecCCHH
Q 017718 64 TVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYKDRN 136 (367)
Q Consensus 64 ~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i-------~~~~~~~~~~QLy~~~d~~ 136 (367)
+++| ++.||+.+||++.+ +..++.++.+.|...++... ..+.+++ .+....++.+|++.. +++
T Consensus 7 ~~l~--~~~Pii~apM~g~s------~~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~~~p~gvnl~~~-~~~ 76 (332)
T 2z6i_A 7 ELLK--IDYPIFQGGMAWVA------DGDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLTDKPFGVNIMLL-SPF 76 (332)
T ss_dssp HHHT--CSSSEEECCCTTTC------CHHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHCCSCEEEEECTT-STT
T ss_pred HHhC--CCCCEEeCCCCCCC------cHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEecCC-CCC
Confidence 3455 78899999998542 46799999999974334322 2233332 222235788999852 332
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHH
Q 017718 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKW 216 (367)
Q Consensus 137 ~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 216 (367)
..+.++++.++|++.+.++.++|.. ..++
T Consensus 77 -~~~~~~~a~~~g~d~V~~~~g~p~~--------------------------------------------------~i~~ 105 (332)
T 2z6i_A 77 -VEDIVDLVIEEGVKVVTTGAGNPSK--------------------------------------------------YMER 105 (332)
T ss_dssp -HHHHHHHHHHTTCSEEEECSSCGGG--------------------------------------------------THHH
T ss_pred -HHHHHHHHHHCCCCEEEECCCChHH--------------------------------------------------HHHH
Confidence 4567888999999999987765420 1124
Q ss_pred HHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCC--CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 217 LQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 217 l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
+++ .++||++|. .+.++++.+.++|+|+|++++. ||+. +..++++.++++++.+ ++|||++|||.+++|+.+
T Consensus 106 l~~-~g~~v~~~v-~~~~~a~~~~~~GaD~i~v~g~~~GG~~--g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~ 179 (332)
T 2z6i_A 106 FHE-AGIIVIPVV-PSVALAKRMEKIGADAVIAEGMEAGGHI--GKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAA 179 (332)
T ss_dssp HHH-TTCEEEEEE-SSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHH
T ss_pred HHH-cCCeEEEEe-CCHHHHHHHHHcCCCEEEEECCCCCCCC--CCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHH
Confidence 554 478999884 6889999999999999999764 4432 2356888999998877 799999999999999999
Q ss_pred HHHcCCCEEEechHHHHHhh
Q 017718 295 ALALGASGIFIGRPVVYSLA 314 (367)
Q Consensus 295 al~lGAd~V~ig~~~l~~l~ 314 (367)
++++|||+|++||+|+....
T Consensus 180 al~~GAdgV~vGs~~l~~~e 199 (332)
T 2z6i_A 180 GFMLGAEAVQVGTRFVVAKE 199 (332)
T ss_dssp HHHTTCSEEEECHHHHTBTT
T ss_pred HHHcCCCEEEecHHHhcCcc
Confidence 99999999999999987543
No 44
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.72 E-value=5.3e-16 Score=149.88 Aligned_cols=194 Identities=19% Similarity=0.226 Sum_probs=138.8
Q ss_pred eeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHH-------HhhCCCceEEEEeecC--
Q 017718 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV-------ASTGPGIRFFQLYVYK-- 133 (367)
Q Consensus 63 t~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i-------~~~~~~~~~~QLy~~~-- 133 (367)
+++|+ ++.||+.+||++.+ +..++.++.+.|...++......+.+++ .+....|+.++++...
T Consensus 9 ~~~l~--~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~ 80 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQWVG------RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQ 80 (328)
T ss_dssp HHHHT--CSSSEEECCCTTTC------SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS
T ss_pred HHHhC--CCCCEEECCCCCCC------cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence 34555 67899999997643 5689999999996555543222224432 2223357788888641
Q ss_pred -CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 134 -DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 134 -d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
+++ ..+.++.+.+.|++.+.++.++|. +
T Consensus 81 ~~~~-~~~~~~~~~~~g~d~V~~~~g~p~------~-------------------------------------------- 109 (328)
T 2gjl_A 81 KPVP-YAEYRAAIIEAGIRVVETAGNDPG------E-------------------------------------------- 109 (328)
T ss_dssp SCCC-HHHHHHHHHHTTCCEEEEEESCCH------H--------------------------------------------
T ss_pred cCcc-HHHHHHHHHhcCCCEEEEcCCCcH------H--------------------------------------------
Confidence 222 456788888999999988776541 0
Q ss_pred cHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCC--CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 213 SWKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 213 ~~~~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
..+++++. ++|++.+ +.+.++++.+.++|+|+|++++. ||+......++++.++++++.+ ++|||++|||++++
T Consensus 110 ~~~~l~~~-gi~vi~~-v~t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~ 185 (328)
T 2gjl_A 110 HIAEFRRH-GVKVIHK-CTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGR 185 (328)
T ss_dssp HHHHHHHT-TCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHH
T ss_pred HHHHHHHc-CCCEEee-CCCHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHH
Confidence 01245543 7888754 67899999999999999999763 4432212357888999988765 79999999999999
Q ss_pred HHHHHHHcCCCEEEechHHHHHhhccChH
Q 017718 291 DVFKALALGASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l~~l~~~G~~ 319 (367)
|+.+++++|||+|++||+|+....+.+.+
T Consensus 186 ~v~~al~~GAdgV~vGs~~~~~~e~~~~~ 214 (328)
T 2gjl_A 186 GLVAALALGADAINMGTRFLATRECPIHP 214 (328)
T ss_dssp HHHHHHHHTCSEEEESHHHHTSSSSCSCH
T ss_pred HHHHHHHcCCCEEEECHHHHcCccccccH
Confidence 99999999999999999998765444443
No 45
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.71 E-value=4.5e-16 Score=150.40 Aligned_cols=187 Identities=20% Similarity=0.265 Sum_probs=136.5
Q ss_pred eeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-------hhCCCceEEEEeecCCHHHHHH
Q 017718 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (367)
Q Consensus 68 ~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~-------~~~~~~~~~QLy~~~d~~~~~~ 140 (367)
+.++.||+.+||++.+ +..++.++.+.|...+++.. ..+.+++. +....|+.++++.. ++. ..+
T Consensus 23 l~~~~Pii~apM~gvs------~~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~~-~~~ 93 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAG------TPTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SPW-ADD 93 (326)
T ss_dssp HTCSSSEEECCCTTTS------CHHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-STT-HHH
T ss_pred cCCCCCEEECCCCCCC------CHHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CCC-HHH
Confidence 3478899999998643 56899999999975555322 23444322 22224677887642 222 356
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhh
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTI 220 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 220 (367)
.++.+.+.|++.+.++.++|.. ..+++++
T Consensus 94 ~~~~~~~~g~d~V~l~~g~p~~--------------------------------------------------~~~~l~~- 122 (326)
T 3bo9_A 94 LVKVCIEEKVPVVTFGAGNPTK--------------------------------------------------YIRELKE- 122 (326)
T ss_dssp HHHHHHHTTCSEEEEESSCCHH--------------------------------------------------HHHHHHH-
T ss_pred HHHHHHHCCCCEEEECCCCcHH--------------------------------------------------HHHHHHH-
Confidence 7788888999999887765410 0124444
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcC--CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~--~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
.++|+++ .+.+.++++.+.++|+|+|++++ +||++ +..++++.++++++.+ ++|||++|||++++|+.+++++
T Consensus 123 ~g~~v~~-~v~s~~~a~~a~~~GaD~i~v~g~~~GG~~--G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~ 197 (326)
T 3bo9_A 123 NGTKVIP-VVASDSLARMVERAGADAVIAEGMESGGHI--GEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFAL 197 (326)
T ss_dssp TTCEEEE-EESSHHHHHHHHHTTCSCEEEECTTSSEEC--CSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHH
T ss_pred cCCcEEE-EcCCHHHHHHHHHcCCCEEEEECCCCCccC--CCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHh
Confidence 4677765 46789999999999999999987 45543 2357889999998877 7999999999999999999999
Q ss_pred CCCEEEechHHHHHhhccChH
Q 017718 299 GASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 299 GAd~V~ig~~~l~~l~~~G~~ 319 (367)
||++|++||+|+....+.+.+
T Consensus 198 GA~gV~vGs~~~~~~e~~~~~ 218 (326)
T 3bo9_A 198 GAEAVQMGTRFVASVESDVHP 218 (326)
T ss_dssp TCSEEEESHHHHTBSSCCSCH
T ss_pred CCCEEEechHHHcCccccccH
Confidence 999999999998765444333
No 46
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.63 E-value=2.8e-14 Score=140.05 Aligned_cols=94 Identities=30% Similarity=0.392 Sum_probs=75.1
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCC--CCC---CCCCc------cchHHHHHHHHHHhcCCCcEEEec
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GAR---QLDYV------PATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~--gg~---~~~~~------~~~~~~l~~i~~~~~~~~~via~G 284 (367)
++++ .++||+++ +.+.++++.+.++|+|+|++++. ||+ ..... ...++.++++++.+ ++|||++|
T Consensus 140 ~~~~-~g~~v~~~-v~t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaG 215 (369)
T 3bw2_A 140 RLRR-AGTLTLVT-ATTPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAG 215 (369)
T ss_dssp HHHH-TTCEEEEE-ESSHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEES
T ss_pred HHHH-CCCeEEEE-CCCHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEEC
Confidence 5554 47787664 57899999999999999999763 332 21111 23588899988776 89999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEechHHHHHh
Q 017718 285 GVRRGTDVFKALALGASGIFIGRPVVYSL 313 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V~ig~~~l~~l 313 (367)
||.+++++.+++++|||+|++||+|+...
T Consensus 216 GI~~~~~~~~~l~~GAd~V~vGs~~~~~~ 244 (369)
T 3bw2_A 216 GIMRGGQIAAVLAAGADAAQLGTAFLATD 244 (369)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESHHHHTST
T ss_pred CCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 99999999999999999999999998643
No 47
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.59 E-value=1.5e-13 Score=133.41 Aligned_cols=224 Identities=18% Similarity=0.174 Sum_probs=141.1
Q ss_pred ceeEcCeeeccceEeCcccchhccCChh---hH--HHHHHHHHcCCceeecCCCCC--------------CHH------H
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG---EY--ATARAASAAGTIMTLSSWSTS--------------SVE------E 116 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l~~~~~---e~--~~a~aa~~~G~~~~vs~~~~~--------------~~e------~ 116 (367)
..+|.+.+++++|++|||+...-..+++ +. ..-+.-++-|+.++++++... +.+ +
T Consensus 8 p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~ 87 (338)
T 1z41_A 8 PITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAK 87 (338)
T ss_dssp CEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHH
T ss_pred CeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHH
Confidence 4788999999999999998654210121 22 222222246788877654211 112 2
Q ss_pred HHh---hCCCceEEEEeecC----------------------CH------------HHHHHHHHHHHHcCCcEEEEecCC
Q 017718 117 VAS---TGPGIRFFQLYVYK----------------------DR------------NVVAQLVRRAERAGFKAIALTVDT 159 (367)
Q Consensus 117 i~~---~~~~~~~~QLy~~~----------------------d~------------~~~~~~l~ra~~~G~~ai~itvd~ 159 (367)
+.+ ....+.++||+-.. .+ +...+.+++++++||++|.||..|
T Consensus 88 ~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~ 167 (338)
T 1z41_A 88 LTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAH 167 (338)
T ss_dssp HHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECT
T ss_pred HHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecccc
Confidence 221 22357899997421 22 345566788889999999999987
Q ss_pred CCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhcCCCEEEEecC-----
Q 017718 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTITKLPILVKGVL----- 231 (367)
Q Consensus 160 p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~~~Pv~vK~v~----- 231 (367)
.. +-+.|--|.. +.+. + +-.++ + .. ...+. .+.+|+.++.||.+|+..
T Consensus 168 gy-------Ll~qFlsp~~-n~R~-d--------~yGGs-l----en--r~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 168 GY-------LIHEFLSPLS-NHRT-D--------EYGGS-P----EN--RYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp TS-------HHHHHHCTTT-CCCC-S--------TTSSS-H----HH--HHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred ch-------HHHHccCCCc-CCcC-c--------ccCcc-h----hh--hHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 43 2222211110 0000 0 00011 1 00 11221 237888889999999864
Q ss_pred ---CH----HHHHHHHHcCCcEEEEcCCCCC-C-CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-C
Q 017718 232 ---TA----EDARIAVQAGAAGIIVSNHGAR-Q-LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-A 300 (367)
Q Consensus 232 ---~~----~~a~~~~~~G~d~i~vs~~gg~-~-~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG-A 300 (367)
+. +.++.+.++|+|+|.+++.... + ...++ ..++.+.++++.+ ++|||++|||++++++.++|..| |
T Consensus 224 ~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G~a 301 (338)
T 1z41_A 224 KGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNGRA 301 (338)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcCCc
Confidence 23 3478899999999999763211 1 11222 2467788888887 89999999999999999999998 9
Q ss_pred CEEEechHHHH
Q 017718 301 SGIFIGRPVVY 311 (367)
Q Consensus 301 d~V~ig~~~l~ 311 (367)
|+|++||+++.
T Consensus 302 D~V~iGR~~i~ 312 (338)
T 1z41_A 302 DLIFIGRELLR 312 (338)
T ss_dssp SEEEECHHHHH
T ss_pred eEEeecHHHHh
Confidence 99999999985
No 48
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.48 E-value=1.2e-12 Score=128.27 Aligned_cols=220 Identities=17% Similarity=0.136 Sum_probs=141.4
Q ss_pred ceeEcCeeeccceEeCcccchhccCCh---hhHHHHHHHHHcCCceeecCCCCC--------------CHHH------HH
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l~~~~---~e~~~a~aa~~~G~~~~vs~~~~~--------------~~e~------i~ 118 (367)
..+|.+.++++.|++|||+...-..++ .+..+..-++++++.++++++... +.+. +.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 477899999999999999865421122 256677777777888877654211 2222 22
Q ss_pred h---hCCCceEEEEeec-----------------------------------------CCH------------HHHHHHH
Q 017718 119 S---TGPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (367)
Q Consensus 119 ~---~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~l 142 (367)
+ ....+.++||+-. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (365)
T 2gou_A 88 EAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAA 167 (365)
T ss_dssp HHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 1125678999730 112 3556677
Q ss_pred HHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHh
Q 017718 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQT 219 (367)
Q Consensus 143 ~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~ 219 (367)
++|+++||++|-||..|.. +-+.|--|. .+.+. + +-.++ + .. ...+. .+.+|+
T Consensus 168 ~~a~~aGfDgVeih~a~gY-------Ll~qFlsp~-~N~R~-D--------~yGGs-l----en--r~r~~~eiv~avr~ 223 (365)
T 2gou_A 168 LNAMEAGFDGIELHAANGY-------LINQFIDSE-ANNRS-D--------EYGGS-L----EN--RLRFLDEVVAALVD 223 (365)
T ss_dssp HHHHHTTCSEEEEECCTTS-------HHHHHHSGG-GCCCC-S--------TTSSS-H----HH--HTHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEecccch-------hHhhccCCC-ccCcC-c--------ccCcc-h----hh--hHHHHHHHHHHHHH
Confidence 8889999999999998743 112221111 00000 0 00011 1 00 12222 237888
Q ss_pred hcCC-CEEEEecCC-----------HHH----HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEE
Q 017718 220 ITKL-PILVKGVLT-----------AED----ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 220 ~~~~-Pv~vK~v~~-----------~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via 282 (367)
.++. ||.+|+... .++ ++.+.++|+|+|.+++.. .+..+ ..++.+.++++.+ ++|||+
T Consensus 224 ~vg~~pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~---~~~~~~~~~~~~~~i~~~~--~iPvi~ 298 (365)
T 2gou_A 224 AIGAERVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD---WDDAPDTPVSFKRALREAY--QGVLIY 298 (365)
T ss_dssp HHCGGGEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB---TTBCCCCCHHHHHHHHHHC--CSEEEE
T ss_pred HcCCCcEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC---cCCCCCccHHHHHHHHHHC--CCcEEE
Confidence 7743 999999852 233 788999999999997631 11111 1356778888877 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
+||| +++++.++|+.| ||+|++||+++.
T Consensus 299 ~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 299 AGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred eCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 9999 999999999998 999999999985
No 49
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.46 E-value=2.5e-12 Score=126.42 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=140.1
Q ss_pred cceeEcCeeeccceEeCcccchhccCCh---hhHHHHHHHHHcCCceeecCCCCC--------------CHHH------H
Q 017718 61 MNTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVEE------V 117 (367)
Q Consensus 61 ~st~i~g~~l~~Pi~iAPm~~~~l~~~~---~e~~~a~aa~~~G~~~~vs~~~~~--------------~~e~------i 117 (367)
...+|.+.++++.|++|||+...- ++ .+..+..-++++|+.++++++... +.+. +
T Consensus 13 ~P~~ig~~~l~NRiv~aPm~~~~a--~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l 90 (377)
T 2r14_A 13 TPLQLGSLSLPNRVIMAPLTRSRT--PDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGV 90 (377)
T ss_dssp SCEEETTEEESCSEEECCCCCCCC--TTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHH
T ss_pred CCeeECCEEecCCeEECCCcCCcC--CCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHHH
Confidence 347889999999999999986432 22 356777777777877777654211 2222 2
Q ss_pred Hh---hCCCceEEEEeec------------------------------------------CCH------------HHHHH
Q 017718 118 AS---TGPGIRFFQLYVY------------------------------------------KDR------------NVVAQ 140 (367)
Q Consensus 118 ~~---~~~~~~~~QLy~~------------------------------------------~d~------------~~~~~ 140 (367)
.+ ......++||+-. ..+ +...+
T Consensus 91 ~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~ 170 (377)
T 2r14_A 91 VEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQ 170 (377)
T ss_dssp HHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHH
Confidence 21 1235788999731 112 35566
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHH
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWL 217 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l 217 (367)
.+++|+++||++|-||..|-. +-+.|--|. .+.+. + +-.++ + .. ...+. .+.+
T Consensus 171 aA~~a~~aGfDgVEIh~a~GY-------Ll~QFlsp~-~N~R~-D--------~yGGs-l----en--R~r~~~eiv~aV 226 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANAC-------LPNQFLATG-TNRRT-D--------QYGGS-I----EN--RARFPLEVVDAV 226 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTC-------HHHHHHSTT-TCCCC-S--------TTSSS-H----HH--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCcccc-------hHHhccCCc-cccCC-C--------ccCcc-h----hh--chHHHHHHHHHH
Confidence 778889999999999998733 222221111 00000 0 00011 1 00 11222 2378
Q ss_pred HhhcC-CCEEEEecCC-----------HH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 218 QTITK-LPILVKGVLT-----------AE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 218 ~~~~~-~Pv~vK~v~~-----------~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
|+.++ .||.+|+... .+ .++.+.++|+|+|.+++....+...+ ..++.+.++++.+ ++|||
T Consensus 227 r~avg~~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi 303 (377)
T 2r14_A 227 AEVFGPERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLI 303 (377)
T ss_dssp HHHHCGGGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEE
T ss_pred HHHcCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEE
Confidence 88875 3999998632 23 37889999999999975221111111 1456677888877 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
++||| +++++.++|+.| ||+|++||+++.
T Consensus 304 ~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~ 333 (377)
T 2r14_A 304 YCGNY-DAGRAQARLDDNTADAVAFGRPFIA 333 (377)
T ss_dssp EESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred EECCC-CHHHHHHHHHCCCceEEeecHHHHh
Confidence 99999 699999999998 999999999985
No 50
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.46 E-value=6.5e-12 Score=122.94 Aligned_cols=221 Identities=15% Similarity=0.115 Sum_probs=142.4
Q ss_pred ceeEcCeeeccceEeCcccchhccCCh---hhHHHHHHHHHcCCceeecCCCCC--------------CHHH------HH
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKMAHPE---GEYATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l~~~~---~e~~~a~aa~~~G~~~~vs~~~~~--------------~~e~------i~ 118 (367)
..+|.+.++++.|++|||+...-..++ .+..+..-++++|+.++++++... +.+. +.
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 8 PLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 478899999999999999865321222 366777778888888887754211 2222 22
Q ss_pred h---hCCCceEEEEeec-----------------------------------------CCH------------HHHHHHH
Q 017718 119 S---TGPGIRFFQLYVY-----------------------------------------KDR------------NVVAQLV 142 (367)
Q Consensus 119 ~---~~~~~~~~QLy~~-----------------------------------------~d~------------~~~~~~l 142 (367)
+ ......++||+-. ..+ +...+.+
T Consensus 88 ~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA 167 (364)
T 1vyr_A 88 AGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAV 167 (364)
T ss_dssp HHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHH
Confidence 1 2235788999720 122 3456677
Q ss_pred HHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHh
Q 017718 143 RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQT 219 (367)
Q Consensus 143 ~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~ 219 (367)
++|+++||++|-||..|.. +-+.|--|. .+.+. + +-.++ + .. ...+. .+.+|+
T Consensus 168 ~~a~~aGfDgVeih~a~Gy-------Ll~qFlsp~-~N~R~-D--------~yGGs-l----en--r~r~~~eiv~avr~ 223 (364)
T 1vyr_A 168 ANAREAGFDLVELHSAHGY-------LLHQFLSPS-SNQRT-D--------QYGGS-V----EN--RARLVLEVVDAVCN 223 (364)
T ss_dssp HHHHHTTCSEEEEEECTTS-------HHHHHHCTT-TCCCC-S--------TTSSS-H----HH--HTHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcCccch-------HHHhccCCc-ccccC-C--------cCCcc-h----hc--ChhhHHHHHHHHHH
Confidence 8889999999999998743 112221111 00000 0 00011 1 00 12222 237888
Q ss_pred hcC-CCEEEEecCC------------HHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 220 ITK-LPILVKGVLT------------AED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 220 ~~~-~Pv~vK~v~~------------~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
.++ .||.+|+... .++ ++.+.++|+|+|.+++.+-.+.. ...++.+.++++.+ ++|||+
T Consensus 224 ~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~ 299 (364)
T 1vyr_A 224 EWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIG 299 (364)
T ss_dssp HSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEE
T ss_pred hcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEE
Confidence 874 3999999742 223 78899999999999753211111 12456778888877 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
+||| +++++.++|+.| ||+|++||+++.
T Consensus 300 ~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l~ 328 (364)
T 1vyr_A 300 AGAY-TAEKAEDLIGKGLIDAVAFGRDYIA 328 (364)
T ss_dssp ESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred ECCc-CHHHHHHHHHCCCccEEEECHHHHh
Confidence 9999 999999999998 999999999985
No 51
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.45 E-value=1e-11 Score=120.52 Aligned_cols=225 Identities=18% Similarity=0.163 Sum_probs=137.4
Q ss_pred cceeEcCeeeccceEeCcccchhcc----CC-hhhHHHHHHHHHcCCceeecCCCCC--------------CHH------
Q 017718 61 MNTTVLGFKISMPIMIAPTAMQKMA----HP-EGEYATARAASAAGTIMTLSSWSTS--------------SVE------ 115 (367)
Q Consensus 61 ~st~i~g~~l~~Pi~iAPm~~~~l~----~~-~~e~~~a~aa~~~G~~~~vs~~~~~--------------~~e------ 115 (367)
...+|.+.++++-|++|||+...-. .| +-....-+.-++-|+.+++++.... +.+
T Consensus 7 ~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~ 86 (340)
T 3gr7_A 7 SPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLR 86 (340)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHH
T ss_pred CCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHH
Confidence 4578899999999999999743211 12 1122333333345666665432110 111
Q ss_pred HHHh---hCCCceEEEEeecC----------------------C------------HHHHHHHHHHHHHcCCcEEEEecC
Q 017718 116 EVAS---TGPGIRFFQLYVYK----------------------D------------RNVVAQLVRRAERAGFKAIALTVD 158 (367)
Q Consensus 116 ~i~~---~~~~~~~~QLy~~~----------------------d------------~~~~~~~l~ra~~~G~~ai~itvd 158 (367)
++.+ ......++||.-.. . .+...+.+++|+++||++|.||..
T Consensus 87 ~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a 166 (340)
T 3gr7_A 87 ELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAA 166 (340)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 1222 22356788985311 0 122345567788899999999998
Q ss_pred CCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhcCCCEEEEecCC---
Q 017718 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTITKLPILVKGVLT--- 232 (367)
Q Consensus 159 ~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~~~Pv~vK~v~~--- 232 (367)
|-. +-+.|--|. .+.+. + +-.++ +. . ...+. .+.+|+.++.||.+|+...
T Consensus 167 ~Gy-------Ll~qFlsp~-~N~R~-D--------~yGGs-le---n---R~r~~~eiv~avr~~v~~pv~vRls~~~~~ 222 (340)
T 3gr7_A 167 HGY-------LINEFLSPL-SNRRQ-D--------EYGGS-PE---N---RYRFLGEVIDAVREVWDGPLFVRISASDYH 222 (340)
T ss_dssp TTC-------HHHHHHCTT-TCCCC-S--------TTSSS-HH---H---HHHHHHHHHHHHHHHCCSCEEEEEESCCCS
T ss_pred cch-------HHHHcCCCc-cCcCC-C--------cccCC-HH---H---HHHHHHHHHHHHHHhcCCceEEEecccccc
Confidence 632 122221110 00000 0 00011 10 0 11222 2388888899999999842
Q ss_pred ---------HHHHHHHHHcCCcEEEEcCCCCCC--CCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-
Q 017718 233 ---------AEDARIAVQAGAAGIIVSNHGARQ--LDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG- 299 (367)
Q Consensus 233 ---------~~~a~~~~~~G~d~i~vs~~gg~~--~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG- 299 (367)
.+.++.+.++|+|+|.+++.+-.. ...++ ..++.+.++++.+ ++|||++|||++++++.++|..|
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCC
Confidence 345889999999999997522111 11122 2567788888887 79999999999999999999999
Q ss_pred CCEEEechHHHH
Q 017718 300 ASGIFIGRPVVY 311 (367)
Q Consensus 300 Ad~V~ig~~~l~ 311 (367)
||+|++||+++.
T Consensus 301 aD~V~iGR~~la 312 (340)
T 3gr7_A 301 ADLVFLGRELLR 312 (340)
T ss_dssp CSEEEECHHHHH
T ss_pred eeEEEecHHHHh
Confidence 999999999985
No 52
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.39 E-value=4e-11 Score=118.81 Aligned_cols=149 Identities=15% Similarity=0.058 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc--
Q 017718 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS-- 213 (367)
Q Consensus 136 ~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-- 213 (367)
+...+.+++|+++||++|.||..|-. +-+.|--|. .+.+. + +-.++ + .. ...+.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGY-------Ll~QFLsp~-~N~Rt-D--------~yGGs-l----en--R~rf~~E 226 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGY-------LIDQFLKDG-INDRT-D--------EYGGS-L----AN--RCKFITQ 226 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTS-------HHHHHHCTT-TCCCC-S--------TTSSS-H----HH--HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCccch-------HHHhccCCc-cCccC-C--------ccCcC-h----hh--hhHHHHH
Confidence 45567778899999999999998733 222221111 00000 0 00011 1 00 11222
Q ss_pred -HHHHHhhcC-CCEEEEecCC---------------HHHHHHHHHcC------CcEEEEcCCCCCCCCCcc--------c
Q 017718 214 -WKWLQTITK-LPILVKGVLT---------------AEDARIAVQAG------AAGIIVSNHGARQLDYVP--------A 262 (367)
Q Consensus 214 -~~~l~~~~~-~Pv~vK~v~~---------------~~~a~~~~~~G------~d~i~vs~~gg~~~~~~~--------~ 262 (367)
.+.+|+.++ .||.+|+... .+.++.+.++| +|+|.+++....+....+ .
T Consensus 227 iv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~ 306 (402)
T 2hsa_B 227 VVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEE 306 (402)
T ss_dssp HHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHH
T ss_pred HHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcc
Confidence 237888874 5999998632 23478889999 999999753211111111 2
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 263 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 263 ~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
.++.+.++++.+ ++|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 307 ~~~~~~~vk~~~--~iPvi~~G~i-~~~~a~~~l~~g~aD~V~igR~~l~ 353 (402)
T 2hsa_B 307 EARLMRTLRNAY--QGTFICSGGY-TRELGIEAVAQGDADLVSYGRLFIS 353 (402)
T ss_dssp HHHHHHHHHHHC--SSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred hHHHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHCCCCceeeecHHHHh
Confidence 456677788777 7999999999 999999999988 999999999975
No 53
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.38 E-value=2.2e-12 Score=148.57 Aligned_cols=206 Identities=17% Similarity=0.217 Sum_probs=139.3
Q ss_pred eeccccC-CCCCCcccee---EcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-----
Q 017718 48 FRPRILI-DVSKIDMNTT---VLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA----- 118 (367)
Q Consensus 48 l~pr~l~-~~~~vd~st~---i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~----- 118 (367)
|.||..+ .-.+++++|. ++| ..||+.|||++.. .+..++.++.++|...+++.....+.|++.
T Consensus 558 f~prlv~~~~~~~~l~t~~t~~lg---~~PIi~a~M~~~v-----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~ 629 (2060)
T 2uva_G 558 HGPRLVKTSVGQTFVDTKMSRLLG---VPPVMVAGMTPTT-----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK 629 (2060)
T ss_dssp HCCEEEECTTCCEEEECHHHHHHT---SCSEEECCCTTTT-----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH
T ss_pred cCCcceecCCCceecchhhhhccc---cceEEecCCCCcc-----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH
Confidence 4566654 2234455554 355 6999999998422 256899999999999888333334444432
Q ss_pred --hhC--CCceEEEEeecCCH--HHHHHHHHHHHHcCCcE--EEEecCCCCCCchhHHhhhhcCCCCccccccccccccC
Q 017718 119 --STG--PGIRFFQLYVYKDR--NVVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLG 190 (367)
Q Consensus 119 --~~~--~~~~~~QLy~~~d~--~~~~~~l~ra~~~G~~a--i~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~ 190 (367)
+.. ..++.+.+...... ....++++.+.+.|+.. +.++.+.|.
T Consensus 630 vk~~~~~~~p~gvN~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~----------------------------- 680 (2060)
T 2uva_G 630 IEKAIPPGRGITVNLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPS----------------------------- 680 (2060)
T ss_dssp HGGGSCTTCCEEEEEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCC-----------------------------
T ss_pred HHhhcccCCCeEecccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCC-----------------------------
Confidence 223 24566666532222 23457888888899887 554333221
Q ss_pred ccccccchhhHHHhhhccCccc-cH-HHHHhhcCCCEEEEecCCHHHHHHH----HHcCCcEEE---EcC--CCCCC--C
Q 017718 191 KMDEANDSGLAAYVAGQIDRSL-SW-KWLQTITKLPILVKGVLTAEDARIA----VQAGAAGII---VSN--HGARQ--L 257 (367)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~d~~~-~~-~~l~~~~~~Pv~vK~v~~~~~a~~~----~~~G~d~i~---vs~--~gg~~--~ 257 (367)
. .+ +.+++ .+++++ +.+.+..+|+.+ .++|+|+|+ +.| .||+. .
T Consensus 681 ---------------------~e~~~~~l~~-~gi~~i-~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~ 737 (2060)
T 2uva_G 681 ---------------------IEVANEYIQT-LGIRHI-SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFE 737 (2060)
T ss_dssp ---------------------HHHHHHHHHH-SCCSEE-EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSC
T ss_pred ---------------------HHHHHHHHHH-cCCeEE-EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcc
Confidence 0 12 14443 488886 667777776666 999999999 654 23331 2
Q ss_pred CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH-----------HcCCCEEEechHHHHHhhc
Q 017718 258 DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 258 ~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal-----------~lGAd~V~ig~~~l~~l~~ 315 (367)
+...+.+..+++|++.+ ++|||++|||.++.|++++| ++|||+|++||.|+.+..+
T Consensus 738 d~~~~~l~lv~~i~~~~--~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea 804 (2060)
T 2uva_G 738 DFHQPILLMYSRIRKCS--NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEA 804 (2060)
T ss_dssp CSHHHHHHHHHHHHTST--TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTS
T ss_pred cccchHHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCC
Confidence 33466788899998876 79999999999999999999 9999999999999875444
No 54
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.36 E-value=8.1e-11 Score=114.54 Aligned_cols=94 Identities=20% Similarity=0.250 Sum_probs=75.2
Q ss_pred HHHHhhc--CCCEEEEecC--------CHHH----HHHHHHcCCcEEEEcCCCCCC----CCCcc-chHHHHHHHHHHhc
Q 017718 215 KWLQTIT--KLPILVKGVL--------TAED----ARIAVQAGAAGIIVSNHGARQ----LDYVP-ATIMALEEVVKATQ 275 (367)
Q Consensus 215 ~~l~~~~--~~Pv~vK~v~--------~~~~----a~~~~~~G~d~i~vs~~gg~~----~~~~~-~~~~~l~~i~~~~~ 275 (367)
+.+|+.+ +.||.+|+.. +.++ ++.+.++|+|+|.+++ |+.. ...++ ..++.+.++++.+
T Consensus 210 ~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~-g~~~~~~~~~~~~~~~~~~~~~ir~~~- 287 (349)
T 3hgj_A 210 QAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS-GGVVLRVRIPLAPGFQVPFADAVRKRV- 287 (349)
T ss_dssp HHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC-CCSCSSSCCCCCTTTTHHHHHHHHHHH-
T ss_pred HHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec-CCcCcccccCCCccccHHHHHHHHHHc-
Confidence 3888888 6899999984 3444 7888999999999985 2221 11122 3567788888877
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 276 GRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 276 ~~~~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
++|||++|||++++++.++|..| ||+|++||+++.
T Consensus 288 -~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~la 323 (349)
T 3hgj_A 288 -GLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR 323 (349)
T ss_dssp -CCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHH
T ss_pred -CceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHh
Confidence 79999999999999999999999 999999999985
No 55
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.35 E-value=3.2e-11 Score=118.47 Aligned_cols=220 Identities=15% Similarity=0.101 Sum_probs=132.7
Q ss_pred ceeEcCeeeccceEeCcccchhc--cCChhhHH---HHHHHHHcCCceeecCCCCC--------------CHHH------
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKM--AHPEGEYA---TARAASAAGTIMTLSSWSTS--------------SVEE------ 116 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l--~~~~~e~~---~a~aa~~~G~~~~vs~~~~~--------------~~e~------ 116 (367)
..+|.+.++++.|++|||+...- ..| .+.. +++.|+ |+.++++++... +.+.
T Consensus 19 P~~ig~~~l~NRiv~aPm~~~~a~~g~p-t~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 95 (376)
T 1icp_A 19 PCKMGKFELCHRVVLAPLTRQRSYGYIP-QPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKP 95 (376)
T ss_dssp CEEETTEEESCSEEECCCCCCCCGGGSC-CHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHH
T ss_pred CeeECCEEECCccEECCcCcCcCCCCCC-CHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHHHHH
Confidence 47889999999999999975431 122 1222 233332 667777654221 2222
Q ss_pred HHh---hCCCceEEEEeec-------------------------------------CCH------------HHHHHHHHH
Q 017718 117 VAS---TGPGIRFFQLYVY-------------------------------------KDR------------NVVAQLVRR 144 (367)
Q Consensus 117 i~~---~~~~~~~~QLy~~-------------------------------------~d~------------~~~~~~l~r 144 (367)
+.+ ....+.++||+-. ..+ +...+.+++
T Consensus 96 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~ 175 (376)
T 1icp_A 96 IVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARN 175 (376)
T ss_dssp HHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 221 1235788999741 012 355667788
Q ss_pred HHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc--c-HHHHHhhc
Q 017718 145 AERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL--S-WKWLQTIT 221 (367)
Q Consensus 145 a~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~-~~~l~~~~ 221 (367)
|+++||++|-||..|-. +-+.|--|. .+.+. + +-.++ +. . ...+ . .+.+|+.+
T Consensus 176 a~~aGfDgVEih~a~Gy-------Ll~qFlsp~-~N~R~-D--------~yGGs-le----n--R~r~~~eiv~aVr~av 231 (376)
T 1icp_A 176 AIEAGFDGVEIHGAHGY-------LIDQFMKDQ-VNDRS-D--------KYGGS-LE----N--RCRFALEIVEAVANEI 231 (376)
T ss_dssp HHHTTCSEEEEEECTTS-------HHHHHHCTT-TCCCC-S--------TTSSS-HH----H--HHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEcCccch-------hhhhccCCc-ccCCC-C--------ccCcc-HH----H--hHHHHHHHHHHHHHHh
Confidence 99999999999998743 222221111 00000 0 00011 10 0 1122 2 23788887
Q ss_pred C-CCEEEEecCC---------------HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 222 K-LPILVKGVLT---------------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 222 ~-~Pv~vK~v~~---------------~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
+ .||.+|.... .+.++.+.++|+|+|.+++....+...+...++.+.++++.+ ++|||++||
T Consensus 232 g~~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~ 309 (376)
T 1icp_A 232 GSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGG 309 (376)
T ss_dssp CGGGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESS
T ss_pred cCCceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCC
Confidence 5 3999999731 244788899999999997522111101111234456777777 789999999
Q ss_pred CCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 286 VRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 286 I~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
| +++++.++|+.| ||+|++||+++.
T Consensus 310 i-~~~~a~~~l~~g~aD~V~~gR~~l~ 335 (376)
T 1icp_A 310 Y-DREDGNRALIEDRADLVAYGRLFIS 335 (376)
T ss_dssp C-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred C-CHHHHHHHHHCCCCcEEeecHHHHh
Confidence 9 899999999987 999999999985
No 56
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.29 E-value=7.5e-11 Score=117.35 Aligned_cols=239 Identities=17% Similarity=0.176 Sum_probs=135.6
Q ss_pred eeeccccC--CCCCCccceeE-cCeeeccceEeCcccchhccCChh---hH--HHHHHHHHcCCceeecCCCC-------
Q 017718 47 LFRPRILI--DVSKIDMNTTV-LGFKISMPIMIAPTAMQKMAHPEG---EY--ATARAASAAGTIMTLSSWST------- 111 (367)
Q Consensus 47 ~l~pr~l~--~~~~vd~st~i-~g~~l~~Pi~iAPm~~~~l~~~~~---e~--~~a~aa~~~G~~~~vs~~~~------- 111 (367)
.|+||... ..+..=...+| .+.++++-|++|||+-.. ..+++ +. ..-+.-++ |+.+++++...
T Consensus 13 ~~~~~~~~M~~~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~-a~~dg~~t~~~~~yy~~rA~-G~GLiIte~~~V~~~g~~ 90 (419)
T 3l5a_A 13 GLVPRGSHMYRYKPLLQSIHLPNGIKISNRFVLSPMTVNA-STKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKL 90 (419)
T ss_dssp --------CCTTGGGGSCEECTTSCEESSSEEECCCCCCC-SCTTCCCCHHHHHHHHHTTT-SCSEEEEEEEESSGGGCC
T ss_pred CcccccccccchhhcCCCEEeCCCCEECCCeEeCCCCCCc-cCCCCCCCHHHHHHHHHHhc-CCcEEEecceEeCccccc
Confidence 46676543 34445567888 899999999999997432 22222 22 22222123 67776653211
Q ss_pred -------CCHH------HHHh---hCCCceEEEEeecCC--------------------------------H-------H
Q 017718 112 -------SSVE------EVAS---TGPGIRFFQLYVYKD--------------------------------R-------N 136 (367)
Q Consensus 112 -------~~~e------~i~~---~~~~~~~~QLy~~~d--------------------------------~-------~ 136 (367)
.+.+ ++.+ ......++||+-... . +
T Consensus 91 ~~~~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~ 170 (419)
T 3l5a_A 91 FEYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQ 170 (419)
T ss_dssp STTCEECSSGGGHHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHH
T ss_pred CCCccccccHHHHHHHHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHH
Confidence 0111 1222 122567788863110 0 1
Q ss_pred HHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---
Q 017718 137 VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS--- 213 (367)
Q Consensus 137 ~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--- 213 (367)
...+.+++|+++||++|.|+..+-. +-+.|--|. .+.+. + +-.++.+. . ...|-
T Consensus 171 ~F~~AA~rA~~AGfDgVEIH~ahGY-------Ll~QFlSp~-~N~Rt-D--------~yGGs~le----n--R~Rf~~ev 227 (419)
T 3l5a_A 171 QYRDATLRAIKAGFDGVEISIAQRL-------LIQTFFSTF-SNRRT-D--------HYGADSLK----N--RARLCLEV 227 (419)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTS-------HHHHHHCTT-TCCCC-S--------TTSTTCHH----H--HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCccch-------HHHHccCCc-ccccc-c--------CCCCchhh----h--hhHHHHHH
Confidence 2345567888999999999998733 222231111 00000 0 00111100 0 11121
Q ss_pred HHHHHhhc------CCCEEEEecC----------CHH----HHHHHHH-cCCcEEEEcCCCC----C-CCCCcc-chHHH
Q 017718 214 WKWLQTIT------KLPILVKGVL----------TAE----DARIAVQ-AGAAGIIVSNHGA----R-QLDYVP-ATIMA 266 (367)
Q Consensus 214 ~~~l~~~~------~~Pv~vK~v~----------~~~----~a~~~~~-~G~d~i~vs~~gg----~-~~~~~~-~~~~~ 266 (367)
.+.+|+.+ +.||.+|+.. +.+ .++.+.+ +|+|+|.|++.+. . +...++ ...+.
T Consensus 228 v~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~ 307 (419)
T 3l5a_A 228 MRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPV 307 (419)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBH
T ss_pred HHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHH
Confidence 23677766 5799999864 333 3778888 9999999976332 1 111122 12345
Q ss_pred HHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 267 LEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 267 l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+..+++.+++++|||++|||++++++.++|+. ||+|++||+++.
T Consensus 308 a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~~-aDlVaiGR~~Ia 351 (419)
T 3l5a_A 308 NQIVYEHLAGRIPLIASGGINSPESALDALQH-ADMVGMSSPFVT 351 (419)
T ss_dssp HHHHHHHHTTSSCEEECSSCCSHHHHHHHGGG-CSEEEESTHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCHHHHHHHHHh-CCcHHHHHHHHH
Confidence 66777777667999999999999999999999 999999999974
No 57
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.29 E-value=2.2e-10 Score=111.12 Aligned_cols=93 Identities=17% Similarity=0.105 Sum_probs=73.1
Q ss_pred HHHHhhc--CCCEEEEecCC--------HH----HHHHHHHcCCcEEEEcCCCCCCC---CCcc-chHHHHHHHHHHhcC
Q 017718 215 KWLQTIT--KLPILVKGVLT--------AE----DARIAVQAGAAGIIVSNHGARQL---DYVP-ATIMALEEVVKATQG 276 (367)
Q Consensus 215 ~~l~~~~--~~Pv~vK~v~~--------~~----~a~~~~~~G~d~i~vs~~gg~~~---~~~~-~~~~~l~~i~~~~~~ 276 (367)
+.+|+.+ +.||.+|+..+ .+ .++.+.++ +|+|.++. |+... ...+ ..++.+.++++.+
T Consensus 201 ~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~-g~~~~~~~~~~~~~~~~~~~~ir~~~-- 276 (343)
T 3kru_A 201 DEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSS-GGLLNVDINLYPGYQVKYAETIKKRC-- 276 (343)
T ss_dssp HHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEEC-CCSSCCCCCCCTTTTHHHHHHHHHHH--
T ss_pred HHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccC-CceEeeeecccCceeehHHHHHHHhc--
Confidence 3888888 68999999842 33 37788888 99999973 33211 1112 2567778888887
Q ss_pred CCcEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 277 RIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 277 ~~~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
++|||++|||++++++.++|..| ||+|++||+++.
T Consensus 277 ~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~la 312 (343)
T 3kru_A 277 NIKTSAVGLITTQELAEEILSNERADLVALGRELLR 312 (343)
T ss_dssp TCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhc
Confidence 79999999999999999999998 999999999985
No 58
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.27 E-value=1.2e-10 Score=122.54 Aligned_cols=224 Identities=13% Similarity=0.090 Sum_probs=136.4
Q ss_pred ceeEcCeeeccceEeCcccchhccCChh-h--HHHHHHHHHcCCceeecCCCCC--------------CHHH------HH
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKMAHPEG-E--YATARAASAAGTIMTLSSWSTS--------------SVEE------VA 118 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l~~~~~-e--~~~a~aa~~~G~~~~vs~~~~~--------------~~e~------i~ 118 (367)
..+|.+.+++++|++|||+...-..+.. + ...-+.-++-|..++++++.+. +.+. +.
T Consensus 8 p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 8 PLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp CEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred CeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 4778899999999999997532111211 1 2222223356788777654211 1121 22
Q ss_pred h---hCCCceEEEEeecC---------------------CH------------HHHHHHHHHHHHcCCcEEEEecCCCCC
Q 017718 119 S---TGPGIRFFQLYVYK---------------------DR------------NVVAQLVRRAERAGFKAIALTVDTPRL 162 (367)
Q Consensus 119 ~---~~~~~~~~QLy~~~---------------------d~------------~~~~~~l~ra~~~G~~ai~itvd~p~~ 162 (367)
+ ....+.++||+-.. .+ +...+.+++|+++||+++-||..|..
T Consensus 88 ~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gy- 166 (671)
T 1ps9_A 88 EAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGY- 166 (671)
T ss_dssp HHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTS-
T ss_pred HHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch-
Confidence 1 22357899997421 12 34556778889999999999998744
Q ss_pred CchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhc--CCCEEEEecC------
Q 017718 163 GRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTIT--KLPILVKGVL------ 231 (367)
Q Consensus 163 g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~--~~Pv~vK~v~------ 231 (367)
+-+.|--|. .+.+. + +-.++ +. . ...+. .+.+|+.+ +.||.+|+..
T Consensus 167 ------l~~qFlsp~-~n~r~-d--------~yGgs-~~----~--r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~ 223 (671)
T 1ps9_A 167 ------LINEFLTLR-TNQRS-D--------QWGGD-YR----N--RMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVED 223 (671)
T ss_dssp ------HHHHHHCTT-TCCCC-S--------TTSSS-HH----H--HHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTT
T ss_pred ------HHHHhCCCc-cCCCc-C--------cCCCc-HH----H--HHHHHHHHHHHHHHHcCCCceEEEEECccccCCC
Confidence 222231111 00000 0 00011 10 0 11222 23788888 6899999872
Q ss_pred --CH----HHHHHHHHcCCcEEEEcCCCCCC------CCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 232 --TA----EDARIAVQAGAAGIIVSNHGARQ------LDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 232 --~~----~~a~~~~~~G~d~i~vs~~gg~~------~~~~~~-~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
+. +.++.+.++|+|+|.+++..... ....+. .++.+.++++.+ ++|||++|||.+++++.++++.
T Consensus 224 g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~ 301 (671)
T 1ps9_A 224 GGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR 301 (671)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHc
Confidence 23 33788899999999997521100 011111 245666666655 7999999999999999999999
Q ss_pred C-CCEEEechHHHH
Q 017718 299 G-ASGIFIGRPVVY 311 (367)
Q Consensus 299 G-Ad~V~ig~~~l~ 311 (367)
| ||+|++||+++.
T Consensus 302 g~aD~V~~gR~~l~ 315 (671)
T 1ps9_A 302 GDADMVSMARPFLA 315 (671)
T ss_dssp TSCSEEEESTHHHH
T ss_pred CCCCEEEeCHHHHh
Confidence 8 999999999985
No 59
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.22 E-value=6.8e-10 Score=108.55 Aligned_cols=95 Identities=19% Similarity=0.125 Sum_probs=74.1
Q ss_pred HHHHhhc--CCCEEEEecCC---------HHH----HHHHHHcCCcEEEEcCCCCC---CCCCcc-chHHHHHHHHHHhc
Q 017718 215 KWLQTIT--KLPILVKGVLT---------AED----ARIAVQAGAAGIIVSNHGAR---QLDYVP-ATIMALEEVVKATQ 275 (367)
Q Consensus 215 ~~l~~~~--~~Pv~vK~v~~---------~~~----a~~~~~~G~d~i~vs~~gg~---~~~~~~-~~~~~l~~i~~~~~ 275 (367)
+.+|+.+ +.||.+|+..+ .++ ++.+.++|+|+|.+++.+-. ....++ ..++.+.++++.+
T Consensus 216 ~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~- 294 (363)
T 3l5l_A 216 AAVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA- 294 (363)
T ss_dssp HHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-
T ss_pred HHHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-
Confidence 3788887 58999999732 223 78899999999999862211 111222 2467778888877
Q ss_pred CCCcEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 276 GRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 276 ~~~~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
++|||++|||++++++.++|..| ||+|++||+++.
T Consensus 295 -~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~la 330 (363)
T 3l5l_A 295 -KLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHLA 330 (363)
T ss_dssp -TCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred -CCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHHh
Confidence 79999999999999999999999 999999999985
No 60
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.21 E-value=3.1e-10 Score=120.50 Aligned_cols=223 Identities=12% Similarity=0.081 Sum_probs=133.1
Q ss_pred ceeEcCeeeccceEeCcccchhc-cCChhhHHHHHHHHHcCCceeecCCCCC---------------CHHH------HHh
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKM-AHPEGEYATARAASAAGTIMTLSSWSTS---------------SVEE------VAS 119 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l-~~~~~e~~~a~aa~~~G~~~~vs~~~~~---------------~~e~------i~~ 119 (367)
.++|.+.+++++|++|||+...- ..|......-+.-++-|+.++++++.+. +.+. +.+
T Consensus 12 p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (729)
T 1o94_A 12 PIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTD 91 (729)
T ss_dssp CEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHH
T ss_pred CeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHH
Confidence 47889999999999999975311 1121112222222356777776543110 1221 211
Q ss_pred ---hCCCceEEEEeecC-----------------------C---------------HHHHHHHHHHHHHcCCcEEEEecC
Q 017718 120 ---TGPGIRFFQLYVYK-----------------------D---------------RNVVAQLVRRAERAGFKAIALTVD 158 (367)
Q Consensus 120 ---~~~~~~~~QLy~~~-----------------------d---------------~~~~~~~l~ra~~~G~~ai~itvd 158 (367)
....+.++||+-.. + .+...+.+++|+++||++|-||..
T Consensus 92 ~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a 171 (729)
T 1o94_A 92 EVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGA 171 (729)
T ss_dssp HHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred HHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 12357889997410 0 144566778889999999999998
Q ss_pred CCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhc--CCCEEEEecC--
Q 017718 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTIT--KLPILVKGVL-- 231 (367)
Q Consensus 159 ~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~--~~Pv~vK~v~-- 231 (367)
|.+ +-+.|--|. .+.+. + +-.++ + .. ...+. .+.+|+.+ +.||.+|++.
T Consensus 172 ~gy-------Ll~qFlsp~-~N~R~-D--------~yGGs-~----en--R~r~~~eiv~avr~~vg~~~pv~vrls~~~ 227 (729)
T 1o94_A 172 HSY-------LPLQFLNPY-YNKRT-D--------KYGGS-L----EN--RARFWLETLEKVKHAVGSDCAIATRFGVDT 227 (729)
T ss_dssp TTC-------HHHHHHCTT-TCCCC-S--------TTSSS-H----HH--HTHHHHHHHHHHHHHHTTTSEEEEEEEEEC
T ss_pred cch-------HHHHhcCCc-cCCCc-C--------cCCCC-H----HH--HhHHHHHHHHHHHHHhCCCceEEEEEcccc
Confidence 843 223331111 00000 0 00111 1 00 12232 23888888 7899999962
Q ss_pred -------C-H----HHHHHHHHcCCcEEEEcCCCC-----CC---CCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 232 -------T-A----EDARIAVQAGAAGIIVSNHGA-----RQ---LDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 232 -------~-~----~~a~~~~~~G~d~i~vs~~gg-----~~---~~~~~~-~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+ . +.++.+.+ |+|.+.+++.+. .. ....+. .++...++++.+ ++|||++|||.+++
T Consensus 228 ~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~ 304 (729)
T 1o94_A 228 VYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPE 304 (729)
T ss_dssp SSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHH
T ss_pred CcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHH
Confidence 1 2 23555554 899999965220 00 011111 356677777766 79999999999999
Q ss_pred HHHHHHHcC-CCEEEechHHHH
Q 017718 291 DVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 291 dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
++.++|+.| ||+|++||+++.
T Consensus 305 ~a~~~l~~g~aD~V~~gR~~l~ 326 (729)
T 1o94_A 305 KMIEIVTKGYADIIGCARPSIA 326 (729)
T ss_dssp HHHHHHHTTSCSBEEESHHHHH
T ss_pred HHHHHHHCCCCCEEEeCchhhc
Confidence 999999998 999999999875
No 61
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.19 E-value=4.6e-10 Score=118.39 Aligned_cols=224 Identities=14% Similarity=0.037 Sum_probs=135.1
Q ss_pred cceeEcCeeeccceEeCcccchhccCChhh--HHHHHHHHHcCCceeecCCCCC---------------CHH------HH
Q 017718 61 MNTTVLGFKISMPIMIAPTAMQKMAHPEGE--YATARAASAAGTIMTLSSWSTS---------------SVE------EV 117 (367)
Q Consensus 61 ~st~i~g~~l~~Pi~iAPm~~~~l~~~~~e--~~~a~aa~~~G~~~~vs~~~~~---------------~~e------~i 117 (367)
...+|.+.+++++|++|||+... ..+..+ ..+.+..++-|+.++++++... +.+ ++
T Consensus 16 ~p~~ig~~~l~NRiv~apm~~~~-~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (690)
T 3k30_A 16 EPVQIGPFTTKNRFYQVPHCNGM-GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRI 94 (690)
T ss_dssp CCCEETTEECSSSEEECCCCCSC-SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHH
T ss_pred CCeeECCEEECCCeEeCCCcCCC-CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHH
Confidence 34788999999999999996432 222212 2344556677887777654211 111 12
Q ss_pred Hh---hCCCceEEEEeecC-------------------------C---------------HHHHHHHHHHHHHcCCcEEE
Q 017718 118 AS---TGPGIRFFQLYVYK-------------------------D---------------RNVVAQLVRRAERAGFKAIA 154 (367)
Q Consensus 118 ~~---~~~~~~~~QLy~~~-------------------------d---------------~~~~~~~l~ra~~~G~~ai~ 154 (367)
.+ ....+.++||+-.. + .+...+.+++|+++||++|.
T Consensus 95 ~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVe 174 (690)
T 3k30_A 95 ADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVY 174 (690)
T ss_dssp HHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 21 22357889998210 0 14456677889999999999
Q ss_pred EecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc---HHHHHhhc--CCCEEEEe
Q 017718 155 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS---WKWLQTIT--KLPILVKG 229 (367)
Q Consensus 155 itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~l~~~~--~~Pv~vK~ 229 (367)
||..+++. +-+.|--|. .+.+. + +-.++ +. . ...|. .+.+|+.+ +.||.+|+
T Consensus 175 ih~a~gy~------L~~qFlsp~-~N~R~-D--------~yGGs-~e---n---R~r~~~ei~~avr~~~g~~~~v~~r~ 231 (690)
T 3k30_A 175 VYGAHGYS------GVHHFLSKR-YNQRT-D--------EYGGS-LE---N---RMRLLRELLEDTLDECAGRAAVACRI 231 (690)
T ss_dssp EEECTTCS------HHHHHHCTT-TCCCC-S--------TTSSS-HH---H---HTHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred Ecccccch------HHHHhCCCc-cCCCc-c--------ccCCC-HH---H---HHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 99987651 222331121 01010 0 00111 10 0 11222 23788888 57999998
Q ss_pred cC--------CHHH----HHHHHHcCCcEEEEcCCCC---C--CCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 230 VL--------TAED----ARIAVQAGAAGIIVSNHGA---R--QLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 230 v~--------~~~~----a~~~~~~G~d~i~vs~~gg---~--~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
.. +.++ ++.+.+ |+|.|.++..+- . ...... ..++...++++.+ ++|||++|||+++++
T Consensus 232 s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~ 308 (690)
T 3k30_A 232 TVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDA 308 (690)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHH
T ss_pred CccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHH
Confidence 63 2333 556655 899999964210 0 011111 1245566666655 799999999999999
Q ss_pred HHHHHHcC-CCEEEechHHHH
Q 017718 292 VFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 292 v~kal~lG-Ad~V~ig~~~l~ 311 (367)
+.++|..| ||+|++||+++.
T Consensus 309 a~~~l~~g~~d~v~~gR~~~~ 329 (690)
T 3k30_A 309 MVRQIKAGILDLIGAARPSIA 329 (690)
T ss_dssp HHHHHHTTSCSEEEESHHHHH
T ss_pred HHHHHHCCCcceEEEcHHhHh
Confidence 99999988 999999999874
No 62
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.16 E-value=1.4e-09 Score=98.70 Aligned_cols=92 Identities=20% Similarity=0.286 Sum_probs=74.5
Q ss_pred HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC--CCC--ccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 216 WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ--LDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~--~~~--~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
++++.+ +.++++ .+.+.++++.+.++|+|+|.++++|.+. .+. ..+.++.++++++.+ ++||+++|||++++
T Consensus 112 ~~~~~~~~~~v~~-~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~ 188 (223)
T 1y0e_A 112 YIRTHAPNVEIMA-DIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPD 188 (223)
T ss_dssp HHHHHCTTSEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHH
T ss_pred HHHHhCCCceEEe-cCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHH
Confidence 666665 555554 6678999999999999999887766542 122 345678888888876 79999999999999
Q ss_pred HHHHHHHcCCCEEEechHHH
Q 017718 291 DVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l 310 (367)
|+.+++++|||+|++||+++
T Consensus 189 ~~~~~~~~Gad~v~vG~al~ 208 (223)
T 1y0e_A 189 MYKRVMDLGVHCSVVGGAIT 208 (223)
T ss_dssp HHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHcCCCEEEEChHHc
Confidence 99999999999999999864
No 63
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.16 E-value=2e-09 Score=104.98 Aligned_cols=86 Identities=14% Similarity=-0.014 Sum_probs=68.4
Q ss_pred HHHHhhcCC-CEEEEecCC-----------H----HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCC
Q 017718 215 KWLQTITKL-PILVKGVLT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 278 (367)
Q Consensus 215 ~~l~~~~~~-Pv~vK~v~~-----------~----~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~ 278 (367)
+.+|+.++. ||.+|+... . +.++.+.++|+|+|.+++. + .++ +.+.++++.+ ++
T Consensus 219 ~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~--~---~~~---~~~~~ik~~~--~i 288 (361)
T 3gka_A 219 DAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARES--F---GGD---AIGQQLKAAF--GG 288 (361)
T ss_dssp HHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECC--C---STT---CCHHHHHHHH--CS
T ss_pred HHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCC--C---CCH---HHHHHHHHHc--CC
Confidence 378888743 999999742 2 2378889999999999752 2 122 3456777777 78
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 279 PVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
|||++||| +++++.++|..| ||+|++||+++.
T Consensus 289 Pvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~la 321 (361)
T 3gka_A 289 PFIVNENF-TLDSAQAALDAGQADAVAWGKLFIA 321 (361)
T ss_dssp CEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 99999999 999999999998 999999999985
No 64
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.15 E-value=2.5e-09 Score=104.33 Aligned_cols=86 Identities=20% Similarity=0.058 Sum_probs=68.3
Q ss_pred HHHHhhcC-CCEEEEecCC-----------HH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCC
Q 017718 215 KWLQTITK-LPILVKGVLT-----------AE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 278 (367)
Q Consensus 215 ~~l~~~~~-~Pv~vK~v~~-----------~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~ 278 (367)
+.+|+.++ -||.+|+... .+ .++.+.++|+|+|.+++.. .++ +.+.++++.+ ++
T Consensus 211 ~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~i 280 (362)
T 4ab4_A 211 DAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIKEAF--GG 280 (362)
T ss_dssp HHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHHHH--CS
T ss_pred HHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHHHC--CC
Confidence 37888874 3999999742 22 2788899999999997522 122 3456777777 78
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 279 PVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
|||++||| +++++.++|..| ||+|++||+++.
T Consensus 281 Pvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~la 313 (362)
T 4ab4_A 281 PYIVNERF-DKASANAALASGKADAVAFGVPFIA 313 (362)
T ss_dssp CEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred CEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHh
Confidence 99999999 999999999998 999999999985
No 65
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.15 E-value=2.3e-09 Score=98.51 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=71.9
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCC-CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
.+++ .++++++ .+.+.++++.+.++|+|+|.+.++|.+.. ....+.++.++++++. ++|||++|||.+++|+.+
T Consensus 124 ~~~~-~g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~ 198 (232)
T 3igs_A 124 RIHH-HHLLTMA-DCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAE 198 (232)
T ss_dssp HHHH-TTCEEEE-ECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHH
T ss_pred HHHH-CCCEEEE-eCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHH
Confidence 4443 3666655 57889999999999999998766654321 1234578888888763 799999999999999999
Q ss_pred HHHcCCCEEEechHHH
Q 017718 295 ALALGASGIFIGRPVV 310 (367)
Q Consensus 295 al~lGAd~V~ig~~~l 310 (367)
++.+|||+|++|+.++
T Consensus 199 ~~~~GadgV~VGsal~ 214 (232)
T 3igs_A 199 AIRYGAWAVTVGSAIT 214 (232)
T ss_dssp HHHTTCSEEEECHHHH
T ss_pred HHHcCCCEEEEehHhc
Confidence 9999999999999886
No 66
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.14 E-value=1.3e-09 Score=99.89 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=72.3
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCC-CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~-~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
.+++ .++++++ .+.+.++++.+.++|+|+|.+.++|.+.. ....+.++.++++++. ++|||++|||.+++|+.+
T Consensus 124 ~~~~-~g~~v~~-~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~ 198 (229)
T 3q58_A 124 RIRL-HGLLAMA-DCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAAN 198 (229)
T ss_dssp HHHH-TTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHH
T ss_pred HHHH-CCCEEEE-ecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHH
Confidence 4443 3666655 57899999999999999998766654321 1234577888888653 799999999999999999
Q ss_pred HHHcCCCEEEechHHHH
Q 017718 295 ALALGASGIFIGRPVVY 311 (367)
Q Consensus 295 al~lGAd~V~ig~~~l~ 311 (367)
++.+|||+|++|+.++.
T Consensus 199 ~~~~GadgV~VGsai~~ 215 (229)
T 3q58_A 199 AIEHGAWAVTVGSAITR 215 (229)
T ss_dssp HHHTTCSEEEECHHHHC
T ss_pred HHHcCCCEEEEchHhcC
Confidence 99999999999998863
No 67
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.12 E-value=9.1e-09 Score=96.25 Aligned_cols=198 Identities=14% Similarity=0.132 Sum_probs=114.9
Q ss_pred ceeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCcee-ecC-CC---CCCHHHHHhhCC---CceEEEEeecC
Q 017718 62 NTTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSS-WS---TSSVEEVASTGP---GIRFFQLYVYK 133 (367)
Q Consensus 62 st~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~-vs~-~~---~~~~e~i~~~~~---~~~~~QLy~~~ 133 (367)
.++|.|+++++|++++.-+. |+.+ .+.++..+.|+.++ ++- .+ ..+++++.+..+ .+...+.....
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~-----p~~~-~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~~~~~~~pn~~~~~ 76 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKY-----PSFD-IQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDLSKYTLLPNTAGAS 76 (264)
T ss_dssp CEEETTEEESCCEEEECSCS-----SCHH-HHHHHHHHHTCSEEEEETTSSTTC-------CTTCCGGGSEEEEECTTCS
T ss_pred CeEECCEEecCCCEEEecCC-----CCHH-HHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHhcCCeEcCCccccC
Confidence 47799999999999998654 3333 34567777787765 231 11 223444443322 12222322224
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcccc
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLS 213 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 213 (367)
+.+.....++.++++|...+ ++++.... .|.. .+....
T Consensus 77 ~~~~~~~f~~~a~~agg~~~-i~l~i~~d------------~~~~-----------------------------~~e~~~ 114 (264)
T 1xm3_A 77 TAEEAVRIARLAKASGLCDM-IKVEVIGC------------SRSL-----------------------------LPDPVE 114 (264)
T ss_dssp SHHHHHHHHHHHHHTTCCSS-EEECCBCC------------TTTC-----------------------------CBCHHH
T ss_pred CHHHHHHHHHHHHHcCCCCe-EEEeecCC------------Cccc-----------------------------ccchHH
Confidence 45554456777777653322 23332110 0000 000001
Q ss_pred H-HHHHhhc--CCCEEEEecCCHHHHHHHHHcCCcEEEEcCC-CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 214 W-KWLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 214 ~-~~l~~~~--~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+ +.+++.. ++.++.-.+.+.+.++++.+.|+|+|...+. -|+. .+....+.|.++++.. ++||++.|||+++
T Consensus 115 ~~~~a~~~~~~g~~vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt~--~~~~~~~~l~~i~~~~--~iPviv~gGI~t~ 190 (264)
T 1xm3_A 115 TLKASEQLLEEGFIVLPYTSDDVVLARKLEELGVHAIMPGASPIGSG--QGILNPLNLSFIIEQA--KVPVIVDAGIGSP 190 (264)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCHHHHHHHHHHTCSCBEECSSSTTCC--CCCSCHHHHHHHHHHC--SSCBEEESCCCSH
T ss_pred HHHHHHHHHCCCeEEEEEcCCCHHHHHHHHHhCCCEEEECCcccCCC--CCCCCHHHHHHHHhcC--CCCEEEEeCCCCH
Confidence 1 2344332 5555544456788999999999999944221 1211 1233466788887754 8999999999999
Q ss_pred HHHHHHHHcCCCEEEechHHHH
Q 017718 290 TDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+|+.+++++|||+|.+|++++.
T Consensus 191 eda~~~~~~GAdgViVGSAi~~ 212 (264)
T 1xm3_A 191 KDAAYAMELGADGVLLNTAVSG 212 (264)
T ss_dssp HHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEcHHHhC
Confidence 9999999999999999998764
No 68
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.04 E-value=4.2e-09 Score=96.24 Aligned_cols=90 Identities=23% Similarity=0.248 Sum_probs=71.0
Q ss_pred HHHHHhhcCCCEEEEec-----CCH----HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 214 WKWLQTITKLPILVKGV-----LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 214 ~~~l~~~~~~Pv~vK~v-----~~~----~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
++.+++..+ |+++|.+ .+. +.++.+.++|+|+|.+ ++|. ..+..+++.++++++.+++++||+++|
T Consensus 108 i~~v~~a~~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t-stg~---~~gga~~~~i~~v~~~v~~~ipVia~G 182 (225)
T 1mzh_A 108 LKEIFRETP-SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT-STGF---APRGTTLEEVRLIKSSAKGRIKVKASG 182 (225)
T ss_dssp HHHHHHTCT-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC-CCSC---SSSCCCHHHHHHHHHHHTTSSEEEEES
T ss_pred HHHHHHHhc-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE-CCCC---CCCCCCHHHHHHHHHHhCCCCcEEEEC
Confidence 347777777 9999993 343 3378899999999944 4432 223367888888888886689999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEechH
Q 017718 285 GVRRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V~ig~~ 308 (367)
||++++|+.+++.+|||.|++++.
T Consensus 183 GI~t~~da~~~l~aGA~~iG~s~~ 206 (225)
T 1mzh_A 183 GIRDLETAISMIEAGADRIGTSSG 206 (225)
T ss_dssp SCCSHHHHHHHHHTTCSEEEESCH
T ss_pred CCCCHHHHHHHHHhCchHHHHccH
Confidence 999999999999999998887764
No 69
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=98.95 E-value=6.2e-09 Score=119.68 Aligned_cols=192 Identities=14% Similarity=0.146 Sum_probs=125.5
Q ss_pred eeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-------hhC--CCceEEEEeecC
Q 017718 63 TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA-------STG--PGIRFFQLYVYK 133 (367)
Q Consensus 63 t~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~-------~~~--~~~~~~QLy~~~ 133 (367)
|+++|+ .||+.+||+... .+..++.|+.++|....+......+.|++. +.. +.++.+.+....
T Consensus 584 t~llg~---~PIi~~gM~~~~-----~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~~gvN~~~~~ 655 (2051)
T 2uv8_G 584 SKLIGR---PPLLVPGMTPCT-----VSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGSTFGINLIYVN 655 (2051)
T ss_dssp HHHHSS---CSEEECCCHHHH-----TCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCCEEEEEETTC
T ss_pred HHhhCc---cceecCCCcccc-----ccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 457883 699999997432 246899999999988888433334444332 212 245666654322
Q ss_pred CH--HHHHHHHHHHHHcCCcE--EEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccC
Q 017718 134 DR--NVVAQLVRRAERAGFKA--IALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (367)
Q Consensus 134 d~--~~~~~~l~ra~~~G~~a--i~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (367)
.. ....++++.+.+.|+.. +.+..+.|.
T Consensus 656 ~~~~~~~~~~~~~~~~~gv~i~~v~~~ag~p~------------------------------------------------ 687 (2051)
T 2uv8_G 656 PFMLQWGIPLIKELRSKGYPIQFLTIGAGVPS------------------------------------------------ 687 (2051)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEEEESSCCC------------------------------------------------
T ss_pred hhhhhhhHHHHHHHHHcCCCcceEEecCCCCc------------------------------------------------
Confidence 21 11237888888999887 444333221
Q ss_pred ccccH--HHHHhhcCCCEEEEecCCH---HHHHHHHHcCCcEE---EEcC--CCCCC--CCCccchHHHHHHHHHHhcCC
Q 017718 210 RSLSW--KWLQTITKLPILVKGVLTA---EDARIAVQAGAAGI---IVSN--HGARQ--LDYVPATIMALEEVVKATQGR 277 (367)
Q Consensus 210 ~~~~~--~~l~~~~~~Pv~vK~v~~~---~~a~~~~~~G~d~i---~vs~--~gg~~--~~~~~~~~~~l~~i~~~~~~~ 277 (367)
++. +++.+ .+++++.....+. ..+..++++|+|++ ++.| .||+. .+....++..++++++.+ +
T Consensus 688 --~~~~~~~i~~-lG~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~--~ 762 (2051)
T 2uv8_G 688 --LEVASEYIET-LGLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHP--N 762 (2051)
T ss_dssp --HHHHHHHHHH-SCCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCT--T
T ss_pred --hhhHHHHHHH-cCCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcC--C
Confidence 111 13333 3888876544443 45678888999993 3333 24442 123345667788888776 8
Q ss_pred CcEEEecCCCCHHHHHHHH-----------HcCCCEEEechHHHHHhhc
Q 017718 278 IPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 278 ~~via~GGI~~~~dv~kal-----------~lGAd~V~ig~~~l~~l~~ 315 (367)
+|||+.|||.+|.+++.+| +||||+|++||.|+-+-.+
T Consensus 763 ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea 811 (2051)
T 2uv8_G 763 IMLIFGSGFGSADDTYPYLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEV 811 (2051)
T ss_dssp BCCEEESSCCSHHHHTHHHHTCGGGTTTCCCCCCSCEECSGGGTTSTTS
T ss_pred ceEEEeCCCCCHHHHHHHHccccccccCccCCCCceeeechHHHhCccc
Confidence 9999999999999999999 8999999999999865433
No 70
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.93 E-value=3.7e-08 Score=90.75 Aligned_cols=86 Identities=16% Similarity=0.259 Sum_probs=70.4
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCC-CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCC
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 300 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGA 300 (367)
+..++.-.+.++..++++.++|+++|...+. -|+ ..+..+++.|+++++.. ++|||++|||.+++|+.+++.+||
T Consensus 135 Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGs--G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~AmeLGA 210 (265)
T 1wv2_A 135 GFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGS--GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAMELGC 210 (265)
T ss_dssp TCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTC--CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHHHTC
T ss_pred CCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCC--CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHHcCC
Confidence 5666655668899999999999999977332 122 12456788999988865 899999999999999999999999
Q ss_pred CEEEechHHHH
Q 017718 301 SGIFIGRPVVY 311 (367)
Q Consensus 301 d~V~ig~~~l~ 311 (367)
|+|++|+++..
T Consensus 211 dgVlVgSAI~~ 221 (265)
T 1wv2_A 211 EAVLMNTAIAH 221 (265)
T ss_dssp SEEEESHHHHT
T ss_pred CEEEEChHHhC
Confidence 99999998863
No 71
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.75 E-value=1.9e-08 Score=119.58 Aligned_cols=211 Identities=18% Similarity=0.221 Sum_probs=132.7
Q ss_pred eeeccccCCC-CC--Cccc-eeEcCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHH-----
Q 017718 47 LFRPRILIDV-SK--IDMN-TTVLGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEV----- 117 (367)
Q Consensus 47 ~l~pr~l~~~-~~--vd~s-t~i~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i----- 117 (367)
.|.|+..+.- .. .++. ++++| ..||+.+||++.. ....|+.+..++|....++.....+.+.+
T Consensus 402 ~f~P~l~~~~~g~~~~~t~~~~~lg---~~PIi~a~M~~~~-----s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~ 473 (3089)
T 3zen_D 402 SYAPTVVKLPDGSVKLETKFTRLTG---RSPILLAGMTPTT-----VDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIA 473 (3089)
T ss_dssp GGCCEEEECTTCCEEEECHHHHHHS---SCSEEECCCHHHH-----TSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHH
T ss_pred ccCCcccccCCCcccccchhhhhcC---CCCEEeCCCcCCc-----CCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHH
Confidence 3666655421 22 2332 34667 7899999998643 13579999999999888854433344432
Q ss_pred --HhhC--CCceEEEEeecCCHHH------HHHHHHHHHHcC--CcEEEEecCCCCCCchhHHhhhhcCCCCcccccccc
Q 017718 118 --ASTG--PGIRFFQLYVYKDRNV------VAQLVRRAERAG--FKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQ 185 (367)
Q Consensus 118 --~~~~--~~~~~~QLy~~~d~~~------~~~~l~ra~~~G--~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~ 185 (367)
.+.. +.++.+.+. .-++.. .+++++.+.+.| +++++++.+.|-. + .
T Consensus 474 ~~r~~~~~~~p~~vNl~-~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~~---e--e---------------- 531 (3089)
T 3zen_D 474 ELETLLEPGRAIQFNTL-FLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPDL---E--E---------------- 531 (3089)
T ss_dssp HHHHHSCTTCCCEEEEE-CSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCCH---H--H----------------
T ss_pred HHHHhcCCCCceeechh-hcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCch---h--H----------------
Confidence 2222 233434332 123332 146788899999 7778887775520 0 0
Q ss_pred ccccCccccccchhhHHHhhhccCccccHH-HHHhhcCCCEEEEecCCHHHHHHHHHcCCc------EEEEcCC--CCCC
Q 017718 186 GLDLGKMDEANDSGLAAYVAGQIDRSLSWK-WLQTITKLPILVKGVLTAEDARIAVQAGAA------GIIVSNH--GARQ 256 (367)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d------~i~vs~~--gg~~ 256 (367)
.. .|- .+++ .++.++.=.+.+.++++++.+.|+| +|++.|. ||+.
T Consensus 532 --------------~~-----------~~i~~l~~-~Gi~~i~~~~~t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~ 585 (3089)
T 3zen_D 532 --------------AV-----------DIIDELNE-VGISHVVFKPGTVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHH 585 (3089)
T ss_dssp --------------HH-----------HHHTSTTH-HHHCSEEECCCSHHHHHHHHHHHTTSTTSCEEEEECCSSSSEEC
T ss_pred --------------hH-----------HHHHHHHH-cCCEEEEEeCCCHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCC
Confidence 00 010 2222 3455554346788999999999999 8888763 3332
Q ss_pred CCCccchHHHHHHHHHHhc--CCCcEEEecCCCCHHHHHHHH-----------HcCCCEEEechHHHHHhhc
Q 017718 257 LDYVPATIMALEEVVKATQ--GRIPVFLDGGVRRGTDVFKAL-----------ALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 257 ~~~~~~~~~~l~~i~~~~~--~~~~via~GGI~~~~dv~kal-----------~lGAd~V~ig~~~l~~l~~ 315 (367)
+.....+.+.+....++ .++|||+.|||.+++++..+| ++|||+|++||.|+....+
T Consensus 586 --g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lGAdGV~vGTrfl~t~Ea 655 (3089)
T 3zen_D 586 --SWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMPIDGILVGTAAMATLEA 655 (3089)
T ss_dssp --CSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCCCSEEECSSTTTTCTTS
T ss_pred --CcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCCCCEEEecHHHHhCccc
Confidence 22244555634433332 279999999999999999999 9999999999999875443
No 72
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=98.72 E-value=1e-07 Score=93.60 Aligned_cols=90 Identities=6% Similarity=-0.157 Sum_probs=68.2
Q ss_pred HHHHhhcC-CCEEEEecCC---------------HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCC
Q 017718 215 KWLQTITK-LPILVKGVLT---------------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 278 (367)
Q Consensus 215 ~~l~~~~~-~Pv~vK~v~~---------------~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~ 278 (367)
+.+|+.++ .||.+|+... .+.++.+.++|+|+|.+++.+-.. ...+ .+ +.++++.+ ++
T Consensus 235 ~aVr~avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~--~~~~-~~-~~~ir~~~--~i 308 (379)
T 3aty_A 235 KSVCDAVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN--QQIG-DV-VAWVRGSY--SG 308 (379)
T ss_dssp HHHHHHHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS--CCCC-CH-HHHHHTTC--CS
T ss_pred HHHHHhcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC--CCcc-HH-HHHHHHHC--CC
Confidence 37888775 4899998742 133778889999999997632111 1111 25 66777666 79
Q ss_pred cEEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 279 PVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
|||++||| +++++.++|+.| ||+|++||+++.
T Consensus 309 Pvi~~G~i-t~~~a~~~l~~g~aD~V~igR~~l~ 341 (379)
T 3aty_A 309 VKISNLRY-DFEEADQQIREGKVDAVAFGAKFIA 341 (379)
T ss_dssp CEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHH
T ss_pred cEEEECCC-CHHHHHHHHHcCCCeEEEecHHHHh
Confidence 99999999 999999999998 999999999986
No 73
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.71 E-value=3e-07 Score=82.05 Aligned_cols=160 Identities=11% Similarity=0.049 Sum_probs=97.6
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+.+...++++.+.+.|++.+-+++.+|..-.--+.+|..+ |+..... ..... .. ...........|--
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~--~~~~~ig-~~~v~--~~-----~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLK--EKGAIIG-AGTVT--SV-----EQCRKAVESGAEFI 87 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHH--HTTCEEE-EESCC--SH-----HHHHHHHHHTCSEE
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHC--CCCcEEE-ecccC--CH-----HHHHHHHHcCCCEE
Confidence 667888889999999999999999998864211123333332 1111000 00000 00 00111111111111
Q ss_pred c--cHH----HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 212 L--SWK----WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 212 ~--~~~----~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
+ .+. ...+..++|++. ++.+.+++..+.+.|+|.|.+.. . .....+.++++++.++ ++||+++||
T Consensus 88 v~~~~~~~~~~~~~~~g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~--~-----~~~g~~~~~~l~~~~~-~~pvia~GG 158 (205)
T 1wa3_A 88 VSPHLDEEISQFCKEKGVFYMP-GVMTPTELVKAMKLGHTILKLFP--G-----EVVGPQFVKAMKGPFP-NVKFVPTGG 158 (205)
T ss_dssp ECSSCCHHHHHHHHHHTCEEEC-EECSHHHHHHHHHTTCCEEEETT--H-----HHHHHHHHHHHHTTCT-TCEEEEBSS
T ss_pred EcCCCCHHHHHHHHHcCCcEEC-CcCCHHHHHHHHHcCCCEEEEcC--c-----cccCHHHHHHHHHhCC-CCcEEEcCC
Confidence 2 232 222346788876 66788888899999999887742 1 1123455666655443 799999999
Q ss_pred CCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 286 VRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
|. .+++.+++.+|||+|.+||.++.
T Consensus 159 I~-~~~~~~~~~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 159 VN-LDNVCEWFKAGVLAVGVGSALVK 183 (205)
T ss_dssp CC-TTTHHHHHHHTCSCEEECHHHHC
T ss_pred CC-HHHHHHHHHCCCCEEEECccccC
Confidence 96 78999999999999999998764
No 74
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.67 E-value=2.4e-08 Score=94.75 Aligned_cols=112 Identities=21% Similarity=0.254 Sum_probs=81.8
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCC-----------------------CC-------ccchHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL-----------------------DY-------VPATIMALEEV 270 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~-----------------------~~-------~~~~~~~l~~i 270 (367)
.++++++ .+.+.+++.++.+.|+|.|.+.|.+|+.- +. ...+++.++++
T Consensus 124 ~g~~vvv-~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i 202 (297)
T 4adt_A 124 FKTPFVC-GCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLT 202 (297)
T ss_dssp CSSCEEE-EESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHH
T ss_pred CCCeEEE-EeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHH
Confidence 4678866 68899999999999999999987655431 01 13457788888
Q ss_pred HHHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCC
Q 017718 271 VKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGC 341 (367)
Q Consensus 271 ~~~~~~~~~vi--a~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~ 341 (367)
.+.+ ++||+ +.|||++++|+.+++.+|||+|++|+.++.+ ..+ ...++.+++.+..++...++
T Consensus 203 ~~~~--~iPVivvA~GGI~t~~dv~~~~~~GAdgVlVGsai~~a---~dp---~~~~~~l~~ai~~~~~~~~~ 267 (297)
T 4adt_A 203 RKLK--RLPVVNFAAGGIATPADAAMCMQLGMDGVFVGSGIFES---ENP---QKMASSIVMAVSNFNNPKIL 267 (297)
T ss_dssp HHHT--SCSSEEEEESCCCSHHHHHHHHHTTCSCEEESHHHHTS---SCH---HHHHHHHHHHHHTTTCHHHH
T ss_pred HHhc--CCCeEEEecCCCCCHHHHHHHHHcCCCEEEEhHHHHcC---CCH---HHHHHHHHHHHHhhCCHHHH
Confidence 8776 57776 9999999999999999999999999988752 122 23455555555544444443
No 75
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.66 E-value=4.5e-07 Score=84.94 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=69.2
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCC
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 300 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGA 300 (367)
.++-+++ .+.+.++++++.++|+|.|-+.|...+++ ...++...++.+.++.++++|+.|||++++|+.++..+||
T Consensus 168 lGl~~lv-evh~~eEl~~A~~~ga~iIGinnr~l~t~---~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga 243 (272)
T 3tsm_A 168 LGMDALI-EVHDEAEMERALKLSSRLLGVNNRNLRSF---EVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSGI 243 (272)
T ss_dssp TTCEEEE-EECSHHHHHHHTTSCCSEEEEECBCTTTC---CBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTTC
T ss_pred cCCeEEE-EeCCHHHHHHHHhcCCCEEEECCCCCccC---CCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcCC
Confidence 4665544 46788999999999999988866543332 2345556667677766799999999999999999999999
Q ss_pred CEEEechHHHH
Q 017718 301 SGIFIGRPVVY 311 (367)
Q Consensus 301 d~V~ig~~~l~ 311 (367)
|+|.||++++.
T Consensus 244 ~gvLVG~almr 254 (272)
T 3tsm_A 244 GTFLIGESLMR 254 (272)
T ss_dssp CEEEECHHHHT
T ss_pred CEEEEcHHHcC
Confidence 99999999985
No 76
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.62 E-value=1.4e-06 Score=81.34 Aligned_cols=49 Identities=20% Similarity=0.285 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhh
Q 017718 264 IMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLA 314 (367)
Q Consensus 264 ~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~ 314 (367)
.+.+.++++.. ++||+++|||++++++.+++..|||+|.+|+++.....
T Consensus 194 ~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVVGSai~~~~~ 242 (268)
T 1qop_A 194 HHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAISGSAIVKIIE 242 (268)
T ss_dssp HHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHHHHH
T ss_pred HHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEEChHHhhhHh
Confidence 56777777655 79999999999999999999999999999999987643
No 77
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.62 E-value=3.1e-07 Score=86.19 Aligned_cols=88 Identities=23% Similarity=0.287 Sum_probs=69.1
Q ss_pred hcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC
Q 017718 220 ITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 299 (367)
Q Consensus 220 ~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG 299 (367)
.+++.+++ .+.+.++++.+.++|+|.|.+.|.- +..-...++.+.++.+.++.++|+++.|||++++|+.+++.+|
T Consensus 160 ~lGl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~---l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G 235 (272)
T 3qja_A 160 SLGMTALV-EVHTEQEADRALKAGAKVIGVNARD---LMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG 235 (272)
T ss_dssp HTTCEEEE-EESSHHHHHHHHHHTCSEEEEESBC---TTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT
T ss_pred HCCCcEEE-EcCCHHHHHHHHHCCCCEEEECCCc---ccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC
Confidence 35777654 5678899999999999999997532 2222234455666666565579999999999999999999999
Q ss_pred CCEEEechHHHH
Q 017718 300 ASGIFIGRPVVY 311 (367)
Q Consensus 300 Ad~V~ig~~~l~ 311 (367)
||+|.||++++.
T Consensus 236 adgvlVGsal~~ 247 (272)
T 3qja_A 236 ADAVLVGEGLVT 247 (272)
T ss_dssp CSEEEECHHHHT
T ss_pred CCEEEEcHHHhC
Confidence 999999999975
No 78
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.59 E-value=2.3e-07 Score=84.69 Aligned_cols=91 Identities=20% Similarity=0.276 Sum_probs=68.7
Q ss_pred HHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEE--EEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 216 WLQTIT-KLPILVKGVLTAEDARIAVQAGAAGI--IVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i--~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+++.+ +.++++ .+.+.++++.+.++|+|+| .+.+..........+.++.++++++. ++||+++|||++.+|+
T Consensus 126 ~i~~~~~~~~v~~-~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~ 201 (234)
T 1yxy_A 126 QVKEKYPNQLLMA-DISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA---GIAVIAEGKIHSPEEA 201 (234)
T ss_dssp HHHHHCTTCEEEE-ECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHH
T ss_pred HHHHhCCCCeEEE-eCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHH
Confidence 666655 566655 5678899999999999999 45432111111223467778877653 6999999999999999
Q ss_pred HHHHHcCCCEEEechHHH
Q 017718 293 FKALALGASGIFIGRPVV 310 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~~l 310 (367)
.+++.+|||+|++||+++
T Consensus 202 ~~~~~~Gad~v~vGsal~ 219 (234)
T 1yxy_A 202 KKINDLGVAGIVVGGAIT 219 (234)
T ss_dssp HHHHTTCCSEEEECHHHH
T ss_pred HHHHHCCCCEEEEchHHh
Confidence 999999999999999875
No 79
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.59 E-value=2.4e-07 Score=86.49 Aligned_cols=184 Identities=18% Similarity=0.175 Sum_probs=111.2
Q ss_pred eeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHhhC-C-CceEEEEeecCC----H--HHHH
Q 017718 68 FKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVASTG-P-GIRFFQLYVYKD----R--NVVA 139 (367)
Q Consensus 68 ~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~~~-~-~~~~~QLy~~~d----~--~~~~ 139 (367)
..+..|+.++||.... + =..+++++.+.|+..++.+.. ..+.+.+.. . .+..+|+....+ . +...
T Consensus 30 ~~id~~~~l~p~~~~~--~---~~~~~~~~~~~g~~~i~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~~ 102 (273)
T 2qjg_A 30 VPMDHGVSNGPIKGLI--D---IRKTVNDVAEGGANAVLLHKG--IVRHGHRGYGKDVGLIIHLSGGTAISPNPLKKVIV 102 (273)
T ss_dssp EECCHHHHHCSCTTSS--S---HHHHHHHHHHHTCSEEEECHH--HHHSCCCSSSCCCEEEEECEECCTTSSSTTCCEEC
T ss_pred EEcccccccCCCcchh--h---HHHHHHHHHhcCCCEEEeCHH--HHHHHHHhhcCCCCEEEEEcCCCcCCCCcccchHH
Confidence 4456677788874322 1 136899999999988764320 001011111 1 355667654321 1 1113
Q ss_pred HHHHHHHHcCCcEEE--EecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 140 QLVRRAERAGFKAIA--LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 140 ~~l~ra~~~G~~ai~--itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
+.++++.+.|++.+. ++..++. .+ ...+.+. ....+
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~--~~---------------------------------~~~~~~~-------~v~~~ 140 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDE--DW---------------------------------EAYRDLG-------MIAET 140 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTT--HH---------------------------------HHHHHHH-------HHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCCC--HH---------------------------------HHHHHHH-------HHHHH
Confidence 457788889999994 4333321 00 0000000 11122
Q ss_pred HhhcCCCEEEEec---------CCH---HHH-HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 218 QTITKLPILVKGV---------LTA---EDA-RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 218 ~~~~~~Pv~vK~v---------~~~---~~a-~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
.+.+++|+++... .+. +++ +.+.++|+|+|.++. +..++.+.++.+.+ ++||++.|
T Consensus 141 ~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvva~G 209 (273)
T 2qjg_A 141 CEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVVVAG 209 (273)
T ss_dssp HHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEEEEC
T ss_pred HHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEEEEe
Confidence 2246889888741 233 344 889999999999863 13577888888776 79999999
Q ss_pred CCCC--HHH----HHHHHHcCCCEEEechHHHH
Q 017718 285 GVRR--GTD----VFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 285 GI~~--~~d----v~kal~lGAd~V~ig~~~l~ 311 (367)
||.+ .+| +.+++.+||++|.+||.++.
T Consensus 210 Gi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~ 242 (273)
T 2qjg_A 210 GPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQ 242 (273)
T ss_dssp CSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhC
Confidence 9995 778 55556799999999998864
No 80
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.58 E-value=2.8e-08 Score=94.23 Aligned_cols=122 Identities=20% Similarity=0.245 Sum_probs=89.4
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC---------------------CCC---------ccchHHHHHHHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------LDY---------VPATIMALEEVV 271 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~---------------------~~~---------~~~~~~~l~~i~ 271 (367)
++++++. +.+++++..+.++|+|+|.+.+..+.. ... .+..++.+.+++
T Consensus 125 ~i~l~~~-v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~ 203 (297)
T 2zbt_A 125 KVPFVCG-ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVH 203 (297)
T ss_dssp SSCEEEE-ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHH
T ss_pred CceEEee-cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHH
Confidence 6777754 568888999999999999885310100 000 123456677777
Q ss_pred HHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcc
Q 017718 272 KATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITR 349 (367)
Q Consensus 272 ~~~~~~~~vi--a~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~ 349 (367)
+.. ++|++ ++|||++++|+.+++.+|||+|++||.++.+ .. ....++.+++.++.++...++.++.++.+
T Consensus 204 ~~~--~~pvi~~a~GGI~~~e~i~~~~~aGadgvvvGsai~~~---~d---p~~~~~~l~~~i~~~~~~~~~~~~~~~~g 275 (297)
T 2zbt_A 204 DHG--RLPVVNFAAGGIATPADAALMMHLGMDGVFVGSGIFKS---GD---PRKRARAIVRAVAHYNDPEVLAEVSEDLG 275 (297)
T ss_dssp HHS--SCSSCEEBCSSCCSHHHHHHHHHTTCSEEEECGGGGGS---SC---HHHHHHHHHHHHHTTTCHHHHHHHHTTCC
T ss_pred Hhc--CCCcEEEeeCCCCCHHHHHHHHHcCCCEEEEchHHhCC---CC---HHHHHHHHHHHHHHHhchHhhhHHHHhcC
Confidence 765 68888 9999999999999999999999999988631 12 23566777777777777777788888887
Q ss_pred cce
Q 017718 350 DHI 352 (367)
Q Consensus 350 ~~l 352 (367)
..+
T Consensus 276 ~~~ 278 (297)
T 2zbt_A 276 EPM 278 (297)
T ss_dssp CCC
T ss_pred cee
Confidence 663
No 81
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.57 E-value=2.4e-06 Score=79.97 Aligned_cols=82 Identities=23% Similarity=0.268 Sum_probs=60.7
Q ss_pred CCHHHHHHHHHcCCcEEEE-cCCC--CCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 231 LTAEDARIAVQAGAAGIIV-SNHG--ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~v-s~~g--g~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.+.+.++.+.+.+-++|.+ |..| |..........+.+.++++.. ++||++.+||++++++.+++..|||+|.+|+
T Consensus 161 t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 161 ASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp CCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred CCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 4567888888888888886 4333 221111223446777877765 7999999999999999999999999999999
Q ss_pred HHHHHhh
Q 017718 308 PVVYSLA 314 (367)
Q Consensus 308 ~~l~~l~ 314 (367)
+++..+.
T Consensus 239 Aiv~~i~ 245 (271)
T 3nav_A 239 AVVKIIE 245 (271)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 82
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=98.54 E-value=1.2e-06 Score=83.49 Aligned_cols=45 Identities=38% Similarity=0.626 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCCCcE--EEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 265 MALEEVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 265 ~~l~~i~~~~~~~~~v--ia~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+.|+++.+.. ++|| |+.|||.+++|+.+++.+|||+|+||+.++.
T Consensus 230 ell~~i~~~~--~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~VGsaI~~ 276 (330)
T 2yzr_A 230 EVLLEVKKLG--RLPVVNFAAGGVATPADAALMMQLGSDGVFVGSGIFK 276 (330)
T ss_dssp HHHHHHHHHT--SCSSEEEECSCCCSHHHHHHHHHTTCSCEEESHHHHT
T ss_pred HHHHHHHHhC--CCCeEEEEECCCCCHHHHHHHHHcCcCEEeeHHHHhc
Confidence 6667776654 7888 6999999999999999999999999998874
No 83
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=98.51 E-value=6.9e-06 Score=79.92 Aligned_cols=93 Identities=15% Similarity=0.009 Sum_probs=61.6
Q ss_pred HHHhhcC-CCEEEEecCC-----------H----HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCc
Q 017718 216 WLQTITK-LPILVKGVLT-----------A----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 279 (367)
Q Consensus 216 ~l~~~~~-~Pv~vK~v~~-----------~----~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~ 279 (367)
.+|+.++ -+|.+|+..+ . ..++.+.+.|++.+.++...-..............++++.. ..|
T Consensus 211 avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~--~~~ 288 (358)
T 4a3u_A 211 RVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF--KPP 288 (358)
T ss_dssp HHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC--CSC
T ss_pred HHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhc--CCc
Confidence 7777763 4688888621 1 23667788999999997522111111111112234555554 556
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEechHHHH
Q 017718 280 VFLDGGVRRGTDVFKALALG-ASGIFIGRPVVY 311 (367)
Q Consensus 280 via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~ 311 (367)
|+ .||+.+++.+.++|+-| ||+|.+||++|.
T Consensus 289 v~-~~g~~~~~~ae~~l~~G~aD~V~~gR~~la 320 (358)
T 4a3u_A 289 LV-LNQDYTFETAQAALDSGVADAISFGRPFIG 320 (358)
T ss_dssp EE-EESSCCHHHHHHHHHHTSCSEEEESHHHHH
T ss_pred EE-EeCCCCHHHHHHHHHcCCceEeHhhHHHHh
Confidence 65 57889999999999999 999999999985
No 84
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.51 E-value=7.2e-07 Score=80.09 Aligned_cols=109 Identities=16% Similarity=0.167 Sum_probs=75.7
Q ss_pred HhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 218 QTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 218 ~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
++..+.++++. +.+++++..+.+.|+|+|.+.. + .+..++.+.++++.++.++||+++|||. .+++.+++.
T Consensus 97 ~~~~g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~-t------~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~ 167 (212)
T 2v82_A 97 AVGYGMTVCPG-CATATEAFTALEAGAQALKIFP-S------SAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWID 167 (212)
T ss_dssp HHHTTCEEECE-ECSHHHHHHHHHTTCSEEEETT-H------HHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHH
T ss_pred HHHcCCCEEee-cCCHHHHHHHHHCCCCEEEEec-C------CCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHH
Confidence 34457776554 7889999999999999998832 1 1223566777766552259999999997 999999999
Q ss_pred cCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHH
Q 017718 298 LGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMA 337 (367)
Q Consensus 298 lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~ 337 (367)
+||++|.+|+.++.+. +..+...+.++.+++.++...+
T Consensus 168 ~Ga~gv~vGsai~~~~--~~~~d~~~~~~~l~~~~~~~~~ 205 (212)
T 2v82_A 168 AGCAGAGLGSDLYRAG--QSVERTAQQAAAFVKAYREAVQ 205 (212)
T ss_dssp HTCSEEEECTTTCCTT--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEChHHhCCC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875320 0113344555556555554443
No 85
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=98.50 E-value=3.8e-08 Score=93.79 Aligned_cols=121 Identities=20% Similarity=0.283 Sum_probs=83.5
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC---------------------C--CC-------ccchHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------L--DY-------VPATIMALEEV 270 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~---------------------~--~~-------~~~~~~~l~~i 270 (367)
+++|+++ .+.+.+++.++.+.|+|+|.++|..|+. . +. .+..++.+.++
T Consensus 124 ~g~~v~~-~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i 202 (305)
T 2nv1_A 124 YTVPFVC-GCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQI 202 (305)
T ss_dssp CSSCEEE-EESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHH
T ss_pred cCCcEEE-EeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHH
Confidence 4677765 6678888888899999999996422210 0 00 22356777777
Q ss_pred HHHhcCCCcEE--EecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 017718 271 VKATQGRIPVF--LDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 348 (367)
Q Consensus 271 ~~~~~~~~~vi--a~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~ 348 (367)
.+.. ++||+ ++|||.+++|+.+++.+|||+|++||.++.. ..+ ...++.+++.+..++...+..++.++.
T Consensus 203 ~~~~--~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~---~~p---~~~~~~l~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 2nv1_A 203 KKDG--KLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKS---DNP---AKFAKAIVEATTHFTDYKLIAELSKEL 274 (305)
T ss_dssp HHHT--SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGS---SCH---HHHHHHHHHHHHTTTCHHHHHHHTSCC
T ss_pred HHhc--CCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcC---CCH---HHHHHHHHHHHHHhcChhhHHHHHHHh
Confidence 7765 78998 9999999999999999999999999988742 122 235556666666665555555555554
Q ss_pred cc
Q 017718 349 RD 350 (367)
Q Consensus 349 ~~ 350 (367)
+.
T Consensus 275 g~ 276 (305)
T 2nv1_A 275 GT 276 (305)
T ss_dssp --
T ss_pred hh
Confidence 43
No 86
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.49 E-value=2.5e-07 Score=85.88 Aligned_cols=89 Identities=27% Similarity=0.444 Sum_probs=70.9
Q ss_pred hcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCC---------------------C-C---------CccchHHHHH
Q 017718 220 ITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQ---------------------L-D---------YVPATIMALE 268 (367)
Q Consensus 220 ~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~---------------------~-~---------~~~~~~~~l~ 268 (367)
..++|+ +.++.+.++|.++++.|+|.|-..+..|+. + + .-.++++.|.
T Consensus 113 ~f~vpf-v~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~ 191 (291)
T 3o07_A 113 KFKVPF-VCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLK 191 (291)
T ss_dssp GCSSCE-EEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHH
T ss_pred cCCCcE-EeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHH
Confidence 357777 568899999999999999999987553331 1 0 0134678899
Q ss_pred HHHHHhcCCCcE--EEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 269 EVVKATQGRIPV--FLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 269 ~i~~~~~~~~~v--ia~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
++++.. ++|| |++|||.|++|+.+++.+|||+|++||.++.
T Consensus 192 ~Ike~~--~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 192 DVLEKG--KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFK 234 (291)
T ss_dssp HHHHHT--SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGG
T ss_pred HHHHcc--CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhC
Confidence 988875 7888 5699999999999999999999999997754
No 87
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.49 E-value=3.7e-06 Score=78.89 Aligned_cols=91 Identities=22% Similarity=0.240 Sum_probs=63.7
Q ss_pred HHHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 215 KWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-----~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
..+++..+-| ++|.+ .+.++ ++.+.++|+|+|-.| +|-......+.....++++.+..+.+++|.++||
T Consensus 165 ~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS-TGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGG 242 (288)
T 3oa3_A 165 RAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAGADYVKTS-TGFNGPGASIENVSLMSAVCDSLQSETRVKASGG 242 (288)
T ss_dssp HHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC-CSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESS
T ss_pred HHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcC-CCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCC
Confidence 3666665556 47876 34455 678899999999987 3321111123355556666554456899999999
Q ss_pred CCCHHHHHHHHHcCCCEEEech
Q 017718 286 VRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~ig~ 307 (367)
|++.+|+++++.+||+.++..+
T Consensus 243 Irt~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 243 IRTIEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp CCSHHHHHHHHHTTCSEEEESC
T ss_pred CCCHHHHHHHHHcCCceeehhh
Confidence 9999999999999999665544
No 88
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.47 E-value=5.9e-06 Score=77.20 Aligned_cols=82 Identities=20% Similarity=0.242 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHcCCcEEEE-cCCCCCCCCC--ccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 231 LTAEDARIAVQAGAAGIIV-SNHGARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~v-s~~gg~~~~~--~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.+.+..+.+.+.+-++|.+ |..|.+.... .....+.+.++++.. ++||++.|||++++++.+++..|||+|.+|+
T Consensus 159 t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 159 ADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp CCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 4567788888887777776 4444332211 233456777777654 7999999999999999999999999999999
Q ss_pred HHHHHhh
Q 017718 308 PVVYSLA 314 (367)
Q Consensus 308 ~~l~~l~ 314 (367)
+++..+.
T Consensus 237 aiv~~i~ 243 (267)
T 3vnd_A 237 AVVKIIE 243 (267)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 89
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.45 E-value=8.1e-07 Score=81.70 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=62.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.+.|++.|.+.+.+..+...++ .++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|++++.
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc
Confidence 57789999999999998632211122233 688899998877 89999999999999999999999999999999875
No 90
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.44 E-value=9.8e-06 Score=75.18 Aligned_cols=112 Identities=20% Similarity=0.257 Sum_probs=72.4
Q ss_pred cCCCEEEEec--CCHHHHHHHHHcCCcEEEEcCCCC---CCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 221 TKLPILVKGV--LTAEDARIAVQAGAAGIIVSNHGA---RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 221 ~~~Pv~vK~v--~~~~~a~~~~~~G~d~i~vs~~gg---~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
.++++++-.. .+.+.++.+.+.+.+++.+....| ......+...+.+.++++.. ++||++.|||.+++++.++
T Consensus 142 ~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~ 219 (262)
T 1rd5_A 142 NNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQI 219 (262)
T ss_dssp TTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHH
T ss_pred cCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHH
Confidence 3555444333 445666676777766665533333 21122234567788888766 7999999999999999999
Q ss_pred HHcCCCEEEechHHHHHhhc-cChHHHHHHHHHHHHHHHH
Q 017718 296 LALGASGIFIGRPVVYSLAA-EGEKGVRRVLEMLREEFEL 334 (367)
Q Consensus 296 l~lGAd~V~ig~~~l~~l~~-~G~~~v~~~i~~l~~el~~ 334 (367)
+.+|||+|.+|++++..... ..+....+.+..+.++|+.
T Consensus 220 ~~~GAdgvvVGSai~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (262)
T 1rd5_A 220 AQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKN 259 (262)
T ss_dssp HHTTCSEEEECHHHHHHHHSSSSHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEChHHHhHHHhccChhHHHHHHHHHHHHHHH
Confidence 99999999999999876532 1222222344555555543
No 91
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.44 E-value=2.5e-06 Score=77.10 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=61.8
Q ss_pred ecCCHHHHHHHHHcCCcEEEEcCCCCCC-CCC-ccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 229 GVLTAEDARIAVQAGAAGIIVSNHGARQ-LDY-VPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 229 ~v~~~~~a~~~~~~G~d~i~vs~~gg~~-~~~-~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.+.++++.+.+.|+|+|.+++..+++ ..+ .+..++.++++.+.. ++||+++||| +++++.+++.+||++|.+|
T Consensus 116 sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 116 SVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp EECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHHTTCSEEEES
T ss_pred EcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHHcCCCEEEEh
Confidence 3468899999999999999986532222 112 134577788887765 7999999999 9999999999999999999
Q ss_pred hHHHH
Q 017718 307 RPVVY 311 (367)
Q Consensus 307 ~~~l~ 311 (367)
+.++.
T Consensus 193 s~i~~ 197 (221)
T 1yad_A 193 SGIFS 197 (221)
T ss_dssp HHHHT
T ss_pred HHhhC
Confidence 98864
No 92
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.43 E-value=1.2e-06 Score=79.81 Aligned_cols=76 Identities=21% Similarity=0.322 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.+.|+|.|.+.+........+ ..++.+.++++.. ++||+++|||.+.+|+.+++.+|||+|++||.++.
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHHHHHHHc
Confidence 4668899999999999854211111112 3577888888766 79999999999999999999999999999998864
No 93
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.41 E-value=2.7e-06 Score=78.07 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=67.8
Q ss_pred cCCCEEEEec-CCHHHHHHHHHcCCc-EEEE-cCCC--CCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 221 TKLPILVKGV-LTAEDARIAVQAGAA-GIIV-SNHG--ARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 221 ~~~Pv~vK~v-~~~~~a~~~~~~G~d-~i~v-s~~g--g~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
.+..+++-.. .+..+.......++| .|.+ +-.| |......+...+.+.++++.. ++||+++|||++++++.++
T Consensus 132 ~g~~~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~ 209 (248)
T 1geq_A 132 EGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSL 209 (248)
T ss_dssp HTCEEEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHH
T ss_pred hCCCeEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHH
Confidence 4555555433 244444444444577 4433 2222 111111234577888888776 7999999999999999999
Q ss_pred HHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHH
Q 017718 296 LALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEF 332 (367)
Q Consensus 296 l~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el 332 (367)
+.+|||+|.+|++++.....+. +.+.++++.+++.|
T Consensus 210 ~~~Gad~vivGsai~~~~~~~~-~~~~~~~~~~~~~~ 245 (248)
T 1geq_A 210 LKEGANGVVVGSALVKIIGEKG-REATEFLKKKVEEL 245 (248)
T ss_dssp HHTTCSEEEECHHHHHHHHHHG-GGCHHHHHHHHHHH
T ss_pred HHcCCCEEEEcHHHHhhHhhCh-HHHHHHHHHHHHHh
Confidence 9999999999999876532111 44555555555544
No 94
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.40 E-value=9.6e-06 Score=75.51 Aligned_cols=61 Identities=18% Similarity=0.242 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHH
Q 017718 265 MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 265 ~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l 328 (367)
+.+.++++.. ++||++.+||++++++.+ +..|||+|.+||.+.........+.+.++++.+
T Consensus 196 ~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIVGSai~~~~~~~~~~~~~~~~~~~ 256 (262)
T 2ekc_A 196 KKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVVGSALVKLAGQKKIEDLGNLVKEL 256 (262)
T ss_dssp HHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEECHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEECHHHHhhhhhhhHHHHHHHHHHH
Confidence 4566666654 799999999999999999 888999999999998764322233344443333
No 95
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.38 E-value=5.8e-06 Score=75.71 Aligned_cols=87 Identities=26% Similarity=0.240 Sum_probs=62.1
Q ss_pred HHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017718 216 WLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-----~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI 286 (367)
.+++..+- ..+|.+ ++.+. ++.+.++|+|+|..|. | +..+..+++.+..+++.++.+++|-++|||
T Consensus 135 ~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTST-G---f~~ggAt~~dv~lmr~~vg~~v~VKasGGI 209 (239)
T 3ngj_A 135 AVVDASGK-ALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTST-G---FGTHGATPEDVKLMKDTVGDKALVKAAGGI 209 (239)
T ss_dssp HHHHHHTT-SEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC-S---SSSCCCCHHHHHHHHHHHGGGSEEEEESSC
T ss_pred HHHHHhcC-CceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECCC-C---CCCCCCCHHHHHHHHHhhCCCceEEEeCCC
Confidence 55555542 256655 45544 4456899999999873 2 112334556665566666778999999999
Q ss_pred CCHHHHHHHHHcCCCEEEech
Q 017718 287 RRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~ 307 (367)
|+.+|+++++.+||+.++..+
T Consensus 210 rt~~da~~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 210 RTFDDAMKMINNGASRIGASA 230 (239)
T ss_dssp CSHHHHHHHHHTTEEEEEESC
T ss_pred CCHHHHHHHHHhcccceeccc
Confidence 999999999999999877665
No 96
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.38 E-value=1e-06 Score=80.98 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=60.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.+.|++.|.+++........+ ..++.+.++++.+ ++|||++|||++.+|+.+++.+|||+|++|++++.
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~vGsal~~ 229 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 229 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHHHHHHHc
Confidence 4668999999999999853211111122 3678888887655 79999999999999999999999999999998875
No 97
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.36 E-value=7.1e-06 Score=73.31 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=64.0
Q ss_pred cCCCEEEEe--cCCH-HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 221 TKLPILVKG--VLTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 221 ~~~Pv~vK~--v~~~-~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
.++++++-. ..+. +.++.+.+.|+|+|.+.. |......++...+.+.++++.+. ++||+++|||+ ++++.+++.
T Consensus 102 ~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~-g~~g~~~~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~~~~~~~~~ 178 (211)
T 3f4w_A 102 AGKQVVVDMICVDDLPARVRLLEEAGADMLAVHT-GTDQQAAGRKPIDDLITMLKVRR-KARIAVAGGIS-SQTVKDYAL 178 (211)
T ss_dssp HTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEEC-CHHHHHTTCCSHHHHHHHHHHCS-SCEEEEESSCC-TTTHHHHHT
T ss_pred cCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEcC-CCcccccCCCCHHHHHHHHHHcC-CCcEEEECCCC-HHHHHHHHH
Confidence 466666532 2343 668999999999988752 21101112235677888877653 69999999996 999999999
Q ss_pred cCCCEEEechHHHH
Q 017718 298 LGASGIFIGRPVVY 311 (367)
Q Consensus 298 lGAd~V~ig~~~l~ 311 (367)
+|||+|.+||+++.
T Consensus 179 ~Gad~vvvGsai~~ 192 (211)
T 3f4w_A 179 LGPDVVIVGSAITH 192 (211)
T ss_dssp TCCSEEEECHHHHT
T ss_pred cCCCEEEECHHHcC
Confidence 99999999998764
No 98
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.35 E-value=1.3e-06 Score=80.59 Aligned_cols=80 Identities=15% Similarity=0.153 Sum_probs=63.5
Q ss_pred ecCCHHHHHHHHHcCCcEEEEcCC-CCCCCCCccchHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 229 GVLTAEDARIAVQAGAAGIIVSNH-GARQLDYVPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 229 ~v~~~~~a~~~~~~G~d~i~vs~~-gg~~~~~~~~~~~~l~~i~~~~~~~-~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
...+++.++++.+.|+++|.--+. -|+ ..|..+.+.|..+++.. .+ +|||++|||.+++|+.+++.+|||+|++|
T Consensus 131 ~~~D~~~ak~l~~~G~~aVmPlg~pIGs--G~Gi~~~~~L~~i~~~~-~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 131 MGPDLVLAKRLAALGTATVMPLAAPIGS--GWGVRTRALLELFAREK-ASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp ECSCHHHHHHHHHHTCSCBEEBSSSTTT--CCCSTTHHHHHHHHHTT-TTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred cCCCHHHHHHHHhcCCCEEEecCccCcC--CcccCCHHHHHHHHHhc-CCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 357899999999999999966332 122 12455677788887622 26 99999999999999999999999999999
Q ss_pred hHHHH
Q 017718 307 RPVVY 311 (367)
Q Consensus 307 ~~~l~ 311 (367)
+.+..
T Consensus 208 SAI~~ 212 (268)
T 2htm_A 208 TAIAE 212 (268)
T ss_dssp HHHHT
T ss_pred hHHhC
Confidence 98864
No 99
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.34 E-value=8.1e-07 Score=81.29 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---CCCEEEechHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGRPV 309 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l---GAd~V~ig~~~ 309 (367)
.+.++.+.+.|++.|.+++....+...+ ..++.+.++++.+ ++|||++|||.+.+|+.+++.+ |||+|++||++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al 228 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHH
Confidence 5778999999999999865211111123 3678888887655 7999999999999999999998 99999999998
Q ss_pred HH
Q 017718 310 VY 311 (367)
Q Consensus 310 l~ 311 (367)
+.
T Consensus 229 ~~ 230 (244)
T 2y88_A 229 YA 230 (244)
T ss_dssp HT
T ss_pred HC
Confidence 74
No 100
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=98.33 E-value=9e-07 Score=87.37 Aligned_cols=95 Identities=18% Similarity=0.028 Sum_probs=65.3
Q ss_pred HHHHhhcC-CCEEEEecC-----------C--------HHHHHHH---HHcC--CcEEEEcCCCC-CCCCCccc-hHHHH
Q 017718 215 KWLQTITK-LPILVKGVL-----------T--------AEDARIA---VQAG--AAGIIVSNHGA-RQLDYVPA-TIMAL 267 (367)
Q Consensus 215 ~~l~~~~~-~Pv~vK~v~-----------~--------~~~a~~~---~~~G--~d~i~vs~~gg-~~~~~~~~-~~~~l 267 (367)
+.+|+.++ .||.+|+.. + .+.++.+ .+.| +|+|.|+.... .+.+..+. .+..+
T Consensus 226 ~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~ 305 (407)
T 3tjl_A 226 DHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDN 305 (407)
T ss_dssp HHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCS
T ss_pred HHHHHHhCCCeEEEEECcccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHH
Confidence 37777775 489999873 2 1236677 7889 99999973111 11111111 11234
Q ss_pred HHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---C-CCEEEechHHHH
Q 017718 268 EEVVKATQGRIPVFLDGGVRRGTDVFKALAL---G-ASGIFIGRPVVY 311 (367)
Q Consensus 268 ~~i~~~~~~~~~via~GGI~~~~dv~kal~l---G-Ad~V~ig~~~l~ 311 (367)
..+++.+ ++|||++|||.+.+|+.+++.. | ||+|++||+++.
T Consensus 306 ~~ir~~~--~~PvI~~Ggi~~~~dA~~~i~~~~~g~aDlVa~GR~~ia 351 (407)
T 3tjl_A 306 EFVSKIW--KGVILKAGNYSYDAPEFKTLKEDIADKRTLVGFSRYFTS 351 (407)
T ss_dssp HHHHHHC--CSEEEEESCGGGGTTTTHHHHHHHTTSSEEEECSHHHHH
T ss_pred HHHHHHh--CCCEEecCCCCCHHHHHHHHHhhccCCCeEEEeChhhhh
Confidence 5566666 6899999999999988888776 5 999999999985
No 101
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.32 E-value=8.7e-07 Score=82.19 Aligned_cols=76 Identities=14% Similarity=0.177 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.+.|++.|.+++........+ ..++.+.++++.+ ++|||++|||++++|+.+++.+|||+|++|++++.
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~vgsal~~ 234 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 234 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESTTTC-
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHccHHHHc
Confidence 4557899999999999854221111223 3578888887765 89999999999999999999999999999998865
No 102
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.31 E-value=1.9e-06 Score=88.62 Aligned_cols=76 Identities=18% Similarity=0.118 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~-lGAd~V~ig~~~l~ 311 (367)
.+.++.+.++|++.|++.+-..-+...| +.++.+.++.+.+ ++|||++|||.+.+|+.+++. +||++|++||+++.
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~ 531 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHR 531 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHc
Confidence 5789999999999999854211112234 3799999998887 899999999999999999998 89999999998865
No 103
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.30 E-value=8.6e-07 Score=81.21 Aligned_cols=75 Identities=13% Similarity=0.200 Sum_probs=61.4
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc-----C-CCEEEech
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL-----G-ASGIFIGR 307 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l-----G-Ad~V~ig~ 307 (367)
+.++.+.+.|++.|.+++....+...+ +.++.+.++++.+ ++|||++|||++++|+.+++.+ | ||+|++|+
T Consensus 148 e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgs 224 (241)
T 1qo2_A 148 SLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGR 224 (241)
T ss_dssp HHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECH
T ss_pred HHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeH
Confidence 447889999999999965321111123 3688899998887 8999999999999999999998 9 99999999
Q ss_pred HHHH
Q 017718 308 PVVY 311 (367)
Q Consensus 308 ~~l~ 311 (367)
+++.
T Consensus 225 al~~ 228 (241)
T 1qo2_A 225 AFLE 228 (241)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9975
No 104
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.29 E-value=7.4e-06 Score=75.98 Aligned_cols=86 Identities=19% Similarity=0.212 Sum_probs=64.3
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~~~via~GGI~~~~dv~kal~ 297 (367)
.++-+.+ .+.+.+++..+.+.|+|.|-+.|..-+.. ...++.+.++.+.++. ++|+++.|||.+++|+.+++.
T Consensus 153 lGl~~lv-ev~~~~E~~~a~~~gad~IGvn~~~l~~~---~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~ 228 (254)
T 1vc4_A 153 LGLEALV-EVHTERELEIALEAGAEVLGINNRDLATL---HINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG 228 (254)
T ss_dssp HTCEEEE-EECSHHHHHHHHHHTCSEEEEESBCTTTC---CBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT
T ss_pred CCCeEEE-EECCHHHHHHHHHcCCCEEEEccccCcCC---CCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc
Confidence 4554433 34678888999999999998876543332 2234444555555543 689999999999999999999
Q ss_pred cCCCEEEechHHHH
Q 017718 298 LGASGIFIGRPVVY 311 (367)
Q Consensus 298 lGAd~V~ig~~~l~ 311 (367)
|||+|.||++++.
T Consensus 229 -Ga~gvlVGsAl~~ 241 (254)
T 1vc4_A 229 -LFDAVLIGTSLMR 241 (254)
T ss_dssp -TCSEEEECHHHHT
T ss_pred -CCCEEEEeHHHcC
Confidence 9999999999875
No 105
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.27 E-value=1.3e-06 Score=80.01 Aligned_cols=74 Identities=24% Similarity=0.303 Sum_probs=59.6
Q ss_pred HHHHHHHHHcCCcEEEEcCC--CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc---CCCEEEech
Q 017718 233 AEDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL---GASGIFIGR 307 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l---GAd~V~ig~ 307 (367)
.+.++.+.+.|++.|.+.+. +++ ..+ ..++.+.++++.+ ++||+++|||.+++|+.+++.+ |||+|++||
T Consensus 149 ~e~~~~~~~~G~~~i~~~~~~~~~~--~~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~ 223 (244)
T 1vzw_A 149 YETLDRLNKEGCARYVVTDIAKDGT--LQG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGK 223 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEEC---------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECH
T ss_pred HHHHHHHHhCCCCEEEEeccCcccc--cCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeH
Confidence 45679999999999998642 221 112 3688888888766 7999999999999999999999 999999999
Q ss_pred HHHH
Q 017718 308 PVVY 311 (367)
Q Consensus 308 ~~l~ 311 (367)
+++.
T Consensus 224 al~~ 227 (244)
T 1vzw_A 224 ALYA 227 (244)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 8874
No 106
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.26 E-value=2e-05 Score=72.92 Aligned_cols=87 Identities=25% Similarity=0.207 Sum_probs=62.7
Q ss_pred HHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017718 216 WLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-----~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI 286 (367)
.+++..+ ...+|.+ ++.+. ++.+.++|+|+|-.|. | +..+..+.+.+..+++.++.+++|-++|||
T Consensus 151 ~v~~a~~-~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTST-G---f~~~GAT~edV~lm~~~vg~~v~VKaAGGI 225 (260)
T 3r12_A 151 SVVESVK-GKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTST-G---FGTGGATAEDVHLMKWIVGDEMGVKASGGI 225 (260)
T ss_dssp HHHHHTT-TSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCC-S---SSSCCCCHHHHHHHHHHHCTTSEEEEESSC
T ss_pred HHHHhcC-CCcEEEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCC-C---CCCCCCCHHHHHHHHHHhCCCceEEEeCCC
Confidence 5555543 3345876 34333 5678899999999873 3 222335666666666667779999999999
Q ss_pred CCHHHHHHHHHcCCCEEEech
Q 017718 287 RRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~ 307 (367)
++.+|+++++.+||+-++..+
T Consensus 226 rt~~~al~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 226 RTFEDAVKMIMYGADRIGTSS 246 (260)
T ss_dssp CSHHHHHHHHHTTCSEEEESC
T ss_pred CCHHHHHHHHHcCCceeecch
Confidence 999999999999999765544
No 107
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.26 E-value=4e-05 Score=71.40 Aligned_cols=209 Identities=16% Similarity=0.198 Sum_probs=119.5
Q ss_pred ccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCC---------CCC------------CH---HHHHhhCC-Cce
Q 017718 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSW---------STS------------SV---EEVASTGP-GIR 125 (367)
Q Consensus 71 ~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~---------~~~------------~~---e~i~~~~~-~~~ 125 (367)
..|++-+..| .+ -.|+.+.+-|+.+.+--. ++. .+ +|+....+ .|.
T Consensus 27 ~~~iig~gaG-tG--------lsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV 97 (286)
T 2p10_A 27 GEPIIGGGAG-TG--------LSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPV 97 (286)
T ss_dssp TCCEEEEEES-SH--------HHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCE
T ss_pred CCceEEEecc-cc--------hhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCE
Confidence 3476655543 33 478999999999887311 110 01 13444333 589
Q ss_pred EEEEeecCCHH-HHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHh
Q 017718 126 FFQLYVYKDRN-VVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYV 204 (367)
Q Consensus 126 ~~QLy~~~d~~-~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (367)
+.|+. ..|+. .+...++.++++||.++ + |.|..|.=.-..|+. +
T Consensus 98 ~Agv~-~~DP~~~~g~~Le~lk~~Gf~Gv-~--N~ptvglidG~fr~~-------------------------------L 142 (286)
T 2p10_A 98 LAGVN-GTDPFMVMSTFLRELKEIGFAGV-Q--NFPTVGLIDGLFRQN-------------------------------L 142 (286)
T ss_dssp EEEEC-TTCTTCCHHHHHHHHHHHTCCEE-E--ECSCGGGCCHHHHHH-------------------------------H
T ss_pred EEEEC-CcCCCcCHHHHHHHHHHhCCceE-E--ECCCcccccchhhhh-------------------------------H
Confidence 99965 44543 56667789999999998 4 445422111001100 0
Q ss_pred hhccCccccH----HHHHhhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEcCC---CCC-CCCCccch---HHHHHHHHH
Q 017718 205 AGQIDRSLSW----KWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNH---GAR-QLDYVPAT---IMALEEVVK 272 (367)
Q Consensus 205 ~~~~d~~~~~----~~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~---gg~-~~~~~~~~---~~~l~~i~~ 272 (367)
. +..+.+ +.+++... --+.+--+.++++|+.+.++|+|.|++.-. ||. ......+. .+.+.++.+
T Consensus 143 -E--E~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~ 219 (286)
T 2p10_A 143 -E--ETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIE 219 (286)
T ss_dssp -H--HTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHH
T ss_pred -h--hcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHH
Confidence 0 111222 13333322 123333458999999999999999999421 121 01111122 334444443
Q ss_pred H---hcCCCcEEEec-CCCCHHHHHHHHHc--CCCEEEechHHHHHhhccChHHHHHHHHHHHHHHH
Q 017718 273 A---TQGRIPVFLDG-GVRRGTDVFKALAL--GASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 273 ~---~~~~~~via~G-GI~~~~dv~kal~l--GAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~ 333 (367)
+ +..++.|+.-| ||.+++|+.+++.+ |++++..++.+... + ++..+..+.++++
T Consensus 220 a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G~~G~~gASsier~------p-~e~ai~~~~~~fk 279 (286)
T 2p10_A 220 AARTIRDDIIILSHGGPIANPEDARFILDSCQGCHGFYGASSMERL------P-AEEAIRSQTLAFK 279 (286)
T ss_dssp HHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESHHHHHH------H-HHHHHHHHHHHHH
T ss_pred HHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCCccEEEeehhhhcC------C-HHHHHHHHHHHHH
Confidence 3 44467666655 99999999999999 99999999988764 1 3445555554443
No 108
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=98.24 E-value=1.8e-05 Score=79.06 Aligned_cols=114 Identities=15% Similarity=0.218 Sum_probs=85.1
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCC
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGA 300 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGA 300 (367)
.++-+++ .+.+.++++++.++|+|.|-+.|.+-++ -...++...++.+.++.++++|+.|||++++|+.++..+ |
T Consensus 156 lgm~~Lv-Evh~~eE~~~A~~lga~iIGinnr~L~t---~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~-a 230 (452)
T 1pii_A 156 LEMGVLT-EVSNEEEQERAIALGAKVVGINNRDLRD---LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF-A 230 (452)
T ss_dssp TTCEEEE-EECSHHHHHHHHHTTCSEEEEESEETTT---TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT-C
T ss_pred cCCeEEE-EeCCHHHHHHHHHCCCCEEEEeCCCCCC---CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh-C
Confidence 4666654 6789999999999999999887754332 234466666666667667899999999999999999999 9
Q ss_pred CEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 017718 301 SGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 348 (367)
Q Consensus 301 d~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~ 348 (367)
++|.||+.++.. +.....++.|.. .....||.++.+|+.
T Consensus 231 ~avLVGealmr~------~d~~~~~~~l~~---~~~KICGit~~eda~ 269 (452)
T 1pii_A 231 NGFLIGSALMAH------DDLHAAVRRVLL---GENKVCGLTRGQDAK 269 (452)
T ss_dssp SEEEECHHHHTC------SCHHHHHHHHHH---CSCEECCCCSHHHHH
T ss_pred CEEEEcHHHcCC------cCHHHHHHHHHH---HhccccCCCcHHHHH
Confidence 999999999853 112233333332 235688999988876
No 109
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.24 E-value=2.2e-05 Score=71.60 Aligned_cols=87 Identities=23% Similarity=0.288 Sum_probs=62.9
Q ss_pred HHHhhcCCCEEEEec-----C----CHHH----HHHHHHcCCcEEEEcCCCCCCCC-CccchHHHHHHHHHHhcCCCcEE
Q 017718 216 WLQTITKLPILVKGV-----L----TAED----ARIAVQAGAAGIIVSNHGARQLD-YVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-----~----~~~~----a~~~~~~G~d~i~vs~~gg~~~~-~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
.+++..+ ...+|.+ + +.+. ++.+.++|+|+|-.|. | +. .+..+.+.+..+++.++.+++|-
T Consensus 120 ~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVKTST-G---f~~~~gAt~edv~lm~~~v~~~v~VK 194 (231)
T 3ndo_A 120 AVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVKTST-G---FHPSGGASVQAVEIMARTVGERLGVK 194 (231)
T ss_dssp HHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEECCC-S---CCTTCSCCHHHHHHHHHHHTTTSEEE
T ss_pred HHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEEcCC-C---CCCCCCCCHHHHHHHHHHhCCCceEE
Confidence 5565554 3345876 3 4433 5678899999999873 2 11 23356666666667777799999
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEech
Q 017718 282 LDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
++|||++.+|+++++.+||+-++..+
T Consensus 195 aaGGIrt~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 195 ASGGIRTAEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp EESSCCSHHHHHHHHHTTCSEEEESS
T ss_pred EeCCCCCHHHHHHHHHhcchhcccch
Confidence 99999999999999999999665544
No 110
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.22 E-value=2.7e-05 Score=70.60 Aligned_cols=87 Identities=24% Similarity=0.342 Sum_probs=60.2
Q ss_pred HHHHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 214 WKWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 214 ~~~l~~~~~~Pv~vK~v-----~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
+..+++..+-+ .+|.+ .+.+. ++.+.++|+|+|-.|. | +..+..+.+.+..+++.++.++||-++|
T Consensus 109 i~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT-G---f~~~gat~~dv~~m~~~vg~~v~VkaaG 183 (220)
T 1ub3_A 109 VRAVREAVPQA-VLKVILETGYFSPEEIARLAEAAIRGGADFLKTST-G---FGPRGASLEDVALLVRVAQGRAQVKAAG 183 (220)
T ss_dssp HHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC-S---SSSCCCCHHHHHHHHHHHTTSSEEEEES
T ss_pred HHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC-C---CCCCCCCHHHHHHHHHhhCCCCeEEEEC
Confidence 33566554433 56644 34443 6788999999999873 2 1122345555555555566689999999
Q ss_pred CCCCHHHHHHHHHcCCCEEEe
Q 017718 285 GVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V~i 305 (367)
||++.+|+++++.+||+-++.
T Consensus 184 Girt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 184 GIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp SCCSHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHCCCcccch
Confidence 999999999999999994443
No 111
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.22 E-value=4.9e-05 Score=68.20 Aligned_cols=83 Identities=18% Similarity=0.175 Sum_probs=65.2
Q ss_pred hhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 219 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 219 ~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
+..++|+++ ++.+++++..+.+.|+|+|.+.. . ..-+| .+.|++++..++ ++|+++.|||. .+++..++++
T Consensus 101 ~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~fp--a-~~~gG---~~~lk~l~~~~~-~ipvvaiGGI~-~~n~~~~l~a 171 (207)
T 2yw3_A 101 QARGVPYLP-GVLTPTEVERALALGLSALKFFP--A-EPFQG---VRVLRAYAEVFP-EVRFLPTGGIK-EEHLPHYAAL 171 (207)
T ss_dssp HHHTCCEEE-EECSHHHHHHHHHTTCCEEEETT--T-TTTTH---HHHHHHHHHHCT-TCEEEEBSSCC-GGGHHHHHTC
T ss_pred HHhCCCEEe-cCCCHHHHHHHHHCCCCEEEEec--C-ccccC---HHHHHHHHhhCC-CCcEEEeCCCC-HHHHHHHHhC
Confidence 346788877 48899999999999999999942 1 11112 455677766553 79999999997 6999999999
Q ss_pred CCCEEEechHHH
Q 017718 299 GASGIFIGRPVV 310 (367)
Q Consensus 299 GAd~V~ig~~~l 310 (367)
||++|.+|+.++
T Consensus 172 Ga~~vavgSai~ 183 (207)
T 2yw3_A 172 PNLLAVGGSWLL 183 (207)
T ss_dssp SSBSCEEESGGG
T ss_pred CCcEEEEehhhh
Confidence 999999999765
No 112
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.19 E-value=8.7e-06 Score=73.45 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=67.7
Q ss_pred HHHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEcC--CCCCCCC-CccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 214 WKWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN--HGARQLD-YVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 214 ~~~l~~~~~~Pv~vK~-v~~~~~a~~~~~~G~d~i~vs~--~gg~~~~-~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+..+++..+. +++.. +.+.+++..+.+.|+|+|.++. .++.... ..+..++.+.++++.++ ++||++.|||. +
T Consensus 107 ~~~~~~~~g~-~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~ 183 (227)
T 2tps_A 107 AKEVRAAIGD-MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-I 183 (227)
T ss_dssp HHHHHHHHTT-SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-T
T ss_pred HHHHHHhcCC-cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-H
Confidence 3345554554 44443 3677888999999999999742 1211111 23345777888876552 39999999999 9
Q ss_pred HHHHHHHHcCCCEEEechHHHH
Q 017718 290 TDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+++.+++.+||++|.+|+.++.
T Consensus 184 ~nv~~~~~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 184 DNAAPVIQAGADGVSMISAISQ 205 (227)
T ss_dssp TTSHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEhHHhhc
Confidence 9999999999999999998864
No 113
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.19 E-value=3.8e-06 Score=77.23 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.|+.+.++|+|.|.++.-.+. .......++.+.++++.+ ++||+++|||++.+|+.+++..|||+|++|+.++
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l 112 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRD-GTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV 112 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTT-TCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCcc-cCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHh
Confidence 47789999999999998642111 112234678888887766 8999999999999999999999999999999876
No 114
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.18 E-value=1e-05 Score=74.54 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=67.0
Q ss_pred HHHHhhcCC-CEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCC--CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 215 KWLQTITKL-PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQL--DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 215 ~~l~~~~~~-Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~--~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
..+|+..+. .++---+.+.++++.+.+.|+|+|.+++-..+.. +..+..++.+.++.+....++||++.||| +.++
T Consensus 126 ~~~r~~~~~~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~n 204 (243)
T 3o63_A 126 NVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQR 204 (243)
T ss_dssp HHHHHHSCTTCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTT
T ss_pred HHHHHhhCCCCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHH
Confidence 355554432 2322235788999999999999999965222211 11233567777776532237999999999 8999
Q ss_pred HHHHHHcCCCEEEechHHHH
Q 017718 292 VFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~l~ 311 (367)
+.+++.+||++|.+++.++.
T Consensus 205 i~~~~~aGa~gvav~sai~~ 224 (243)
T 3o63_A 205 LPAVLDAGARRIVVVRAITS 224 (243)
T ss_dssp HHHHHHTTCCCEEESHHHHT
T ss_pred HHHHHHcCCCEEEEeHHHhC
Confidence 99999999999999998874
No 115
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=98.16 E-value=1.4e-05 Score=73.06 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=102.4
Q ss_pred EEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhh
Q 017718 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (367)
Q Consensus 126 ~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (367)
.+-+....+.+...++++.+.+.|++.+-+|+.+|..-.-.+.++..+ |. +... ..........+....+.++++-
T Consensus 36 vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~--~~-~~iG-aGTVlt~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 36 VIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQ--PE-MLIG-AGTILNGEQALAAKEAGATFVV 111 (232)
T ss_dssp EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHC--TT-CEEE-EECCCSHHHHHHHHHHTCSEEE
T ss_pred EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhC--CC-CEEe-ECCcCCHHHHHHHHHcCCCEEE
Confidence 344555677788888888888889999998888775322233444444 21 1110 0000000000000000111111
Q ss_pred hccCccccHH--HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 206 GQIDRSLSWK--WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 206 ~~~d~~~~~~--~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
-|.++-+ ...+..++|++. ++.++.++..+.++|+|.|-+.-.+ . .+ -.+.|+.++..++ ++|+++.
T Consensus 112 ---sP~~~~~vi~~~~~~gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa~--~-~g---G~~~lkal~~p~p-~ip~~pt 180 (232)
T 4e38_A 112 ---SPGFNPNTVRACQEIGIDIVP-GVNNPSTVEAALEMGLTTLKFFPAE--A-SG---GISMVKSLVGPYG-DIRLMPT 180 (232)
T ss_dssp ---CSSCCHHHHHHHHHHTCEEEC-EECSHHHHHHHHHTTCCEEEECSTT--T-TT---HHHHHHHHHTTCT-TCEEEEB
T ss_pred ---eCCCCHHHHHHHHHcCCCEEc-CCCCHHHHHHHHHcCCCEEEECcCc--c-cc---CHHHHHHHHHHhc-CCCeeeE
Confidence 1223222 222335888866 7889999999999999999985321 1 12 2466666655443 7999999
Q ss_pred cCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 284 GGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 284 GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
|||. .+++..++++||.++.+|+.+.
T Consensus 181 GGI~-~~n~~~~l~aGa~~~vgGs~l~ 206 (232)
T 4e38_A 181 GGIT-PSNIDNYLAIPQVLACGGTWMV 206 (232)
T ss_dssp SSCC-TTTHHHHHTSTTBCCEEECGGG
T ss_pred cCCC-HHHHHHHHHCCCeEEEECchhc
Confidence 9995 8999999999999999888654
No 116
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=98.14 E-value=7.5e-05 Score=68.76 Aligned_cols=89 Identities=12% Similarity=0.153 Sum_probs=70.4
Q ss_pred hhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 219 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 219 ~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
...++-++| .+-+.++.+++.+.|++.|-|-|. .+.+-....+...++...++.++.+|+.+||.+++|+.++...
T Consensus 150 ~~lGl~~Lv-EVh~~~El~rAl~~~a~iIGINNR---nL~tf~vdl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~ 225 (258)
T 4a29_A 150 RSYGMEPLI-LINDENDLDIALRIGARFIGIMSR---DFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKL 225 (258)
T ss_dssp HHTTCCCEE-EESSHHHHHHHHHTTCSEEEECSB---CTTTCCBCHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHT
T ss_pred HHHhHHHHH-hcchHHHHHHHhcCCCcEEEEeCC---CccccccCHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHC
Confidence 345776655 678899999999999998888663 3333334455555566666778899999999999999999999
Q ss_pred CCCEEEechHHHH
Q 017718 299 GASGIFIGRPVVY 311 (367)
Q Consensus 299 GAd~V~ig~~~l~ 311 (367)
|+|+|.||..+|.
T Consensus 226 G~~a~LVGealmr 238 (258)
T 4a29_A 226 GVNAFLISSSLMR 238 (258)
T ss_dssp TCCEEEECHHHHH
T ss_pred CCCEEEECHHHhC
Confidence 9999999999987
No 117
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.13 E-value=1.2e-05 Score=71.82 Aligned_cols=79 Identities=24% Similarity=0.289 Sum_probs=62.0
Q ss_pred cCCHHHHHHHHHcCCcEEEEcC--CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 230 VLTAEDARIAVQAGAAGIIVSN--HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 230 v~~~~~a~~~~~~G~d~i~vs~--~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+.+.+++..+.+.|+|+|.+++ .++......+..++.+.++++.. ++||++.|||. ++++.+++.+||++|.+|+
T Consensus 115 ~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 115 VYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp ESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESH
T ss_pred cCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhH
Confidence 4677888889999999999864 12111112345778888887766 79999999999 9999999999999999999
Q ss_pred HHHH
Q 017718 308 PVVY 311 (367)
Q Consensus 308 ~~l~ 311 (367)
.++.
T Consensus 192 ~i~~ 195 (215)
T 1xi3_A 192 AVMG 195 (215)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8864
No 118
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.09 E-value=4.6e-06 Score=77.68 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=58.8
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC--CCcEEEecCCCCHHHHHHHHHc--CCCEEEechHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGTDVFKALAL--GASGIFIGRPV 309 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~~~via~GGI~~~~dv~kal~l--GAd~V~ig~~~ 309 (367)
+.++.+.++ ++.|++++-..-+...|+ .++.+.++.+.++. ++|||++|||++.+|+.+++.+ ||++|++||++
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al 239 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSL 239 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTB
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCH
Confidence 778999999 999999542211223454 89999999887622 6999999999999999999998 99999999987
No 119
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.08 E-value=9e-05 Score=67.54 Aligned_cols=70 Identities=24% Similarity=0.283 Sum_probs=51.3
Q ss_pred chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHh
Q 017718 262 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALS 339 (367)
Q Consensus 262 ~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~ 339 (367)
..++.+.++++.. .+++|.++|||+ .+.+.++..+|||.+.+||+++-+ . .....++.++++++......
T Consensus 155 ~~l~ki~~lr~~~-~~~~I~VdGGI~-~~t~~~~~~aGAd~~VvGsaIf~a---~---dp~~~~~~l~~~~~~~~~~~ 224 (228)
T 3ovp_A 155 DMMPKVHWLRTQF-PSLDIEVDGGVG-PDTVHKCAEAGANMIVSGSAIMRS---E---DPRSVINLLRNVCSEAAQKR 224 (228)
T ss_dssp GGHHHHHHHHHHC-TTCEEEEESSCS-TTTHHHHHHHTCCEEEESHHHHTC---S---CHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc-CCCCEEEeCCcC-HHHHHHHHHcCCCEEEEeHHHhCC---C---CHHHHHHHHHHHHHHHHhhc
Confidence 4566677776654 368999999995 799999999999999999977531 1 22345677777777666544
No 120
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.08 E-value=4.7e-07 Score=83.37 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+.++.+.++|++.|.+++........+ +.++.+.++++.+ ++|||+.|||++.+|+.+++.+|||+|++||+++-
T Consensus 160 ~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~--~iPvia~GGI~~~~d~~~~~~~Gad~v~vg~al~~ 234 (247)
T 3tdn_A 160 DWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVSINTAAVE 234 (247)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHHcCCcHhhccHHHHc
Confidence 457888899999999865311111112 4567788887766 79999999999999999999999999999998874
No 121
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.06 E-value=0.0003 Score=63.71 Aligned_cols=183 Identities=16% Similarity=0.162 Sum_probs=106.3
Q ss_pred HHHHHHHHHcCCcee-ec----CC---CCCCHHH---HHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCC
Q 017718 91 YATARAASAAGTIMT-LS----SW---STSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (367)
Q Consensus 91 ~~~a~aa~~~G~~~~-vs----~~---~~~~~e~---i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~ 159 (367)
....+.+.+.|+.+. +. ++ .+...+. +.+..+.+.-+.|.. .|++. .++.+.++|++.+.++...
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv-~d~~~---~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMV-TNPSD---YVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEES-SCGGG---GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEe-cCHHH---HHHHHHHcCCCEEEECCCC
Confidence 356777788887653 22 11 1222333 333332355556665 45532 4667777899998887652
Q ss_pred CCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCc-cccHHHHHhhcCCCEEEEec--CCHHHH
Q 017718 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR-SLSWKWLQTITKLPILVKGV--LTAEDA 236 (367)
Q Consensus 160 p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~l~~~~~~Pv~vK~v--~~~~~a 236 (367)
+-. . .-..+.+++ .++++++-.. ...+..
T Consensus 98 ~~~-----------------------------------------------~~~~~~~~i~~-~g~~igv~~~p~t~~e~~ 129 (228)
T 1h1y_A 98 SRD-----------------------------------------------NWQELIQSIKA-KGMRPGVSLRPGTPVEEV 129 (228)
T ss_dssp CTT-----------------------------------------------THHHHHHHHHH-TTCEEEEEECTTSCGGGG
T ss_pred ccc-----------------------------------------------HHHHHHHHHHH-cCCCEEEEEeCCCCHHHH
Confidence 110 0 001123433 3556655442 223444
Q ss_pred HHHHHc--CCcEEEEcC-CCC-CCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 237 RIAVQA--GAAGIIVSN-HGA-RQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 237 ~~~~~~--G~d~i~vs~-~gg-~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+...+. ++|+|.+.. ++| ......+..++.+.++++... ++||+++|||.. +++.+++..|||.+.+||.++.+
T Consensus 130 ~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~~aGaD~vvvGsai~~~ 207 (228)
T 1h1y_A 130 FPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAASAGANCIVAGSSIFGA 207 (228)
T ss_dssp HHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHHHHTCCEEEESHHHHTS
T ss_pred HHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHHHcCCCEEEECHHHHCC
Confidence 555555 999998743 222 222234456677777777653 789999999987 78989999999999999987631
Q ss_pred hhccChHHHHHHHHHHHHHHH
Q 017718 313 LAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 313 l~~~G~~~v~~~i~~l~~el~ 333 (367)
.. ....++.+++.++
T Consensus 208 ---~d---~~~~~~~l~~~~~ 222 (228)
T 1h1y_A 208 ---AE---PGEVISALRKSVE 222 (228)
T ss_dssp ---SC---HHHHHHHHHHHHH
T ss_pred ---CC---HHHHHHHHHHHHH
Confidence 12 3344555555443
No 122
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=98.03 E-value=0.00014 Score=71.75 Aligned_cols=40 Identities=20% Similarity=0.129 Sum_probs=33.8
Q ss_pred HHHHhcCCCcEEEecCCCCHHHHHHHHHc-CCCEEEechHHHH
Q 017718 270 VVKATQGRIPVFLDGGVRRGTDVFKALAL-GASGIFIGRPVVY 311 (367)
Q Consensus 270 i~~~~~~~~~via~GGI~~~~dv~kal~l-GAd~V~ig~~~l~ 311 (367)
+++.+ ++|||+.|||.+..++.+.+.. +||+|.+||++|.
T Consensus 313 ir~~~--~~pvi~~G~~~~~~~~~~~~~~~~aDlV~~gR~~ia 353 (400)
T 4gbu_A 313 VYSIW--KGPVIRAGNFALHPEVVREEVKDKRTLIGYGRFFIS 353 (400)
T ss_dssp HHHHC--CSCEEEESSCTTCHHHHHHHTTSTTEEEECCHHHHH
T ss_pred HHHHh--CCCEEEeCCCCChHHHHHHHHcCCCeEhHHHHHHHH
Confidence 44455 7899999999998888888775 6999999999985
No 123
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.99 E-value=3.9e-05 Score=69.23 Aligned_cols=168 Identities=17% Similarity=0.189 Sum_probs=97.7
Q ss_pred hhHHHHHHHHHcCCcee-ecC-----CCCCCHHHHHhhCC-CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCC
Q 017718 89 GEYATARAASAAGTIMT-LSS-----WSTSSVEEVASTGP-GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (367)
Q Consensus 89 ~e~~~a~aa~~~G~~~~-vs~-----~~~~~~e~i~~~~~-~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~ 161 (367)
..+.+++.. +.|+.++ ++. +....++++++..+ .+.++-++....++. .++.+.++|++.+.++.-.+.
T Consensus 20 ~~~~~~~~~-~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~---~~~~~~~aGad~i~vh~~~~~ 95 (218)
T 3jr2_A 20 DAVAVASNV-ASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAI---LSRMAFEAGADWITVSAAAHI 95 (218)
T ss_dssp HHHHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHH---HHHHHHHHTCSEEEEETTSCH
T ss_pred HHHHHHHHh-cCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHH---HHHHHHhcCCCEEEEecCCCH
Confidence 345666664 3455544 331 12223456666544 345555554433433 567888899998877543210
Q ss_pred CCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEE--ecCCHHHHHHH
Q 017718 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVK--GVLTAEDARIA 239 (367)
Q Consensus 162 ~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK--~v~~~~~a~~~ 239 (367)
+ ...+ ..+.+++ .+++..+. ++.+.++++.+
T Consensus 96 ----~--------------------------------~~~~----------~~~~~~~-~g~~~~~d~l~~~T~~~~~~~ 128 (218)
T 3jr2_A 96 ----A--------------------------------TIAA----------CKKVADE-LNGEIQIEIYGNWTMQDAKAW 128 (218)
T ss_dssp ----H--------------------------------HHHH----------HHHHHHH-HTCEEEEECCSSCCHHHHHHH
T ss_pred ----H--------------------------------HHHH----------HHHHHHH-hCCccceeeeecCCHHHHHHH
Confidence 0 0000 0113333 35555432 33677888889
Q ss_pred HHcCCcEEEEcCC--CCC-CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 240 VQAGAAGIIVSNH--GAR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 240 ~~~G~d~i~vs~~--gg~-~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.|+|++.+.-. ++. .....+..++.++++. +.++|++++||| +.+++.+++.+|||.+.+||++..
T Consensus 129 ~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~---~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 129 VDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLS---ALGIELSITGGI-VPEDIYLFEGIKTKTFIAGRALAG 199 (218)
T ss_dssp HHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHH---HTTCEEEEESSC-CGGGGGGGTTSCEEEEEESGGGSH
T ss_pred HHcCccceeeeeccccccCCCcCCHHHHHHHHHHh---CCCCCEEEECCC-CHHHHHHHHHcCCCEEEEchhhcC
Confidence 9999999876310 110 0111233344444443 237999999999 589999999999999999998764
No 124
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.97 E-value=9.4e-05 Score=68.36 Aligned_cols=86 Identities=13% Similarity=0.160 Sum_probs=67.5
Q ss_pred cCCCEEEEecCCHHHHHHHHHc-CCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC
Q 017718 221 TKLPILVKGVLTAEDARIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG 299 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~-G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG 299 (367)
.++-+++ .+.+.++++++.++ |+|.|-+.|.+-+++ ...++...++.+.++..+++|+.|||.+++|+.++..+
T Consensus 149 lGl~~lv-Ev~~~eE~~~A~~l~g~~iIGinnr~l~t~---~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~- 223 (251)
T 1i4n_A 149 LGMDSLV-EVHSREDLEKVFSVIRPKIIGINTRDLDTF---EIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK- 223 (251)
T ss_dssp TTCEEEE-EECSHHHHHHHHTTCCCSEEEEECBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT-
T ss_pred cCCeEEE-EeCCHHHHHHHHhcCCCCEEEEeCcccccC---CCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh-
Confidence 4666654 57899999999999 999998977543222 23344444555555557899999999999999999999
Q ss_pred CCEEEechHHHH
Q 017718 300 ASGIFIGRPVVY 311 (367)
Q Consensus 300 Ad~V~ig~~~l~ 311 (367)
||+|.||+.++.
T Consensus 224 a~avLVG~aimr 235 (251)
T 1i4n_A 224 VNAVLVGTSIMK 235 (251)
T ss_dssp CSEEEECHHHHH
T ss_pred CCEEEEcHHHcC
Confidence 999999999986
No 125
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.96 E-value=0.0001 Score=68.12 Aligned_cols=86 Identities=17% Similarity=0.213 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHcCCcEEEEcCCCCC-CCCCc--cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 231 LTAEDARIAVQAGAAGIIVSNHGAR-QLDYV--PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~~gg~-~~~~~--~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.+.+..+...+.+-.+|.+-.+-|. ..... ....+.+.++++.. ++||++.+||++++++.++.. +||+|.+|+
T Consensus 152 t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~~-~ADGVIVGS 228 (252)
T 3tha_A 152 TPKERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMRK-VADGVIVGT 228 (252)
T ss_dssp SCHHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHTT-TSSEEEECH
T ss_pred CcHHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHHh-cCCEEEECH
Confidence 4467788887776666654332221 11111 11234556665543 799999999999999987765 799999999
Q ss_pred HHHHHhhccChH
Q 017718 308 PVVYSLAAEGEK 319 (367)
Q Consensus 308 ~~l~~l~~~G~~ 319 (367)
+++..+...+.+
T Consensus 229 AiVk~i~~~~~~ 240 (252)
T 3tha_A 229 SIVKCFKQGNLD 240 (252)
T ss_dssp HHHHHTTSSCHH
T ss_pred HHHHHHHhcCHH
Confidence 999876544443
No 126
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.96 E-value=9.9e-05 Score=69.01 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCHHHHHHHHHcCCcEEEE-cCCCCC--CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 231 LTAEDARIAVQAGAAGIIV-SNHGAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~v-s~~gg~--~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.+.+.++...+.+..++.+ +-.|-+ .........+.+.++++.. ++||++.|||++++++.++ .|||+|.+|+
T Consensus 155 s~~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 155 STDARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp CCHHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred CCHHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 4456556555555555544 322222 1112233456777777654 7999999999999999996 9999999999
Q ss_pred HHHHHh
Q 017718 308 PVVYSL 313 (367)
Q Consensus 308 ~~l~~l 313 (367)
++....
T Consensus 231 Ai~~~~ 236 (271)
T 1ujp_A 231 ALVRAL 236 (271)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 998764
No 127
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=97.88 E-value=3.2e-05 Score=70.89 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.++|+|.|.++.-.+. .......++.+.++++.+ ++||++.|||++.+++.+++.+|||+|.+|+..+-
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~-~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 109 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISAT-HEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVR 109 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSS-TTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCCcc-ccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 46688899999999998742211 112233556677776655 79999999999999999999999999999998763
No 128
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=97.87 E-value=3.5e-05 Score=70.68 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=58.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.++|+|.|.++.-.+.. ......++.+.++++.+ ++||++.|||++.+++.+++.+|||+|.+|+..+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHHh
Confidence 356888999999999987532211 12233456677776644 79999999999999999999999999999997754
No 129
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.87 E-value=0.0003 Score=64.82 Aligned_cols=111 Identities=19% Similarity=0.264 Sum_probs=73.8
Q ss_pred HHHHhhc-CCCEEEEec-CCH-HHHHHHHHcCCcEEEEcCCCC------------------------CC----------C
Q 017718 215 KWLQTIT-KLPILVKGV-LTA-EDARIAVQAGAAGIIVSNHGA------------------------RQ----------L 257 (367)
Q Consensus 215 ~~l~~~~-~~Pv~vK~v-~~~-~~a~~~~~~G~d~i~vs~~gg------------------------~~----------~ 257 (367)
+.+|+.+ ++|+-+..- .++ .-++.+.++|+|.|.+..... +. .
T Consensus 78 ~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~v 157 (246)
T 3inp_A 78 KALRDYGITAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNI 157 (246)
T ss_dssp HHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGC
T ss_pred HHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcC
Confidence 4788877 789888775 444 347778899999999953111 00 0
Q ss_pred --------C---Cc----cchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChH
Q 017718 258 --------D---YV----PATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEK 319 (367)
Q Consensus 258 --------~---~~----~~~~~~l~~i~~~~~---~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~ 319 (367)
+ +| +..++.++++++... .+++|.++|||. .+.+.++..+|||.+.+||+++-+ ..
T Consensus 158 D~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~aGAD~~V~GSaIf~a---~d-- 231 (246)
T 3inp_A 158 DRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAVCGVNAFVAGSAIFNS---DS-- 231 (246)
T ss_dssp SEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHTTTCCEEEESHHHHTS---SC--
T ss_pred CEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHHcCCCEEEEehHHhCC---CC--
Confidence 0 12 446666777665542 258999999998 578889999999999999976521 12
Q ss_pred HHHHHHHHHHHHH
Q 017718 320 GVRRVLEMLREEF 332 (367)
Q Consensus 320 ~v~~~i~~l~~el 332 (367)
..+.++.|++++
T Consensus 232 -p~~~i~~l~~~i 243 (246)
T 3inp_A 232 -YKQTIDKMRDEL 243 (246)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 224555665544
No 130
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.85 E-value=0.00041 Score=62.71 Aligned_cols=168 Identities=15% Similarity=0.110 Sum_probs=96.6
Q ss_pred HHHHHHHHHcCCcee-ecC----C---CCCCHHH---HHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecC-
Q 017718 91 YATARAASAAGTIMT-LSS----W---STSSVEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD- 158 (367)
Q Consensus 91 ~~~a~aa~~~G~~~~-vs~----~---~~~~~e~---i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd- 158 (367)
...++++.+.|+.++ +.. + .....+. +.+..+.+..+.+|.. |++ +.++.+.++|++.+.++.+
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn-d~~---~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIV-EPD---QRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEESS-SHH---HHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEEEEec-CHH---HHHHHHHHcCCCEEEEEecC
Confidence 467788888887643 321 1 1223343 3333334667777753 543 4677788899999987665
Q ss_pred -CCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEEec-CCHHHH
Q 017718 159 -TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVKGV-LTAEDA 236 (367)
Q Consensus 159 -~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK~v-~~~~~a 236 (367)
.+-. ..+ ..+.+++ .++.+++-.. .+..+.
T Consensus 102 ~~~~~-------------------------------------~~~----------~~~~~~~-~g~~ig~~~~p~t~~e~ 133 (230)
T 1rpx_A 102 SSTIH-------------------------------------LHR----------TINQIKS-LGAKAGVVLNPGTPLTA 133 (230)
T ss_dssp TTCSC-------------------------------------HHH----------HHHHHHH-TTSEEEEEECTTCCGGG
T ss_pred ccchh-------------------------------------HHH----------HHHHHHH-cCCcEEEEeCCCCCHHH
Confidence 2100 000 0113333 2444443332 223333
Q ss_pred HHHHHcCCcEEEEcCC--CCCCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 237 RIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 237 ~~~~~~G~d~i~vs~~--gg~~~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
......++|+|.+... |+......+...+.+.++++... .++|++++|||+ ++++.+++.+|||+|.+||++..
T Consensus 134 ~~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~aGad~vvvgSaI~~ 212 (230)
T 1rpx_A 134 IEYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIEAGANALVAGSAVFG 212 (230)
T ss_dssp GTTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred HHHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHHcCCCEEEEChhhhC
Confidence 3334468998855432 22212222344555666665442 268999999998 78898999999999999998863
No 131
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.85 E-value=0.00048 Score=63.97 Aligned_cols=66 Identities=33% Similarity=0.548 Sum_probs=53.9
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC--CHHHHHHHH----HcCCCEEEechHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR--RGTDVFKAL----ALGASGIFIGRPV 309 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~--~~~dv~kal----~lGAd~V~ig~~~ 309 (367)
++.+.++|+|+|.++- . ...+.+.++++.+ ..+||+++|||+ +.+|+++.+ ..||+++.+||.+
T Consensus 165 ~~~a~~~GAD~vkt~~-~--------~~~e~~~~~~~~~-~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 165 ARIALELGADAMKIKY-T--------GDPKTFSWAVKVA-GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHTCSEEEEEC-C--------SSHHHHHHHHHHT-TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHcCCCEEEEcC-C--------CCHHHHHHHHHhC-CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 5778999999999962 1 2457778887776 345999999999 889988877 7999999999988
Q ss_pred HH
Q 017718 310 VY 311 (367)
Q Consensus 310 l~ 311 (367)
+.
T Consensus 235 ~~ 236 (263)
T 1w8s_A 235 WQ 236 (263)
T ss_dssp HT
T ss_pred cC
Confidence 75
No 132
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=97.84 E-value=6.1e-05 Score=68.43 Aligned_cols=76 Identities=26% Similarity=0.308 Sum_probs=60.5
Q ss_pred CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 232 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 232 ~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
..+.++.+.++|+|+|.++...+.. .......+.+.++++.+ ++||++.|||.+.+++.+++.+|||+|.++++.+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~~~ 110 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNTAAV 110 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 3577899999999999997532211 12234566778887766 7999999999999999999999999999999875
No 133
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.80 E-value=0.00017 Score=64.56 Aligned_cols=168 Identities=13% Similarity=0.124 Sum_probs=94.0
Q ss_pred HHHHHHHHHcCCcee---e--cCC-CCCC--HHH---HHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCC
Q 017718 91 YATARAASAAGTIMT---L--SSW-STSS--VEE---VASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT 159 (367)
Q Consensus 91 ~~~a~aa~~~G~~~~---v--s~~-~~~~--~e~---i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~ 159 (367)
...++.+.+.|+.+. + +++ ...+ .+. +.+..+.+..+-++. .|++. .++.+.++|++.+.++...
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v-~d~~~---~i~~~~~~gad~v~vh~~~ 94 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMV-VDPER---YVEAFAQAGADIMTIHTES 94 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEES-SSGGG---GHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEee-cCHHH---HHHHHHHcCCCEEEEccCc
Confidence 467788888887542 2 331 1112 443 333333355556664 34432 3477788999998886642
Q ss_pred CCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEEec-CCHHHHHH
Q 017718 160 PRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVKGV-LTAEDARI 238 (367)
Q Consensus 160 p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK~v-~~~~~a~~ 238 (367)
+-. .....+.+++ .+.++++-.. .+..+...
T Consensus 95 ~~~-----------------------------------------------~~~~~~~~~~-~g~~i~~~~~~~t~~e~~~ 126 (220)
T 2fli_A 95 TRH-----------------------------------------------IHGALQKIKA-AGMKAGVVINPGTPATALE 126 (220)
T ss_dssp CSC-----------------------------------------------HHHHHHHHHH-TTSEEEEEECTTSCGGGGG
T ss_pred ccc-----------------------------------------------HHHHHHHHHH-cCCcEEEEEcCCCCHHHHH
Confidence 100 0000113433 2444433321 23333333
Q ss_pred HHHcCCcEEEEcC-C-CCCCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 239 AVQAGAAGIIVSN-H-GARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 239 ~~~~G~d~i~vs~-~-gg~~~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
....++|+|.+.. + |+......+...+.+.++++... .++|++++|||+ .+++.+++.+|||+|.+||++..
T Consensus 127 ~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~~Gad~vvvGsai~~ 203 (220)
T 2fli_A 127 PLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYEAGANVFVAGSYLFK 203 (220)
T ss_dssp GGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHHHTCCEEEESHHHHT
T ss_pred HHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHHcCCCEEEEChHHhC
Confidence 3446799886632 2 22222223444555655655442 268999999999 79999998999999999999864
No 134
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.79 E-value=0.00014 Score=66.14 Aligned_cols=85 Identities=18% Similarity=0.231 Sum_probs=64.4
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
..++ .+.|+++ ++.+++++..+.+.|+|+|.+.. .. . ..-.+.|++++..++ ++|+++.||| +.+++...
T Consensus 105 ~ar~-~g~~~i~-Gv~t~~e~~~A~~~Gad~vk~Fp--a~-~---~gG~~~lk~l~~~~~-~ipvvaiGGI-~~~N~~~~ 174 (224)
T 1vhc_A 105 LCQD-LNFPITP-GVNNPMAIEIALEMGISAVKFFP--AE-A---SGGVKMIKALLGPYA-QLQIMPTGGI-GLHNIRDY 174 (224)
T ss_dssp HHHH-TTCCEEC-EECSHHHHHHHHHTTCCEEEETT--TT-T---TTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHHH
T ss_pred HHHH-hCCCEEe-ccCCHHHHHHHHHCCCCEEEEee--Cc-c---ccCHHHHHHHHhhCC-CCeEEEECCc-CHHHHHHH
Confidence 4444 7888877 58899999999999999999932 10 0 112566777765553 6999999999 45789999
Q ss_pred HHc-CCCEEEechHHHH
Q 017718 296 LAL-GASGIFIGRPVVY 311 (367)
Q Consensus 296 l~l-GAd~V~ig~~~l~ 311 (367)
+.+ |+++|. |+.+.-
T Consensus 175 l~agga~~v~-gS~i~~ 190 (224)
T 1vhc_A 175 LAIPNIVACG-GSWFVE 190 (224)
T ss_dssp HTSTTBCCEE-ECGGGC
T ss_pred HhcCCCEEEE-EchhcC
Confidence 998 999999 886653
No 135
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.76 E-value=0.00024 Score=64.06 Aligned_cols=85 Identities=19% Similarity=0.221 Sum_probs=64.6
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
..++..+.|++. ++.+++++..+.++|+|+|.+.. .. . ..-.+.|.+++..++ ++|+++.|||. .+++...
T Consensus 103 ~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~v~~Fp--a~-~---~gG~~~lk~i~~~~~-~ipvvaiGGI~-~~n~~~~ 173 (214)
T 1wbh_A 103 KAATEGTIPLIP-GISTVSELMLGMDYGLKEFKFFP--AE-A---NGGVKALQAIAGPFS-QVRFCPTGGIS-PANYRDY 173 (214)
T ss_dssp HHHHHSSSCEEE-EESSHHHHHHHHHTTCCEEEETT--TT-T---TTHHHHHHHHHTTCT-TCEEEEBSSCC-TTTHHHH
T ss_pred HHHHHhCCCEEE-ecCCHHHHHHHHHCCCCEEEEec--Cc-c---ccCHHHHHHHhhhCC-CCeEEEECCCC-HHHHHHH
Confidence 444557888877 58999999999999999999932 11 1 112566777765443 79999999994 5889999
Q ss_pred HHc-CCCEEEechHHH
Q 017718 296 LAL-GASGIFIGRPVV 310 (367)
Q Consensus 296 l~l-GAd~V~ig~~~l 310 (367)
+.+ |+++|. |+.+.
T Consensus 174 l~agg~~~v~-gS~i~ 188 (214)
T 1wbh_A 174 LALKSVLCIG-GSWLV 188 (214)
T ss_dssp HTSTTBSCEE-EGGGS
T ss_pred HhcCCCeEEE-ecccc
Confidence 998 899999 88665
No 136
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=97.70 E-value=0.00018 Score=65.41 Aligned_cols=75 Identities=25% Similarity=0.268 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.++|+|.|.+..-.+. ....+.. +.+.++++.+ ++|+++.|||++++++.+++.+|||.|.+|+..+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~~~d~~-~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 34 VDAALGWQRDGAEWIHLVDLDAA-FGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALATGCARVNVGTAALE 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHH-TTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEcCccc-ccCCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHcCCCEEEECchHhh
Confidence 46788999999999999642111 1223344 7888888776 79999999999999999999999999999997653
No 137
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.69 E-value=0.00066 Score=64.12 Aligned_cols=79 Identities=25% Similarity=0.397 Sum_probs=55.7
Q ss_pred hcCCCEEEEe------cCCHH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 220 ITKLPILVKG------VLTAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 220 ~~~~Pv~vK~------v~~~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
.+++|+++=. ..+.+ .++.+.++|+|+|.++-.+ +.+.++.+.. ++||++.||+...
T Consensus 169 ~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t~-----------e~~~~vv~~~--~vPVv~~GG~~~~ 235 (295)
T 3glc_A 169 KVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYVE-----------KGFERIVAGC--PVPIVIAGGKKLP 235 (295)
T ss_dssp TTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEECCT-----------TTHHHHHHTC--SSCEEEECCSCCC
T ss_pred HcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCCH-----------HHHHHHHHhC--CCcEEEEECCCCC
Confidence 3578887611 12332 4788999999999986221 2356666544 7999999999853
Q ss_pred -H----HHHHHHHcCCCEEEechHHHH
Q 017718 290 -T----DVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 290 -~----dv~kal~lGAd~V~ig~~~l~ 311 (367)
+ .+.+++.+||+++.+||.++.
T Consensus 236 ~~~~l~~v~~ai~aGA~Gv~vGRnI~q 262 (295)
T 3glc_A 236 EREALEMCWQAIDQGASGVDMGRNIFQ 262 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHHHHHHhCCeEEEeHHHHhc
Confidence 3 355666899999999998875
No 138
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.69 E-value=0.00012 Score=68.34 Aligned_cols=69 Identities=17% Similarity=0.161 Sum_probs=56.4
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+..+.+.|...+.+...+ .+...+.+.++++.+...+||++-|||++.+|+.+++.+|||.|.+|+.++
T Consensus 192 a~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGSAav 260 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGFAGALE 260 (286)
T ss_dssp HHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEESGGGS
T ss_pred HHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECchhh
Confidence 455567788888887422 345678888888876436999999999999999999999999999999775
No 139
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.66 E-value=0.00023 Score=64.14 Aligned_cols=164 Identities=20% Similarity=0.086 Sum_probs=102.6
Q ss_pred CChhhHHHHHHHHHcCCceeecCCCCC----CHHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCC
Q 017718 86 HPEGEYATARAASAAGTIMTLSSWSTS----SVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR 161 (367)
Q Consensus 86 ~~~~e~~~a~aa~~~G~~~~vs~~~~~----~~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~ 161 (367)
+++.-..+++++.+.|+..+-=++.+. .++.+.+..|.. .+=.- -=.+.+.++++.++|++.++. |.
T Consensus 23 ~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~-~IGAG----TVlt~~~a~~ai~AGA~fivs----P~ 93 (217)
T 3lab_A 23 DLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEA-IVGAG----TVCTADDFQKAIDAGAQFIVS----PG 93 (217)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTS-EEEEE----CCCSHHHHHHHHHHTCSEEEE----SS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCC-eEeec----cccCHHHHHHHHHcCCCEEEe----CC
Confidence 344456899999999999764344332 234455555532 11111 111345678888999998863 22
Q ss_pred CCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEEecCCHHHHHHHHH
Q 017718 162 LGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVKGVLTAEDARIAVQ 241 (367)
Q Consensus 162 ~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK~v~~~~~a~~~~~ 241 (367)
. +. ...++... ..+...|..|++- ++.++.++..+.+
T Consensus 94 ~-----------------~~-----------------evi~~~~~--------~~v~~~~~~~~~P-G~~TptE~~~A~~ 130 (217)
T 3lab_A 94 L-----------------TP-----------------ELIEKAKQ--------VKLDGQWQGVFLP-GVATASEVMIAAQ 130 (217)
T ss_dssp C-----------------CH-----------------HHHHHHHH--------HHHHCSCCCEEEE-EECSHHHHHHHHH
T ss_pred C-----------------cH-----------------HHHHHHHH--------cCCCccCCCeEeC-CCCCHHHHHHHHH
Confidence 1 00 00000000 0222235558765 8899999999999
Q ss_pred cCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHH
Q 017718 242 AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 242 ~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
+|+|.|-++-.. ..+| .+.|+.++..+ .++|+++.|||. .+++..++++||.++..|+.+
T Consensus 131 ~Gad~vK~FPa~---~~gG---~~~lkal~~p~-p~i~~~ptGGI~-~~N~~~~l~aGa~~~vgGs~l 190 (217)
T 3lab_A 131 AGITQLKCFPAS---AIGG---AKLLKAWSGPF-PDIQFCPTGGIS-KDNYKEYLGLPNVICAGGSWL 190 (217)
T ss_dssp TTCCEEEETTTT---TTTH---HHHHHHHHTTC-TTCEEEEBSSCC-TTTHHHHHHSTTBCCEEESGG
T ss_pred cCCCEEEECccc---cccC---HHHHHHHHhhh-cCceEEEeCCCC-HHHHHHHHHCCCEEEEEChhh
Confidence 999999985311 1112 45666665544 379999999998 789999999999988777644
No 140
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=97.66 E-value=3.8e-05 Score=70.13 Aligned_cols=75 Identities=17% Similarity=0.140 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+.++|+|.|.++...+.. ......++.+.+++ .. .+||++.|||++.+++.+++.+|||+|++|+..+-
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~l~ 107 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAI-ENSGENLPVLEKLS-EF--AEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSKVLE 107 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHH-HCCCTTHHHHHHGG-GG--GGGEEEESSCCSHHHHHHHHHTTCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccccc-cCCchhHHHHHHHH-hc--CCcEEEECCCCCHHHHHHHHHCCCCEEEECchHhh
Confidence 467899999999999996521100 01234577777776 44 79999999999999999999999999999998763
No 141
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=97.63 E-value=0.0026 Score=57.44 Aligned_cols=181 Identities=13% Similarity=0.141 Sum_probs=116.8
Q ss_pred hhHHHHHHHHHcCCceeecCCC---------CCCHH----HHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEE
Q 017718 89 GEYATARAASAAGTIMTLSSWS---------TSSVE----EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIAL 155 (367)
Q Consensus 89 ~e~~~a~aa~~~G~~~~vs~~~---------~~~~e----~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~i 155 (367)
.|+.-.+.+.+.|+.-.++|.. ....+ ++++..+++..+|+. ..|.+.+.+..++..+.+ +-++|
T Consensus 8 An~~ei~~~~~~g~i~GVTTNPsli~k~~~~g~~~~~~~~ei~~~v~G~Vs~EV~-a~d~e~mi~eA~~L~~~~-~nv~I 85 (223)
T 3s1x_A 8 ANIDEIRTGVNWGIVDGVTTNPTLISKEAVNGKKYGDIIREILKIVDGPVSVEVV-STKYEGMVEEARKIHGLG-DNAVV 85 (223)
T ss_dssp CCHHHHHHHHHHTCCCEEECCHHHHHHHSCTTCCHHHHHHHHHHHCSSCEEEECC-CCSHHHHHHHHHHHHHTC-TTEEE
T ss_pred CCHHHHHHHHhcCCcccccCCHHHHHhhhccCCCHHHHHHHHHHhCCCCEEEEEc-cCCHHHHHHHHHHHHHhC-CCEEE
Confidence 4677778888888877776542 23333 344555677888887 456665555555554543 22333
Q ss_pred ecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH------HHHhhcCCCEEEEe
Q 017718 156 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK------WLQTITKLPILVKG 229 (367)
Q Consensus 156 tvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~l~~~~~~Pv~vK~ 229 (367)
-+- .+|+ .|.+ -++++-+-.
T Consensus 86 KIP-----------------------------------------------------~T~eGl~A~~~L~~-~GI~vn~Tl 111 (223)
T 3s1x_A 86 KIP-----------------------------------------------------MTEDGLRAIKTLSS-EHINTNCTL 111 (223)
T ss_dssp EEE-----------------------------------------------------SSHHHHHHHHHHHH-TTCCEEEEE
T ss_pred EeC-----------------------------------------------------CCHHHHHHHHHHHH-CCCcEEEEE
Confidence 211 0222 3333 389999999
Q ss_pred cCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 230 VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 230 v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
+.+...|..|.++|+++|... =||-.|++.+..+.+.++.+.. +.+..|++.+ +|+..++.++..+|||.+-+.
T Consensus 112 ifS~~QA~~Aa~AGa~yISPf--vgRi~d~g~dG~~~v~~i~~~~~~~~~~T~IlaAS-~Rn~~~v~~aa~~G~d~~Tip 188 (223)
T 3s1x_A 112 VFNPIQALLAAKAGVTYVSPF--VGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILVAS-IRNPIHVLRSAVIGADVVTVP 188 (223)
T ss_dssp ECSHHHHHHHHHTTCSEEEEB--SHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEEBS-CCSHHHHHHHHHHTCSEEEEC
T ss_pred eCCHHHHHHHHHcCCeEEEee--cchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEEEe-CCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999988763 3443344444455555555433 3356666655 999999999999999999999
Q ss_pred hHHHHHhhccC--hHHHHHHHHHH
Q 017718 307 RPVVYSLAAEG--EKGVRRVLEML 328 (367)
Q Consensus 307 ~~~l~~l~~~G--~~~v~~~i~~l 328 (367)
-.++..+..+- ..|++.+.+.|
T Consensus 189 ~~vl~~l~~hpltd~~~~~F~~Dw 212 (223)
T 3s1x_A 189 FNVLKSLMKHPKTDEGLAKFLEDW 212 (223)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHH
Confidence 88887665322 24555555554
No 142
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.63 E-value=0.0015 Score=59.38 Aligned_cols=90 Identities=24% Similarity=0.206 Sum_probs=59.3
Q ss_pred HHHHhhcCCCEEEEec-----CCHHH----HHHHHHcCCcEEEEcCCCCC-------CCCCccch---HHHHHHHHHHhc
Q 017718 215 KWLQTITKLPILVKGV-----LTAED----ARIAVQAGAAGIIVSNHGAR-------QLDYVPAT---IMALEEVVKATQ 275 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-----~~~~~----a~~~~~~G~d~i~vs~~gg~-------~~~~~~~~---~~~l~~i~~~~~ 275 (367)
..+++..+- ..+|.+ ++.+. ++.+.++|+|+|-.|. |-. ..+.+..+ .+.+++..+.++
T Consensus 105 ~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTST-Gf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 105 ISVVGAAGG-RVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSST-GFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp HHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCC-SCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC-CCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCC-CCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 355555432 256643 34433 6778999999999873 211 01122233 444455444477
Q ss_pred CCCcEEEecCCCCHHHHHHHHHc---CCC----EEEec
Q 017718 276 GRIPVFLDGGVRRGTDVFKALAL---GAS----GIFIG 306 (367)
Q Consensus 276 ~~~~via~GGI~~~~dv~kal~l---GAd----~V~ig 306 (367)
.+++|-++|||++.+|+++++.+ ||+ -++..
T Consensus 183 ~~v~vKaaGGirt~~~al~~i~a~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 183 YRLGVKMAGGIRTREQAKAIVDAIGWGEDPARVRLGTS 220 (226)
T ss_dssp CCCEEEEESSCCSHHHHHHHHHHHCSCSCTTTEEEEES
T ss_pred CCceEEEeCCCCCHHHHHHHHHHHHCCCCcCCceEecC
Confidence 78999999999999999999999 999 66544
No 143
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.62 E-value=0.00036 Score=66.01 Aligned_cols=84 Identities=21% Similarity=0.205 Sum_probs=66.4
Q ss_pred HHHHHhhcCC-CEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 214 WKWLQTITKL-PILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 214 ~~~l~~~~~~-Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
++.+++..+- ++++ .+-+.++++.+.++|+|+|.++| .+.+.+.++++.++++++|.++||| +.+.+
T Consensus 199 i~~~r~~~~~~kI~v-ev~tlee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~ASGGI-t~~~i 266 (296)
T 1qap_A 199 VEKAFWLHPDVPVEV-EVENLDELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEVSGNV-TAETL 266 (296)
T ss_dssp HHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEECCCS-CHHHH
T ss_pred HHHHHHhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEECCC-CHHHH
Confidence 3355555532 5555 56788999999999999999976 3446666776666668999999999 99999
Q ss_pred HHHHHcCCCEEEechHH
Q 017718 293 FKALALGASGIFIGRPV 309 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~~ 309 (367)
.+....|+|.+.+|+..
T Consensus 267 ~~~a~~GvD~isvGsli 283 (296)
T 1qap_A 267 REFAETGVDFISVGALT 283 (296)
T ss_dssp HHHHHTTCSEEECSHHH
T ss_pred HHHHHcCCCEEEEeHHH
Confidence 99999999999999843
No 144
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=97.61 E-value=0.00012 Score=66.70 Aligned_cols=74 Identities=26% Similarity=0.308 Sum_probs=59.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.++.+.++|+|.|.+..-.+. ..+.... +.+.++++.. ++|+++.|||++++++.+++.+|||.|.+|+..+
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~-~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~l 108 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAA-FGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALATGCTRVNLGTAAL 108 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHH-HTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCchh-hcCCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHHcCCCEEEECchHh
Confidence 46688899999999998642111 1122345 7788888776 7999999999999999999999999999999765
No 145
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.59 E-value=8.7e-05 Score=68.56 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=59.1
Q ss_pred CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 232 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 232 ~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
..+.++.+.++|++.|.++.-.+... .....++.+.++++.+ ++||++.|||++.+|+.+++.+|||+|.+|+.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKALAASVFH 107 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC-
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHH
Confidence 35678899999999999965221111 1124577788877655 7999999999999999999999999999999776
No 146
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.59 E-value=0.00079 Score=59.63 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=50.2
Q ss_pred CHHH-HHHHHHcCCcEEEEcCCCCCCCCCccchH-HHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHH
Q 017718 232 TAED-ARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 232 ~~~~-a~~~~~~G~d~i~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
++++ ++.+.+.|+|.+.+.- +......+.... +.++++... ++|+++.|||+ .+++.+++..|||+|.+||++
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~-~~~~~~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHA-GLDEQAKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEEC-CHHHHTSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHHTTCSEEEESHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEe-cccccccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHHcCCCEEEEeeec
Confidence 5554 6777788999984431 100001111111 445554432 68999999998 788889999999999999998
Q ss_pred HH
Q 017718 310 VY 311 (367)
Q Consensus 310 l~ 311 (367)
+.
T Consensus 190 ~~ 191 (207)
T 3ajx_A 190 YG 191 (207)
T ss_dssp HT
T ss_pred cC
Confidence 64
No 147
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.59 E-value=0.00022 Score=64.77 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=63.9
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
..++..++|+++ ++.+++++..+.++|+|+|-+. . .... -.+.|.+++..++ ++|+++.||| +.+++..
T Consensus 113 ~~~~~~g~~~i~-G~~t~~e~~~A~~~Gad~vk~F--P-----a~~~~G~~~lk~i~~~~~-~ipvvaiGGI-~~~N~~~ 182 (225)
T 1mxs_A 113 EAGVDSEIPLLP-GISTPSEIMMGYALGYRRFKLF--P-----AEISGGVAAIKAFGGPFG-DIRFCPTGGV-NPANVRN 182 (225)
T ss_dssp HHHHHCSSCEEC-EECSHHHHHHHHTTTCCEEEET--T-----HHHHTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHH
T ss_pred HHHHHhCCCEEE-eeCCHHHHHHHHHCCCCEEEEc--c-----CccccCHHHHHHHHhhCC-CCeEEEECCC-CHHHHHH
Confidence 444557888876 5899999999999999999983 2 1111 2456666665443 7999999999 5678999
Q ss_pred HHH-cCCCEEEechHHH
Q 017718 295 ALA-LGASGIFIGRPVV 310 (367)
Q Consensus 295 al~-lGAd~V~ig~~~l 310 (367)
.+. .||++|. |+.++
T Consensus 183 ~l~~~Ga~~v~-gSai~ 198 (225)
T 1mxs_A 183 YMALPNVMCVG-TTWML 198 (225)
T ss_dssp HHHSTTBCCEE-ECTTS
T ss_pred HHhccCCEEEE-Echhc
Confidence 999 6999999 88665
No 148
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.58 E-value=0.00034 Score=63.63 Aligned_cols=167 Identities=15% Similarity=0.150 Sum_probs=97.3
Q ss_pred HHHHHHHHcCCcee-ecCCC-----C--CC---HHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecC--
Q 017718 92 ATARAASAAGTIMT-LSSWS-----T--SS---VEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD-- 158 (367)
Q Consensus 92 ~~a~aa~~~G~~~~-vs~~~-----~--~~---~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd-- 158 (367)
...+.+.+.|+.+. +..+. + .. .+++++....+.-..|.. .|++. .++.+.++|++.+.++..
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv-~dp~~---~i~~~~~aGadgv~vh~e~~ 96 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMI-VEPEK---YVEDFAKAGADIISVHVEHN 96 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEES-SSGGG---THHHHHHHTCSEEEEECSTT
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEEc-cCHHH---HHHHHHHcCCCEEEECcccc
Confidence 56677778887653 32221 1 12 233443332355555664 56643 567888899999988754
Q ss_pred CCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEEec-CCHHHHH
Q 017718 159 TPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVKGV-LTAEDAR 237 (367)
Q Consensus 159 ~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK~v-~~~~~a~ 237 (367)
.+-. ..+ ..+.+++ .++.+.+-.. .++.+..
T Consensus 97 ~~~~-------------------------------------~~~----------~~~~i~~-~g~~~gv~~~p~t~~e~~ 128 (230)
T 1tqj_A 97 ASPH-------------------------------------LHR----------TLCQIRE-LGKKAGAVLNPSTPLDFL 128 (230)
T ss_dssp TCTT-------------------------------------HHH----------HHHHHHH-TTCEEEEEECTTCCGGGG
T ss_pred cchh-------------------------------------HHH----------HHHHHHH-cCCcEEEEEeCCCcHHHH
Confidence 2100 000 1113333 3444444332 2333334
Q ss_pred HHHHcCCcEEEEcC-CCCCC-CCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 238 IAVQAGAAGIIVSN-HGARQ-LDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 238 ~~~~~G~d~i~vs~-~gg~~-~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.....++|+|.+.. ++|.. ....+...+.|.++++... .++||.++|||.. +++.++..+|||.+.+||+++.
T Consensus 129 ~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~aGad~vvvGSai~~ 206 (230)
T 1tqj_A 129 EYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLEAGANAIVAGSAVFN 206 (230)
T ss_dssp TTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHHHTCCEEEESHHHHT
T ss_pred HHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHHcCCCEEEECHHHHC
Confidence 44445899886532 33321 2234556777777776552 2699999999998 8899999999999999998763
No 149
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.58 E-value=0.00048 Score=62.62 Aligned_cols=81 Identities=14% Similarity=0.159 Sum_probs=59.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhc
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~ 315 (367)
|..+.-.|...|.+.. .|.. ...+.+.++++.+. ++||++-|||++++++.+++ .|||.|.+|+++..
T Consensus 146 a~~a~~~g~~~VYld~-sG~~-----~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGSa~v~---- 213 (228)
T 3vzx_A 146 ARVSELLQLPIFYLEY-SGVL-----GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA-EHADVIVVGNAVYE---- 213 (228)
T ss_dssp HHHHHHTTCSEEEEEC-TTSC-----CCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH-TTCSEEEECTHHHH----
T ss_pred HHHHHHcCCCEEEecC-CCCc-----CCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH-hCCCEEEEChHHhc----
Confidence 3444456788888876 3321 25788888887652 58999999999999999987 79999999998875
Q ss_pred cChHHHHHHHHHHH
Q 017718 316 EGEKGVRRVLEMLR 329 (367)
Q Consensus 316 ~G~~~v~~~i~~l~ 329 (367)
.++-+.++++.++
T Consensus 214 -~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 214 -DFDRALKTVAAVK 226 (228)
T ss_dssp -CHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHh
Confidence 3444444444443
No 150
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.57 E-value=0.00019 Score=69.08 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=87.8
Q ss_pred cCCceeecCCCCCCHHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcc
Q 017718 100 AGTIMTLSSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFL 179 (367)
Q Consensus 100 ~G~~~~vs~~~~~~~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~ 179 (367)
...|+++++|+..+.++++....+..|+|+|...+++.+.++++++++.|+. +++|. |.++
T Consensus 45 l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~~~~~i~~~~~~g~~---v~v~~---g~~~------------- 105 (336)
T 1ypf_A 45 FKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLI---ASISV---GVKE------------- 105 (336)
T ss_dssp ESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCC---CEEEE---CCSH-------------
T ss_pred ecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHHHHHHHHHHHhcCCe---EEEeC---CCCH-------------
Confidence 3467889999888888886532245789999888888888888888776531 11110 0000
Q ss_pred ccccccccccCccccccchhhHHHhhhccCccccHHHHHhhcCCCEEEEecCCHHHHHHHHHcC--CcEEEEcCCCCCCC
Q 017718 180 TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTITKLPILVKGVLTAEDARIAVQAG--AAGIIVSNHGARQL 257 (367)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~Pv~vK~v~~~~~a~~~~~~G--~d~i~vs~~gg~~~ 257 (367)
+. .+.++.+.++| ++.|.+....|
T Consensus 106 -----------------------------------~~----------------~~~a~~~~~~g~~~~~i~i~~~~G--- 131 (336)
T 1ypf_A 106 -----------------------------------DE----------------YEFVQQLAAEHLTPEYITIDIAHG--- 131 (336)
T ss_dssp -----------------------------------HH----------------HHHHHHHHHTTCCCSEEEEECSSC---
T ss_pred -----------------------------------HH----------------HHHHHHHHhcCCCCCEEEEECCCC---
Confidence 00 02356677888 88887632111
Q ss_pred CCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 258 DYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 258 ~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.....++.+.++++.. ..+++..|.|.+.+++.++..+|||+|.++
T Consensus 132 -~~~~~~~~i~~lr~~~--~~~~vi~G~v~s~e~A~~a~~aGad~Ivvs 177 (336)
T 1ypf_A 132 -HSNAVINMIQHIKKHL--PESFVIAGNVGTPEAVRELENAGADATKVG 177 (336)
T ss_dssp -CSHHHHHHHHHHHHHC--TTSEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred -CcHHHHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEEe
Confidence 1234677888888776 334455577999999999999999999993
No 151
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.57 E-value=0.0015 Score=59.61 Aligned_cols=65 Identities=25% Similarity=0.257 Sum_probs=47.8
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCC-ccchHHHHHH--HHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDY-VPATIMALEE--VVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~-~~~~~~~l~~--i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
++.+.++|+|+|-.|. | +.+ +..+.+.+.. +++.++ +||-++|||++.+|+++++.+||+-++..
T Consensus 154 ~ria~eaGADfVKTsT-G---~~~~~gAt~~dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i~aGa~RiG~S 221 (234)
T 1n7k_A 154 VDSSRRAGADIVKTST-G---VYTKGGDPVTVFRLASLAKPLG--MGVKASGGIRSGIDAVLAVGAGADIIGTS 221 (234)
T ss_dssp HHHHHHTTCSEEESCC-S---SSCCCCSHHHHHHHHHHHGGGT--CEEEEESSCCSHHHHHHHHHTTCSEEEET
T ss_pred HHHHHHhCCCEEEeCC-C---CCCCCCCCHHHHHHHHHHHHHC--CCEEEecCCCCHHHHHHHHHcCccccchH
Confidence 6778999999999873 2 111 2345444444 555554 99999999999999999999999954433
No 152
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=97.56 E-value=0.012 Score=52.84 Aligned_cols=181 Identities=17% Similarity=0.148 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHcCCceeecCC------C-CCCHH----HHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEec
Q 017718 89 GEYATARAASAAGTIMTLSSW------S-TSSVE----EVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV 157 (367)
Q Consensus 89 ~e~~~a~aa~~~G~~~~vs~~------~-~~~~e----~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itv 157 (367)
.|+.-.+.+.+.|..-.++|. + ....+ +|++..+++..+|+. ..|.+.+.+..++..+.+ +.++|-+
T Consensus 8 An~~ei~~~~~~g~i~GVTTNPsli~k~~g~~~~~~~~eI~~~v~G~Vs~EV~-a~d~e~mi~ea~~l~~~~-~nv~IKI 85 (212)
T 3r8r_A 8 ANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI-SLKAEEMIEEGKELAKIA-PNITVKI 85 (212)
T ss_dssp CCHHHHHHHHHTTCEEEEECCHHHHHTSCSSCHHHHHHHHHHHCCSCEEEECC-CSSHHHHHHHHHHHHTTC-TTEEEEE
T ss_pred CCHHHHHHHHhcCCcccccCCHHHHHHccCCCHHHHHHHHHHhcCCCEEEEEe-cCCHHHHHHHHHHHHHhC-CCEEEEe
Confidence 477888889999988888765 2 23333 345555678888985 566665544444444443 2222211
Q ss_pred CCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH------HHHhhcCCCEEEEecC
Q 017718 158 DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK------WLQTITKLPILVKGVL 231 (367)
Q Consensus 158 d~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~l~~~~~~Pv~vK~v~ 231 (367)
| .+|+ .|.+ -++++-+-.+.
T Consensus 86 ------------------P-----------------------------------~T~eGl~A~~~L~~-~GI~vn~Tlif 111 (212)
T 3r8r_A 86 ------------------P-----------------------------------MTSDGLKAVRALTD-LGIKTNVTLIF 111 (212)
T ss_dssp ------------------E-----------------------------------SSHHHHHHHHHHHH-TTCCEEEEEEC
T ss_pred ------------------C-----------------------------------CCHHHHHHHHHHHH-CCCcEEEEEeC
Confidence 1 0222 3332 48999999999
Q ss_pred CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh---cCCCcEEEecCCCCHHHHHHHHHcCCCEEEechH
Q 017718 232 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT---QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 232 ~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~---~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~ 308 (367)
+...|..|.++|+++|.. .=||-.|++.+....+.++.+.. +.+..|++.+ +|+..++.++..+|||.+-+.-.
T Consensus 112 S~~Qa~~Aa~AGa~yISP--fvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ilaAS-~R~~~~v~~~a~~G~d~~Tip~~ 188 (212)
T 3r8r_A 112 NANQALLAARAGATYVSP--FLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAAS-IRHPQHVTEAALRGAHIGTMPLK 188 (212)
T ss_dssp SHHHHHHHHHHTCSEEEE--BHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEEBS-CCSHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHcCCeEEEe--ccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEEec-CCCHHHHHHHHHcCCCEEEcCHH
Confidence 999999999999998876 23443344555556665555443 3356666655 99999999999999999999988
Q ss_pred HHHHhhccC--hHHHHHHHHHH
Q 017718 309 VVYSLAAEG--EKGVRRVLEML 328 (367)
Q Consensus 309 ~l~~l~~~G--~~~v~~~i~~l 328 (367)
++..+..+- ..|++.+.+.|
T Consensus 189 vl~~l~~hpltd~~~~~F~~Dw 210 (212)
T 3r8r_A 189 VIHALTKHPLTDKGIEQFLADW 210 (212)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcHHHHHHHHHHHh
Confidence 887665322 23455554443
No 153
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.56 E-value=0.00014 Score=65.17 Aligned_cols=82 Identities=16% Similarity=0.091 Sum_probs=59.5
Q ss_pred EecCCHHHHHHHHHcCCcEEEEcCCCCCC-C-C-CccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEE
Q 017718 228 KGVLTAEDARIAVQAGAAGIIVSNHGARQ-L-D-YVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIF 304 (367)
Q Consensus 228 K~v~~~~~a~~~~~~G~d~i~vs~~gg~~-~-~-~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ 304 (367)
-.+.+.+++..+. .|+|+|.++.--.+. . + +.+..++.+.++.+.+..++||++.|||. ++++.+++.+||++|.
T Consensus 93 ~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~~~Ga~gVa 170 (210)
T 3ceu_A 93 CSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIKDFGFGGAV 170 (210)
T ss_dssp EEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHHHTTCSEEE
T ss_pred EecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHHHhCCCEEE
Confidence 3457889998888 999999985411110 1 1 12335677777765421279999999998 8999999999999999
Q ss_pred echHHHH
Q 017718 305 IGRPVVY 311 (367)
Q Consensus 305 ig~~~l~ 311 (367)
+++.+.-
T Consensus 171 v~s~i~~ 177 (210)
T 3ceu_A 171 VLGDLWN 177 (210)
T ss_dssp ESHHHHT
T ss_pred EhHHhHc
Confidence 9998863
No 154
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.54 E-value=0.0015 Score=58.85 Aligned_cols=117 Identities=19% Similarity=0.203 Sum_probs=85.7
Q ss_pred EEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhh
Q 017718 126 FFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (367)
Q Consensus 126 ~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (367)
.+-+....+.+...++++.+.+.|++.+-+|+++|.. .+
T Consensus 15 vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a--------------------------------------~~--- 53 (217)
T 3lab_A 15 LIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAG--------------------------------------LA--- 53 (217)
T ss_dssp EEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTH--------------------------------------HH---
T ss_pred EEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccH--------------------------------------HH---
Confidence 4445557788888899999999999999998886531 00
Q ss_pred hccCccccHHHHHhhcCCC-EEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCC------
Q 017718 206 GQIDRSLSWKWLQTITKLP-ILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI------ 278 (367)
Q Consensus 206 ~~~d~~~~~~~l~~~~~~P-v~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~------ 278 (367)
.++.+++.++.+ |....+.+.++++.+.++|+++|+.-+ .+.+++..+.+. .+
T Consensus 54 -------~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP~----------~~~evi~~~~~~---~v~~~~~~ 113 (217)
T 3lab_A 54 -------AISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSPG----------LTPELIEKAKQV---KLDGQWQG 113 (217)
T ss_dssp -------HHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEESS----------CCHHHHHHHHHH---HHHCSCCC
T ss_pred -------HHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeCC----------CcHHHHHHHHHc---CCCccCCC
Confidence 233666666544 444456899999999999999986522 134455444432 45
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEe
Q 017718 279 PVFLDGGVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lGAd~V~i 305 (367)
|++. |+.|++++.+++.+|||.|-+
T Consensus 114 ~~~P--G~~TptE~~~A~~~Gad~vK~ 138 (217)
T 3lab_A 114 VFLP--GVATASEVMIAAQAGITQLKC 138 (217)
T ss_dssp EEEE--EECSHHHHHHHHHTTCCEEEE
T ss_pred eEeC--CCCCHHHHHHHHHcCCCEEEE
Confidence 7777 789999999999999999976
No 155
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.51 E-value=0.00023 Score=66.62 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=64.7
Q ss_pred HHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCC
Q 017718 214 WKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRR 288 (367)
Q Consensus 214 ~~~l~~~~~--~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~ 288 (367)
++.+|+..+ +++.+ .+.+.++++.+.++|+|+|.+++- + .+.+.++++.++ .+++|.++||| +
T Consensus 172 i~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~---~~~l~~~v~~l~~~~~~~~i~AsGGI-~ 239 (273)
T 2b7n_A 172 LTHARKNLPFTAKIEI-ECESFEEAKNAMNAGADIVMCDNL-------S---VLETKEIAAYRDAHYPFVLLEASGNI-S 239 (273)
T ss_dssp HHHHGGGSCTTCCEEE-EESSHHHHHHHHHHTCSEEEEETC-------C---HHHHHHHHHHHHHHCTTCEEEEESSC-C
T ss_pred HHHHHHhCCCCceEEE-EcCCHHHHHHHHHcCCCEEEECCC-------C---HHHHHHHHHHhhccCCCcEEEEECCC-C
Confidence 446666654 45665 677889999999999999999761 1 344555444442 24999999999 8
Q ss_pred HHHHHHHHHcCCCEEEechHHH
Q 017718 289 GTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.+.+.+..|||.+.+|+.+.
T Consensus 240 ~~ni~~~~~aGaD~i~vGs~i~ 261 (273)
T 2b7n_A 240 LESINAYAKSGVDAISVGALIH 261 (273)
T ss_dssp TTTHHHHHTTTCSEEECTHHHH
T ss_pred HHHHHHHHHcCCcEEEEcHHhc
Confidence 9999999999999999999743
No 156
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.50 E-value=0.00093 Score=62.49 Aligned_cols=86 Identities=15% Similarity=0.232 Sum_probs=56.1
Q ss_pred HHHHHhhcCCCEEEEecC------CHH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh-------cC
Q 017718 214 WKWLQTITKLPILVKGVL------TAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-------QG 276 (367)
Q Consensus 214 ~~~l~~~~~~Pv~vK~v~------~~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~-------~~ 276 (367)
+..+++..+ +..+|.+. +.+ .++.+.++|+|+|-.|. |-......+.....+.++.+.. +.
T Consensus 147 I~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTST-Gf~~~gAT~edv~lm~~~v~~~~~~~~~tg~ 224 (281)
T 2a4a_A 147 TQSVKKLLT-NKILKVIIEVGELKTEDLIIKTTLAVLNGNADFIKTST-GKVQINATPSSVEYIIKAIKEYIKNNPEKNN 224 (281)
T ss_dssp HHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCC-SCSSCCCCHHHHHHHHHHHHHHHHHCGGGTT
T ss_pred HHHHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCC-CCCCCCCCHHHHHHHHHHHHHhhcccccCCC
Confidence 335666553 35677762 333 25778999999999873 2111111123344444443322 56
Q ss_pred CCcEEEecCCCCHHHHHHHHHcCCC
Q 017718 277 RIPVFLDGGVRRGTDVFKALALGAS 301 (367)
Q Consensus 277 ~~~via~GGI~~~~dv~kal~lGAd 301 (367)
+++|-++|||++.+|+++++.+||+
T Consensus 225 ~vgVKaaGGIrt~e~al~~i~aga~ 249 (281)
T 2a4a_A 225 KIGLKVSGGISDLNTASHYILLARR 249 (281)
T ss_dssp CCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHHHHhhh
Confidence 8999999999999999999999987
No 157
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.49 E-value=0.00075 Score=63.43 Aligned_cols=84 Identities=25% Similarity=0.313 Sum_probs=65.4
Q ss_pred HHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 214 WKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 214 ~~~l~~~~~--~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
++.+|+..+ .+|.+ .+.+.++++.+.++|+|+|.+.|- ..+.++++++.+++++|+.++||| +.+.
T Consensus 186 v~~ar~~~~~~~~IgV-ev~t~eea~eA~~aGaD~I~ld~~----------~~~~~k~av~~v~~~ipi~AsGGI-t~en 253 (286)
T 1x1o_A 186 VRRAKARAPHYLKVEV-EVRSLEELEEALEAGADLILLDNF----------PLEALREAVRRVGGRVPLEASGNM-TLER 253 (286)
T ss_dssp HHHHHHHSCTTSCEEE-EESSHHHHHHHHHHTCSEEEEESC----------CHHHHHHHHHHHTTSSCEEEESSC-CHHH
T ss_pred HHHHHHhCCCCCEEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEEcCC-CHHH
Confidence 446666653 45655 667899999999999999999761 234455666666557999999999 4899
Q ss_pred HHHHHHcCCCEEEechHH
Q 017718 292 VFKALALGASGIFIGRPV 309 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~ 309 (367)
+.+..+.|+|.+.+|+.+
T Consensus 254 i~~~a~tGvD~IsVgs~~ 271 (286)
T 1x1o_A 254 AKAAAEAGVDYVSVGALT 271 (286)
T ss_dssp HHHHHHHTCSEEECTHHH
T ss_pred HHHHHHcCCCEEEEcHHH
Confidence 999999999999998854
No 158
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=97.46 E-value=0.00042 Score=61.61 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+.++.+...|+..+.+.+-+......+.. ++.+.++.+.. ++|+|+.||+.+++|+.+++..|||+|++|++++.
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~ 208 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALAASVFHF 208 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHT
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHc
Confidence 355678888888877764321111112333 67777776544 79999999999999999999999999999999874
No 159
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.44 E-value=0.00089 Score=62.04 Aligned_cols=83 Identities=25% Similarity=0.269 Sum_probs=54.7
Q ss_pred HHHHhhcC-CCEEEEecC------CHH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHH-----hcCCC
Q 017718 215 KWLQTITK-LPILVKGVL------TAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA-----TQGRI 278 (367)
Q Consensus 215 ~~l~~~~~-~Pv~vK~v~------~~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~-----~~~~~ 278 (367)
..+++..+ -+..+|.+. +.+ .++.+.++|+|+|-.|. | +..+..+.+.+..+++. ++.++
T Consensus 124 ~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTST-G---f~~~gAt~e~v~lm~~~I~~~~~g~~v 199 (260)
T 1p1x_A 124 KACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTST-G---KVAVNATPESARIMMEVIRDMGVEKTV 199 (260)
T ss_dssp HHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCC-S---CSSCCCCHHHHHHHHHHHHHHTCTTTC
T ss_pred HHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCC-C---CCCCCCCHHHHHHHHHHHHHhcCCCCc
Confidence 35555432 134567762 333 35678999999999873 2 11222344433333333 45689
Q ss_pred cEEEecCCCCHHHHHHHHHcCCC
Q 017718 279 PVFLDGGVRRGTDVFKALALGAS 301 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lGAd 301 (367)
+|-++|||++.+|+++++.+||+
T Consensus 200 ~VKaaGGIrt~~~al~~i~aga~ 222 (260)
T 1p1x_A 200 GFKPAGGVRTAEDAQKYLAIADE 222 (260)
T ss_dssp EEECBSSCCSHHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHhhhh
Confidence 99999999999999999999886
No 160
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=97.34 E-value=0.00089 Score=62.79 Aligned_cols=84 Identities=14% Similarity=0.194 Sum_probs=66.4
Q ss_pred HHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 214 WKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 214 ~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
|+.+|+.. ..|+.| .+-+.++++.+.++|+|.|.+.| .+.+.++++++.+++++++.++||| +.+.+
T Consensus 189 v~~ar~~~~~~~IeV-Ev~tl~ea~eAl~aGaD~I~LDn----------~~~~~l~~av~~~~~~v~ieaSGGI-t~~~i 256 (287)
T 3tqv_A 189 VTKAKKLDSNKVVEV-EVTNLDELNQAIAAKADIVMLDN----------FSGEDIDIAVSIARGKVALEVSGNI-DRNSI 256 (287)
T ss_dssp HHHHHHHCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------CCHHHHHHHHHHHTTTCEEEEESSC-CTTTH
T ss_pred HHHHHhhCCCCcEEE-EeCCHHHHHHHHHcCCCEEEEcC----------CCHHHHHHHHHhhcCCceEEEECCC-CHHHH
Confidence 34555543 467766 77889999999999999999987 2335677777777678999999999 66788
Q ss_pred HHHHHcCCCEEEechHH
Q 017718 293 FKALALGASGIFIGRPV 309 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~~ 309 (367)
.++...|+|.+.+|...
T Consensus 257 ~~~a~tGVD~IsvGalt 273 (287)
T 3tqv_A 257 VAIAKTGVDFISVGAIT 273 (287)
T ss_dssp HHHHTTTCSEEECSHHH
T ss_pred HHHHHcCCCEEEEChhh
Confidence 88888999999999754
No 161
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.30 E-value=0.00043 Score=65.57 Aligned_cols=84 Identities=17% Similarity=0.141 Sum_probs=63.6
Q ss_pred HHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhc---CCCcEEEecCCCC
Q 017718 214 WKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRR 288 (367)
Q Consensus 214 ~~~l~~~~~--~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~ 288 (367)
++.+|+..+ .++++ .+.+.++++.+.++|+|+|-+++- + .+.+.++++.++ .+++|.++||| +
T Consensus 187 i~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~-------~---~~~l~~~v~~l~~~~~~~~I~ASGGI-t 254 (299)
T 2jbm_A 187 VRAARQAADFALKVEV-ECSSLQEAVQAAEAGADLVLLDNF-------K---PEELHPTATVLKAQFPSVAVEASGGI-T 254 (299)
T ss_dssp HHHHHHHHTTTSCEEE-EESSHHHHHHHHHTTCSEEEEESC-------C---HHHHHHHHHHHHHHCTTSEEEEESSC-C
T ss_pred HHHHHHhCCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC-------C---HHHHHHHHHHhhccCCCeeEEEECCC-C
Confidence 345666553 46665 677889999999999999999761 1 344444444442 24999999999 8
Q ss_pred HHHHHHHHHcCCCEEEechHH
Q 017718 289 GTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig~~~ 309 (367)
.+.+.+....|||.+.+|+.+
T Consensus 255 ~~ni~~~~~aGaD~i~vGs~i 275 (299)
T 2jbm_A 255 LDNLPQFCGPHIDVISMGMLT 275 (299)
T ss_dssp TTTHHHHCCTTCCEEECTHHH
T ss_pred HHHHHHHHHCCCCEEEEChhh
Confidence 999999999999999999954
No 162
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.29 E-value=0.00034 Score=61.85 Aligned_cols=143 Identities=14% Similarity=0.112 Sum_probs=92.1
Q ss_pred ceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHH
Q 017718 124 IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAY 203 (367)
Q Consensus 124 ~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (367)
..+|=|+ .+-..+.+.++++++.|- -+++++|... |+ +. .....++
T Consensus 31 ~~ifll~--g~i~~l~~~v~~lk~~~K-~v~Vh~Dli~----------Gl------s~---------------d~~ai~f 76 (192)
T 3kts_A 31 TYMVMLE--THVAQLKALVKYAQAGGK-KVLLHADLVN----------GL------KN---------------DDYAIDF 76 (192)
T ss_dssp CEEEECS--EETTTHHHHHHHHHHTTC-EEEEEGGGEE----------TC------CC---------------SHHHHHH
T ss_pred CEEEEec--CcHHHHHHHHHHHHHcCC-eEEEecCchh----------cc------CC---------------cHHHHHH
Confidence 3445444 355667888999999994 5666888432 11 10 0112234
Q ss_pred hhhccCccc--c--HH---HHHhhcCCCEEEEec----CCHH-HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHH
Q 017718 204 VAGQIDRSL--S--WK---WLQTITKLPILVKGV----LTAE-DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV 271 (367)
Q Consensus 204 ~~~~~d~~~--~--~~---~l~~~~~~Pv~vK~v----~~~~-~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~ 271 (367)
+.....++. + -. ..| ..++..+-+.- .+.+ ..+.+.+...|++-+- .+ +. ...+.+++
T Consensus 77 L~~~~~pdGIIsTk~~~i~~Ak-~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiL-------PG-i~-p~iI~~i~ 146 (192)
T 3kts_A 77 LCTEICPDGIISTRGNAIMKAK-QHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELL-------PG-II-PEQVQKMT 146 (192)
T ss_dssp HHHTTCCSEEEESCHHHHHHHH-HTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEE-------CT-TC-HHHHHHHH
T ss_pred HHhCCCCCEEEeCcHHHHHHHH-HCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEEC-------Cc-hh-HHHHHHHH
Confidence 443223332 1 11 333 34665555543 2223 3566777788988763 12 22 26888888
Q ss_pred HHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 272 KATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 272 ~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+.+ ++|||+.|+|++.+|+.+++..||++|..++..+|.
T Consensus 147 ~~~--~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 147 QKL--HIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHH--CCCEEEESSCCSHHHHHHHHTTTEEEEEECCGGGGT
T ss_pred Hhc--CCCEEEECCcCCHHHHHHHHHcCCeEEEeCCHHHhC
Confidence 877 899999999999999999999999999999999883
No 163
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=97.25 E-value=0.00092 Score=65.53 Aligned_cols=88 Identities=23% Similarity=0.307 Sum_probs=62.6
Q ss_pred HHHhhcCCCEEEEecC--CHHHHHHHHHcCCcEEEEcCCCCCCCCCccc-hHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 216 WLQTITKLPILVKGVL--TAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~--~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+++. +.|++++... ..+.++.+.++|+|.+.+++....+...++. .++.+.++++.. ++||++ |||.+++|+
T Consensus 150 ~~~~~-g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~-ggi~t~e~a 225 (393)
T 2qr6_A 150 QVRDS-GEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIA-GGVNDYTTA 225 (393)
T ss_dssp HHHHT-TSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEE-ECCCSHHHH
T ss_pred HHhhc-CCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEE-CCcCCHHHH
Confidence 44443 7899888763 2455778889999999885422111122221 555577777776 799999 999999999
Q ss_pred HHHHHcCCCEEEech
Q 017718 293 FKALALGASGIFIGR 307 (367)
Q Consensus 293 ~kal~lGAd~V~ig~ 307 (367)
.+++.+|||+|.+|+
T Consensus 226 ~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 226 LHMMRTGAVGIIVGG 240 (393)
T ss_dssp HHHHTTTCSEEEESC
T ss_pred HHHHHcCCCEEEECC
Confidence 999999999999986
No 164
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.23 E-value=0.00081 Score=60.01 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=56.9
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEechHHHHHh
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYSL 313 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~-~~dv~kal~lGAd~V~ig~~~l~~l 313 (367)
-++.+.+.|+++++++.+ ..+.+.++++..+ .-+++++|||+. +.++.+++.+|||.+.+||+++.+
T Consensus 124 ~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~I~~a- 191 (208)
T 2czd_A 124 FIEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVKAGADYIIVGRAIYNA- 191 (208)
T ss_dssp HHHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHHHTCSEEEECHHHHTS-
T ss_pred HHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHHcCCCEEEEChHHhcC-
Confidence 367788999999988542 2234455666553 334779999986 558999999999999999998753
Q ss_pred hccChHHHHHHHHHHHHHH
Q 017718 314 AAEGEKGVRRVLEMLREEF 332 (367)
Q Consensus 314 ~~~G~~~v~~~i~~l~~el 332 (367)
.. ..+.++.+++++
T Consensus 192 --~d---p~~~~~~l~~~i 205 (208)
T 2czd_A 192 --PN---PREAAKAIYDEI 205 (208)
T ss_dssp --SS---HHHHHHHHHHHH
T ss_pred --CC---HHHHHHHHHHHH
Confidence 22 334556666554
No 165
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.22 E-value=0.00083 Score=61.32 Aligned_cols=72 Identities=19% Similarity=0.197 Sum_probs=58.0
Q ss_pred CHHHHHHHHHcCC-----cEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 232 TAEDARIAVQAGA-----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 232 ~~~~a~~~~~~G~-----d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
+++.++...++|. ..|.+.. .|. ....+.+.++++... ++|+++-|||++++++.+++. |||.|.+|
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~-----~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVG 218 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGT-----YGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR-YADTIIVG 218 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTS-----CCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH-HSSEEEEC
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCC-----cchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh-CCCEEEEC
Confidence 5677888878776 6777754 232 446788888887652 689999999999999999999 99999999
Q ss_pred hHHHH
Q 017718 307 RPVVY 311 (367)
Q Consensus 307 ~~~l~ 311 (367)
++++.
T Consensus 219 Sa~v~ 223 (234)
T 2f6u_A 219 NVIYE 223 (234)
T ss_dssp HHHHH
T ss_pred hHHHh
Confidence 98875
No 166
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.17 E-value=0.00032 Score=63.47 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 231 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
++.+.++.+.+.|++.+++.-....+.++...+.+-+..+++..+.+++|.++||| +++++.++..+|||.+.+||++.
T Consensus 122 ~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~aGad~~VvG~~I~ 200 (221)
T 3exr_A 122 WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEGVDVFTFIAGRGIT 200 (221)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTTCCCSEEEECHHHH
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHHCCCCEEEECchhh
Confidence 46788888888899988883211112223233344455555555447889999999 56678888889999999999865
Q ss_pred HHhhccChHHHHHHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLREEFEL 334 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~el~~ 334 (367)
.+ ..+ ...++.++++++.
T Consensus 201 ~a---~dp---~~a~~~~~~~~~~ 218 (221)
T 3exr_A 201 EA---KNP---AGAARAFKDEIKR 218 (221)
T ss_dssp TS---SSH---HHHHHHHHHHHHH
T ss_pred CC---CCH---HHHHHHHHHHHHH
Confidence 32 122 2345666666554
No 167
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.09 E-value=0.0064 Score=61.60 Aligned_cols=68 Identities=16% Similarity=0.236 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++.+.++|+|+|.+..+.|.. ...++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~~----~~~~~~i~~i~~~~~-~~pvi~-~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGNS----VYQIAMVHYIKQKYP-HLQVIG-GNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCCS----HHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccCCcc----hhHHHHHHHHHHhCC-CCceEe-cccchHHHHHHHHHcCCCEEEEC
Confidence 567889999999999994322211 234577888887763 688876 77999999999999999999773
No 168
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.07 E-value=0.0012 Score=60.61 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=55.9
Q ss_pred CHHHHHHHHHcCC----cEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 232 TAEDARIAVQAGA----AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 232 ~~~~a~~~~~~G~----d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+++.++...++|. -.|.+.. .|. ....+.+.++++.. .++||++-|||++++++.+++. |||+|.+|+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s-~G~-----~~~~~~i~~i~~~~-~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVL-ETSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHTC-SSSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CHHHHHHHHHhCcccCCCEEEEeC-CCc-----cChHHHHHHHHHhc-CCCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 4677777777763 5666654 232 44678888887754 2689999999999999999888 999999999
Q ss_pred HHHH
Q 017718 308 PVVY 311 (367)
Q Consensus 308 ~~l~ 311 (367)
++..
T Consensus 212 a~v~ 215 (240)
T 1viz_A 212 AVYE 215 (240)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8875
No 169
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.07 E-value=0.00048 Score=65.08 Aligned_cols=84 Identities=18% Similarity=0.151 Sum_probs=51.0
Q ss_pred HHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCC------CcEEEecC
Q 017718 214 WKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR------IPVFLDGG 285 (367)
Q Consensus 214 ~~~l~~~~~--~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~------~~via~GG 285 (367)
++.+++..+ +++++ .+.+.++++.+.++|+|+|-+++. ..+.+.++++.++++ ++|.++||
T Consensus 189 i~~~r~~~~~~~~i~v-ev~tlee~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~g~~~v~I~ASGG 257 (294)
T 3c2e_A 189 VKNARAVCGFAVKIEV-ECLSEDEATEAIEAGADVIMLDNF----------KGDGLKMCAQSLKNKWNGKKHFLLECSGG 257 (294)
T ss_dssp HHHHHHHHCTTSCEEE-ECSSSHHHHHHHHHTCSEEECCC-------------------------------CCEEEEECC
T ss_pred HHHHHHhcCcCCeEEE-ecCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhcccccCCCCeEEEEECC
Confidence 345566554 46665 667778899999999999998762 123444444444333 99999999
Q ss_pred CCCHHHHHHHHHcCCCEEEechHH
Q 017718 286 VRRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
| +.+.+.+....|+|.+.+|+.+
T Consensus 258 I-t~~ni~~~~~~GvD~i~vGs~i 280 (294)
T 3c2e_A 258 L-NLDNLEEYLCDDIDIYSTSSIH 280 (294)
T ss_dssp C-CC------CCCSCSEEECGGGT
T ss_pred C-CHHHHHHHHHcCCCEEEEechh
Confidence 9 8999999999999999999864
No 170
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.06 E-value=0.0043 Score=56.30 Aligned_cols=109 Identities=12% Similarity=0.136 Sum_probs=72.2
Q ss_pred HHHhhcCCCEEEEec--CCHHHHHHHHHcC-CcEEEEcC-CCCC-CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 216 WLQTITKLPILVKGV--LTAEDARIAVQAG-AAGIIVSN-HGAR-QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v--~~~~~a~~~~~~G-~d~i~vs~-~gg~-~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
.+|+ .++.+.+-.- ...+.++.+.+.| +|.|.+-. +.|. +....+..++.+.++++..+ +++|.++|||. .+
T Consensus 109 ~i~~-~G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~-~~~I~VdGGI~-~~ 185 (227)
T 1tqx_A 109 EIRD-NNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK-NLNIQVDGGLN-IE 185 (227)
T ss_dssp HHHT-TTCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT-TCEEEEESSCC-HH
T ss_pred HHHH-cCCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc-CCeEEEECCCC-HH
Confidence 4443 4555555442 3345667777776 99996532 3222 23446678888888887664 78999999998 67
Q ss_pred HHHHHHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHH
Q 017718 291 DVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~ 333 (367)
.+.++..+|||.+.+||.++.+ .. ....++.+++.++
T Consensus 186 ti~~~~~aGAd~~V~GsaIf~~---~d---~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 186 TTEISASHGANIIVAGTSIFNA---ED---PKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHTCCEEEESHHHHTC---SS---HHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeHHHhCC---CC---HHHHHHHHHHHHH
Confidence 8999999999999999986531 12 3345556655544
No 171
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=97.06 E-value=0.043 Score=49.72 Aligned_cols=107 Identities=20% Similarity=0.198 Sum_probs=75.5
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHH---HHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV---KATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~---~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
-++++-+-.+.+.+.|..+.++|+++|... =||-.+.+......+.+++ +..+-+..|++. +++++.++.++..
T Consensus 112 eGI~vNvTliFS~~QA~laa~AGa~~iSpF--VgRidd~g~dG~~~v~~i~~~~~~~~~~t~iL~A-S~r~~~~v~~~~l 188 (230)
T 1vpx_A 112 EGIKTNVTLVFSPAQAILAAKAGATYVSPF--VGRMDDLSNDGMRMLGEIVEIYNNYGFETEIIAA-SIRHPMHVVEAAL 188 (230)
T ss_dssp TTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHTCSCEEEEB-SCCSHHHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHhCCCeEEEec--cchhhhccccHHHHHHHHHHHHHHcCCCeEEEee-ccCCHHHHHHHHH
Confidence 389999999999999999999999988763 2332223333344444443 333335667776 4999999999999
Q ss_pred cCCCEEEechHHHHHhhccC--hHHHHHHHHHHHH
Q 017718 298 LGASGIFIGRPVVYSLAAEG--EKGVRRVLEMLRE 330 (367)
Q Consensus 298 lGAd~V~ig~~~l~~l~~~G--~~~v~~~i~~l~~ 330 (367)
+|||.+-+.-.++..+..++ .+|++.+.+.+.+
T Consensus 189 ~G~d~~Tip~~~l~~l~~h~lt~~gv~~F~~d~~~ 223 (230)
T 1vpx_A 189 MGVDIVTMPFAVLEKLFKHPMTDLGIERFMEDWKK 223 (230)
T ss_dssp HTCSEEEECHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred hCCCEEECCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999988888776544 3566666655544
No 172
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=97.04 E-value=0.0023 Score=60.27 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=65.3
Q ss_pred HHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 214 WKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 214 ~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
|+.+|+.. ..|+.| .+-+.++++.+.++|+|.|.+.| -+.+.++++++.+++++.+.++||| +.+.+
T Consensus 198 v~~ar~~~p~~kIeV-Ev~tl~e~~eAl~aGaDiImLDn----------~s~~~l~~av~~~~~~v~leaSGGI-t~~~i 265 (300)
T 3l0g_A 198 IQRLRKNLKNEYIAI-ECDNISQVEESLSNNVDMILLDN----------MSISEIKKAVDIVNGKSVLEVSGCV-NIRNV 265 (300)
T ss_dssp HHHHHHHSSSCCEEE-EESSHHHHHHHHHTTCSEEEEES----------CCHHHHHHHHHHHTTSSEEEEESSC-CTTTH
T ss_pred HHHHHHhCCCCCEEE-EECCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHhhcCceEEEEECCC-CHHHH
Confidence 44556543 356655 67889999999999999999987 2336667777767678999999999 56778
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
.++...|+|.+.+|..
T Consensus 266 ~~~A~tGVD~IsvGal 281 (300)
T 3l0g_A 266 RNIALTGVDYISIGCI 281 (300)
T ss_dssp HHHHTTTCSEEECGGG
T ss_pred HHHHHcCCCEEEeCcc
Confidence 8888899999999974
No 173
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=97.00 E-value=0.0018 Score=60.95 Aligned_cols=82 Identities=26% Similarity=0.374 Sum_probs=62.5
Q ss_pred HHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 017718 215 KWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 293 (367)
Q Consensus 215 ~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ 293 (367)
+.+|+.. ..|+.| .+-+.++++.+.++|+|.|.+.| .+.+.++++++.+..++++.++||| +.+.+.
T Consensus 201 ~~~r~~~p~~~ieV-Evdtlde~~eAl~aGaD~I~LDn----------~~~~~l~~av~~i~~~v~ieaSGGI-~~~~i~ 268 (298)
T 3gnn_A 201 DAAFALNAEVPVQI-EVETLDQLRTALAHGARSVLLDN----------FTLDMMRDAVRVTEGRAVLEVSGGV-NFDTVR 268 (298)
T ss_dssp HHHHHHC--CCCEE-EESSHHHHHHHHHTTCEEEEEES----------CCHHHHHHHHHHHTTSEEEEEESSC-STTTHH
T ss_pred HHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEEcCC-CHHHHH
Confidence 3555544 245544 46888999999999999999987 2335566666666668999999999 567788
Q ss_pred HHHHcCCCEEEechH
Q 017718 294 KALALGASGIFIGRP 308 (367)
Q Consensus 294 kal~lGAd~V~ig~~ 308 (367)
+....|+|.+.+|+.
T Consensus 269 ~~a~tGVD~isvG~l 283 (298)
T 3gnn_A 269 AIAETGVDRISIGAL 283 (298)
T ss_dssp HHHHTTCSEEECGGG
T ss_pred HHHHcCCCEEEECCe
Confidence 888899999999983
No 174
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.00 E-value=0.00081 Score=63.16 Aligned_cols=84 Identities=23% Similarity=0.187 Sum_probs=63.7
Q ss_pred HHHHHhhcC--CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC---CCcEEEecCCCC
Q 017718 214 WKWLQTITK--LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRR 288 (367)
Q Consensus 214 ~~~l~~~~~--~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~~~via~GGI~~ 288 (367)
++.+|+..+ .+|.+ .+.+.++++.+.++|+|+|.+.| -+.+.+.++++.+++ ++++.++||| +
T Consensus 183 v~~ar~~~~~~~~I~V-EV~tleea~eA~~aGaD~I~LDn----------~~~e~l~~av~~l~~~~~~v~ieASGGI-t 250 (285)
T 1o4u_A 183 VQEVRKIIPFTTKIEV-EVENLEDALRAVEAGADIVMLDN----------LSPEEVKDISRRIKDINPNVIVEVSGGI-T 250 (285)
T ss_dssp HHHHHTTSCTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------CCHHHHHHHHHHHHHHCTTSEEEEEECC-C
T ss_pred HHHHHHhCCCCceEEE-EeCCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhhccCCCceEEEECCC-C
Confidence 446666552 56666 67789999999999999999987 123445555554433 7999999999 5
Q ss_pred HHHHHHHHHcCCCEEEechHH
Q 017718 289 GTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig~~~ 309 (367)
.+.+.++...|+|.+.+|+..
T Consensus 251 ~eni~~~a~tGVD~IsvGslt 271 (285)
T 1o4u_A 251 EENVSLYDFETVDVISSSRLT 271 (285)
T ss_dssp TTTGGGGCCTTCCEEEEGGGT
T ss_pred HHHHHHHHHcCCCEEEEeHHH
Confidence 688888888999999999843
No 175
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.97 E-value=0.0043 Score=58.96 Aligned_cols=83 Identities=22% Similarity=0.256 Sum_probs=65.3
Q ss_pred HHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 214 WKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 214 ~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
++..|+.. ..|+.| .+-+.++++.+.++|+|+|.+.| .+.+.++++++.++++++|.++|||. .+.+
T Consensus 222 v~~ar~~~p~~kIeV-EVdtldea~eAl~aGaD~I~LDn----------~~~~~l~~av~~l~~~v~ieaSGGIt-~~~I 289 (320)
T 3paj_A 222 ISTAKQLNPGKPVEV-ETETLAELEEAISAGADIIMLDN----------FSLEMMREAVKINAGRAALENSGNIT-LDNL 289 (320)
T ss_dssp HHHHHHHSTTSCEEE-EESSHHHHHHHHHTTCSEEEEES----------CCHHHHHHHHHHHTTSSEEEEESSCC-HHHH
T ss_pred HHHHHHhCCCCeEEE-EECCHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEEECCCC-HHHH
Confidence 33555554 346655 67889999999999999999987 13466777777776789999999995 7778
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
.+....|+|.+.+|+.
T Consensus 290 ~~~a~tGVD~isvGal 305 (320)
T 3paj_A 290 KECAETGVDYISVGAL 305 (320)
T ss_dssp HHHHTTTCSEEECTHH
T ss_pred HHHHHcCCCEEEECce
Confidence 8888899999999984
No 176
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.92 E-value=0.0038 Score=55.85 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=64.9
Q ss_pred cCCCEEEEec--CCHHHHHHHHHcCCcEEEEcCCCCC----CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 221 TKLPILVKGV--LTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 221 ~~~Pv~vK~v--~~~~~a~~~~~~G~d~i~vs~~gg~----~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
.+.++.++.. .+...++.+.+.|.+.+++.- +.. ..++ ..+.+.++++..+..+||+++|||+ ++.+.+
T Consensus 105 ~g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~-a~~~~~~G~~g---~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~ 179 (216)
T 1q6o_A 105 FNGDVQIELTGYWTWEQAQQWRDAGIGQVVYHR-SRDAQAAGVAW---GEADITAIKRLSDMGFKVTVTGGLA-LEDLPL 179 (216)
T ss_dssp TTCEEEEEECSCCCHHHHHHHHHTTCCEEEEEC-CHHHHHTTCCC---CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGG
T ss_pred cCCCceeeeeeCCChhhHHHHHhcCcHHHHHHH-HHHHHhcCCCC---CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHH
Confidence 4667655433 225566777778888777721 110 0112 3455566665554478899999998 777888
Q ss_pred HHHcCCCEEEechHHHHHhhccChHHHHHHHHHHHHHHH
Q 017718 295 ALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 295 al~lGAd~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~ 333 (367)
++.+|||.+.+||+++.+ ..+ .+.++.++++++
T Consensus 180 ~~~aGad~ivvG~~I~~a---~dp---~~~~~~~~~~i~ 212 (216)
T 1q6o_A 180 FKGIPIHVFIAGRSIRDA---ASP---VEAARQFKRSIA 212 (216)
T ss_dssp GTTSCCSEEEESHHHHTS---SCH---HHHHHHHHHHHH
T ss_pred HHHcCCCEEEEeehhcCC---CCH---HHHHHHHHHHHH
Confidence 999999999999998642 122 234555555554
No 177
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=96.92 E-value=0.05 Score=53.12 Aligned_cols=204 Identities=24% Similarity=0.303 Sum_probs=112.4
Q ss_pred CCCCCccceeEcCeeec---cceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCCCCCHHHHHhhCCCceEEEEe
Q 017718 55 DVSKIDMNTTVLGFKIS---MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLY 130 (367)
Q Consensus 55 ~~~~vd~st~i~g~~l~---~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~QLy 130 (367)
....-|+.+++.+..+. .+++++|.+.. ..+.-..++++++++|+.++. +++...+ .+..||
T Consensus 123 ~~~~~~t~i~i~~~~iG~~~~~~Iigpcsve---s~e~a~~~a~~~k~aGa~~vk~q~fkprt---------s~~~f~-- 188 (385)
T 3nvt_A 123 KNKKEDTIVTVKGLPIGNGEPVFVFGPCSVE---SYEQVAAVAESIKAKGLKLIRGGAFKPRT---------SPYDFQ-- 188 (385)
T ss_dssp TTCCSCCCEEETTEEETSSSCEEEEECSBCC---CHHHHHHHHHHHHHTTCCEEECBSSCCCS---------STTSCC--
T ss_pred ccCCCCcEEEECCEEECCCCeEEEEEeCCcC---CHHHHHHHHHHHHHcCCCeEEcccccCCC---------ChHhhc--
Confidence 34445667777766653 36788887654 233345799999999999875 4443211 122233
Q ss_pred ecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCc
Q 017718 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDR 210 (367)
Q Consensus 131 ~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 210 (367)
+-..+....+.+.+++.|...+. ++--|. .-+....+ .+ -+ .-+..
T Consensus 189 -gl~~egl~~L~~~~~~~Gl~~~t-e~~d~~----~~~~l~~~-vd-~l--------------------------kIgs~ 234 (385)
T 3nvt_A 189 -GLGLEGLKILKRVSDEYGLGVIS-EIVTPA----DIEVALDY-VD-VI--------------------------QIGAR 234 (385)
T ss_dssp -CCTHHHHHHHHHHHHHHTCEEEE-ECCSGG----GHHHHTTT-CS-EE--------------------------EECGG
T ss_pred -CCCHHHHHHHHHHHHHcCCEEEE-ecCCHH----HHHHHHhh-CC-EE--------------------------EECcc
Confidence 22345566666777788877653 222111 11111000 00 00 00001
Q ss_pred cc-cHHHHH--hhcCCCEEEEecC--CHHH----HHHHHHcCCcEEEEcCCCCCCCCC-c--cchHHHHHHHHHHhcCCC
Q 017718 211 SL-SWKWLQ--TITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDY-V--PATIMALEEVVKATQGRI 278 (367)
Q Consensus 211 ~~-~~~~l~--~~~~~Pv~vK~v~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~-~--~~~~~~l~~i~~~~~~~~ 278 (367)
.. ++..++ ..+++||++|..+ +.++ ++.+.+.|.+-|++--.|.++... . ...+..++.+++.. .+
T Consensus 235 ~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~--~l 312 (385)
T 3nvt_A 235 NMQNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKET--HL 312 (385)
T ss_dssp GTTCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SS
T ss_pred cccCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhc--CC
Confidence 11 223222 3468999999875 5555 455667787666665334443322 1 22455677776655 68
Q ss_pred cEEEe----cCCCCH--HHHHHHHHcCCCEEEechH
Q 017718 279 PVFLD----GGVRRG--TDVFKALALGASGIFIGRP 308 (367)
Q Consensus 279 ~via~----GGI~~~--~dv~kal~lGAd~V~ig~~ 308 (367)
||+.| +|-+.- .=...|.++|||+++|=.-
T Consensus 313 pV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H 348 (385)
T 3nvt_A 313 PVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVH 348 (385)
T ss_dssp CEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBC
T ss_pred CEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEec
Confidence 99887 333332 2245688899999999873
No 178
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.89 E-value=0.0011 Score=60.74 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
.+.|+...+.|+|.+.+-.-.+ ...+.....+.+.++.+.+ .+|+...|||++-+|+.+.|.+|||-|.+++..
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~-a~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a 107 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTG-AKDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMA 107 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHH-HHCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHHTTCSEEEECTTT
T ss_pred HHHHHHHHHCCCCEEEEEecCc-ccccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHHcCCCEEEEcccc
Confidence 3668999999999998743111 0123456778888888877 799999999999999999999999999999954
No 179
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.88 E-value=0.0085 Score=61.17 Aligned_cols=97 Identities=13% Similarity=0.065 Sum_probs=66.5
Q ss_pred HHHHHhhcC-CCEEEEecCCHHHHHHHHHcC---CcEEEEcCCCCC-CC-CC--ccchHHHHHHHHHHhc----CCCcEE
Q 017718 214 WKWLQTITK-LPILVKGVLTAEDARIAVQAG---AAGIIVSNHGAR-QL-DY--VPATIMALEEVVKATQ----GRIPVF 281 (367)
Q Consensus 214 ~~~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G---~d~i~vs~~gg~-~~-~~--~~~~~~~l~~i~~~~~----~~~~vi 281 (367)
...+|+..+ -.++---+.+.++++.+.+.| +|+|.++--..+ +. +. .+..++.+.++.+.+. .++|++
T Consensus 98 ~~~ar~~lg~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvv 177 (540)
T 3nl6_A 98 IPMIRKLVGPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTV 177 (540)
T ss_dssp HHHHHHHHCTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHhCCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEE
Confidence 335555443 223333347899999999999 999998532211 11 11 1234667777766541 379999
Q ss_pred EecCCCCHHHHHHHHH--------cCCCEEEechHHHH
Q 017718 282 LDGGVRRGTDVFKALA--------LGASGIFIGRPVVY 311 (367)
Q Consensus 282 a~GGI~~~~dv~kal~--------lGAd~V~ig~~~l~ 311 (367)
+.||| +.+++.+.+. .|||+|.+++.++.
T Consensus 178 AIGGI-~~~ni~~v~~~~~~~g~~~GadgvAVvsaI~~ 214 (540)
T 3nl6_A 178 GIGGL-HPDNIERVLYQCVSSNGKRSLDGICVVSDIIA 214 (540)
T ss_dssp EESSC-CTTTHHHHHHHCBCTTSSCBCSCEEESHHHHT
T ss_pred EEcCC-CHHHHHHHHHhhcccccccCceEEEEeHHHhc
Confidence 99999 7899999998 89999999998863
No 180
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.87 E-value=0.0022 Score=57.74 Aligned_cols=86 Identities=21% Similarity=0.203 Sum_probs=59.9
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEechHHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~-~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+-++.+.++|+||++++.+ ..+.+..+++.++ + .++.++||+- +.+..+++..|||.+.+||+++.+
T Consensus 119 ~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~~Gad~iVvGr~I~~a 186 (215)
T 3ve9_A 119 YLREVARRVNPKGFVAPAT----------RPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALCHGADYEIVGRSVYQS 186 (215)
T ss_dssp HHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHHTTCSEEEECHHHHTS
T ss_pred HHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHHcCCCEEEeCHHHcCC
Confidence 4577888999999998531 2345566776665 4 6888999984 336777889999999999999853
Q ss_pred hhccChHHHHHHHHHHHHHHHHHHH
Q 017718 313 LAAEGEKGVRRVLEMLREEFELAMA 337 (367)
Q Consensus 313 l~~~G~~~v~~~i~~l~~el~~~m~ 337 (367)
..+ ...++.+++|++....
T Consensus 187 ---~dp---~~a~~~i~~~i~~~~~ 205 (215)
T 3ve9_A 187 ---ADP---VRKLEEIVRSQEEVLS 205 (215)
T ss_dssp ---SSH---HHHHHHHHHHHHHHC-
T ss_pred ---CCH---HHHHHHHHHHHHHHHH
Confidence 222 2355667777665543
No 181
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.85 E-value=0.0027 Score=59.63 Aligned_cols=84 Identities=14% Similarity=0.169 Sum_probs=62.2
Q ss_pred HHHHHhhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC---CCcEEEecCCCCH
Q 017718 214 WKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRG 289 (367)
Q Consensus 214 ~~~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~~~via~GGI~~~ 289 (367)
|+..|+..+ .|+.+ .+.+.++++.+.++|+|.|.+.|- +.+.+.++++.+++ +++|.++||| +.
T Consensus 185 v~~ar~~~~~~~I~V-ev~t~eea~eal~aGaD~I~LDn~----------~~~~~~~~v~~l~~~~~~v~ieaSGGI-t~ 252 (284)
T 1qpo_A 185 LRAVRNAAPDLPCEV-EVDSLEQLDAVLPEKPELILLDNF----------AVWQTQTAVQRRDSRAPTVMLESSGGL-SL 252 (284)
T ss_dssp HHHHHHHCTTSCEEE-EESSHHHHHHHGGGCCSEEEEETC----------CHHHHHHHHHHHHHHCTTCEEEEESSC-CT
T ss_pred HHHHHHhCCCCCEEE-EeCCHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCeEEEEECCC-CH
Confidence 445555542 35655 677899999999999999999871 22334444444333 7999999999 67
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
+.+.++...|+|.+.+|+..
T Consensus 253 ~~i~~~a~tGVD~isvG~l~ 272 (284)
T 1qpo_A 253 QTAATYAETGVDYLAVGALT 272 (284)
T ss_dssp TTHHHHHHTTCSEEECGGGT
T ss_pred HHHHHHHhcCCCEEEECHHH
Confidence 88999999999999999843
No 182
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=96.80 E-value=0.077 Score=49.91 Aligned_cols=179 Identities=12% Similarity=0.040 Sum_probs=108.5
Q ss_pred hHHHHHHHHHcCCceee-cCC----C--------CCCHHHHH-------hhCCCceEEEE---eecCCHHHHHHHHHHHH
Q 017718 90 EYATARAASAAGTIMTL-SSW----S--------TSSVEEVA-------STGPGIRFFQL---YVYKDRNVVAQLVRRAE 146 (367)
Q Consensus 90 e~~~a~aa~~~G~~~~v-s~~----~--------~~~~e~i~-------~~~~~~~~~QL---y~~~d~~~~~~~l~ra~ 146 (367)
|...|+.+.+.|+..+. |.. + ..+++++. ...+.|....+ | +.+++...+.+++.+
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gy-g~~~~~~~~~v~~l~ 104 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGF-GSSAFNVARTVKSMI 104 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCS-SSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCccc-CCCHHHHHHHHHHHH
Confidence 56899999999988664 311 1 13555543 33345677777 5 347888888999999
Q ss_pred HcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHhhc-CCCE
Q 017718 147 RAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQTIT-KLPI 225 (367)
Q Consensus 147 ~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~Pv 225 (367)
++|+.++.|.=.+. |++.. .+.+ ..+.+ ..+++. .++.+++.. +.++
T Consensus 105 ~aGa~gv~iEd~~~---------------~k~cg--H~~g---k~L~p-----~~~~~~-------~I~Aa~~a~~~~~~ 152 (295)
T 1xg4_A 105 KAGAAGLHIEDQVG---------------AKRSG--HRPN---KAIVS-----KEEMVD-------RIRAAVDAKTDPDF 152 (295)
T ss_dssp HHTCSEEEEECBCS---------------SCCCT--TSSS---CCBCC-----HHHHHH-------HHHHHHHHCSSTTS
T ss_pred HcCCeEEEECCCCC---------------CcccC--CCCC---CccCC-----HHHHHH-------HHHHHHHhccCCCc
Confidence 99999998754331 21110 0000 00000 000000 122333322 4567
Q ss_pred EEEecCC----------HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC--CCH-HHH
Q 017718 226 LVKGVLT----------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV--RRG-TDV 292 (367)
Q Consensus 226 ~vK~v~~----------~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI--~~~-~dv 292 (367)
.+....+ .+.|+.+.++|||.|.+- + +++.+.+.++.+.+ ++|++++.-. .++ ...
T Consensus 153 ~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e--~-------~~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~ 221 (295)
T 1xg4_A 153 VIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPE--A-------ITELAMYRQFADAV--QVPILANITEFGATPLFTT 221 (295)
T ss_dssp EEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEET--T-------CCSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCH
T ss_pred EEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEe--C-------CCCHHHHHHHHHHc--CCCEEEEecccCCCCCCCH
Confidence 6766532 245888999999999993 2 35678888888888 7999875532 222 233
Q ss_pred HHHHHcCCCEEEechHHHHH
Q 017718 293 FKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~~l~~ 312 (367)
.+.-.+|.+.|.+|...+.+
T Consensus 222 ~eL~~~G~~~v~~~~~~~~a 241 (295)
T 1xg4_A 222 DELRSAHVAMALYPLSAFRA 241 (295)
T ss_dssp HHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHcCCCEEEEChHHHHH
Confidence 44446999999999987765
No 183
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.77 E-value=0.012 Score=53.42 Aligned_cols=37 Identities=30% Similarity=0.529 Sum_probs=34.2
Q ss_pred cCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 275 QGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 275 ~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
..+++|+.-|||.++.|+..+...|+|++.||++++.
T Consensus 171 ~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~ 207 (226)
T 1w0m_A 171 FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVK 207 (226)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHT
T ss_pred cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHC
Confidence 4578999999999999999999999999999999886
No 184
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.70 E-value=0.031 Score=49.70 Aligned_cols=118 Identities=11% Similarity=0.073 Sum_probs=79.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+++++++++|++.+-+ +.|-
T Consensus 20 ~~~~~~~~~a~~~~~~Ga~~i~~--~~~~--------------------------------------------------- 46 (223)
T 1y0e_A 20 HSSFIMSKMALAAYEGGAVGIRA--NTKE--------------------------------------------------- 46 (223)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEE--ESHH---------------------------------------------------
T ss_pred CCCccHHHHHHHHHHCCCeeecc--CCHH---------------------------------------------------
Confidence 36788889999999999998743 2100
Q ss_pred cHHHHHhhcCCCEEE--E-e--------cCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 213 SWKWLQTITKLPILV--K-G--------VLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 ~~~~l~~~~~~Pv~v--K-~--------v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
..+.+++.+++|++- | . ..+.+.+..+.++|+|.|.+...-. .+......+.+.++++..+ ..+++
T Consensus 47 ~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~--~~p~~~~~~~i~~~~~~~~-~~~v~ 123 (223)
T 1y0e_A 47 DILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQ--QRPKETLDELVSYIRTHAP-NVEIM 123 (223)
T ss_dssp HHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCS--CCSSSCHHHHHHHHHHHCT-TSEEE
T ss_pred HHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecc--cCcccCHHHHHHHHHHhCC-CceEE
Confidence 123566667788741 1 1 1346778899999999999843111 1111234567777777653 45665
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEechH
Q 017718 282 LDGGVRRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lGAd~V~ig~~ 308 (367)
. ++.+.+++.++..+|+|.++++.+
T Consensus 124 ~--~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 124 A--DIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp E--ECSSHHHHHHHHHTTCSEEECTTT
T ss_pred e--cCCCHHHHHHHHHcCCCEEEeCCC
Confidence 5 578999999999999999988654
No 185
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=96.65 E-value=0.0011 Score=61.57 Aligned_cols=119 Identities=17% Similarity=0.120 Sum_probs=80.1
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHh
Q 017718 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT 219 (367)
Q Consensus 140 ~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 219 (367)
+..+.+|++|+.++.+-..||. |+|... ++ .+..+| -.++.+++
T Consensus 22 eqa~iae~aGa~av~~l~~~p~------d~r~~g----Gv-------------------------~Rm~dp-~~I~~I~~ 65 (291)
T 3o07_A 22 EQAKIAEKSGACAVMALESIPA------DMRKSG----KV-------------------------CRMSDP-KMIKDIMN 65 (291)
T ss_dssp HHHHHHHHHTCSEEEECSSCHH------HHHTTT----CC-------------------------CCCCCH-HHHHHHHT
T ss_pred HHHHHHHHhCchhhhhccCCCc------hhhhcC----Cc-------------------------cccCCH-HHHHHHHH
Confidence 4577889999999999999986 444111 00 010111 14568889
Q ss_pred hcCCCEEEEec-CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHc
Q 017718 220 ITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALAL 298 (367)
Q Consensus 220 ~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~l 298 (367)
.+++||+-|.. .+..+|+.+.++|+|.|.-|. +-+ ..+....|.+. .-++|+++ |++|-++++.++..
T Consensus 66 aVsIPVm~k~righ~~EAqilea~GaD~IDese-vlt-------pad~~~~I~k~-~f~vpfv~--~~~~l~EAlrri~e 134 (291)
T 3o07_A 66 SVSIPVMAKVRIGHFVEAQIIEALEVDYIDESE-VLT-------PADWTHHIEKD-KFKVPFVC--GAKDLGEALRRINE 134 (291)
T ss_dssp TCSSCEEEEEETTCHHHHHHHHHTTCSEEEEET-TSC-------CSCSSCCCCGG-GCSSCEEE--EESSHHHHHHHHHH
T ss_pred hCCCCeEEEEecCcHHHHHHHHHcCCCEEeccc-CCC-------HHHHHHHhhhh-cCCCcEEe--eCCCHHHHHHHHHC
Confidence 99999999986 568899999999999997652 111 11111112111 11566665 58999999999999
Q ss_pred CCCEEEe
Q 017718 299 GASGIFI 305 (367)
Q Consensus 299 GAd~V~i 305 (367)
||+.|.-
T Consensus 135 GA~mIrT 141 (291)
T 3o07_A 135 GAAMIRT 141 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 9998864
No 186
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.61 E-value=0.0059 Score=55.21 Aligned_cols=88 Identities=14% Similarity=0.164 Sum_probs=60.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEEechHHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.+-++.+.++|+||++++. ...+.+..+++.++ + -++..+||+-. .+..+++..|||.+.+|||+..
T Consensus 125 ~~~a~~a~~~g~~GvV~sa----------t~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~ 192 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG----------TKLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYN 192 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT----------TCHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHT
T ss_pred HHHHHHHHHhCCCEEEECC----------CCHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcC
Confidence 4568889999999999853 11244566666665 4 57788999743 2566788899999999999986
Q ss_pred HhhccChHHHHHHHHHHHHHHHHHHHH
Q 017718 312 SLAAEGEKGVRRVLEMLREEFELAMAL 338 (367)
Q Consensus 312 ~l~~~G~~~v~~~i~~l~~el~~~m~~ 338 (367)
+ ..+ ....+.++++++.....
T Consensus 193 A---~dP---~~aa~~i~~~i~~~~~~ 213 (222)
T 4dbe_A 193 A---GNP---LTALRTINKIIEDKVMK 213 (222)
T ss_dssp S---SSH---HHHHHHHHHHHHHHHHH
T ss_pred C---CCH---HHHHHHHHHHHHHHHHH
Confidence 3 222 23455666666665443
No 187
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.56 E-value=0.0065 Score=55.59 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=54.0
Q ss_pred HHHHHHHHcCCcEEEEcCC--CCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNH--GARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~--gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
+.++.+.+.|+..|++..- =|+ -.| +.++.+.++.+.+. ++|||++||+++.+|+.+ +..++++|.+|++|.+
T Consensus 155 ~~~~~~~~~g~~eil~t~Id~DGt--~~G-~d~~l~~~l~~~~~-~ipviasGGv~~~~Dl~~-l~~~~~gvivg~Al~~ 229 (243)
T 4gj1_A 155 EVLDFYSNKGLKHILCTDISKDGT--MQG-VNVRLYKLIHEIFP-NICIQASGGVASLKDLEN-LKGICSGVIVGKALLD 229 (243)
T ss_dssp HHHHHHHTTTCCEEEEEETTC-------C-CCHHHHHHHHHHCT-TSEEEEESCCCSHHHHHH-TTTTCSEEEECHHHHT
T ss_pred HHHHHHhhcCCcEEEeeeeccccc--ccC-CCHHHHHHHHHhcC-CCCEEEEcCCCCHHHHHH-HHccCchhehHHHHHC
Confidence 5577788899999888531 111 112 46778888877652 699999999999999876 4667999999999865
No 188
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=96.54 E-value=0.0068 Score=55.34 Aligned_cols=68 Identities=9% Similarity=-0.085 Sum_probs=49.2
Q ss_pred cCCcEEEE-cCCCCC-CCCCccchHHHHHHHHHHhcC---CCcEEEecCCCCHHHHHHHHH--cCCCEEEechHHH
Q 017718 242 AGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQG---RIPVFLDGGVRRGTDVFKALA--LGASGIFIGRPVV 310 (367)
Q Consensus 242 ~G~d~i~v-s~~gg~-~~~~~~~~~~~l~~i~~~~~~---~~~via~GGI~~~~dv~kal~--lGAd~V~ig~~~l 310 (367)
.++|.|.+ +-+.|. +....+...+.+.++++.... +++|.++|||. .+.+.++.. .|||.+.+||+++
T Consensus 147 ~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 147 DQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp TTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHHHSSSCCCCEEECGGGG
T ss_pred hcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHHHhCCCCcEEEEeeHHh
Confidence 47998865 223222 112344566777777776532 58999999998 688999999 9999999999875
No 189
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.54 E-value=0.0024 Score=65.47 Aligned_cols=76 Identities=21% Similarity=0.220 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCcEEEEcCCCCC-CC-CCccchHHHHHHHHHHhcCCCcEEEecCCCCH-----------HHHHHHHHcCC
Q 017718 234 EDARIAVQAGAAGIIVSNHGAR-QL-DYVPATIMALEEVVKATQGRIPVFLDGGVRRG-----------TDVFKALALGA 300 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~-~~-~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-----------~dv~kal~lGA 300 (367)
+.|+.+.+.|+|+|.+.+-.+. .. .......+.+.++.+.+ .+||++.|||++. +++.+++.+||
T Consensus 284 ~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 284 QLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 5588899999999988763321 11 11233577777776655 7999999999998 44999999999
Q ss_pred CEEEechHHHH
Q 017718 301 SGIFIGRPVVY 311 (367)
Q Consensus 301 d~V~ig~~~l~ 311 (367)
|.|.||+..+.
T Consensus 362 d~V~igt~~~~ 372 (555)
T 1jvn_A 362 DKVSIGTDAVY 372 (555)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEECCHHhh
Confidence 99999998754
No 190
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.44 E-value=0.037 Score=49.22 Aligned_cols=110 Identities=25% Similarity=0.268 Sum_probs=73.6
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+.+...++++.+.+.|++.+-++..+|.. .+
T Consensus 21 ~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~--------------------------------------~~--------- 53 (207)
T 2yw3_A 21 VRGGEDLLGLARVLEEEGVGALEITLRTEKG--------------------------------------LE--------- 53 (207)
T ss_dssp CCSCCCHHHHHHHHHHTTCCEEEEECSSTHH--------------------------------------HH---------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCChHH--------------------------------------HH---------
Confidence 4455556677888888999988876543310 00
Q ss_pred ccHHHHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 212 LSWKWLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 212 ~~~~~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
.++.+++ -++.+....+.+.++++.+.++|+|+++.. + ...+.+...++ . .++++. |+.|.++
T Consensus 54 -~i~~~~~-~~~~~gag~vl~~d~~~~A~~~GAd~v~~~---~-------~d~~v~~~~~~-~--g~~~i~--G~~t~~e 116 (207)
T 2yw3_A 54 -ALKALRK-SGLLLGAGTVRSPKEAEAALEAGAAFLVSP---G-------LLEEVAALAQA-R--GVPYLP--GVLTPTE 116 (207)
T ss_dssp -HHHHHTT-SSCEEEEESCCSHHHHHHHHHHTCSEEEES---S-------CCHHHHHHHHH-H--TCCEEE--EECSHHH
T ss_pred -HHHHHhC-CCCEEEeCeEeeHHHHHHHHHcCCCEEEcC---C-------CCHHHHHHHHH-h--CCCEEe--cCCCHHH
Confidence 1124444 345555555677899999999999999652 1 12233333332 3 467665 3999999
Q ss_pred HHHHHHcCCCEEEe
Q 017718 292 VFKALALGASGIFI 305 (367)
Q Consensus 292 v~kal~lGAd~V~i 305 (367)
+.+++.+|||.|.+
T Consensus 117 ~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 117 VERALALGLSALKF 130 (207)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHHCCCCEEEE
Confidence 99999999999988
No 191
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=96.38 E-value=0.039 Score=51.53 Aligned_cols=68 Identities=16% Similarity=0.295 Sum_probs=48.9
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCEEEec
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASGIFIG 306 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~-lGAd~V~ig 306 (367)
+..+.+.+.|+|.|-.|+ + ....+.-++.|+++.+..+++++|++.|||+. +.+.+.+. +|++.+=..
T Consensus 170 ~Ale~Li~lGvdrILTSG--~--~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~-~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSG--C--DSSALEGLPLIKRLIEQAKGRIVVMPGGGITD-RNLQRILEGSGATEFHCS 238 (287)
T ss_dssp HHHHHHHHHTCSEEEECT--T--SSSTTTTHHHHHHHHHHHTTSSEEEECTTCCT-TTHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHcCCCEEECCC--C--CCChHHhHHHHHHHHHHhCCCCEEEECCCcCH-HHHHHHHHhhCCCEEeEC
Confidence 446778888999998854 2 22345566777777776666899999999864 55666666 899877543
No 192
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.37 E-value=0.019 Score=52.18 Aligned_cols=86 Identities=15% Similarity=0.198 Sum_probs=55.4
Q ss_pred cCCcEEEE-cCCCCC-CCCCccchHHHHHHHHHHhc---CCCcEEEecCCCCHHHHHHHHHcCCCEEEec-hHHHHHhhc
Q 017718 242 AGAAGIIV-SNHGAR-QLDYVPATIMALEEVVKATQ---GRIPVFLDGGVRRGTDVFKALALGASGIFIG-RPVVYSLAA 315 (367)
Q Consensus 242 ~G~d~i~v-s~~gg~-~~~~~~~~~~~l~~i~~~~~---~~~~via~GGI~~~~dv~kal~lGAd~V~ig-~~~l~~l~~ 315 (367)
.++|.|.+ +-+.|. +....+..++.+.++++... .+++|.++|||. .+.+.++..+|||.+.+| |.++.+
T Consensus 127 ~~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~aGAd~~V~G~saif~~--- 202 (231)
T 3ctl_A 127 HKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMAAGADVFIVGTSGLFNH--- 202 (231)
T ss_dssp GGCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHHHTCCEEEECTTTTGGG---
T ss_pred hcCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHHcCCCEEEEccHHHhCC---
Confidence 37898865 223332 22335567777777766542 268999999998 567888999999999999 766421
Q ss_pred cChHHHHHHHHHHHHHHH
Q 017718 316 EGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 316 ~G~~~v~~~i~~l~~el~ 333 (367)
... ....++.+++.++
T Consensus 203 ~d~--~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 203 AEN--IDEAWRIMTAQIL 218 (231)
T ss_dssp CSS--HHHHHHHHHHHHH
T ss_pred CCc--HHHHHHHHHHHHH
Confidence 120 2345556655544
No 193
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.35 E-value=0.012 Score=53.51 Aligned_cols=61 Identities=13% Similarity=0.181 Sum_probs=47.3
Q ss_pred CCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHH
Q 017718 243 GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 243 G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~ 311 (367)
|...|.+-. .|. ....+.+.++++.. .++|++.-|||++++++.++.. |||+|.+|+++..
T Consensus 159 g~~~vY~e~-sG~-----~g~~~~v~~ir~~~-~~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 159 RLPVMYIEY-SGI-----YGDVSKVQAVSEHL-TETQLFYGGGISSEQQATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CCSEEEEEC-TTS-----CCCHHHHHHHHTTC-SSSEEEEESCCCSHHHHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEEec-CCC-----cCCHHHHHHHHHhc-CCCCEEEECCcCCHHHHHHHHc-CCCEEEECCceec
Confidence 677777744 232 12567777777644 2689999999999999988776 9999999998875
No 194
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.33 E-value=0.087 Score=49.23 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=54.5
Q ss_pred HHHhhcCCCEEEEec-----C-CHH----HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh-----------
Q 017718 216 WLQTITKLPILVKGV-----L-TAE----DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT----------- 274 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-----~-~~~----~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~----------- 274 (367)
.+++..+ +..+|.+ + +.+ .++.+.++|+|+|-.|. |-......+.....+.+..+..
T Consensus 143 ~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTST-Gf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~ 220 (297)
T 4eiv_A 143 EVKKVVG-PKTLKVVLSGGELQGGDIISRAAVAALEGGADFLQTSS-GLGATHATMFTVHLISIALREYMVRENERIRVE 220 (297)
T ss_dssp HHHHHHT-TSEEEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCC-SSSSCCCCHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHhc-CCceEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCC-CCCCCCCCHHHHHHHHHHHHHHhcccccccccc
Confidence 5665554 5678887 2 333 24678899999999874 2111111122333343333211
Q ss_pred --------cCCCcEEEe-cCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 275 --------QGRIPVFLD-GGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 275 --------~~~~~via~-GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+.++.|=++ ||||+.+|+.+++.+... +|..|+
T Consensus 221 ~~~~~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~e---lG~~wl 262 (297)
T 4eiv_A 221 GINREGAAVRCIGIKIEVGDVHMAETADFLMQMIFE---NGPRSI 262 (297)
T ss_dssp ----------CCEEEEECTTCCHHHHHHHHHHHHHH---HCGGGC
T ss_pred ccccccccCCceeEEecCCCCCCHHHHHHHHHHHHH---hCcccc
Confidence 357999999 999999999999995544 444443
No 195
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.31 E-value=0.071 Score=48.20 Aligned_cols=83 Identities=17% Similarity=0.094 Sum_probs=56.2
Q ss_pred HHHHHhhcCCCEE--EEe------c---CCHHHHHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEE
Q 017718 214 WKWLQTITKLPIL--VKG------V---LTAEDARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 214 ~~~l~~~~~~Pv~--vK~------v---~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~vi 281 (367)
++.+|+.+++||+ .|. + .+.+++..+.++|+|.|.+...... .| ...+.+..+.+ . .++++
T Consensus 61 i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~ 133 (229)
T 3q58_A 61 LRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-H--GLLAM 133 (229)
T ss_dssp HHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEE
T ss_pred HHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-C--CCEEE
Confidence 3478888899987 231 1 3467899999999999987532211 12 22334444433 2 45565
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEe
Q 017718 282 LDGGVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lGAd~V~i 305 (367)
+ .+++.+++.++..+|||.|.+
T Consensus 134 ~--~v~t~eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 134 A--DCSTVNEGISCHQKGIEFIGT 155 (229)
T ss_dssp E--ECSSHHHHHHHHHTTCSEEEC
T ss_pred E--ecCCHHHHHHHHhCCCCEEEe
Confidence 5 589999999999999999965
No 196
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=96.28 E-value=0.11 Score=46.79 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=73.5
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHH---HHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV---KATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~---~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
-++++-+-.+.+.+.|..+.++|++.|... =||-.+.+.+....+.+++ +..+-+..|++. +++++.++.++..
T Consensus 102 ~GI~vn~TliFS~~QA~~aa~AGa~~iSpf--vgRidd~g~~G~~~i~~~~~~y~~~~~~t~il~A-S~r~~~~v~~~~l 178 (220)
T 1l6w_A 102 EGIPTLGTAVYGAAQGLLSALAGAEYVAPY--VNRIDAQGGSGIQTVTDLHQLLKMHAPQAKVLAA-SFKTPRQALDCLL 178 (220)
T ss_dssp HTCCEEEEEECSHHHHHHHHHHTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHHCTTCEEEEB-CCSSHHHHHHHHH
T ss_pred CCCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchhhcccccHHHHHHHHHHHHHhcCCCeEEeec-ccCCHHHHHHHHH
Confidence 389999999999999999999999988763 2332223333344444444 333335666765 6999999999999
Q ss_pred cCCCEEEechHHHHHhhccCh--HHHHHHHHHH
Q 017718 298 LGASGIFIGRPVVYSLAAEGE--KGVRRVLEML 328 (367)
Q Consensus 298 lGAd~V~ig~~~l~~l~~~G~--~~v~~~i~~l 328 (367)
+|+|.+-+.-.++..+..++. .+++.+.+.+
T Consensus 179 ~G~d~~Tip~~~l~~l~~h~lt~~~v~~F~~D~ 211 (220)
T 1l6w_A 179 AGCESITLPLDVAQQMISYPAVDAAVAKFEQDW 211 (220)
T ss_dssp TTCSEEEECHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred hCCCeEECCHHHHHHHHcCCChHHHHHHHHHHH
Confidence 999999999888887765442 3444444444
No 197
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.27 E-value=0.01 Score=53.42 Aligned_cols=90 Identities=22% Similarity=0.287 Sum_probs=56.3
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC--CCC---CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHG--ARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g--g~~---~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
.++.+++-. .+.++.+++.+.|.+.|.+.+.- |+. ....+...+...+..+....++||++.|||.+++++.++
T Consensus 110 ~Gl~~iv~v-~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~ 188 (219)
T 2h6r_A 110 LGLETIVCT-NNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAA 188 (219)
T ss_dssp HTCEEEEEE-SSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHH
T ss_pred CCCeEEEEe-CCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHH
Confidence 366555543 33445667777888877774421 221 111111122222222333347999999999999999999
Q ss_pred HHcCCCEEEechHHHH
Q 017718 296 LALGASGIFIGRPVVY 311 (367)
Q Consensus 296 l~lGAd~V~ig~~~l~ 311 (367)
...|||+|.+|++++.
T Consensus 189 ~~~gaDgvlVGsAi~~ 204 (219)
T 2h6r_A 189 LDLGAEGVLLASGVVK 204 (219)
T ss_dssp HTTTCCCEEESHHHHT
T ss_pred hhCCCCEEEEcHHHhC
Confidence 9999999999999885
No 198
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.27 E-value=0.021 Score=55.33 Aligned_cols=84 Identities=23% Similarity=0.274 Sum_probs=62.8
Q ss_pred HHHhhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 216 WLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~-~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
.+++...+|+.+-... +.+.++.+.++|+|.|++....|. .....+.+.++++.+ .+||++ |.+.+.+++.+
T Consensus 89 ~vk~~~~~pvga~ig~~~~e~a~~l~eaGad~I~ld~a~G~----~~~~~~~i~~i~~~~--~~~Viv-g~v~t~e~A~~ 161 (361)
T 3khj_A 89 KVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKE 161 (361)
T ss_dssp HHHHTTCCCCEEEECTTCHHHHHHHHHTTCSEEEECCSCCS----BHHHHHHHHHHHHHC--CCEEEE-EEECSHHHHHH
T ss_pred HHHhccCceEEEEeCCCHHHHHHHHHHcCcCeEEEeCCCCC----cHHHHHHHHHHHHhc--CCcEEE-ccCCCHHHHHH
Confidence 5565567888777653 367899999999999988432221 112346677777766 688887 67899999999
Q ss_pred HHHcCCCEEEec
Q 017718 295 ALALGASGIFIG 306 (367)
Q Consensus 295 al~lGAd~V~ig 306 (367)
+..+|||+|.+|
T Consensus 162 l~~aGaD~I~VG 173 (361)
T 3khj_A 162 LIENGADGIKVG 173 (361)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCcCEEEEe
Confidence 999999999985
No 199
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.21 E-value=0.082 Score=47.86 Aligned_cols=83 Identities=23% Similarity=0.233 Sum_probs=55.9
Q ss_pred HHHHHhhcCCCEEE--Ee------c---CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccc-hHHHHHHHHHHhcCCCcEE
Q 017718 214 WKWLQTITKLPILV--KG------V---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPA-TIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 214 ~~~l~~~~~~Pv~v--K~------v---~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~-~~~~l~~i~~~~~~~~~vi 281 (367)
++.+|+.+++||+- |. + .+.+++..+.++|+|.|.+...... .|. ..+.+..+.+ . .++++
T Consensus 61 i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V~l~~~~~~----~p~~l~~~i~~~~~-~--g~~v~ 133 (232)
T 3igs_A 61 LRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAIIAVDGTARQ----RPVAVEALLARIHH-H--HLLTM 133 (232)
T ss_dssp HHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-T--TCEEE
T ss_pred HHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEEEECccccC----CHHHHHHHHHHHHH-C--CCEEE
Confidence 34788888999862 31 1 3567899999999999987532211 122 2334444432 2 45555
Q ss_pred EecCCCCHHHHHHHHHcCCCEEEe
Q 017718 282 LDGGVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lGAd~V~i 305 (367)
+ .+.+.+++.++..+|||.|.+
T Consensus 134 ~--~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 134 A--DCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp E--ECCSHHHHHHHHHTTCSEEEC
T ss_pred E--eCCCHHHHHHHHhCCCCEEEE
Confidence 5 589999999999999999965
No 200
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=96.20 E-value=0.22 Score=48.19 Aligned_cols=121 Identities=17% Similarity=0.069 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.++||+++-+++++. .+.. .+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~-----~~~~-------------------------------~e---------- 179 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGRG-----EKLD-------------------------------LE---------- 179 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCSC-----HHHH-------------------------------HH----------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCCC-----HHHH-------------------------------HH----------
Confidence 5777788888889999999998877631 0000 00
Q ss_pred cHHHHHhhc-CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 213 SWKWLQTIT-KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 213 ~~~~l~~~~-~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
-.+.+|+.+ ++||.+..- .+.++ ++.+.+.|++.|-- . ..+..++.+.++++.+ ++||++++.
T Consensus 180 ~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEq-------P-~~~~~~~~~~~l~~~~--~iPI~~de~ 249 (384)
T 2pgw_A 180 ITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQ-------P-TVSWSIPAMAHVREKV--GIPIVADQA 249 (384)
T ss_dssp HHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC-------C-SCTTCHHHHHHHHHHC--SSCEEESTT
T ss_pred HHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeC-------C-CChhhHHHHHHHHhhC--CCCEEEeCC
Confidence 123666666 577777643 34444 45677788887751 1 1234678888888877 799999999
Q ss_pred CCCHHHHHHHHHcC-CCEEEechHH
Q 017718 286 VRRGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 286 I~~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+.+..|+.+++..| +|.|++....
T Consensus 250 i~~~~~~~~~i~~~~~d~v~ik~~~ 274 (384)
T 2pgw_A 250 AFTLYDVYEICRQRAADMICIGPRE 274 (384)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECHHH
T ss_pred cCCHHHHHHHHHcCCCCEEEEcchh
Confidence 99999999999986 8999997643
No 201
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=96.15 E-value=0.0043 Score=54.47 Aligned_cols=64 Identities=11% Similarity=0.036 Sum_probs=48.8
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
.++.+.+...|.+-+- -++-..+.+.++ .++|||+.|+|++.+|+.+ +..||++|.-++.-||.
T Consensus 120 ~~~~I~~~kPD~iEiL--------Pg~v~p~~I~~v-----~~~PiIaGGlI~t~edv~~-l~aGA~aIsTs~~~LW~ 183 (188)
T 1vkf_A 120 GIEQIETLGVDVVEVL--------PGAVAPKVARKI-----PGRTVIAAGLVETEEEARE-ILKHVSAISTSSRILWK 183 (188)
T ss_dssp HHHHHHHHTCSEEEEE--------SGGGHHHHHTTS-----TTSEEEEESCCCSHHHHHH-HTTTSSEEEECCHHHHT
T ss_pred hhhhccccCCCeEeec--------CCCchHHHHHHh-----cCCCEEEECCcCCHHHHHH-HHCCCeEEEeCCHHHhC
Confidence 3556667788887762 112123455444 3799999999999999999 99999999999988884
No 202
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.14 E-value=0.021 Score=51.88 Aligned_cols=76 Identities=21% Similarity=0.218 Sum_probs=55.4
Q ss_pred HHHHhhcCCC-EEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 017718 215 KWLQTITKLP-ILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 293 (367)
Q Consensus 215 ~~l~~~~~~P-v~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ 293 (367)
+.+++.++.. +....+.+.++++.+.++|+|+|+.- + .+.+.+..+++ . .+|++. |+.|++++.
T Consensus 77 ~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP---~-------~~~~vi~~~~~-~--gi~~ip--Gv~TptEi~ 141 (232)
T 4e38_A 77 RLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSP---G-------FNPNTVRACQE-I--GIDIVP--GVNNPSTVE 141 (232)
T ss_dssp HHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECS---S-------CCHHHHHHHHH-H--TCEEEC--EECSHHHHH
T ss_pred HHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeC---C-------CCHHHHHHHHH-c--CCCEEc--CCCCHHHHH
Confidence 3677766433 33344588999999999999999642 1 23444444443 2 678877 689999999
Q ss_pred HHHHcCCCEEEe
Q 017718 294 KALALGASGIFI 305 (367)
Q Consensus 294 kal~lGAd~V~i 305 (367)
+|+.+|||.|.+
T Consensus 142 ~A~~~Gad~vK~ 153 (232)
T 4e38_A 142 AALEMGLTTLKF 153 (232)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 999999999987
No 203
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.93 E-value=0.043 Score=50.49 Aligned_cols=72 Identities=21% Similarity=0.212 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.|+...++||++|.|-.-.+ .-....+.|..+++.+ ++||+.-++|.+..++..++++|||+|.++...+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~~~----~f~G~~~~l~~i~~~v--~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~l 139 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTEPH----RFGGSLLDLKRVREAV--DLPLLRKDFVVDPFMLEEARAFGASAALLIVALL 139 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECCCS----SSCCCHHHHHHHHHHC--CSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHHHHHHHcCCCEEEEecchh----hhccCHHHHHHHHHhc--CCCEEECCcCCCHHHHHHHHHcCCCEEEECccch
Confidence 4679999999999999842111 1112455677777777 8999999999999999999999999999998765
No 204
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=95.87 E-value=0.079 Score=50.82 Aligned_cols=119 Identities=17% Similarity=0.224 Sum_probs=84.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++-++++++-. + .+.
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~~~ 176 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYPAL--D--------------------------------------------QDL 176 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCSSH--H--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCH--H--------------------------------------------HHH
Confidence 466777777888889999999887764210 0 000
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
-.+.+|+.+ ++||.++.- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+++
T Consensus 177 e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPI~~d 246 (359)
T 1mdl_A 177 AVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEGVTWIEE--------PTLQHDYEGHQRIQSKL--NVPVQMG 246 (359)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHTCSCEEC--------CSCTTCHHHHHHHHHTC--SSCEEEC
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCeEEC--------CCChhhHHHHHHHHHhC--CCCEEeC
Confidence 122666666 578888754 34444 56677889887631 11234677888887766 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..|+.+++..| +|.|++-.
T Consensus 247 e~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 247 ENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CCCCCHHHHHHHHHcCCCCEEeecc
Confidence 9999999999999986 89999964
No 205
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.0051 Score=56.91 Aligned_cols=67 Identities=16% Similarity=0.130 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.|+...+.|++.+.+-. ++. ...+.+.++.+.+ .+||...|||++- |+.+.+ +||+-|.+|+..+
T Consensus 41 ~~~A~~~~~~Ga~~l~vvD-----L~~--~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~ 107 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIK-----LGP--NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLF 107 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEE-----ESS--SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT-TTCSCEEECGGGB
T ss_pred HHHHHHHHHcCCCEEEEEe-----CCC--CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHH
Confidence 3678999999999988732 111 4677888888776 7999999999986 999999 9999999999765
No 206
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=95.83 E-value=0.1 Score=50.30 Aligned_cols=118 Identities=17% Similarity=0.176 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.+.||+++-+.++++.. + .+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~~~e 179 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDL--K--------------------------------------------EDVD 179 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSH--H--------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCH--H--------------------------------------------HHHH
Confidence 67777788888889999999887764210 0 000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
-.+.+|+.+ +++|.++.- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++
T Consensus 180 ~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~~dE 249 (371)
T 2ovl_A 180 RVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFDLHWIEE--------PTIPDDLVGNARIVRES--GHTIAGGE 249 (371)
T ss_dssp HHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHH--CSCEEECT
T ss_pred HHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCC
Confidence 123666666 578888754 34544 45667788887631 11234677888888877 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEech
Q 017718 285 GVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 285 GI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+.+..|+.+++..| +|.|++..
T Consensus 250 ~~~~~~~~~~~i~~~~~d~v~ik~ 273 (371)
T 2ovl_A 250 NLHTLYDFHNAVRAGSLTLPEPDV 273 (371)
T ss_dssp TCCSHHHHHHHHHHTCCSEECCCT
T ss_pred CCCCHHHHHHHHHcCCCCEEeeCc
Confidence 999999999999986 89999864
No 207
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.81 E-value=0.021 Score=57.31 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=130.9
Q ss_pred ccccceeecccc-CCCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-
Q 017718 42 AFSRILFRPRIL-IDVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA- 118 (367)
Q Consensus 42 ~~~~i~l~pr~l-~~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~- 118 (367)
.||++.|+|... .+.+++|+++.+- ...+..||+.+||...+ +..++.+..+.|-...+.. ..+.++..
T Consensus 13 ~~~d~~~~p~~~~~~p~~v~~~t~lt~~l~~~~Piv~a~M~~vt------~~eLa~av~~~Gg~G~i~~--~~~~e~~~~ 84 (491)
T 1zfj_A 13 TFDDVLLIPAESHVLPNEVDLKTKLADNLTLNIPIITAAMDTVT------GSKMAIAIARAGGLGVIHK--NMSITEQAE 84 (491)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHTTCEEEECC--SSCHHHHHH
T ss_pred ChhhEEeccCcCCcCccccccchhhhhcceecCceEecCchhcc------HHHHHHHHHHcCCceEEeC--CCCHHHHHH
Confidence 699999999776 3447899998875 47899999999997543 4567778888876555532 24444322
Q ss_pred ------hhCC--CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEec--C--CCCCCchhHHhhhhcCCCCccccccccc
Q 017718 119 ------STGP--GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTV--D--TPRLGRREADIKNRFTLPPFLTLKNFQG 186 (367)
Q Consensus 119 ------~~~~--~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itv--d--~p~~g~r~~~~~~~~~~p~~~~~~~~~~ 186 (367)
.... .+..+-+. ......+.++...+.+...+.+.= + ..+.=...+|+.... +.......+..
T Consensus 85 ~i~~v~~~~~im~~~~~~v~---~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--~~~~~v~~im~ 159 (491)
T 1zfj_A 85 EVRKVKRSENGVIIDPFFLT---PEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--DYNAPISEHMT 159 (491)
T ss_dssp HHHHHHHHTTTTSSSCCCBC---SSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--CSSSBTTTSCC
T ss_pred HHHHHhhHHhcCcCCCeEEC---CCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--cCCCcHHHHcC
Confidence 1111 11111121 112345667777777877776532 1 111001123333110 00000000000
Q ss_pred c-ccCccc-cccchhhHHHhhhcc---------Cc----cccHH----HHHh-----hcCCCEEEEecC-----CHHHHH
Q 017718 187 L-DLGKMD-EANDSGLAAYVAGQI---------DR----SLSWK----WLQT-----ITKLPILVKGVL-----TAEDAR 237 (367)
Q Consensus 187 ~-~~~~~~-~~~~~~~~~~~~~~~---------d~----~~~~~----~l~~-----~~~~Pv~vK~v~-----~~~~a~ 237 (367)
. ...... ........+.+.... +. -++.+ .+.+ ....++.+.... ..+.++
T Consensus 160 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~~~~~~d~~~~~~vg~~i~~~~~~~~~a~ 239 (491)
T 1zfj_A 160 SEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAE 239 (491)
T ss_dssp CSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhccccccCcCCcEEEEEeccCchhHHHHHH
Confidence 0 000000 000000111111000 00 11222 2221 001122222221 258899
Q ss_pred HHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 238 IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 238 ~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++|+|.|+++..+|+ ....++.+.++++.++ .+|++ .|+|.+.+++.+++.+|||+|.+|
T Consensus 240 ~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 240 ALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHHcCCCEEEEC
Confidence 999999999999764432 1235677788877663 68998 899999999999999999999887
No 208
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.81 E-value=0.86 Score=42.43 Aligned_cols=179 Identities=13% Similarity=0.144 Sum_probs=103.3
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+ -.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4445666 33333434444666667778876543 3 33456666522 22 22 45666664 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+.. |.. ...+ ..++.+ .++.+.
T Consensus 85 i~la~~A~~~Gadavlv~~--P~y-----------------~~~s-------------~~~l~~----------~f~~ia 122 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS--PYY-----------------NKPT-------------QEGIYQ----------HFKAID 122 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcC--CCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 7889999999999998732 321 0000 001111 234677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHH-cC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQ-AG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~-~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.+++||++=.+ .+++...++.+ .. +-+|.-+. ..+..+.++++..++++.|+ +| +.
T Consensus 123 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~----------gd~~~~~~~~~~~~~~f~v~-~G---~d 188 (292)
T 2vc6_A 123 AASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDAT----------GNLLRPSLERMACGEDFNLL-TG---ED 188 (292)
T ss_dssp HHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------CCTHHHHHHHHHSCTTSEEE-ES---CG
T ss_pred HhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCC----------CCHHHHHHHHHHcCCCEEEE-EC---ch
Confidence 778999998653 57788777766 42 33333221 12334455555555567665 55 34
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
..++.++++||+++.-+.+-
T Consensus 189 ~~~~~~l~~G~~G~is~~~n 208 (292)
T 2vc6_A 189 GTALGYMAHGGHGCISVTAN 208 (292)
T ss_dssp GGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHcCCCEEEecHHH
Confidence 45778899999999888753
No 209
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=95.80 E-value=0.17 Score=45.51 Aligned_cols=94 Identities=21% Similarity=0.151 Sum_probs=68.6
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHH---hcCCCcEEEecCCCCHHHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKA---TQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~---~~~~~~via~GGI~~~~dv~kal~ 297 (367)
-++++-+-.+.+.+.|..+.++|++.|... =||-.+++.+....+.++++. .+-+..|++. +++++.++.++..
T Consensus 109 ~GI~vN~TliFS~~Qa~~aa~AGa~~iSpF--VgRidd~g~~G~~~v~~i~~~~~~~~~~t~vl~A-S~r~~~~v~~~~l 185 (223)
T 1wx0_A 109 EGIKVNMTLIFSANQALLAARAGASYVSPF--LGRVDDISWDGGELLREIVEMIQVQDLPVKVIAA-SIRHPRHVTEAAL 185 (223)
T ss_dssp TTCCEEEEEECSHHHHHHHHHTTCSEEEEB--HHHHHHTTSCHHHHHHHHHHHHHHTTCSCEEEEB-CCCSHHHHHHHHH
T ss_pred CCCcEEEEEeCCHHHHHHHHHCCCeEEEec--cchHhhcCCCHHHHHHHHHHHHHHcCCCeEEeec-ccCCHHHHHHHHH
Confidence 389999999999999999999999987763 233223333344555555443 3335566665 6999999999999
Q ss_pred cCCCEEEechHHHHHhhccC
Q 017718 298 LGASGIFIGRPVVYSLAAEG 317 (367)
Q Consensus 298 lGAd~V~ig~~~l~~l~~~G 317 (367)
+|+|.+-+.-.++..+..++
T Consensus 186 ~G~d~~Tip~~~l~~l~~h~ 205 (223)
T 1wx0_A 186 LGADIATMPHAVFKQLLKHP 205 (223)
T ss_dssp TTCSEEEECHHHHHHHTCCH
T ss_pred hCCCEEECCHHHHHHHHcCC
Confidence 99999999988888775443
No 210
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=95.75 E-value=0.028 Score=54.35 Aligned_cols=68 Identities=19% Similarity=0.050 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++.+.++|+|.|++....|. ....++.+..+++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHHcCCCEEEEc
Confidence 46688999999999988532221 1234567777777653 688887 77999999999999999999985
No 211
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.66 E-value=1.4 Score=41.03 Aligned_cols=179 Identities=16% Similarity=0.155 Sum_probs=103.6
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+. .+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 45567776 5444444444666667778876433 33 3456666522 22 22 35566654 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 122 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVV--VPYY-----------------NKPT-------------QRGLYE----------HFKTVA 122 (294)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999874 2331 0000 001111 234666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHH-HcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~-~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.+++||++=.+ .+++...++. +.. +-+|--+ . ..+..+.++.+..++++.|+ +|. -
T Consensus 123 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds--~--------gd~~~~~~~~~~~~~~f~v~-~G~---d 188 (294)
T 2ehh_A 123 QEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKES--T--------PNMDRISEIVKRLGESFSVL-SGD---D 188 (294)
T ss_dssp HHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC--C--------SCHHHHHHHHHHHCTTSEEE-ESS---G
T ss_pred HhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeC--C--------CCHHHHHHHHHhcCCCeEEE-ECc---H
Confidence 778999998764 5678877776 542 2222221 1 13444555555555566654 452 3
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
.-++.++.+||+++.-+..-
T Consensus 189 ~~~~~~l~~G~~G~is~~an 208 (294)
T 2ehh_A 189 SLTLPMMALGAKGVISVANN 208 (294)
T ss_dssp GGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHCCCCEEEeCHHH
Confidence 34678899999999988753
No 212
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.66 E-value=0.033 Score=52.65 Aligned_cols=72 Identities=29% Similarity=0.256 Sum_probs=50.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh-c-CCCc-EEEecCCCCHH----HHHHHHHcCCCEEEech
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-Q-GRIP-VFLDGGVRRGT----DVFKALALGASGIFIGR 307 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~-~-~~~~-via~GGI~~~~----dv~kal~lGAd~V~ig~ 307 (367)
.++.+.+.|+|.+-+.- . .+ +...++.+.++.+.. . ..+| |++.||+ +.+ .+..++..||++|.+||
T Consensus 182 aa~~a~~lGaD~iKv~~--~--~~-~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~~a~~aGa~Gv~vGR 255 (304)
T 1to3_A 182 AAKELGDSGADLYKVEM--P--LY-GKGARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVRVAMEAGASGFLAGR 255 (304)
T ss_dssp HHHHHTTSSCSEEEECC--G--GG-GCSCHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHHHHHHTTCCEEEESH
T ss_pred HHHHHHHcCCCEEEeCC--C--cC-CCCCHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHHHHHHcCCeEEEEeh
Confidence 37888899999998832 1 01 111455555665551 1 1789 9999999 553 47778889999999999
Q ss_pred HHHHH
Q 017718 308 PVVYS 312 (367)
Q Consensus 308 ~~l~~ 312 (367)
.+...
T Consensus 256 aI~q~ 260 (304)
T 1to3_A 256 AVWSS 260 (304)
T ss_dssp HHHGG
T ss_pred HHhCc
Confidence 88753
No 213
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.61 E-value=0.039 Score=51.77 Aligned_cols=91 Identities=22% Similarity=0.353 Sum_probs=57.8
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. ...+++..+++.+.+++|||+--|-.+-.++++ +-.+|||++++-.|++
T Consensus 29 v~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 108 (292)
T 3daq_A 29 VNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY 108 (292)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999999765442111111 123455666666677999999656556666654 3447999999999987
Q ss_pred HHhhccChHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLR 329 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~ 329 (367)
+.. .++++.++++.+.
T Consensus 109 ~~~---~~~~l~~~f~~ia 124 (292)
T 3daq_A 109 NKT---NQRGLVKHFEAIA 124 (292)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 632 3455555544443
No 214
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.53 E-value=0.061 Score=50.69 Aligned_cols=90 Identities=14% Similarity=0.231 Sum_probs=56.4
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+.
T Consensus 43 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 43 AAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp HHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 56678899999999765442211111 133455666666677899987545445555543 3347999999999986
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 123 ~~~---~~~~l~~~f~~i 137 (304)
T 3cpr_A 123 SKP---SQEGLLAHFGAI 137 (304)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 532 345555444444
No 215
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.44 E-value=0.049 Score=51.03 Aligned_cols=90 Identities=14% Similarity=0.303 Sum_probs=56.6
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3tak_A 28 VEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYY 107 (291)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 35677899999999665442111111 123455566666677899998555555666554 4458999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 108 ~~~---~~~~l~~~f~~i 122 (291)
T 3tak_A 108 NKP---TQEGLYQHYKAI 122 (291)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345554444444
No 216
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.43 E-value=0.16 Score=45.48 Aligned_cols=84 Identities=17% Similarity=0.107 Sum_probs=56.9
Q ss_pred HHHhhcCCCEEE--E-e-------c-CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 216 WLQTITKLPILV--K-G-------V-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 216 ~l~~~~~~Pv~v--K-~-------v-~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
.+|+.+++|++- | . + .+.+.++.+.++|+|.|.++..-....+ +....+.+.++++..+ .++|+.
T Consensus 63 ~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~-~~~v~~-- 138 (234)
T 1yxy_A 63 EIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYP-NQLLMA-- 138 (234)
T ss_dssp HHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCT-TCEEEE--
T ss_pred HHHHhCCCCEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCC-CCeEEE--
Confidence 566667888741 1 1 1 2457899999999999988542211111 1234667777777653 455554
Q ss_pred CCCCHHHHHHHHHcCCCEE
Q 017718 285 GVRRGTDVFKALALGASGI 303 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V 303 (367)
++++.+++.++..+|||.|
T Consensus 139 ~~~t~~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 139 DISTFDEGLVAHQAGIDFV 157 (234)
T ss_dssp ECSSHHHHHHHHHTTCSEE
T ss_pred eCCCHHHHHHHHHcCCCEE
Confidence 6889999999999999999
No 217
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.40 E-value=0.055 Score=50.81 Aligned_cols=90 Identities=18% Similarity=0.269 Sum_probs=56.3
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 34 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 113 (297)
T 3flu_A 34 IDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYY 113 (297)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45677899999999765442111111 123455666666777999998555455555553 3348999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 114 ~~~---~~~~l~~~f~~v 128 (297)
T 3flu_A 114 NKP---SQEGIYQHFKTI 128 (297)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345544444443
No 218
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.39 E-value=0.08 Score=49.20 Aligned_cols=72 Identities=21% Similarity=0.129 Sum_probs=56.9
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
.+.|+...++||++|.|-.-.+ ... ...+.|.++++.+ ++||+.-..|.+..++.++..+|||+|.++...+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~--~f~--Gs~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTP--SFQ--GAPEFLTAARQAC--SLPALRKDFLFDPYQVYEARSWGADCILIIMASV 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCST--TTC--CCHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS
T ss_pred HHHHHHHHHCCCCEEEEecccc--ccC--CCHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHHcCCCEEEEccccc
Confidence 3668999999999998843221 111 2556777787766 8999999999999999999999999999997654
No 219
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.37 E-value=0.055 Score=48.79 Aligned_cols=114 Identities=18% Similarity=0.240 Sum_probs=76.6
Q ss_pred EeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhcc
Q 017718 129 LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI 208 (367)
Q Consensus 129 Ly~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (367)
+....+.+...++++.+.+.|++.+-++...+.. .+
T Consensus 22 vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~--------------------------------------~~------ 57 (224)
T 1vhc_A 22 VIALDNADDILPLADTLAKNGLSVAEITFRSEAA--------------------------------------AD------ 57 (224)
T ss_dssp EECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTH--------------------------------------HH------
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchH--------------------------------------HH------
Confidence 3335666777788888899999998886542210 00
Q ss_pred CccccHHHHHhhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 209 DRSLSWKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 209 d~~~~~~~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.++.+++.++ +-+....+.+.++++.+.++|+|+++.. + ...+++...++ . ..+++. |+.
T Consensus 58 ----~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p---~-------~d~~v~~~ar~-~--g~~~i~--Gv~ 118 (224)
T 1vhc_A 58 ----AIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTP---G-------LNPKIVKLCQD-L--NFPITP--GVN 118 (224)
T ss_dssp ----HHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECS---S-------CCHHHHHHHHH-T--TCCEEC--EEC
T ss_pred ----HHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEEC---C-------CCHHHHHHHHH-h--CCCEEe--ccC
Confidence 1224555553 3344444567899999999999999541 1 12334444443 4 456665 499
Q ss_pred CHHHHHHHHHcCCCEEEe
Q 017718 288 RGTDVFKALALGASGIFI 305 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~i 305 (367)
|++++.+++.+|||.|.+
T Consensus 119 t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 119 NPMAIEIALEMGISAVKF 136 (224)
T ss_dssp SHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHCCCCEEEE
Confidence 999999999999999998
No 220
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.35 E-value=0.056 Score=50.89 Aligned_cols=89 Identities=15% Similarity=0.297 Sum_probs=54.8
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 39 VNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46678899999999665442111111 123455556666677899997545444455543 3347999999999986
Q ss_pred HHhhccChHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~ 327 (367)
+.. .++++.++++.
T Consensus 119 ~~~---s~~~l~~~f~~ 132 (301)
T 1xky_A 119 NKP---SQEGMYQHFKA 132 (301)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 532 34544444443
No 221
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.33 E-value=0.055 Score=50.72 Aligned_cols=91 Identities=11% Similarity=0.158 Sum_probs=56.8
Q ss_pred HHHHHH-cCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHH
Q 017718 236 ARIAVQ-AGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 309 (367)
Q Consensus 236 a~~~~~-~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~ 309 (367)
++.+.+ .|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+
T Consensus 30 v~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 109 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPF 109 (293)
T ss_dssp HHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 456778 99999999665442111111 133455666666777899998555555555553 334799999999998
Q ss_pred HHHhhccChHHHHHHHHHHH
Q 017718 310 VYSLAAEGEKGVRRVLEMLR 329 (367)
Q Consensus 310 l~~l~~~G~~~v~~~i~~l~ 329 (367)
++.. .++++.++++.+.
T Consensus 110 y~~~---~~~~l~~~f~~va 126 (293)
T 1f6k_A 110 YYKF---SFPEIKHYYDTII 126 (293)
T ss_dssp SSCC---CHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHH
Confidence 7532 3455555554443
No 222
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.30 E-value=0.045 Score=51.95 Aligned_cols=90 Identities=14% Similarity=0.246 Sum_probs=57.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 49 i~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 128 (315)
T 3si9_A 49 VEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY 128 (315)
T ss_dssp HHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678999999998665442111111 123455666666777899998555556666554 4458999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 129 ~~~---~~~~l~~~f~~v 143 (315)
T 3si9_A 129 NRP---NQRGLYTHFSSI 143 (315)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345554444443
No 223
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=95.30 E-value=0.027 Score=51.00 Aligned_cols=82 Identities=17% Similarity=0.160 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEEechHHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+-++.+.+.|++|++++. ...+.+.++++..+.+.++ .++||+-. .+. +++..|||.+.+||+++.+
T Consensus 141 ~~a~~a~~~G~~GvV~~a----------t~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~aGad~iVvGr~I~~a 208 (228)
T 3m47_A 141 EIARMGVDLGVKNYVGPS----------TRPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETLRFADAIIVGRSIYLA 208 (228)
T ss_dssp HHHHHHHHTTCCEEECCS----------SCHHHHHHHHHHHCSSSEE-EECC----------CGGGTCSEEEECHHHHTS
T ss_pred HHHHHHHHhCCcEEEECC----------CChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHHcCCCEEEECHHHhCC
Confidence 346788899999998743 1234556677766544655 77888643 367 8889999999999997532
Q ss_pred hhccChHHHHHHHHHHHHHHH
Q 017718 313 LAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 313 l~~~G~~~v~~~i~~l~~el~ 333 (367)
..+ ...++.++++++
T Consensus 209 ---~dp---~~a~~~~~~~~~ 223 (228)
T 3m47_A 209 ---DNP---AAAAAGAIESIK 223 (228)
T ss_dssp ---SCH---HHHHHHHHHHC-
T ss_pred ---CCH---HHHHHHHHHHHH
Confidence 122 234555655554
No 224
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.30 E-value=0.085 Score=51.10 Aligned_cols=85 Identities=14% Similarity=0.177 Sum_probs=59.5
Q ss_pred HHHhhcCCCEEEEec---CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 216 WLQTITKLPILVKGV---LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v---~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+|+.-.+++.+-.. ...+.++.+.++|+|.|++....|. .....+.+.++++..+ +++|++ |.+.+.+++
T Consensus 90 ~vk~~~~l~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~----~~~~~~~I~~ik~~~p-~v~Vi~-G~v~t~e~A 163 (366)
T 4fo4_A 90 QVKISGGLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGH----SEGVLQRIRETRAAYP-HLEIIG-GNVATAEGA 163 (366)
T ss_dssp HHHTTTSCCCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTT----SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHH
T ss_pred HHHhcCceeEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCC----CHHHHHHHHHHHHhcC-CCceEe-eeeCCHHHH
Confidence 455433445544432 2468899999999999998533331 1234566777777653 577776 679999999
Q ss_pred HHHHHcCCCEEEec
Q 017718 293 FKALALGASGIFIG 306 (367)
Q Consensus 293 ~kal~lGAd~V~ig 306 (367)
.++..+|||+|.+|
T Consensus 164 ~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 164 RALIEAGVSAVKVG 177 (366)
T ss_dssp HHHHHHTCSEEEEC
T ss_pred HHHHHcCCCEEEEe
Confidence 99999999999995
No 225
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.29 E-value=0.063 Score=50.58 Aligned_cols=93 Identities=15% Similarity=0.198 Sum_probs=58.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 38 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 38 VQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 46678899999999665442111111 123455666666677899998444444455543 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLREE 331 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~e 331 (367)
+.. .++++.++++.+.+.
T Consensus 118 ~~~---s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 118 YPF---SFEEHCDHYRAIIDS 135 (303)
T ss_dssp SCC---CHHHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHHHh
Confidence 632 456666665555443
No 226
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=95.25 E-value=1 Score=41.40 Aligned_cols=87 Identities=23% Similarity=0.389 Sum_probs=54.7
Q ss_pred cCCCEEEEecC--CHHHHH----HHHHcCCcEEEEcCCCCCCCC-Cc--cchHHHHHHHHHHhcCCCcEEEecCCCCHH-
Q 017718 221 TKLPILVKGVL--TAEDAR----IAVQAGAAGIIVSNHGARQLD-YV--PATIMALEEVVKATQGRIPVFLDGGVRRGT- 290 (367)
Q Consensus 221 ~~~Pv~vK~v~--~~~~a~----~~~~~G~d~i~vs~~gg~~~~-~~--~~~~~~l~~i~~~~~~~~~via~GGI~~~~- 290 (367)
+++||++|..+ ++++.. .+...|.+-+++--.|++... .. ...+..++.+++.. .+||+++..=.++.
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~--~~pVi~d~sH~~g~~ 206 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELS--HLPIIVDPSHPAGRR 206 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECSSTTTCSG
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhh--CCCEEEEcCCCCCcc
Confidence 68999999875 566644 445678765665444544331 11 12345666666654 68998865433332
Q ss_pred ----H-HHHHHHcCCCEEEechHH
Q 017718 291 ----D-VFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 ----d-v~kal~lGAd~V~ig~~~ 309 (367)
. +..+.++||++++|=+-+
T Consensus 207 ~~v~~~~~aAva~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 207 SLVIPLAKAAYAIGADGIMVEVHP 230 (262)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred chHHHHHHHHHHcCCCEEEEEecC
Confidence 3 344677999999999854
No 227
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.22 E-value=0.055 Score=51.30 Aligned_cols=90 Identities=19% Similarity=0.302 Sum_probs=56.7
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+.
T Consensus 50 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y 129 (314)
T 3qze_A 50 VDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYY 129 (314)
T ss_dssp HHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45678899999999665442111111 123455556666777899998555555666554 3348999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 130 ~~~---s~~~l~~~f~~v 144 (314)
T 3qze_A 130 NKP---TQEGMYQHFRHI 144 (314)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345554444443
No 228
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=95.22 E-value=1.4 Score=42.71 Aligned_cols=124 Identities=13% Similarity=0.020 Sum_probs=85.7
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+.+.+.+.++++.+.||+++-+.. +|+.+.-+ +.+
T Consensus 143 ~~~~~~~~~~a~~~~~~Gf~~iKik~-spvG~~~~------------------------------------------~~~ 179 (401)
T 2hzg_A 143 GDTPQETLERARAARRDGFAAVKFGW-GPIGRGTV------------------------------------------AAD 179 (401)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEES-TTTTSSCH------------------------------------------HHH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEcC-CCCCCCHH------------------------------------------HHH
Confidence 45788788888888899999998875 44311000 000
Q ss_pred c-cHHHHHhhc--CCCEEEEec--C--CHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHH-HhcCCCc
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--L--TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVK-ATQGRIP 279 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~-~~~~~~~ 279 (367)
. -.+.+|+.+ +++|.++.- . +.++ ++.+.+.|++.|-- ...+..++.+.++++ .+ ++|
T Consensus 180 ~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~--~iP 249 (401)
T 2hzg_A 180 ADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEE--------PFDAGALAAHAALAGRGA--RVR 249 (401)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHTTCC--SSE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHhhCC--CCC
Confidence 1 123666666 578888754 4 6555 56678889887641 112346777777766 55 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEechH
Q 017718 280 VFLDGGVRRGTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 280 via~GGI~~~~dv~kal~lG-Ad~V~ig~~ 308 (367)
|++++.+.+..++.+++..| +|.|++-..
T Consensus 250 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 279 (401)
T 2hzg_A 250 IAGGEAAHNFHMAQHLMDYGRIGFIQIDCG 279 (401)
T ss_dssp EEECTTCSSHHHHHHHHHHSCCSEEEECHH
T ss_pred EEecCCcCCHHHHHHHHHCCCCCEEEeCcc
Confidence 99999999999999999976 899999643
No 229
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.22 E-value=0.065 Score=50.08 Aligned_cols=90 Identities=18% Similarity=0.321 Sum_probs=55.4
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 27 INFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678899999999665442111111 133455666666677899987544444455543 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~i 121 (289)
T 2yxg_A 107 NKP---TQEGLRKHFGKV 121 (289)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 532 345544444443
No 230
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.22 E-value=0.053 Score=51.17 Aligned_cols=89 Identities=21% Similarity=0.308 Sum_probs=56.1
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. ...+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+.
T Consensus 42 v~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 121 (304)
T 3l21_A 42 ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY 121 (304)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 46678899999999765442111111 133455666666777999999555555566554 3347999999999987
Q ss_pred HHhhccChHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~ 327 (367)
+.. .++++.++++.
T Consensus 122 ~~~---s~~~l~~~f~~ 135 (304)
T 3l21_A 122 SKP---PQRGLQAHFTA 135 (304)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 632 34444444433
No 231
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.19 E-value=0.11 Score=48.36 Aligned_cols=70 Identities=20% Similarity=0.173 Sum_probs=55.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
+.|+...+.||++|.|-.-.+ .-....+.|.++++.+ ++||+.-+.|.+..++..+.++|||+|.++.+.
T Consensus 76 ~~A~~y~~~GA~~isvltd~~----~f~Gs~~~l~~ir~~v--~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~ 145 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQR----RFQGSLDDLDAVRASV--SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA 145 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGG----GHHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEecChh----hcCCCHHHHHHHHHhC--CCCEEECccccCHHHHHHHHHcCCCEEEEeccc
Confidence 568889999999999842110 1123567788888777 899999999999999999999999999997643
No 232
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.15 E-value=0.049 Score=51.70 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=56.8
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 51 v~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 130 (315)
T 3na8_A 51 IERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISY 130 (315)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678999999999665442111111 133455666666677899998555455556554 3458999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 131 ~~~---s~~~l~~~f~~v 145 (315)
T 3na8_A 131 WKL---NEAEVFQHYRAV 145 (315)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345544444443
No 233
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=95.15 E-value=0.45 Score=42.78 Aligned_cols=126 Identities=16% Similarity=0.196 Sum_probs=78.7
Q ss_pred eecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccC
Q 017718 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (367)
Q Consensus 130 y~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (367)
|...+-+.+.+-++.++++|++.+++.+-.+ |
T Consensus 70 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 101 (224)
T 2bdq_A 70 YNDLELRIMEEDILRAVELESDALVLGILTS------------------------------------------------N 101 (224)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 5444567788888899999999999855332 1
Q ss_pred ccccHH---HHHh-hcCCCEEEEec------CCH-HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCC
Q 017718 210 RSLSWK---WLQT-ITKLPILVKGV------LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRI 278 (367)
Q Consensus 210 ~~~~~~---~l~~-~~~~Pv~vK~v------~~~-~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~ 278 (367)
..++++ .|.+ .-++|+.+=-. .++ +..+.+.+.|++.|-.|| +..-.....-.+.|.++.+...+++
T Consensus 102 g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rILTSG--~~~~~~a~~g~~~L~~Lv~~a~~ri 179 (224)
T 2bdq_A 102 NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRILLHG--SSNGEPIIENIKHIKALVEYANNRI 179 (224)
T ss_dssp SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEEECS--CSSCCCGGGGHHHHHHHHHHHTTSS
T ss_pred CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEECCC--CCCCCcHHHHHHHHHHHHHhhCCCe
Confidence 122222 2212 22566655332 233 346788999999998754 4221123445667777766656689
Q ss_pred cEEEecCCCCHHHHHHHH-HcCCCEEEec
Q 017718 279 PVFLDGGVRRGTDVFKAL-ALGASGIFIG 306 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal-~lGAd~V~ig 306 (367)
.|++-|||+. +.+.+.+ .+|++.+=..
T Consensus 180 ~Im~GgGV~~-~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 180 EIMVGGGVTA-ENYQYICQETGVKQAHGT 207 (224)
T ss_dssp EEEECSSCCT-TTHHHHHHHHTCCEEEET
T ss_pred EEEeCCCCCH-HHHHHHHHhhCCCEEccc
Confidence 8999889864 4455555 4799988754
No 234
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.15 E-value=2.1 Score=39.90 Aligned_cols=180 Identities=17% Similarity=0.150 Sum_probs=103.4
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ + +..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 4456676433323333334666666778876433 3 33455666522 21 22 35666654 4566777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 92 i~la~~a~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~va 129 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSV--VPYY-----------------NKPS-------------QEGIYQ----------HFKTIA 129 (297)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 889999999999999873 2321 0000 001111 124677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|--+ ...+..+.++.+..++++.|+ +| +..
T Consensus 130 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKds----------sgd~~~~~~~~~~~~~~f~v~-~G---~d~ 195 (297)
T 3flu_A 130 EATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEA----------SGNIGSNIELINRAPEGFVVL-SG---DDH 195 (297)
T ss_dssp HHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEEC----------SCCHHHHHHHHHHSCTTCEEE-EC---CGG
T ss_pred HhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeC----------CCCHHHHHHHHHhcCCCeEEE-EC---cHH
Confidence 778999998875 5677777776432 1122211 123455556666665566664 45 234
Q ss_pred HHHHHHHcCCCEEEechHH
Q 017718 291 DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~ 309 (367)
-++.++++||+++.-+..-
T Consensus 196 ~~l~~l~~G~~G~is~~an 214 (297)
T 3flu_A 196 TALPFMLCGGHGVITVAAN 214 (297)
T ss_dssp GHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHhCCCCEEEechHh
Confidence 5778899999999888743
No 235
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=95.14 E-value=0.35 Score=46.61 Aligned_cols=124 Identities=13% Similarity=0.144 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.|++++-+.++++..+ + .+ +...
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~---------~-~~--------------------------------~~~~ 185 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVS---------W-AP--------------------------------DVKM 185 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTST---------T-CC--------------------------------CHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccc---------c-cc--------------------------------chHH
Confidence 4677777888888899999999988764311 0 00 0011
Q ss_pred c---HHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 213 S---WKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 ~---~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
+ .+.+|+.. +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+
T Consensus 186 ~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa 255 (382)
T 1rvk_A 186 DLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKLGFDWIEE--------PMDEQSLSSYKWLSDNL--DIPVV 255 (382)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHhhC--CCCEE
Confidence 1 23677766 588888754 34544 45667788887641 11234677888888776 79999
Q ss_pred EecCCCC-HHHHHHHHHcC-CCEEEechH
Q 017718 282 LDGGVRR-GTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 282 a~GGI~~-~~dv~kal~lG-Ad~V~ig~~ 308 (367)
+++.+.+ ..++.+++..| +|.|++--.
T Consensus 256 ~dE~~~~~~~~~~~~i~~~~~d~v~ik~~ 284 (382)
T 1rvk_A 256 GPESAAGKHWHRAEWIKAGACDILRTGVN 284 (382)
T ss_dssp ECSSCSSHHHHHHHHHHTTCCSEEEECHH
T ss_pred EeCCccCcHHHHHHHHHcCCCCEEeeCch
Confidence 9999999 99999999987 899998653
No 236
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.12 E-value=2.1 Score=39.91 Aligned_cols=182 Identities=18% Similarity=0.228 Sum_probs=103.3
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|-++.|+.-.+-.+.+.-..+.+-..+.|+...+ || ..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 4455666432223333334666666778876443 33 3456666522 22 22 45666654 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+.. |.. ...+ ..++.+ .++.+.
T Consensus 97 i~la~~A~~~Gadavlv~~--P~y-----------------~~~s-------------~~~l~~----------~f~~va 134 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA--PYY-----------------NKPS-------------QEGMYQ----------HFKAIA 134 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC--CCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcC--CCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 7889999999999998732 321 0000 001111 123666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|.-+. ..+..+.++.+..++++.| .+|. -.
T Consensus 135 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdss----------gd~~~~~~~~~~~~~~f~v-~~G~---d~ 200 (301)
T 1xky_A 135 ESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDAG----------GDVLTMTEIIEKTADDFAV-YSGD---DG 200 (301)
T ss_dssp HTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECS----------SCHHHHHHHHHHSCTTCEE-EESS---GG
T ss_pred HhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcCC----------CCHHHHHHHHHhcCCCeEE-EECc---HH
Confidence 778999998764 5678777776542 22222211 1344555666655545655 4452 34
Q ss_pred HHHHHHHcCCCEEEechHHHH
Q 017718 291 DVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l~ 311 (367)
-++.++.+||+++.-+..-++
T Consensus 201 ~~l~~l~~G~~G~is~~an~~ 221 (301)
T 1xky_A 201 LTLPAMAVGAKGIVSVASHVI 221 (301)
T ss_dssp GHHHHHHTTCCEEEESTHHHH
T ss_pred HHHHHHHcCCCEEEcCHHHhC
Confidence 477889999999999886554
No 237
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.12 E-value=0.056 Score=49.88 Aligned_cols=37 Identities=24% Similarity=0.564 Sum_probs=31.4
Q ss_pred HHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEcC
Q 017718 215 KWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVSN 251 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~-v~~~~~a~~~~~~G~d~i~vs~ 251 (367)
+++++..++||++.+ +.+++++..+.++|+|+++|..
T Consensus 171 ~~i~~~~~iPviv~gGI~t~eda~~~~~~GAdgViVGS 208 (264)
T 1xm3_A 171 SFIIEQAKVPVIVDAGIGSPKDAAYAMELGADGVLLNT 208 (264)
T ss_dssp HHHHHHCSSCBEEESCCCSHHHHHHHHHTTCSEEEESH
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcH
Confidence 377777899999985 5679999999999999999943
No 238
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=95.12 E-value=2.1 Score=39.75 Aligned_cols=181 Identities=18% Similarity=0.183 Sum_probs=103.0
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|-++.|+.-.+-.+.+.-..+.+-.-+.|+...+ +| ..+.+.+|-. +. .. -+.+...- ..+-+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4456676433333333334666666677876433 32 3445666532 22 22 35666654 3466777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~ia 123 (291)
T 3tak_A 86 IELTKAAKDLGADAALLV--TPYY-----------------NKPT-------------QEGLYQ----------HYKAIA 123 (291)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999873 2321 0000 001111 234677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
+.+++||++=.+ .+++...++.+.. ..+-+= +. ...+..+.++.+..++++.|+ +| +..-
T Consensus 124 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK-------~s-sgd~~~~~~~~~~~~~~f~v~-~G---~d~~ 190 (291)
T 3tak_A 124 EAVELPLILYNVPGRTGVDLSNDTAVRLAEIP-NIVGIK-------DA-TGDVPRGKALIDALNGKMAVY-SG---DDET 190 (291)
T ss_dssp HHCCSCEEEEECHHHHSCCCCHHHHHHHTTST-TEEEEE-------EC-SCCHHHHHHHHHHHTTSSEEE-EC---CHHH
T ss_pred HhcCCCEEEEecccccCCCCCHHHHHHHHcCC-CEEEEE-------eC-CCCHHHHHHHHHHcCCCeEEE-EC---cHHH
Confidence 778999998865 5677777776532 222121 11 123444555655555567664 45 2455
Q ss_pred HHHHHHcCCCEEEechHH
Q 017718 292 VFKALALGASGIFIGRPV 309 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~ 309 (367)
.+.++++||+++.-+..-
T Consensus 191 ~~~~l~~G~~G~is~~~n 208 (291)
T 3tak_A 191 AWELMLLGADGNISVTAN 208 (291)
T ss_dssp HHHHHHTTCCEEEESGGG
T ss_pred HHHHHHCCCCEEEechhh
Confidence 778899999999888743
No 239
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.11 E-value=1.6 Score=40.95 Aligned_cols=179 Identities=20% Similarity=0.218 Sum_probs=102.2
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCcee--ec---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+. .+-.+.+.-..+.+-..+.|+... .| +..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 19 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~a 96 (306)
T 1o5k_A 19 TAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKT 96 (306)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHH
Confidence 45567775 544444444466776777887543 23 33556766522 22 22 35666654 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 97 i~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 134 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVV--TPYY-----------------NKPT-------------QEGLYQ----------HYKYIS 134 (306)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999874 2321 0000 001111 123666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHH-HcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC---CCcEEEecCC
Q 017718 219 TITKLPILVKGV-------LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG---RIPVFLDGGV 286 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~-~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~---~~~via~GGI 286 (367)
+.+++||++=.+ .+++...++. +.. +-+|--+. ..+..+.++.+..++ ++.| .+|-
T Consensus 135 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdss----------gd~~~~~~~~~~~~~~~~~f~v-~~G~- 202 (306)
T 1o5k_A 135 ERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEAN----------PDIDQIDRTVSLTKQARSDFMV-WSGN- 202 (306)
T ss_dssp TTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECC----------CCHHHHHHHHHHHHHHCTTCEE-EESS-
T ss_pred HhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCC----------CCHHHHHHHHHhcCCCCCcEEE-EECc-
Confidence 778999998764 5678777776 542 22222221 123344444444433 4555 4452
Q ss_pred CCHHHHHHHHHcCCCEEEechHH
Q 017718 287 RRGTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~ 309 (367)
..-++.++.+||+++.-+..-
T Consensus 203 --d~~~l~~l~~G~~G~is~~an 223 (306)
T 1o5k_A 203 --DDRTFYLLCAGGDGVISVVSN 223 (306)
T ss_dssp --GGGHHHHHHHTCCEEEESGGG
T ss_pred --HHHHHHHHHCCCCEEEecHHH
Confidence 344778899999999988743
No 240
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.11 E-value=0.069 Score=47.78 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=77.6
Q ss_pred EEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhh
Q 017718 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (367)
Q Consensus 127 ~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (367)
+-+....+.+...+.++.+.+.|++.+-++...+.. .+
T Consensus 19 i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~--------------------------------------~~---- 56 (214)
T 1wbh_A 19 VPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECA--------------------------------------VD---- 56 (214)
T ss_dssp EEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTH--------------------------------------HH----
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhH--------------------------------------HH----
Confidence 334445677777788888999999998887543210 00
Q ss_pred ccCccccHHHHHhhcC-CCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 207 QIDRSLSWKWLQTITK-LPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 207 ~~d~~~~~~~l~~~~~-~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
.++.+++.++ +-+....+.+.++++.+.++|+|+++.. + .+.+.+ +.++.. .++++. |
T Consensus 57 ------~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v~~p---~-------~d~~v~-~~~~~~--g~~~i~--G 115 (214)
T 1wbh_A 57 ------AIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISP---G-------LTEPLL-KAATEG--TIPLIP--G 115 (214)
T ss_dssp ------HHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCEEES---S-------CCHHHH-HHHHHS--SSCEEE--E
T ss_pred ------HHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEEEcC---C-------CCHHHH-HHHHHh--CCCEEE--e
Confidence 1224555553 3344444577899999999999999752 1 122333 233333 577776 4
Q ss_pred CCCHHHHHHHHHcCCCEEEe
Q 017718 286 VRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~i 305 (367)
+.|++++.+++.+|||.|.+
T Consensus 116 ~~t~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 116 ISTVSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ESSHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHHHHHHCCCCEEEE
Confidence 99999999999999999998
No 241
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.11 E-value=0.065 Score=50.23 Aligned_cols=90 Identities=20% Similarity=0.275 Sum_probs=55.3
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 27 IEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp HHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678899999999765442111111 133455666666667899998555445555543 3347999999999986
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~v 121 (294)
T 2ehh_A 107 NKP---TQRGLYEHFKTV 121 (294)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 532 344444444433
No 242
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.10 E-value=0.067 Score=50.57 Aligned_cols=93 Identities=15% Similarity=0.174 Sum_probs=55.1
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+.
T Consensus 35 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 35 VDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 45678899999999665442111111 123455666666677999998645445555543 3347999999999975
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+....-.++++.++++.+
T Consensus 115 ~~~~~~s~~~l~~~f~~v 132 (309)
T 3fkr_A 115 GATFRVPEAQIFEFYARV 132 (309)
T ss_dssp TTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHH
Confidence 210011345554444443
No 243
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.10 E-value=0.066 Score=51.17 Aligned_cols=90 Identities=13% Similarity=0.103 Sum_probs=55.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||+|++-.|++
T Consensus 61 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 140 (332)
T 2r8w_A 61 IARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY 140 (332)
T ss_dssp HHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45678899999999765442111111 133455666666677899997444444444443 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 141 ~~~---s~~~l~~~f~~V 155 (332)
T 2r8w_A 141 TPL---TQEEAYHHFAAV 155 (332)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 532 345555444444
No 244
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=95.05 E-value=0.4 Score=46.06 Aligned_cols=268 Identities=18% Similarity=0.195 Sum_probs=136.3
Q ss_pred ccccCCCCchhhH-HHhHhccccceeeccccC-------CCCCCccceeEcCeee--ccceEeCcccchhccCChhhHHH
Q 017718 24 DYYASGAEDQWTL-QENRNAFSRILFRPRILI-------DVSKIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYAT 93 (367)
Q Consensus 24 ~y~~~ga~~~~t~-~~n~~~~~~i~l~pr~l~-------~~~~vd~st~i~g~~l--~~Pi~iAPm~~~~l~~~~~e~~~ 93 (367)
..+-|-.||+..+ ....+++.-+.=+-|+.. ....-++.+++.+..+ ..|++||-.+. ....+.-..+
T Consensus 48 ~~~ig~~g~~~~~~~~~~~~~~~v~~~~~i~~~~k~~sr~~~~~~~~i~i~~~~iG~~~~~vIAgpcs--~es~e~a~~~ 125 (350)
T 1vr6_A 48 RTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCS--VEGREMLMET 125 (350)
T ss_dssp CEEEEEEEEESSCCHHHHHTSTTEEEEEECSCSCCTTBTTTCCSCCCEECSSCEESTTEEEEEEECSB--CCCHHHHHHH
T ss_pred eEEEEEECCcCcCCHHHhhCCccceeeccCCCChhhhhhhcCCcCCEEEECCEEECCCCeEEEEeCCC--cCCHHHHHHH
Confidence 4455666776665 344555555544444442 2334456666655444 23777775533 2223334579
Q ss_pred HHHHHHcCCceee-cCCCCCCHHHHHhhCCCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhh
Q 017718 94 ARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNR 172 (367)
Q Consensus 94 a~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~ 172 (367)
++.++++|..++- ..+...+ .++.||- -..+....+.+.+++.|...+. ++--+. .-+....
T Consensus 126 a~~~k~aGa~~vr~q~fKprT---------s~~~f~g---lg~egl~~l~~~~~e~Gl~~~t-e~~d~~----~~~~l~~ 188 (350)
T 1vr6_A 126 AHFLSELGVKVLRGGAYKPRT---------SPYSFQG---LGEKGLEYLREAADKYGMYVVT-EALGED----DLPKVAE 188 (350)
T ss_dssp HHHHHHTTCCEEECBSCCCCC---------STTSCCC---CTHHHHHHHHHHHHHHTCEEEE-ECSSGG----GHHHHHH
T ss_pred HHHHHHcCCCeeeeeEEeCCC---------ChHhhcC---CCHHHHHHHHHHHHHcCCcEEE-EeCCHH----HHHHHHH
Confidence 9999999988763 3333211 1122332 2345556666667778877653 221111 0011000
Q ss_pred cCCCCccccccccccccCccccccchhhHHHhhhccCccc-cHHHHHh--hcCCCEEEEecC--CHHH----HHHHHHcC
Q 017718 173 FTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SWKWLQT--ITKLPILVKGVL--TAED----ARIAVQAG 243 (367)
Q Consensus 173 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~l~~--~~~~Pv~vK~v~--~~~~----a~~~~~~G 243 (367)
+ .+- + .-+.... ++..+++ .+++||++|..+ +.++ ++.+...|
T Consensus 189 ~-vd~--------------------------l-kIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 189 Y-ADI--------------------------I-QIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp H-CSE--------------------------E-EECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHTT
T ss_pred h-CCE--------------------------E-EECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHCC
Confidence 0 000 0 0000111 2222222 368999999875 4555 44556788
Q ss_pred CcEEEEcCCCCCCCCC---ccchHHHHHHHHHHhcCCCcEEEec----CCCC--HHHHHHHHHcCCCEEEechHHHHHhh
Q 017718 244 AAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVFLDG----GVRR--GTDVFKALALGASGIFIGRPVVYSLA 314 (367)
Q Consensus 244 ~d~i~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~~~via~G----GI~~--~~dv~kal~lGAd~V~ig~~~l~~l~ 314 (367)
-+-+++.-+|.+.... -...+..++.+++.. .+||+++. |-+. ..=...++++||++++|=+-+--.-+
T Consensus 241 N~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~--~lpVi~dssHs~G~~~~v~~~a~AAvA~GA~Gl~IE~H~~pd~a 318 (350)
T 1vr6_A 241 NTKIILCERGIRTFEKATRNTLDISAVPIIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKA 318 (350)
T ss_dssp CCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHHHTCSEEEEEBCSCGGGC
T ss_pred CCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhh--CCCEEEeCCCCCcccchHHHHHHHHHHhCCCEEEEEecCCcccC
Confidence 8677775566654322 122445566666654 68998843 4332 23355678899999999885422111
Q ss_pred -ccChHHH-HHHHHHHHHHHHHHHHHhC
Q 017718 315 -AEGEKGV-RRVLEMLREEFELAMALSG 340 (367)
Q Consensus 315 -~~G~~~v-~~~i~~l~~el~~~m~~~G 340 (367)
+.|...+ -+-++.|.++++..-..+|
T Consensus 319 l~D~~~sL~p~e~~~lv~~ir~i~~alg 346 (350)
T 1vr6_A 319 LSDGKQSLDFELFKELVQEMKKLADALG 346 (350)
T ss_dssp SSCGGGCBCHHHHHHHHHHHHHHHHHHT
T ss_pred CCchhhcCCHHHHHHHHHHHHHHHHHhC
Confidence 1232110 0234455555555555555
No 245
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.05 E-value=0.064 Score=51.48 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=55.1
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 58 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y 137 (343)
T 2v9d_A 58 IDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY 137 (343)
T ss_dssp HHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSS
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 46678999999999665442111111 133455666666677899998555445555553 3347999999999986
Q ss_pred HHhhccChHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~ 327 (367)
+.. .++++.++++.
T Consensus 138 ~~~---s~~~l~~~f~~ 151 (343)
T 2v9d_A 138 WKV---SEANLIRYFEQ 151 (343)
T ss_dssp SCC---CHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHH
Confidence 532 34444444433
No 246
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.05 E-value=0.064 Score=50.37 Aligned_cols=90 Identities=17% Similarity=0.283 Sum_probs=55.6
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (297)
T 2rfg_A 27 VDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY 106 (297)
T ss_dssp HHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46678899999999665442111111 133455566666677899987544444455543 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~v 121 (297)
T 2rfg_A 107 NRP---SQEGLYQHFKMV 121 (297)
T ss_dssp TCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 632 345555554444
No 247
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=95.04 E-value=0.062 Score=50.34 Aligned_cols=76 Identities=16% Similarity=0.220 Sum_probs=49.8
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH----HcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL----ALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal----~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++.. .+|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 28 IDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp HHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 45678899999999765442111111 13345566666667789999755555555555433 36999999999986
Q ss_pred H
Q 017718 311 Y 311 (367)
Q Consensus 311 ~ 311 (367)
+
T Consensus 108 ~ 108 (292)
T 2ojp_A 108 N 108 (292)
T ss_dssp S
T ss_pred C
Confidence 5
No 248
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.94 E-value=0.087 Score=50.01 Aligned_cols=92 Identities=14% Similarity=0.234 Sum_probs=54.5
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 38 v~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 117 (318)
T 3qfe_A 38 YAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAY 117 (318)
T ss_dssp HHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 45677899999999765442111111 123455666666777999998545445555553 3347999999999976
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
|.-- ..++++.++++.+
T Consensus 118 ~~kp-~~~~~l~~~f~~i 134 (318)
T 3qfe_A 118 FGKA-TTPPVIKSFFDDV 134 (318)
T ss_dssp ---C-CCHHHHHHHHHHH
T ss_pred cCCC-CCHHHHHHHHHHH
Confidence 6310 0244544444443
No 249
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.93 E-value=0.077 Score=49.90 Aligned_cols=90 Identities=14% Similarity=0.252 Sum_probs=56.9
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHH----HHHcCCCEEEechHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPV 309 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~ 309 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+ ++|||+--|=.+-.++++ +-.+|||++++-.|+
T Consensus 34 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~ 113 (301)
T 3m5v_A 34 IKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPY 113 (301)
T ss_dssp HHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC
Confidence 46678999999999665442111111 233456666677777 899999555555566554 334899999999998
Q ss_pred HHHhhccChHHHHHHHHHH
Q 017718 310 VYSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 310 l~~l~~~G~~~v~~~i~~l 328 (367)
.+.. .++++.++++.+
T Consensus 114 y~~~---s~~~l~~~f~~v 129 (301)
T 3m5v_A 114 YNKP---TQQGLYEHYKAI 129 (301)
T ss_dssp SSCC---CHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHH
Confidence 7632 344444444443
No 250
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.90 E-value=0.066 Score=50.22 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=57.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 30 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 109 (294)
T 3b4u_A 30 ARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSY 109 (294)
T ss_dssp HHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcC
Confidence 46678899999999765442111111 123445555566667899987444445455543 3347999999999987
Q ss_pred HH-hhccChHHHHHHHHHHHH
Q 017718 311 YS-LAAEGEKGVRRVLEMLRE 330 (367)
Q Consensus 311 ~~-l~~~G~~~v~~~i~~l~~ 330 (367)
+. . .++++.++++.+.+
T Consensus 110 ~~~~---s~~~l~~~f~~va~ 127 (294)
T 3b4u_A 110 FKNV---SDDGLFAWFSAVFS 127 (294)
T ss_dssp SCSC---CHHHHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHHHHH
Confidence 63 2 45666555555544
No 251
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.88 E-value=0.065 Score=50.55 Aligned_cols=76 Identities=21% Similarity=0.367 Sum_probs=49.6
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 39 VRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 56678999999999665442111111 133455666666677899997545445555543 3347999999999986
Q ss_pred H
Q 017718 311 Y 311 (367)
Q Consensus 311 ~ 311 (367)
+
T Consensus 119 ~ 119 (306)
T 1o5k_A 119 N 119 (306)
T ss_dssp S
T ss_pred C
Confidence 5
No 252
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=94.85 E-value=0.059 Score=50.48 Aligned_cols=90 Identities=18% Similarity=0.351 Sum_probs=54.5
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 27 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (292)
T 2vc6_A 27 VEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYY 106 (292)
T ss_dssp HHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 56678999999998665442111111 133455666666667899987444444455543 3347999999999986
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 107 ~~~---s~~~l~~~f~~i 121 (292)
T 2vc6_A 107 NKP---TQEGIYQHFKAI 121 (292)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 531 344444444433
No 253
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.84 E-value=0.075 Score=53.76 Aligned_cols=245 Identities=16% Similarity=0.204 Sum_probs=111.6
Q ss_pred ccccceeecccc-CCCCCCccceeE-cCeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHHh
Q 017718 42 AFSRILFRPRIL-IDVSKIDMNTTV-LGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVAS 119 (367)
Q Consensus 42 ~~~~i~l~pr~l-~~~~~vd~st~i-~g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~~ 119 (367)
-||++.|+|..- ...++||++|.+ -+.+++.||+-|||--.+ |..+|.+.++.|-..++. .++++|+.++
T Consensus 61 TfDDVlLvP~~s~v~p~~Vdl~t~lt~~i~L~iPlvSA~MDTVT------e~~MAIamAr~GGiGvIH--~n~sie~Qa~ 132 (556)
T 4af0_A 61 TYNDFLVLPGHINFPASDVSLQSKATKNIVLNTPFLSSPMDTVT------EDRMAIALALHGGLGIIH--HNCSAEEQAA 132 (556)
T ss_dssp CGGGEEECCCCCCSCGGGCCCCEEEETTEEESSCEEECCCTTTC------SHHHHHHHHHTTCEEEEC--CSSCHHHHHH
T ss_pred ChhhEEEccCCCCCCcccceeeeeccCCcEeCCCEEecCccccc------CHHHHHHHHHCCCeEEEc--CCCCHHHHHH
Confidence 699999999654 234689999999 579999999999995543 789999999999888884 4566776432
Q ss_pred h------CCCceEEE--EeecCCHHHHHHHHHHHHHcCCcEEEEecCCCC----CC-chhHHhhhhcC-CC--Ccccccc
Q 017718 120 T------GPGIRFFQ--LYVYKDRNVVAQLVRRAERAGFKAIALTVDTPR----LG-RREADIKNRFT-LP--PFLTLKN 183 (367)
Q Consensus 120 ~------~~~~~~~Q--Ly~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~----~g-~r~~~~~~~~~-~p--~~~~~~~ 183 (367)
. .. ..|+. +.. .....+.++++..++.++.++.|+-+... .| .-.||++..-. .| .-++. .
T Consensus 133 ~V~~VKr~e-~g~i~dPvtl-~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~d~~~~V~evMT~-~ 209 (556)
T 4af0_A 133 MVRRVKKYE-NGFITDPLCL-GPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQDAETPIKSVMTT-E 209 (556)
T ss_dssp HHHHHHHCC-C---------------------------------------------------------------------
T ss_pred HHHHHHhcc-cCccCCCeEc-CCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccccccceEhhhhccc-c
Confidence 1 11 11221 111 12233445555566667766665543110 00 11123321000 00 00000 0
Q ss_pred ccccccCccccccchhhHHHhhhc---------cCccc----cHHHHHhhcCCC------------EEEEecCC---HHH
Q 017718 184 FQGLDLGKMDEANDSGLAAYVAGQ---------IDRSL----SWKWLQTITKLP------------ILVKGVLT---AED 235 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~----~~~~l~~~~~~P------------v~vK~v~~---~~~ 235 (367)
+.-.. .........+.+... .+..+ +.+-+.+...-| |....... .+-
T Consensus 210 lvt~~----~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~VgAAVgv~~d~~eR 285 (556)
T 4af0_A 210 VVTGS----SPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQNYPYASKVPESKQLYCGAAIGTRPGDKDR 285 (556)
T ss_dssp ----------------------------------------------------CTTCCBCTTTCCBCCEEEECSSHHHHHH
T ss_pred eEEec----CCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhhCCcchhcchhhceeeEEEeccCccHHHH
Confidence 00000 000000000000000 00000 111111111112 22222223 344
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+..+.++|+|.|++...-|+ .....+.+..+++..+ +++||+ |.|.|++-+...+..|||+|-+|-
T Consensus 286 ~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~p-~~~via-GNVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 286 LKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTYP-KIDVIA-GNVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHhhCC-cceEEe-ccccCHHHHHHHHHcCCCEEeecC
Confidence 78899999999999753332 2345677888877653 677776 889999999988899999997763
No 254
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=94.80 E-value=1.4 Score=42.14 Aligned_cols=239 Identities=14% Similarity=0.154 Sum_probs=119.2
Q ss_pred eeEcCeee---ccceEeCcccchhccCChhhHHHHHHHHHcCCcee-ecCCCCCCHHHHH-hh---CC--Cc--eEEEEe
Q 017718 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVA-ST---GP--GI--RFFQLY 130 (367)
Q Consensus 63 t~i~g~~l---~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~-vs~~~~~~~e~i~-~~---~~--~~--~~~QLy 130 (367)
+++.|.++ ..|++||.++.......+--..++++|+++|+.++ +.++. .+.+. .. .. +. ..+.+|
T Consensus 7 i~i~~~~iG~~~~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k---~~tl~s~~~~~fq~~~~~~~~y~~~ 83 (349)
T 2wqp_A 7 FKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHI---VEDEMSDEAKQVIPGNADVSIYEIM 83 (349)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECC---HHHHCCGGGGGCCCTTCSSCHHHHH
T ss_pred EEECCEEECCCCceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecc---cccccCcchhccccCCCCccHHHHH
Confidence 44555555 34899998875322222233478999999999876 33332 22221 10 00 00 000111
Q ss_pred e--cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhcc
Q 017718 131 V--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQI 208 (367)
Q Consensus 131 ~--~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (367)
. .-..+....+.+.+++.|...+-==.| .+.-|....+..|- +. -.
T Consensus 84 ~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d-----~~svd~l~~~~v~~-~K--------------------------I~ 131 (349)
T 2wqp_A 84 ERCALNEEDEIKLKEYVESKGMIFISTLFS-----RAAALRLQRMDIPA-YK--------------------------IG 131 (349)
T ss_dssp HHHCCCHHHHHHHHHHHHHTTCEEEEEECS-----HHHHHHHHHHTCSC-EE--------------------------EC
T ss_pred HHhCCCHHHHHHHHHHHHHhCCeEEEeeCC-----HHHHHHHHhcCCCE-EE--------------------------EC
Confidence 1 235677788888999999876542222 11122221221110 00 00
Q ss_pred Cccc-cHHHHHh--hcCCCEEEEecC-CHHH----HHHHHHcCCcEEEEcCCCCCCCCCcc--chHHHHHHHHHHhcCCC
Q 017718 209 DRSL-SWKWLQT--ITKLPILVKGVL-TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRI 278 (367)
Q Consensus 209 d~~~-~~~~l~~--~~~~Pv~vK~v~-~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~~ 278 (367)
..++ ++..|++ .+++||++|..+ +.++ ++.+.+.|.+.+.+ |+-+....-+ ..+..++.+++..+ .+
T Consensus 132 S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLl--hc~s~Yp~~~~~~nL~ai~~lk~~f~-~l 208 (349)
T 2wqp_A 132 SGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALL--HCTNIYPTPYEDVRLGGMNDLSEAFP-DA 208 (349)
T ss_dssp GGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEE--ECCCCSSCCGGGCCTHHHHHHHHHCT-TS
T ss_pred cccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEE--eccCCCCCChhhcCHHHHHHHHHHCC-CC
Confidence 1122 3444443 368999999875 4544 45556778876666 4332222211 23455666665541 47
Q ss_pred cEEEecCCCCHHHHHHHHHcCCCEEEechHHHHHhhccChHH---H-HHHHHHHHHHHHHHHHHhCC
Q 017718 279 PVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKG---V-RRVLEMLREEFELAMALSGC 341 (367)
Q Consensus 279 ~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~l~~~G~~~---v-~~~i~~l~~el~~~m~~~G~ 341 (367)
||..++==....-...|.++||+ +|=+-|-..-...|.++ + -+-+..|.++++..-..+|.
T Consensus 209 pVg~sdHt~G~~~~~AAvAlGA~--iIEkH~tld~a~~G~D~~~SL~p~ef~~lv~~ir~~~~alG~ 273 (349)
T 2wqp_A 209 IIGLSDHTLDNYACLGAVALGGS--ILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGG 273 (349)
T ss_dssp EEEEECCSSSSHHHHHHHHHTCC--EEEEEBCSCTTCCSTTGGGCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CEEeCCCCCcHHHHHHHHHhCCC--EEEeCCCccccCCCCChhhhCCHHHHHHHHHHHHHHHHHhCC
Confidence 88664411113344567789999 44443211111123211 0 12345666677777777774
No 255
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=94.80 E-value=1.4 Score=40.80 Aligned_cols=204 Identities=22% Similarity=0.286 Sum_probs=106.4
Q ss_pred CCCccceeEcCeee--ccceEeCcccchhccCChhhHHHHHHHHHcCCceee-cCCCCCCHHHHHhhCCCceEEEEeecC
Q 017718 57 SKIDMNTTVLGFKI--SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-SSWSTSSVEEVASTGPGIRFFQLYVYK 133 (367)
Q Consensus 57 ~~vd~st~i~g~~l--~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-s~~~~~~~e~i~~~~~~~~~~QLy~~~ 133 (367)
..-++.+++.+..+ ..|++||-.+ ...+.+.-..+++.+++.|..++- ..+...+ . +..|| +-
T Consensus 21 ~~~~~~i~i~~~~iG~~~~~vIAgpc--~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprt-------s--~~~f~---g~ 86 (276)
T 1vs1_A 21 ERRETVVEVEGVRIGGGSKAVIAGPC--SVESWEQVREAALAVKEAGAHMLRGGAFKPRT-------S--PYSFQ---GL 86 (276)
T ss_dssp SCSCCCEEETTEEEBTTBCEEEEECS--BCCCHHHHHHHHHHHHHHTCSEEECBSSCCCS-------S--TTSCC---CC
T ss_pred CCCCcEEEECCEEECCCCeEEEEecC--CCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCC-------C--hhhhc---CC
Confidence 33455566655444 2377777654 222223334789999999988763 3333211 1 11133 11
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
..+....+.+.+++.|...+. ++--|. .-+....+ .+- ..-+....
T Consensus 87 g~~gl~~l~~~~~~~Gl~~~t-e~~d~~----~~~~l~~~-vd~---------------------------~kIgs~~~~ 133 (276)
T 1vs1_A 87 GLEGLKLLRRAGDEAGLPVVT-EVLDPR----HVETVSRY-ADM---------------------------LQIGARNMQ 133 (276)
T ss_dssp THHHHHHHHHHHHHHTCCEEE-ECCCGG----GHHHHHHH-CSE---------------------------EEECGGGTT
T ss_pred CHHHHHHHHHHHHHcCCcEEE-ecCCHH----HHHHHHHh-CCe---------------------------EEECccccc
Confidence 355566666667788877653 221111 00110000 000 00000111
Q ss_pred cHHHHH--hhcCCCEEEEecC--CHHH----HHHHHHcCCcEEEEcCCCCCCCCC---ccchHHHHHHHHHHhcCCCcEE
Q 017718 213 SWKWLQ--TITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDY---VPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 ~~~~l~--~~~~~Pv~vK~v~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~---~~~~~~~l~~i~~~~~~~~~vi 281 (367)
+...++ ..+++||++|..+ +.++ +..+...|-+-+++--.|.+.... -...+..++.+++.. .+||+
T Consensus 134 n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~--~lpVi 211 (276)
T 1vs1_A 134 NFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEAT--HLPVI 211 (276)
T ss_dssp CHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHB--SSCEE
T ss_pred CHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHh--CCCEE
Confidence 222222 2368999999875 4555 444566787555553225544322 223556677776654 68998
Q ss_pred Eec----CCCC--HHHHHHHHHcCCCEEEechHH
Q 017718 282 LDG----GVRR--GTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 282 a~G----GI~~--~~dv~kal~lGAd~V~ig~~~ 309 (367)
++. |.+. ..-...++++||++++|=+-+
T Consensus 212 ~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~ 245 (276)
T 1vs1_A 212 VDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHP 245 (276)
T ss_dssp ECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCS
T ss_pred EeCCCCCCccchHHHHHHHHHHcCCCEEEEEecC
Confidence 743 4433 333556788999999998855
No 256
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=94.78 E-value=0.046 Score=51.86 Aligned_cols=92 Identities=18% Similarity=0.172 Sum_probs=59.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|- +-.++++ +-.+|||++++..|+.
T Consensus 39 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y 117 (316)
T 3e96_A 39 VDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIH 117 (316)
T ss_dssp HHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 45677899999999665442111111 1234566666667779999986564 7777664 3347999999999986
Q ss_pred HHhhccChHHHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLREE 331 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~e 331 (367)
+. -.++++.++++.+.+.
T Consensus 118 ~~---~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 118 PY---VTAGGVYAYFRDIIEA 135 (316)
T ss_dssp SC---CCHHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHh
Confidence 42 2456666555555443
No 257
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=94.74 E-value=1.9 Score=40.25 Aligned_cols=179 Identities=13% Similarity=0.100 Sum_probs=100.4
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+ -.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 4455666 33333433444666666778876443 3 33456766522 21 22 45666654 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 85 i~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 122 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCV--AGYY-----------------NRPS-------------QEGLYQ----------HFKMVH 122 (297)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCTT-----------------TCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999873 3321 0000 001111 224666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|.-+ .| .+..+.++.+..++++.| .+|. -.
T Consensus 123 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--~g--------d~~~~~~~~~~~~~~f~v-~~G~---d~ 188 (297)
T 2rfg_A 123 DAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDA--TT--------DLARISRERMLINKPFSF-LSGD---DM 188 (297)
T ss_dssp HHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEEC--SC--------CTTHHHHHHTTCCSCCEE-EESC---GG
T ss_pred HhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEeC--CC--------CHHHHHHHHHhcCCCEEE-EeCc---HH
Confidence 778999998764 5678777776542 2222221 11 122334444444445555 4452 34
Q ss_pred HHHHHHHcCCCEEEechHH
Q 017718 291 DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~ 309 (367)
-++.++.+||+++.-+..-
T Consensus 189 ~~l~~l~~G~~G~is~~an 207 (297)
T 2rfg_A 189 TAIAYNASGGQGCISVSAN 207 (297)
T ss_dssp GHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHCCCCEEEecHHH
Confidence 4678899999999988753
No 258
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=94.74 E-value=0.19 Score=48.84 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++-++++++-. +. .
T Consensus 163 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~----------------------------------------------~~-~ 195 (388)
T 2nql_A 163 RTLKARGELAKYWQDRGFNAFKFATPVADD----------------------------------------------GP-A 195 (388)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGCTT----------------------------------------------CH-H
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEeCCCCCh----------------------------------------------HH-H
Confidence 477777888888889999999887653100 00 1
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ ++||.++.- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+++
T Consensus 196 e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPI~~d 265 (388)
T 2nql_A 196 AEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDPWFAEA--------PVWTEDIAGLEKVSKNT--DVPIAVG 265 (388)
T ss_dssp HHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTSC--CSCEEEC
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEEEe
Confidence 122566655 578888753 34444 45667778887631 11234677778877655 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..++.+++..| +|.|++-.
T Consensus 266 E~~~~~~~~~~~i~~~~~d~v~ik~ 290 (388)
T 2nql_A 266 EEWRTHWDMRARIERCRIAIVQPEM 290 (388)
T ss_dssp TTCCSHHHHHHHHTTSCCSEECCCH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEecC
Confidence 9999999999999987 89999854
No 259
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=94.72 E-value=0.081 Score=48.21 Aligned_cols=74 Identities=24% Similarity=0.281 Sum_probs=48.5
Q ss_pred HHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-H---------HHHHHHHcCCCEEEechH
Q 017718 239 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-T---------DVFKALALGASGIFIGRP 308 (367)
Q Consensus 239 ~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-~---------dv~kal~lGAd~V~ig~~ 308 (367)
..+.|.++++.+ ..+ +.++++..+ ..+++.+|||+-. . .+.+++..|||.+.+||+
T Consensus 152 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 217 (246)
T 2yyu_A 152 AKESGLDGVVCS------------ANE-AAFIKERCG-ASFLAVTPGIRFADDAAHDQVRVVTPRKARALGSDYIVIGRS 217 (246)
T ss_dssp HHHHTCCEEECC------------HHH-HHHHHHHHC-TTSEEEECCCCCCC-------CCCCHHHHHHHTCSEEEECHH
T ss_pred HHHhCCCEEEeC------------HHH-HHHHHHhcC-CCCEEEeCCcCCCCCCcccccccCCHHHHHHcCCCEEEECHh
Confidence 467888887652 234 666666654 3459999999742 2 266788899999999999
Q ss_pred HHHHhhccChHHHHHHHHHHHHHH
Q 017718 309 VVYSLAAEGEKGVRRVLEMLREEF 332 (367)
Q Consensus 309 ~l~~l~~~G~~~v~~~i~~l~~el 332 (367)
++.+ .. ..+.++.+++++
T Consensus 218 I~~a---~d---p~~a~~~l~~~i 235 (246)
T 2yyu_A 218 LTRA---AD---PLRTYARLQHEW 235 (246)
T ss_dssp HHTS---SS---HHHHHHHHHHHC
T ss_pred hcCC---CC---HHHHHHHHHHHH
Confidence 8742 12 233455555544
No 260
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.71 E-value=0.082 Score=53.19 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++.+.++|+|.|++....| ......+.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 231 ~~~a~~l~~aG~d~I~id~a~g----~~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVDTAHG----HSKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHHHHHTTCSEEEEECSCC----SBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhhcccceEEecccCC----cchhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHHcCCCEEEEC
Confidence 5778999999999999854222 12345677888877663 578887 77999999999999999999985
No 261
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.66 E-value=0.083 Score=49.84 Aligned_cols=92 Identities=10% Similarity=0.074 Sum_probs=56.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHH----HHHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVF----KALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~----kal~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.+++ .+-.+|||++++-.|+.
T Consensus 41 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 120 (307)
T 3s5o_A 41 LHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCY 120 (307)
T ss_dssp HHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCT
T ss_pred HHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 35567899999999765442111111 12345555566666789998854545555555 33458999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .-.++++.++++.+
T Consensus 121 ~~~-~~s~~~l~~~f~~i 137 (307)
T 3s5o_A 121 YRG-RMSSAALIHHYTKV 137 (307)
T ss_dssp TGG-GCCHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHH
Confidence 631 01345555555444
No 262
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=94.65 E-value=2.2 Score=41.32 Aligned_cols=199 Identities=13% Similarity=0.119 Sum_probs=99.9
Q ss_pred eeEcCeee---ccceEeCcccchhccCChhhHHHHHHHHHcCCcee-ecCCCCCCHHHHHhhCCCceEEE----------
Q 017718 63 TTVLGFKI---SMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT-LSSWSTSSVEEVASTGPGIRFFQ---------- 128 (367)
Q Consensus 63 t~i~g~~l---~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~-vs~~~~~~~e~i~~~~~~~~~~Q---------- 128 (367)
.+|.++.+ ..|++||=+|.......+--..++++|+++|+.++ +.++.. +.+. .|...-||
T Consensus 16 ~~~~~~~ig~~~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~---~tl~--s~~~~~fq~~~~~~~~~y 90 (385)
T 1vli_A 16 FQIANKTVGKDAPVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQA---DRMY--QKDPGLYKTAAGKDVSIF 90 (385)
T ss_dssp EEETTEEEETTSCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCG---GGGT--SCCC---------CCCHH
T ss_pred eeECCEEeCCCCCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeecc---Cccc--CcchhhhccCCCCCccHH
Confidence 44555555 35899998765432222223478999999999876 333321 1110 00000122
Q ss_pred -Eee--cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhh
Q 017718 129 -LYV--YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVA 205 (367)
Q Consensus 129 -Ly~--~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (367)
+|. .-..+....+.+.+++.|...+- +|. ..+.-|....+..|- +.
T Consensus 91 e~~~~~~l~~e~~~~L~~~~~~~Gi~~~s----tpf-D~~svd~l~~~~vd~-~K------------------------- 139 (385)
T 1vli_A 91 SLVQSMEMPAEWILPLLDYCREKQVIFLS----TVC-DEGSADLLQSTSPSA-FK------------------------- 139 (385)
T ss_dssp HHGGGBSSCGGGHHHHHHHHHHTTCEEEC----BCC-SHHHHHHHHTTCCSC-EE-------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHcCCcEEE----ccC-CHHHHHHHHhcCCCE-EE-------------------------
Confidence 221 22466778888999999977552 222 122222222221110 00
Q ss_pred hccCccc-cHHHHHh--hcCCCEEEEecC-CHHH----HHHHHHcCC-cEEEEcCCCCCCCCCcc--chHHHHHHHHHHh
Q 017718 206 GQIDRSL-SWKWLQT--ITKLPILVKGVL-TAED----ARIAVQAGA-AGIIVSNHGARQLDYVP--ATIMALEEVVKAT 274 (367)
Q Consensus 206 ~~~d~~~-~~~~l~~--~~~~Pv~vK~v~-~~~~----a~~~~~~G~-d~i~vs~~gg~~~~~~~--~~~~~l~~i~~~~ 274 (367)
-...++ ++..|++ .+++||++|..+ +.++ ++.+.+.|. +.+.+ |+-+....-+ ..+..++.+++..
T Consensus 140 -IgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLl--hc~s~YPtp~~~~nL~aI~~Lk~~f 216 (385)
T 1vli_A 140 -IASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIM--HCVAKYPAPPEYSNLSVIPMLAAAF 216 (385)
T ss_dssp -ECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEE--EECSSSSCCGGGCCTTHHHHHHHHS
T ss_pred -ECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEE--eccCCCCCChhhcCHHHHHHHHHHc
Confidence 001122 3444443 368999999875 4544 445566787 44444 3322222211 1334566665554
Q ss_pred cCCCcEEEecCCCC--HHHHHHHHHcCCCE
Q 017718 275 QGRIPVFLDGGVRR--GTDVFKALALGASG 302 (367)
Q Consensus 275 ~~~~~via~GGI~~--~~dv~kal~lGAd~ 302 (367)
+ .+||..++ =.. ..-...|.++||+.
T Consensus 217 ~-~lpVG~Sd-Ht~G~~~~~~AAvAlGA~i 244 (385)
T 1vli_A 217 P-EAVIGFSD-HSEHPTEAPCAAVRLGAKL 244 (385)
T ss_dssp T-TSEEEEEE-CCSSSSHHHHHHHHTTCSE
T ss_pred C-CCCEEeCC-CCCCchHHHHHHHHcCCCE
Confidence 2 47885544 222 34455678899993
No 263
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=94.64 E-value=0.062 Score=48.50 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=76.2
Q ss_pred EEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhh
Q 017718 127 FQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (367)
Q Consensus 127 ~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (367)
+-+....+.+...++++.+.+.|++.+-++...+.. .+
T Consensus 29 i~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~--------------------------------------~~---- 66 (225)
T 1mxs_A 29 LPVITIAREEDILPLADALAAGGIRTLEVTLRSQHG--------------------------------------LK---- 66 (225)
T ss_dssp EEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHH--------------------------------------HH----
T ss_pred EEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccH--------------------------------------HH----
Confidence 333334566666778888888999988876542210 00
Q ss_pred ccCccccHHHHHhhc-CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 207 QIDRSLSWKWLQTIT-KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 207 ~~d~~~~~~~l~~~~-~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
.++.+++.+ ++-+....+.+.++++.+.++|+|+++. |+ . +.+.+ +.++.. .+++|. |
T Consensus 67 ------~i~~l~~~~~~~~igagtvl~~d~~~~A~~aGAd~v~~---p~--~-----d~~v~-~~~~~~--g~~~i~--G 125 (225)
T 1mxs_A 67 ------AIQVLREQRPELCVGAGTVLDRSMFAAVEAAGAQFVVT---PG--I-----TEDIL-EAGVDS--EIPLLP--G 125 (225)
T ss_dssp ------HHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSSEEC---SS--C-----CHHHH-HHHHHC--SSCEEC--E
T ss_pred ------HHHHHHHhCcccEEeeCeEeeHHHHHHHHHCCCCEEEe---CC--C-----CHHHH-HHHHHh--CCCEEE--e
Confidence 122455555 3444445567889999999999999964 21 1 22333 233333 567765 4
Q ss_pred CCCHHHHHHHHHcCCCEEEe
Q 017718 286 VRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~i 305 (367)
+.|++++.+++.+|||.|.+
T Consensus 126 ~~t~~e~~~A~~~Gad~vk~ 145 (225)
T 1mxs_A 126 ISTPSEIMMGYALGYRRFKL 145 (225)
T ss_dssp ECSHHHHHHHHTTTCCEEEE
T ss_pred eCCHHHHHHHHHCCCCEEEE
Confidence 99999999999999999999
No 264
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.60 E-value=0.064 Score=50.83 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=55.7
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|= +-.++++ +-.+|||++++-.|++
T Consensus 39 v~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y 117 (314)
T 3d0c_A 39 VEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVH 117 (314)
T ss_dssp HHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCC
T ss_pred HHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 45678899999998665442111111 1334556666666778999873333 5555553 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLR 329 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~ 329 (367)
+.. .++++.++++.+.
T Consensus 118 ~~~---s~~~l~~~f~~va 133 (314)
T 3d0c_A 118 PYI---TDAGAVEYYRNII 133 (314)
T ss_dssp SCC---CHHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHHH
Confidence 632 3555555555443
No 265
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=94.53 E-value=0.62 Score=42.62 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=58.9
Q ss_pred cHHHHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 213 SWKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 213 ~~~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
++..+|+.+++||+-|.- .+......+..+|||+|.+...- ++ ..++..+.+..+.+ .+.++++ ++|.++
T Consensus 92 dL~~ir~~v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~---l~--~~~l~~l~~~a~~l--Gl~~lvE--v~~~eE 162 (251)
T 1i4n_A 92 FVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARI---LT--AEQIKEIYEAAEEL--GMDSLVE--VHSRED 162 (251)
T ss_dssp HHHHHHTTCCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGG---SC--HHHHHHHHHHHHTT--TCEEEEE--ECSHHH
T ss_pred HHHHHHHhCCCCEEEeeCCCCHHHHHHHHHcCCCEEEEeccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCCHHH
Confidence 345788889999999985 33445666999999999885321 11 12333333333323 5666665 679999
Q ss_pred HHHHHHc-CCCEEEech
Q 017718 292 VFKALAL-GASGIFIGR 307 (367)
Q Consensus 292 v~kal~l-GAd~V~ig~ 307 (367)
+.+++.+ |++.|++-.
T Consensus 163 ~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 163 LEKVFSVIRPKIIGINT 179 (251)
T ss_dssp HHHHHTTCCCSEEEEEC
T ss_pred HHHHHhcCCCCEEEEeC
Confidence 9999999 999998865
No 266
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.48 E-value=0.1 Score=52.60 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=129.0
Q ss_pred ccccceeeccccC-CCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-
Q 017718 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA- 118 (367)
Q Consensus 42 ~~~~i~l~pr~l~-~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~- 118 (367)
.||++.|+|..-. ..+++|++|.+- +..+..|++.|||...+ +..++.+.++.|-..++. .+.+.++..
T Consensus 12 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtVT------e~~ma~a~a~~GGiGvI~--~n~s~e~qa~ 83 (496)
T 4fxs_A 12 TFDDVLLVPAHSTVLPNTADLRTRLTKNIALNIPMVSASMDTVT------EARLAIALAQEGGIGFIH--KNMSIEQQAA 83 (496)
T ss_dssp CGGGEEECCCCCCCCGGGCBCCEEEETTEEESSSEEECCCTTTC------SHHHHHHHHHHTCEEEEC--SSSCHHHHHH
T ss_pred CcccEEEecCccccccccccccceeccccccCCCceecCcchhh------HHHHHHHHHHcCCcceec--CCCCHHHHHH
Confidence 4999999996542 235789999874 68899999999996554 567777777777655554 244554422
Q ss_pred ------hhCC----CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCC--CCCCchhHHhhhhcCCCCccccccccc
Q 017718 119 ------STGP----GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDT--PRLGRREADIKNRFTLPPFLTLKNFQG 186 (367)
Q Consensus 119 ------~~~~----~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~--p~~g~r~~~~~~~~~~p~~~~~~~~~~ 186 (367)
.... .+.++ .......++++...+.++..+.|.=+. .+.=...+|++... ........+..
T Consensus 84 ~V~~Vk~~~~~m~~d~v~v-----~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~~--~~~~~v~diM~ 156 (496)
T 4fxs_A 84 QVHQVKIFEAGVVTHPVTV-----RPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFVT--DLTKSVAAVMT 156 (496)
T ss_dssp HHHHHHHCCC--CBCCCCB-----CSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTCC--CTTSBGGGTSE
T ss_pred HHHhccccccccccCceEE-----CCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhcc--cCCCcHHHHhc
Confidence 1111 22222 122334566777777888877664321 11001234554111 00000000000
Q ss_pred -c-ccCcccc-ccchhhHHHhhhc---------cCcc----ccHHHHHhhc---------CCCEEEEe--c---CCHHHH
Q 017718 187 -L-DLGKMDE-ANDSGLAAYVAGQ---------IDRS----LSWKWLQTIT---------KLPILVKG--V---LTAEDA 236 (367)
Q Consensus 187 -~-~~~~~~~-~~~~~~~~~~~~~---------~d~~----~~~~~l~~~~---------~~Pv~vK~--v---~~~~~a 236 (367)
. +.....+ .......+.+... .+.. ++.+.+.+.. +..+.+.. . .+.+.+
T Consensus 157 p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~p~a~~d~~grL~v~aavG~~~d~~~~a 236 (496)
T 4fxs_A 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESKPNACKDEQGRLRVGAAVGAAPGNEERV 236 (496)
T ss_dssp EGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCCTTCCBCTTSCBCCEEECCSSSCCHHHH
T ss_pred CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcccchhhhcccceeeeeeeccccchHHHH
Confidence 0 0000000 0000000000000 0000 1111111111 11222221 1 246889
Q ss_pred HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 237 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 237 ~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
+.+.++|+|.|.+...-| ......+.+.++++..+ ++||++ |.+.+.+++.++..+|||+|.+|
T Consensus 237 ~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 237 KALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHhccCceEEeccccc----cchHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHHhCCCEEEEC
Confidence 999999999999854222 12345677888887763 688888 78999999999999999999986
No 267
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=94.48 E-value=0.79 Score=43.90 Aligned_cols=119 Identities=9% Similarity=0.038 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHHH-cCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 133 KDRNVVAQLVRRAER-AGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~-~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
.+++.+.+.++++.+ .||+++-++++++-. + .+
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~~ 174 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKLGARTP--A--------------------------------------------QD 174 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEECSSSCH--H--------------------------------------------HH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEecCCCCh--H--------------------------------------------HH
Confidence 567777778888888 999999887764210 0 00
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
. ..+.+|+.. ++++.+..- .+.++ ++.+.+.|++.|- +. ..+..++.+.++++.+ ++||++
T Consensus 175 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~--~ipIa~ 244 (370)
T 1nu5_A 175 LEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAGVELVE-------QP-VPRANFGALRRLTEQN--GVAILA 244 (370)
T ss_dssp HHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEE-------CC-SCTTCHHHHHHHHHHC--SSEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCcceEe-------CC-CCcccHHHHHHHHHhC--CCCEEe
Confidence 0 112556554 367777643 34444 5567788988764 11 1234677888888776 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 245 dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (370)
T 1nu5_A 245 DESLSSLSSAFELARDHAVDAFSLKL 270 (370)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEch
Confidence 99999999999999987 89999964
No 268
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=94.47 E-value=0.11 Score=49.00 Aligned_cols=64 Identities=20% Similarity=0.244 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHcCCCEE
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGI 303 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~----------dv~kal~lGAd~V 303 (367)
+-|+.+.++|+||++.+.+ . +..+++.++ .-.++..+||+-.. .+.+++..|||.+
T Consensus 162 ~lA~~a~~~G~dGvV~s~~----------E---~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~i 227 (303)
T 3ru6_A 162 NFSKISYENGLDGMVCSVF----------E---SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYI 227 (303)
T ss_dssp HHHHHHHHTTCSEEECCTT----------T---HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECHH----------H---HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHHcCCCEE
Confidence 3467788999999987431 1 345666554 33488899998321 3557788999999
Q ss_pred EechHHHH
Q 017718 304 FIGRPVVY 311 (367)
Q Consensus 304 ~ig~~~l~ 311 (367)
.+||++..
T Consensus 228 VvGr~I~~ 235 (303)
T 3ru6_A 228 VVGRPIYK 235 (303)
T ss_dssp EECHHHHT
T ss_pred EEChHHhC
Confidence 99998764
No 269
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.46 E-value=0.071 Score=52.28 Aligned_cols=67 Identities=27% Similarity=0.383 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++.+.++|+|.|++..+.|. .....+.+.++++.. .+||++ |++.+.+++.++..+|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~----~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH----SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS----BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC----cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHHcCCCEEEEe
Confidence 67899999999999988432221 112356666666544 678887 78999999999999999999996
No 270
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=94.46 E-value=3.3 Score=38.94 Aligned_cols=180 Identities=16% Similarity=0.127 Sum_probs=104.0
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.+|-. +. .. -|.+...- ..+-...
T Consensus 28 ~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~a 106 (315)
T 3si9_A 28 TALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEA 106 (315)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 5556776433323333334666667778876443 3 23445666522 21 22 46666654 4566777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.|.
T Consensus 107 i~la~~A~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~va 144 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVV--TPYY-----------------NRPN-------------QRGLYT----------HFSSIA 144 (315)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999873 2331 0000 001111 124677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHH-cC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQ-AG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~-~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.+++||++=.+ .+++...++.+ .. +-+|--+ . ..+..+.++.+..++++.|+ +|. .
T Consensus 145 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKds--s--------gd~~~~~~l~~~~~~~f~v~-~G~---d 210 (315)
T 3si9_A 145 KAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDA--T--------GKIERASEQREKCGKDFVQL-SGD---D 210 (315)
T ss_dssp HHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC--S--------CCTHHHHHHHHHHCSSSEEE-ESC---G
T ss_pred HcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeC--C--------CCHHHHHHHHHHcCCCeEEE-ecC---H
Confidence 778999999875 56788777776 43 2233222 1 12334455555555567664 452 3
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
.-++.++++||+++.-+..-
T Consensus 211 ~~~l~~l~~G~~G~is~~an 230 (315)
T 3si9_A 211 CTALGFNAHGGVGCISVSSN 230 (315)
T ss_dssp GGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHcCCCEEEecHHH
Confidence 44678899999999988743
No 271
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.46 E-value=0.11 Score=49.09 Aligned_cols=89 Identities=15% Similarity=0.238 Sum_probs=55.9
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCC-CEEEechHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGA-SGIFIGRPV 309 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGA-d~V~ig~~~ 309 (367)
++.+.+.|+|+|.+.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|| |++++-.|+
T Consensus 34 v~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 34 IEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPY 113 (311)
T ss_dssp HHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCC
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCC
Confidence 46678999999999765442111111 123455666666677899999555555666654 334697 999999998
Q ss_pred HHHhhccChHHHHHHHHH
Q 017718 310 VYSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 310 l~~l~~~G~~~v~~~i~~ 327 (367)
.+.. .++++.++++.
T Consensus 114 y~~~---s~~~l~~~f~~ 128 (311)
T 3h5d_A 114 YNKP---SQEGMYQHFKA 128 (311)
T ss_dssp SSCC---CHHHHHHHHHH
T ss_pred CCCC---CHHHHHHHHHH
Confidence 7632 34444444433
No 272
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.40 E-value=3.3 Score=38.79 Aligned_cols=182 Identities=16% Similarity=0.140 Sum_probs=107.4
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCcee--ecC---CCCCCHHHHH-------hhCC--CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSS---WSTSSVEEVA-------STGP--GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs~---~~~~~~e~i~-------~~~~--~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.++-..+.+-..+.|+... .|| ..+.+.+|-. +... -+.+...- ..+-+..
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 556677754333444555577777778887533 332 3455666522 2222 35666654 3466677
Q ss_pred HHHHHHHHHcCC-cEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 139 AQLVRRAERAGF-KAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 139 ~~~l~ra~~~G~-~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
.++.+.|+++|+ +++.+. .|.. ...+ ..++.+ .++.+
T Consensus 92 i~la~~A~~~Ga~davlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~v 129 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAI--VPYY-----------------NKPS-------------QEGMYQ----------HFKAI 129 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHhcCCCcEEEEc--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 788999999997 998873 2321 0000 001111 23467
Q ss_pred HhhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 218 QTITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 218 ~~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
.+.+++||++=.+ .+++...++.+.. ..+-+ .+.. .+..+.++.+..++++.|+ +|. ..
T Consensus 130 a~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgi-------Kdss--d~~~~~~~~~~~~~~f~v~-~G~---d~ 195 (311)
T 3h5d_A 130 ADASDLPIIIYNIPGRVVVELTPETMLRLADHP-NIIGV-------KECT--SLANMAYLIEHKPEEFLIY-TGE---DG 195 (311)
T ss_dssp HHSCSSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEE-------EECS--CHHHHHHHHHHCCSSCEEE-ECC---GG
T ss_pred HHhCCCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEE-------EeCC--CHHHHHHHHHHcCCCEEEE-ECc---HH
Confidence 7778999998875 5678777777642 22212 1222 4555666666665566555 452 34
Q ss_pred HHHHHHHcCCCEEEechHHHH
Q 017718 291 DVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l~ 311 (367)
..+.++++||+++.-+..-++
T Consensus 196 ~~l~~l~~Ga~G~is~~an~~ 216 (311)
T 3h5d_A 196 DAFHAMNLGADGVISVASHTN 216 (311)
T ss_dssp GHHHHHHHTCCEEEESTHHHH
T ss_pred HHHHHHHcCCCEEEechhhhC
Confidence 477889999999998886544
No 273
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=94.37 E-value=0.37 Score=46.47 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.++||+++-+++++.. |. +.
T Consensus 144 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~~--------------------------------------------~~ 176 (379)
T 2rdx_A 144 RSEAETRAELARHRAAGYRQFQIKVGADW---QS--------------------------------------------DI 176 (379)
T ss_dssp SCSHHHHHHHHHHHHTTCCEEEEECCSCH---HH--------------------------------------------HH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCH---HH--------------------------------------------HH
Confidence 56777788888899999999988765310 00 00
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
-.+.+|+.+ ++||.++.- .+.+++ +.+.+.|+ .|- +. -+ .++.+.++++.+ ++||+++
T Consensus 177 e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------~P--~~-~~~~~~~l~~~~--~iPI~~d 243 (379)
T 2rdx_A 177 DRIRACLPLLEPGEKAMADANQGWRVDNAIRLARATRDLDY-ILE-------QP--CR-SYEECQQVRRVA--DQPMKLD 243 (379)
T ss_dssp HHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHHHHTTTSCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEEC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhCCe-EEe-------CC--cC-CHHHHHHHHhhC--CCCEEEe
Confidence 123666666 478888754 355554 44556676 542 11 11 677788887655 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..++.+++..| +|.|++-.
T Consensus 244 e~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 244 ECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred CCcCCHHHHHHHHHcCCCCEEEEec
Confidence 9999999999999986 89999954
No 274
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.36 E-value=3.3 Score=38.57 Aligned_cols=181 Identities=10% Similarity=0.079 Sum_probs=102.7
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee-----cCCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL-----SSWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v-----s~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ |+..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 10 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 88 (300)
T 3eb2_A 10 PYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVADA 88 (300)
T ss_dssp EBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHHH
T ss_pred EEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 4556676433323333334566666677875443 334556766532 22 22 35777765 4566677
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+.. |.. ...+ ..++.+ .++.+.
T Consensus 89 i~la~~a~~~Gadavlv~~--P~y-----------------~~~~-------------~~~l~~----------~f~~va 126 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAIL--EAY-----------------FPLK-------------DAQIES----------YFRAIA 126 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEE--CCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcC--CCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 7899999999999998732 221 0000 001111 124677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
+.+++||++=.+ .+++...++.+.. ..+-+ .+.. ..+..+.++.+..++++.|+. |.= ..
T Consensus 127 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgi-------Kdss-gd~~~~~~~~~~~~~~f~v~~-G~d---~~ 193 (300)
T 3eb2_A 127 DAVEIPVVIYTNPQFQRSDLTLDVIARLAEHP-RIRYI-------KDAS-TNTGRLLSIINRCGDALQVFS-ASA---HI 193 (300)
T ss_dssp HHCSSCEEEEECTTTCSSCCCHHHHHHHHTST-TEEEE-------EECS-SBHHHHHHHHHHHGGGSEEEE-CTT---SC
T ss_pred HHCCCCEEEEECccccCCCCCHHHHHHHHcCC-CEEEE-------EcCC-CCHHHHHHHHHHcCCCeEEEe-CcH---HH
Confidence 778999998875 4577777776432 22212 1111 134445555555555666654 421 23
Q ss_pred HHHHHHcCCCEEEechHH
Q 017718 292 VFKALALGASGIFIGRPV 309 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~ 309 (367)
++.++++||+++.-+..-
T Consensus 194 ~~~~l~~G~~G~is~~an 211 (300)
T 3eb2_A 194 PAAVMLIGGVGWMAGPAC 211 (300)
T ss_dssp HHHHHHTTCCEEEEGGGG
T ss_pred HHHHHhCCCCEEEeChhh
Confidence 577899999999988743
No 275
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.29 E-value=1.7 Score=40.43 Aligned_cols=179 Identities=18% Similarity=0.182 Sum_probs=103.8
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-. -.+.+.-..+.+-.-+.|+...+ + +..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 4556676433 33434444666677778875433 3 34556666522 22 22 45666654 3566777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 87 i~la~~a~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~ia 124 (292)
T 3daq_A 87 IQASIQAKALGADAIMLI--TPYY-----------------NKTN-------------QRGLVK----------HFEAIA 124 (292)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 789999999999999873 2321 0000 001111 234676
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC-CCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. ..+-+=... ..+..+.++.+..++ ++.|+ +|. ..
T Consensus 125 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~ss--------gd~~~~~~~~~~~~~~~f~v~-~G~---d~ 191 (292)
T 3daq_A 125 DAVKLPVVLYNVPSRTNMTIEPETVEILSQHP-YIVALKDAT--------NDFEYLEEVKKRIDTNSFALY-SGN---DD 191 (292)
T ss_dssp HHHCSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECC--------CCHHHHHHHHTTSCTTTSEEE-ESC---GG
T ss_pred HhCCCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEEEeCC--------CCHHHHHHHHHHCCCCCEEEE-ECC---HH
Confidence 778999998875 5678877777643 222221111 134556666655554 56554 343 34
Q ss_pred HHHHHHHcCCCEEEechH
Q 017718 291 DVFKALALGASGIFIGRP 308 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~ 308 (367)
.++.++++||+++.-+..
T Consensus 192 ~~~~~l~~G~~G~is~~~ 209 (292)
T 3daq_A 192 NVVEYYQRGGQGVISVIA 209 (292)
T ss_dssp GHHHHHHTTCCEEEESGG
T ss_pred HHHHHHhcCCCEEEeCHH
Confidence 477889999999998874
No 276
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=94.28 E-value=0.12 Score=49.45 Aligned_cols=106 Identities=19% Similarity=0.202 Sum_probs=62.3
Q ss_pred HHHH--HHcCCcEEEEcCCCCCC----C------CCccchHHHHHHHHHHhcCCCcEE-EecCCCCHHHHHHH----HHc
Q 017718 236 ARIA--VQAGAAGIIVSNHGARQ----L------DYVPATIMALEEVVKATQGRIPVF-LDGGVRRGTDVFKA----LAL 298 (367)
Q Consensus 236 a~~~--~~~G~d~i~vs~~gg~~----~------~~~~~~~~~l~~i~~~~~~~~~vi-a~GGI~~~~dv~ka----l~l 298 (367)
++.+ .+.|+|.+-+--.|-.. + +......+...++.+.. .+|+| .+||+ +.++..+. +..
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~fl~~v~~A~~a 270 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELFQETLVFAHKA 270 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHHHHHHHHHHHH
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHHHHHHHHHHHc
Confidence 4555 57799999985333110 1 11112234455655544 79965 69998 56666654 457
Q ss_pred CC--CEEEechHHHHHhhccChHHHHHHHHHHHHHHHHHHHHhCCCChhhhcccc
Q 017718 299 GA--SGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDH 351 (367)
Q Consensus 299 GA--d~V~ig~~~l~~l~~~G~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~ 351 (367)
|| .+|.+||.+... ++..+.+.=.+..+.+|.-.|..+|++|+...
T Consensus 271 Ga~f~Gv~~GRnvwq~-------~v~~~~~~~~~~~~~~l~~~g~~~i~~l~~v~ 318 (332)
T 3iv3_A 271 GAKFNGVLCGRATWAG-------SVQVYMEEGKEAARQWLRTSGLQNINELNKVL 318 (332)
T ss_dssp TCCCCEEEECHHHHTT-------HHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCCcceEEeeHHHHHh-------hhhhhccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99 999999977542 22223333234456666666777777766443
No 277
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=94.27 E-value=3.6 Score=38.61 Aligned_cols=178 Identities=15% Similarity=0.140 Sum_probs=99.7
Q ss_pred ceEeCcc-cchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 73 PIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 73 Pi~iAPm-~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
|.++.|+ .-.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.||-. +. .. -|.+...- . +-+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~-st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIG-Y-SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCC-c-CHHH
Confidence 4445665 322223333334666666778876543 2 34556766532 22 22 45666664 3 6666
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~v 132 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIH--QPVH-----------------PYIT-------------DAGAVE----------YYRNI 132 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCC-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 7788999999999999873 3321 0000 001111 22466
Q ss_pred HhhcCCCEEEEe---cCCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC--CCcEEEecCCCCHH-
Q 017718 218 QTITKLPILVKG---VLTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG--RIPVFLDGGVRRGT- 290 (367)
Q Consensus 218 ~~~~~~Pv~vK~---v~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~--~~~via~GGI~~~~- 290 (367)
.+.+++||++=. +.+++...++.+.. +-+|--+ . ..+..+.++.+..++ ++.| .+| +..
T Consensus 133 a~a~~lPiilYn~tg~l~~~~~~~La~~pnIvgiKds--s--------gd~~~~~~~~~~~~~~~~f~v-~~G---~d~~ 198 (314)
T 3d0c_A 133 IEALDAPSIIYFKDAHLSDDVIKELAPLDKLVGIKYA--I--------NDIQRVTQVMRAVPKSSNVAF-ICG---TAEK 198 (314)
T ss_dssp HHHSSSCEEEEECCTTSCTHHHHHHTTCTTEEEEEEC--C--------CCHHHHHHHHHHSCGGGCCEE-EET---THHH
T ss_pred HHhCCCCEEEEeCCCCcCHHHHHHHHcCCCEEEEEeC--C--------CCHHHHHHHHHhcCCCCCEEE-EEe---CcHH
Confidence 677899999854 25667776665432 2222221 1 134455566655544 5555 445 234
Q ss_pred HHHHHHHcCCCEEEechH
Q 017718 291 DVFKALALGASGIFIGRP 308 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~ 308 (367)
.++.++.+||+++.-+..
T Consensus 199 ~~~~~l~~G~~G~is~~a 216 (314)
T 3d0c_A 199 WAPFFYHAGAVGFTSGLV 216 (314)
T ss_dssp HHHHHHHHTCCEEEESGG
T ss_pred HHHHHHHcCCCEEEecHH
Confidence 578889999999998874
No 278
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=94.20 E-value=0.51 Score=45.77 Aligned_cols=118 Identities=12% Similarity=0.016 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++-+.+.... .+ .+.
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~--~~--------------------------------------------~~~ 181 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDS--LS--------------------------------------------ISI 181 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSS--HH--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCh--HH--------------------------------------------HHH
Confidence 57787888888888999998877543100 00 001
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ ++||.++.- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+++
T Consensus 182 e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~d 251 (391)
T 2qgy_A 182 QFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEE--------PVDGENISLLTEIKNTF--NMKVVTG 251 (391)
T ss_dssp HHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSCEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeC--------CCChhhHHHHHHHHhhC--CCCEEEc
Confidence 123666665 588888754 35554 45667788887642 01234677888888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEec
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
+.+.+..++.+++..| +|.|++-
T Consensus 252 E~~~~~~~~~~~i~~~~~d~v~ik 275 (391)
T 2qgy_A 252 EKQSGLVHFRELISRNAADIFNPD 275 (391)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCB
T ss_pred CCcCCHHHHHHHHHcCCCCEEEEC
Confidence 9999999999999987 8999984
No 279
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.18 E-value=4 Score=38.83 Aligned_cols=180 Identities=17% Similarity=0.197 Sum_probs=101.3
Q ss_pred cceEeCcccchhccCChhhHHHHHHHHHcCCcee--ecC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
.|.++.|+.-.+-.+.+.-..+.+-..+.|+... .+| ..+.+.||-. +. .. -|.+...- ..+-+.
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 4566777743332333333456666667787533 333 3456666522 22 22 35666654 346666
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.|
T Consensus 115 ai~la~~A~~~Gadavlv~--~P~Y-----------------~~~s-------------~~~l~~----------~f~~V 152 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVI--NPYY-----------------WKVS-------------EANLIR----------YFEQV 152 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCSS-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 7788999999999999874 2331 0000 001111 22366
Q ss_pred HhhcCCCEEEEec-------CCHHHHHHHH-HcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhc---CCCcEEEecC
Q 017718 218 QTITKLPILVKGV-------LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQ---GRIPVFLDGG 285 (367)
Q Consensus 218 ~~~~~~Pv~vK~v-------~~~~~a~~~~-~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~---~~~~via~GG 285 (367)
.+.+++||++=.+ .+++...++. +.. +-+|.-+ . ..+..+.++.+..+ +++.|+ +|
T Consensus 153 A~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiKds--s--------gd~~~~~~l~~~~~~~~~~f~v~-~G- 220 (343)
T 2v9d_A 153 ADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDT--I--------DSVAHLRSMIHTVKGAHPHFTVL-CG- 220 (343)
T ss_dssp HHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEEEC--C--------SCHHHHHHHHHHHHHHCTTCEEE-ES-
T ss_pred HHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEEeC--C--------CCHHHHHHHHHhcCCCCCCEEEE-EC-
Confidence 6778999998765 5678777776 542 2222221 1 12334445544443 456554 45
Q ss_pred CCCHHHHHHHHHcCCCEEEechH
Q 017718 286 VRRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 286 I~~~~dv~kal~lGAd~V~ig~~ 308 (367)
+...++.++.+||+++.-+..
T Consensus 221 --~D~~~l~~l~~Ga~G~is~~a 241 (343)
T 2v9d_A 221 --YDDHLFNTLLLGGDGAISASG 241 (343)
T ss_dssp --SGGGHHHHHHTTCCEECCGGG
T ss_pred --cHHHHHHHHHCCCCEEEeCHH
Confidence 234577889999999988874
No 280
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.18 E-value=0.14 Score=47.18 Aligned_cols=79 Identities=22% Similarity=0.349 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HH---------HHHHHHcCCCEE
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TD---------VFKALALGASGI 303 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-~d---------v~kal~lGAd~V 303 (367)
+-|+.+.++|++|+++|. .-+..+++.++... ++...||+-. .+ ..+++..|||.+
T Consensus 166 ~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad~i 231 (255)
T 3ldv_A 166 RLATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQAIASGSDYL 231 (255)
T ss_dssp HHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHHHHHcCCCEE
Confidence 346677889999999842 13455666665444 6677888742 23 567888999999
Q ss_pred EechHHHHHhhccChHHHHHHHHHHHHHH
Q 017718 304 FIGRPVVYSLAAEGEKGVRRVLEMLREEF 332 (367)
Q Consensus 304 ~ig~~~l~~l~~~G~~~v~~~i~~l~~el 332 (367)
.+||++..+ ..+ ...++.+++|+
T Consensus 232 VvGr~I~~a---~dp---~~a~~~i~~ei 254 (255)
T 3ldv_A 232 VIGRPITQA---AHP---EVVLEEINSSL 254 (255)
T ss_dssp EECHHHHTC---SCH---HHHHHHHHHHC
T ss_pred EECHHHhCC---CCH---HHHHHHHHHhh
Confidence 999998642 222 23556666654
No 281
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.15 E-value=0.21 Score=47.24 Aligned_cols=91 Identities=12% Similarity=0.173 Sum_probs=57.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-.. -..+++..+++.+ +++|||+--|=.+-.++++ +-.+|||++++-.|+
T Consensus 35 v~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~- 112 (313)
T 3dz1_A 35 TDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP- 112 (313)
T ss_dssp HHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT-
T ss_pred HHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC-
Confidence 45678899999999665442111111 1334566666777 7999998555455555553 334799999999998
Q ss_pred HHhhccChHHHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLREE 331 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~e 331 (367)
+. ..++++.++++.+.+.
T Consensus 113 ~~---~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 113 SL---RTDEQITTYFRQATEA 130 (313)
T ss_dssp TC---CSHHHHHHHHHHHHHH
T ss_pred CC---CCHHHHHHHHHHHHHh
Confidence 42 2456665555555443
No 282
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=94.13 E-value=0.6 Score=45.30 Aligned_cols=118 Identities=10% Similarity=0.015 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.++||+++=+.++.+- . +.+.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~-------~---------------------------------------~~~~e 195 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPD-------G---------------------------------------ALDIA 195 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSC-------H---------------------------------------HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCC-------H---------------------------------------HHHHH
Confidence 6777778888888999999877654210 0 0000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++
T Consensus 196 ~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE 265 (393)
T 2og9_A 196 RVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFNLVWIEE--------PLDAYDHEGHAALALQF--DTPIATGE 265 (393)
T ss_dssp HHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEECT
T ss_pred HHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhC--CCCEEeCC
Confidence 123666665 578888743 35555 45566778887641 11234677788888776 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEech
Q 017718 285 GVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 285 GI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+.+..++.+++..| +|.|++--
T Consensus 266 ~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 266 MLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CcCCHHHHHHHHHCCCCCEEeeCc
Confidence 999999999999987 89998864
No 283
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=94.06 E-value=0.15 Score=47.97 Aligned_cols=82 Identities=20% Similarity=0.192 Sum_probs=59.5
Q ss_pred hhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC--CCCCc---cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHH
Q 017718 219 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR--QLDYV---PATIMALEEVVKATQGRIPVFLDGGVRRGTDVF 293 (367)
Q Consensus 219 ~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~--~~~~~---~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ 293 (367)
+..+.-| +..+.+++.|+...++||+.|.+--..-+ ...+| ....+.|.++++.+ .+||++-+++..-.++.
T Consensus 18 ~~~kggv-~~d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide~q 94 (297)
T 4adt_A 18 EMLKGGV-IMDVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFVEAQ 94 (297)
T ss_dssp HTTTTCE-EEEESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHHHHH
T ss_pred HHhcCCc-ccCCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHHHHH
Confidence 3334344 45778899999999999999988521110 01111 24678888888877 89999998888877777
Q ss_pred HHHHcCCCEE
Q 017718 294 KALALGASGI 303 (367)
Q Consensus 294 kal~lGAd~V 303 (367)
.+.++|||.|
T Consensus 95 il~aaGAD~I 104 (297)
T 4adt_A 95 ILEELKVDML 104 (297)
T ss_dssp HHHHTTCSEE
T ss_pred HHHHcCCCEE
Confidence 7788999999
No 284
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.04 E-value=0.046 Score=51.44 Aligned_cols=90 Identities=18% Similarity=0.208 Sum_probs=55.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCc-cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYV-PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~-~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-. .-..+++..+++.+++++|||+--|=.+-.++++ +-.+|||++++..|+.
T Consensus 31 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (300)
T 3eb2_A 31 CDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAY 110 (300)
T ss_dssp HHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 4567889999999866544211111 1133456666666777899998444444555443 3347999999999987
Q ss_pred HHhhccChHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l 328 (367)
+.. .++++.++++.+
T Consensus 111 ~~~---~~~~l~~~f~~v 125 (300)
T 3eb2_A 111 FPL---KDAQIESYFRAI 125 (300)
T ss_dssp SCC---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 642 345544444443
No 285
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=93.98 E-value=0.12 Score=50.01 Aligned_cols=89 Identities=20% Similarity=0.254 Sum_probs=55.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+++.|+|+|++.|+.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|+.
T Consensus 86 v~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY 165 (360)
T 4dpp_A 86 VNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY 165 (360)
T ss_dssp HHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 56678999999999665442111111 123455666666777999998445445555553 3347999999999976
Q ss_pred HHhhccChHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEM 327 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~ 327 (367)
+. -.++++.++++.
T Consensus 166 ~k---~sq~gl~~hf~~ 179 (360)
T 4dpp_A 166 GK---TSIEGLIAHFQS 179 (360)
T ss_dssp SC---CCHHHHHHHHHT
T ss_pred CC---CCHHHHHHHHHH
Confidence 43 234554444443
No 286
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=93.94 E-value=1.6 Score=40.57 Aligned_cols=181 Identities=14% Similarity=0.144 Sum_probs=99.4
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4456676432223333334566666677875443 32 3456666522 22 22 35666654 3455666
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~ia 123 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTV--TPYY-----------------NRPS-------------QEGLYQ----------HFKAIA 123 (292)
T ss_dssp HHHHHHTTTSSCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 778888999999999873 2321 0000 001111 224666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
+.+++||++=.+ .+++...++.+. ..|+-- .+.. ..+..+.++.+..++++.|+ +| +...
T Consensus 124 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~--pnivgi------K~s~-gd~~~~~~~~~~~~~~f~v~-~G---~d~~ 190 (292)
T 2ojp_A 124 EHTDLPQILYNVPSRTGCDLLPETVGRLAKV--KNIIGI------XEAT-GNLTRVNQIKELVSDDFVLL-SG---DDAS 190 (292)
T ss_dssp TTCSSCEEEECCHHHHSCCCCHHHHHHHHTS--TTEEEC-------CCS-CCTHHHHHHHTTSCTTSBCE-ES---CGGG
T ss_pred HhcCCCEEEEeCcchhccCCCHHHHHHHHcC--CCEEEE------eCCC-CCHHHHHHHHHhcCCCEEEE-EC---cHHH
Confidence 778999998764 567877777654 333210 1111 12334445554444456554 44 2344
Q ss_pred HHHHHHcCCCEEEechHH
Q 017718 292 VFKALALGASGIFIGRPV 309 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~ 309 (367)
++.++.+||+++.-+..-
T Consensus 191 ~~~~l~~G~~G~is~~~n 208 (292)
T 2ojp_A 191 ALDFMQYGGHGVISVTAN 208 (292)
T ss_dssp HHHHHHTTCCEEEESGGG
T ss_pred HHHHHHCCCcEEEeCHHH
Confidence 678899999999988743
No 287
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=93.89 E-value=0.25 Score=45.85 Aligned_cols=36 Identities=31% Similarity=0.351 Sum_probs=31.0
Q ss_pred HHHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs 250 (367)
+.+|+.+++||++-.. .++++++.+.+.|+|+++|.
T Consensus 201 ~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 201 ERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4788888999999665 57999998999999999993
No 288
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=93.85 E-value=0.51 Score=45.83 Aligned_cols=120 Identities=15% Similarity=0.081 Sum_probs=84.2
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++=+.+++.. +.|+.
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~iKiKvG~~~----~~d~~----------------------------------------- 183 (389)
T 3ozy_A 149 DLTPDQAADELAGWVEQGFTAAKLKVGRAP----RKDAA----------------------------------------- 183 (389)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCH----HHHHH-----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEeeccCCCH----HHHHH-----------------------------------------
Confidence 467888888888888999999988776410 00000
Q ss_pred ccHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHH-HHhcCCCcEEE
Q 017718 212 LSWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVV-KATQGRIPVFL 282 (367)
Q Consensus 212 ~~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~-~~~~~~~~via 282 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.+++ +.+ .+||++
T Consensus 184 -~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~--~iPIa~ 252 (389)
T 3ozy_A 184 -NLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAGCYWFEE--------PLSIDDIEGHRILRAQGT--PVRIAT 252 (389)
T ss_dssp -HHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEES--------CSCTTCHHHHHHHHTTCC--SSEEEE
T ss_pred -HHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcCC--CCCEEe
Confidence 123667665 578888754 34544 46677889888741 11223567777777 554 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 253 dE~i~~~~~~~~~i~~~~~d~v~ik~ 278 (389)
T 3ozy_A 253 GENLYTRNAFNDYIRNDAIDVLQADA 278 (389)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred CCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999999976 89998854
No 289
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.85 E-value=3.7 Score=37.98 Aligned_cols=179 Identities=13% Similarity=0.150 Sum_probs=101.8
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+ .+.+.-..+.+-.-+.|+...+ | +..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 8 ~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~a 85 (291)
T 3a5f_A 8 VAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAAS 85 (291)
T ss_dssp EECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 45567775444 5555455677777778876443 3 33556666532 21 22 45666654 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+| ++.+.
T Consensus 86 i~la~~a~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~~----------f~~ia 123 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVI--TPYY-----------------NKTT-------------QKGLVKH----------FKAVS 123 (291)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHHH----------C-CTG
T ss_pred HHHHHHHHhcCCCEEEEc--CCCC-----------------CCCC-------------HHHHHHH----------HHHHH
Confidence 788999999999999874 3331 0000 0011111 12445
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|--+ . .....+.++.+..++++.| .+|. -.
T Consensus 124 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s--~--------gd~~~~~~~~~~~~~~f~v-~~G~---d~ 189 (291)
T 3a5f_A 124 DAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVXEA--S--------GNISQIAQIKALCGDKLDI-YSGN---DD 189 (291)
T ss_dssp GGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEEC--S--------CCHHHHHHHHHHHGGGSEE-EESC---GG
T ss_pred HhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEeCC--C--------CCHHHHHHHHHhcCCCeEE-EeCc---HH
Confidence 667899998764 5677777776542 2222221 1 1234445555555445655 4452 34
Q ss_pred HHHHHHHcCCCEEEechHH
Q 017718 291 DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~ 309 (367)
-++.++.+||+++.-+..-
T Consensus 190 ~~~~~l~~G~~G~is~~an 208 (291)
T 3a5f_A 190 QIIPILALGGIGVISVLAN 208 (291)
T ss_dssp GHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHCCCCEEEecHHH
Confidence 4678899999999988753
No 290
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=93.82 E-value=0.18 Score=46.47 Aligned_cols=80 Identities=25% Similarity=0.460 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----H------HHHHHHcCCCEE
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----D------VFKALALGASGI 303 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~----d------v~kal~lGAd~V 303 (367)
+-|+.+.++|+||+++|. - -+..+++.++.. .++...||+-.. | +.+++..|||.+
T Consensus 148 ~~A~~a~~~G~dGvV~s~----------~---e~~~ir~~~~~~-f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~i 213 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICSP----------L---EVKKLHENIGDD-FLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAI 213 (259)
T ss_dssp HHHHHHHHTTCCEEECCG----------G---GHHHHHHHHCSS-SEEEECCCCCC-----------CHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEEEECH----------H---HHHHHHhhcCCc-cEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEE
Confidence 346777889999999841 1 234455555433 367889998543 2 678889999999
Q ss_pred EechHHHHHhhccChHHHHHHHHHHHHHHH
Q 017718 304 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 304 ~ig~~~l~~l~~~G~~~v~~~i~~l~~el~ 333 (367)
.+||++..+ ..+ ...++.++++++
T Consensus 214 VvGr~I~~a---~dp---~~a~~~i~~~~~ 237 (259)
T 3tfx_A 214 VVGRPITLA---SDP---KAAYEAIKKEFN 237 (259)
T ss_dssp EECHHHHTS---SSH---HHHHHHHHHHHT
T ss_pred EEChHHhCC---CCH---HHHHHHHHHHHH
Confidence 999987642 222 235566666644
No 291
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.78 E-value=4.5 Score=37.98 Aligned_cols=180 Identities=14% Similarity=0.101 Sum_probs=105.6
Q ss_pred cceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
.|.++.|+.-.+-.+.+.-..+.+-..+.|+...+ + +..+.+.+|-. +. .. -|.+...- ..+-+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 35566777433333333344667777778876443 3 33556666522 21 22 45666654 356667
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+
T Consensus 108 ai~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~v 145 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVL--PISY-----------------WKLN-------------EAEVFQ----------HYRAV 145 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CCCS-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 7788999999999999872 2321 1000 001111 12467
Q ss_pred HhhcCCCEEEEec-------CCHHHHHHH-HHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017718 218 QTITKLPILVKGV-------LTAEDARIA-VQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 288 (367)
Q Consensus 218 ~~~~~~Pv~vK~v-------~~~~~a~~~-~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~ 288 (367)
.+.+++||++=.+ .+++...++ .+.. +-+|--+ . ..+..+.++.+..++++.|+. |.
T Consensus 146 a~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKds--s--------gd~~~~~~~~~~~~~~f~v~~-G~--- 211 (315)
T 3na8_A 146 GEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKES--T--------GDIQRMHKLRLLGEGRVPFYN-GC--- 211 (315)
T ss_dssp HHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEEC--S--------SCHHHHHHHHHHTTTCSCEEE-CC---
T ss_pred HHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECC--C--------CCHHHHHHHHHHcCCCEEEEe-Cc---
Confidence 7778999998875 567777777 5543 2222221 1 134455566666655677665 42
Q ss_pred HHHHHHHHHcCCCEEEechH
Q 017718 289 GTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig~~ 308 (367)
..-++.++++||+++.-+..
T Consensus 212 D~~~l~~l~~G~~G~is~~a 231 (315)
T 3na8_A 212 NPLALEAFVAGAKGWCSAAP 231 (315)
T ss_dssp GGGHHHHHHHTCSEEEESGG
T ss_pred hHHHHHHHHCCCCEEEechh
Confidence 23467889999999998874
No 292
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.76 E-value=4.2 Score=37.59 Aligned_cols=177 Identities=19% Similarity=0.210 Sum_probs=100.5
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+. .+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 44566775 5444444444666667778876443 33 3455666522 22 22 35555654 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 85 i~la~~a~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~ia 122 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI--TPYY-----------------NKPT-------------QEGLRK----------HFGKVA 122 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999874 2331 0000 001111 234666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHH-HcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAV-QAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~-~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.+++||++=.+ .+++...++. +.. +-+|--+ .| .+..+.++.+.. ++.| .+|. -
T Consensus 123 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s--~g--------d~~~~~~~~~~~--~f~v-~~G~---d 186 (289)
T 2yxg_A 123 ESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEA--NP--------NLSQVSELIHDA--KITV-LSGN---D 186 (289)
T ss_dssp HHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEEC--CS--------CTHHHHHHHHHT--CSEE-EESC---G
T ss_pred HhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeC--CC--------CHHHHHHHHHhC--CeEE-EECc---H
Confidence 778999998764 5678777776 542 2222221 11 223344454443 5555 4452 3
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
.-++.++.+||+++.-+..-
T Consensus 187 ~~~~~~l~~G~~G~is~~~n 206 (289)
T 2yxg_A 187 ELTLPIIALGGKGVISVVAN 206 (289)
T ss_dssp GGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHCCCCEEEeChhh
Confidence 44778899999999988753
No 293
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.73 E-value=0.89 Score=42.73 Aligned_cols=114 Identities=17% Similarity=0.125 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHcCCcEEEEcC---CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEEec
Q 017718 231 LTAEDARIAVQAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIFIG 306 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~-~dv~kal~lGAd~V~ig 306 (367)
.++++|+...+.|+|.+-++. ||-+....-.-.++.|.+|.+.++.++|+..=||=..+ +++.+++.+|..-|=|+
T Consensus 172 T~Peea~~Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~KiNi~ 251 (306)
T 3pm6_A 172 TTPEESEEFVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVAKVNVN 251 (306)
T ss_dssp CCHHHHHHHHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEEEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCeEEEeC
Confidence 578999888899999998863 55442112233788999999888557999998865444 56889999999999999
Q ss_pred hHHHHHhhc--------cCh-HHHHHHHHHHHHHHHHHHHHhCCCCh
Q 017718 307 RPVVYSLAA--------EGE-KGVRRVLEMLREEFELAMALSGCRSL 344 (367)
Q Consensus 307 ~~~l~~l~~--------~G~-~~v~~~i~~l~~el~~~m~~~G~~si 344 (367)
|-+..+... ..+ .-+....+.+++.++..|..+|...-
T Consensus 252 Tdl~~a~~~~~r~~~~~~~~~~~~~~~~~a~~~~v~~~i~~fgs~gk 298 (306)
T 3pm6_A 252 RAVNNEYVKVMREKAGSLPITRLHEEVTNAMQAAVEKIMDMIDSTGK 298 (306)
T ss_dssp HHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTTCTTG
T ss_pred hHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 976543211 011 12333456678888889999997653
No 294
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.71 E-value=0.11 Score=47.24 Aligned_cols=59 Identities=22% Similarity=0.292 Sum_probs=42.8
Q ss_pred HHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH----------HHHHHHHcCCCEEEechH
Q 017718 239 AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT----------DVFKALALGASGIFIGRP 308 (367)
Q Consensus 239 ~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~----------dv~kal~lGAd~V~ig~~ 308 (367)
..+.|.++++.+ ..+ +.++++..+ +.+++.+|||+-.. .+.+++..|||.+.+||+
T Consensus 158 ~~~~G~~g~V~~------------~~e-i~~lr~~~~-~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aGad~iVvGr~ 223 (245)
T 1eix_A 158 TQKCGLDGVVCS------------AQE-AVRFKQVFG-QEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAGVDYMVIGRP 223 (245)
T ss_dssp HHHTTCSEEECC------------GGG-HHHHHHHHC-SSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTTCSEEEECHH
T ss_pred HHHcCCCeEEeC------------HHH-HHHHHHhcC-CCCEEEECCcCCCCCCccchhccCCHHHHHHcCCCEEEECHH
Confidence 567888887653 223 556665553 46899999998431 366778899999999999
Q ss_pred HHH
Q 017718 309 VVY 311 (367)
Q Consensus 309 ~l~ 311 (367)
++.
T Consensus 224 I~~ 226 (245)
T 1eix_A 224 VTQ 226 (245)
T ss_dssp HHT
T ss_pred HcC
Confidence 874
No 295
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.67 E-value=0.29 Score=44.91 Aligned_cols=70 Identities=27% Similarity=0.323 Sum_probs=54.6
Q ss_pred CCHHHHHHHHHcCCcEEEEcCC---CCCCCCCccchHHHHHHHHHHhcCCCcEEE-----ecCCCCH--------HHHHH
Q 017718 231 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVFK 294 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~~---gg~~~~~~~~~~~~l~~i~~~~~~~~~via-----~GGI~~~--------~dv~k 294 (367)
.+.++|..|.+.|||-|-+-.. ||. .|+...+..+++.+ ++||.+ .|++... .|+..
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGl-----TPS~g~i~~~~~~~--~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~ 81 (256)
T 1twd_A 9 YSMECALTAQQNGADRVELCAAPKEGGL-----TPSLGVLKSVRQRV--TIPVHPIIRPRGGDFCYSDGEFAAILEDVRT 81 (256)
T ss_dssp SSHHHHHHHHHTTCSEEEECBCGGGTCB-----CCCHHHHHHHHHHC--CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCC-----CCCHHHHHHHHHHc--CCceEEEECCCCCCCcCCHHHHHHHHHHHHH
Confidence 7899999999999999998542 443 35667777777776 789888 5666554 36777
Q ss_pred HHHcCCCEEEech
Q 017718 295 ALALGASGIFIGR 307 (367)
Q Consensus 295 al~lGAd~V~ig~ 307 (367)
+..+|||+|.+|-
T Consensus 82 ~~~~GadGvV~G~ 94 (256)
T 1twd_A 82 VRELGFPGLVTGV 94 (256)
T ss_dssp HHHTTCSEEEECC
T ss_pred HHHcCCCEEEEee
Confidence 7889999999994
No 296
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=93.67 E-value=4.4 Score=37.56 Aligned_cols=180 Identities=18% Similarity=0.173 Sum_probs=103.0
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hhCC--CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------STGP--GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~~~--~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +... -|.+...- ..+-+..
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 4456666422223333334666666778876443 33 3456666532 2222 35666664 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcccc-ccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL-KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
.++.+.|+++|++++.+. .|.. .. .+ ..++.+ .++.+
T Consensus 88 i~la~~A~~~Gadavlv~--~P~y-----------------~~~~s-------------~~~l~~----------~f~~v 125 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLA--PPSY-----------------FKNVS-------------DDGLFA----------WFSAV 125 (294)
T ss_dssp HHHHHHHHHTTCSEEEEC--CCCS-----------------SCSCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHhcCCCEEEEc--CCcC-----------------CCCCC-------------HHHHHH----------HHHHH
Confidence 789999999999999873 3321 10 00 001111 23467
Q ss_pred Hhhc---CCCEEEEec-------CCHHHHHHHH-HcC--CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 218 QTIT---KLPILVKGV-------LTAEDARIAV-QAG--AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 218 ~~~~---~~Pv~vK~v-------~~~~~a~~~~-~~G--~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
.+.+ ++||++=.+ .+++...++. +.. +-+|--+. ..+..+.++.+..+ ++.|+ +|
T Consensus 126 a~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgiKds~----------gd~~~~~~~~~~~~-~f~v~-~G 193 (294)
T 3b4u_A 126 FSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSS----------GNWSHTERLLKEHG-DLAIL-IG 193 (294)
T ss_dssp HHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEEEECC----------CCHHHHHHHHHHHT-TSEEE-EC
T ss_pred HHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEEEECC----------CCHHHHHHHHHhCC-CeEEE-Ec
Confidence 7778 899998764 5678777776 542 22333221 13444555555554 55554 45
Q ss_pred CCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 285 GVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 285 GI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+...++.++.+||+++.-+..-+
T Consensus 194 ---~d~~~l~~l~~G~~G~is~~~n~ 216 (294)
T 3b4u_A 194 ---DERDLARGVRLGGQGAISGVANF 216 (294)
T ss_dssp ---CHHHHHHHHHTTCCEEEESGGGT
T ss_pred ---cHHHHHHHHHCCCCEEEeCHHHh
Confidence 34567788999999999887543
No 297
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=93.66 E-value=0.19 Score=50.44 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.+..+.++|+|.|.++...|. ....++.+.++++.++ .+||++ |++.+.+++.++..+|||++.++
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~----~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH----SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS----SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEecCCc----hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHHcCCCEEEEc
Confidence 56788999999999999542221 1246778888888764 588887 78899999999999999999984
No 298
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.64 E-value=0.14 Score=49.09 Aligned_cols=88 Identities=14% Similarity=0.148 Sum_probs=51.7
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 311 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l~ 311 (367)
++.+++.|+|+|++.++.|-...-.......+-+. .+.+++|||+--|=.+-.++++ +-.+|||++++-.|+++
T Consensus 53 v~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~ 130 (344)
T 2hmc_A 53 GKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLS 130 (344)
T ss_dssp HHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred HHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccC
Confidence 45678899999999665442111111112222233 3456899998555445455543 33479999999999876
Q ss_pred H-hhccChHHHHHHHHHH
Q 017718 312 S-LAAEGEKGVRRVLEML 328 (367)
Q Consensus 312 ~-l~~~G~~~v~~~i~~l 328 (367)
. . .++++.++++.+
T Consensus 131 ~~~---s~~~l~~~f~~I 145 (344)
T 2hmc_A 131 RGS---VIAAQKAHFKAI 145 (344)
T ss_dssp STT---CHHHHHHHHHHH
T ss_pred CCC---CHHHHHHHHHHH
Confidence 3 2 345555444444
No 299
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.50 E-value=4.8 Score=37.44 Aligned_cols=178 Identities=14% Similarity=0.151 Sum_probs=103.1
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-C--CCceEEEEeecCCHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-G--PGIRFFQLYVYKDRNV 137 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~--~~~~~~QLy~~~d~~~ 137 (367)
|.++.|+ -.+-.+.+.-..+.+-.-+.|+...+ + +..+.+.||-. +. . .-|.+...- ..+-..
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHH
Confidence 4456666 33333434444667777778876443 3 33455666522 22 2 235555553 346677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+
T Consensus 92 ai~la~~a~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~v 129 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSV--APYY-----------------NKPT-------------QQGLYE----------HYKAI 129 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 7788999999999999873 2321 0000 001111 23467
Q ss_pred HhhcCCCEEEEec-------CCHHHHHHHHHc-C-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017718 218 QTITKLPILVKGV-------LTAEDARIAVQA-G-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 288 (367)
Q Consensus 218 ~~~~~~Pv~vK~v-------~~~~~a~~~~~~-G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~ 288 (367)
.+.+++||++=.+ .+++...++.+. . +-+|--+. ..+..+.++.+.. +++.|+ +|.
T Consensus 130 a~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss----------gd~~~~~~~~~~~-~~f~v~-~G~--- 194 (301)
T 3m5v_A 130 AQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS----------GNIDKCVDLLAHE-PRMMLI-SGE--- 194 (301)
T ss_dssp HHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS----------SCHHHHHHHHHHC-TTSEEE-ECC---
T ss_pred HHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC----------CCHHHHHHHHHhC-CCeEEE-Ecc---
Confidence 7778999998775 567887777775 2 33333221 1344455565555 466654 452
Q ss_pred HHHHHHHHHcCCCEEEechHH
Q 017718 289 GTDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig~~~ 309 (367)
...++.++.+||+++.-+..-
T Consensus 195 d~~~~~~l~~G~~G~is~~~n 215 (301)
T 3m5v_A 195 DAINYPILSNGGKGVISVTSN 215 (301)
T ss_dssp GGGHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHHHcCCCEEEehHHH
Confidence 344778899999999988743
No 300
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=93.36 E-value=0.14 Score=47.85 Aligned_cols=76 Identities=17% Similarity=0.274 Sum_probs=49.6
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVV 310 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l 310 (367)
++.+.+.|+|+|++.++.|-...-.. -..+++..+++.+.+++|||+--|=.+-.++++ +-.+|||++++-.|++
T Consensus 28 v~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 28 IEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp HHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 46678899999999765442111111 133455666666677899998555445555553 3347999999999986
Q ss_pred H
Q 017718 311 Y 311 (367)
Q Consensus 311 ~ 311 (367)
+
T Consensus 108 ~ 108 (291)
T 3a5f_A 108 N 108 (291)
T ss_dssp S
T ss_pred C
Confidence 5
No 301
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=93.35 E-value=0.22 Score=45.27 Aligned_cols=80 Identities=24% Similarity=0.366 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH-H---------HHHHHHcCCCEE
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT-D---------VFKALALGASGI 303 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~-d---------v~kal~lGAd~V 303 (367)
+-|+.+.++|++|+++|. .+ ...+++.++.+. ++...||+-.. + ..+++..|||.+
T Consensus 148 ~~A~~a~~~g~~GvV~s~------------~e-~~~ir~~~~~~f-l~vtPGIr~~g~~~~dQ~rv~t~~~~~~aGad~l 213 (239)
T 3tr2_A 148 RMATLAKSAGLDGVVCSA------------QE-AALLRKQFDRNF-LLVTPGIRLETDEKGDQKRVMTPRAAIQAGSDYL 213 (239)
T ss_dssp HHHHHHHHHTCCEEECCH------------HH-HHHHHTTCCTTS-EEEECCBC----------CCBCHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEECc------------hh-HHHHHHhcCCCc-EEECCCcCCCCCCcCcccccCCHHHHHHcCCCEE
Confidence 346777888999999842 11 133444443334 77889998433 2 557888999999
Q ss_pred EechHHHHHhhccChHHHHHHHHHHHHHHH
Q 017718 304 FIGRPVVYSLAAEGEKGVRRVLEMLREEFE 333 (367)
Q Consensus 304 ~ig~~~l~~l~~~G~~~v~~~i~~l~~el~ 333 (367)
.+||+++.+ ..+ ...++.+++|+.
T Consensus 214 VvGr~I~~a---~dp---~~a~~~i~~~i~ 237 (239)
T 3tr2_A 214 VIGRPITQS---TDP---LKALEAIDKDIK 237 (239)
T ss_dssp EECHHHHTS---SSH---HHHHHHHHHHC-
T ss_pred EEChHHhCC---CCH---HHHHHHHHHHHh
Confidence 999997642 222 234556666543
No 302
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=93.34 E-value=2 Score=39.94 Aligned_cols=88 Identities=17% Similarity=0.305 Sum_probs=52.9
Q ss_pred hcCCCEEEEecC--CHH----HHHHHHHcCCcEEEEcCCCCCCCCCc--cchHHHHHHHHHHhcCCCcEEEecCC-----
Q 017718 220 ITKLPILVKGVL--TAE----DARIAVQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVFLDGGV----- 286 (367)
Q Consensus 220 ~~~~Pv~vK~v~--~~~----~a~~~~~~G~d~i~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~~~via~GGI----- 286 (367)
.+++||++|..+ +++ .++.+.+.|-+-|++--.|- ..... ...+..++.+++..+ .+||+.|..=
T Consensus 132 ~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~-~y~~~~~~vdl~~i~~lk~~~~-~~pV~~D~sHs~q~p 209 (285)
T 3sz8_A 132 KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGS-SFGYDNLVVDMLGFRQMAETTG-GCPVIFDVTHSLQCR 209 (285)
T ss_dssp HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCE-ECSSSCEECCTTHHHHHHHHTT-SCCEEEETTTTCC--
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCC-CCCCCcCccCHHHHHHHHHhCC-CCCEEEeCCCccccC
Confidence 367899999874 443 36667788988777743232 22111 124556776766541 4899986321
Q ss_pred ------CCH------HHHHHHHHcCCCEEEechHH
Q 017718 287 ------RRG------TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 287 ------~~~------~dv~kal~lGAd~V~ig~~~ 309 (367)
..| .-...|.++|||+++|=+-+
T Consensus 210 ~~~~~~s~G~r~~v~~~a~AAvA~GA~gl~IE~H~ 244 (285)
T 3sz8_A 210 DPLGDASGGRRRQVLDLARAGIAVGIAGLFLEAHP 244 (285)
T ss_dssp -------------HHHHHHHHHHHCCSEEEEEEES
T ss_pred CCcCCCCCCchhhHHHHHHHHHHhCCCEEEEEecc
Confidence 123 23456888999999997643
No 303
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.33 E-value=0.23 Score=46.30 Aligned_cols=72 Identities=26% Similarity=0.325 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE-----ecCCCCH--------HHHHHHHH
Q 017718 231 LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-----DGGVRRG--------TDVFKALA 297 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via-----~GGI~~~--------~dv~kal~ 297 (367)
.+.+++..+.+.|||.|-+-.. ....+-.|+...+..+++.+ ++||.+ .|++... .|+..+..
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~--l~~GGlTPS~g~i~~a~~~~--~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSG--LSEGGTTPSMGVLQVVKQSV--QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBC--GGGTCBCCCHHHHHHHHTTC--CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCC--CCCCCCCCCHHHHHHHHHhc--CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 7899999999999999998532 11112235666777776655 688888 4445544 79999999
Q ss_pred cCCCEEEec
Q 017718 298 LGASGIFIG 306 (367)
Q Consensus 298 lGAd~V~ig 306 (367)
+|||+|.+|
T Consensus 123 ~GAdGvVfG 131 (287)
T 3iwp_A 123 YGADGLVFG 131 (287)
T ss_dssp TTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999999
No 304
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.26 E-value=5.7 Score=37.58 Aligned_cols=183 Identities=14% Similarity=-0.001 Sum_probs=100.8
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ || ..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4455666322222333334566666677875443 33 3456666522 22 22 45666664 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.|.
T Consensus 119 i~la~~A~~~Gadavlv~--~P~Y-----------------~~~s-------------~~~l~~----------~f~~VA 156 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLA--PVSY-----------------TPLT-------------QEEAYH----------HFAAVA 156 (332)
T ss_dssp HHHHHHHHHHTCSEEEEC--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999873 2321 1000 001111 224666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.+++||++=.+ .+++...++.+.. +-+|--+. | .. ..+..+.++++..++++.|+ +| +.
T Consensus 157 ~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdss--g-----d~~~~~~~~~~l~~~~~~~f~v~-~G---~D 225 (332)
T 2r8w_A 157 GATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPL--P-----ADADYAGELARLRPKLSDDFAIG-YS---GD 225 (332)
T ss_dssp HHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECC--C-----TTCCHHHHHHHHTTTSCTTCEEE-EC---CH
T ss_pred HhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCC--C-----CchhHHHHHHHHHHhcCCCEEEE-eC---ch
Confidence 778999998764 5678777776542 22222211 1 00 01445555554444445444 45 34
Q ss_pred HHHHHHHHcCCCEEEechHH
Q 017718 290 TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~ 309 (367)
.-++.++.+||+++.-+..-
T Consensus 226 ~~~l~~l~~G~~G~is~~an 245 (332)
T 2r8w_A 226 WGCTDATLAGGDTWYSVVAG 245 (332)
T ss_dssp HHHHHHHHTTCSEEEESGGG
T ss_pred HHHHHHHHCCCCEEEeCHHH
Confidence 56788899999999988743
No 305
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=93.26 E-value=0.14 Score=46.46 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=49.0
Q ss_pred HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH----------HHHHHHcCCCEEEec
Q 017718 237 RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD----------VFKALALGASGIFIG 306 (367)
Q Consensus 237 ~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d----------v~kal~lGAd~V~ig 306 (367)
..+.+.|.++++.+. +.+.++++..+ ..+++.+|||+-... ..+++..|||.+.+|
T Consensus 149 ~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~~~~~~~~dq~rv~tp~~a~~aGad~iVvG 214 (239)
T 1dbt_A 149 KQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVG 214 (239)
T ss_dssp HHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBCCTTSCCTTCSSCBCHHHHHHTTCSEEEEC
T ss_pred HHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcCCCCCCccceeccCCHHHHHHcCCCEEEEC
Confidence 335678888876631 23344444443 468999999986443 367889999999999
Q ss_pred hHHHHHhhccChHHHHHHHHHHHHHH
Q 017718 307 RPVVYSLAAEGEKGVRRVLEMLREEF 332 (367)
Q Consensus 307 ~~~l~~l~~~G~~~v~~~i~~l~~el 332 (367)
|+++.+ .. ....++.+++++
T Consensus 215 r~I~~a---~d---p~~a~~~l~~~i 234 (239)
T 1dbt_A 215 RSITKA---ED---PVKAYKAVRLEW 234 (239)
T ss_dssp HHHHTS---SC---HHHHHHHHHHHH
T ss_pred hhhcCC---CC---HHHHHHHHHHHH
Confidence 998742 12 234555555554
No 306
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=93.22 E-value=0.91 Score=44.10 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.+.||+++=+.++.+- . +.+.
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~-------~---------------------------------------~~d~e 208 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQPN-------C---------------------------------------AEDIR 208 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSC-------H---------------------------------------HHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCCCC-------H---------------------------------------HHHHH
Confidence 6777777888888999999887654210 0 0000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++
T Consensus 209 ~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE 278 (398)
T 2pp0_A 209 RLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFNLIWIEE--------PLDAYDIEGHAQLAAAL--DTPIATGE 278 (398)
T ss_dssp HHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGTCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEECT
T ss_pred HHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCceeeC--------CCChhhHHHHHHHHhhC--CCCEEecC
Confidence 123666665 578888753 35555 44566678776531 11234677788888776 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEech
Q 017718 285 GVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 285 GI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+.+..++.+++..| +|.|++--
T Consensus 279 ~~~~~~~~~~~i~~~~~d~v~ik~ 302 (398)
T 2pp0_A 279 MLTSFREHEQLILGNASDFVQPDA 302 (398)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CcCCHHHHHHHHHcCCCCEEEeCc
Confidence 999999999999987 89998854
No 307
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=93.19 E-value=4 Score=38.78 Aligned_cols=119 Identities=16% Similarity=0.191 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.++++-. + .+.
T Consensus 139 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~d~ 172 (366)
T 1tkk_A 139 NSPEEMAADAENYLKQGFQTLKIKVGKDDI--A--------------------------------------------TDI 172 (366)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCH--H--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEeCCCCH--H--------------------------------------------HHH
Confidence 567777777888888999999887654100 0 000
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHH--cCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~--~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
..+.+|+.+ ++++.+..- .+.++ ++.+.+ .|++.|- +. ..+..++.+.++++.+ ++||+
T Consensus 173 ~~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa 242 (366)
T 1tkk_A 173 ARIQEIRKRVGSAVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDAT--DTPIM 242 (366)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhC--CCCEE
Confidence 122566665 477777753 34444 456667 6766553 11 1234677888888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+++.+.+..|+.+++..| +|.|++--
T Consensus 243 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 269 (366)
T 1tkk_A 243 ADESVFTPRQAFEVLQTRSADLINIKL 269 (366)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred EcCCCCCHHHHHHHHHhCCCCEEEeeh
Confidence 999999999999999976 89999964
No 308
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=93.18 E-value=1.8 Score=43.01 Aligned_cols=86 Identities=22% Similarity=0.220 Sum_probs=61.4
Q ss_pred cHHHHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 213 SWKWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 213 ~~~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
++..+|+.+++||+-|.- .+......+..+|||+|-+.-.- ++ ...+..|.+..+.+ .+.++++ ++|.++
T Consensus 99 dL~~vr~~v~lPvLrKDFI~d~~Qi~ea~~~GAD~ILLi~a~---l~--~~~l~~l~~~a~~l--gm~~LvE--vh~~eE 169 (452)
T 1pii_A 99 FLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSV---LD--DDQYRQLAAVAHSL--EMGVLTE--VSNEEE 169 (452)
T ss_dssp HHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEETTT---CC--HHHHHHHHHHHHHT--TCEEEEE--ECSHHH
T ss_pred HHHHHHHhcCCCeEEEeccCCHHHHHHHHHcCCCEEEEEccc---CC--HHHHHHHHHHHHHc--CCeEEEE--eCCHHH
Confidence 345788889999999985 45555666999999999885321 21 12333343444444 5667765 789999
Q ss_pred HHHHHHcCCCEEEech
Q 017718 292 VFKALALGASGIFIGR 307 (367)
Q Consensus 292 v~kal~lGAd~V~ig~ 307 (367)
+.+++.+||+.+++-.
T Consensus 170 ~~~A~~lga~iIGinn 185 (452)
T 1pii_A 170 QERAIALGAKVVGINN 185 (452)
T ss_dssp HHHHHHTTCSEEEEES
T ss_pred HHHHHHCCCCEEEEeC
Confidence 9999999999998864
No 309
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=93.10 E-value=0.79 Score=41.96 Aligned_cols=123 Identities=14% Similarity=0.180 Sum_probs=74.8
Q ss_pred eecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccC
Q 017718 130 YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (367)
Q Consensus 130 y~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (367)
|...+-+.+.+-++.++++|++.+++.+-.+ |
T Consensus 67 Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~------------------------------------------------d 98 (256)
T 1twd_A 67 YSDGEFAAILEDVRTVRELGFPGLVTGVLDV------------------------------------------------D 98 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCT------------------------------------------------T
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEeeECC------------------------------------------------C
Confidence 4344556777788889999999999855332 1
Q ss_pred ccccHH---HHHh-hcCCCEEEEec----CCH-HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcE
Q 017718 210 RSLSWK---WLQT-ITKLPILVKGV----LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPV 280 (367)
Q Consensus 210 ~~~~~~---~l~~-~~~~Pv~vK~v----~~~-~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~v 280 (367)
..++++ .|.+ .-+.|+.+=-. .++ +..+.+.+.|++.|-.|| +. .....-.+.|.++.+..+ ++.|
T Consensus 99 g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG--~~--~~a~~g~~~L~~Lv~~a~-~i~I 173 (256)
T 1twd_A 99 GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG--QK--SDALQGLSKIMELIAHRD-APII 173 (256)
T ss_dssp SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECT--TS--SSTTTTHHHHHHHHTSSS-CCEE
T ss_pred CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC--CC--CCHHHHHHHHHHHHHhhC-CcEE
Confidence 122222 2222 22456554332 344 346778999999998754 32 123334556666655444 7888
Q ss_pred EEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 281 FLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 281 ia~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
++-|||+. +.+.+.+..|++.+=.+
T Consensus 174 m~GgGv~~-~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 174 MAGAGVRA-ENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp EEESSCCT-TTHHHHHHHTCSEEEEC
T ss_pred EecCCcCH-HHHHHHHHcCCCeEeEC
Confidence 88888864 44555557899887754
No 310
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.07 E-value=0.23 Score=48.44 Aligned_cols=67 Identities=15% Similarity=0.304 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCcEEEEcC-CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSN-HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~-~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.++.+.++|+|+|.+.. +| + ....++.+.++++.++ ++||++ |++.+.+++.++..+|||++.+|
T Consensus 155 ~~~a~~~~~~G~d~i~i~~~~g----~-~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 155 IERVEELVKAHVDILVIDSAHG----H-STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLISVGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC----S-SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCCC----C-hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHhcCCCEEEEC
Confidence 4668888999999999831 22 1 1235667777777663 688887 77899999999999999999993
No 311
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.00 E-value=0.25 Score=49.86 Aligned_cols=244 Identities=14% Similarity=0.117 Sum_probs=131.7
Q ss_pred ccccceeeccccC-CCCCCccceeEc-CeeeccceEeCcccchhccCChhhHHHHHHHHHcCCceeecCCCCCCHHHHH-
Q 017718 42 AFSRILFRPRILI-DVSKIDMNTTVL-GFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWSTSSVEEVA- 118 (367)
Q Consensus 42 ~~~~i~l~pr~l~-~~~~vd~st~i~-g~~l~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~vs~~~~~~~e~i~- 118 (367)
.||++.|+|..-. ..+++|++|.+- +..+..|++-|||...+ +..+|.+..+.|...++.. +.++++..
T Consensus 36 t~~d~~~~p~~~~~~~~~~~~~t~lt~~i~l~iPivsa~MdtvT------e~~lAia~a~~GgiGvIh~--~~~~~~q~~ 107 (511)
T 3usb_A 36 TFDDVLLVPAKSDVLPREVSVKTVLSESLQLNIPLISAGMDTVT------EADMAIAMARQGGLGIIHK--NMSIEQQAE 107 (511)
T ss_dssp CGGGEEECCCCCCCCTTTSBCCEEEETTEEESSSEEECSCTTTC------SHHHHHHHHHHTCEEEECS--SSCHHHHHH
T ss_pred ceEEEEEECCcccccccceEeeeEeecccccCCCccccCchhhc------HHHHHHHHHhcCCceeecc--cCCHHHHHH
Confidence 4899999996542 336789998875 68899999999996543 6678888888877666642 34444322
Q ss_pred ------hhC----CCceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecC----CCCCCchhHHhhhhcCCCCccccccc
Q 017718 119 ------STG----PGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVD----TPRLGRREADIKNRFTLPPFLTLKNF 184 (367)
Q Consensus 119 ------~~~----~~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd----~p~~g~r~~~~~~~~~~p~~~~~~~~ 184 (367)
... +.+.+ + ....-..++++...+.++..+.|.=+ ..+.=...+|++.... .......+
T Consensus 108 ~V~~V~~~~~~m~~d~v~--l---~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~~--~~~~V~~v 180 (511)
T 3usb_A 108 QVDKVKRSESGVISDPFF--L---TPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQD--YSIKISDV 180 (511)
T ss_dssp HHHHHHTSSSCSSSSCCC--B---CTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTCCC--SSSBHHHH
T ss_pred HHHHhhccccccccCCEE--E---CCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhhcc--CCCcHHHh
Confidence 111 12222 1 12233556777778888888877532 1111112344442110 00000000
Q ss_pred ccc-ccCcccc-ccchhhHHHhhhcc---------Ccc----ccHH----HHHh-------hcCCCEEEEecCC---HHH
Q 017718 185 QGL-DLGKMDE-ANDSGLAAYVAGQI---------DRS----LSWK----WLQT-------ITKLPILVKGVLT---AED 235 (367)
Q Consensus 185 ~~~-~~~~~~~-~~~~~~~~~~~~~~---------d~~----~~~~----~l~~-------~~~~Pv~vK~v~~---~~~ 235 (367)
... ....... .......+.+.... +.. ++.+ .+.. ...+++.+....+ .+.
T Consensus 181 M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aavg~~~d~~er 260 (511)
T 3usb_A 181 MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFPNSAKDKQGRLLVGAAVGVTADAMTR 260 (511)
T ss_dssp CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEECSSTTHHHH
T ss_pred cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcccchhhhccceeeeeeeeeccchHHH
Confidence 000 0000000 00000011111000 011 1222 1111 0123444443322 566
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
++.+.++|+|.|++....+ .....++.+.++++..+ ++||++ |+|.+.+++.++..+|||+|.+|
T Consensus 261 a~aLveaGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAHG----HSQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhhccceEEeccccc----chhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHHhCCCEEEEC
Confidence 8889999999999964322 12345677888877653 577775 78999999999999999999874
No 312
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=92.98 E-value=0.85 Score=41.01 Aligned_cols=90 Identities=21% Similarity=0.246 Sum_probs=56.7
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEcCC--CCCC---CCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVSNH--GARQ---LDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKA 295 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~--gg~~---~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~ka 295 (367)
.++-+++-. .+.++...+...+.+.|-+-+. -|+. ....+...+..-+..+....+++|+.-|||.++.|+..+
T Consensus 116 ~GL~~ivcV-ge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~ 194 (225)
T 1hg3_A 116 VGLMTMVCS-NNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKA 194 (225)
T ss_dssp HTCEEEEEE-SSHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHH
T ss_pred CCCEEEEEe-CCHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHH
Confidence 365555543 4455556667777775554331 2222 112222233222222333457999999999999999999
Q ss_pred HHcCCCEEEechHHHH
Q 017718 296 LALGASGIFIGRPVVY 311 (367)
Q Consensus 296 l~lGAd~V~ig~~~l~ 311 (367)
...|+|++.||++++.
T Consensus 195 ~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 195 IELGTVGVLLASGVTK 210 (225)
T ss_dssp HHTTCSEEEESHHHHT
T ss_pred HhCCCCEEEeCHHHHC
Confidence 9999999999999885
No 313
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=92.96 E-value=0.94 Score=40.61 Aligned_cols=83 Identities=13% Similarity=0.141 Sum_probs=52.6
Q ss_pred HHHHhhcCCCEEEEecCC-------HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 215 KWLQTITKLPILVKGVLT-------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v~~-------~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
+.+|+.+++||.+.+..+ .+.++.+.++|+|+|++..-. ....+.+.+..+.. ...++..=...
T Consensus 73 ~~i~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~-------~~~~~~~~~~~~~~--g~~~~~~i~~~ 143 (248)
T 1geq_A 73 KEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLP-------VFHAKEFTEIAREE--GIKTVFLAAPN 143 (248)
T ss_dssp HHHHTTCCCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCC-------GGGHHHHHHHHHHH--TCEEEEEECTT
T ss_pred HHHHhhCCCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCC-------hhhHHHHHHHHHHh--CCCeEEEECCC
Confidence 378887889999877434 377999999999999994311 12223332333333 23333322345
Q ss_pred CHHHHHHHHHcCCC-EEEec
Q 017718 288 RGTDVFKALALGAS-GIFIG 306 (367)
Q Consensus 288 ~~~dv~kal~lGAd-~V~ig 306 (367)
+..+.++.+..++| .+.+.
T Consensus 144 t~~e~~~~~~~~~d~~i~~~ 163 (248)
T 1geq_A 144 TPDERLKVIDDMTTGFVYLV 163 (248)
T ss_dssp CCHHHHHHHHHHCSSEEEEE
T ss_pred CHHHHHHHHHhcCCCeEEEE
Confidence 78888999988888 55443
No 314
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=92.90 E-value=1.5 Score=38.67 Aligned_cols=79 Identities=14% Similarity=0.180 Sum_probs=51.4
Q ss_pred CCCEEEEec-CCHHHHHHHHHcCCcEEEEcCC----CCC--CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH
Q 017718 222 KLPILVKGV-LTAEDARIAVQAGAAGIIVSNH----GAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK 294 (367)
Q Consensus 222 ~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs~~----gg~--~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k 294 (367)
++|++-... .+.++...+.+..+|++.+... ||+ .+||. .++++. ..+.|+|..||+ +++.+.+
T Consensus 97 ~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~-----~l~~~~---~~~~p~~LAGGL-~peNV~~ 167 (205)
T 1nsj_A 97 RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWS-----LILPYR---DRFRYLVLSGGL-NPENVRS 167 (205)
T ss_dssp TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGG-----GTGGGG---GGSSCEEEESSC-CTTTHHH
T ss_pred CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHH-----HHHhhh---cCCCcEEEECCC-CHHHHHH
Confidence 366653322 3455555555555999998753 443 34443 333221 126799999999 6788988
Q ss_pred HHH-cCCCEEEechHH
Q 017718 295 ALA-LGASGIFIGRPV 309 (367)
Q Consensus 295 al~-lGAd~V~ig~~~ 309 (367)
++. +++.+|=+.+.+
T Consensus 168 ai~~~~p~gVDvsSGv 183 (205)
T 1nsj_A 168 AIDVVRPFAVDVSSGV 183 (205)
T ss_dssp HHHHHCCSEEEESGGG
T ss_pred HHHhcCCCEEEECCce
Confidence 887 699999999844
No 315
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=92.80 E-value=6.2 Score=36.76 Aligned_cols=178 Identities=17% Similarity=0.180 Sum_probs=99.1
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCcee--ec---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+... .| +..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 22 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~a 100 (304)
T 3cpr_A 22 VAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTS 100 (304)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHH
Confidence 445667643222333333456666667787543 33 34556766532 22 22 35666654 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 101 i~la~~A~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~ia 138 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVV--TPYY-----------------SKPS-------------QEGLLA----------HFGAIA 138 (304)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 789999999999999874 2331 0000 001111 224666
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|--+ . ..+..+.++.+.. ++.|+ +|. ..
T Consensus 139 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--s--------gd~~~~~~~~~~~--~f~v~-~G~---d~ 202 (304)
T 3cpr_A 139 AATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAVXDA--K--------GDLVAATSLIKET--GLAWY-SGD---DP 202 (304)
T ss_dssp HHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEEC--S--------CCHHHHHHHHHHH--CCEEE-ECS---GG
T ss_pred HhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecC--C--------CCHHHHHHHHHhc--CEEEE-ECc---HH
Confidence 778999998775 5678777776532 1122211 1 1234444454443 45553 452 34
Q ss_pred HHHHHHHcCCCEEEechHH
Q 017718 291 DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~ 309 (367)
-++.++.+||+++.-+..-
T Consensus 203 ~~l~~l~~G~~G~is~~an 221 (304)
T 3cpr_A 203 LNLVWLALGGSGFISVIGH 221 (304)
T ss_dssp GHHHHHHTTCCEEEESGGG
T ss_pred HHHHHHHCCCCEEEecHHH
Confidence 4678899999999888753
No 316
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.79 E-value=6.4 Score=36.89 Aligned_cols=181 Identities=15% Similarity=0.138 Sum_probs=103.2
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCcee--ec---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+... .| +..+.+.+|-. +. .. -|.+...- ..+-+..
T Consensus 29 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~ea 107 (314)
T 3qze_A 29 VALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTREA 107 (314)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 455667643332333333456666667787533 23 34556666532 22 22 35666654 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 108 i~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 145 (314)
T 3qze_A 108 VALTEAAKSGGADACLLV--TPYY-----------------NKPT-------------QEGMYQ----------HFRHIA 145 (314)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 789999999999999873 2321 0000 001111 124677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
+.+++||++=.+ .+++...++.+.. ..+-+= +. ...+..+.++.+..++++.|+ +|. ..-
T Consensus 146 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiK-------ds-sgd~~~~~~~~~~~~~~f~v~-~G~---d~~ 212 (314)
T 3qze_A 146 EAVAIPQILYNVPGRTSCDMLPETVERLSKVP-NIIGIK-------EA-TGDLQRAKEVIERVGKDFLVY-SGD---DAT 212 (314)
T ss_dssp HHSCSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEE-------EC-SCCHHHHHHHHHHSCTTSEEE-ESC---GGG
T ss_pred HhcCCCEEEEeCccccCCCCCHHHHHHHhcCC-CEEEEE-------cC-CCCHHHHHHHHHHcCCCeEEE-ecC---hHH
Confidence 778999999875 5678777776542 222121 11 123445556666665566664 453 234
Q ss_pred HHHHHHcCCCEEEechHH
Q 017718 292 VFKALALGASGIFIGRPV 309 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~ 309 (367)
++.++++||+++.-+..-
T Consensus 213 ~l~~l~~Ga~G~is~~an 230 (314)
T 3qze_A 213 AVELMLLGGKGNISVTAN 230 (314)
T ss_dssp HHHHHHTTCCEEEESGGG
T ss_pred HHHHHHCCCCEEEecHHh
Confidence 778899999999888743
No 317
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=92.75 E-value=6.3 Score=36.73 Aligned_cols=180 Identities=15% Similarity=0.174 Sum_probs=101.9
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-..+.|+...+ | +..+.+.||-. +. .. -|.+...- ..+-+..
T Consensus 21 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 99 (304)
T 3l21_A 21 TAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHS 99 (304)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 5556776433333333344666677778876433 3 33455666522 22 22 35666653 4566777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 100 i~la~~a~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 137 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVV--TPYY-----------------SKPP-------------QRGLQA----------HFTAVA 137 (304)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 889999999999999873 2321 0000 001111 234677
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. +-+|.-+ . ..+..+.++.. +.++.|+ +| +..
T Consensus 138 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds--s--------gd~~~~~~~~~--~~~f~v~-~G---~d~ 201 (304)
T 3l21_A 138 DATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDA--K--------ADLHSGAQIMA--DTGLAYY-SG---DDA 201 (304)
T ss_dssp TSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEEC--S--------CCHHHHHHHHH--HHCCEEE-ES---SGG
T ss_pred HhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECC--C--------CCHHHHHHHhc--CCCeEEE-eC---chH
Confidence 778999998864 5678777776543 1222211 1 12333334432 2266665 45 234
Q ss_pred HHHHHHHcCCCEEEechHHHH
Q 017718 291 DVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~l~ 311 (367)
-.+.++.+||+++.-+..-++
T Consensus 202 ~~l~~l~~Ga~G~is~~~n~~ 222 (304)
T 3l21_A 202 LNLPWLRMGATGFISVIAHLA 222 (304)
T ss_dssp GHHHHHHHTCCEEEESTHHHH
T ss_pred HHHHHHHcCCCEEEecHHhhh
Confidence 567889999999988875544
No 318
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=92.74 E-value=3.4 Score=39.58 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++-+.+++|-. + .+.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~~~ 177 (378)
T 2qdd_A 144 GTPDQMLGLIAEAAAQGYRTHSAKIGGSDP--A--------------------------------------------QDI 177 (378)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCSSCH--H--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHHhhhheeecCCCCCh--H--------------------------------------------HHH
Confidence 578888888888889999999887765310 0 000
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHHHHHHHH---cCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAEDARIAVQ---AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~a~~~~~---~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
..+.+|+.+ ++|+.++.- .+.+++....+ .|+ .|- +. -+ .++.+.++++.+ ++||++++
T Consensus 178 e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~i-~iE-------qP--~~-d~~~~~~l~~~~--~iPI~~dE 244 (378)
T 2qdd_A 178 ARIEAISAGLPDGHRVTFDVNRAWTPAIAVEVLNSVRARD-WIE-------QP--CQ-TLDQCAHVARRV--ANPIMLDE 244 (378)
T ss_dssp HHHHHHHHSCCTTCEEEEECTTCCCHHHHHHHHTSCCCCC-EEE-------CC--SS-SHHHHHHHHTTC--CSCEEECT
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHhCCCc-EEE-------cC--CC-CHHHHHHHHHhC--CCCEEECC
Confidence 122566665 477877754 35666544332 344 321 11 12 677788887655 79999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEechH
Q 017718 285 GVRRGTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 285 GI~~~~dv~kal~lG-Ad~V~ig~~ 308 (367)
.+.+..|+.+++..| +|.|++-..
T Consensus 245 ~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (378)
T 2qdd_A 245 CLHEFSDHLAAWSRGACEGVKIKPN 269 (378)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CcCCHHHHHHHHHhCCCCEEEeccc
Confidence 999999999999876 899999653
No 319
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=92.63 E-value=5.6 Score=38.28 Aligned_cols=117 Identities=13% Similarity=0.096 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+.+.+.+.++++.+.||+++=+.++.+-. + .+.
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~---~-------------------------------------------~~~e 178 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDF---D-------------------------------------------RDLR 178 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSH---H-------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCH---H-------------------------------------------HHHH
Confidence 67777788888889999999887653100 0 000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHH--cCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~--~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+ .+++.|- + ...+..++.+.++++.++ ++||++
T Consensus 179 ~v~avR~a~G~~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iE-------q-P~~~~~~~~~~~l~~~~~-~iPIa~ 249 (389)
T 2oz8_A 179 RLELLKTCVPAGSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVE-------D-PILRHDHDGLRTLRHAVT-WTQINS 249 (389)
T ss_dssp HHHHHHTTSCTTCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEE-------S-CBCTTCHHHHHHHHHHCC-SSEEEE
T ss_pred HHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEe-------C-CCCCcCHHHHHHHHhhCC-CCCEEe
Confidence 122666665 467777643 34444 455667 5555442 1 112235777888877652 699999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEec
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
++.+ +..|+.+++..| +|.|++.
T Consensus 250 dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 250 GEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp CTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred CCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 9999 999999999987 8999996
No 320
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=92.63 E-value=3.6 Score=39.84 Aligned_cols=125 Identities=14% Similarity=0.054 Sum_probs=85.2
Q ss_pred CCHHHHHHHH-HHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 133 KDRNVVAQLV-RRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 133 ~d~~~~~~~l-~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
.+++.+.+.+ +++.+.|++++=+.++++... .+ .. .+.+
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~-----------~~-----~~------------------------~~~d 177 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTR-----------CD-----VD------------------------IPGD 177 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC-----------CS-----CC------------------------HHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc-----------cc-----cC------------------------HHHH
Confidence 4567777777 777788999998877653210 00 00 0011
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+ ..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.. .+||++
T Consensus 178 ~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 247 (393)
T 4dwd_A 178 IAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDLGYSWFEE--------PVQHYHVGAMGEVAQRL--DITVSA 247 (393)
T ss_dssp HHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEEC--------CSCTTCHHHHHHHHHHC--SSEEEB
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEe
Confidence 1 123777776 578988754 34555 45677888887752 11223577788888776 799999
Q ss_pred ecCCCCHHHHHHHHHcCCCEEEech
Q 017718 283 DGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+..+.+..|+.+++..|+|.|++--
T Consensus 248 dE~~~~~~~~~~~i~~~~d~v~~k~ 272 (393)
T 4dwd_A 248 GEQTYTLQALKDLILSGVRMVQPDI 272 (393)
T ss_dssp CTTCCSHHHHHHHHHHTCCEECCCT
T ss_pred cCCcCCHHHHHHHHHcCCCEEEeCc
Confidence 9999999999999998899999853
No 321
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=92.62 E-value=1.7 Score=41.53 Aligned_cols=120 Identities=15% Similarity=0.198 Sum_probs=80.3
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.||+++-++++... + .+
T Consensus 139 ~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~--------------------------------------------~~ 171 (369)
T 2p8b_A 139 IADPENMAEEAASMIQKGYQSFKMKVGTNV---K--------------------------------------------ED 171 (369)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCH---H--------------------------------------------HH
T ss_pred CCChHHHHHHHHHHHHcCcCEEEEEeCCCH---H--------------------------------------------HH
Confidence 357777778888888999999987665210 0 00
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHHHH-H----HHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAEDAR-I----AVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~a~-~----~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
. -.+.+|+.+ ++|+.+..- .+.+++. . +.+.|++.|- + ...+..++.+.++++.+ ++||+
T Consensus 172 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI~ 241 (369)
T 2p8b_A 172 VKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLNIDWIE-------Q-PVIADDIDAMAHIRSKT--DLPLM 241 (369)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCEE-------C-CBCTTCHHHHHHHHHTC--CSCEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEEE-------C-CCCcccHHHHHHHHHhC--CCCEE
Confidence 0 122566665 577777753 2344444 3 3445666543 1 11234577788887766 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEechH
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig~~ 308 (367)
+++.+.+..++.+++..| +|.|++-..
T Consensus 242 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~ 269 (369)
T 2p8b_A 242 IDEGLKSSREMRQIIKLEAADKVNIKLM 269 (369)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred eCCCCCCHHHHHHHHHhCCCCEEEeecc
Confidence 999999999999999986 899999653
No 322
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=92.60 E-value=2.8 Score=39.02 Aligned_cols=108 Identities=19% Similarity=0.248 Sum_probs=76.0
Q ss_pred CCHHHHHHHH-HcCCcEEEEcC---CCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCCCCH-HHHHHHHHcCCCEEE
Q 017718 231 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGVRRG-TDVFKALALGASGIF 304 (367)
Q Consensus 231 ~~~~~a~~~~-~~G~d~i~vs~---~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI~~~-~dv~kal~lGAd~V~ 304 (367)
.++++|+... +.|+|.+-++- ||-+. +.| -.++.|.+|.+.+ .+|+..=||=..+ +++.|++.+|-.-|=
T Consensus 159 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~--~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiN 234 (288)
T 3q94_A 159 ADPAECKHLVEATGIDCLAPALGSVHGPYK--GEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAISLGTSKIN 234 (288)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCBSSCCS--SSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEEEcCcccCCcC--CCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHHcCCeEEE
Confidence 5688887765 69999999863 56442 222 3788999999988 6999997765444 568899999999999
Q ss_pred echHHHHHhhc-------c-----Ch-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017718 305 IGRPVVYSLAA-------E-----GE-KGVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 305 ig~~~l~~l~~-------~-----G~-~~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
|+|-+.++... + .+ .-+....+.+++.++..|..+|+.
T Consensus 235 i~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 285 (288)
T 3q94_A 235 VNTENQIEFTKAVREVLNKDQEVYDPRKFIGPGRDAIKATVIGKIREFGSN 285 (288)
T ss_dssp ECHHHHHHHHHHHHHHHHHCSSCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EChHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99977654321 0 11 123334456777778888888864
No 323
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=92.59 E-value=0.38 Score=44.73 Aligned_cols=78 Identities=24% Similarity=0.293 Sum_probs=57.0
Q ss_pred hcCCCEEEEecCCHHHHHHHHHcCCcEEEEcC--------CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 220 ITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 220 ~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
..+.|+++ .+...+.++.+.++|+++|.+.. .+|.. .....+.+.++++.+ ++|++...++.+.++
T Consensus 19 ~~~~~~i~-~~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~---~~~~~~~i~~i~~~~--~~Pvi~~~~~~~~~~ 92 (297)
T 2zbt_A 19 MFKGGVIM-DVTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVA---RMSDPKIIKEIMAAV--SIPVMAKVRIGHFVE 92 (297)
T ss_dssp GGTTEEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCC---CCCCHHHHHHHHTTC--SSCEEEEEETTCHHH
T ss_pred HhhCCeee-eechHHHHHHHHHCCCcEEEeccccchHHHhhcCCc---cCCCHHHHHHHHHhc--CCCeEEEeccCCHHH
Confidence 34668776 55668889999999999998721 11111 123456677776654 789999888888888
Q ss_pred HHHHHHcCCCEE
Q 017718 292 VFKALALGASGI 303 (367)
Q Consensus 292 v~kal~lGAd~V 303 (367)
+..++.+|||+|
T Consensus 93 ~~~~~~aGad~v 104 (297)
T 2zbt_A 93 AMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHCCCCEE
Confidence 989999999999
No 324
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.56 E-value=0.33 Score=46.60 Aligned_cols=67 Identities=21% Similarity=0.216 Sum_probs=48.9
Q ss_pred HHHHHHHHc--CCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 234 EDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 234 ~~a~~~~~~--G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
+.+..+.+. |++.+.++...| .....++.+.++++..+ ++||++ |++.+.+|+.++..+|||+|.++
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g----~~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG----YSEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT----TBHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhccCCCCEEEEEecCC----CcHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHHhCCCEEEEC
Confidence 345566666 999988853222 12235677888877653 588885 77899999999999999999775
No 325
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=92.53 E-value=1.7 Score=41.85 Aligned_cols=119 Identities=18% Similarity=0.106 Sum_probs=80.2
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++-+.+++.. +.|+.
T Consensus 143 ~~~~e~~~~~a~~~~~~G~~~iKiK~G~~~----~~d~~----------------------------------------- 177 (378)
T 3eez_A 143 AKSVEETRAVIDRYRQRGYVAHSVKIGGDV----ERDIA----------------------------------------- 177 (378)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCH----HHHHH-----------------------------------------
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEeccCCCH----HHHHH-----------------------------------------
Confidence 467888888888888899999988776411 00000
Q ss_pred ccHHHHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 212 LSWKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 212 ~~~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.++.- -+.++| +.+.+.|+ .|- +. .+.++.+.++++.+ .+||+++
T Consensus 178 -~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE-------qP---~~~~~~~~~l~~~~--~iPIa~d 243 (378)
T 3eez_A 178 -RIRDVEDIREPGEIVLYDVNRGWTRQQALRVMRATEDLHV-MFE-------QP---GETLDDIAAIRPLH--SAPVSVD 243 (378)
T ss_dssp -HHHHHTTSCCTTCEEEEECTTCCCHHHHHHHHHHTGGGTC-CEE-------CC---SSSHHHHHHTGGGC--CCCEEEC
T ss_pred -HHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHhccCCe-EEe-------cC---CCCHHHHHHHHhhC--CCCEEEC
Confidence 122666665 477887754 345554 34445555 442 11 12566677766655 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEechHH
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+.+.+..|+.+++..| +|.|++-...
T Consensus 244 E~~~~~~~~~~~l~~~~~d~v~ik~~~ 270 (378)
T 3eez_A 244 ECLVTLQDAARVARDGLAEVFGIKLNR 270 (378)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEEEHHH
T ss_pred CCCCCHHHHHHHHHcCCCCEEEeCchh
Confidence 9999999999999986 8999997644
No 326
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=92.51 E-value=1.2 Score=43.04 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=80.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.++... + .+.
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~--------------------------------------------~~~ 176 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGPL---K--------------------------------------------ADI 176 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSCH---H--------------------------------------------HHH
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCCH---H--------------------------------------------HHH
Confidence 57787778888888899999877654210 0 000
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+++
T Consensus 177 e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~d 246 (397)
T 2qde_A 177 AMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYNLSKIEQ--------PLPAWDLDGMARLRGKV--ATPIYAD 246 (397)
T ss_dssp HHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGCCSCEEC--------CSCTTCHHHHHHHHTTC--SSCEEES
T ss_pred HHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEEEe
Confidence 123666665 578877743 34555 45566778776631 11223577777777655 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..++.+++..| +|.|++--
T Consensus 247 E~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 247 ESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEEec
Confidence 9999999999999976 89999853
No 327
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=92.30 E-value=0.4 Score=42.05 Aligned_cols=65 Identities=15% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCc-EEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP-VFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~-via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+.++.+.+.|++.|.+... .+...+.+.++.+.. .++ ++..|++.+.+++..++.+|||+|.++.
T Consensus 23 ~~~~~~~~~G~~~i~l~~~-------~~~~~~~i~~i~~~~--~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~~~ 88 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPLN-------SPQWEQSIPAIVDAY--GDKALIGAGTVLKPEQVDALARMGCQLIVTPN 88 (212)
T ss_dssp HHHHHHHHHTCCEEEEETT-------STTHHHHHHHHHHHH--TTTSEEEEECCCSHHHHHHHHHTTCCEEECSS
T ss_pred HHHHHHHHCCCCEEEEeCC-------ChhHHHHHHHHHHhC--CCCeEEEeccccCHHHHHHHHHcCCCEEEeCC
Confidence 4578888999999988432 134456677776655 344 4567899999999999999999998875
No 328
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=92.25 E-value=3.3 Score=39.86 Aligned_cols=82 Identities=15% Similarity=0.140 Sum_probs=61.2
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||++++.+.
T Consensus 186 avR~a~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 255 (383)
T 3i4k_A 186 ELAREVGDRVSLRIDINARWDRRTALHYLPILAEAGVELFEQ--------PTPADDLETLREITRRT--NVSVMADESVW 255 (383)
T ss_dssp HHHHTTTTTSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEES--------CSCTTCHHHHHHHHHHH--CCEEEESTTCS
T ss_pred HHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhhHHHHHHHHhhC--CCCEEecCccC
Confidence 677776 468888754 34444 55677889887741 11223567788888777 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 256 ~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 256 TPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp SHHHHHHHHHHTCCSEEEECT
T ss_pred CHHHHHHHHHcCCCCEEEEcc
Confidence 999999999987 89999864
No 329
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=92.09 E-value=1.4 Score=49.73 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=84.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHh-----cCCCcEEE-ecCCCCHHHHHHHHHcCCCEEEech
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAT-----QGRIPVFL-DGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~-----~~~~~via-~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
++|..+.+.|+..|++|..+-..-....|.+-++..+..++ +.++-+++ +|-+|+.-|++-.+-.||++|.=.-
T Consensus 591 ~~a~~av~~g~~iliLsDr~~~~~~~~ip~lla~~avh~~L~~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av~Pyl 670 (1479)
T 1ea0_A 591 QETEDAVRGGATHVILTDEAMGPARAAIPAILATGAVHTHLIRSNLRTFTSLNVRTAEGLDTHYFAVLIGVGATTVNAYL 670 (1479)
T ss_dssp HHHHHHHHHTCCEEEEECTTCBTTEEECCHHHHHHHHHHHHHTTTCGGGCEEEEECSSCCSHHHHHHHHTTTCSEEECHH
T ss_pred HHHHHHHHCCCcEEEECCCCCCCCccCcCHHHHHHHHHHHHHhcCccccceEEEEeCCchhHHHHHHHHhcCccccCHHH
Confidence 45778889999999999754211111234444444444443 33577777 7789999999988889999996333
Q ss_pred HH--HHHhhccC-------hHHHHHHHHHHHHHHHHHHHHhCCCChhhhccccee
Q 017718 308 PV--VYSLAAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 353 (367)
Q Consensus 308 ~~--l~~l~~~G-------~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~ 353 (367)
++ +..+...| ++.+.++++.+.+.|...|..+|.++++.-++.-+.
T Consensus 671 a~e~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 725 (1479)
T 1ea0_A 671 AQEAIAERHRRGLFGSMPLEKGMANYKKAIDDGLLKIMSKMGISVISSYRGGGNF 725 (1479)
T ss_dssp HHHHHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHTTSCCE
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 22 22222223 357889999999999999999999999998877654
No 330
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=91.91 E-value=3.9 Score=39.15 Aligned_cols=228 Identities=15% Similarity=0.169 Sum_probs=109.6
Q ss_pred ccceEeCcccchhccCChhhHHHHHHHHHcCCc-----ee-ecCCCCCCHHHHHhh----CCCceEEEEee--cCCHHHH
Q 017718 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-----MT-LSSWSTSSVEEVAST----GPGIRFFQLYV--YKDRNVV 138 (367)
Q Consensus 71 ~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~-----~~-vs~~~~~~~e~i~~~----~~~~~~~QLy~--~~d~~~~ 138 (367)
..|++||=+|..--..-+.-..+.++|+++|.. .+ +=++ ..+.+... ..+..++++|- .-..+..
T Consensus 4 ~~~~IIAEig~NHnGdle~Ak~lI~~A~~aGad~~~d~avKfQt~---~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~ 80 (350)
T 3g8r_A 4 SKPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYR---NLDTFIHSSFKGRDDVKYVKRFEETRLQPEQM 80 (350)
T ss_dssp -CCEEEEECTTTTTTCSHHHHHHHHHHHHHTTTCCSEEEEEEEEC---CHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHH
T ss_pred CCCEEEEEECCCccCcHHHHHHHHHHHHHhCCcccCCeeEEcccc---chhhhcChhccCccHHHHHHHHHHhcCCHHHH
Confidence 469999998764322112223677889999875 22 2222 22333211 01112333331 1356777
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-cHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL-SWKWL 217 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~l 217 (367)
..+.+.+++.|...+.-=.| .+.-|.-..+..|- +. -...++ ++..|
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD-----~~svd~l~~~~v~~-~K--------------------------I~S~~~~N~pLL 128 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFD-----EESVDLIEAHGIEI-IK--------------------------IASCSFTDWPLL 128 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECS-----HHHHHHHHHTTCCE-EE--------------------------ECSSSTTCHHHH
T ss_pred HHHHHHHHHcCCcEEeccCC-----HHHHHHHHHcCCCE-EE--------------------------ECcccccCHHHH
Confidence 88888999999876642222 12222222221110 00 001222 33433
Q ss_pred Hh--hcCCCEEEEecC-CHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe----cCC
Q 017718 218 QT--ITKLPILVKGVL-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD----GGV 286 (367)
Q Consensus 218 ~~--~~~~Pv~vK~v~-~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~----GGI 286 (367)
++ .+++||++|..+ +.++. +.+.+.|-+.+.+...-++.-......+..++.+++..+ .+||-.+ |+.
T Consensus 129 ~~va~~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~SdHt~g~~ 207 (350)
T 3g8r_A 129 ERIARSDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYSTHEDPDL 207 (350)
T ss_dssp HHHHTSCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEEECCCSSC
T ss_pred HHHHhhCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcCCCCCCCc
Confidence 32 368999999874 45553 334456777444422211110011123445666666542 4788665 332
Q ss_pred CCHHHHHHHHHcCCCEEEechHHHHHh--hcc-----ChHHHHHHHHHHHHHHHHHHHHhCCC
Q 017718 287 RRGTDVFKALALGASGIFIGRPVVYSL--AAE-----GEKGVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l~~l--~~~-----G~~~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
. .-+..|.++||+. |=+-|-..- ... -++ -+..|.++++..-..+|..
T Consensus 208 -~-~~~~AAvAlGA~v--IEkH~tldr~~g~D~~~Sl~P~----ef~~lv~~ir~i~~alG~~ 262 (350)
T 3g8r_A 208 -M-EPIMLAVAQGATV--FEKHVGLPTDQYGINNYSANPE----QVRRWLAAAARALAMLGDG 262 (350)
T ss_dssp -C-HHHHHHHHTTCCE--EEEEBCCCBTTBCCCTTCBCHH----HHHHHHHHHHHHHHHHCCT
T ss_pred -c-HHHHHHHHcCCCE--EEEecCcccCCCCcccccCCHH----HHHHHHHHHHHHHHHcCCC
Confidence 2 2345788999973 333221100 011 133 3455566666666667753
No 331
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=91.89 E-value=1.3 Score=43.44 Aligned_cols=127 Identities=7% Similarity=-0.003 Sum_probs=86.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.+++... + + ...+ +.++
T Consensus 178 ~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~-----d----------------------------g---~~~~----~~di 217 (412)
T 3stp_A 178 GSIEAMQKEAEEAMKGGYKAFKSRFGYGPK-----D----------------------------G---MPGM----RENL 217 (412)
T ss_dssp CCHHHHHHHHHHHHTTTCSEEEEECCCCGG-----G----------------------------H---HHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccCcc-----c----------------------------c---cchH----HHHH
Confidence 578888888888889999999887764210 0 0 0000 0111
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.. .+||+++
T Consensus 218 e~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~d 287 (412)
T 3stp_A 218 KRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLEE--------PVIADDVAGYAELNAMN--IVPISGG 287 (412)
T ss_dssp HHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHTC--SSCEEEC
T ss_pred HHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhCC--CCCEEeC
Confidence 123777776 578888754 35555 45567778887742 11233577788887765 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEechHH
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+.+.+..|+.+++..| +|.|++--..
T Consensus 288 E~~~~~~~~~~li~~~a~D~v~ik~~~ 314 (412)
T 3stp_A 288 EHEFSVIGCAELINRKAVSVLQYDTNR 314 (412)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCHHH
T ss_pred CCCCCHHHHHHHHHcCCCCEEecChhh
Confidence 9999999999999987 8999987544
No 332
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=91.85 E-value=2.6 Score=41.42 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.+++|.... .|. .|. .+ ..+.+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~------~G~-~~~-----------------------~~----~~~~d~ 190 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR------GGH-MPA-----------------------MT----DISLSV 190 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT------CCB-CCC-----------------------HH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc------cCC-Ccc-----------------------hh----hHHHHH
Confidence 57788888888888899999998887664200 000 000 00 000111
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ .+||+++
T Consensus 191 e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~d 260 (433)
T 3rcy_A 191 EFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEE--------PVPPDNVGAMAQVARAV--RIPVATG 260 (433)
T ss_dssp HHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHS--SSCEEEC
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhcc--CCCEEec
Confidence 123777776 478888653 35555 45566778877742 11223577888888876 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..|+.+++..| +|.|++--
T Consensus 261 E~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 261 ERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred CCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999987 89998864
No 333
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=91.78 E-value=1.6 Score=38.53 Aligned_cols=78 Identities=14% Similarity=0.137 Sum_probs=48.8
Q ss_pred CCCEEEEecC-CHHHHHHHHHcCCcEEEEcCC-CCC--CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 222 KLPILVKGVL-TAEDARIAVQAGAAGIIVSNH-GAR--QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 222 ~~Pv~vK~v~-~~~~a~~~~~~G~d~i~vs~~-gg~--~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
++|++-.... +.++. .+.+..+|++.+... ||+ .+||. .++++.. .+.|+|..||+ +++.+.+++.
T Consensus 96 ~~~vika~~v~~~~~l-~~~~~~~d~~LlD~~~gGtG~~fdW~-----~l~~~~~---~~~p~~LAGGL-~peNV~~ai~ 165 (203)
T 1v5x_A 96 FYPVIKAFPLEGPARP-EWADYPAQALLLDGKRPGSGEAYPRA-----WAKPLLA---TGRRVILAGGI-APENLEEVLA 165 (203)
T ss_dssp TSCEEEEEECSSSCCG-GGGGSSCSEEEEECSSTTSCCCCCGG-----GGHHHHH---TTSCEEECSSC-CSTTHHHHHH
T ss_pred CCCEEEEEEcCChHhh-hhhhcCCCEEEEcCCCCCCCCccCHH-----HHHhhhc---cCCcEEEECCC-CHHHHHHHHh
Confidence 4676533322 22222 333444899998763 443 34443 3443211 25799999999 6788988887
Q ss_pred cCCCEEEechHH
Q 017718 298 LGASGIFIGRPV 309 (367)
Q Consensus 298 lGAd~V~ig~~~ 309 (367)
+++.+|=+.+.+
T Consensus 166 ~~p~gVDvsSGv 177 (203)
T 1v5x_A 166 LRPYALDLASGV 177 (203)
T ss_dssp HCCSEEEESGGG
T ss_pred cCCCEEEeCCce
Confidence 799999999844
No 334
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=91.69 E-value=2.7 Score=40.04 Aligned_cols=121 Identities=20% Similarity=0.203 Sum_probs=80.4
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++=+.+++.. +.|+.
T Consensus 137 ~~~~~~~~~~a~~~~~~G~~~~K~K~g~~~----~~d~~----------------------------------------- 171 (354)
T 3jva_A 137 IDEPNVMAQKAVEKVKLGFDTLKIKVGTGI----EADIA----------------------------------------- 171 (354)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCH----HHHHH-----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEeCCCH----HHHHH-----------------------------------------
Confidence 357777777777778899999877665321 00000
Q ss_pred ccHHHHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 212 LSWKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 212 ~~~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ ++++.+..- .+.++| +.+.+.|++.|- + ...+..++.+.++++.. .+||+++
T Consensus 172 -~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~d 240 (354)
T 3jva_A 172 -RVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQIELVE-------Q-PVKRRDLEGLKYVTSQV--NTTIMAD 240 (354)
T ss_dssp -HHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSEEEES
T ss_pred -HHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHHhC--CCCEEEc
Confidence 122666665 467877653 455554 344455555553 1 11223567788887766 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEechH
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~~ 308 (367)
+.+.+..|+.+++..| +|.|++--.
T Consensus 241 E~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 241 ESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEECch
Confidence 9999999999999976 799998753
No 335
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=91.66 E-value=3.7 Score=38.13 Aligned_cols=109 Identities=17% Similarity=0.294 Sum_probs=76.5
Q ss_pred CCHHHHHHHH-HcCCcEEEEcC---CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCCEEEe
Q 017718 231 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGASGIFI 305 (367)
Q Consensus 231 ~~~~~a~~~~-~~G~d~i~vs~---~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~-~~dv~kal~lGAd~V~i 305 (367)
.++++|+... +.|+|.+-++- ||-+. ..-.-.++.|.+|.+.+ .+|+..=||=.. -+++.|++.+|..-|=|
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~-~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~~Gv~KiNi 231 (286)
T 1gvf_A 155 TDPQEAKRFVELTGVDSLAVAIGTAHGLYS-KTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIELGVTKVNV 231 (286)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSCCS-SCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHHCCCEEEeecCccccCcC-CCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHHCCCeEEEE
Confidence 6788887765 79999999864 55443 11123678999999887 799999775543 45688999999999999
Q ss_pred chHHHHHhhc-------cC-----hH-HHHHHHHHHHHHHHHHHHHhCCC
Q 017718 306 GRPVVYSLAA-------EG-----EK-GVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 306 g~~~l~~l~~-------~G-----~~-~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
+|-+-++... .. +. -+....+.+++.++..|..+|+.
T Consensus 232 ~Tdl~~a~~~~~r~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 281 (286)
T 1gvf_A 232 ATELKIAFAGAVKAWFAENPQGNDPRYYMRVGMDAMKEVVRNKINVCGSA 281 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred ChHHHHHHHHHHHHHHHhCcccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9977554321 11 11 13334467788888888888864
No 336
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=91.64 E-value=8.6 Score=35.82 Aligned_cols=183 Identities=13% Similarity=0.132 Sum_probs=100.3
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hhCC--CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------STGP--GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~~~--~~~~~QLy~~~d~~~~ 138 (367)
|-++.|+.-.+-.+.+.-..+.+-..+.|+...+ + +..+.+.+|-. +... -+.+...- ..+-+..
T Consensus 20 ~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 98 (307)
T 3s5o_A 20 PPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQAT 98 (307)
T ss_dssp CBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHH
T ss_pred EeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHH
Confidence 4456676433222322233455556667875432 3 33556666522 2222 34555543 3466667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ++ | +.+ ..++.+ .++.+.
T Consensus 99 i~la~~A~~~Gadavlv~--~P~y-~~----------~-~~s----------------~~~l~~----------~f~~ia 138 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVV--TPCY-YR----------G-RMS----------------SAALIH----------HYTKVA 138 (307)
T ss_dssp HHHHHHHHHTTCSEEEEE--CCCT-TG----------G-GCC----------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEc--CCCc-CC----------C-CCC----------------HHHHHH----------HHHHHH
Confidence 788999999999999873 2331 00 0 000 001111 224676
Q ss_pred hhcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhc-CCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~~~via~GGI~~~~ 290 (367)
+.+++||++=.+ .+++...++.+.. ..+-+= +. ...+..+.++.+... .++.|+ +|. ..
T Consensus 139 ~a~~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiK-------ds-sgd~~~~~~~~~~~~~~~f~v~-~G~---d~ 205 (307)
T 3s5o_A 139 DLSPIPVVLYSVPANTGLDLPVDAVVTLSQHP-NIVGMX-------DS-GGDVTRIGLIVHKTRKQDFQVL-AGS---AG 205 (307)
T ss_dssp HHCSSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEE-------EC-SCCHHHHHHHHHHTTTSSCEEE-ESS---GG
T ss_pred hhcCCCEEEEeCCcccCCCCCHHHHHHHhcCC-CEEEEE-------cC-CCCHHHHHHHHHhccCCCeEEE-eCc---HH
Confidence 778999998875 5678777776542 222221 11 113445555555442 356654 452 34
Q ss_pred HHHHHHHcCCCEEEechHH
Q 017718 291 DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 291 dv~kal~lGAd~V~ig~~~ 309 (367)
.++.++++|++++.-+..-
T Consensus 206 ~~l~~l~~G~~G~is~~an 224 (307)
T 3s5o_A 206 FLMASYALGAVGGVCALAN 224 (307)
T ss_dssp GHHHHHHHTCCEEECGGGG
T ss_pred HHHHHHHcCCCEEEechhh
Confidence 5778999999999988743
No 337
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=91.58 E-value=1.8 Score=42.08 Aligned_cols=131 Identities=20% Similarity=0.167 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.++++..+.. +. .+. .+. .+.+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~------g~-~~~-----------------------~~~----~~~d~ 195 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYD------GH-QPS-----------------------LED----LERSE 195 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------SB-CCC-----------------------HHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccc------cc-ccc-----------------------HHH----HHHHH
Confidence 367777777778888999999887765432100 00 000 000 01111
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +.+|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ .+||+++
T Consensus 196 ~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~d 265 (404)
T 4e5t_A 196 AFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLARRLEAYDPLWFEE--------PIPPEKPEDMAEVARYT--SIPVATG 265 (404)
T ss_dssp HHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEEC
T ss_pred HHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEEC--------CCCcccHHHHHHHHhhC--CCCEEeC
Confidence 123777776 578888754 35555 45566778887752 11223577788888876 8999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..|+.+++..| +|.|++--
T Consensus 266 E~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 266 ERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp TTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred CCcCCHHHHHHHHHhCCCCEEecCc
Confidence 9999999999999987 79888754
No 338
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=91.56 E-value=1.4 Score=42.64 Aligned_cols=117 Identities=9% Similarity=0.015 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.+.||+++=+.++.+.. + .+.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~--~--------------------------------------------~~~e 198 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPI--E--------------------------------------------EDRM 198 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCH--H--------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCH--H--------------------------------------------HHHH
Confidence 67777777888888999999887653110 0 000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.+ ++||++++
T Consensus 199 ~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE 268 (392)
T 1tzz_A 199 RIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYPLFWYEE--------VGDPLDYALQAALAEFY--PGPMATGE 268 (392)
T ss_dssp HHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHTTTC--CSCEEECT
T ss_pred HHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcCCCeecC--------CCChhhHHHHHHHHhhC--CCCEEECC
Confidence 122566655 477777643 34555 44556677776531 01134567777776655 79999999
Q ss_pred CCCCHHHHHHHHHcC-----CCEEEec
Q 017718 285 GVRRGTDVFKALALG-----ASGIFIG 306 (367)
Q Consensus 285 GI~~~~dv~kal~lG-----Ad~V~ig 306 (367)
.+.+..|+.+++..| +|.|++-
T Consensus 269 ~~~~~~~~~~~i~~~~~~~~~d~v~ik 295 (392)
T 1tzz_A 269 NLFSHQDARNLLRYGGMRPDRDWLQFD 295 (392)
T ss_dssp TCCSHHHHHHHHHHSCCCTTTCEECCC
T ss_pred CCCCHHHHHHHHHcCCCccCCcEEEEC
Confidence 999999999999988 8999885
No 339
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=91.43 E-value=1.2 Score=42.98 Aligned_cols=118 Identities=11% Similarity=0.071 Sum_probs=78.5
Q ss_pred CCH---HHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccC
Q 017718 133 KDR---NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQID 209 (367)
Q Consensus 133 ~d~---~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 209 (367)
.++ +.+.+.++++.+.||+++=+.++.+-. +
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~--~-------------------------------------------- 168 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSF--K-------------------------------------------- 168 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCH--H--------------------------------------------
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCH--H--------------------------------------------
Confidence 456 777777888888999998876653100 0
Q ss_pred ccc-cHHHHHhhc--CCCEEEEec--CCHHHH----HHHHHc-CCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCc
Q 017718 210 RSL-SWKWLQTIT--KLPILVKGV--LTAEDA----RIAVQA-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIP 279 (367)
Q Consensus 210 ~~~-~~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~-G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~ 279 (367)
.+. ..+.+|+.+ ++++.+..- .+.+++ +.+.+. |++.|-- ...+..++.+.++++.+ ++|
T Consensus 169 ~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iP 238 (382)
T 2gdq_A 169 EDVRHINALQHTAGSSITMILDANQSYDAAAAFKWERYFSEWTNIGWLEE--------PLPFDQPQDYAMLRSRL--SVP 238 (382)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHTTHHHHTTCSCEEEEEC--------CSCSSCHHHHHHHHTTC--SSC
T ss_pred HHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHhhccCCeEEEC--------CCCcccHHHHHHHHhhC--CCC
Confidence 000 122666665 477887653 355554 455566 6665531 11233577777777655 799
Q ss_pred EEEecCCCCHHHHHHHHHcC-CCEEEec
Q 017718 280 VFLDGGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 280 via~GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
|++++.+.+..++.+++..| +|.|++-
T Consensus 239 Ia~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 239 VAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred EEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999999987 8999883
No 340
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.40 E-value=0.82 Score=42.16 Aligned_cols=36 Identities=33% Similarity=0.396 Sum_probs=31.1
Q ss_pred HHHHhhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v~-~~~~a~~~~~~G~d~i~vs 250 (367)
+.+|+.+++||++-... ++++++.+.++|+|+++|.
T Consensus 199 ~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 199 TQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp HHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 47888889999998764 6999998999999999993
No 341
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=91.36 E-value=5.3 Score=37.46 Aligned_cols=110 Identities=26% Similarity=0.331 Sum_probs=76.9
Q ss_pred CCHHHHHHHH-HcCCcEEEEcC---CCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCC-------------------
Q 017718 231 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV------------------- 286 (367)
Q Consensus 231 ~~~~~a~~~~-~~G~d~i~vs~---~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI------------------- 286 (367)
.++++|+... +.|+|.+-++- ||-+..++.| -.++.|.+|.+.+ .+|+..=||=
T Consensus 153 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~~gg~~~~ 230 (305)
T 1rvg_A 153 TNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRASGGEIGE 230 (305)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHHTTCCCCS
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHhhcccccc
Confidence 5788887765 59999999863 6654432222 3678999999888 6999997764
Q ss_pred --C-CHHHHHHHHHcCCCEEEechHHHHHhhc-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017718 287 --R-RGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 287 --~-~~~dv~kal~lGAd~V~ig~~~l~~l~~-------~G-----~-~~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
. .-+++.|++.+|..-|=|+|-+-++... +. + .-+....+.+++.++..|..+|+.
T Consensus 231 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 302 (305)
T 1rvg_A 231 AAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSV 302 (305)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 4567889999999999999977554321 11 1 123334466777788888888864
No 342
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=91.19 E-value=0.79 Score=42.05 Aligned_cols=104 Identities=25% Similarity=0.329 Sum_probs=74.9
Q ss_pred CceEEEEeec-------CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccc
Q 017718 123 GIRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (367)
Q Consensus 123 ~~~~~QLy~~-------~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (367)
+..|+||++- .|+..+.+..++.++.|++.+.++.|.|+.++|..++...+-+|.+- +
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~------------p--- 166 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAG------------L--- 166 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSS------------S---
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCc------------c---
Confidence 5679999875 66777777777778889999988999999988887775433222110 0
Q ss_pred cchhhHHHhhhccCccccH---HHHHhhcCCCEEEEe-cCCHHHHHHHHHcCCcEEEEc
Q 017718 196 NDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKG-VLTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~-v~~~~~a~~~~~~G~d~i~vs 250 (367)
.+++ ..-.+| +.+++..++||++.+ +.+++++..+.+.|+|++.|.
T Consensus 167 IGsG---------~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 167 IGSG---------LGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp TTCC---------CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred CCCC---------CCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 0000 011134 377777799999984 589999999999999999983
No 343
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=91.06 E-value=1 Score=43.41 Aligned_cols=120 Identities=8% Similarity=0.031 Sum_probs=81.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.+.|++++=+.++++-. .- +.+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~-~~-------------------------------------------~~d~~ 181 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGD-DP-------------------------------------------DTDYA 181 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTS-CH-------------------------------------------HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCC-CH-------------------------------------------HHHHH
Confidence 33777777888888999999887764310 00 0011
Q ss_pred cHHHHHhhc--CCCEEEEec--CC-HHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 SWKWLQTIT--KLPILVKGV--LT-AEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~-~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.+..- .+ .++| +.+.+.|++.|-- ...+..++.+.++++.. .+||+++
T Consensus 182 ~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~d 251 (374)
T 3sjn_A 182 IVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEE--------PVLADSLISYEKLSRQV--SQKIAGG 251 (374)
T ss_dssp HHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEEC--------SSCTTCHHHHHHHHHHC--SSEEEEC
T ss_pred HHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEEC--------CCCcccHHHHHHHHhhC--CCCEEeC
Confidence 123677765 578888754 45 6664 4455667776641 11123577788888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEech
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+.+.+..|+.+++..| +|.|++--
T Consensus 252 E~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 252 ESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp TTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred CCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 9999999999999875 89998753
No 344
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.04 E-value=0.86 Score=42.51 Aligned_cols=154 Identities=15% Similarity=0.035 Sum_probs=82.0
Q ss_pred ccceEeCcccchhccCChhhHHHHHHHHHcCCc-eeecCCCC----------CCHH---HHH----hhCCCceEEEEeec
Q 017718 71 SMPIMIAPTAMQKMAHPEGEYATARAASAAGTI-MTLSSWST----------SSVE---EVA----STGPGIRFFQLYVY 132 (367)
Q Consensus 71 ~~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~-~~vs~~~~----------~~~e---~i~----~~~~~~~~~QLy~~ 132 (367)
..|++++-++. .++.-...++.+.+.|.. ++.=.+++ .+.| ++. +...-|.++.+...
T Consensus 93 ~~p~~~~i~g~----~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGM----SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCS----SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred CCCEEEEcCCC----CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 45776664421 122234677777888866 43211210 1222 222 22235788888766
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
-+.+...++++.++++|+++|.++-- ...|.. -|....- | .... .......++. .....
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~-~~~g~~-i~~~~~~--~---~~~~-------~~~~gG~sg~-------~~~~~ 227 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNS-IGNGLF-IDPEAES--V---VIKP-------KDGFGGIGGA-------YIKPT 227 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCC-EEEEEC-EETTTTE--E---SCSG-------GGGEEEEESG-------GGHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCC-CCcCce-eccCCCC--c---cccc-------CCCCCccccc-------cccHH
Confidence 67777788899999999999987422 100000 0000000 0 0000 0000000000 00112
Q ss_pred cHH---HHHhhc--CCCEEEEec-CCHHHHHHHHHcCCcEEEE
Q 017718 213 SWK---WLQTIT--KLPILVKGV-LTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 213 ~~~---~l~~~~--~~Pv~vK~v-~~~~~a~~~~~~G~d~i~v 249 (367)
.|+ .+++.+ ++||+.-+- .+.+++..+..+|||+|.+
T Consensus 228 ~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 228 ALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp HHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 343 677777 799887664 6899999999999999988
No 345
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=90.89 E-value=0.94 Score=42.40 Aligned_cols=71 Identities=20% Similarity=0.133 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+.|+...++|||.|.+- + +.++.+.+.++.+.++.++|++++-+-....++.+.-.+|...|.++...+.+
T Consensus 174 ~Ra~ay~eAGAd~i~~e--~------~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~~v~~~~~~~ra 244 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMH--S------KKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVSMVIWANHNLRA 244 (295)
T ss_dssp HHHHHHHHTTCSEEEEC--C------CSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCCEEEECSHHHHH
T ss_pred HHHHHHHHcCCCEEEEc--C------CCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 45788999999999982 2 13456677788888855599998733111123455556999999999877664
No 346
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.75 E-value=1.6 Score=40.33 Aligned_cols=84 Identities=19% Similarity=0.130 Sum_probs=57.0
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC----CCCCccchHH-HH---HHHHHHhcCCCcEEEec---CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIM-AL---EEVVKATQGRIPVFLDG---GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~----~~~~~~~~~~-~l---~~i~~~~~~~~~via~G---GI~~~~ 290 (367)
+-|+++=.+-+.-.|+.+.++|+|.|.+....+. ..|..+-+++ .+ +.+++.+ .+.||++|- |..+++
T Consensus 28 g~~i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~vvaD~pfgsY~s~~ 106 (275)
T 3vav_A 28 GEKIAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRALIVADLPFGTYGTPA 106 (275)
T ss_dssp TCCEEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSEEEEECCTTSCSSHH
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCCEEEecCCCCCCCHH
Confidence 5789888888999999999999999965432221 1234444443 33 3333322 258899974 456888
Q ss_pred HHH----HHHHcCCCEEEec
Q 017718 291 DVF----KALALGASGIFIG 306 (367)
Q Consensus 291 dv~----kal~lGAd~V~ig 306 (367)
+++ +.+..||++|-|=
T Consensus 107 ~a~~~a~rl~kaGa~aVklE 126 (275)
T 3vav_A 107 DAFASAVKLMRAGAQMVKFE 126 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEC
Confidence 875 5666899999874
No 347
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=90.75 E-value=1.2 Score=40.93 Aligned_cols=36 Identities=33% Similarity=0.360 Sum_probs=31.1
Q ss_pred HHHHhhcCCCEEEEecCC-HHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQTITKLPILVKGVLT-AEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v~~-~~~a~~~~~~G~d~i~vs 250 (367)
+.+|+..++||.+-+..+ ++++..+..+|||+++|.
T Consensus 198 ~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 198 EKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp HHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 478887899999987655 999999999999999994
No 348
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=90.75 E-value=11 Score=35.24 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=99.1
Q ss_pred cceEeCcccchhccCChhhHHHHHHHHHcCCcee--ec---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 72 MPIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LS---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 72 ~Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
.|.++.|+.-.+-.+.+.-..+.+-.-+.|+... .| +..+.+.||-. +. .. -|.+...- ..+-..
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 3556677743332333333456666667787533 23 34556666522 22 22 45666654 356666
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCC--chhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLG--RREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWK 215 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g--~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 215 (367)
..++.+.|+++|++++.+. .|... ++ | + ..++.+ .++
T Consensus 92 ai~la~~A~~~Gadavlv~--~Pyy~~~~~----------~---s----------------~~~l~~----------~f~ 130 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAM--PPYHGATFR----------V---P----------------EAQIFE----------FYA 130 (309)
T ss_dssp HHHHHHHHHHTTCSEEEEC--CSCBTTTBC----------C---C----------------HHHHHH----------HHH
T ss_pred HHHHHHHHHHcCCCEEEEc--CCCCccCCC----------C---C----------------HHHHHH----------HHH
Confidence 7789999999999999873 24320 00 0 0 001111 234
Q ss_pred HHHhhcCCCEEEEec------CCHHHHHHHHH-c-CCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTITKLPILVKGV------LTAEDARIAVQ-A-GAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v------~~~~~a~~~~~-~-G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+.+.+++||++=.+ .+++...++.+ . .+-+|-.. .....+.+.++.+..++.+..+.+|
T Consensus 131 ~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~pnIvgiK~~---------~~~~~~~~~~~~~~~~~~~~~~~~G--- 198 (309)
T 3fkr_A 131 RVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQVAYFXIE---------TPGAANKLRELIRLGGDAIEGPWDG--- 198 (309)
T ss_dssp HHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHSTTEEEEEEC---------SSSHHHHHHHHHHHHGGGCCEEEEC---
T ss_pred HHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCCCEEEEECC---------CcchHHHHHHHHHhcCCceeeecCC---
Confidence 676778999998765 56787777764 3 23333211 1123445555555543333223333
Q ss_pred CHHH---HHHHHHcCCCEEEech
Q 017718 288 RGTD---VFKALALGASGIFIGR 307 (367)
Q Consensus 288 ~~~d---v~kal~lGAd~V~ig~ 307 (367)
.| .+.++++||+++..+.
T Consensus 199 --~d~~~l~~~l~~G~~G~i~~n 219 (309)
T 3fkr_A 199 --EEAITLLADLHAGATGAMTGG 219 (309)
T ss_dssp --GGGTTHHHHHHTTCCEECCCS
T ss_pred --chHHHHHHHHHCCCcEEEEhh
Confidence 33 4578999999987664
No 349
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=90.72 E-value=10 Score=34.92 Aligned_cols=174 Identities=16% Similarity=0.191 Sum_probs=97.7
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hhCCCceEEEEeecCCHHHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~~~~~~~~QLy~~~d~~~~~~ 140 (367)
|.++.|+. .+-.+.+.-..+.+-.-+.|+...+ || ..+.+.+|-. +...+ .+...- ..+-+...+
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~ 81 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIA 81 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHH
Confidence 45567775 5444444444666666778876443 33 3456666532 22334 444543 345666778
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcccc-ccccccccCccccccchhhHHHhhhccCccccHHHHHh
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL-KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT 219 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 219 (367)
+.+.|+++|++++.+. .|.. .. .+ ..++.+ .++.+.+
T Consensus 82 la~~A~~~Gadavlv~--~P~y-----------------~~~~s-------------~~~l~~----------~f~~va~ 119 (286)
T 2r91_A 82 LAKYAESRGAEAVASL--PPYY-----------------FPRLS-------------ERQIAK----------YFRDLCS 119 (286)
T ss_dssp HHHHHHHTTCSEEEEC--CSCS-----------------STTCC-------------HHHHHH----------HHHHHHH
T ss_pred HHHHHHhcCCCEEEEc--CCcC-----------------CCCCC-------------HHHHHH----------HHHHHHH
Confidence 8999999999999873 3331 10 00 001111 2346667
Q ss_pred hcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 220 ITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 220 ~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+++||++=.+ .+++...+ --.+-+|.-+. ..+..+.++.+ .++++.|+ +| +..-+
T Consensus 120 a~~lPiilYn~P~~tg~~l~~~~~~~--~pnivgiKds~----------gd~~~~~~~~~-~~~~f~v~-~G---~d~~~ 182 (286)
T 2r91_A 120 AVSIPVFLYNYPAAVGRDVDARAAKE--LGCIRGVKDTN----------ESLAHTLAYKR-YLPQARVY-NG---SDSLV 182 (286)
T ss_dssp HCSSCEEEEECHHHHSSCCCHHHHHH--HSCEEEEEECC----------SCHHHHHHHHH-HCTTSEEE-EC---CGGGH
T ss_pred hcCCCEEEEeChhhcCCCCCHHHHHh--cCCEEEEEeCC----------CCHHHHHHHHh-cCCCEEEE-Ec---cHHHH
Confidence 78999998775 45666555 12222332211 12344445555 54566654 45 23446
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
+.++++||+++.-+..
T Consensus 183 ~~~l~~G~~G~is~~a 198 (286)
T 2r91_A 183 FASFAVRLDGVVASSA 198 (286)
T ss_dssp HHHHHTTCSEECCGGG
T ss_pred HHHHHcCCCEEEecHH
Confidence 7889999999988874
No 350
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.65 E-value=0.22 Score=44.80 Aligned_cols=70 Identities=16% Similarity=0.241 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHcCCcEEEEcCC---CCCCCCCccchHHHHHHHH---HHhcCCCcEEE-----ecCCCCH--------HH
Q 017718 231 LTAEDARIAVQAGAAGIIVSNH---GARQLDYVPATIMALEEVV---KATQGRIPVFL-----DGGVRRG--------TD 291 (367)
Q Consensus 231 ~~~~~a~~~~~~G~d~i~vs~~---gg~~~~~~~~~~~~l~~i~---~~~~~~~~via-----~GGI~~~--------~d 291 (367)
.+.++|..|.+.|||-|-+-.. ||.+ |+...+.+++ +.+ ++||.+ .|++... +|
T Consensus 9 ~s~~~a~~A~~~GAdRIELc~~L~~GGlT-----PS~g~i~~~~~~~~~~--~ipV~vMIRPR~GdF~Ys~~E~~~M~~D 81 (224)
T 2bdq_A 9 ENLTDLTRLDKAIISRVELCDNLAVGGTT-----PSYGVIKEANQYLHEK--GISVAVMIRPRGGNFVYNDLELRIMEED 81 (224)
T ss_dssp ETTTTGGGCCTTTCCEEEEEBCGGGTCBC-----CCHHHHHHHHHHHHHT--TCEEEEECCSSSSCSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCcccCCcC-----CCHHHHHHHHHhhhhc--CCceEEEECCCCCCCcCCHHHHHHHHHH
Confidence 5778899999999999998542 4433 5566666665 665 789888 5666554 36
Q ss_pred HHHHHHcCCCEEEech
Q 017718 292 VFKALALGASGIFIGR 307 (367)
Q Consensus 292 v~kal~lGAd~V~ig~ 307 (367)
+..+..+|||+|.+|-
T Consensus 82 i~~~~~~GadGvV~G~ 97 (224)
T 2bdq_A 82 ILRAVELESDALVLGI 97 (224)
T ss_dssp HHHHHHTTCSEEEECC
T ss_pred HHHHHHcCCCEEEEee
Confidence 7777889999999994
No 351
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=90.60 E-value=1.3 Score=42.86 Aligned_cols=133 Identities=17% Similarity=0.150 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.+++...|.. .+++. +. ++... +...
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~----~~~~~-~g-------------------g~~~~-------~~~~ 184 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSA----LQHVT-RR-------------------SMSAE-------AIEL 184 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTE----EECCB-TT-------------------BCCHH-------HHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccccccc----ccccc-cC-------------------Ccchh-------hHHH
Confidence 467777778888889999999988765432110 00000 00 00000 0011
Q ss_pred c---HHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 213 S---WKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 ~---~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
+ .+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||+
T Consensus 185 ~~e~v~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~ipIa 254 (392)
T 2poz_A 185 AYRRVKAVRDAAGPEIELMVDLSGGLTTDETIRFCRKIGELDICFVEE--------PCDPFDNGALKVISEQI--PLPIA 254 (392)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTCHHHHHHHHHHC--SSCEE
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEE
Confidence 1 23677766 578888753 35555 44556667665531 11234677888888776 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEec
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
+++.+.+..++.+++..| +|.|++-
T Consensus 255 ~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 255 VGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp ECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred ecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999987 8999873
No 352
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=90.51 E-value=5.6 Score=37.88 Aligned_cols=116 Identities=16% Similarity=0.125 Sum_probs=78.1
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.||+++-++++.+. + .+
T Consensus 144 ~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~---~--------------------------------------------~~ 176 (371)
T 2ps2_A 144 VGEPEDMRARVAKYRAKGYKGQSVKISGEP---V--------------------------------------------TD 176 (371)
T ss_dssp SCCHHHHHHHHHHHHTTTCCEEEEECCSCH---H--------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHHhChheEEeecCCCH---H--------------------------------------------HH
Confidence 357888888888888999999988765210 0 00
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHHH----HHH-HHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAEDA----RIA-VQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~-~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
. -.+.+|+.. +++|.+..- .+.+++ +.+ .+.|+ .|- +. -+ .++.+.++++.+ ++||+
T Consensus 177 ~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE-------~P--~~-~~~~~~~l~~~~--~iPI~ 243 (371)
T 2ps2_A 177 AKRITAALANQQPDEFFIVDANGKLSVETALRLLRLLPHGLDF-ALE-------AP--CA-TWRECISLRRKT--DIPII 243 (371)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTBCCHHHHHHHHHHSCTTCCC-EEE-------CC--BS-SHHHHHHHHTTC--CSCEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCcCHHHHHHHHHHHHhhcCC-cCc-------CC--cC-CHHHHHHHHhhC--CCCEE
Confidence 0 122566655 467777653 355554 334 45565 432 11 11 667777777655 79999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+++.+.+..|+.+++..| +|.|++--
T Consensus 244 ~dE~~~~~~~~~~~i~~~~~d~v~ik~ 270 (371)
T 2ps2_A 244 YDELATNEMSIVKILADDAAEGIDLKI 270 (371)
T ss_dssp ESTTCCSHHHHHHHHHHTCCSEEEEEH
T ss_pred eCCCcCCHHHHHHHHHhCCCCEEEech
Confidence 999999999999999987 89999864
No 353
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=90.47 E-value=0.25 Score=44.00 Aligned_cols=58 Identities=14% Similarity=0.154 Sum_probs=38.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH---H------HHHHHHcCCCEEEe
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT---D------VFKALALGASGIFI 305 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~---d------v~kal~lGAd~V~i 305 (367)
.|+. .+.|+| ++.+. +.+.++++.++ .+ +..+||+-.. | ..+ +..|||.+.+
T Consensus 131 ~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~~~-i~aGad~iVv 191 (213)
T 1vqt_A 131 IEKL-NKLGCD-FVLPG-------------PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTLEE-MKGIANFAVL 191 (213)
T ss_dssp HHHH-HHHTCE-EECCH-------------HHHHHHTTTCC--SC-EEECCBC---------CCBCHHH-HTTTCSEEEE
T ss_pred HHHH-hcCCCE-EEEcH-------------HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCHHH-HHCCCCEEEE
Confidence 3666 889999 55421 34455554443 35 8889996432 2 567 8899999999
Q ss_pred chHHHH
Q 017718 306 GRPVVY 311 (367)
Q Consensus 306 g~~~l~ 311 (367)
||+++.
T Consensus 192 GR~I~~ 197 (213)
T 1vqt_A 192 GREIYL 197 (213)
T ss_dssp SHHHHT
T ss_pred ChhhcC
Confidence 999975
No 354
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=90.31 E-value=2.8 Score=39.67 Aligned_cols=87 Identities=13% Similarity=0.080 Sum_probs=59.0
Q ss_pred CCceEEEEee------cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccc
Q 017718 122 PGIRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (367)
Q Consensus 122 ~~~~~~QLy~------~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (367)
.-+.++.|-. +.+.+...+++++++++|++.|.++-..... .. .|.
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~--------~~--~~~------------------ 260 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVH--------AD--INV------------------ 260 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSC--------CC--CCC------------------
T ss_pred CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc--------CC--CCC------------------
Confidence 4467777654 2346677788999999999999886532100 00 000
Q ss_pred cchhhHHHhhhccCccccH---HHHHhhcCCCEEEEecC-CHHHHHHHHHcC-CcEEEE
Q 017718 196 NDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKGVL-TAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~v~-~~~~a~~~~~~G-~d~i~v 249 (367)
.+...| ..+|+.+++||+.-+.. +.+++..+++.| +|.|.+
T Consensus 261 -------------~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 261 -------------FPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp -------------CTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred -------------CccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEee
Confidence 011122 27888889999987764 899999999999 999988
No 355
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=90.20 E-value=0.95 Score=43.70 Aligned_cols=100 Identities=21% Similarity=0.193 Sum_probs=62.4
Q ss_pred CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHH
Q 017718 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (367)
Q Consensus 123 ~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (367)
.|.++.+-+.-+.+.+.++++.++++|+++|.++--+.. |.. ...|. ..+. .+.-++.
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~---r~~-----~~~~~---~~~~---------~gGlSG~-- 278 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVS---RPA-----GLQGA---LRSE---------TGGLSGK-- 278 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSC---CCT-----TCCCT---TTTS---------SSEEEEG--
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcc---ccc-----ccccc---cccc---------cCCcCCc--
Confidence 578888876667778889999999999999987532211 100 00000 0000 0000000
Q ss_pred HhhhccCccccHH---HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 203 YVAGQIDRSLSWK---WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 203 ~~~~~~d~~~~~~---~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
.....+|+ .+++.+ ++||+.-+ +.+.++|..+.++|||+|.+
T Consensus 279 -----~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 279 -----PLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp -----GGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred -----ccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 01112333 677777 79988765 57899999999999999998
No 356
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=90.12 E-value=2.1 Score=39.83 Aligned_cols=83 Identities=28% Similarity=0.305 Sum_probs=55.1
Q ss_pred HHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCC---CCCCCCC--ccchHHHHHHHHHHhcCCCcEEEecCCCC--H
Q 017718 217 LQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNH---GARQLDY--VPATIMALEEVVKATQGRIPVFLDGGVRR--G 289 (367)
Q Consensus 217 l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~---gg~~~~~--~~~~~~~l~~i~~~~~~~~~via~GGI~~--~ 289 (367)
+.+..+.++++ .+...+.|+.+.++|+|+|.+-+. --+...+ .....+.+.++++.+ .+||++ +++. -
T Consensus 16 ~~~~~~~g~i~-~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~--~iPv~~--k~r~g~~ 90 (305)
T 2nv1_A 16 MAEMQKGGVIM-DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAV--SIPVMA--KARIGHI 90 (305)
T ss_dssp HHHTTTTCEEE-EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHC--SSCEEE--EECTTCH
T ss_pred HHHHccCCeee-cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhC--CCCEEe--cccccch
Confidence 33445678887 667788999999999999943220 0000111 223567788887766 799985 4444 6
Q ss_pred HHHHHHHHcCCCEEE
Q 017718 290 TDVFKALALGASGIF 304 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ 304 (367)
.++..++++|||+|.
T Consensus 91 ~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 91 VEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHCCCCEEE
Confidence 667777789999996
No 357
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=90.11 E-value=12 Score=34.89 Aligned_cols=178 Identities=11% Similarity=0.093 Sum_probs=98.1
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hhCC-CceEEEEeecCCHHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------STGP-GIRFFQLYVYKDRNVVA 139 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~~~-~~~~~QLy~~~d~~~~~ 139 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.+|-. +... -|.+...- ..+-....
T Consensus 14 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~ai 92 (313)
T 3dz1_A 14 AIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAMR 92 (313)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHHH
Confidence 4556676433323333334666677778875432 3 33556666522 2222 35556654 35666777
Q ss_pred HHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHHh
Q 017718 140 QLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT 219 (367)
Q Consensus 140 ~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 219 (367)
++.+.|+++|++++.+. .|.. + | + ..++.+ .++.|.+
T Consensus 93 ~la~~A~~~Gadavlv~--~P~~--~----------~------s-------------~~~l~~----------~f~~va~ 129 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIA--PPPS--L----------R------T-------------DEQITT----------YFRQATE 129 (313)
T ss_dssp HHHHHHHHHTCSEEEEC--CCTT--C----------C------S-------------HHHHHH----------HHHHHHH
T ss_pred HHHHHHHHcCCCEEEEC--CCCC--C----------C------C-------------HHHHHH----------HHHHHHH
Confidence 88999999999999872 2321 0 0 0 001111 1346767
Q ss_pred hcC--CCEEEEec-------CCHHHHHHHHH-cC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhc----CCCcEEEec
Q 017718 220 ITK--LPILVKGV-------LTAEDARIAVQ-AG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQ----GRIPVFLDG 284 (367)
Q Consensus 220 ~~~--~Pv~vK~v-------~~~~~a~~~~~-~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~----~~~~via~G 284 (367)
.++ +||++=.+ .+++...++.+ .. +-+|--+ .......+.++.+..+ .++.|+. |
T Consensus 130 a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKd~---------~~~~~~~~~~~~~~~~~~~~~~f~v~~-G 199 (313)
T 3dz1_A 130 AIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHE---------DWPGLEKITTLRGFQKDGSLRPLSILC-G 199 (313)
T ss_dssp HHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEEEEC---------CSSCHHHHHHHHHHHHHTSSCCCEEEE-C
T ss_pred hCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEcC---------CCCCHHHHHHHHHhcCccCCCCeEEEe-C
Confidence 777 99998765 56788777764 32 3233321 1123444555555443 4565553 3
Q ss_pred CCCCHHHHHH-HHHcCCCEEEech
Q 017718 285 GVRRGTDVFK-ALALGASGIFIGR 307 (367)
Q Consensus 285 GI~~~~dv~k-al~lGAd~V~ig~ 307 (367)
. ....+- ++++||+++..|.
T Consensus 200 ~---d~~~l~~~l~~G~~G~i~~~ 220 (313)
T 3dz1_A 200 N---GGLFLDFEMERGADGAMTGY 220 (313)
T ss_dssp G---GGTTHHHHHHHTCCEEEECC
T ss_pred C---cHHHHHHHHHCCCcEEEeCc
Confidence 1 112344 5899999998775
No 358
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=90.05 E-value=1.1 Score=41.50 Aligned_cols=87 Identities=13% Similarity=0.165 Sum_probs=50.7
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCcc-chHHHHHHHHHHhcCCCcEEE-ecCCCCHHHHHH----HHHcCCCEEEechHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVP-ATIMALEEVVKATQGRIPVFL-DGGVRRGTDVFK----ALALGASGIFIGRPV 309 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via-~GGI~~~~dv~k----al~lGAd~V~ig~~~ 309 (367)
++.+.+.|+|+|++.|+.|-...-.. -..+++..+++.+.+ ||+ .|+..+ .++++ +-.+|||++++-.|+
T Consensus 25 v~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t-~~ai~la~~A~~~Gadavlv~~P~ 100 (286)
T 2r91_A 25 VKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNA-DEAIALAKYAESRGAEAVASLPPY 100 (286)
T ss_dssp HHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSH-HHHHHHHHHHHHTTCSEEEECCSC
T ss_pred HHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCH-HHHHHHHHHHHhcCCCEEEEcCCc
Confidence 56678899999999765442111111 123445555565543 554 554444 44442 334799999999998
Q ss_pred HHH-hhccChHHHHHHHHHHH
Q 017718 310 VYS-LAAEGEKGVRRVLEMLR 329 (367)
Q Consensus 310 l~~-l~~~G~~~v~~~i~~l~ 329 (367)
++. . .++++.++++.+.
T Consensus 101 y~~~~---s~~~l~~~f~~va 118 (286)
T 2r91_A 101 YFPRL---SERQIAKYFRDLC 118 (286)
T ss_dssp SSTTC---CHHHHHHHHHHHH
T ss_pred CCCCC---CHHHHHHHHHHHH
Confidence 763 2 3555555554443
No 359
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=90.02 E-value=5.1 Score=37.87 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=76.7
Q ss_pred CCHHHHHHHH-HcCCcEEEEcC---CCCCCCCCccc----hHHHHHHHHHHhcCCCcEEEecCC----------------
Q 017718 231 LTAEDARIAV-QAGAAGIIVSN---HGARQLDYVPA----TIMALEEVVKATQGRIPVFLDGGV---------------- 286 (367)
Q Consensus 231 ~~~~~a~~~~-~~G~d~i~vs~---~gg~~~~~~~~----~~~~l~~i~~~~~~~~~via~GGI---------------- 286 (367)
.++++|.... +.|+|.+-++- ||-+... +.+ .++.|.+|.+.+ ++|+..=||=
T Consensus 153 TdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~-~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~~gg~ 229 (323)
T 2isw_A 153 TEPQDAKKFVELTGVDALAVAIGTSHGAYKFK-SESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINKYGGK 229 (323)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCC-C----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHCCCEEEEecCccccccCCC-CCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHHhccc
Confidence 6788877665 79999999963 6654322 233 367899999888 7999998843
Q ss_pred ------CCHHHHHHHHHcCCCEEEechHHHHHhhc-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017718 287 ------RRGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 287 ------~~~~dv~kal~lGAd~V~ig~~~l~~l~~-------~G-----~-~~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
..-+++.|++.+|..-|=|+|-+-++... +. + .-+....+.+++.++..|..+|+.
T Consensus 230 ~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~dpr~~l~~~~~a~~~~v~~~~~~~gs~ 304 (323)
T 2isw_A 230 MPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHPEKFDPRDYLGPGRDAITEMLIPKIKAFGSA 304 (323)
T ss_dssp CTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCTHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23478999999999999999976554321 11 1 123344567888888889999874
No 360
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=89.90 E-value=6.9 Score=36.69 Aligned_cols=110 Identities=19% Similarity=0.171 Sum_probs=74.8
Q ss_pred CCHHHHHHH-HHcCCcEEEEcC---CCCCCCCCcc-chHHHHHHHHHHhcCCCcEEEecCC-------------------
Q 017718 231 LTAEDARIA-VQAGAAGIIVSN---HGARQLDYVP-ATIMALEEVVKATQGRIPVFLDGGV------------------- 286 (367)
Q Consensus 231 ~~~~~a~~~-~~~G~d~i~vs~---~gg~~~~~~~-~~~~~l~~i~~~~~~~~~via~GGI------------------- 286 (367)
.++++|... .+.|+|.+-++- ||-+...+.| -.++.|.+|.+.. ++|+..=||=
T Consensus 155 T~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~vp~~~~~~~~~~gg~~~~ 232 (307)
T 3n9r_A 155 VNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASAIPDNVRKSYLDAGGDLKG 232 (307)
T ss_dssp CCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCCCCHHHHHHHHHTTCCCTT
T ss_pred CCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCCcchHHHHHHHHhcCccCC
Confidence 578888775 469999999863 6654322222 3778899996655 6999997753
Q ss_pred ---CCHHHHHHHHHcCCCEEEechHHHHHhhc-------cC-----h-HHHHHHHHHHHHHHHHHHHHhCCC
Q 017718 287 ---RRGTDVFKALALGASGIFIGRPVVYSLAA-------EG-----E-KGVRRVLEMLREEFELAMALSGCR 342 (367)
Q Consensus 287 ---~~~~dv~kal~lGAd~V~ig~~~l~~l~~-------~G-----~-~~v~~~i~~l~~el~~~m~~~G~~ 342 (367)
..-+++.|++.+|-.-|=|+|-+-++... +. + .-+....+.+++.++..|..+|+.
T Consensus 233 ~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~~~~dpr~~~~~~~~a~~~~v~~~~~~~gs~ 304 (307)
T 3n9r_A 233 SKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSA 304 (307)
T ss_dssp CBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23578889999999999999977554221 11 1 123333456777777888888864
No 361
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=89.79 E-value=4.2 Score=39.39 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=56.5
Q ss_pred HHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHH
Q 017718 217 LQTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKAL 296 (367)
Q Consensus 217 l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal 296 (367)
.++..+++++ -.+++.+.+..+.+.|+|.+-+.. .-...+.+|.++.+ ...|||.+-|..|-+++..|.
T Consensus 109 ~~~~~Gi~~~-stpfD~~svd~l~~~~vd~~KIgS-------~~~~N~pLL~~va~---~gKPViLStGmaTl~Ei~~Av 177 (385)
T 1vli_A 109 YCREKQVIFL-STVCDEGSADLLQSTSPSAFKIAS-------YEINHLPLLKYVAR---LNRPMIFSTAGAEISDVHEAW 177 (385)
T ss_dssp HHHHTTCEEE-CBCCSHHHHHHHHTTCCSCEEECG-------GGTTCHHHHHHHHT---TCSCEEEECTTCCHHHHHHHH
T ss_pred HHHHcCCcEE-EccCCHHHHHHHHhcCCCEEEECc-------ccccCHHHHHHHHh---cCCeEEEECCCCCHHHHHHHH
Confidence 3345677774 467899999999999999999832 11335667777654 278999999999999988776
Q ss_pred H----cCCCEEEe
Q 017718 297 A----LGASGIFI 305 (367)
Q Consensus 297 ~----lGAd~V~i 305 (367)
. .|.+-|.+
T Consensus 178 e~i~~~Gn~~iiL 190 (385)
T 1vli_A 178 RTIRAEGNNQIAI 190 (385)
T ss_dssp HHHHTTTCCCEEE
T ss_pred HHHHHCCCCcEEE
Confidence 4 47744444
No 362
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=89.75 E-value=3.2 Score=40.47 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=84.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.++.+..+.. +. .+. .+. .+.++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~------g~-~~~-----------------------~~~----~~~d~ 188 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYS------GH-QLS-----------------------LEV----LDRCE 188 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTC------CB-CCC-----------------------HHH----HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcccc------cc-ccc-----------------------hhh----HHHHH
Confidence 477877777888888999999887765432100 00 000 000 01111
Q ss_pred -cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 -SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 -~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ .+||+++
T Consensus 189 ~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~d 258 (412)
T 4e4u_A 189 LFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEE--------PVPPGQEEAIAQVAKHT--SIPIATG 258 (412)
T ss_dssp HHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEEC--------CSCSSCHHHHHHHHHTC--SSCEEEC
T ss_pred HHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEEC--------CCChhhHHHHHHHHhhC--CCCEEec
Confidence 123777776 478888654 34555 45566778877752 11223577788887766 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEec
Q 017718 284 GGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
..+.+..|+.+++..| +|.|++-
T Consensus 259 E~~~~~~~~~~~i~~~a~d~v~~d 282 (412)
T 4e4u_A 259 ERLTTKYEFHKLLQAGGASILQLN 282 (412)
T ss_dssp TTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CccCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999987 7999885
No 363
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=89.74 E-value=1.6 Score=40.98 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~---GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+.++...++|||+|.+- + +++.+.+.++.+.+ ++|++++ +|-.-.-.+.+.-.+|.+.|..|...+
T Consensus 179 ~Ra~ay~eAGAD~i~~e--~-------~~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 247 (305)
T 3ih1_A 179 ERANAYVKAGADAIFPE--A-------LQSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSL 247 (305)
T ss_dssp HHHHHHHHHTCSEEEET--T-------CCSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEc--C-------CCCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCHHHHHHcCCCEEEEchHHH
Confidence 45788999999999993 2 35677888888888 6888763 443222234555578999999998776
Q ss_pred HH
Q 017718 311 YS 312 (367)
Q Consensus 311 ~~ 312 (367)
.+
T Consensus 248 ra 249 (305)
T 3ih1_A 248 RV 249 (305)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 364
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=89.71 E-value=7.4 Score=36.20 Aligned_cols=87 Identities=24% Similarity=0.386 Sum_probs=48.6
Q ss_pred cCCCEEEEecC--CHHH----HHHHHHcCCcEEEEcCCCCCCCCCcc--chHHHHHHHHHHhcCCCcEEEec--------
Q 017718 221 TKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFLDG-------- 284 (367)
Q Consensus 221 ~~~Pv~vK~v~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~~~via~G-------- 284 (367)
+++||++|..+ ++++ +..+...|-+-+++--.|++ ..... ..+..++.+++.. ..+||+.|.
T Consensus 131 ~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~-~~y~~~~~dl~~i~~lk~~~-~~~pV~~D~sH~~q~p~ 208 (292)
T 1o60_A 131 TGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTN-FGYDNLIVDMLGFSVMKKAS-KGSPVIFDVTHSLQCRD 208 (292)
T ss_dssp TTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE-CSTTCEECCTTHHHHHHHHT-TSCCEEEEHHHHCC---
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-CCCCccccCHHHHHHHHhhC-CCCCEEEECCCcccccC
Confidence 57788888764 3433 44556778765655433432 11111 2445566555543 158999942
Q ss_pred ---CCCCH-----HHHH-HHHHcCCCEEEechHH
Q 017718 285 ---GVRRG-----TDVF-KALALGASGIFIGRPV 309 (367)
Q Consensus 285 ---GI~~~-----~dv~-kal~lGAd~V~ig~~~ 309 (367)
+-..+ ..+. .+.++||++++|=+-+
T Consensus 209 ~~~~~~~g~~~~~~~ia~aAva~Ga~Gl~IE~H~ 242 (292)
T 1o60_A 209 PFGAASSGRRAQVTELARSGLAVGIAGLFLEAHP 242 (292)
T ss_dssp ---------CTTHHHHHHHHHHHCCSEEEEEEES
T ss_pred ccccCCCCChhHHHHHHHHHHHcCCCEEEEEecC
Confidence 33334 2333 5677999999998854
No 365
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=89.46 E-value=2.9 Score=39.81 Aligned_cols=90 Identities=17% Similarity=0.156 Sum_probs=56.1
Q ss_pred CCceEEEEeecCC----HHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccc
Q 017718 122 PGIRFFQLYVYKD----RNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAND 197 (367)
Q Consensus 122 ~~~~~~QLy~~~d----~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (367)
.-|..+.+-.+.+ .+...+++++++++|+++|.++-..... ++. +.
T Consensus 126 ~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~---------g~~-g~-------------------- 175 (350)
T 3b0p_A 126 RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALL---------ALS-TK-------------------- 175 (350)
T ss_dssp SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC------------------------------------
T ss_pred CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhc---------ccC-cc--------------------
Confidence 3456665533222 2356778899999999999886432110 110 00
Q ss_pred hhhHHHhhhccCccccHH---HHHhhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEE
Q 017718 198 SGLAAYVAGQIDRSLSWK---WLQTIT-KLPILVKGV-LTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 198 ~~~~~~~~~~~d~~~~~~---~l~~~~-~~Pv~vK~v-~~~~~a~~~~~~G~d~i~v 249 (367)
. .+ ..+..+|+ .+++.+ ++||++-+- .+.+++..+.+ |+|+|.+
T Consensus 176 ---~---~~-~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 176 ---A---NR-EIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp -----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSSEEEE
T ss_pred ---c---cc-CCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCCEEEE
Confidence 0 00 01123454 677888 899988775 68999999998 9999998
No 366
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=89.44 E-value=6.9 Score=35.03 Aligned_cols=84 Identities=19% Similarity=0.283 Sum_probs=53.5
Q ss_pred HHHHhhcCCCEEEEec-C-----C-HHHH----HHHHHcCCcEEEEcCCCCC--CCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 215 KWLQTITKLPILVKGV-L-----T-AEDA----RIAVQAGAAGIIVSNHGAR--QLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-~-----~-~~~a----~~~~~~G~d~i~vs~~gg~--~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
+.+++.+++|++ |-. . . .+++ ..+.+..+|++.+...||+ .+|| +.+..+.. +.|+|
T Consensus 108 ~~l~~~~~~~vi-Ka~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~GGtG~~fDW-----~~~~~~~~----~~p~i 177 (228)
T 4aaj_A 108 DTLKKEFGVFVM-KAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTGAGSGKLHDL-----RVSSLVAR----KIPVI 177 (228)
T ss_dssp HHHHHHHCCEEE-EEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC-------CCC-----HHHHHHHH----HSCEE
T ss_pred HHHhhccCceEE-EEEEecccccchhhhHHHHHHHHhccCCCEEccCCCCCCcCcCCh-----HHHHHhhh----cCCeE
Confidence 366677777774 432 1 1 2232 3345567999999876665 3444 45555433 47999
Q ss_pred EecCCCCHHHHHHHHH-cCCCEEEechHH
Q 017718 282 LDGGVRRGTDVFKALA-LGASGIFIGRPV 309 (367)
Q Consensus 282 a~GGI~~~~dv~kal~-lGAd~V~ig~~~ 309 (367)
.+||+ +++.|.+++. .+..+|=+.+.+
T Consensus 178 LAGGL-~peNV~~Ai~~~~P~gVDVsSGV 205 (228)
T 4aaj_A 178 VAGGL-NAENVEEVIKVVKPYGVDVSSGV 205 (228)
T ss_dssp EESSC-CTTTHHHHHHHHCCSEEEESGGG
T ss_pred EECCC-CHHHHHHHHHHhCCCEEEeCCCC
Confidence 99999 5788999987 799999888843
No 367
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=89.23 E-value=3.3 Score=40.35 Aligned_cols=128 Identities=12% Similarity=0.039 Sum_probs=83.2
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++=+ ++++..+. . . . ...+ +.+
T Consensus 123 ~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~---------------~----~------~--------~~~~----~~d 164 (405)
T 3rr1_A 123 GDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI---------------I----D------T--------SRAV----DAA 164 (405)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC---------------B----C------S--------HHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc---------------c----c------c--------chhH----HHH
Confidence 456788888888888899999887 65442100 0 0 0 0000 111
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+ ..+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ .+||++
T Consensus 165 ~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~ 234 (405)
T 3rr1_A 165 VARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEE--------PVLAEQAETYARLAAHT--HLPIAA 234 (405)
T ss_dssp HHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEEC--------SSCCSSTHHHHHHHTTC--SSCEEE
T ss_pred HHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhcC--CCCEEe
Confidence 1 123777776 578888753 35555 45566778777642 11123566777777655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 235 dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 235 GERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp CTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred cCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 99999999999999986 89998853
No 368
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=89.17 E-value=2.8 Score=39.25 Aligned_cols=83 Identities=23% Similarity=0.348 Sum_probs=57.5
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-C-C---CCCCccchHH----HHHHHHHHhcCCCcEEEec--CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g-~---~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~~~~ 290 (367)
+.|+++=++-+.-.|+.+.++|+|+|.+++.+ + . ..|.++.+++ .+..|.+.. ++||++|. |..++.
T Consensus 21 ~~~i~~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~--~~PviaD~d~Gyg~~~ 98 (298)
T 3eoo_A 21 EQPLQVVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT--NLPLLVDIDTGWGGAF 98 (298)
T ss_dssp SSSEEEEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC--CSCEEEECTTCSSSHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc--CCeEEEECCCCCCCHH
Confidence 56898888899999999999999999997621 1 0 1344544433 344555544 79999976 444666
Q ss_pred HHH----HHHHcCCCEEEec
Q 017718 291 DVF----KALALGASGIFIG 306 (367)
Q Consensus 291 dv~----kal~lGAd~V~ig 306 (367)
++. +.+..||.+|.|=
T Consensus 99 ~v~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 99 NIARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCeEEEEC
Confidence 654 3445899999764
No 369
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=89.07 E-value=5.9 Score=37.85 Aligned_cols=77 Identities=9% Similarity=0.068 Sum_probs=56.9
Q ss_pred HhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH
Q 017718 218 QTITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA 297 (367)
Q Consensus 218 ~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~ 297 (367)
++..+++++ -.+++.+++..+.+.|+|.+-+.. .-...+.+|.++.+ ...|||.+-|..|-+++..|..
T Consensus 100 ~~~~Gi~~~-st~~d~~svd~l~~~~v~~~KI~S-------~~~~n~~LL~~va~---~gkPviLstGmat~~Ei~~Ave 168 (349)
T 2wqp_A 100 VESKGMIFI-STLFSRAAALRLQRMDIPAYKIGS-------GECNNYPLIKLVAS---FGKPIILSTGMNSIESIKKSVE 168 (349)
T ss_dssp HHHTTCEEE-EEECSHHHHHHHHHHTCSCEEECG-------GGTTCHHHHHHHHT---TCSCEEEECTTCCHHHHHHHHH
T ss_pred HHHhCCeEE-EeeCCHHHHHHHHhcCCCEEEECc-------ccccCHHHHHHHHh---cCCeEEEECCCCCHHHHHHHHH
Confidence 345678774 467899999999999999999832 11335677777654 2789999999999999877664
Q ss_pred ----cCCCEEEe
Q 017718 298 ----LGASGIFI 305 (367)
Q Consensus 298 ----lGAd~V~i 305 (367)
.|.+.+.+
T Consensus 169 ~i~~~G~~iiLl 180 (349)
T 2wqp_A 169 IIREAGVPYALL 180 (349)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 47765543
No 370
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=89.06 E-value=1.8 Score=42.41 Aligned_cols=117 Identities=15% Similarity=0.174 Sum_probs=78.9
Q ss_pred CCH-HHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 133 KDR-NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 133 ~d~-~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
.++ +.+.+.++++.+.||+++=+.++... + .+
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~--------------------------------------------~d 215 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGDAA---R--------------------------------------------VD 215 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCSCH---H--------------------------------------------HH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCCCH---H--------------------------------------------HH
Confidence 456 77777788888899999887655310 0 00
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCC-CcEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGR-IPVF 281 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~-~~vi 281 (367)
. -.+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ . +||+
T Consensus 216 ~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~~iPIa 285 (428)
T 3bjs_A 216 IERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEE--------PFACNDFASYREVAKIT--PLVPIA 285 (428)
T ss_dssp HHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTTCSCEEC--------CSCTTCHHHHHHHTTTC--SSSCEE
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCcEE
Confidence 0 122566655 477777643 34554 45677888887641 11223567777776655 6 9999
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEec
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig 306 (367)
+++.+.+..++.+++..| +|.|++-
T Consensus 286 ~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 286 AGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp ECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred cCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 999999999999999987 7888874
No 371
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=88.87 E-value=4.6 Score=45.68 Aligned_cols=120 Identities=15% Similarity=0.147 Sum_probs=84.2
Q ss_pred HHHHHHHHcCCcEEEEcCCC-CCCCCC---ccchHHHHHHHHHHh-----cCCCcEEE-ecCCCCHHHHHHHHHcCCCEE
Q 017718 234 EDARIAVQAGAAGIIVSNHG-ARQLDY---VPATIMALEEVVKAT-----QGRIPVFL-DGGVRRGTDVFKALALGASGI 303 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~g-g~~~~~---~~~~~~~l~~i~~~~-----~~~~~via-~GGI~~~~dv~kal~lGAd~V 303 (367)
++|..+++.|+..|++|..+ +...+. ..|.+-++..+..++ +.++-+++ +|-+|+.-|++-.+-.||++|
T Consensus 585 ~~a~~av~~g~~iliLsDr~~~~~~~~~~~~ip~lla~~avh~~Li~~~~R~~~~lvvesg~~r~~Hh~a~l~GyGA~av 664 (1520)
T 1ofd_A 585 KTAIATVQAGAEILVLTDRPNGAILTENQSFIPPLLAVGAVHHHLIRAGLRLKASLIVDTAQCWSTHHFACLVGYGASAI 664 (1520)
T ss_dssp HHHHHHHHTTCSEEEEESSGGGCCCCTTEEECCHHHHHHHHHHHHHHTTCGGGCEEEEECSSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHCCCcEEEEcCCCCcCCCCCCccCcCHHHHHHHHHHHHHhcCCcccccEEEEeCCcChHHHHHHHHHcchhhh
Confidence 45788899999999999865 211222 233444444444332 33677777 778999999999999999999
Q ss_pred EechHH--HHHh---------hccC-------hHHHHHHHHHHHHHHHHHHHHhCCCChhhhccccee
Q 017718 304 FIGRPV--VYSL---------AAEG-------EKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 353 (367)
Q Consensus 304 ~ig~~~--l~~l---------~~~G-------~~~v~~~i~~l~~el~~~m~~~G~~si~~l~~~~l~ 353 (367)
.=.-++ +..+ ...| ++.+.++++.+.+.|...|..+|.+.++.-++.-+.
T Consensus 665 ~Pyla~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ny~~a~~~Gl~KimskmGIst~~sY~gaqiF 732 (1520)
T 1ofd_A 665 CPYLALESVRQWWLDEKTQKLMENGRLDRIDLPTALKNYRQSVEAGLFKILSKMGISLLASYHGAQIF 732 (1520)
T ss_dssp ECHHHHHHHHHHHSCHHHHHHHTTSSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCCBHHHHHTCCCE
T ss_pred cHHHHHHHHHHHHhcccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhccHhhhhhcCCceee
Confidence 644333 2222 1122 357889999999999999999999999998877654
No 372
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=88.65 E-value=4.3 Score=38.91 Aligned_cols=81 Identities=10% Similarity=0.050 Sum_probs=56.2
Q ss_pred HHHhhc--CCCEEEEec--CCHHHHH----HHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~a~----~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +.++.+..- .+.++|. .+.+.|++.|- + ...+..++.+.++++.. .+||+++..+.
T Consensus 189 avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 258 (372)
T 3tj4_A 189 AVRERVDSAVRIAIDGNGKWDLPTCQRFCAAAKDLDIYWFE-------E-PLWYDDVTSHARLARNT--SIPIALGEQLY 258 (372)
T ss_dssp HHHHHSCTTCEEEEECTTCCCHHHHHHHHHHTTTSCEEEEE-------S-CSCTTCHHHHHHHHHHC--SSCEEECTTCC
T ss_pred HHHHHcCCCCcEEeeCCCCCCHHHHHHHHHHHhhcCCCEEE-------C-CCCchhHHHHHHHHhhc--CCCEEeCCCcc
Confidence 677766 467877653 3556553 33444544442 1 11223577788887776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEec
Q 017718 288 RGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig 306 (367)
+..|+.+++..| +|.|++-
T Consensus 259 ~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 259 TVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp SHHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCCEEEeC
Confidence 999999999987 7998884
No 373
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=88.64 E-value=3.1 Score=39.09 Aligned_cols=82 Identities=21% Similarity=0.231 Sum_probs=57.3
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-----CCCCCCccchHH----HHHHHHHHhcCCCcEEEec--CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-----ARQLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-----g~~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~~~~ 290 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ | ..|.++.+++ .+..|.+.. ++||++|. |..++.
T Consensus 28 ~~~i~~~~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G-~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~d~Gyg~~~ 104 (305)
T 3ih1_A 28 NEILQIPGAHDAMAALVARNTGFLALYLSGAAYTASKG-LPDLGIVTSTEVAERARDLVRAT--DLPVLVDIDTGFGGVL 104 (305)
T ss_dssp SSCEEEEBCSSHHHHHHHHHTTCSCEEECHHHHHHHHT-CCSSSCSCHHHHHHHHHHHHHHH--CCCEEEECTTCSSSHH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEECcHHHHHhCC-CCCCCcCCHHHHHHHHHHHHHhc--CCCEEEECCCCCCCHH
Confidence 56888888889999999999999999997621 2 2344444432 345555555 78999976 455556
Q ss_pred HHHH----HHHcCCCEEEec
Q 017718 291 DVFK----ALALGASGIFIG 306 (367)
Q Consensus 291 dv~k----al~lGAd~V~ig 306 (367)
++.+ ....||++|.|=
T Consensus 105 ~v~~~v~~l~~aGaagv~iE 124 (305)
T 3ih1_A 105 NVARTAVEMVEAKVAAVQIE 124 (305)
T ss_dssp HHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHhCCcEEEEC
Confidence 6543 445899999763
No 374
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.61 E-value=1.8 Score=38.76 Aligned_cols=86 Identities=15% Similarity=0.001 Sum_probs=55.3
Q ss_pred HHHHhhcCCCEEEEec-CCH-HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 215 KWLQTITKLPILVKGV-LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-~~~-~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
+.+|+.++.|+.+-.. .++ +..+.+.++|+|+|+++. ... ......+.++.+++ . .+.+..+=...|+.+.
T Consensus 55 ~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~vh~--e~~--~~~~~~~~~~~i~~-~--g~~~gv~~~p~t~~e~ 127 (230)
T 1tqj_A 55 DAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHV--EHN--ASPHLHRTLCQIRE-L--GKKAGAVLNPSTPLDF 127 (230)
T ss_dssp HHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEEEC--STT--TCTTHHHHHHHHHH-T--TCEEEEEECTTCCGGG
T ss_pred HHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEECc--ccc--cchhHHHHHHHHHH-c--CCcEEEEEeCCCcHHH
Confidence 3777777778774433 343 247889999999999942 200 01123345555543 2 3444444456788888
Q ss_pred HHHHHcCCCEEEech
Q 017718 293 FKALALGASGIFIGR 307 (367)
Q Consensus 293 ~kal~lGAd~V~ig~ 307 (367)
++.+..++|.|.+++
T Consensus 128 ~~~~~~~~D~v~~ms 142 (230)
T 1tqj_A 128 LEYVLPVCDLILIMS 142 (230)
T ss_dssp GTTTGGGCSEEEEES
T ss_pred HHHHHhcCCEEEEEE
Confidence 888888999998887
No 375
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=88.50 E-value=2.1 Score=40.40 Aligned_cols=100 Identities=18% Similarity=0.065 Sum_probs=60.2
Q ss_pred CceEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHH
Q 017718 123 GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (367)
Q Consensus 123 ~~~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (367)
-|.++.+-...+.+.+.++++.++++|+++|.++-.+.. |+ +.+ .+. . .+ . ...-++.
T Consensus 212 ~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~---~~-~~~----~~~-~--~~--------~-~gg~~g~-- 269 (336)
T 1f76_A 212 VPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLD---RS-LVQ----GMK-N--CD--------Q-TGGLSGR-- 269 (336)
T ss_dssp CCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCC---CT-TST----TST-T--TT--------C-SSEEEEG--
T ss_pred CceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCccc---cc-ccc----ccc-c--cc--------c-CCCcCCc--
Confidence 578888765455666788899999999999998643211 11 110 000 0 00 0 0000000
Q ss_pred HhhhccCccccHH---HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 203 YVAGQIDRSLSWK---WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 203 ~~~~~~d~~~~~~---~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
......|+ .+++.+ ++||+.-+ +.+.+++..+.++|||+|.+
T Consensus 270 -----~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 270 -----PLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQI 317 (336)
T ss_dssp -----GGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred -----hhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHCCCCEEEe
Confidence 00011222 677777 79988765 47899999999999999988
No 376
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.30 E-value=17 Score=34.06 Aligned_cols=181 Identities=13% Similarity=0.115 Sum_probs=100.4
Q ss_pred ceEeCccc-chhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 73 PIMIAPTA-MQKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 73 Pi~iAPm~-~~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
|-++.|+. -.+-.+.+.-..+.+-.-+.|+...+ | +..+.+.+|-. +. .. -|.+...- ..+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 44566664 23333333334666667777876433 3 33556666522 22 22 46666654 456677
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|..-.+ |. + ..++.+ .++.+
T Consensus 95 ai~la~~a~~~Gadavlv~--~P~y~~k----------p~--~----------------~~~l~~----------~f~~i 134 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVL--PPAYFGK----------AT--T----------------PPVIKS----------FFDDV 134 (318)
T ss_dssp HHHHHHHHHHHTCSEEEEC--CCCC-------------CC--C----------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEEe--CCcccCC----------CC--C----------------HHHHHH----------HHHHH
Confidence 7789999999999999872 2321000 00 0 001111 23467
Q ss_pred HhhcCCCEEEEec--------CCHHHHHHHHH-cC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhc-CCCcEEEecCC
Q 017718 218 QTITKLPILVKGV--------LTAEDARIAVQ-AG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGV 286 (367)
Q Consensus 218 ~~~~~~Pv~vK~v--------~~~~~a~~~~~-~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~~~via~GGI 286 (367)
.+.+++||++=.+ .+++...++.+ .. +-+|--+ . ..+..+.++.+.+. +++.|+. |
T Consensus 135 a~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKds--s--------gd~~~~~~~~~~~~~~~f~v~~-G-- 201 (318)
T 3qfe_A 135 SCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLT--C--------ASVGKITRLAATLPPAAFSVFG-G-- 201 (318)
T ss_dssp HHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEES--S--------CCHHHHHHHHHHSCGGGCEEEE-S--
T ss_pred HhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeC--C--------CCHHHHHHHHHhcCCCCEEEEE-e--
Confidence 6778899988665 35677777776 43 2222221 1 13444555555442 3455543 4
Q ss_pred CCHHHHHHHHHcCCCEEEechH
Q 017718 287 RRGTDVFKALALGASGIFIGRP 308 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~ 308 (367)
+....+.++++||+++.-+..
T Consensus 202 -~d~~~l~~l~~G~~G~is~~a 222 (318)
T 3qfe_A 202 -QSDFLIGGLSVGSAGCIAAFA 222 (318)
T ss_dssp -CGGGHHHHHHTTCCEEECGGG
T ss_pred -cHHHHHHHHHCCCCEEEecHH
Confidence 234567889999999988874
No 377
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=88.30 E-value=2.6 Score=40.16 Aligned_cols=122 Identities=16% Similarity=0.118 Sum_probs=82.1
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++=+.+++.. +.|+.
T Consensus 138 ~~~~~~~~~~a~~~~~~G~~~~K~K~G~~~----~~d~~----------------------------------------- 172 (356)
T 3ro6_B 138 IKPVEETLAEAREHLALGFRVLKVKLCGDE----EQDFE----------------------------------------- 172 (356)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCSCH----HHHHH-----------------------------------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeCCCH----HHHHH-----------------------------------------
Confidence 357777777777788899999877665311 00000
Q ss_pred ccHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 212 LSWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 212 ~~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.+ ++++.+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||+++
T Consensus 173 -~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~d 241 (356)
T 3ro6_B 173 -RLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELGIEFIEQ--------PFPAGRTDWLRALPKAI--RRRIAAD 241 (356)
T ss_dssp -HHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTTCCCEEC--------CSCTTCHHHHHTSCHHH--HHTEEES
T ss_pred -HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCCCcHHHHHHHHhcC--CCCEEeC
Confidence 122666665 467877653 34444 45677788877741 11123567777776665 6999999
Q ss_pred cCCCCHHHHHHHHHcC--CCEEEechHH
Q 017718 284 GGVRRGTDVFKALALG--ASGIFIGRPV 309 (367)
Q Consensus 284 GGI~~~~dv~kal~lG--Ad~V~ig~~~ 309 (367)
+-+.+..|+.+++..| +|.|++--..
T Consensus 242 E~~~~~~~~~~~~~~~~~~d~v~~k~~~ 269 (356)
T 3ro6_B 242 ESLLGPADAFALAAPPAACGIFNIKLMK 269 (356)
T ss_dssp TTCCSHHHHHHHHSSSCSCSEEEECHHH
T ss_pred CcCCCHHHHHHHHhcCCcCCEEEEcccc
Confidence 9999999999999976 8999987543
No 378
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=88.22 E-value=5.2 Score=38.67 Aligned_cols=81 Identities=12% Similarity=-0.010 Sum_probs=59.5
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.. +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.
T Consensus 210 avR~a~G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~ 279 (410)
T 2gl5_A 210 AMREAMGDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEE--------PIHPLNSDNMQKVSRST--TIPIATGERSY 279 (410)
T ss_dssp HHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------SSCSSCHHHHHHHHHHC--SSCEEECTTCC
T ss_pred HHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEecCCcC
Confidence 677766 588888753 35555 44566677765531 11234677888888876 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEec
Q 017718 288 RGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig 306 (367)
+..++.+++..| +|.|++-
T Consensus 280 ~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 280 TRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp TTHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCCEEecC
Confidence 999999999987 7999874
No 379
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=88.22 E-value=3.7 Score=38.26 Aligned_cols=84 Identities=25% Similarity=0.200 Sum_probs=56.5
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-C--C-CCCCccchHHH-HHHHHHHhc-CCCcEEEec--CCCCHHHHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A--R-QLDYVPATIMA-LEEVVKATQ-GRIPVFLDG--GVRRGTDVF 293 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g--~-~~~~~~~~~~~-l~~i~~~~~-~~~~via~G--GI~~~~dv~ 293 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++- +..++...+ .++||++|. |..++.++.
T Consensus 14 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~ 93 (290)
T 2hjp_A 14 GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNVH 93 (290)
T ss_dssp CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHHH
Confidence 56898888899999999999999999998521 1 1 13444444443 333322222 279999976 444666554
Q ss_pred ----HHHHcCCCEEEe
Q 017718 294 ----KALALGASGIFI 305 (367)
Q Consensus 294 ----kal~lGAd~V~i 305 (367)
+.+..||++|.|
T Consensus 94 ~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVM 109 (290)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCeEEEE
Confidence 455689999987
No 380
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=88.19 E-value=14 Score=33.15 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=44.0
Q ss_pred HHHhhcCCCEEEEecCCHH---HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 216 WLQTITKLPILVKGVLTAE---DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~---~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+|+.+++||++-...++. ..+.+.++|+|++++.... . ....+.+..+.+ . .++++.---..+..+.
T Consensus 88 ~ir~~~~~Pv~~m~~~~~~~~~~~~~a~~aGadgv~v~d~~---~---~~~~~~~~~~~~-~--g~~~i~~~a~~t~~e~ 158 (262)
T 1rd5_A 88 EVTPELSCPVVLLSYYKPIMFRSLAKMKEAGVHGLIVPDLP---Y---VAAHSLWSEAKN-N--NLELVLLTTPAIPEDR 158 (262)
T ss_dssp HHGGGCSSCEEEECCSHHHHSCCTHHHHHTTCCEEECTTCB---T---TTHHHHHHHHHH-T--TCEECEEECTTSCHHH
T ss_pred HHHhcCCCCEEEEecCcHHHHHHHHHHHHcCCCEEEEcCCC---h---hhHHHHHHHHHH-c--CCceEEEECCCCCHHH
Confidence 7787788999885433332 1334899999999984311 0 012233333322 2 3333332234454444
Q ss_pred HHH-HHcCCCEEEech
Q 017718 293 FKA-LALGASGIFIGR 307 (367)
Q Consensus 293 ~ka-l~lGAd~V~ig~ 307 (367)
++. ...+.+++.+++
T Consensus 159 ~~~~~~~~~g~v~~~s 174 (262)
T 1rd5_A 159 MKEITKASEGFVYLVS 174 (262)
T ss_dssp HHHHHHHCCSCEEEEC
T ss_pred HHHHHhcCCCeEEEec
Confidence 444 456666666654
No 381
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=87.95 E-value=2.1 Score=41.07 Aligned_cols=107 Identities=20% Similarity=0.057 Sum_probs=59.5
Q ss_pred CCCceEEEEeecCCHHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhHHhhh-hcCCCCccccccccccccCccccccch
Q 017718 121 GPGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKN-RFTLPPFLTLKNFQGLDLGKMDEANDS 198 (367)
Q Consensus 121 ~~~~~~~QLy~~~d~~~~~~~l~ra~~~G-~~ai~itvd~p~~g~r~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~ 198 (367)
...|.++.|-+.-|.+.+.++++.++++| +++|.++ ++-..|-.. |+.. ...+.+ ++. .+.-+
T Consensus 192 ~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~-NT~~~g~~i-di~~~~~~~~~----~~~---------~gGlS 256 (354)
T 4ef8_A 192 YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCI-NSIGNGLVI-DAETESVVIKP----KQG---------FGGLG 256 (354)
T ss_dssp CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEEC-CCEEEEECE-ETTTTEESCSG----GGG---------EEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEe-cccCcceee-eccCCcccccc----ccc---------cCCCC
Confidence 34688999877667777777888888898 9988752 110000000 0000 000000 000 00000
Q ss_pred hhHHHhhhccCccccHH---HHHhhc-CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 199 GLAAYVAGQIDRSLSWK---WLQTIT-KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 199 ~~~~~~~~~~d~~~~~~---~l~~~~-~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
+. .-...+|+ .+++.. ++||+.=+ +.+.+|+..+..+|||+|.+
T Consensus 257 G~-------~i~p~a~~~i~~v~~~~~~ipII~~GGI~s~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 257 GR-------YVLPTALANINAFYRRCPGKLIFGCGGVYTGEDAFLHVLAGASMVQV 305 (354)
T ss_dssp GG-------GGHHHHHHHHHHHHHHCTTSEEEEESCCCSHHHHHHHHHHTEEEEEE
T ss_pred CC-------CCchHHHHHHHHHHHhCCCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 00 01123454 566665 68987654 58899999999999999988
No 382
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=87.90 E-value=6 Score=38.08 Aligned_cols=82 Identities=12% Similarity=0.063 Sum_probs=58.5
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ ++++.+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||.++..+.
T Consensus 205 avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 274 (383)
T 3toy_A 205 GLRALLGPDIALMLDFNQSLDPAEATRRIARLADYDLTWIEE--------PVPQENLSGHAAVRERS--EIPIQAGENWW 274 (383)
T ss_dssp HHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCC
T ss_pred HHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcchHHHHHHHHhhc--CCCEEeCCCcC
Confidence 667765 467777643 34555 45566677776641 11223567788888776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 275 ~~~~~~~~i~~~a~d~v~ik~ 295 (383)
T 3toy_A 275 FPRGFAEAIAAGASDFIMPDL 295 (383)
T ss_dssp HHHHHHHHHHHTCCSEECCCT
T ss_pred CHHHHHHHHHcCCCCEEEeCc
Confidence 999999999987 78888753
No 383
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=87.87 E-value=2.2 Score=40.12 Aligned_cols=76 Identities=21% Similarity=0.203 Sum_probs=54.5
Q ss_pred HHHhhcCCCEEEEecCC--------HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTITKLPILVKGVLT--------AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~--------~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+++.++.|+.+-...+ .+.++.+.++|+|+|.++ +|. + .+.+..+++. .++++.+ +.
T Consensus 61 ~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~--~g~------p-~~~~~~l~~~---gi~vi~~--v~ 126 (328)
T 2gjl_A 61 RCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETA--GND------P-GEHIAEFRRH---GVKVIHK--CT 126 (328)
T ss_dssp HHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEE--ESC------C-HHHHHHHHHT---TCEEEEE--ES
T ss_pred HHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEc--CCC------c-HHHHHHHHHc---CCCEEee--CC
Confidence 56666667776655443 366889999999999884 331 1 3455555432 5788853 88
Q ss_pred CHHHHHHHHHcCCCEEEe
Q 017718 288 RGTDVFKALALGASGIFI 305 (367)
Q Consensus 288 ~~~dv~kal~lGAd~V~i 305 (367)
+.+++.++...|||++.+
T Consensus 127 t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 127 AVRHALKAERLGVDAVSI 144 (328)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 999999999999999998
No 384
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=87.83 E-value=5.6 Score=37.69 Aligned_cols=87 Identities=11% Similarity=0.158 Sum_probs=58.8
Q ss_pred CCceEEEEeec------CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccc
Q 017718 122 PGIRFFQLYVY------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEA 195 (367)
Q Consensus 122 ~~~~~~QLy~~------~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 195 (367)
.-+.++.|-.. .+.+...+++++++++|++.|.++...... . ..+
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~-~---------~~~------------------- 259 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVP-A---------RMN------------------- 259 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSC-C---------CCC-------------------
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccC-C---------CCC-------------------
Confidence 34677777532 235667789999999999998886532110 0 000
Q ss_pred cchhhHHHhhhccCccccH---HHHHhhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEE
Q 017718 196 NDSGLAAYVAGQIDRSLSW---KWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 196 ~~~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G-~d~i~v 249 (367)
..+...| +.+|+.+++||+.-+. .++++|+.+.+.| +|.|.+
T Consensus 260 ------------~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 260 ------------VYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp ------------CCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ------------CCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEe
Confidence 0011122 2788888999988775 5899999999999 999988
No 385
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.81 E-value=17 Score=33.66 Aligned_cols=181 Identities=15% Similarity=0.117 Sum_probs=100.6
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCcee--ecC---CCCCCHHHHH-------hh-CC-CceEEEEeecCCHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMT--LSS---WSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNVV 138 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~--vs~---~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~~ 138 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+... .|| ..+.+.||-. +. .. -|.+...- ..+-...
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 445667643222333333466666677887543 333 3456666522 22 22 35666653 3456667
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHHH
Q 017718 139 AQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQ 218 (367)
Q Consensus 139 ~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 218 (367)
.++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+.
T Consensus 96 i~la~~A~~~Gadavlv~--~P~y-----------------~~~s-------------~~~l~~----------~f~~va 133 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAV--TPFY-----------------YPFS-------------FEEHCD----------HYRAII 133 (303)
T ss_dssp HHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHHH
T ss_pred HHHHHHHHhCCCCEEEec--CCCC-----------------CCCC-------------HHHHHH----------HHHHHH
Confidence 788999999999999874 2331 0000 001111 224666
Q ss_pred hhcC-CCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 219 TITK-LPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 219 ~~~~-~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
+.++ +||++=.+ .+++...++.+.. +-+|.-+ . ..+..+.++.+. ..++.|+. |. .
T Consensus 134 ~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s--~--------gd~~~~~~~~~~-~~~f~v~~-G~---d 198 (303)
T 2wkj_A 134 DSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALXQT--S--------GDLYQMEQIRRE-HPDLVLYN-GY---D 198 (303)
T ss_dssp HHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEEC--C--------CCHHHHHHHHHH-CTTCEEEE-CC---G
T ss_pred HhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEeCC--C--------CCHHHHHHHHHh-CCCeEEEe-Cc---H
Confidence 7778 99998764 5678777776542 2222221 1 123344455444 33555543 42 3
Q ss_pred HHHHHHHHcCCCEEEechHHHH
Q 017718 290 TDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.-++.++.+||+++.-+..-++
T Consensus 199 ~~~~~~l~~G~~G~is~~an~~ 220 (303)
T 2wkj_A 199 NIFASGLLAGADGGIGSTYNIM 220 (303)
T ss_dssp GGHHHHHHHTCCEEEETTHHHH
T ss_pred HHHHHHHHCCCCEEEeCHHHhC
Confidence 4478889999999999976544
No 386
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=87.77 E-value=7.5 Score=37.51 Aligned_cols=84 Identities=13% Similarity=0.088 Sum_probs=59.3
Q ss_pred HHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ ++++.+..- .+.++| +.+.+.|++.|-= ...+..++.+.++++.. .+||.++..+.
T Consensus 211 avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 280 (390)
T 3ugv_A 211 AVWDAVGRDTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEE--------PVVYDNFDGYAQLRHDL--KTPLMIGENFY 280 (390)
T ss_dssp HHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEEC--------CSCTTCHHHHHHHHHHC--SSCEEECTTCC
T ss_pred HHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCcccHHHHHHHHHhc--CCCEEeCCCcC
Confidence 667765 467877653 345554 4555667766631 11223577788888776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEechHH
Q 017718 288 RGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+..|+.+++..| +|.|++--..
T Consensus 281 ~~~~~~~~i~~~a~d~v~ik~~~ 303 (390)
T 3ugv_A 281 GPREMHQALQAGACDLVMPDFMR 303 (390)
T ss_dssp SHHHHHHHHHTTCCSEECCBHHH
T ss_pred CHHHHHHHHHcCCCCEEEeCccc
Confidence 999999999987 7888876533
No 387
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=87.69 E-value=2.8 Score=38.96 Aligned_cols=85 Identities=21% Similarity=0.287 Sum_probs=57.8
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-C-C---CCCCccchHHH-HHHHHHHhc-CCCcEEEec--CCCCHHHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIMA-LEEVVKATQ-GRIPVFLDG--GVRRGTDV 292 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g-~---~~~~~~~~~~~-l~~i~~~~~-~~~~via~G--GI~~~~dv 292 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++- +..+++..+ .++||++|. |..+++++
T Consensus 20 ~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg~~~~~ 99 (287)
T 3b8i_A 20 SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYGNALNV 99 (287)
T ss_dssp SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSSSHHHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHH
Confidence 56888888889999999999999999998642 1 0 23445545443 333332222 278999976 45577666
Q ss_pred H----HHHHcCCCEEEec
Q 017718 293 F----KALALGASGIFIG 306 (367)
Q Consensus 293 ~----kal~lGAd~V~ig 306 (367)
. +.+..||++|.|=
T Consensus 100 ~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 100 MRTVVELERAGIAALTIE 117 (287)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCeEEEEc
Confidence 5 4556899999873
No 388
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=87.66 E-value=3.6 Score=36.46 Aligned_cols=83 Identities=11% Similarity=-0.000 Sum_probs=52.3
Q ss_pred HHHhhcCCCEEEEec-CC-HHHHHHHHHcCCcEEEEcCCCCCCCCCccch-HHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 216 WLQTITKLPILVKGV-LT-AEDARIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-~~-~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+|+.++.|+.+-.. .+ .+.++.+.++|+|+|.+ |++.. ... .+.+.++++. .+.++.+=.-.++.+.
T Consensus 58 ~lr~~~~~~~~v~lmv~d~~~~i~~~~~agad~v~v--H~~~~----~~~~~~~~~~i~~~---g~~igv~~~p~t~~e~ 128 (228)
T 1h1y_A 58 SLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTF--HIEVS----RDNWQELIQSIKAK---GMRPGVSLRPGTPVEE 128 (228)
T ss_dssp HHHTTCCSEEEEEEESSCGGGGHHHHHHHTCSEEEE--EGGGC----TTTHHHHHHHHHHT---TCEEEEEECTTSCGGG
T ss_pred HHHhhcCCcEEEEEEecCHHHHHHHHHHcCCCEEEE--CCCCc----ccHHHHHHHHHHHc---CCCEEEEEeCCCCHHH
Confidence 667666666664332 33 23478888899999999 55421 123 3445555432 4555555455677677
Q ss_pred HHHHHc---CCCEEEech
Q 017718 293 FKALAL---GASGIFIGR 307 (367)
Q Consensus 293 ~kal~l---GAd~V~ig~ 307 (367)
++.+.- ++|.|.+++
T Consensus 129 ~~~~~~~~~~~d~vl~~s 146 (228)
T 1h1y_A 129 VFPLVEAENPVELVLVMT 146 (228)
T ss_dssp GHHHHHSSSCCSEEEEES
T ss_pred HHHHHhcCCCCCEEEEEe
Confidence 777766 999999976
No 389
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=87.62 E-value=4.3 Score=39.80 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc-
Q 017718 134 DRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL- 212 (367)
Q Consensus 134 d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~- 212 (367)
+++.+.+.++++.+.||+++=++++... + .+.
T Consensus 198 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~---~--------------------------------------------~d~e 230 (441)
T 2hxt_A 198 SDEKLVRLAKEAVADGFRTIKLKVGANV---Q--------------------------------------------DDIR 230 (441)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH---H--------------------------------------------HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCH---H--------------------------------------------HHHH
Confidence 6777778888888999999987665210 0 000
Q ss_pred cHHHHHhhc--CCCEEEEec--CCHHHHH----HHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec
Q 017718 213 SWKWLQTIT--KLPILVKGV--LTAEDAR----IAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG 284 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~~~~a~----~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G 284 (367)
..+.+|+.+ +++|.+..- .+.+++. .+.+.|++.|-- ...+..++.+.++++.+. .+||++++
T Consensus 231 ~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~~-~iPIa~dE 301 (441)
T 2hxt_A 231 RCRLARAAIGPDIAMAVDANQRWDVGPAIDWMRQLAEFDIAWIEE--------PTSPDDVLGHAAIRQGIT-PVPVSTGE 301 (441)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHTTGGGCCSCEEC--------CSCTTCHHHHHHHHHHHT-TSCEEECT
T ss_pred HHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeC--------CCCHHHHHHHHHHHhhCC-CCCEEEeC
Confidence 122566655 467776643 3555543 345566665531 111235677788877652 59999999
Q ss_pred CCCCHHHHHHHHHcC-CCEEEec
Q 017718 285 GVRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 285 GI~~~~dv~kal~lG-Ad~V~ig 306 (367)
.+.+..++.+.+..| +|.|++-
T Consensus 302 ~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 302 HTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp TCCSHHHHHHHHHHTCCSEECCC
T ss_pred CcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999987 7999884
No 390
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=87.54 E-value=4.6 Score=39.37 Aligned_cols=152 Identities=13% Similarity=-0.016 Sum_probs=87.0
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.||+++=+.+++|..... ++..-. +... .......... ........ .+.+
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~-----~g~~~~-~~~~---~~~~~~~p~~-~~~~~~~~----~~~d 206 (418)
T 3r4e_A 141 GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDA-----YGVGRG-KLYY---EPADASLPSV-TGWDTRKA----LNYV 206 (418)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC---------------------------CCCCE-EEECHHHH----HHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcccccc-----cccccc-cccc---cccccccccc-ccccchhH----HHHH
Confidence 4678888888888888999999998887531000 000000 0000 0000000000 00000000 0111
Q ss_pred cc-HHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 LS-WKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~~-~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+. .+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ .+||++
T Consensus 207 ~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 276 (418)
T 3r4e_A 207 PKLFEELRKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLED--------CTPAENQEAFRLVRQHT--VTPLAV 276 (418)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEES--------CSCCSSGGGGHHHHHHC--CSCEEE
T ss_pred HHHHHHHHHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEEC--------CCCccCHHHHHHHHhcC--CCCEEE
Confidence 11 23788876 578888754 35555 45667788887742 01122455677777766 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 277 dE~~~~~~~~~~~l~~~a~d~v~~k~ 302 (418)
T 3r4e_A 277 GEIFNTIWDAKDLIQNQLIDYIRATV 302 (418)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCT
T ss_pred cCCcCCHHHHHHHHHcCCCCeEecCc
Confidence 99999999999999987 89998864
No 391
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.34 E-value=2.6 Score=39.84 Aligned_cols=68 Identities=25% Similarity=0.237 Sum_probs=49.4
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~---GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+.++...++|||.|.+- ++++.+.+.++.+.+ ++|+.++ +|-...-++.+.-.+|.+.|.++...+
T Consensus 193 ~Ra~Ay~eAGAd~i~~e---------~~~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ 261 (318)
T 1zlp_A 193 RRANLYKEAGADATFVE---------APANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKEMGFHLIAHSLTAV 261 (318)
T ss_dssp HHHHHHHHTTCSEEEEC---------CCCSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHHHTCCEEEECSHHH
T ss_pred HHHHHHHHcCCCEEEEc---------CCCCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 45788999999999982 245677888888888 6998653 432222334556679999999998777
Q ss_pred HH
Q 017718 311 YS 312 (367)
Q Consensus 311 ~~ 312 (367)
.+
T Consensus 262 ra 263 (318)
T 1zlp_A 262 YA 263 (318)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 392
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=87.28 E-value=3.3 Score=38.78 Aligned_cols=32 Identities=38% Similarity=0.730 Sum_probs=26.3
Q ss_pred HHHhhcCCCEEEEec-CCHHHHHHHHH-cCCcEEEE
Q 017718 216 WLQTITKLPILVKGV-LTAEDARIAVQ-AGAAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-~~~~~a~~~~~-~G~d~i~v 249 (367)
.+++ ++||+.-+- .+.+++..+.+ .|+|+|.+
T Consensus 179 ~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~i 212 (318)
T 1vhn_A 179 VLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLV 212 (318)
T ss_dssp GSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEE
T ss_pred HHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEE
Confidence 4444 899988765 68999999888 79999988
No 393
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=87.27 E-value=6.2 Score=38.11 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=60.0
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.. +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.
T Consensus 207 avR~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~~ 276 (407)
T 2o56_A 207 AIRDAVGPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYEE--------PVMPLNPAQMKQVADKV--NIPLAAGERIY 276 (407)
T ss_dssp HHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCSSSHHHHHHHHHHC--CSCEEECTTCC
T ss_pred HHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEEeCCCcC
Confidence 677766 578888753 35555 45566778776541 11234677888888877 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEec
Q 017718 288 RGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig 306 (367)
+..++.+++..| +|.|++-
T Consensus 277 ~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 277 WRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp HHHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHcCCCCEEecC
Confidence 999999999987 8999883
No 394
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=87.19 E-value=8.1 Score=36.80 Aligned_cols=85 Identities=18% Similarity=0.175 Sum_probs=58.6
Q ss_pred HHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +.++.+..- .+.++| +.+.+.|++.|- + ...+..++.+.++++.. .+||++++.+.
T Consensus 177 avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 246 (367)
T 3dg3_A 177 ALRERFGDAIELYVDGNRGWSAAESLRAMREMADLDLLFAE-------E-LCPADDVLSRRRLVGQL--DMPFIADESVP 246 (367)
T ss_dssp HHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE-------S-CSCTTSHHHHHHHHHHC--SSCEEECTTCS
T ss_pred HHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCcccHHHHHHHHHhC--CCCEEecCCcC
Confidence 666665 467777643 355554 344555666553 1 11123567778887766 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEechHHH
Q 017718 288 RGTDVFKALALG-ASGIFIGRPVV 310 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~~~l 310 (367)
+..|+.+++..| +|.|++--..+
T Consensus 247 ~~~~~~~~i~~~~~d~v~~k~~~~ 270 (367)
T 3dg3_A 247 TPADVTREVLGGSATAISIKTART 270 (367)
T ss_dssp SHHHHHHHHHHTSCSEEEECHHHH
T ss_pred CHHHHHHHHHcCCCCEEEeehhhh
Confidence 999999999987 89999965443
No 395
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.13 E-value=5.6 Score=37.48 Aligned_cols=83 Identities=25% Similarity=0.340 Sum_probs=57.9
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-C-C---CCCCccchHH----HHHHHHHHhcCCCcEEEec--CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R---QLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g-~---~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~~~~ 290 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++ .+..|.+.++ ++||++|. |..++.
T Consensus 38 ~~~i~~~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~d~Gyg~~~ 116 (318)
T 1zlp_A 38 HGSVLMPGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDGDTGGGGPL 116 (318)
T ss_dssp SSSEEEEEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEECTTCSSSHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeCCCCCCCHH
Confidence 56898888899999999999999999998631 1 0 1344544443 3344444442 69999976 444666
Q ss_pred HHH----HHHHcCCCEEEe
Q 017718 291 DVF----KALALGASGIFI 305 (367)
Q Consensus 291 dv~----kal~lGAd~V~i 305 (367)
++. +.+..||.+|.|
T Consensus 117 ~v~~tv~~l~~aGaagv~i 135 (318)
T 1zlp_A 117 NVQRFIRELISAGAKGVFL 135 (318)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCcEEEE
Confidence 554 455689999987
No 396
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=87.13 E-value=4.8 Score=38.58 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=30.9
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G-~d~i~v 249 (367)
.+|+.+++||+.-+..+.++++.+++.| +|+|.+
T Consensus 288 ~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 288 KVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 7888899999988877999999999998 999988
No 397
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=87.11 E-value=5.4 Score=38.59 Aligned_cols=143 Identities=16% Similarity=0.017 Sum_probs=85.0
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.||+++=+.++.+... .+.. .-|.+.. ....-...+.+ +.+
T Consensus 131 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~---~~~~---~~~~~~~-------------~g~~~~~~~~~----~~d 187 (401)
T 3sbf_A 131 SDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGV---PTDL---HTTQNPT-------------EGSYYDQDQYM----DNT 187 (401)
T ss_dssp ESSHHHHHHHHHHHHHTTCCEEEEEESCCCSC---GGGS---CCCSSCC-------------SSEECCHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---cccc---ccccccc-------------ccccccchHHH----HHH
Confidence 46788888888888889999998888753210 0000 0000000 00000000000 011
Q ss_pred cc-HHHHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 LS-WKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~~-~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+. .+.+|+.+ +++|.+..- .+.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||++
T Consensus 188 ~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~ 257 (401)
T 3sbf_A 188 LTMFKSLREKYGNQFHILHDVHERLFPNQAIQFAKEVEQYKPYFIED--------ILPPNQTEWLDNIRSQS--SVSLGL 257 (401)
T ss_dssp HHHHHHHHHHHTTSSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEEC--------SSCTTCGGGHHHHHTTC--CCCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCEEe
Confidence 11 23778776 578888764 355554 5566778777642 01122455667776655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 258 dE~~~~~~~~~~~i~~~~~d~v~~k~ 283 (401)
T 3sbf_A 258 GELFNNPEEWKSLIANRRIDFIRCHV 283 (401)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEECCCG
T ss_pred CCccCCHHHHHHHHhcCCCCEEecCc
Confidence 99999999999999987 79998864
No 398
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.08 E-value=2.2 Score=39.84 Aligned_cols=82 Identities=26% Similarity=0.432 Sum_probs=57.6
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-CC----CCCCccchHH----HHHHHHHHhcCCCcEEEec--CCC-CH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR----QLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVR-RG 289 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g~----~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~-~~ 289 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ +. ..|.++-+++ .+..|.+.+ ++||++|. |.. ++
T Consensus 16 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~Gyg~~~ 93 (295)
T 1xg4_A 16 ENPLQIVGTINANHALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC--SLPLLVDADIGFGSSA 93 (295)
T ss_dssp SSSEEEEECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC--CSCEEEECTTCSSSSH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC--CCCEEecCCcccCCCH
Confidence 56898888899999999999999999998642 11 1344444443 344455544 68999987 544 56
Q ss_pred HHHH----HHHHcCCCEEEe
Q 017718 290 TDVF----KALALGASGIFI 305 (367)
Q Consensus 290 ~dv~----kal~lGAd~V~i 305 (367)
.++. +.+..||++|.|
T Consensus 94 ~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 94 FNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEE
Confidence 6554 355689999987
No 399
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=87.05 E-value=18 Score=33.23 Aligned_cols=175 Identities=15% Similarity=0.116 Sum_probs=95.5
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hhCCCceEEEEeecCCHHHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~~~~~~~~QLy~~~d~~~~~~ 140 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +...+ .+...- ..+-+...+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~ 82 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIR 82 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHH
Confidence 4456666432223333334566666678876433 33 3456666532 22223 444443 345666778
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcccc-ccccccccCccccccchhhHHHhhhccCccccHHHHHh
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL-KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT 219 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 219 (367)
+.+.|+++|++++.+. .|.. .. .+ ..++.+ .++.+.+
T Consensus 83 la~~A~~~Gadavlv~--~P~y-----------------~~~~s-------------~~~l~~----------~f~~va~ 120 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASY--APYY-----------------YPRMS-------------EKHLVK----------YFKTLCE 120 (293)
T ss_dssp HHHHGGGSCCSEEEEE--CCCS-----------------CSSCC-------------HHHHHH----------HHHHHHH
T ss_pred HHHHHHhcCCCEEEEc--CCCC-----------------CCCCC-------------HHHHHH----------HHHHHHh
Confidence 8899999999999874 2331 00 00 001111 2236667
Q ss_pred hcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 220 ITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 220 ~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+++||++=.+ .+++...+ --.+-+|--+. ..+..+.++.+ .++++.|+ +|- ..-+
T Consensus 121 a~~lPiilYn~P~~tg~~l~~~~~~~--~pnIvgiKds~----------gd~~~~~~~~~-~~~~f~v~-~G~---d~~~ 183 (293)
T 1w3i_A 121 VSPHPVYLYNYPTATGKDIDAKVAKE--IGCFTGVKDTI----------ENIIHTLDYKR-LNPNMLVY-SGS---DMLI 183 (293)
T ss_dssp HCSSCEEEEECHHHHSCCCCHHHHHH--HCCEEEEEECC----------SCHHHHHHHHH-HCTTSEEE-ECC---STTH
T ss_pred hCCCCEEEEECchhhCcCCCHHHHHh--cCCEEEEEeCC----------CCHHHHHHHHh-cCCCEEEE-Ecc---HHHH
Confidence 78999998775 45666555 12222332211 12444455555 55566654 452 2346
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
+.++.+||+++.-+..
T Consensus 184 ~~~l~~G~~G~is~~a 199 (293)
T 1w3i_A 184 ATVASTGLDGNVAAGS 199 (293)
T ss_dssp HHHHHTTCCEEECGGG
T ss_pred HHHHHcCCCEEEeCHH
Confidence 7788999999998874
No 400
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=87.02 E-value=6.4 Score=35.54 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCcEEEEc-CCCCCCCCCc-cchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHH----HHcCCCEEEec
Q 017718 234 EDARIAVQAGAAGIIVS-NHGARQLDYV-PATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKA----LALGASGIFIG 306 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs-~~gg~~~~~~-~~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv~ka----l~lGAd~V~ig 306 (367)
.+++.+.+.|||.|.+. |-|. -.++. ..-.+-|.++++.+++ -++||..-|.-+.+.+.++ ..+|||+|=-.
T Consensus 99 ~Ea~~Ai~~GAdEIDmViNig~-lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 99 YETKVAVEQGAEEVDMVINIGM-VKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH-HHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHHcCCCEEEEEeehHH-hccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECC
Confidence 56888999999999974 3221 11111 1133446666666643 3788888888898999888 67899999988
Q ss_pred hHH
Q 017718 307 RPV 309 (367)
Q Consensus 307 ~~~ 309 (367)
+-|
T Consensus 178 TGf 180 (239)
T 3ngj_A 178 TGF 180 (239)
T ss_dssp CSS
T ss_pred CCC
Confidence 755
No 401
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=86.81 E-value=8 Score=33.75 Aligned_cols=35 Identities=31% Similarity=0.435 Sum_probs=29.9
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEc
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs 250 (367)
++++..++||++-+..+.+++..+.++|+|++.++
T Consensus 158 ~~~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 158 DIKQRISIPVIAIGGMTPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp HHHHHCCSCEEEESSCCGGGHHHHHHTTCSEEEES
T ss_pred HHHHhCCCCEEEECCCCHHHHHHHHHcCCCEEEEh
Confidence 55555689999988779999999999999999984
No 402
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=86.75 E-value=0.54 Score=41.28 Aligned_cols=38 Identities=21% Similarity=0.417 Sum_probs=33.7
Q ss_pred HHHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEcCC
Q 017718 215 KWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVSNH 252 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs~~ 252 (367)
+++++.+++||++.|- .+.|++..+.++||++|+.|+.
T Consensus 143 ~~i~~~~~~PiIaGGlI~~~edv~~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 143 QKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHHHHHCCCEEEESSCCSHHHHHHHHTTTEEEEEECCG
T ss_pred HHHHHhcCCCEEEECCcCCHHHHHHHHHcCCeEEEeCCH
Confidence 4788889999999885 7899999999999999999873
No 403
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=86.66 E-value=1.4 Score=41.29 Aligned_cols=86 Identities=26% Similarity=0.322 Sum_probs=53.4
Q ss_pred hcCCCEEEEecC--CHHH----HHHHHHcCCcEEEEcCCCCCCCCCc--cchHHHHHHHHHHhcCCCcEEEe--------
Q 017718 220 ITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVFLD-------- 283 (367)
Q Consensus 220 ~~~~Pv~vK~v~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~~~via~-------- 283 (367)
.+++||++|..+ ++++ ++.+.+.|-+-|++--.|- ..... ...+..++.+++ . .+||+.|
T Consensus 153 ~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~-~y~~~~~~vdl~~i~~lk~-~--~~PV~~D~sHsvq~p 228 (298)
T 3fs2_A 153 RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGV-SFGYNTLVSDMRALPIMAG-L--GAPVIFDATHSVQQP 228 (298)
T ss_dssp HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCE-ECSSSCEECCTTHHHHHHT-T--TSCEEEEHHHHTCCC
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCC-CCCCCCCccCHHHHHHHHH-c--CCcEEEcCCCccccC
Confidence 468999999985 4433 5666778887777753332 21111 124556776665 5 7999995
Q ss_pred -------cCCCCH--HHHHHHHHcCCCEEEechHH
Q 017718 284 -------GGVRRG--TDVFKALALGASGIFIGRPV 309 (367)
Q Consensus 284 -------GGI~~~--~dv~kal~lGAd~V~ig~~~ 309 (367)
||-+.- .-...|.++|||+++|=+-+
T Consensus 229 ~~~~~~s~G~r~~v~~~a~AAvAlGAdGl~IE~H~ 263 (298)
T 3fs2_A 229 GGQGGSTGGQREFVETLARAAVAVGVAGFFIETHE 263 (298)
T ss_dssp C--------CGGGHHHHHHHHHHHCCSEEEEEEES
T ss_pred CcccCCCCCchhhHHHHHHHHHHcCCCEEEEEecC
Confidence 333222 22447888999999997643
No 404
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=86.52 E-value=1.2 Score=44.75 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=50.5
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.+.++.+.++|++.+.+....|.. ...++.+..+++..++++||++ |+|.+.+++.++..+|||++.+|.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~----~~~~~~i~~lk~~~~~~~~Vi~-G~V~t~~~a~~l~~aGad~I~Vg~ 313 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFS----EWQKITIGWIREKYGDKVKVGA-GNIVDGEGFRYLADAGADFIKIGI 313 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCS----HHHHHHHHHHHHHHGGGSCEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhhhccceEEecccCcc----cchhhHHHHHHHhCCCCceEee-ccccCHHHHHHHHHhCCCeEEecc
Confidence 455788889999999884322211 2245566666665532277774 899999999999999999998764
No 405
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=86.45 E-value=5.2 Score=38.61 Aligned_cols=82 Identities=13% Similarity=-0.012 Sum_probs=59.2
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.. +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.
T Consensus 201 avr~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 270 (403)
T 2ox4_A 201 AIRNAVGPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFFYEE--------INTPLNPRLLKEAKKKI--DIPLASGERIY 270 (403)
T ss_dssp HHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEEEEC--------CSCTTSTHHHHHHHHTC--CSCEEECTTCC
T ss_pred HHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEeC--------CCChhhHHHHHHHHHhC--CCCEEecCCcC
Confidence 677766 588888753 35555 44566677665531 11223567778887766 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..++.+++..| +|.|++--
T Consensus 271 ~~~~~~~~i~~~~~d~v~ik~ 291 (403)
T 2ox4_A 271 SRWGFLPFLEDRSIDVIQPDL 291 (403)
T ss_dssp HHHHHHHHHHTTCCSEECCCH
T ss_pred CHHHHHHHHHcCCCCEEecCc
Confidence 999999999987 89998854
No 406
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=86.36 E-value=0.94 Score=41.83 Aligned_cols=34 Identities=29% Similarity=0.329 Sum_probs=29.1
Q ss_pred HHHHhhcCCCEEEEecC-CHHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQTITKLPILVKGVL-TAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v~-~~~~a~~~~~~G~d~i~vs 250 (367)
+.+|+.+++||++-+.. ++++++.+ .|+|+++|.
T Consensus 195 ~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 195 RRIKARTALPVAVGFGVSGKATAAQA--AVADGVVVG 229 (271)
T ss_dssp HHHHTTCCSCEEEESCCCSHHHHHHH--TTSSEEEEC
T ss_pred HHHHhhcCCCEEEEcCCCCHHHHHHh--cCCCEEEEC
Confidence 48888889999998865 59999997 999999994
No 407
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=86.33 E-value=5.8 Score=37.69 Aligned_cols=116 Identities=16% Similarity=0.175 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+.+.+.+.++++.+.||+++=+.++ | +. ++ +
T Consensus 140 ~~~~~~~~~a~~~~~~Gf~~vKik~~-~----~~-~~--------------------------------e---------- 171 (368)
T 1sjd_A 140 DTIPQLLDVVGGYLDEGYVRIKLKIE-P----GW-DV--------------------------------E---------- 171 (368)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECB-T----TB-SH--------------------------------H----------
T ss_pred CCHHHHHHHHHHHHHhCccEEEEecC-c----hh-HH--------------------------------H----------
Confidence 46777777888888899999877653 1 00 00 0
Q ss_pred cHHHHHhhc--CCCEEEEec--CC---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 213 SWKWLQTIT--KLPILVKGV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~vK~v--~~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
..+.+|+.+ ++++.+..- .+ .+-++.+.+.|++.|-= . ..+..++.+.++++.+ ++||++++.
T Consensus 172 ~v~avr~~~g~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE~-------P-~~~~~~~~~~~l~~~~--~ipIa~dE~ 241 (368)
T 1sjd_A 172 PVRAVRERFGDDVLLQVDANTAYTLGDAPQLARLDPFGLLLIEQ-------P-LEEEDVLGHAELARRI--QTPICLDES 241 (368)
T ss_dssp HHHHHHHHHCTTSEEEEECTTCCCGGGHHHHHTTGGGCCSEEEC-------C-SCTTCHHHHHHHHTTC--SSCEEESTT
T ss_pred HHHHHHHhcCCCceEEEeccCCCCHHHHHHHHHHHhcCCCeEeC-------C-CChhhHHHHHHHHHhC--CCCEEECCC
Confidence 012444444 355554422 12 33445556677776531 0 1123567777776655 799999999
Q ss_pred CCCHHHHHHHHHcC-CCEEEec
Q 017718 286 VRRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 286 I~~~~dv~kal~lG-Ad~V~ig 306 (367)
+.+..++.+++..| +|.|++=
T Consensus 242 ~~~~~~~~~~i~~~~~d~v~ik 263 (368)
T 1sjd_A 242 IVSARAAADAIKLGAVQIVNIK 263 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEEC
T ss_pred cCCHHHHHHHHHcCCCCEEEec
Confidence 99999999999987 7999983
No 408
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.32 E-value=2.1 Score=39.72 Aligned_cols=84 Identities=19% Similarity=0.286 Sum_probs=47.7
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccch---HHHHHHHHHHhcCCCcEEE-ecCCCCHHHHHHHH----HcCCCEEEech
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPAT---IMALEEVVKATQGRIPVFL-DGGVRRGTDVFKAL----ALGASGIFIGR 307 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~---~~~l~~i~~~~~~~~~via-~GGI~~~~dv~kal----~lGAd~V~ig~ 307 (367)
++.+.+.|+|+|++.++.|-. ...+. .+++..+++.+.+ ||+ .|+..+ .++++.. .+|||++++-.
T Consensus 26 v~~li~~Gv~gl~~~GttGE~--~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t-~~ai~la~~A~~~Gadavlv~~ 99 (293)
T 1w3i_A 26 AENLIRKGIDKLFVNGTTGLG--PSLSPEEKLENLKAVYDVTNK---IIFQVGGLNL-DDAIRLAKLSKDFDIVGIASYA 99 (293)
T ss_dssp HHHHHHTTCCEEEESSTTTTG--GGSCHHHHHHHHHHHHTTCSC---EEEECCCSCH-HHHHHHHHHGGGSCCSEEEEEC
T ss_pred HHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHcCC---EEEecCCCCH-HHHHHHHHHHHhcCCCEEEEcC
Confidence 466788999999996654421 11222 2334444443433 554 454444 4444322 26999999999
Q ss_pred HHHHH-hhccChHHHHHHHHHH
Q 017718 308 PVVYS-LAAEGEKGVRRVLEML 328 (367)
Q Consensus 308 ~~l~~-l~~~G~~~v~~~i~~l 328 (367)
|+++. . .++++.++++.+
T Consensus 100 P~y~~~~---s~~~l~~~f~~v 118 (293)
T 1w3i_A 100 PYYYPRM---SEKHLVKYFKTL 118 (293)
T ss_dssp CCSCSSC---CHHHHHHHHHHH
T ss_pred CCCCCCC---CHHHHHHHHHHH
Confidence 98763 2 345555554444
No 409
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=86.31 E-value=4.6 Score=39.01 Aligned_cols=81 Identities=11% Similarity=0.025 Sum_probs=59.0
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccch-HHHHHHHHHHhcCCCcEEEecCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPAT-IMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~-~~~l~~i~~~~~~~~~via~GGI 286 (367)
.+|+.+ ++++.+..- -+.++ ++.+.+.|++.|-= ...+.. ++.+.++++.. .+||++++.+
T Consensus 191 avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~~l~~~~--~iPIa~dE~~ 260 (392)
T 3ddm_A 191 HVRELLGAATPLMADANQGWDLPRARQMAQRLGPAQLDWLEE--------PLRADRPAAEWAELAQAA--PMPLAGGENI 260 (392)
T ss_dssp HHHHHHCSSSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTSCHHHHHHHHHHC--SSCEEECTTC
T ss_pred HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEEC--------CCCccchHHHHHHHHHhc--CCCEEeCCCC
Confidence 677775 578888753 34555 45566778877641 111224 77788888776 7999999999
Q ss_pred CCHHHHHHHHHcC-CCEEEec
Q 017718 287 RRGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 287 ~~~~dv~kal~lG-Ad~V~ig 306 (367)
.+..|+.+++..| +|.|++-
T Consensus 261 ~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 261 AGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp CSHHHHHHHHHHTCEEEECCC
T ss_pred CCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999977 7888884
No 410
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=86.26 E-value=1.5 Score=42.31 Aligned_cols=82 Identities=13% Similarity=0.039 Sum_probs=53.7
Q ss_pred CCCEEEEec--CCHHHHHH-HHHcCCcEEEEcCCCCC---CC--CCccch-HHHHHHHHHHhcCCCcEEEecCC---CCH
Q 017718 222 KLPILVKGV--LTAEDARI-AVQAGAAGIIVSNHGAR---QL--DYVPAT-IMALEEVVKATQGRIPVFLDGGV---RRG 289 (367)
Q Consensus 222 ~~Pv~vK~v--~~~~~a~~-~~~~G~d~i~vs~~gg~---~~--~~~~~~-~~~l~~i~~~~~~~~~via~GGI---~~~ 289 (367)
+.|++.=+. .+.+++.+ +...|+|++.+.-.... +. +..... .+.|.++++.+ ++||++-+ | .+.
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~-vg~g~s~ 220 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKE-VGFGMDV 220 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEE-CSSCCCH
T ss_pred CCcEEEEeCCCCCHHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEE-CCCCCCH
Confidence 456653322 35666554 45889999998532110 11 111212 36788887776 79999974 6 789
Q ss_pred HHHHHHHHcCCCEEEec
Q 017718 290 TDVFKALALGASGIFIG 306 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig 306 (367)
+++.++..+|||+|.++
T Consensus 221 e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHcCCCEEEEe
Confidence 99999999999999884
No 411
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=86.24 E-value=6.1 Score=34.79 Aligned_cols=130 Identities=15% Similarity=0.090 Sum_probs=76.2
Q ss_pred EEeecCCHHHHHHHHHHHHHcCCcEEEEec-CCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhh
Q 017718 128 QLYVYKDRNVVAQLVRRAERAGFKAIALTV-DTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAG 206 (367)
Q Consensus 128 QLy~~~d~~~~~~~l~ra~~~G~~ai~itv-d~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (367)
.+....|.....+.++.+.+.|++.+-+.+ |.+.. | ++
T Consensus 15 p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~-------------~------~~---------------------- 53 (230)
T 1rpx_A 15 PSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFV-------------P------NI---------------------- 53 (230)
T ss_dssp EBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-------------S------CB----------------------
T ss_pred EEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCcc-------------c------cc----------------------
Confidence 334467777788889999999998876654 32210 1 10
Q ss_pred ccCccc-cHHHHHhhcCCCEEEEec-CCH-HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 207 QIDRSL-SWKWLQTITKLPILVKGV-LTA-EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 207 ~~d~~~-~~~~l~~~~~~Pv~vK~v-~~~-~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
...+ ..+.+++.++.|+.+-.. .++ +.++.+.++|+|+|.++..... . ....+.+..+.+ . .+.++.+
T Consensus 54 --~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~vh~~~~~---~-~~~~~~~~~~~~-~--g~~ig~~ 124 (230)
T 1rpx_A 54 --TIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSS---T-IHLHRTINQIKS-L--GAKAGVV 124 (230)
T ss_dssp --CCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEEECSTTT---C-SCHHHHHHHHHH-T--TSEEEEE
T ss_pred --ccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEEEecCcc---c-hhHHHHHHHHHH-c--CCcEEEE
Confidence 0001 123667666667666543 344 4688899999999999532001 1 223344544433 2 3455554
Q ss_pred cCCCCHHHHHHHHHcCCCEEEech
Q 017718 284 GGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 284 GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
---.+..+.++++..|+|.|.+.+
T Consensus 125 ~~p~t~~e~~~~~~~~~d~vl~~~ 148 (230)
T 1rpx_A 125 LNPGTPLTAIEYVLDAVDLVLIMS 148 (230)
T ss_dssp ECTTCCGGGGTTTTTTCSEEEEES
T ss_pred eCCCCCHHHHHHHHhhCCEEEEEE
Confidence 333466777777778999985443
No 412
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.23 E-value=1.7 Score=40.44 Aligned_cols=105 Identities=15% Similarity=0.045 Sum_probs=61.0
Q ss_pred CCceEEEEeecCCHHHHHHHHHHHHHcC-CcEEEEecCCCCCCchhHHhhhh-cCCCCccccccccccccCccccccc-h
Q 017718 122 PGIRFFQLYVYKDRNVVAQLVRRAERAG-FKAIALTVDTPRLGRREADIKNR-FTLPPFLTLKNFQGLDLGKMDEAND-S 198 (367)
Q Consensus 122 ~~~~~~QLy~~~d~~~~~~~l~ra~~~G-~~ai~itvd~p~~g~r~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~-~ 198 (367)
.-|.++.+...-+.+...+++++++++| ++++.++--.. .+.. -|.+.. ..++.. ....+ +
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~-~~~~-i~~~~~~~~~~~~--------------~~~gG~s 223 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVG-NGLV-IDAESESVVIKPK--------------QGFGGLG 223 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEE-EEEC-EETTTTEESCCGG--------------GGEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCC-cccc-ccCCCCCcccccC--------------cCCCccC
Confidence 3478888876667777888899999999 99988643210 0000 000000 000000 00000 0
Q ss_pred hhHHHhhhccCccccHH---HHHhhc-CCCEEEEec-CCHHHHHHHHHcCCcEEEE
Q 017718 199 GLAAYVAGQIDRSLSWK---WLQTIT-KLPILVKGV-LTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 199 ~~~~~~~~~~d~~~~~~---~l~~~~-~~Pv~vK~v-~~~~~a~~~~~~G~d~i~v 249 (367)
+. . .....|+ .+++.. ++||+.-+- .+.+++..+..+|||+|.+
T Consensus 224 g~--~-----~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 224 GK--Y-----ILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp SG--G-----GHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCSSEEE
T ss_pred cc--c-----ccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 00 0 0011333 677777 899887664 6899999999999999988
No 413
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=86.21 E-value=4 Score=40.36 Aligned_cols=97 Identities=22% Similarity=0.318 Sum_probs=60.8
Q ss_pred c-eEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHH
Q 017718 124 I-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAA 202 (367)
Q Consensus 124 ~-~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (367)
| .++.+-+..+.+.+.++++.++++|+++|+++-.+.. |. ++. .+ .+ ..+.-++..
T Consensus 298 P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~---~~-d~~-~~--------~~---------~~GGlSG~~- 354 (443)
T 1tv5_A 298 PLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ---IN-DIK-SF--------EN---------KKGGVSGAK- 354 (443)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC---CC-CCG-GG--------TT---------CCSEEEEHH-
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc---cc-ccc-cc--------cc---------ccCCcCCCc-
Confidence 6 6888866556667788999999999999988654321 10 000 00 00 000000100
Q ss_pred HhhhccCccccHH---HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 203 YVAGQIDRSLSWK---WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 203 ~~~~~~d~~~~~~---~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
+ ....|+ .+++.+ ++||+.-+ +.+.++|..++.+|||+|.+
T Consensus 355 -~-----~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGAd~Vqi 401 (443)
T 1tv5_A 355 -L-----KDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL 401 (443)
T ss_dssp -H-----HHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTEEEEEE
T ss_pred -c-----hHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 0 011233 677777 79988665 58999999999999999988
No 414
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.17 E-value=4.9 Score=37.60 Aligned_cols=84 Identities=23% Similarity=0.246 Sum_probs=56.1
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC------CCCCCCccchHH-HHHHHHHHhc--CCCcEEEec--CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG------ARQLDYVPATIM-ALEEVVKATQ--GRIPVFLDG--GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g------g~~~~~~~~~~~-~l~~i~~~~~--~~~~via~G--GI~~~~ 290 (367)
+.|+++=++-+.-.|+.+.++|+|+|.+|+.+ | ..|.++.+++ .+..+....+ .++||++|. |..++.
T Consensus 17 ~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G-~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~ 95 (302)
T 3fa4_A 17 DSFIVAPGVYDGLSARVALSAGFDALYMTGAGTAASVHG-QADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPI 95 (302)
T ss_dssp TCCEEEEEECSHHHHHHHHTTTCSCEEECHHHHHHHHHS-CCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHH
T ss_pred CCeEEEecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcC-CCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHH
Confidence 45787778889999999999999999997521 1 2355554443 3333332222 279999976 444665
Q ss_pred HHH----HHHHcCCCEEEec
Q 017718 291 DVF----KALALGASGIFIG 306 (367)
Q Consensus 291 dv~----kal~lGAd~V~ig 306 (367)
++. +....||.+|.|=
T Consensus 96 ~v~~tv~~l~~aGaagv~iE 115 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIE 115 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCcEEEEC
Confidence 544 3445899999774
No 415
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=86.15 E-value=7.3 Score=38.06 Aligned_cols=143 Identities=15% Similarity=0.022 Sum_probs=86.0
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.||+++=+.++..... .+.. .-|.+.... ... . ..+.+ +.+
T Consensus 152 ~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~---~~~~---~~~~~~~~~--------~~~--~---~~~~~----~~d 208 (422)
T 3tji_A 152 GETLEALFASVDALIAQGYRHIRCQLGFYGGT---PSAL---HAPDNPTPG--------AWF--D---QQEYM----SNT 208 (422)
T ss_dssp ESSHHHHHHHHHHHHHTTCSEEEEEESCCCBC---GGGS---CCCSSCCSS--------EEC--C---HHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCcc---cccc---ccccccccc--------ccc--c---chhHH----HHH
Confidence 46788888888888889999998887643110 0000 000000000 000 0 00000 011
Q ss_pred cc-HHHHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 LS-WKWLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~~-~~~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+. .+.+|+.+ +++|.+..- .+.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||++
T Consensus 209 ~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~ 278 (422)
T 3tji_A 209 VEMFHALREKYGWKLHILHDVHERLFPQQAVQLAKQLEPFQPYFIED--------ILPPQQSAWLEQVRQQS--CVPLAL 278 (422)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEEC--------CSCGGGGGGHHHHHHHC--CCCEEE
T ss_pred HHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEE
Confidence 11 23778876 578888754 455554 5566778777641 11223556677887776 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
++.+.+..|+.+++..| +|.|++--
T Consensus 279 dE~~~~~~~~~~ll~~ga~d~v~~k~ 304 (422)
T 3tji_A 279 GELFNNPAEWHDLIVNRRIDFIRCHV 304 (422)
T ss_dssp CTTCCSGGGTHHHHHTTCCSEECCCG
T ss_pred eCCcCCHHHHHHHHhcCCCCEEecCc
Confidence 99999999999999987 79998853
No 416
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=86.13 E-value=6.5 Score=36.52 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCcEEEEc-CCCCCCCCC-ccchHHHHHHHHHHhcCC-CcEEEecCCCCHHHHHHH----HHcCCCEEEec
Q 017718 234 EDARIAVQAGAAGIIVS-NHGARQLDY-VPATIMALEEVVKATQGR-IPVFLDGGVRRGTDVFKA----LALGASGIFIG 306 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs-~~gg~~~~~-~~~~~~~l~~i~~~~~~~-~~via~GGI~~~~dv~ka----l~lGAd~V~ig 306 (367)
.+++.+.+.|||-|.+. |-|. -.++ .....+-|.++++.+++. +.||..-+.-+.+++.++ ..+|||+|--.
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~-lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPW-LSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH-HHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEECC
T ss_pred HHHHHHHHcCCCEEEEEeehhh-hcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcC
Confidence 56889999999999964 3221 1111 122344566676666443 788998888888886654 34799999877
Q ss_pred hHH
Q 017718 307 RPV 309 (367)
Q Consensus 307 ~~~ 309 (367)
+-|
T Consensus 209 TGf 211 (288)
T 3oa3_A 209 TGF 211 (288)
T ss_dssp CSS
T ss_pred CCC
Confidence 644
No 417
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=86.11 E-value=8.3 Score=36.80 Aligned_cols=119 Identities=13% Similarity=0.184 Sum_probs=79.1
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCcc
Q 017718 132 YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRS 211 (367)
Q Consensus 132 ~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 211 (367)
..+++.+.+.++++.+.|++++=+.++... + .+
T Consensus 138 ~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~----~-------------------------------------------~d 170 (368)
T 3q45_A 138 IDEPHKMAADAVQIKKNGFEIIKVKVGGSK----E-------------------------------------------LD 170 (368)
T ss_dssp SCCHHHHHHHHHHHHHTTCSEEEEECCSCH----H-------------------------------------------HH
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEecCCH----H-------------------------------------------HH
Confidence 357777777777777899998876554210 0 01
Q ss_pred c-cHHHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE
Q 017718 212 L-SWKWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL 282 (367)
Q Consensus 212 ~-~~~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via 282 (367)
+ ..+.+|+.+ ++++.+.-- .+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||.+
T Consensus 171 ~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPIa~ 240 (368)
T 3q45_A 171 VERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHCEE--------PVSRNLYTALPKIRQAC--RIPIMA 240 (368)
T ss_dssp HHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEEC--------CBCGGGGGGHHHHHHTC--SSCEEE
T ss_pred HHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEEEC--------CCChhHHHHHHHHHhhC--CCCEEE
Confidence 1 123667666 467777643 34555 44566677776641 11223456677777655 799999
Q ss_pred ecCCCCHHHHHHHHHcC-CCEEEech
Q 017718 283 DGGVRRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 283 ~GGI~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..+.+..|+.+++..| +|.|++--
T Consensus 241 dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 241 DESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp STTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred cCCcCCHHHHHHHHHcCCCCeEEech
Confidence 99999999999999976 79998864
No 418
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=85.90 E-value=21 Score=32.80 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=101.0
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHH-cCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASA-AGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~-~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+ .|+...+ | +..+.+.||-. +. .. -|.+...- ..+-+.
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 455667643222333333466666667 8875432 3 33556766532 21 22 35555553 345666
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ...+ ..++.+ .++.+
T Consensus 88 ai~la~~a~~~Gadavlv~--~P~y-----------------~~~~-------------~~~l~~----------~f~~v 125 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAV--TPFY-----------------YKFS-------------FPEIKH----------YYDTI 125 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEE--CCCS-----------------SCCC-------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEC--CCCC-----------------CCCC-------------HHHHHH----------HHHHH
Confidence 7788999999999999874 2331 0000 001111 23466
Q ss_pred HhhcCCCEEEEec-------CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 218 QTITKLPILVKGV-------LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 218 ~~~~~~Pv~vK~v-------~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
.+.+++||++=.+ .+++...++.+.. +-+|--+ . ..+..+.++.+. ..++.|+ +|. .
T Consensus 126 a~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s--~--------gd~~~~~~~~~~-~~~f~v~-~G~---d 190 (293)
T 1f6k_A 126 IAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFT--A--------GDFYLLERLKKA-YPNHLIW-AGF---D 190 (293)
T ss_dssp HHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEEC--S--------CCHHHHHHHHHH-CTTSEEE-ECC---G
T ss_pred HHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEEEEC--C--------CCHHHHHHHHHh-CCCeEEE-ECc---H
Confidence 6778899998764 5678777776542 2222221 1 123444455544 2355554 342 3
Q ss_pred HHHHHHHHcCCCEEEechHHHH
Q 017718 290 TDVFKALALGASGIFIGRPVVY 311 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig~~~l~ 311 (367)
.-++.++++||+++.-+..-++
T Consensus 191 ~~~~~~l~~G~~G~is~~~n~~ 212 (293)
T 1f6k_A 191 EMMLPAASLGVDGAIGSTFNVN 212 (293)
T ss_dssp GGHHHHHHTTCSEEEESTHHHH
T ss_pred HHHHHHHHCCCcEEEeCHHHhh
Confidence 3478889999999999886543
No 419
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=85.89 E-value=4.3 Score=38.43 Aligned_cols=84 Identities=17% Similarity=0.123 Sum_probs=54.9
Q ss_pred cCCCEEEEec--CCHHH-HHHHHHcCCcEEEEcC-CCCC--CCCCcc---chHHHHHHHHHHhcCCCcEEEe--cCCCCH
Q 017718 221 TKLPILVKGV--LTAED-ARIAVQAGAAGIIVSN-HGAR--QLDYVP---ATIMALEEVVKATQGRIPVFLD--GGVRRG 289 (367)
Q Consensus 221 ~~~Pv~vK~v--~~~~~-a~~~~~~G~d~i~vs~-~gg~--~~~~~~---~~~~~l~~i~~~~~~~~~via~--GGI~~~ 289 (367)
.+.|+++... .+.+. ++.+.++|+|+|.+.. +.-. +..+.+ ..++.+.++++.+ ++||+.- |...+.
T Consensus 115 ~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~~ 192 (349)
T 1p0k_A 115 PNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMSK 192 (349)
T ss_dssp SSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCCH
T ss_pred CCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCCH
Confidence 4688887654 34544 4455678999998742 1100 000111 1456777777766 7899985 444789
Q ss_pred HHHHHHHHcCCCEEEec
Q 017718 290 TDVFKALALGASGIFIG 306 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig 306 (367)
+++.++..+|||+|.+.
T Consensus 193 ~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 99999999999999984
No 420
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.87 E-value=7.5 Score=33.41 Aligned_cols=82 Identities=22% Similarity=0.179 Sum_probs=48.3
Q ss_pred HHHHhhc-CCCEEE--EecCC-HHH-HHHHHHcCCcEEEEcCCCCCCCCCccchHH-HHHHHHHHhcCCCcEEE-ecCCC
Q 017718 215 KWLQTIT-KLPILV--KGVLT-AED-ARIAVQAGAAGIIVSNHGARQLDYVPATIM-ALEEVVKATQGRIPVFL-DGGVR 287 (367)
Q Consensus 215 ~~l~~~~-~~Pv~v--K~v~~-~~~-a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~-~l~~i~~~~~~~~~via-~GGI~ 287 (367)
+.+|+.+ +.|+++ |. .+ ++. ++.+.++|+|+|+++...+ ..... ++..+.+ . .+++.+ --...
T Consensus 45 ~~l~~~~~~~~i~~~l~~-~di~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~-~--g~~~gv~~~s~~ 114 (207)
T 3ajx_A 45 TAVKKAHPDKIVFADMKT-MDAGELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQA-H--NKGVVVDLIGIE 114 (207)
T ss_dssp HHHHHHSTTSEEEEEEEE-CSCHHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECTTCS
T ss_pred HHHHHhCCCCeEEEEEEe-cCccHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHH-c--CCceEEEEecCC
Confidence 4777777 788885 74 46 565 8999999999999953221 11222 2222222 2 344422 22333
Q ss_pred CHHHHHHH-HHcCCCEEEec
Q 017718 288 RGTDVFKA-LALGASGIFIG 306 (367)
Q Consensus 288 ~~~dv~ka-l~lGAd~V~ig 306 (367)
|+.+.++. ..+|+|.|.+.
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEE
T ss_pred ChHHHHHHHHHhCCCEEEEE
Confidence 77774444 45799998554
No 421
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.83 E-value=9.9 Score=36.03 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=57.6
Q ss_pred ceEEEEee------cCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccc
Q 017718 124 IRFFQLYV------YKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAND 197 (367)
Q Consensus 124 ~~~~QLy~------~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (367)
+.++-|-. +.+.+...+++++++++|++.|.++....... ...|
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~---------~~~~--------------------- 270 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLR---------VRIP--------------------- 270 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSS---------SCCC---------------------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcc---------cccC---------------------
Confidence 56776653 23566778889999999999988865321100 0000
Q ss_pred hhhHHHhhhccCccccH---HHHHhhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEE
Q 017718 198 SGLAAYVAGQIDRSLSW---KWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 198 ~~~~~~~~~~~d~~~~~---~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G-~d~i~v 249 (367)
..+...| +.+|+.+++||+.-+. .+.++|+.+++.| +|.|.+
T Consensus 271 ----------~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~i 317 (349)
T 3hgj_A 271 ----------LAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLL 317 (349)
T ss_dssp ----------CCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEE
T ss_pred ----------CCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEe
Confidence 0011122 2788888999988775 5899999999999 999988
No 422
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=85.68 E-value=4.4 Score=37.90 Aligned_cols=68 Identities=16% Similarity=0.077 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEechHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~---GGI~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+-++...++|||.|.+ +| +.+.+.+.++.+.+ ++|++++ +|-.-.-++.+.-.+|.+.|.+|...+
T Consensus 175 ~Ra~ay~~AGAD~if~--~~-------~~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFP--EA-------MKTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp HHHHHHHHTTCSEEEE--CC-------CCSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHH
T ss_pred HHHHhhHhcCCCEEEe--CC-------CCCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHHHcCCeEEEEchHHH
Confidence 3367789999999998 23 34677788888888 5888764 443222234555679999999998776
Q ss_pred HH
Q 017718 311 YS 312 (367)
Q Consensus 311 ~~ 312 (367)
.+
T Consensus 244 ra 245 (298)
T 3eoo_A 244 RA 245 (298)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 423
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=85.68 E-value=23 Score=33.09 Aligned_cols=117 Identities=21% Similarity=0.199 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.||+++=+.++.. -+.|+.
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~----~~~d~~------------------------------------------ 171 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIKVGEN----LKEDIE------------------------------------------ 171 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC----HHHHHH------------------------------------------
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEeecCC----HHHHHH------------------------------------------
Confidence 4777777788888889999998766531 000000
Q ss_pred cHHHHHhhc-CCCEEEEec--CCHHH----HHHHHHcCCc--EEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe
Q 017718 213 SWKWLQTIT-KLPILVKGV--LTAED----ARIAVQAGAA--GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD 283 (367)
Q Consensus 213 ~~~~l~~~~-~~Pv~vK~v--~~~~~----a~~~~~~G~d--~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~ 283 (367)
..+.+|+.- ++++.+-.- .+.++ ++.+.+.|++ .|- +. ..+..++.+.++++.. ++||+++
T Consensus 172 ~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE-------~P-~~~~~~~~~~~l~~~~--~ipia~d 241 (345)
T 2zad_A 172 AVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYE-------QP-VRREDIEGLKFVRFHS--PFPVAAD 241 (345)
T ss_dssp HHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEE-------CC-SCTTCHHHHHHHHHHS--SSCEEES
T ss_pred HHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeee-------CC-CCcccHHHHHHHHHhC--CCCEEEe
Confidence 012444441 245554321 34444 4567788887 553 11 1234577788888776 7999999
Q ss_pred cCCCCHHHHHHHHHcC-CCEEEe
Q 017718 284 GGVRRGTDVFKALALG-ASGIFI 305 (367)
Q Consensus 284 GGI~~~~dv~kal~lG-Ad~V~i 305 (367)
+.+.+..|+.+.+..| +|.|++
T Consensus 242 E~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 242 ESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp TTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCcCCHHHHHHHHHhCCCCEEEE
Confidence 9999999999999987 899999
No 424
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=85.59 E-value=5.6 Score=34.24 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=45.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.++.+.+.|++.|.+.. +. +...+.+.++++.++.++ ++..|-+.+.+++.++...|||++ ++.
T Consensus 27 ~~~~~~~~G~~~iev~~--~~-----~~~~~~i~~ir~~~~~~~-~ig~~~v~~~~~~~~a~~~Gad~i-v~~ 90 (205)
T 1wa3_A 27 KALAVFEGGVHLIEITF--TV-----PDADTVIKELSFLKEKGA-IIGAGTVTSVEQCRKAVESGAEFI-VSP 90 (205)
T ss_dssp HHHHHHHTTCCEEEEET--TS-----TTHHHHHHHTHHHHHTTC-EEEEESCCSHHHHHHHHHHTCSEE-ECS
T ss_pred HHHHHHHCCCCEEEEeC--CC-----hhHHHHHHHHHHHCCCCc-EEEecccCCHHHHHHHHHcCCCEE-EcC
Confidence 36778889999998843 11 233456777766654233 455566889999999999999999 654
No 425
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=85.52 E-value=1.9 Score=40.21 Aligned_cols=86 Identities=22% Similarity=0.291 Sum_probs=53.4
Q ss_pred hcCCCEEEEecC--CHHH----HHHHHHcCC------cEEEEcCCCCCCCCCcc--chHHHHHHHHHHhcCCCcEEEe--
Q 017718 220 ITKLPILVKGVL--TAED----ARIAVQAGA------AGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFLD-- 283 (367)
Q Consensus 220 ~~~~Pv~vK~v~--~~~~----a~~~~~~G~------d~i~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~~~via~-- 283 (367)
.+++||++|..+ ++++ ++.+.+.|. +-|++- |-|....... ..+..++.+++ . .+||+.|
T Consensus 129 ~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~-erg~~y~~~~~~vdl~~i~~lk~-~--~~pV~~D~s 204 (288)
T 3tml_A 129 RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMAC-ERGVSFGYNNLVSDMRSLAIMRE-T--NAPVVFDAT 204 (288)
T ss_dssp TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEE-ECCEECSSSCEECCHHHHHHGGG-G--SSCEEEEHH
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEE-eCCCCCCCCcCcCCHHHHHHHHh-c--CCcEEEcCC
Confidence 468999999975 4433 556667776 556654 3232221111 25667777665 5 7999985
Q ss_pred -------------cCCCCHH--HHHHHHHcCCCEEEechHH
Q 017718 284 -------------GGVRRGT--DVFKALALGASGIFIGRPV 309 (367)
Q Consensus 284 -------------GGI~~~~--dv~kal~lGAd~V~ig~~~ 309 (367)
||-+.-. -...|.++|||+++|=+-+
T Consensus 205 Hs~q~p~~~~~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~ 245 (288)
T 3tml_A 205 HSVQLPGGQGTSSGGQREFVPVLARAAVATGVAGLFMETHP 245 (288)
T ss_dssp HHTCCCC--------CTTHHHHHHHHHHHHCCSEEEEEEES
T ss_pred cccccCCcccCCCCCchhhHHHHHHHHHHcCCCEEEEeecc
Confidence 3443322 3457888999999997644
No 426
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=85.48 E-value=5.6 Score=38.40 Aligned_cols=82 Identities=10% Similarity=-0.029 Sum_probs=60.2
Q ss_pred HHHhhc--CCCEEEEec--C-CHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017718 216 WLQTIT--KLPILVKGV--L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~-~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI 286 (367)
.+|+.+ +.+|.+..- . +.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||++++.+
T Consensus 192 avR~a~G~d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~~~~~~~~l~~~~--~iPIa~dE~~ 261 (394)
T 3mqt_A 192 ELREVIGWDMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEA--------CLQHDDLIGHQKLAAAI--NTRLCGAEMS 261 (394)
T ss_dssp HHHHHHCSSSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHS--SSEEEECTTC
T ss_pred HHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCc
Confidence 677776 578888754 3 55654 4556678777641 11223577788888876 7999999999
Q ss_pred CCHHHHHHHHHcC-CCEEEech
Q 017718 287 RRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 287 ~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+..|+.+++..| +|.|++--
T Consensus 262 ~~~~~~~~~l~~~~~d~v~~k~ 283 (394)
T 3mqt_A 262 TTRFEAQEWLEKTGISVVQSDY 283 (394)
T ss_dssp CHHHHHHHHHHHHCCSEECCCT
T ss_pred CCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999986 89998853
No 427
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=85.43 E-value=9 Score=33.01 Aligned_cols=83 Identities=18% Similarity=0.061 Sum_probs=51.3
Q ss_pred HHHHhh-cCCCEEE--EecCCHHH-HHHHHHcCCcEEEEcCCCCCCCCCccchH-HHHHHHHHHhcCCCcEEEe-cCCCC
Q 017718 215 KWLQTI-TKLPILV--KGVLTAED-ARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFLD-GGVRR 288 (367)
Q Consensus 215 ~~l~~~-~~~Pv~v--K~v~~~~~-a~~~~~~G~d~i~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~~~via~-GGI~~ 288 (367)
+.+|+. .+.||.+ |.....+. ++.+.++|+|+|++.... ..... +.+..+.+ . .++++.+ -+..+
T Consensus 45 ~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~~-~--g~~~~v~~~~~~t 115 (211)
T 3f4w_A 45 KAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAKE-A--GKQVVVDMICVDD 115 (211)
T ss_dssp HHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHHH-H--TCEEEEECTTCSS
T ss_pred HHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHHH-c--CCeEEEEecCCCC
Confidence 477776 4788864 33334554 899999999999994311 11222 23333332 3 4566653 45666
Q ss_pred HH-HHHHHHHcCCCEEEec
Q 017718 289 GT-DVFKALALGASGIFIG 306 (367)
Q Consensus 289 ~~-dv~kal~lGAd~V~ig 306 (367)
.. .+.++..+|+|.|.+.
T Consensus 116 ~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 116 LPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 64 4667777999998875
No 428
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=85.40 E-value=8.3 Score=34.18 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=51.7
Q ss_pred ceEEEE---eecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhh
Q 017718 124 IRFFQL---YVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGL 200 (367)
Q Consensus 124 ~~~~QL---y~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (367)
|.++.+ -..-+.+...++.+.++++|++++.. ++ ++. +
T Consensus 117 pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~t--st------------g~~-~------------------------ 157 (225)
T 1mzh_A 117 SAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKT--ST------------GFA-P------------------------ 157 (225)
T ss_dssp TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEEC--CC------------SCS-S------------------------
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEE--CC------------CCC-C------------------------
Confidence 667777 22345666788899999999999832 21 110 0
Q ss_pred HHHhhhccCccccHH---HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEEc
Q 017718 201 AAYVAGQIDRSLSWK---WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 201 ~~~~~~~~d~~~~~~---~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~vs 250 (367)
+..+|+ .+++.+ ++||+.-+ +.+.+++....++|||.|-++
T Consensus 158 ---------gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~~iG~s 204 (225)
T 1mzh_A 158 ---------RGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTS 204 (225)
T ss_dssp ---------SCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred ---------CCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCchHHHHc
Confidence 001232 556655 57877665 468999999999999976553
No 429
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=85.37 E-value=6.3 Score=35.30 Aligned_cols=77 Identities=21% Similarity=0.183 Sum_probs=52.6
Q ss_pred CEEEEec--CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCC
Q 017718 224 PILVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGA 300 (367)
Q Consensus 224 Pv~vK~v--~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~-lGA 300 (367)
+..||+| .+.|+++ +.++|+|+|=+--+.+. ...-+.+...++.+.. ..++...|=..+.+++.+.+. +|.
T Consensus 20 ~M~VKICGit~~ed~~-a~~~gaD~iGfIf~~~S---pR~V~~~~A~~i~~~~--~~~~~~v~v~v~~~ei~~~i~~~~l 93 (228)
T 4aaj_A 20 HMFVKICGIKSLEELE-IVEKHADATGVVVNSNS---KRRIPLEKAREIIENS--AIPVFLVSTMVGFSEWAMAIERTGA 93 (228)
T ss_dssp CCEEEECCCCSHHHHH-HHHTTCSEEEEECSSSS---TTBCCHHHHHHHHHHC--SSCEEEEECCCCHHHHHHHHHHHTC
T ss_pred ceEEEECCCCcHHHHH-HHHcCCCEEEEEecCCC---CCCCCHHHHHHHHHhh--CCCCEEEeccCchHHHHHHHHhccc
Confidence 4678887 6789986 67899999865322211 1112345555666655 577888777778888887776 799
Q ss_pred CEEEec
Q 017718 301 SGIFIG 306 (367)
Q Consensus 301 d~V~ig 306 (367)
|.||+=
T Consensus 94 d~vQLH 99 (228)
T 4aaj_A 94 QYIQVH 99 (228)
T ss_dssp SEEEEC
T ss_pred hheecc
Confidence 999984
No 430
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=85.32 E-value=12 Score=34.36 Aligned_cols=80 Identities=21% Similarity=0.303 Sum_probs=49.0
Q ss_pred HHHhhcCCCEEEEec--C---CHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE-----
Q 017718 216 WLQTITKLPILVKGV--L---TAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF----- 281 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v--~---~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi----- 281 (367)
.+++..+.|+++-.. . +++. |.+++++|+++|.+- || ....+.++.+.+ ..+||+
T Consensus 71 aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa~aVklE--gg------~e~~~~I~al~~---agipV~gHiGL 139 (264)
T 1m3u_A 71 AVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIE--GG------EWLVETVQMLTE---RAVPVCGHLGL 139 (264)
T ss_dssp HHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTTCSEEECC--CS------GGGHHHHHHHHH---TTCCEEEEEES
T ss_pred HHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEC--Cc------HHHHHHHHHHHH---CCCCeEeeecC
Confidence 566667777777554 1 5544 457889999999883 33 223444444433 368888
Q ss_pred ------EecCC----CCHH-------HHHHHHHcCCCEEEec
Q 017718 282 ------LDGGV----RRGT-------DVFKALALGASGIFIG 306 (367)
Q Consensus 282 ------a~GGI----~~~~-------dv~kal~lGAd~V~ig 306 (367)
..||. ++.. |+..+..+||+++.+-
T Consensus 140 tPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE 181 (264)
T 1m3u_A 140 TPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLE 181 (264)
T ss_dssp CGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 35665 3432 3334445899999873
No 431
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=85.31 E-value=2.5 Score=39.49 Aligned_cols=83 Identities=25% Similarity=0.246 Sum_probs=53.5
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-CC---CCCCccchHH----HHHHHHHHhcCCCcEEEec--CCCCHHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR---QLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVRRGTD 291 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g~---~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~~~~d 291 (367)
+-|+++=++-+.-.|+.+.++|+|+|.+++.+ +. ..|.++-+++ .+..|.+.. ++||++|. |..+..+
T Consensus 18 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~--~~PviaD~d~Gyg~~~~ 95 (295)
T 1s2w_A 18 KDLEFIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS--DVPILLDADTGYGNFNN 95 (295)
T ss_dssp SSCEEEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC--SSCEEEECCSSCSSHHH
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEecCCCCCCCHHH
Confidence 56898888899999999999999999998631 11 1233333332 233444433 79999976 4556555
Q ss_pred HH----HHHHcCCCEEEec
Q 017718 292 VF----KALALGASGIFIG 306 (367)
Q Consensus 292 v~----kal~lGAd~V~ig 306 (367)
+. +.+..||.+|.|=
T Consensus 96 v~~~v~~l~~aGaagv~iE 114 (295)
T 1s2w_A 96 ARRLVRKLEDRGVAGACLE 114 (295)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEEC
Confidence 54 3456899999873
No 432
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=85.28 E-value=2.3 Score=39.41 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=47.0
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchH---HHHHHHHHHhcCCCcEEE-ecCCCCHHHHHH----HHHcCCCEEEech
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATI---MALEEVVKATQGRIPVFL-DGGVRRGTDVFK----ALALGASGIFIGR 307 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~---~~l~~i~~~~~~~~~via-~GGI~~~~dv~k----al~lGAd~V~ig~ 307 (367)
++.+.+.|+|+|++.|+.|-. ...+.- +++..+++.+.+ ||+ .|+..+ .++++ +-.+|||++++-.
T Consensus 26 v~~li~~Gv~gl~v~GtTGE~--~~Ls~eEr~~v~~~~~~~~~g---ViaGvg~~~t-~~ai~la~~A~~~Gadavlv~~ 99 (288)
T 2nuw_A 26 AKNLLEKGIDAIFVNGTTGLG--PALSKDEKRQNLNALYDVTHK---LIFQVGSLNL-NDVMELVKFSNEMDILGVSSHS 99 (288)
T ss_dssp HHHHHHTTCCEEEETSTTTTG--GGSCHHHHHHHHHHHTTTCSC---EEEECCCSCH-HHHHHHHHHHHTSCCSEEEECC
T ss_pred HHHHHHcCCCEEEECccccCh--hhCCHHHHHHHHHHHHHHhCC---eEEeeCCCCH-HHHHHHHHHHHhcCCCEEEEcC
Confidence 456788999999996654421 122222 233333333332 554 444444 44443 2337999999999
Q ss_pred HHHHHhhccChHHHHHHHHHH
Q 017718 308 PVVYSLAAEGEKGVRRVLEML 328 (367)
Q Consensus 308 ~~l~~l~~~G~~~v~~~i~~l 328 (367)
|+++. .-.++++.++++.+
T Consensus 100 P~y~~--~~s~~~l~~~f~~v 118 (288)
T 2nuw_A 100 PYYFP--RLPEKFLAKYYEEI 118 (288)
T ss_dssp CCSSC--SCCHHHHHHHHHHH
T ss_pred CcCCC--CCCHHHHHHHHHHH
Confidence 98763 01455555555444
No 433
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=85.24 E-value=7.9 Score=33.29 Aligned_cols=35 Identities=26% Similarity=0.474 Sum_probs=29.5
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcCCcEEEEc
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs 250 (367)
.+++..++|+++-+..+.+++..+.++|+|+++++
T Consensus 156 ~l~~~~~~pvia~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 156 KIVESVKIPVVAIGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp HHHHHCSSCEEEESSCCTTTHHHHHTTTCSEEEES
T ss_pred HHHHhCCCCEEEECCcCHHHHHHHHHcCCCEEEEh
Confidence 55556689999988777888988999999999984
No 434
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=85.16 E-value=4.7 Score=38.64 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=30.6
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G-~d~i~v 249 (367)
.+|+.+++||+.-+..+.++|+.+++.| +|+|.+
T Consensus 287 ~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 287 ALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 7888899999988877999999999998 999987
No 435
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=85.09 E-value=7.3 Score=37.19 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=56.5
Q ss_pred hhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-
Q 017718 219 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA- 297 (367)
Q Consensus 219 ~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~- 297 (367)
+..+++++ -.+++.+.+..+.+.|+|.+-+.. .-...+.+|.++.+ ...|||.+-|..|-+++..|..
T Consensus 88 ~~~Gi~~~-st~fD~~svd~l~~~~v~~~KI~S-------~~~~N~pLL~~va~---~gKPviLstGmstl~Ei~~Ave~ 156 (350)
T 3g8r_A 88 KANGFKAI-CTPFDEESVDLIEAHGIEIIKIAS-------CSFTDWPLLERIAR---SDKPVVASTAGARREDIDKVVSF 156 (350)
T ss_dssp HHTTCEEE-EEECSHHHHHHHHHTTCCEEEECS-------SSTTCHHHHHHHHT---SCSCEEEECTTCCHHHHHHHHHH
T ss_pred HHcCCcEE-eccCCHHHHHHHHHcCCCEEEECc-------ccccCHHHHHHHHh---hCCcEEEECCCCCHHHHHHHHHH
Confidence 44678774 467899999999999999999932 12346677777754 2789999999999999987765
Q ss_pred ---cCCCEEEe
Q 017718 298 ---LGASGIFI 305 (367)
Q Consensus 298 ---lGAd~V~i 305 (367)
.|.+ |.+
T Consensus 157 i~~~g~~-viL 166 (350)
T 3g8r_A 157 MLHRGKD-LTI 166 (350)
T ss_dssp HHTTTCC-EEE
T ss_pred HHHcCCC-EEE
Confidence 3666 444
No 436
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=85.03 E-value=8.1 Score=37.35 Aligned_cols=81 Identities=16% Similarity=0.129 Sum_probs=58.7
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.. +++|.+..- .+.++ ++.+.+.|++.|-- ...+..++.+.++++.+ ++||++++.+.
T Consensus 202 avRea~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 271 (410)
T 2qq6_A 202 AVREAVGPEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWLEE--------PTPPENLDALAEVRRST--STPICAGENVY 271 (410)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEEC--------CSCTTCHHHHHHHHTTC--SSCEEECTTCC
T ss_pred HHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeEEC--------CCChhhHHHHHHHHhhC--CCCEEeCCCcC
Confidence 677766 478887653 45555 44566678876641 11223577777877655 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEec
Q 017718 288 RGTDVFKALALG-ASGIFIG 306 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig 306 (367)
+..++.+++..| +|.|++-
T Consensus 272 ~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 272 TRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp SHHHHHHHHHTTCCSEECCB
T ss_pred CHHHHHHHHHcCCCCEEecC
Confidence 999999999987 8999884
No 437
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.01 E-value=2.7 Score=39.57 Aligned_cols=76 Identities=14% Similarity=0.158 Sum_probs=55.2
Q ss_pred HHHhhcCCCEEEEecC-C---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 216 WLQTITKLPILVKGVL-T---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~-~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
.+++.++.|+.+.... + .+.++.+.++|+|.|.++ +|. | .+.+..+++ . .++|+. ++.+.++
T Consensus 71 ~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~--~g~-----p--~~~~~~l~~-~--g~~v~~--~v~s~~~ 136 (326)
T 3bo9_A 71 ELRQKTDKPFGVNIILVSPWADDLVKVCIEEKVPVVTFG--AGN-----P--TKYIRELKE-N--GTKVIP--VVASDSL 136 (326)
T ss_dssp HHHTTCSSCEEEEEETTSTTHHHHHHHHHHTTCSEEEEE--SSC-----C--HHHHHHHHH-T--TCEEEE--EESSHHH
T ss_pred HHHHhcCCCEEEEEeccCCCHHHHHHHHHHCCCCEEEEC--CCC-----c--HHHHHHHHH-c--CCcEEE--EcCCHHH
Confidence 6666667899887654 2 356888899999999883 331 1 344444443 2 577775 5889999
Q ss_pred HHHHHHcCCCEEEe
Q 017718 292 VFKALALGASGIFI 305 (367)
Q Consensus 292 v~kal~lGAd~V~i 305 (367)
+.++...|||++.+
T Consensus 137 a~~a~~~GaD~i~v 150 (326)
T 3bo9_A 137 ARMVERAGADAVIA 150 (326)
T ss_dssp HHHHHHTTCSCEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 99999999999998
No 438
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=84.93 E-value=3.9 Score=37.29 Aligned_cols=35 Identities=31% Similarity=0.391 Sum_probs=29.2
Q ss_pred HHHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs 250 (367)
+.+|+.+++||++... .++++++.+.+ ++|+++|.
T Consensus 192 ~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG 227 (252)
T 3tha_A 192 KEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVG 227 (252)
T ss_dssp HHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEEC
T ss_pred HHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEEC
Confidence 4788888999999875 58999988876 69999994
No 439
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=84.77 E-value=7.2 Score=37.19 Aligned_cols=82 Identities=12% Similarity=-0.008 Sum_probs=58.8
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ ++++.+..- -+.++ ++.+.+.|++.|-= ...+..++.+.++++.. .+||.++.-+.
T Consensus 180 avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEq--------P~~~~~~~~~~~l~~~~--~iPia~dE~~~ 249 (370)
T 1chr_A 180 ALSNSLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQ--------PVGRENTQALRRLSDNN--RVAIMADESLS 249 (370)
T ss_dssp HHHHHSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEEC--------CSCTTCHHHHHHHHHHS--CSEEEESSSCC
T ss_pred HHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHhhC--CCCEEeCCCcC
Confidence 677776 368888753 23333 45667777766531 11233567788888776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 250 ~~~~~~~~~~~~~~d~v~~k~ 270 (370)
T 1chr_A 250 TLASAFDLARDRSVDVFSLKL 270 (370)
T ss_dssp SHHHHHHHHTTTSCSEEEECT
T ss_pred CHHHHHHHHHcCCCCEEEECc
Confidence 999999999986 89999853
No 440
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=84.73 E-value=5.6 Score=38.89 Aligned_cols=83 Identities=8% Similarity=-0.067 Sum_probs=60.9
Q ss_pred HHHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017718 215 KWLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 215 ~~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI 286 (367)
+.+|+.+ +++|.+..- .+.++ ++.+.+.|++.|--- ..+..++.+.++++.+ .+||++++.+
T Consensus 218 ~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~dE~~ 287 (425)
T 3vcn_A 218 ERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDS--------VPAENQAGFRLIRQHT--TTPLAVGEIF 287 (425)
T ss_dssp HHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCCSSTTHHHHHHHHC--CSCEEECTTC
T ss_pred HHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChhhHHHHHHHHhcC--CCCEEeCCCc
Confidence 3788876 578888754 35555 456677888877521 1122456677787776 7999999999
Q ss_pred CCHHHHHHHHHcC-CCEEEech
Q 017718 287 RRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 287 ~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+..|+.+++..| +|.|++--
T Consensus 288 ~~~~~~~~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 288 AHVWDAKQLIEEQLIDYLRATV 309 (425)
T ss_dssp CSGGGTHHHHHTTCCSEECCCT
T ss_pred CCHHHHHHHHHcCCCCeEecCh
Confidence 9999999999987 89998864
No 441
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=84.72 E-value=3.6 Score=38.76 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=54.8
Q ss_pred HHHhhcCCCEEEEecC-C---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH
Q 017718 216 WLQTITKLPILVKGVL-T---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD 291 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~-~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d 291 (367)
.+++.++.|+.+.... + .+.++.+.++|+|+|.+ |+|. | .+.+..+++ . .+||+.. +.+.++
T Consensus 57 ~i~~~~~~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~--~~g~-----p--~~~i~~l~~-~--g~~v~~~--v~~~~~ 122 (332)
T 2z6i_A 57 KIKSLTDKPFGVNIMLLSPFVEDIVDLVIEEGVKVVTT--GAGN-----P--SKYMERFHE-A--GIIVIPV--VPSVAL 122 (332)
T ss_dssp HHHHHCCSCEEEEECTTSTTHHHHHHHHHHTTCSEEEE--CSSC-----G--GGTHHHHHH-T--TCEEEEE--ESSHHH
T ss_pred HHHHhcCCCEEEEecCCCCCHHHHHHHHHHCCCCEEEE--CCCC-----h--HHHHHHHHH-c--CCeEEEE--eCCHHH
Confidence 5666667899887664 3 35588899999999998 3331 1 234444443 2 5788864 788999
Q ss_pred HHHHHHcCCCEEEe
Q 017718 292 VFKALALGASGIFI 305 (367)
Q Consensus 292 v~kal~lGAd~V~i 305 (367)
+.++...|+|++.+
T Consensus 123 a~~~~~~GaD~i~v 136 (332)
T 2z6i_A 123 AKRMEKIGADAVIA 136 (332)
T ss_dssp HHHHHHTTCSCEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 98888999999998
No 442
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=84.58 E-value=3.2 Score=37.96 Aligned_cols=69 Identities=14% Similarity=0.297 Sum_probs=50.0
Q ss_pred CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 232 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 232 ~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
++.+.....++||++|.|-.-. ..-....+.|.++++.+ ++||+---=|-++.++.++-++|||+|.+=
T Consensus 65 dp~~iA~~~~~GA~aiSVLTd~----~~F~Gs~~~L~~vr~~v--~lPvLrKDFiid~yQI~eAr~~GADaILLI 133 (258)
T 4a29_A 65 DPIEYAKFMERYAVGLSITTEE----KYFNGSYETLRKIASSV--SIPILMSDFIVKESQIDDAYNLGADTVLLI 133 (258)
T ss_dssp CHHHHHHHHTTTCSEEEEECCS----TTTCCCHHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHhCCCeEEEEeCCC----CCCCCCHHHHHHHHHhc--CCCEeeccccccHHHHHHHHHcCCCeeehH
Confidence 4444334667999999884211 11123556677777766 799998777899999999999999999764
No 443
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=84.31 E-value=7.6 Score=37.07 Aligned_cols=86 Identities=19% Similarity=0.148 Sum_probs=56.7
Q ss_pred ceEEEEeec-------CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCcccccc
Q 017718 124 IRFFQLYVY-------KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEAN 196 (367)
Q Consensus 124 ~~~~QLy~~-------~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 196 (367)
+.++-|-.. .+.+...+++++++++|++.|.++........ ..|.
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~---------~~~~------------------- 278 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDT---------NIPW------------------- 278 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCC---------CCCC-------------------
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcccccc---------ccCC-------------------
Confidence 566766432 23456677888899999999988764211000 0000
Q ss_pred chhhHHHhhhccCccc--cH-HHHHhhcCCCEEEEec-CCHHHHHHHHHcC-CcEEEE
Q 017718 197 DSGLAAYVAGQIDRSL--SW-KWLQTITKLPILVKGV-LTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 197 ~~~~~~~~~~~~d~~~--~~-~~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G-~d~i~v 249 (367)
.+.. .+ +.+|+.+++||+.-+. .+.++|+.+++.| +|.|.+
T Consensus 279 ------------~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 279 ------------GPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp ------------CTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEEC
T ss_pred ------------CcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEe
Confidence 0111 22 2788888999988776 4799999999999 999877
No 444
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=84.30 E-value=7.8 Score=37.09 Aligned_cols=82 Identities=13% Similarity=0.049 Sum_probs=58.8
Q ss_pred HHHhhc--CCCEEEEec--CCH----HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~----~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ ++++.+..- -+. +-++.+.+.|++.|-= ...+..++.+.++++.. .+||.++.-+.
T Consensus 183 avR~~~g~~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~ipIa~dE~~~ 252 (377)
T 3my9_A 183 TMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAFRPTFIEQ--------PVPRRHLDAMAGFAAAL--DTPILADESCF 252 (377)
T ss_dssp HHHHHHGGGSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEEC--------CSCTTCHHHHHHHHHHC--SSCEEESTTCS
T ss_pred HHHHHhCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEEC--------CCCccCHHHHHHHHHhC--CCCEEECCccC
Confidence 666665 467777643 222 3466677778877641 11223577788888776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 253 ~~~~~~~~i~~~~~d~v~~k~ 273 (377)
T 3my9_A 253 DAVDLMEVVRRQAADAISVKI 273 (377)
T ss_dssp SHHHHHHHHHHTCCSEEECCH
T ss_pred CHHHHHHHHHcCCCCEEEecc
Confidence 999999999987 89998764
No 445
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=84.28 E-value=7.5 Score=37.51 Aligned_cols=82 Identities=9% Similarity=-0.063 Sum_probs=60.0
Q ss_pred HHHhhc--CCCEEEEec--C-CHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC
Q 017718 216 WLQTIT--KLPILVKGV--L-TAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV 286 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~-~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI 286 (367)
.+|+.+ +.+|.+..- . +.++| +.+.+.|++.|-- ...+..++.+.++++.+ .+||++++.+
T Consensus 197 avR~a~G~d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~ 266 (394)
T 3mkc_A 197 ELRGILGHDTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAEA--------TLQHDDLSGHAKLVENT--RSRICGAEMS 266 (394)
T ss_dssp HHHHHHCSSSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEES--------CSCTTCHHHHHHHHHHC--SSCBEECTTC
T ss_pred HHHHHhCCCCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEEC--------CCCchhHHHHHHHHhhC--CCCEEeCCCC
Confidence 677776 578887654 3 55654 4556677777642 11223567788888776 7999999999
Q ss_pred CCHHHHHHHHHcC-CCEEEech
Q 017718 287 RRGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 287 ~~~~dv~kal~lG-Ad~V~ig~ 307 (367)
.+..|+.+++..| +|.|++--
T Consensus 267 ~~~~~~~~~l~~~~~d~v~~k~ 288 (394)
T 3mkc_A 267 TTRFEAEEWITKGKVHLLQSDY 288 (394)
T ss_dssp CHHHHHHHHHHTTCCSEECCCT
T ss_pred CCHHHHHHHHHcCCCCeEecCc
Confidence 9999999999987 89998853
No 446
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=84.26 E-value=3 Score=40.90 Aligned_cols=98 Identities=21% Similarity=0.289 Sum_probs=60.8
Q ss_pred Cc-eEEEEeecCCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhH
Q 017718 123 GI-RFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLA 201 (367)
Q Consensus 123 ~~-~~~QLy~~~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (367)
.| .++.|-+.-+.+.+.++++.++++|+++|+++--+. .|. |+.. + .+ ..+.-++.
T Consensus 269 ~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~---~r~-dl~~-~--------~~---------~~GGlSG~- 325 (415)
T 3i65_A 269 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT---QIN-DIKS-F--------EN---------KKGGVSGA- 325 (415)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS---CCC-CCGG-G--------TT---------CCSEEEEG-
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc---ccc-cccc-c--------cc---------ccCCcCCc-
Confidence 46 688887766777788999999999999998753221 110 1110 0 00 00000000
Q ss_pred HHhhhccCccccHH---HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 202 AYVAGQIDRSLSWK---WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 202 ~~~~~~~d~~~~~~---~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
......++ .+++.+ ++||+.-+ +.+.+||..+..+|||+|.+
T Consensus 326 ------a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 326 ------KLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGASVCQL 373 (415)
T ss_dssp ------GGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEE
T ss_pred ------cchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 01111222 667777 68987655 58899999999999999988
No 447
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.22 E-value=3 Score=39.23 Aligned_cols=67 Identities=21% Similarity=0.169 Sum_probs=44.9
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~---GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
++...++|||.|.+- | +.+.+.+.++.+.++ .+|+.++ ||-...-.+.+.-.+|.+.|..+...+.+
T Consensus 184 a~ay~eAGAD~ifi~--~-------~~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~lGv~~v~~~~~~~ra 253 (307)
T 3lye_A 184 LRAARDEGADVGLLE--G-------FRSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAP 253 (307)
T ss_dssp HHHHHHTTCSEEEEC--C-------CSCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHH
T ss_pred HHHHHHCCCCEEEec--C-------CCCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHHcCCeEEEEChHHHHH
Confidence 667789999999982 2 346677788888774 4777653 44221123444556899999888766553
No 448
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=83.97 E-value=13 Score=35.95 Aligned_cols=82 Identities=15% Similarity=0.059 Sum_probs=57.8
Q ss_pred HHHhhc--CCCEEEEec--CC---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017718 216 WLQTIT--KLPILVKGV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 288 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~ 288 (367)
.+|+.+ +++|.+.-- -+ .+.++.+.+.|++.|- + ...+..++.+.++++.. .+||.++.-+.+
T Consensus 197 avR~a~G~~~~L~vDaN~~w~~~~~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~ 266 (400)
T 3mwc_A 197 ETRRAVGDHFPLWTDANSSFELDQWETFKAMDAAKCLFHE-------Q-PLHYEALLDLKELGERI--ETPICLDESLIS 266 (400)
T ss_dssp HHHHHHCTTSCEEEECTTCCCGGGHHHHHHHGGGCCSCEE-------S-CSCTTCHHHHHHHHHHS--SSCEEESTTCCS
T ss_pred HHHHhcCCCCEEEEeCCCCCCHHHHHHHHHHHhcCCCEEe-------C-CCChhhHHHHHHHHhhC--CCCEEEeCCcCC
Confidence 555555 466766532 11 3456667777877663 1 11233577788888776 799999999999
Q ss_pred HHHHHHHHHcC-CCEEEech
Q 017718 289 GTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 289 ~~dv~kal~lG-Ad~V~ig~ 307 (367)
..|+.+++..| +|.|++--
T Consensus 267 ~~~~~~~~~~~~~d~v~~k~ 286 (400)
T 3mwc_A 267 SRVAEFVAKLGISNIWNIKI 286 (400)
T ss_dssp HHHHHHHHHTTCCSEEEECH
T ss_pred HHHHHHHHhcCCCCEEEEcc
Confidence 99999999987 79998864
No 449
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=83.92 E-value=3.3 Score=38.59 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=48.9
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcC-CCEEEechHHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALG-ASGIFIGRPVVYS 312 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lG-Ad~V~ig~~~l~~ 312 (367)
+.|+...++|||.|.+ +++ +++.+.+.++.+.+..++|++++-.-...-++.+.-.+| .+.|..|...+.+
T Consensus 170 ~Ra~ay~eAGAd~i~~--e~~------~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~~v~~~~~~~ra 241 (290)
T 2hjp_A 170 RRGQAYEEAGADAILI--HSR------QKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRA 241 (290)
T ss_dssp HHHHHHHHTTCSEEEE--CCC------CSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHH
T ss_pred HHHHHHHHcCCcEEEe--CCC------CCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCeeEEEechHHHHH
Confidence 4578899999999998 222 345567788888885459999852100112344555699 9999999877764
No 450
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=83.88 E-value=5.5 Score=36.71 Aligned_cols=64 Identities=22% Similarity=0.346 Sum_probs=47.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEec--CCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDG--GVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~G--GI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
.++...++|||.|.+- +.++.+.+.++.+.+ ++|+-... +..+ +.+.-.+|.+.|..+...+.+
T Consensus 173 Ra~ay~eAGAd~i~~e---------~~~~~~~~~~i~~~~--~~P~n~~~~~~~~~---~~eL~~lGv~~v~~~~~~~ra 238 (275)
T 2ze3_A 173 RGQAYADAGADGIFVP---------LALQSQDIRALADAL--RVPLNVMAFPGSPV---PRALLDAGAARVSFGQSLMLA 238 (275)
T ss_dssp HHHHHHHTTCSEEECT---------TCCCHHHHHHHHHHC--SSCEEEECCTTSCC---HHHHHHTTCSEEECTTHHHHH
T ss_pred HHHHHHHCCCCEEEEC---------CCCCHHHHHHHHHhc--CCCEEEecCCCCCC---HHHHHHcCCcEEEEChHHHHH
Confidence 3678899999999982 245677888888888 68876654 3344 345557999999999877654
No 451
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=83.68 E-value=7.1 Score=37.89 Aligned_cols=80 Identities=10% Similarity=-0.037 Sum_probs=60.4
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +.+|.+..- .+.++ ++.+.+.|++.|-.- ...++.+.++++.+ .+||++++.+.
T Consensus 205 avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P----------~~d~~~~~~l~~~~--~iPIa~dE~~~ 272 (409)
T 3go2_A 205 ALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEID----------SYSPQGLAYVRNHS--PHPISSCETLF 272 (409)
T ss_dssp HHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECC----------CSCHHHHHHHHHTC--SSCEEECTTCC
T ss_pred HHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEEeC----------cCCHHHHHHHHhhC--CCCEEeCCCcC
Confidence 778776 578888754 45555 445566788877631 12567778887765 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 273 ~~~~~~~~i~~~~~d~v~~k~ 293 (409)
T 3go2_A 273 GIREFKPFFDANAVDVAIVDT 293 (409)
T ss_dssp HHHHHHHHHHTTCCSEEEECH
T ss_pred CHHHHHHHHHhCCCCEEEeCC
Confidence 999999999987 79998864
No 452
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=83.68 E-value=10 Score=36.94 Aligned_cols=82 Identities=9% Similarity=-0.072 Sum_probs=60.4
Q ss_pred HHHhhc--CCCEEEEec--CCHHH----HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAED----ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +.+|.+..- .+.++ ++.+.+.|++.|--- ..+..++.+.++++.+ .+||++++.+.
T Consensus 218 avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP--------~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 287 (424)
T 3v3w_A 218 AVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDA--------VPAENQESFKLIRQHT--TTPLAVGEVFN 287 (424)
T ss_dssp HHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECC--------SCCSSTTHHHHHHHHC--CSCEEECTTCC
T ss_pred HHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECC--------CChHhHHHHHHHHhhC--CCCEEEccCcC
Confidence 778876 578888754 35555 455667788877421 1122456677787776 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 288 ~~~~~~~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 288 SIHDCRELIQNQWIDYIRTTI 308 (424)
T ss_dssp SGGGTHHHHHTTCCSEECCCT
T ss_pred CHHHHHHHHHcCCCCeEeecc
Confidence 999999999987 79998864
No 453
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=83.01 E-value=5.9 Score=37.16 Aligned_cols=85 Identities=20% Similarity=0.210 Sum_probs=55.9
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-C---C-CCCCccchHH-HHHHHHHHhcC---CCcEEEec--CCCCHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-A---R-QLDYVPATIM-ALEEVVKATQG---RIPVFLDG--GVRRGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g---~-~~~~~~~~~~-~l~~i~~~~~~---~~~via~G--GI~~~~ 290 (367)
+.|+++=++-+.-.|+.+.++|+|+|.+|+.+ + . ..|.++.+++ .+..+....+. ++||++|. |..++.
T Consensus 24 ~~~i~~~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~~~ 103 (307)
T 3lye_A 24 DELIVCPGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGGPI 103 (307)
T ss_dssp CCCEEEEEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSSHH
T ss_pred CCeEEEecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCCHH
Confidence 45788888899999999999999999997532 1 0 2355554544 33333222221 48999976 544665
Q ss_pred HHH----HHHHcCCCEEEec
Q 017718 291 DVF----KALALGASGIFIG 306 (367)
Q Consensus 291 dv~----kal~lGAd~V~ig 306 (367)
++. +....||.+|.|=
T Consensus 104 ~v~~~v~~l~~aGaagv~iE 123 (307)
T 3lye_A 104 MVARTVEHYIRSGVAGAHLE 123 (307)
T ss_dssp HHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHcCCeEEEEc
Confidence 544 3445899999774
No 454
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=82.91 E-value=5.7 Score=38.10 Aligned_cols=42 Identities=24% Similarity=0.386 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 263 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 263 ~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.++.+.++++.. ++||+. +|+.+.+++.++..+|||+|.++.
T Consensus 213 ~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 213 SWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHHTTCSEEEECC
T ss_pred hHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHHcCCCEEEECC
Confidence 345677777766 789996 778999999999999999999953
No 455
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=82.56 E-value=11 Score=33.84 Aligned_cols=35 Identities=23% Similarity=0.311 Sum_probs=28.9
Q ss_pred HHHhh--cCCCEEEEecCCHHHHHHHHHcCCcEEEEc
Q 017718 216 WLQTI--TKLPILVKGVLTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 216 ~l~~~--~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs 250 (367)
++++. .++||+.-+..+.+++..+.++|+|+|.|.
T Consensus 183 ~~~~~~~~~iPvvAiGGI~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 183 VAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHHTC---CCCEEEESSCCTTTHHHHHHTTCCCEEES
T ss_pred HHHHhccCCCCEEEecCCCHHHHHHHHHcCCCEEEEe
Confidence 55554 479999888789999999999999999983
No 456
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=82.16 E-value=3.4 Score=39.25 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=61.1
Q ss_pred cCCCEEEEecCCHHHHHHHHHcCCcEEEEc-C---------CCCCCCC-CccchHHHHHHHH---HHhcCCCcEEEecCC
Q 017718 221 TKLPILVKGVLTAEDARIAVQAGAAGIIVS-N---------HGARQLD-YVPATIMALEEVV---KATQGRIPVFLDGGV 286 (367)
Q Consensus 221 ~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs-~---------~gg~~~~-~~~~~~~~l~~i~---~~~~~~~~via~GGI 286 (367)
-++++-+-.+.+...+..+.++|+.+|... | .|..... ..-+....+.++. +..+.+..|++. .+
T Consensus 153 ~GI~~N~TliFS~~Qa~~aa~AGa~~ISPFVgRi~D~~~~~~g~~~~~~~~d~Gv~~v~~i~~~y~~~g~~T~vl~A-Sf 231 (334)
T 3hjz_A 153 EGIKCNLTLLFNFCQAVTCANANITLISPFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGFKTEVMGA-SF 231 (334)
T ss_dssp TTCCEEEESCCSHHHHHHHHHTTCSEECCBHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTCCCEEEEB-CC
T ss_pred CCCcEEEEEeCCHHHHHHHHHcCCcEEEeeccHHHHHhhhccCCcccccccCcHHHHHHHHHHHHHHcCCCCEEEEe-cC
Confidence 489999999999999999999999887642 1 0211110 0012334444444 333335666665 59
Q ss_pred CCHHHHHHHHHcCCCEEEechHHHHHhh
Q 017718 287 RRGTDVFKALALGASGIFIGRPVVYSLA 314 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l~~l~ 314 (367)
|+..++.. .+|||.+-|.-.++..+.
T Consensus 232 Rn~~~v~~--laG~d~~Tipp~ll~~L~ 257 (334)
T 3hjz_A 232 RNLDEIKE--LAGCDLLTIAPKFLEELK 257 (334)
T ss_dssp SSHHHHHH--TTTCSEEEECHHHHHHHH
T ss_pred CCHHHHHH--HhCCCEEEcCHHHHHHHH
Confidence 99999997 469999999888776653
No 457
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=82.13 E-value=14 Score=35.03 Aligned_cols=81 Identities=10% Similarity=0.083 Sum_probs=53.1
Q ss_pred HHHhhc-CCCEEEEec--CC---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 216 WLQTIT-KLPILVKGV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v--~~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
.+|+.+ ++++.+--- -+ .+-++.+.+.|++.|-= . ..+..++.+.++++.. .+||.++.-+.+.
T Consensus 175 avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iEq-------P-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~ 244 (369)
T 2zc8_A 175 AVREAFPEATLTADANSAYSLANLAQLKRLDELRLDYIEQ-------P-LAYDDLLDHAKLQREL--STPICLDESLTGA 244 (369)
T ss_dssp HHHHHCTTSCEEEECTTCCCGGGHHHHHGGGGGCCSCEEC-------C-SCTTCSHHHHHHHHHC--SSCEEESTTCCSH
T ss_pred HHHHHcCCCeEEEecCCCCCHHHHHHHHHHHhCCCcEEEC-------C-CCcccHHHHHHHHhhC--CCCEEEcCccCCH
Confidence 444443 455555422 12 23344455667666541 1 1123566777777766 7999999999999
Q ss_pred HHHHHHHHcC-CCEEEec
Q 017718 290 TDVFKALALG-ASGIFIG 306 (367)
Q Consensus 290 ~dv~kal~lG-Ad~V~ig 306 (367)
.|+.+++..| +|.|++-
T Consensus 245 ~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 245 EKARKAIELGAGRVFNVK 262 (369)
T ss_dssp HHHHHHHHHTCCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEEc
Confidence 9999999988 8999984
No 458
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=82.12 E-value=7.5 Score=35.41 Aligned_cols=83 Identities=22% Similarity=0.265 Sum_probs=56.8
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC-CC---CCCCccchHH----HHHHHHHHhcCCCcEEEecCCCC----H
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG-AR---QLDYVPATIM----ALEEVVKATQGRIPVFLDGGVRR----G 289 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g~---~~~~~~~~~~----~l~~i~~~~~~~~~via~GGI~~----~ 289 (367)
+.|+++=++-+.-.|+.+.++|+|+|.+++.+ +. ..|.++-+++ ....|.+.+ ++||++|.-... .
T Consensus 19 ~~~i~~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~--~~pviaD~~~Gyg~~~~ 96 (255)
T 2qiw_A 19 GKLLVLPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAV--SIPVSVDVESGYGLSPA 96 (255)
T ss_dssp CCCEECCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHC--SSCEEEECTTCTTCCHH
T ss_pred CCcEEEecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcC--CCCEEeccCCCcCcHHH
Confidence 56888878888999999999999999997521 10 1344444443 344454544 699999763322 4
Q ss_pred HHHHHHHHcCCCEEEec
Q 017718 290 TDVFKALALGASGIFIG 306 (367)
Q Consensus 290 ~dv~kal~lGAd~V~ig 306 (367)
..+.+.+..||++|.|=
T Consensus 97 ~~~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVE 113 (255)
T ss_dssp HHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHcCCcEEEEC
Confidence 45667777999999873
No 459
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=82.07 E-value=13 Score=35.36 Aligned_cols=81 Identities=25% Similarity=0.214 Sum_probs=53.4
Q ss_pred HHHhhc-CCCEEEEec--CC---HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCH
Q 017718 216 WLQTIT-KLPILVKGV--LT---AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRG 289 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v--~~---~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~ 289 (367)
.+|+.+ ++++.+.-- -+ .+-++.+.+.|++.|- +. ..+..++.+.++++.. .+||.++..+.+.
T Consensus 182 avr~a~~~~~l~vDan~~~~~~~~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~ 251 (375)
T 1r0m_A 182 ATREAFPDIRLTVDANSAYTLADAGRLRQLDEYDLTYIE-------QP-LAWDDLVDHAELARRI--RTPLCLDESVASA 251 (375)
T ss_dssp HHHHHCTTSCEEEECTTCCCGGGHHHHHTTGGGCCSCEE-------CC-SCTTCSHHHHHHHHHC--SSCEEESTTCCSH
T ss_pred HHHHHcCCCeEEEeCCCCCCHHHHHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHHhC--CCCEEecCccCCH
Confidence 444443 455655532 12 2334445566766653 11 1123566777787766 7999999999999
Q ss_pred HHHHHHHHcC-CCEEEec
Q 017718 290 TDVFKALALG-ASGIFIG 306 (367)
Q Consensus 290 ~dv~kal~lG-Ad~V~ig 306 (367)
.|+.+++..| +|.|++-
T Consensus 252 ~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 252 SDARKALALGAGGVINLK 269 (375)
T ss_dssp HHHHHHHHHTSCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEEC
Confidence 9999999987 8999983
No 460
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=81.94 E-value=2.8 Score=36.57 Aligned_cols=70 Identities=11% Similarity=0.005 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCC---CCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHH-HHHHHHcCCCEEEech
Q 017718 233 AEDARIAVQAGAAGIIVSNHGAR---QLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTD-VFKALALGASGIFIGR 307 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~---~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~d-v~kal~lGAd~V~ig~ 307 (367)
.+.++.+.+.|+|.+-+.---|. ....+ .+.+.++++.+ +.|+.+.+.|.+..+ +..+..+|||.|.+..
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g---~~~i~~i~~~~--~~~~~v~l~v~d~~~~i~~~~~~gad~v~vh~ 92 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFG---ADVVASMRKHS--KLVFDCHLMVVDPERYVEAFAQAGADIMTIHT 92 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBC---HHHHHHHHTTC--CSEEEEEEESSSGGGGHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccC---HHHHHHHHHhC--CCCEEEEEeecCHHHHHHHHHHcCCCEEEEcc
Confidence 36688889999998655311111 11112 45566665544 679999999998864 6666679999999864
No 461
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=81.90 E-value=33 Score=31.89 Aligned_cols=180 Identities=16% Similarity=0.096 Sum_probs=97.4
Q ss_pred ceEeCcccc-hhccCChhhHHHHHHHHHcCCceee--c---CCCCCCHHHHH-------hh-CC-CceEEEEeecCCHHH
Q 017718 73 PIMIAPTAM-QKMAHPEGEYATARAASAAGTIMTL--S---SWSTSSVEEVA-------ST-GP-GIRFFQLYVYKDRNV 137 (367)
Q Consensus 73 Pi~iAPm~~-~~l~~~~~e~~~a~aa~~~G~~~~v--s---~~~~~~~e~i~-------~~-~~-~~~~~QLy~~~d~~~ 137 (367)
|.++.|+.- .+-.+.+.-..+.+-.-+.|+...+ | +..+.+.+|-. +. .. -|.+...- .+-+.
T Consensus 17 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~~ 94 (316)
T 3e96_A 17 GIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATST 94 (316)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHHH
Confidence 455677643 3333333334666667778876543 2 33556666522 22 22 45666663 37777
Q ss_pred HHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccccHHHH
Q 017718 138 VAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWL 217 (367)
Q Consensus 138 ~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 217 (367)
..++.+.|+++|++++.+. .|.. ++ | + ..++.+ .++.|
T Consensus 95 ai~la~~A~~~Gadavlv~--~P~y-~~----------~---s----------------~~~l~~----------~f~~v 132 (316)
T 3e96_A 95 AIELGNAAKAAGADAVMIH--MPIH-PY----------V---T----------------AGGVYA----------YFRDI 132 (316)
T ss_dssp HHHHHHHHHHHTCSEEEEC--CCCC-SC----------C---C----------------HHHHHH----------HHHHH
T ss_pred HHHHHHHHHhcCCCEEEEc--CCCC-CC----------C---C----------------HHHHHH----------HHHHH
Confidence 7788999999999999873 3432 00 0 0 001111 12467
Q ss_pred HhhcCCCEEEEec---CCHHHHHHHHHcC-CcEEEEcCCCCCCCCCccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHH
Q 017718 218 QTITKLPILVKGV---LTAEDARIAVQAG-AAGIIVSNHGARQLDYVPATIMALEEVVKATQG-RIPVFLDGGVRRGTDV 292 (367)
Q Consensus 218 ~~~~~~Pv~vK~v---~~~~~a~~~~~~G-~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv 292 (367)
.+.+++||++=.+ .+++...++.+.. +-+|--+ . ..+..+.++.+..++ ++.-+.+|.=. .-+
T Consensus 133 a~a~~lPiilYn~g~~l~~~~~~~La~~pnIvgiKds---------s-gd~~~~~~~~~~~~~~~f~~v~~G~d~--~~~ 200 (316)
T 3e96_A 133 IEALDFPSLVYFKDPEISDRVLVDLAPLQNLVGVKYA---------I-NDLPRFAKVVRSIPEEHQIAWICGTAE--KWA 200 (316)
T ss_dssp HHHHTSCEEEEECCTTSCTHHHHHHTTCTTEEEEEEC---------C-CCHHHHHHHHTTSCGGGCCEEEETTCT--TTH
T ss_pred HHhCCCCEEEEeCCCCCCHHHHHHHHcCCCEEEEEeC---------C-CCHHHHHHHHHhcCCCCceEEEeCChH--HHH
Confidence 6778999998763 5677777776543 1122211 1 133444455444432 34313344210 113
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
...+++||+++.-+..
T Consensus 201 ~~~l~~G~~G~is~~a 216 (316)
T 3e96_A 201 PFFWHAGAKGFTSGLV 216 (316)
T ss_dssp HHHHHHTCCEEEESGG
T ss_pred HHHHHCCCCEEEechh
Confidence 3467899999998874
No 462
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=81.62 E-value=10 Score=37.14 Aligned_cols=86 Identities=23% Similarity=0.238 Sum_probs=57.6
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCC--------CC-CCCCccc----hHHHHHHHHHHhc-------------
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHG--------AR-QLDYVPA----TIMALEEVVKATQ------------- 275 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~g--------g~-~~~~~~~----~~~~l~~i~~~~~------------- 275 (367)
+.|+.+=++.+.-.|+.+.++|.++|.+|+.+ +. ..|.+.- ..+.+.+|.+.+.
T Consensus 64 ~~~~~~~ga~d~~sA~~~~~aGf~Aiy~SG~~vAa~~~~s~~G~PD~~~~~~~ev~~~v~~I~~a~~~~d~~~~~~~~~~ 143 (429)
T 1f8m_A 64 LEWVNALGALTGNMAVQQVRAGLKAIYLSGWQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKIEGDTS 143 (429)
T ss_dssp SSCEEEEBCCSHHHHHHHHHTTCSCEEECHHHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred CCceecCCCCCHHHHHHHHHcCCCEEEechHHHhcccccccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 35787888899999999999999999998642 11 1233322 3344556655541
Q ss_pred --C-CCcEEEec--CCCCHHHHH----HHHHcCCCEEEech
Q 017718 276 --G-RIPVFLDG--GVRRGTDVF----KALALGASGIFIGR 307 (367)
Q Consensus 276 --~-~~~via~G--GI~~~~dv~----kal~lGAd~V~ig~ 307 (367)
+ .+|||+|+ |..+...+. +++.+||.+|.|=-
T Consensus 144 ~~d~~~PIiaD~DtGfG~~~nv~~tvk~~i~AGaaGi~IED 184 (429)
T 1f8m_A 144 VENWLAPIVADGEAGFGGALNVYELQKALIAAGVAGSHWED 184 (429)
T ss_dssp CSCSSCCEEEECTTTTSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cccCCCCEEEECCCCCCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 1 38999976 665655443 34558999998864
No 463
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=81.61 E-value=2.4 Score=39.16 Aligned_cols=89 Identities=19% Similarity=0.141 Sum_probs=51.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHH----HHHcCCCEEEechHHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFK----ALALGASGIFIGRPVVY 311 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~k----al~lGAd~V~ig~~~l~ 311 (367)
++.+.+. +|+|++.|+.|- ....+.-+- .++.+.+..++|||+--|=.+-.++++ +-.+|||++++-.|+.+
T Consensus 25 v~~li~~-v~gl~v~GttGE--~~~Ls~~Er-~~v~~~~~~rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 100 (283)
T 2pcq_A 25 AQALEPL-VDGLLVYGSNGE--GVHLTPEER-ARGLRALRPRKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYY 100 (283)
T ss_dssp HHHHGGG-SSCCEETCTTTT--GGGSCHHHH-HHHHHTCCCSSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTT
T ss_pred HHHHHhh-CCEEEECCcCcC--chhcCHHHH-HHHHHHHHhCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCC
Confidence 4556778 999999664432 112222222 233333323899887444444444443 33479999999999876
Q ss_pred HhhccChHHHHHHHHHHHH
Q 017718 312 SLAAEGEKGVRRVLEMLRE 330 (367)
Q Consensus 312 ~l~~~G~~~v~~~i~~l~~ 330 (367)
... .++++.++++.+.+
T Consensus 101 ~~~--~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 101 HGS--LGAGLLRYYEALAE 117 (283)
T ss_dssp GGG--TTTHHHHHHHHHHH
T ss_pred CCC--CHHHHHHHHHHHhc
Confidence 531 34566555555543
No 464
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=81.49 E-value=1.7 Score=43.34 Aligned_cols=65 Identities=18% Similarity=0.167 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+.+..+.++|+|.+++++.+|+. ...++.+..+++.. .+|++ .|+|.+.+++..++ |||+|.+|
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~----~~~L~~I~~l~~~~--~vpvi-~k~v~~~~~a~~l~--G~d~v~vg 294 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHN----LKAIKSMKEMRQKV--DADFI-VGNIANPKAVDDLT--FADAVKVG 294 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCC----HHHHHHHHHHHHTC--CSEEE-EEEECCHHHHTTCT--TSSEEEEC
T ss_pred HHHHHHHHHhcCCceEEEecCCcE----eehhhHHHHHHHHh--CCccc-cCCcCCHHHHHHhh--CCCeEEEe
Confidence 467888999999999997644431 12445566666654 78997 58898998876666 99999984
No 465
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=81.46 E-value=9 Score=35.10 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=57.2
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC----CCCCccchHHH-H---HHHHHHhcCCCcEEEecCCC---CHH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA-L---EEVVKATQGRIPVFLDGGVR---RGT 290 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~----~~~~~~~~~~~-l---~~i~~~~~~~~~via~GGI~---~~~ 290 (367)
+-|+++=..-+.-.|+.+.++|+|.|.+....+. ..|..+-+++- + +.+.+.. ...+|++|=+.. +++
T Consensus 16 g~~i~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~~~ 94 (264)
T 1m3u_A 16 KKRFATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLLADLPFMAYATPE 94 (264)
T ss_dssp TCCEEEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEEEECCTTSSSSHH
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEEEECCCCCcCCHH
Confidence 5689888888999999999999999998432221 12344444443 3 3344433 245788876665 787
Q ss_pred HHH----HHHHcCCCEEEe
Q 017718 291 DVF----KALALGASGIFI 305 (367)
Q Consensus 291 dv~----kal~lGAd~V~i 305 (367)
+++ +.+..||++|-|
T Consensus 95 ~a~~~a~rl~kaGa~aVkl 113 (264)
T 1m3u_A 95 QAFENAATVMRAGANMVKI 113 (264)
T ss_dssp HHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHHHHcCCCEEEE
Confidence 777 477799999988
No 466
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.45 E-value=10 Score=34.90 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=56.0
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCC----CCCCccchHHH-H---HHHHHHhcCCCcEEEecCC----CCH
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGAR----QLDYVPATIMA-L---EEVVKATQGRIPVFLDGGV----RRG 289 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~----~~~~~~~~~~~-l---~~i~~~~~~~~~via~GGI----~~~ 289 (367)
+-|+++=..-+.-.|+.+.++|+|.|.+....+. ..|..+-+++- + +.+.+.. ...+|++|=+. .++
T Consensus 16 g~~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vvaD~pfgsy~~s~ 94 (275)
T 1o66_A 16 GEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIVSDLPFGAYQQSK 94 (275)
T ss_dssp TCCEEEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEEEECCTTSSSSCH
T ss_pred CCcEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEEEECCCCCccCCH
Confidence 5689888888999999999999999976432221 12344444443 3 3344433 24578888555 367
Q ss_pred HHHH----HHHHcCCCEEEe
Q 017718 290 TDVF----KALALGASGIFI 305 (367)
Q Consensus 290 ~dv~----kal~lGAd~V~i 305 (367)
++++ +.+..||++|-|
T Consensus 95 ~~a~~na~rl~kaGa~aVkl 114 (275)
T 1o66_A 95 EQAFAAAAELMAAGAHMVKL 114 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEE
Confidence 7777 477799999988
No 467
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=81.40 E-value=15 Score=35.01 Aligned_cols=84 Identities=26% Similarity=0.329 Sum_probs=0.0
Q ss_pred CHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCC-CCHHHHHHHHHcCCCEEEechHHH
Q 017718 232 TAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGV-RRGTDVFKALALGASGIFIGRPVV 310 (367)
Q Consensus 232 ~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI-~~~~dv~kal~lGAd~V~ig~~~l 310 (367)
+.+.+..+.++|+|.|.++- ......+.+++|++.. .+|+++| | .++.-+++++..|+|.+=|----+
T Consensus 48 tv~Qi~~l~~aG~diVRvav-------p~~~~a~al~~I~~~~--~vPlvaD--iHf~~~lal~a~e~G~dklRINPGNi 116 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAV-------PHKEDVEALEEIVKKS--PMPVIAD--IHFAPSYAFLSMEKGVHGIRINPGNI 116 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-------CSHHHHHHHHHHHHHC--SSCEEEE--CCSCHHHHHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCC-------CChHHHHHHHHHHhcC--CCCEEEe--CCCCHHHHHHHHHhCCCeEEECCccc
Q ss_pred HHhhccChHHHHHHHHHHHHH
Q 017718 311 YSLAAEGEKGVRRVLEMLREE 331 (367)
Q Consensus 311 ~~l~~~G~~~v~~~i~~l~~e 331 (367)
++.+.+..+++..++.
T Consensus 117 -----g~~~~~~~vv~~ak~~ 132 (366)
T 3noy_A 117 -----GKEEIVREIVEEAKRR 132 (366)
T ss_dssp -----SCHHHHHHHHHHHHHH
T ss_pred -----CchhHHHHHHHHHHHc
No 468
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=81.32 E-value=4.7 Score=38.60 Aligned_cols=42 Identities=24% Similarity=0.341 Sum_probs=35.7
Q ss_pred chHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 262 ATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 262 ~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.+++.+..+++.. ++||++-| +.+.+|+.++..+|||+|.+.
T Consensus 204 ~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 204 FCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMKHNVQGIVVS 245 (352)
T ss_dssp CCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHHcCCCEEEEe
Confidence 4678888888876 78998854 789999999999999999984
No 469
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=80.86 E-value=15 Score=35.22 Aligned_cols=119 Identities=15% Similarity=0.065 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCccccccccccccCccccccchhhHHHhhhccCccc
Q 017718 133 KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSL 212 (367)
Q Consensus 133 ~d~~~~~~~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 212 (367)
.+++.+.+.++++.+.|++++=+.+++.. +.|+.
T Consensus 141 ~~~e~~~~~a~~~~~~G~~~~KiKvG~~~----~~d~~------------------------------------------ 174 (391)
T 3gd6_A 141 EEVESNLDVVRQKLEQGFDVFRLYVGKNL----DADEE------------------------------------------ 174 (391)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCH----HHHHH------------------------------------------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeCCCH----HHHHH------------------------------------------
Confidence 45677777777777889999877665310 00000
Q ss_pred cHHHHHhhc--CCCEE-EEec--CCHHHH----HHHHHcCC--cEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEE
Q 017718 213 SWKWLQTIT--KLPIL-VKGV--LTAEDA----RIAVQAGA--AGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVF 281 (367)
Q Consensus 213 ~~~~l~~~~--~~Pv~-vK~v--~~~~~a----~~~~~~G~--d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~vi 281 (367)
..+.+|+.+ ++++. +..- .+.++| +.+.+.|+ +.|- + ...+..++.+.++++.+ .+||
T Consensus 175 ~v~avR~a~g~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iE-------q-P~~~~d~~~~~~l~~~~--~iPI- 243 (391)
T 3gd6_A 175 FLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------S-PAPRNDFDGLYQLRLKT--DYPI- 243 (391)
T ss_dssp HHHHHHHHHGGGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------C-CSCTTCHHHHHHHHHHC--SSCE-
T ss_pred HHHHHHHHcCCCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceec-------C-CCChhhHHHHHHHHHHc--CCCc-
Confidence 122566665 46777 6543 355554 45666777 6553 1 11223577888888776 7998
Q ss_pred EecCCCCHHHHHHHHHcC-CCEEEechHH
Q 017718 282 LDGGVRRGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 282 a~GGI~~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+..+.+..|+.+++..| +|.|++--..
T Consensus 244 -dE~~~~~~~~~~~~~~~~~d~v~~k~~~ 271 (391)
T 3gd6_A 244 -SEHVWSFKQQQEMIKKDAIDIFNISPVF 271 (391)
T ss_dssp -EEECCCHHHHHHHHHHTCCSEEEECHHH
T ss_pred -CCCCCCHHHHHHHHHcCCCCEEEECchh
Confidence 88999999999999987 7999988644
No 470
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=80.78 E-value=7.5 Score=37.04 Aligned_cols=60 Identities=7% Similarity=0.052 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEe
Q 017718 233 AEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFI 305 (367)
Q Consensus 233 ~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~i 305 (367)
.+.++.+.+.|+|.|.+ |+|. +..+.+.++++ . .++|+. .+.+.+++.++...|+|+|.+
T Consensus 112 ~~~~~~~~~~g~~~V~~--~~g~------~~~~~i~~~~~-~--g~~v~~--~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSF--HFGV------PDREVIARLRR-A--GTLTLV--TATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEE--ESSC------CCHHHHHHHHH-T--TCEEEE--EESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE--eCCC------CcHHHHHHHHH-C--CCeEEE--ECCCHHHHHHHHHcCCCEEEE
Confidence 45688899999999988 3331 23456666554 2 567776 478999999999999999998
No 471
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=80.74 E-value=4.2 Score=39.14 Aligned_cols=88 Identities=15% Similarity=0.167 Sum_probs=55.9
Q ss_pred HHhhc-CCCEEEEec-------CCHHHHHHHH-HcCCcEEEEcCCCCC---CCCC----ccchHHHHHHHHHHhcCCCcE
Q 017718 217 LQTIT-KLPILVKGV-------LTAEDARIAV-QAGAAGIIVSNHGAR---QLDY----VPATIMALEEVVKATQGRIPV 280 (367)
Q Consensus 217 l~~~~-~~Pv~vK~v-------~~~~~a~~~~-~~G~d~i~vs~~gg~---~~~~----~~~~~~~l~~i~~~~~~~~~v 280 (367)
+|+.. +.|++.-.. .+.+.++.+. ..+++++.++-.... +..+ ....++.|.++++.+ ++||
T Consensus 113 vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~--~vPV 190 (368)
T 3vkj_A 113 VRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKEL--SVPI 190 (368)
T ss_dssp HHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTC--SSCE
T ss_pred HHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHc--CCCE
Confidence 55433 567765332 2456766544 467888887521110 0011 112567777777665 7999
Q ss_pred EEe--cCCCCHHHHHHHHHcCCCEEEec
Q 017718 281 FLD--GGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 281 ia~--GGI~~~~dv~kal~lGAd~V~ig 306 (367)
++- |+-.+++++.++..+|||+|.++
T Consensus 191 ivK~vG~g~s~~~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 191 IVKESGNGISMETAKLLYSYGIKNFDTS 218 (368)
T ss_dssp EEECSSSCCCHHHHHHHHHTTCCEEECC
T ss_pred EEEeCCCCCCHHHHHHHHhCCCCEEEEe
Confidence 995 65578999999999999999983
No 472
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=80.61 E-value=8.7 Score=35.37 Aligned_cols=79 Identities=30% Similarity=0.343 Sum_probs=53.8
Q ss_pred EEEEecCCHHHHHHHHHcCCcEEEEcCCC-C-C--CCCCccchHH----HHHHHHHHhcCCCcEEEec--CCC-CHHHHH
Q 017718 225 ILVKGVLTAEDARIAVQAGAAGIIVSNHG-A-R--QLDYVPATIM----ALEEVVKATQGRIPVFLDG--GVR-RGTDVF 293 (367)
Q Consensus 225 v~vK~v~~~~~a~~~~~~G~d~i~vs~~g-g-~--~~~~~~~~~~----~l~~i~~~~~~~~~via~G--GI~-~~~dv~ 293 (367)
+++=++-+.-.|+.+.++|+|+|.+++.+ + . ..|.++-+++ .+..|.+.+ ++||++|. |.. +++++.
T Consensus 18 i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~--~~pviaD~d~Gyg~~~~~~~ 95 (275)
T 2ze3_A 18 FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV--AIPVNADIEAGYGHAPEDVR 95 (275)
T ss_dssp EEECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC--SSCEEEECTTCSSSSHHHHH
T ss_pred eeEecccCHHHHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc--CCCEEeecCCCCCCCHHHHH
Confidence 77767788999999999999999998521 0 0 1344444443 345555555 68999977 443 455544
Q ss_pred ----HHHHcCCCEEEe
Q 017718 294 ----KALALGASGIFI 305 (367)
Q Consensus 294 ----kal~lGAd~V~i 305 (367)
+.+..||.+|.|
T Consensus 96 ~~v~~l~~aGaagv~i 111 (275)
T 2ze3_A 96 RTVEHFAALGVAGVNL 111 (275)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCcEEEE
Confidence 455689999987
No 473
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=80.47 E-value=5.2 Score=36.98 Aligned_cols=89 Identities=18% Similarity=0.336 Sum_probs=50.1
Q ss_pred hcCCCEEEEecC--CHHH----HHHHHHcCCcEEEEcCCCCCCCCCcc--chHHHHHHHHHHhcCCCcEEEe--------
Q 017718 220 ITKLPILVKGVL--TAED----ARIAVQAGAAGIIVSNHGARQLDYVP--ATIMALEEVVKATQGRIPVFLD-------- 283 (367)
Q Consensus 220 ~~~~Pv~vK~v~--~~~~----a~~~~~~G~d~i~vs~~gg~~~~~~~--~~~~~l~~i~~~~~~~~~via~-------- 283 (367)
.+++||++|..+ ++++ +..+...|-+-+++--.|++ ..... ..+..++.+++.. ..+||+.|
T Consensus 127 ~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~-~~~~~~~~dl~~i~~lk~~~-~~~pV~~D~sH~~q~~ 204 (280)
T 2qkf_A 127 KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSS-FGYDNLVVDMLGFGVMKQTC-GNLPVIFDVTHSLQTR 204 (280)
T ss_dssp HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEE-CSTTCEECCTTHHHHHHHHT-TTCCEEEEHHHHCC--
T ss_pred cCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCC-CCCCccccCHHHHHHHHHhC-CCCCEEEECCCCcccc
Confidence 468999999985 4544 44556788765655433432 21111 2444566665543 14799996
Q ss_pred ---cCCCCH-----HH-HHHHHHcCCCEEEechHHH
Q 017718 284 ---GGVRRG-----TD-VFKALALGASGIFIGRPVV 310 (367)
Q Consensus 284 ---GGI~~~-----~d-v~kal~lGAd~V~ig~~~l 310 (367)
||-..+ .. +..+.++||++++|=+-+-
T Consensus 205 ~~~~~~s~g~~~~~~~~a~aava~Ga~G~~IE~H~~ 240 (280)
T 2qkf_A 205 DAGSAASGGRRAQALDLALAGMATRLAGLFLESHPD 240 (280)
T ss_dssp --------CHHHHHHHHHHHHHTTCCSEEEEEC---
T ss_pred CccccccCCchhhHHHHHHHHHHcCCCEEEEeecCC
Confidence 333344 23 3355668999999998764
No 474
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.06 E-value=14 Score=32.34 Aligned_cols=78 Identities=14% Similarity=-0.077 Sum_probs=48.8
Q ss_pred EEEec--CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCE
Q 017718 226 LVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASG 302 (367)
Q Consensus 226 ~vK~v--~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~-lGAd~ 302 (367)
.+|++ .+.++|+.+.++|+|+|-+--.... ...-+.+...++.+.++..+..++.===.+.+.+.+... +|.|.
T Consensus 2 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 78 (203)
T 1v5x_A 2 RVKICGITRLEDALLAEALGAFALGFVLAPGS---RRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEARLQV 78 (203)
T ss_dssp EEEECCCCCHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHTTCSE
T ss_pred cEEEcCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 36776 7899999999999999876422111 111234556667666654333332211125777777665 79999
Q ss_pred EEec
Q 017718 303 IFIG 306 (367)
Q Consensus 303 V~ig 306 (367)
||+-
T Consensus 79 vQLH 82 (203)
T 1v5x_A 79 AQLH 82 (203)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 475
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=79.69 E-value=4.2 Score=35.56 Aligned_cols=66 Identities=24% Similarity=0.297 Sum_probs=40.3
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCc--cchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYV--PATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~--~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
+.++.+.+.|+|.|.+....+.....+ ......++++.+.. .++|+.+. ++..++.+|||+|.+|.
T Consensus 35 ~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~v~v~~------~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 35 TVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREA--GVPFIVND------DVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHH--TCCEEEES------CHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHc--CCeEEEcC------HHHHHHHcCCCEEEECC
Confidence 578999999999998854222111111 11122233333322 68888862 45567789999999985
No 476
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=79.43 E-value=14 Score=32.34 Aligned_cols=78 Identities=10% Similarity=-0.066 Sum_probs=48.7
Q ss_pred EEEec--CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHH-cCCCE
Q 017718 226 LVKGV--LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALA-LGASG 302 (367)
Q Consensus 226 ~vK~v--~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~-lGAd~ 302 (367)
.+|++ .+.++++.+.++|+|+|-+--.... ...-+.+...++.+.++..+..++.===.+.+.+.+... +|.|.
T Consensus 3 ~vKICGit~~eda~~a~~~GaD~iGfif~~~S---pR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~ld~ 79 (205)
T 1nsj_A 3 RVKICGITNLEDALFSVESGADAVGFVFYPKS---KRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQLNA 79 (205)
T ss_dssp EEEECCCCSHHHHHHHHHHTCSEEEEECCTTC---TTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHTCSE
T ss_pred cEEECCCCcHHHHHHHHHcCCCEEEEEecCCC---CCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhCCCE
Confidence 36776 7899999999999999876422111 111234556667666653333332211135677777665 79999
Q ss_pred EEec
Q 017718 303 IFIG 306 (367)
Q Consensus 303 V~ig 306 (367)
||+-
T Consensus 80 vQLH 83 (205)
T 1nsj_A 80 VQLH 83 (205)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9984
No 477
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=79.37 E-value=6.4 Score=37.23 Aligned_cols=81 Identities=25% Similarity=0.315 Sum_probs=55.8
Q ss_pred hhcCCCEEEEecCCHHHHHHHHHcCCcEEEEcC--------CCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHH
Q 017718 219 TITKLPILVKGVLTAEDARIAVQAGAAGIIVSN--------HGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGT 290 (367)
Q Consensus 219 ~~~~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~--------~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~ 290 (367)
+..+.-+|+ .+...+.|+.+.++||++|.+-+ .||. ......+.+.+|++++ ++||++==-|..-.
T Consensus 14 ~~~kgGvI~-d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~---arm~~p~~i~~I~~av--~iPV~~K~rig~~~ 87 (330)
T 2yzr_A 14 KMVKHGVVM-DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGV---ARMSDPALIEEIMDAV--SIPVMAKCRIGHTT 87 (330)
T ss_dssp HTTTTSEEE-EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCC---CCCCCHHHHHHHHHHC--SSCEEEEEETTCHH
T ss_pred HHccCCcee-eCCHHHHHHHHHHcCCCEEEecCCccccccCCcch---hhcCCHHHHHHHHHhc--CCCeEEEEeecchH
Confidence 445667877 78889999999999999996542 1121 1245777888888888 89999865553333
Q ss_pred HHHHHHHcCCCEEEe
Q 017718 291 DVFKALALGASGIFI 305 (367)
Q Consensus 291 dv~kal~lGAd~V~i 305 (367)
.+.-.-++|||++-.
T Consensus 88 e~qilea~GaD~Id~ 102 (330)
T 2yzr_A 88 EALVLEAIGVDMIDE 102 (330)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEeh
Confidence 333333499999864
No 478
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=79.27 E-value=7.3 Score=35.80 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.5
Q ss_pred HHHhhcCCCEEEEec-CCHHHHHHHHHcCCcEEEE
Q 017718 216 WLQTITKLPILVKGV-LTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v-~~~~~a~~~~~~G~d~i~v 249 (367)
.+++.+++||+.-+. .+.+++..+.++|||++.+
T Consensus 235 ~i~~~~~ipvia~GGI~~~~d~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 235 QVAQDVDIPIIGMGGVANAQDVLEMYMAGASAVAV 269 (311)
T ss_dssp HHHTTCSSCEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 677777999988764 5899999999999999998
No 479
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=79.10 E-value=17 Score=34.76 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=57.0
Q ss_pred HHHhhc-CCCEEEEec--CCH----HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC
Q 017718 216 WLQTIT-KLPILVKGV--LTA----EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR 288 (367)
Q Consensus 216 ~l~~~~-~~Pv~vK~v--~~~----~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~ 288 (367)
.+|+.+ ++++.+..- -+. +-++.+.+.|++.|-= ...+..++.+.++++.. .+||.++.-+.+
T Consensus 185 avR~a~~~~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEq--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~ 254 (385)
T 3i6e_A 185 LIARDFPEFRVRVDYNQGLEIDEAVPRVLDVAQFQPDFIEQ--------PVRAHHFELMARLRGLT--DVPLLADESVYG 254 (385)
T ss_dssp HHHHHCTTSEEEEECTTCCCGGGHHHHHHHHHTTCCSCEEC--------CSCTTCHHHHHHHHTTC--SSCEEESTTCCS
T ss_pred HHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--------CCCcccHHHHHHHHHhC--CCCEEEeCCcCC
Confidence 566655 466777643 233 3356677777776641 11223567777776655 799999999999
Q ss_pred HHHHHHHHHcC-CCEEEechH
Q 017718 289 GTDVFKALALG-ASGIFIGRP 308 (367)
Q Consensus 289 ~~dv~kal~lG-Ad~V~ig~~ 308 (367)
..|+.+++..| +|.|++--.
T Consensus 255 ~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 255 PEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp HHHHHHHHHHTCCSEEEECHH
T ss_pred HHHHHHHHHcCCCCEEEeccc
Confidence 99999999976 799988643
No 480
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=78.93 E-value=5.9 Score=37.76 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=28.7
Q ss_pred HHHhhc--CCCEEEEe-cCCHHHHHHHHHcCCcEEEE
Q 017718 216 WLQTIT--KLPILVKG-VLTAEDARIAVQAGAAGIIV 249 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~-v~~~~~a~~~~~~G~d~i~v 249 (367)
.+++.+ ++||+.-+ +.+.++|..+..+|||+|.+
T Consensus 267 ~i~~~~~~~ipIIg~GGI~s~~da~~~l~aGAd~V~i 303 (345)
T 3oix_A 267 AFYKRLNPSIQIIGTGGVXTGRDAFEHILCGASMVQI 303 (345)
T ss_dssp HHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHcCCCCcEEEECCCCChHHHHHHHHhCCCEEEE
Confidence 677777 68987654 58899999999999999988
No 481
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=78.87 E-value=3.5 Score=37.60 Aligned_cols=77 Identities=22% Similarity=0.297 Sum_probs=46.2
Q ss_pred HcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC-HHHHHHHHHcCCC----E--EEechHHHHHh
Q 017718 241 QAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR-GTDVFKALALGAS----G--IFIGRPVVYSL 313 (367)
Q Consensus 241 ~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~-~~dv~kal~lGAd----~--V~ig~~~l~~l 313 (367)
++|.+|++++.+ ..+.+..+++.+++ .+++ .=||+- +.+...++..|+| . +.+|||++.+
T Consensus 168 ~~g~~GvV~~at----------~~~e~~~ir~~~~~-~~~l-~PGIg~qg~tp~~a~~~G~d~~~~~~livvGR~I~~A- 234 (255)
T 3qw3_A 168 VNGNVGLVVGAT----------DPVALARVRARAPT-LWFL-VPGIGAQGGSLKASLDAGLRADGSGMLINVSRGLARA- 234 (255)
T ss_dssp GGSCEEEEECSS----------CHHHHHHHHHHCSS-CCEE-ECCC-----CHHHHHHHHCCTTSCCEEEEESHHHHTS-
T ss_pred hhCCeEEEECCC----------CHHHHHHHHHHCCC-CeEE-ECCcCCCCCCHHHHHHcCCCcccCeeEEEeChhhcCC-
Confidence 489999998531 12345566666653 3454 445542 3356667778999 4 8999999874
Q ss_pred hccChHHHHHHHHHHHHHHHHH
Q 017718 314 AAEGEKGVRRVLEMLREEFELA 335 (367)
Q Consensus 314 ~~~G~~~v~~~i~~l~~el~~~ 335 (367)
..+ ....+.+++|+...
T Consensus 235 --~dp---~~aa~~i~~~i~~~ 251 (255)
T 3qw3_A 235 --ADP---RAAAKELCEEINAI 251 (255)
T ss_dssp --SCH---HHHHHHHHHHHHHH
T ss_pred --CCH---HHHHHHHHHHHHHH
Confidence 222 34556666776654
No 482
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=78.85 E-value=4.9 Score=37.64 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=45.2
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEe---cCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 236 ARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLD---GGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 236 a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~---GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
++...++|||+|.+ +| +.+.+.+.++.+.++ .+|+.++ +|-...-.+.+.-.+|.+.|..+...+.+
T Consensus 176 a~ay~eAGAD~ifi--~g-------~~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~lGv~~v~~~~~~~ra 245 (302)
T 3fa4_A 176 LRAARDAGADVGFL--EG-------ITSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGP 245 (302)
T ss_dssp HHHHHTTTCSEEEE--TT-------CCCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHH
T ss_pred HHHHHHcCCCEEee--cC-------CCCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHHcCCCEEEEchHHHHH
Confidence 56778999999998 33 345667778887773 4787663 33221223444556899999999877654
No 483
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=78.73 E-value=3.7 Score=37.71 Aligned_cols=36 Identities=14% Similarity=0.227 Sum_probs=29.9
Q ss_pred HHHHh-hcC-CCEEEEec-CCHHHHHHHHHcCCcEEEEc
Q 017718 215 KWLQT-ITK-LPILVKGV-LTAEDARIAVQAGAAGIIVS 250 (367)
Q Consensus 215 ~~l~~-~~~-~Pv~vK~v-~~~~~a~~~~~~G~d~i~vs 250 (367)
+.+++ ..+ +||++-+. .++++|..+.+.|+|++.|.
T Consensus 169 ~~i~~~~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 169 ELFAREKASLPPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp HHHHHTTTTSSCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred HHHHHhcCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 46666 557 99988764 78999999999999999983
No 484
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=78.67 E-value=4.1 Score=37.71 Aligned_cols=91 Identities=21% Similarity=0.253 Sum_probs=58.5
Q ss_pred HHHhhc--CCCEEEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCC----------ccc---hHHHHHHHHHHhcCCCcE
Q 017718 216 WLQTIT--KLPILVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDY----------VPA---TIMALEEVVKATQGRIPV 280 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~----------~~~---~~~~l~~i~~~~~~~~~v 280 (367)
.+++.. +.||+--+..+.-.|+.+.+.|+|.|++-|.|.....+ +-+ ..+.-.++...+ .++||
T Consensus 19 ~l~~~i~~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v-~~iPV 97 (286)
T 2p10_A 19 RFQKKIRAGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVV-RHTPV 97 (286)
T ss_dssp HHHHHHHTTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGC-SSSCE
T ss_pred HHHHHHhcCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccC-CCCCE
Confidence 444433 68999888899999999999999999998865432221 111 222223333333 27999
Q ss_pred EEe-cCC---CCHHHHHHHHH-cCCCEEEechH
Q 017718 281 FLD-GGV---RRGTDVFKALA-LGASGIFIGRP 308 (367)
Q Consensus 281 ia~-GGI---~~~~dv~kal~-lGAd~V~ig~~ 308 (367)
++- .+. ++-..+++.|. +|+.+| +=-|
T Consensus 98 ~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~p 129 (286)
T 2p10_A 98 LAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFP 129 (286)
T ss_dssp EEEECTTCTTCCHHHHHHHHHHHTCCEE-EECS
T ss_pred EEEECCcCCCcCHHHHHHHHHHhCCceE-EECC
Confidence 982 111 34556667776 899999 5554
No 485
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=78.45 E-value=40 Score=30.81 Aligned_cols=173 Identities=15% Similarity=0.136 Sum_probs=96.5
Q ss_pred ceEeCcccchhccCChhhHHHHHHHHHcCCceee--cC---CCCCCHHHHH-------hhCCCceEEEEeecCCHHHHHH
Q 017718 73 PIMIAPTAMQKMAHPEGEYATARAASAAGTIMTL--SS---WSTSSVEEVA-------STGPGIRFFQLYVYKDRNVVAQ 140 (367)
Q Consensus 73 Pi~iAPm~~~~l~~~~~e~~~a~aa~~~G~~~~v--s~---~~~~~~e~i~-------~~~~~~~~~QLy~~~d~~~~~~ 140 (367)
|.++.|+.-.+-.+.+.-..+.+-.-+.|+...+ || ..+.+.||-. +...+ .+...- ..+-+...+
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~ 82 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVME 82 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHH
Confidence 4456676433323333334666666678876443 33 3456766532 12223 444443 345666778
Q ss_pred HHHHHHHcCCcEEEEecCCCCCCchhHHhhhhcCCCCcccc-ccccccccCccccccchhhHHHhhhccCccccHHHHHh
Q 017718 141 LVRRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTL-KNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKWLQT 219 (367)
Q Consensus 141 ~l~ra~~~G~~ai~itvd~p~~g~r~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 219 (367)
+.+.|+++|++++.+. .|.. .. .+ ..++.+ .++.+.+
T Consensus 83 la~~A~~~Gadavlv~--~P~y-----------------~~~~s-------------~~~l~~----------~f~~va~ 120 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSH--SPYY-----------------FPRLP-------------EKFLAK----------YYEEIAR 120 (288)
T ss_dssp HHHHHHTSCCSEEEEC--CCCS-----------------SCSCC-------------HHHHHH----------HHHHHHH
T ss_pred HHHHHHhcCCCEEEEc--CCcC-----------------CCCCC-------------HHHHHH----------HHHHHHH
Confidence 8999999999999873 3331 10 00 001111 2346667
Q ss_pred hcCCCEEEEec-------CCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCCHHHH
Q 017718 220 ITKLPILVKGV-------LTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDV 292 (367)
Q Consensus 220 ~~~~Pv~vK~v-------~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~~~dv 292 (367)
.+++||++=.+ .+++...++ .+-+|--+. ..+..+.++.+ .++++.|+ +| +..-.
T Consensus 121 a~~lPiilYn~P~~tg~~l~~~~~~~L---nIvgiKdss----------gd~~~~~~~~~-~~~~f~v~-~G---~d~~~ 182 (288)
T 2nuw_A 121 ISSHSLYIYNYPAATGYDIPPSILKSL---PVKGIKDTN----------QDLAHSLEYKL-NLPGVKVY-NG---SNTLI 182 (288)
T ss_dssp HCCSCEEEEECHHHHSCCCCHHHHTTT---TEEEEEECC----------SCHHHHHHHHH-HSTTCEEE-EC---CGGGH
T ss_pred hcCCCEEEEECchHhCcCCCHHHHhcc---EEEEEEeCC----------CCHHHHHHHHh-cCCCeEEE-EC---cHHHH
Confidence 78999998775 456666555 333443321 12444455555 55566654 45 23457
Q ss_pred HHHHHcCCCEEEechH
Q 017718 293 FKALALGASGIFIGRP 308 (367)
Q Consensus 293 ~kal~lGAd~V~ig~~ 308 (367)
+.++.+ |+++.-+..
T Consensus 183 ~~~l~~-~~G~is~~a 197 (288)
T 2nuw_A 183 YYSLLS-LDGVVASFT 197 (288)
T ss_dssp HHHHTT-SSEEECGGG
T ss_pred HHHHHH-hCEEEecHH
Confidence 778888 999988874
No 486
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=78.33 E-value=36 Score=32.45 Aligned_cols=84 Identities=18% Similarity=0.083 Sum_probs=57.2
Q ss_pred HHHhhc--CCCEEEEec--CCHHHH----HHHHH--cCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecC
Q 017718 216 WLQTIT--KLPILVKGV--LTAEDA----RIAVQ--AGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGG 285 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~--~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GG 285 (367)
.+|+.+ ++++.+.-- -+.++| +.+.+ .++..|- + ...+..++.+.++++.. .+||.++.-
T Consensus 178 avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iE-------e-P~~~~d~~~~~~l~~~~--~iPIa~dE~ 247 (379)
T 3r0u_A 178 ALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIE-------Q-PVKYYDIKAMAEITKFS--NIPVVADES 247 (379)
T ss_dssp HHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEE-------C-CSCTTCHHHHHHHHHHC--SSCEEESTT
T ss_pred HHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEE-------C-CCCcccHHHHHHHHhcC--CCCEEeCCc
Confidence 677766 367777643 355554 44455 4444442 1 11223567788888776 799999999
Q ss_pred CCCHHHHHHHHHcC-CCEEEechHH
Q 017718 286 VRRGTDVFKALALG-ASGIFIGRPV 309 (367)
Q Consensus 286 I~~~~dv~kal~lG-Ad~V~ig~~~ 309 (367)
+.+..|+.+++..| +|.|++--..
T Consensus 248 ~~~~~~~~~~i~~~a~d~v~~k~~~ 272 (379)
T 3r0u_A 248 VFDAKDAERVIDEQACNMINIKLAK 272 (379)
T ss_dssp CSSHHHHHHHHHTTCCSEEEECHHH
T ss_pred cCCHHHHHHHHHcCCCCEEEECccc
Confidence 99999999999987 7999886433
No 487
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=78.12 E-value=3.8 Score=38.08 Aligned_cols=69 Identities=22% Similarity=0.292 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEE-ecCCCCHHHHHHHHHcCCCEEEechHHHHH
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFL-DGGVRRGTDVFKALALGASGIFIGRPVVYS 312 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via-~GGI~~~~dv~kal~lGAd~V~ig~~~l~~ 312 (367)
+.|+...++|||.|.+-+ +++.+.+.++.+.+ ++|++. .+|-...-++.+.-.+|.+.|..|...+.+
T Consensus 172 ~Ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~lGv~~v~~~~~~~ra 240 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVG---------VRDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLARLGVRVVVNGHAAYFA 240 (287)
T ss_dssp HHHHHHHHTTCSEEEEEC---------CCSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHHTTEEEEECCCHHHHH
T ss_pred HHHHHHHHcCCCEEEecC---------CCCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHHcCCcEEEEChHHHHH
Confidence 557889999999999832 45667778887777 688884 233332234455667999999999877765
Q ss_pred h
Q 017718 313 L 313 (367)
Q Consensus 313 l 313 (367)
.
T Consensus 241 a 241 (287)
T 3b8i_A 241 A 241 (287)
T ss_dssp H
T ss_pred H
Confidence 3
No 488
>3tkf_A Transaldolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel/TIM barrel; HET: I22 EPE; 1.50A {Francisella tularensis subsp} PDB: 3te9_A* 3upb_A* 3tk7_A* 3tno_A* 4e0c_A 3igx_A
Probab=77.89 E-value=8.5 Score=36.65 Aligned_cols=91 Identities=11% Similarity=0.088 Sum_probs=61.3
Q ss_pred CCCEEEEecCCHHHHHHHHHcCCcEEEEcC-----C-----CCCCCC--CccchHHHHHHHHH---HhcCCCcEEEecCC
Q 017718 222 KLPILVKGVLTAEDARIAVQAGAAGIIVSN-----H-----GARQLD--YVPATIMALEEVVK---ATQGRIPVFLDGGV 286 (367)
Q Consensus 222 ~~Pv~vK~v~~~~~a~~~~~~G~d~i~vs~-----~-----gg~~~~--~~~~~~~~l~~i~~---~~~~~~~via~GGI 286 (367)
++++-+-.+.+...+..+.++|+..|...- + |..... ...+....+.++.+ ..+.+..|++ -.+
T Consensus 177 GI~vN~TliFS~~Qa~~aAeAGa~~ISPFVGRidD~~~~~~~~~~~~~~~~~~Gv~~v~~i~~~yk~~g~~T~Vl~-ASf 255 (345)
T 3tkf_A 177 GINCNLTLIFDKAQAKACAEAGVYLVSPFVGRITDWQMQQNNLKTFPAIADDDGVNSVKAIYKLYKSHGFKTIVMG-ASF 255 (345)
T ss_dssp TCCEEEEEECCHHHHHHHHHTTCSEEEEBSHHHHHHHHHHTTCSSCCCGGGCHHHHHHHHHHHHHHHHTCCSEEEE-BCC
T ss_pred CCcEEEEEeCCHHHHHHHHHcCCcEEEeecchHHHHhhhccccccccccccCCHHHHHHHHHHHHHHcCCCCEEEe-CCC
Confidence 899999999999999999999999987631 0 111110 00123444444444 3333455555 559
Q ss_pred CCHHHHHHHHHcCCCEEEechHHHHHhhc
Q 017718 287 RRGTDVFKALALGASGIFIGRPVVYSLAA 315 (367)
Q Consensus 287 ~~~~dv~kal~lGAd~V~ig~~~l~~l~~ 315 (367)
|+..++.. .+|||.+-|.-.++..+..
T Consensus 256 Rn~~~V~a--LaG~d~vTipp~lL~~L~~ 282 (345)
T 3tkf_A 256 RNVEQVIA--LAGCDALTISPVLLEELKN 282 (345)
T ss_dssp SSHHHHHT--TTTSSEEEECHHHHHHHHT
T ss_pred CCHHHHHH--HhCCCEEECCHHHHHHHHh
Confidence 99999994 4699999998888776653
No 489
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=77.37 E-value=7.1 Score=35.57 Aligned_cols=75 Identities=23% Similarity=0.316 Sum_probs=46.1
Q ss_pred EEEecCCHHHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhc-CCCcEEE-ecCCCCHHHHHHHHHcCCCEE
Q 017718 226 LVKGVLTAEDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFL-DGGVRRGTDVFKALALGASGI 303 (367)
Q Consensus 226 ~vK~v~~~~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~~~via-~GGI~~~~dv~kal~lGAd~V 303 (367)
+++.+.+++.++++...|+|+|++.. ..++...+.+........ ...++++ .-+. +..|+.+++..|+++|
T Consensus 20 ~~~~~~~p~~~e~a~~~g~D~vilDl------Ehav~~~~k~~~~l~a~~~~~~~~~VRVn~~-~~~di~~~ld~G~~gI 92 (261)
T 3qz6_A 20 MLNLVYNPDIVRIYAEAGLDYFIVDC------EHAAYTFREINHLVSVAKNAGVSVLVRIPQV-DRAHVQRLLDIGAEGF 92 (261)
T ss_dssp EESSCCCTTHHHHHHHTTCSEEEEES------SSSCCCHHHHHHHHHHHHHHTCEEEEECSSC-CHHHHHHHHHHTCCEE
T ss_pred EEecCCCHHHHHHHhcCCcCEEEEec------cCCCCCHHHHHHHHHHHhhcCCeEEEEeCCC-CHHHHHHHHhcCCCEE
Confidence 34443678889999999999999975 222222222222222211 1344444 2333 4579999999999999
Q ss_pred Eech
Q 017718 304 FIGR 307 (367)
Q Consensus 304 ~ig~ 307 (367)
++-.
T Consensus 93 ~lP~ 96 (261)
T 3qz6_A 93 MIPG 96 (261)
T ss_dssp EETT
T ss_pred EECC
Confidence 9864
No 490
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=76.97 E-value=8.8 Score=35.77 Aligned_cols=69 Identities=19% Similarity=0.110 Sum_probs=43.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCCCccchHHHH-------HHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEech
Q 017718 235 DARIAVQAGAAGIIVSNHGARQLDYVPATIMAL-------EEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGR 307 (367)
Q Consensus 235 ~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l-------~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig~ 307 (367)
.|+...+.|||.|.|.+.+.+-.....+..+.+ ..+.+.. ++||..|. .+++-+.+++..||+.+-=-+
T Consensus 68 ~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--~vpiSIDT--~~~~V~~aAl~aGa~iINdvs 143 (297)
T 1tx2_A 68 HAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLPISIDT--YKAEVAKQAIEAGAHIINDIW 143 (297)
T ss_dssp HHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSCEEEEC--SCHHHHHHHHHHTCCEEEETT
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC--CceEEEeC--CCHHHHHHHHHcCCCEEEECC
Confidence 367888999999999653321111112222222 3333333 78999988 588888889999999886544
No 491
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=76.59 E-value=12 Score=34.05 Aligned_cols=73 Identities=18% Similarity=0.097 Sum_probs=42.5
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhc-CCCcEEEecCC--------CCHHHHHHH----HHcCC
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQ-GRIPVFLDGGV--------RRGTDVFKA----LALGA 300 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~-~~~~via~GGI--------~~~~dv~ka----l~lGA 300 (367)
.+++.+.+.|+|.|.+.-.-|. . ......+.+.++++.++ ..+|+|..... ++.+.+.++ ..+||
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~-~-~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GA 173 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGS-G-FEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGA 173 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTS-T-THHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCEEEEEEecCC-c-CHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCC
Confidence 4567788999999988432121 0 11122333444444332 26888886544 155655543 45799
Q ss_pred CEEEechH
Q 017718 301 SGIFIGRP 308 (367)
Q Consensus 301 d~V~ig~~ 308 (367)
|.|-.+.+
T Consensus 174 D~vkt~~~ 181 (263)
T 1w8s_A 174 DAMKIKYT 181 (263)
T ss_dssp SEEEEECC
T ss_pred CEEEEcCC
Confidence 99999864
No 492
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=76.46 E-value=7.3 Score=37.38 Aligned_cols=41 Identities=32% Similarity=0.588 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 263 TIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 263 ~~~~l~~i~~~~~~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
+++.+..+++.. ++||++= |+.+.+|+.++..+|||+|.+.
T Consensus 217 ~~~~i~~lr~~~--~~PvivK-~v~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 217 SPRDIEEIAGHS--GLPVFVK-GIQHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp CHHHHHHHHHHS--SSCEEEE-EECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHc--CCCEEEE-cCCCHHHHHHHHHcCCCEEEEc
Confidence 566788887776 7899886 4799999999999999999994
No 493
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=76.37 E-value=23 Score=34.65 Aligned_cols=82 Identities=10% Similarity=-0.037 Sum_probs=59.6
Q ss_pred HHHhhc--CCCEEEEec--CCHHHH----HHHHHcCCcEEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCC
Q 017718 216 WLQTIT--KLPILVKGV--LTAEDA----RIAVQAGAAGIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVR 287 (367)
Q Consensus 216 ~l~~~~--~~Pv~vK~v--~~~~~a----~~~~~~G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~ 287 (367)
.+|+.+ +++|.+..- .+.++| +.+.+.|++.|-- ...+..++.+.++++.. .+||.++..+.
T Consensus 232 avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--------P~~~~d~~~~~~l~~~~--~iPIa~dE~~~ 301 (440)
T 3t6c_A 232 HLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLED--------PVAPENTEWLKMLRQQS--STPIAMGELFV 301 (440)
T ss_dssp HHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEEC--------SSCGGGGGGHHHHHHHC--CSCEEECTTCC
T ss_pred HHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEEC--------CCChhhHHHHHHHHhhc--CCCEEeCcccC
Confidence 778877 578888764 455554 4455667776641 11123556677887766 79999999999
Q ss_pred CHHHHHHHHHcC-CCEEEech
Q 017718 288 RGTDVFKALALG-ASGIFIGR 307 (367)
Q Consensus 288 ~~~dv~kal~lG-Ad~V~ig~ 307 (367)
+..|+.+++..| +|.|++--
T Consensus 302 ~~~~~~~~i~~~a~d~v~~k~ 322 (440)
T 3t6c_A 302 NVNEWKPLIDNKLIDYIRCHI 322 (440)
T ss_dssp SHHHHHHHHHTTCCSEECCCG
T ss_pred CHHHHHHHHHcCCccceeech
Confidence 999999999987 79988764
No 494
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=76.11 E-value=19 Score=34.40 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=30.2
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G-~d~i~v 249 (367)
.+|+.+++||+.-+..++++|+.+++.| +|.|.+
T Consensus 273 ~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 273 LIKEAFGGPYIVNERFDKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 7888889999988777999999999988 999987
No 495
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=76.10 E-value=11 Score=36.27 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=30.8
Q ss_pred HHHhhcCCCEEEEecCCHHHHHHHHHcC-CcEEEE
Q 017718 216 WLQTITKLPILVKGVLTAEDARIAVQAG-AAGIIV 249 (367)
Q Consensus 216 ~l~~~~~~Pv~vK~v~~~~~a~~~~~~G-~d~i~v 249 (367)
++|+.+++||+.-+..+.++|+.+++.| +|+|.+
T Consensus 293 ~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 327 (377)
T 2r14_A 293 QMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAF 327 (377)
T ss_dssp HHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEee
Confidence 7888899999988877899999999998 999988
No 496
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=76.08 E-value=14 Score=32.82 Aligned_cols=74 Identities=18% Similarity=0.111 Sum_probs=49.0
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCCC-ccchHHHHHHHHHHhcC-CCcEEEecCCCCHHHHHHHH----HcCCCEEEech
Q 017718 234 EDARIAVQAGAAGIIVSNHGARQLDY-VPATIMALEEVVKATQG-RIPVFLDGGVRRGTDVFKAL----ALGASGIFIGR 307 (367)
Q Consensus 234 ~~a~~~~~~G~d~i~vs~~gg~~~~~-~~~~~~~l~~i~~~~~~-~~~via~GGI~~~~dv~kal----~lGAd~V~ig~ 307 (367)
.+++.+.+.|||.|.+.-.-|.-.++ .....+-|.++++..++ .++||..-+..+.+.+.++- .+|||+|=-.+
T Consensus 75 ~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 75 LEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 56889999999999984321110111 11233456666666543 48889888888888777654 36999998775
No 497
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=75.72 E-value=9.4 Score=37.07 Aligned_cols=73 Identities=18% Similarity=0.150 Sum_probs=48.9
Q ss_pred HHHHHHHHHc--CCcEEEEcCCCCCCCCCccchHHHHHHHHHHh---c-CCCcEEEecCCCCHHHHHHHHHcCCCEEEec
Q 017718 233 AEDARIAVQA--GAAGIIVSNHGARQLDYVPATIMALEEVVKAT---Q-GRIPVFLDGGVRRGTDVFKALALGASGIFIG 306 (367)
Q Consensus 233 ~~~a~~~~~~--G~d~i~vs~~gg~~~~~~~~~~~~l~~i~~~~---~-~~~~via~GGI~~~~dv~kal~lGAd~V~ig 306 (367)
.++|..+.+. |+|+|-+.|...+. + -..+.+.++++.+ + .++.|+++||| +.+.+.+....|+|.+.+|
T Consensus 224 ~~~al~~a~~l~~~d~IrlDs~~~~~---g-d~~~~v~~v~~~ld~~G~~~~~I~aSggl-~~~~i~~l~~~GvD~~gvG 298 (398)
T 2i1o_A 224 KFAAIKIAEMFDKVDYIRLDTPSSRR---G-NFEALIREVRWELALRGRSDIKIMVSGGL-DENTVKKLREAGAEAFGVG 298 (398)
T ss_dssp HHHHHHHHTTCSCCCEEEECCCGGGC---S-CHHHHHHHHHHHHHHTTCTTSEEEEESSC-CHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhhcCCcEEEeCCCCCCc---c-cHHHHHHHHHHHHHhCCCCceEEEEeCCC-CHHHHHHHHHcCCCEEEeC
Confidence 4555555555 99999998743110 1 1333444444332 2 26899999999 6788888888999999999
Q ss_pred hHHH
Q 017718 307 RPVV 310 (367)
Q Consensus 307 ~~~l 310 (367)
+.+.
T Consensus 299 t~l~ 302 (398)
T 2i1o_A 299 TSIS 302 (398)
T ss_dssp HHHH
T ss_pred cccC
Confidence 9665
No 498
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=75.65 E-value=3.6 Score=38.52 Aligned_cols=63 Identities=29% Similarity=0.490 Sum_probs=45.6
Q ss_pred HHHHHHHcCCc----EEEEcCCCCCCCCCccchHHHHHHHHHHhcCCCcEEEecCCCC--HHHHH----HHHH-cCCCEE
Q 017718 235 DARIAVQAGAA----GIIVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRR--GTDVF----KALA-LGASGI 303 (367)
Q Consensus 235 ~a~~~~~~G~d----~i~vs~~gg~~~~~~~~~~~~l~~i~~~~~~~~~via~GGI~~--~~dv~----kal~-lGAd~V 303 (367)
.++.+.+.|+| .|-+-- + +.+.++.+.. .+||+..||=.+ .++++ +++. .||.++
T Consensus 205 aaRiAaELGADs~~tivK~~y-----------~-e~f~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv 270 (307)
T 3fok_A 205 SVAIAAGLGNDSSYTWMKLPV-----------V-EEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGL 270 (307)
T ss_dssp HHHHHHTCSSCCSSEEEEEEC-----------C-TTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEE
T ss_pred HHHHHHHhCCCcCCCEEEeCC-----------c-HHHHHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 36788999999 887721 1 3345665555 699999998874 45655 4566 599999
Q ss_pred EechHHHH
Q 017718 304 FIGRPVVY 311 (367)
Q Consensus 304 ~ig~~~l~ 311 (367)
.+||-+++
T Consensus 271 ~vGRNIfQ 278 (307)
T 3fok_A 271 TVGRTLLY 278 (307)
T ss_dssp EECTTTSS
T ss_pred eechhhcc
Confidence 99997764
No 499
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=75.37 E-value=23 Score=30.85 Aligned_cols=83 Identities=20% Similarity=0.058 Sum_probs=51.6
Q ss_pred HHHHhhc-CCCE--EEEecCCHH-HHHHHHHcCCcEEEEcCCCCCCCCCccchH-HHHHHHHHHhcCCCcEEE-ecCCCC
Q 017718 215 KWLQTIT-KLPI--LVKGVLTAE-DARIAVQAGAAGIIVSNHGARQLDYVPATI-MALEEVVKATQGRIPVFL-DGGVRR 288 (367)
Q Consensus 215 ~~l~~~~-~~Pv--~vK~v~~~~-~a~~~~~~G~d~i~vs~~gg~~~~~~~~~~-~~l~~i~~~~~~~~~via-~GGI~~ 288 (367)
+.+|+.. +.|+ -+|....++ .++.+.++|+|+|+++..++ .... +.+..+.+ . .++.++ .=|+.|
T Consensus 51 ~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~--g~~~~~d~l~~~T 121 (218)
T 3jr2_A 51 STLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-L--NGEIQIEIYGNWT 121 (218)
T ss_dssp HHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECCSSCC
T ss_pred HHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-h--CCccceeeeecCC
Confidence 4677763 4455 456554443 47889999999999954221 1222 33333333 2 455554 345678
Q ss_pred HHHHHHHHHcCCCEEEec
Q 017718 289 GTDVFKALALGASGIFIG 306 (367)
Q Consensus 289 ~~dv~kal~lGAd~V~ig 306 (367)
++++.++..+|+|.+.+.
T Consensus 122 ~~~~~~~~~~g~d~v~~~ 139 (218)
T 3jr2_A 122 MQDAKAWVDLGITQAIYH 139 (218)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCccceeee
Confidence 889998888999987653
No 500
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=75.19 E-value=41 Score=31.94 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=73.3
Q ss_pred CCHHHHHHHH-HcC-----CcEEEEcC---CCCCCCCCccchHHHHHHHHHHhc---------CCCcEEEecCCCCH-HH
Q 017718 231 LTAEDARIAV-QAG-----AAGIIVSN---HGARQLDYVPATIMALEEVVKATQ---------GRIPVFLDGGVRRG-TD 291 (367)
Q Consensus 231 ~~~~~a~~~~-~~G-----~d~i~vs~---~gg~~~~~~~~~~~~l~~i~~~~~---------~~~~via~GGI~~~-~d 291 (367)
.++++|.... +.| +|.+.++. ||-+....-.-.++.|.+|.+.++ ..+|+..=||=..+ ++
T Consensus 182 T~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgSG~p~e~ 261 (349)
T 3elf_A 182 TSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGSGSLKSE 261 (349)
T ss_dssp CCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCTTCCHHH
T ss_pred CCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCCCCCHHH
Confidence 5688887754 677 89999863 554421111225678888877652 15899997765444 68
Q ss_pred HHHHHHcCCCEEEechHHHHHhh-------ccChH-------------------HHHHHHHHHHHHHHHHHHHhCCCC
Q 017718 292 VFKALALGASGIFIGRPVVYSLA-------AEGEK-------------------GVRRVLEMLREEFELAMALSGCRS 343 (367)
Q Consensus 292 v~kal~lGAd~V~ig~~~l~~l~-------~~G~~-------------------~v~~~i~~l~~el~~~m~~~G~~s 343 (367)
+.+++.+|..-|=|+|-+-++.. .+.++ -+....+.+++-++..|+.+|+.+
T Consensus 262 i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~~~~~~~~g~~~n~~~~Dpr~~l~~~~~a~~~~v~~~~~~~gs~~ 339 (349)
T 3elf_A 262 IEEALRYGVVKMNVDTDTQYAFTRPIAGHMFTNYDGVLKVDGEVGVKKVYDPRSYLKKAEASMSQRVVQACNDLHCAG 339 (349)
T ss_dssp HHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHTHHHHSCCTTCCCCHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHcCCEEEEcchHHHHHHHHHHHHHHHhCccccccccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 88999999999999997755421 11111 122233566777778888888754
Done!