STRING 9.05 
  AT1G52870 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT1G52870
peroxisomal membrane protein-related; peroxisomal membrane protein-related; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- integral to membrane, chloroplast; EXPRESSED IN- 21 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mpv17/PMP22 (InterPro-IPR007248); BEST Arabidopsis thaliana protein match is- peroxisomal membrane protein-related (TAIR-AT4G03410.2); Has 941 Blast hits to 941 proteins in 133 species- Archae - 0; Bacteria - 0; Metazoa - 495; Fungi - 210; Plants - 171; Viruses - 0; Other Eukaryotes - 6 [...] (366 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT1G23310
GGT1 (GLUTAMATE-GLYOXYLATE AMINOTRANSFERASE); L-alanine-2-oxoglutarate aminotransferase/ glycin [...] (481 aa)
       0.839
HPR
HPR; glycerate dehydrogenase/ poly(U) binding; Encodes hydroxypyruvate reductase. (386 aa)
       0.833
STN7
STN7 (Stt7 homolog STN7); kinase/ protein kinase; STN7 protein kinase; required for state trans [...] (562 aa)
       0.821
AT1G23740
oxidoreductase, zinc-binding dehydrogenase family protein; oxidoreductase, zinc-binding dehydro [...] (386 aa)
       0.817
AT1G55480
binding / protein binding; binding / protein binding; FUNCTIONS IN- protein binding, binding; L [...] (335 aa)
       0.794
PMDH2
PMDH2 (peroxisomal NAD-malate dehydrogenase 2); malate dehydrogenase; encodes a microbody NAD-d [...] (363 aa)
       0.786
AT1G77090
thylakoid lumenal 29.8 kDa protein; thylakoid lumenal 29.8 kDa protein; FUNCTIONS IN- calcium i [...] (260 aa)
       0.776
HCF173
HCF173 (high chlorophyll fluorescence phenotype 173); binding / catalytic/ transcription repres [...] (598 aa)
       0.770
AT5G03880
electron carrier; electron carrier; FUNCTIONS IN- electron carrier activity; INVOLVED IN- cell [...] (339 aa)
       0.768
SBPASE
SBPASE (sedoheptulose-bisphosphatase); phosphoric ester hydrolase/ sedoheptulose-bisphosphatase [...] (393 aa)
       0.766
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
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