Query 017720
Match_columns 367
No_of_seqs 243 out of 1483
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 03:51:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rfy_A Peptidyl-prolyl CIS-tra 100.0 7.1E-81 2.4E-85 618.6 21.2 283 84-366 16-299 (369)
2 2ok3_A Peptidyl-prolyl CIS-tra 99.9 5.1E-24 1.7E-28 189.5 10.9 91 240-363 2-93 (161)
3 2fu0_A Cyclophilin, putative; 99.9 6.6E-24 2.3E-28 188.8 10.7 92 239-363 6-98 (160)
4 2x7k_A Peptidyl-prolyl CIS-tra 99.9 7.5E-24 2.6E-28 189.5 10.8 94 237-363 10-104 (166)
5 2b71_A Cyclophilin-like protei 99.9 2.5E-24 8.6E-29 197.6 7.2 102 229-363 29-131 (196)
6 2poe_A Cyclophilin-like protei 99.9 1.1E-23 3.8E-28 191.5 10.6 94 238-364 16-110 (185)
7 1zkc_A Peptidyl-prolyl CIS-tra 99.9 1.9E-23 6.4E-28 192.0 11.7 95 236-363 17-112 (197)
8 2hq6_A Serologically defined c 99.9 2.8E-23 9.7E-28 188.9 11.3 100 229-363 17-117 (185)
9 2a2n_A Peptidylprolyl isomeras 99.9 3.7E-23 1.2E-27 186.8 11.6 93 238-363 21-114 (176)
10 3bkp_A Cyclophilin; malaria, i 99.9 5.2E-23 1.8E-27 193.2 12.1 103 228-365 13-118 (232)
11 3bo7_A Peptidyl-prolyl CIS-tra 99.9 4.3E-23 1.5E-27 189.6 11.0 96 235-363 3-111 (201)
12 1v9t_A Cyclophilin B; beta bar 99.9 5.1E-23 1.7E-27 183.8 10.9 95 236-366 2-97 (166)
13 2k7n_A Peptidyl-prolyl CIS-tra 99.9 7.2E-23 2.5E-27 188.9 10.4 94 237-363 10-104 (203)
14 2z6w_A Peptidyl-prolyl CIS-tra 99.9 3.3E-22 1.1E-26 178.6 10.8 96 239-363 4-104 (165)
15 3ich_A Peptidyl-prolyl CIS-tra 99.9 3.8E-22 1.3E-26 181.8 10.5 102 231-363 10-116 (188)
16 1w74_A Peptidyl-prolyl CIS-tra 99.9 6.4E-22 2.2E-26 180.9 11.3 91 237-363 22-128 (191)
17 1lop_A Cyclophilin A; rotamase 99.9 3.3E-22 1.1E-26 178.2 8.6 90 241-366 2-92 (164)
18 1a58_A Cyclophilin; isomerase, 99.9 8.3E-22 2.9E-26 177.8 11.1 97 238-363 6-115 (177)
19 2r99_A Peptidyl-prolyl CIS-tra 99.9 1.1E-21 3.7E-26 176.5 11.6 97 238-363 11-112 (173)
20 2cmt_A Peptidyl-prolyl CIS-tra 99.9 1.1E-21 3.8E-26 176.4 11.5 97 238-363 10-111 (172)
21 2igv_A Peptidyl-prolyl CIS-tra 99.9 8.3E-22 2.8E-26 177.2 10.5 97 238-363 3-111 (173)
22 1mzw_A Cyclophilin H, U-snRNP- 99.9 1.1E-21 3.7E-26 177.2 11.1 97 238-363 10-116 (177)
23 1qng_A Peptidyl-prolyl CIS-tra 99.9 1E-21 3.5E-26 176.2 10.9 97 238-363 3-110 (170)
24 3pmp_A Cyclophilin A; peptidyl 99.9 1.2E-21 4.1E-26 174.6 10.7 84 254-363 15-103 (164)
25 2wfi_A Peptidyl-prolyl CIS-tra 99.9 1.3E-21 4.5E-26 176.8 11.1 97 238-363 9-118 (179)
26 3s6m_A Peptidyl-prolyl CIS-tra 99.9 6.4E-22 2.2E-26 176.5 8.5 92 239-366 4-96 (167)
27 1z81_A Cyclophilin; structural 99.9 1.7E-21 5.8E-26 182.6 11.6 98 237-363 58-165 (229)
28 2haq_A Cyclophilin; rotamase, 99.9 1.5E-21 5.2E-26 175.7 10.8 95 239-363 12-111 (172)
29 2c3b_A Ppiase, cyclophilin; is 99.9 2.8E-22 9.6E-27 180.2 5.9 97 241-363 5-108 (172)
30 4fru_A Cyclophilin B, peptidyl 99.9 1.1E-21 3.8E-26 178.0 9.4 101 232-363 8-113 (185)
31 2poy_A Peptidyl-prolyl CIS-tra 99.8 1.9E-21 6.5E-26 177.0 10.5 99 236-363 17-127 (186)
32 1ihg_A Cyclophilin 40; ppiase 99.8 2.1E-21 7.1E-26 189.1 11.4 99 238-366 15-126 (370)
33 2he9_A NK-tumor recognition pr 99.8 2.9E-21 9.8E-26 176.6 11.0 97 238-363 19-128 (192)
34 3k2c_A Peptidyl-prolyl CIS-tra 99.8 6E-21 2.1E-25 174.5 10.8 97 238-363 27-128 (193)
35 3rdd_A Peptidyl-prolyl CIS-tra 99.8 8.4E-21 2.9E-25 172.3 10.5 99 236-363 20-123 (184)
36 2ose_A Probable peptidyl-proly 99.8 1.5E-20 5.3E-25 176.5 10.3 100 231-361 7-133 (234)
37 1vyk_A Oxygen-evolving enhance 95.2 0.053 1.8E-06 47.6 7.8 125 85-212 8-143 (149)
38 3zsu_A TLL2057 protein, cyanoq 94.0 0.18 6.2E-06 43.4 7.9 93 116-211 28-120 (130)
39 3ls0_A SLL1638 protein, PSBQ; 92.1 0.21 7.3E-06 43.1 5.6 93 116-211 30-123 (133)
40 2khf_A PLNJ; anti-microbial, b 39.5 9.1 0.00031 23.7 0.7 16 271-286 3-18 (26)
41 2nnz_A Hypothetical protein; b 33.4 29 0.00099 30.1 3.3 31 240-278 31-61 (153)
42 4dnd_A Syntaxin-10, SYN10; str 32.3 1.1E+02 0.0037 25.8 6.6 68 116-199 31-100 (130)
43 3kop_A Uncharacterized protein 27.0 67 0.0023 29.0 4.6 32 240-278 23-55 (188)
44 2c5k_T Syntaxin TLG1, T-snare 25.8 2.5E+02 0.0085 22.2 7.4 25 168-192 36-60 (95)
45 3ghg_C Fibrinogen gamma chain; 24.0 1.9E+02 0.0067 28.9 7.8 100 104-218 27-136 (411)
46 4aik_A Transcriptional regulat 20.7 53 0.0018 27.1 2.5 86 107-192 52-145 (151)
47 4dnd_A Syntaxin-10, SYN10; str 20.4 1.9E+02 0.0064 24.3 5.9 18 175-192 67-84 (130)
No 1
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=7.1e-81 Score=618.61 Aligned_cols=283 Identities=84% Similarity=1.311 Sum_probs=274.5
Q ss_pred hcCCCCCcccccCCCCCCCHHHHhhhcCCCCCHhHHHHhhhHhhhhhhhhccccccChhhhhhHHHHHHHHhcccchhhc
Q 017720 84 INMAMPDVSVLISGPPIKDPGALLRYALPIDNKAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVE 163 (367)
Q Consensus 84 ~~~~~~~~a~l~~g~~i~d~~a~LR~alP~~n~~ir~iQ~~LE~i~~~Lr~~~~k~w~~~~~~v~~a~~~l~~~~~~il~ 163 (367)
.+++.|..|+||+|||||||+|||||||||+|++||+||++||+|+++||+||||||++|++||++|+++|++++++||+
T Consensus 16 ~~~~~~~~~~l~~g~~~~~~~a~lr~alp~~~~~~~~~q~~le~~~~~lr~~~~k~~~~~~~~~~~~~~~~~~~~~~il~ 95 (369)
T 3rfy_A 16 ANPVIPDVSVLISGPPIKDPEALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNVRQASRTLQQGKSIIVA 95 (369)
T ss_dssp ECTTSCSCCEEEESTTSCCHHHHHHHHSCCCCHHHHHHHHHHHTHHHHTTSCSTTTHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred ecccCchhhccCCCCCCCCHHHHHhhhcCCCChhHHHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHhhCHHHHHh
Confidence 46888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHhHHHHHHHHhhcCccchhHHHHHHHHHhhchhhhcccCCCCCCCcccccCCCCCCceEEEE
Q 017720 164 GLAESKKEHGMELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGGVEEDMVDGFPYEVPEEYQSMPLLKGRATVDM 243 (367)
Q Consensus 164 ~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd~~~~~~~~~~~L~~v~~lE~~~v~~~p~~vP~~y~~~P~l~GratV~~ 243 (367)
+||+++|++|+++|++|+++|++|++++++||+++|...|+++|+.|++||++|+++|||+||++|..+|+++|+++|+|
T Consensus 96 ~v~~~~~~~~~~~~~~l~~~l~~l~~~~~~~d~~~~~~~~~~~l~~v~~le~~~~~~fp~~vP~~y~~~P~l~gra~V~m 175 (369)
T 3rfy_A 96 GFAESKKDHGNEMIEKLEAGMQDMLKIVEDRKRDAVAPKQKEILKYVGGIEEDMVDGFPYEVPEEYRNMPLLKGRASVDM 175 (369)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHHHHHCCCSSCCCSSSGGGHHHHHHHHHHHHHHSSCSSCSSCCSSCTTSCEECSEEEEEE
T ss_pred hcChhhHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhhccCCCccCchhcccCccCCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeeeCCceEecCCCCCCCCCccCCCCCccccccccc
Q 017720 244 KVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTIPLEI 323 (367)
Q Consensus 244 ~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV~gFViQgGDp~g~g~G~~dp~tg~~~~iPlEi 323 (367)
+|+.+++++.+.|+|+|+||++.||+||+||++||++|||||+.||||+|||||||||.++|.||.+|.++..+.+|+|+
T Consensus 176 ~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV~gFmIQgGDp~g~G~G~~~~~~g~~~~iP~E~ 255 (369)
T 3rfy_A 176 KVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRSDGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEI 255 (369)
T ss_dssp EEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEEEEEEECCCCCCCCCSCCCSCCCCCCCSSSSSS
T ss_pred EEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeeeCCeeEecCCCCCCCCCccCcccCcCcccCccc
Confidence 99988877788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecC-CCCC
Q 017720 324 MVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARD-VSMG 366 (367)
Q Consensus 324 ~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs-~~Pg 366 (367)
...|.+.|+|+.+|+++||+...+.|+||++|+|||||+ ..||
T Consensus 256 ~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPn 299 (369)
T 3rfy_A 256 MVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFEND 299 (369)
T ss_dssp CSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCC
T ss_pred cccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCC
Confidence 999999999999999999887788999999999999998 3454
No 2
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.90 E-value=5.1e-24 Score=189.51 Aligned_cols=91 Identities=30% Similarity=0.509 Sum_probs=80.3
Q ss_pred EEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcccc
Q 017720 240 TVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTRT 318 (367)
Q Consensus 240 tV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~~~ 318 (367)
.|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||+ ++||+||||+.+++.|
T Consensus 2 ~v~~~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g----------- 62 (161)
T 2ok3_A 2 SVTLHTD--------VGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRG----------- 62 (161)
T ss_dssp EEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC-----------
T ss_pred EEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCC-----------
Confidence 5778887 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 319 IPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 319 iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+++++. .+.++|+++|+|||||++
T Consensus 63 ----------g~si~g~~~~dE~----~~~l~h~~~G~lsma~~g 93 (161)
T 2ok3_A 63 ----------GNSIWGKKFEDEY----SEYLKHNVRGVVSMANNG 93 (161)
T ss_dssp ----------CCCTTSSCBCCCC----CTTCCSCSTTEEEECCSS
T ss_pred ----------CCcccCCcccccc----CcCcCcCCCeEEEEecCC
Confidence 2467888887652 357899999999999986
No 3
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.90 E-value=6.6e-24 Score=188.81 Aligned_cols=92 Identities=23% Similarity=0.234 Sum_probs=80.6
Q ss_pred eEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCccc
Q 017720 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTR 317 (367)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~~ 317 (367)
..|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||+ ++||||||||.++|.|
T Consensus 6 ~~v~~~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g---------- 67 (160)
T 2fu0_A 6 KSAIIYTT--------MGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTG---------- 67 (160)
T ss_dssp CEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC----------
T ss_pred CEEEEEec--------CccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCC----------
Confidence 47888898 7999999999999999999999999999999999999 9999999999877655
Q ss_pred cccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 318 TIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 318 ~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++. .+.++|+.+|+|||||++
T Consensus 68 -----------g~si~g~~~~dE~----~~~l~h~~~G~lsmA~~g 98 (160)
T 2fu0_A 68 -----------GESIWGNEFEDEF----FDHLNHSKPFMVSMANCG 98 (160)
T ss_dssp -----------CCCTTSSCBCCCC----BTTBCSSSSSEEEECCSS
T ss_pred -----------CCcccCCCccccc----cCCcccCCceEEEEecCC
Confidence 2467888887752 346888899999999975
No 4
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.90 E-value=7.5e-24 Score=189.50 Aligned_cols=94 Identities=30% Similarity=0.529 Sum_probs=82.2
Q ss_pred CceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCc
Q 017720 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEK 315 (367)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~ 315 (367)
+...|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++||||||||.+++.|
T Consensus 10 ~~~~v~l~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~g-------- 73 (166)
T 2x7k_A 10 QPPNVYLETS--------MGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRG-------- 73 (166)
T ss_dssp CCSEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSC--------
T ss_pred CCCEEEEEeC--------CCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCC--------
Confidence 3468999998 7999999999999999999999999999999999999 9999999999877655
Q ss_pred cccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 316 TRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 316 ~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+++. .+.++|+++|+|||||++
T Consensus 74 -------------g~si~g~~~~dE~----~~~l~h~~~G~lsmAn~g 104 (166)
T 2x7k_A 74 -------------GASIYGKQFEDEL----HPDLKFTGAGILAMANAG 104 (166)
T ss_dssp -------------CCCTTSSCBCCCC----CTTSCCCSTTEEEECBSS
T ss_pred -------------CCccCCCcccccc----ccccCCCCCeEEEEeeCC
Confidence 2467888887652 367889899999999875
No 5
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.90 E-value=2.5e-24 Score=197.56 Aligned_cols=102 Identities=28% Similarity=0.471 Sum_probs=86.4
Q ss_pred cccCCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCC
Q 017720 229 YQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEG 307 (367)
Q Consensus 229 y~~~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G 307 (367)
|-.+|...++..|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++||||||||.++|.|
T Consensus 29 ~~~~~~~~~~~~V~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~g 100 (196)
T 2b71_A 29 YYKMKGHTERGYITIYTN--------LGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKG 100 (196)
T ss_dssp HHHHHHHHHSCEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSC
T ss_pred eeecCCcCCCcEEEEEeC--------CCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCC
Confidence 333444446678999998 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 308 ~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++ ..+.++|+++|+|||||++
T Consensus 101 ---------------------g~si~g~~~~dE----~~~~l~h~~~G~lsMAn~g 131 (196)
T 2b71_A 101 ---------------------GKSIYGEYFEDE----INKELKHTGAGILSMSNNG 131 (196)
T ss_dssp ---------------------CCBTTBSCBCCC----CCTTCCCCSTTEEEECCSS
T ss_pred ---------------------CCccCCCccccc----ccCCcCcCCCeEEEEccCC
Confidence 246788778764 2467899999999999875
No 6
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.89 E-value=1.1e-23 Score=191.53 Aligned_cols=94 Identities=22% Similarity=0.428 Sum_probs=82.4
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~ 316 (367)
...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 16 ~~~v~i~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g--------- 78 (185)
T 2poe_A 16 FQGVRIITN--------YGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKG--------- 78 (185)
T ss_dssp CCEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSC---------
T ss_pred ceEEEEEec--------CccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCC---------
Confidence 467888887 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCCC
Q 017720 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDVS 364 (367)
Q Consensus 317 ~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~ 364 (367)
+.++||.+|+++ ..+.++|+++|+|||||+++
T Consensus 79 ------------g~si~g~~~~dE----~~~~l~h~~~G~lsmA~~g~ 110 (185)
T 2poe_A 79 ------------GESIYGRYFDDE----IYPELKYDRRGILSMASKGA 110 (185)
T ss_dssp ------------CCBTTBSCBCCC----CCTTSCCCSTTEEEECCSCC
T ss_pred ------------CCccCCCccccc----ccCCCccCCCeEEEEecCCC
Confidence 246788888764 23678899999999999885
No 7
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.89 E-value=1.9e-23 Score=191.95 Aligned_cols=95 Identities=27% Similarity=0.557 Sum_probs=83.4
Q ss_pred CCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCC
Q 017720 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTE 314 (367)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg 314 (367)
+...+|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.|
T Consensus 17 ~~~~~v~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~G------- 81 (197)
T 1zkc_A 17 RGSGYVRLHTN--------KGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTG------- 81 (197)
T ss_dssp CSCEEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSC-------
T ss_pred CCCcEEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCC-------
Confidence 45678999998 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 315 KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 315 ~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++ ..+.++|+.+|+|||||++
T Consensus 82 --------------g~si~g~~f~dE----~~~~l~h~~~G~lsMAn~g 112 (197)
T 1zkc_A 82 --------------GESYWGKPFKDE----FRPNLSHTGRGILSMANSG 112 (197)
T ss_dssp --------------CCBTTBSCBCCC----CCTTCCSCSTTEEEECCSS
T ss_pred --------------CCccCCCccccc----cCcCcCCCCceEEEEecCC
Confidence 245678777764 2467889999999999975
No 8
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.89 E-value=2.8e-23 Score=188.91 Aligned_cols=100 Identities=33% Similarity=0.496 Sum_probs=84.0
Q ss_pred cccCCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCC
Q 017720 229 YQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEG 307 (367)
Q Consensus 229 y~~~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G 307 (367)
|...|..+ ..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++|||||||+.+++.|
T Consensus 17 ~~~~~~~~--~~V~l~T~--------~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g 86 (185)
T 2hq6_A 17 RGSEPPTN--GKVLLKTT--------AGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSG 86 (185)
T ss_dssp TTCCCCCB--CEEEEEET--------TEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSC
T ss_pred cccCCCCC--CEEEEEeC--------CccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCC
Confidence 34445443 46788898 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 308 ~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++. .+.++|+.+|+|||||++
T Consensus 87 ---------------------g~si~g~~~~dE~----~~~l~h~~~G~lsMA~~g 117 (185)
T 2hq6_A 87 ---------------------GESIYGAPFKDEF----HSRLRFNRRGLVAMANAG 117 (185)
T ss_dssp ---------------------CCCTTSSCBCCCC----BTTBCSCSSSEEEECCSS
T ss_pred ---------------------CCcccCCcccccc----ccCcccCCCeEEEEccCC
Confidence 2467888887652 346889999999999986
No 9
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.89 E-value=3.7e-23 Score=186.78 Aligned_cols=93 Identities=25% Similarity=0.383 Sum_probs=81.5
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCcc
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKT 316 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~ 316 (367)
...|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++|||||||+.++|.|
T Consensus 21 ~~~v~~~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~g--------- 83 (176)
T 2a2n_A 21 SDSAIIHTS--------MGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMG--------- 83 (176)
T ss_dssp CSEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSC---------
T ss_pred CCEEEEEec--------CccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCC---------
Confidence 457888998 7999999999999999999999999999999999999 9999999999877655
Q ss_pred ccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 317 RTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 317 ~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++. .+.++|+.+|+|||||++
T Consensus 84 ------------g~si~g~~~~dE~----~~~l~h~~~G~lsmA~~g 114 (176)
T 2a2n_A 84 ------------GESIWGGEFEDEF----HSTLRHDRPYTLSMANAG 114 (176)
T ss_dssp ------------CCCTTSSCBCCCC----CTTCCSCSSSEEEECCSS
T ss_pred ------------CCcccCCcccccc----ccccccCCceEEEEEeCC
Confidence 2467888887752 346889999999999975
No 10
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.89 E-value=5.2e-23 Score=193.16 Aligned_cols=103 Identities=21% Similarity=0.295 Sum_probs=85.0
Q ss_pred ccccCCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCC
Q 017720 228 EYQSMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAE 306 (367)
Q Consensus 228 ~y~~~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~ 306 (367)
.|...|..+ ..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||| ++||||||||.++|.
T Consensus 13 ~~~~~p~~~--~~V~l~T~--------~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~ 82 (232)
T 3bkp_A 13 NLYFQGSTR--GKVVLHTS--------LGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGR 82 (232)
T ss_dssp GGGCCCSCB--CEEEEEET--------TEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSS
T ss_pred cccccCCCC--CEEEEEEC--------CCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCC
Confidence 455666554 46788898 7999999999999999999999999999999999999 999999999987766
Q ss_pred CccCCCCCccccccccccccCCCCCCC--CcchhhhhcccccCCCCCCCCeEEEeecCCCC
Q 017720 307 GFIDPSTEKTRTIPLEIMVEGEKSPFY--GATLEELGLYKAQTKLPFNAFGTMAMARDVSM 365 (367)
Q Consensus 307 G~~dp~tg~~~~iPlEi~~~G~~~piy--g~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~P 365 (367)
|. .++| |.+|+++ ..+.++|+.+|+|||||++.+
T Consensus 83 Gg---------------------~si~~~g~~f~dE----~~~~l~h~~~G~lsMA~~g~~ 118 (232)
T 3bkp_A 83 GG---------------------ADTTFDGKPFDVE----THPRLKFRYRGLVGVANLGRS 118 (232)
T ss_dssp CC---------------------CCCTTTTCCBCCC----CCTTCCCCSTTEEEECCCC--
T ss_pred CC---------------------CccccCCCccCCc----cccCcCcCCCeEEEEeccCCc
Confidence 52 3566 6677764 235688999999999998754
No 11
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.89 E-value=4.3e-23 Score=189.63 Aligned_cols=96 Identities=24% Similarity=0.389 Sum_probs=76.3
Q ss_pred CCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecC-----CCCCCCCCc
Q 017720 235 LKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTG-----DPEGPAEGF 308 (367)
Q Consensus 235 l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgG-----Dp~g~g~G~ 308 (367)
++.+.+|.|+|+ .|+|+|+||++.||+||+||+.||+.|||||+.|||| ++|||||| ||.++|.|.
T Consensus 3 ~~~~~~v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg 74 (201)
T 3bo7_A 3 LKKKGYLRIVTT--------QGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQ 74 (201)
T ss_dssp --CCEEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------
T ss_pred CCCceEEEEEeC--------CCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCC
Confidence 346788999998 7999999999999999999999999999999999999 99999999 998776652
Q ss_pred cCCCCCccccccccccccCCCCCCC-------CcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 309 IDPSTEKTRTIPLEIMVEGEKSPFY-------GATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 309 ~dp~tg~~~~iPlEi~~~G~~~piy-------g~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
.++| +.+|+++ ..+.++|+++|+|||||++
T Consensus 75 ---------------------~si~~~~~~~~g~~f~dE----~~~~l~h~~~G~lsmA~~g 111 (201)
T 3bo7_A 75 ---------------------QSPRSISGFPGGAPFEDE----FDNRLVHQGIGVLSMANDG 111 (201)
T ss_dssp ---------------------CCSSCCCSSTTCCCBCCC----CCTTCCCCSTTEEEECCSS
T ss_pred ---------------------ccccccccccCCCcccCc----ccCCCCcCCCcEEEEeeCC
Confidence 2344 5556553 2467889999999999975
No 12
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.88 E-value=5.1e-23 Score=183.77 Aligned_cols=95 Identities=28% Similarity=0.378 Sum_probs=76.7
Q ss_pred CCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCC
Q 017720 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTE 314 (367)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg 314 (367)
+|+..|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++|||||||+.+.+.+.
T Consensus 2 ~~~~~v~~~t~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~~------ 67 (166)
T 1v9t_A 2 KGDPHVLLTTS--------AGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQK------ 67 (166)
T ss_dssp CCSCEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCCBC------
T ss_pred CCCeEEEEEeC--------CccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCCCC------
Confidence 47789999998 7999999999999999999999999999999999999 99999999997653321
Q ss_pred ccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCCCCC
Q 017720 315 KTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDVSMG 366 (367)
Q Consensus 315 ~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~Pg 366 (367)
.|+.+|+++. ....+|.+|+|||||++.|+
T Consensus 68 -----------------~~g~~~~dE~-----~~~l~~~~G~lsmA~~~~p~ 97 (166)
T 1v9t_A 68 -----------------KPNPPIKNEA-----DNGLRNTRGTIAMARTADKD 97 (166)
T ss_dssp -----------------CCCCCBCCCG-----GGSCCCCTTEEEECCCSSTT
T ss_pred -----------------CCCCcccccc-----cccccCCceEEEEeecCCCC
Confidence 1233344432 12246789999999986564
No 13
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.88 E-value=7.2e-23 Score=188.86 Aligned_cols=94 Identities=30% Similarity=0.529 Sum_probs=82.0
Q ss_pred CceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCc
Q 017720 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEK 315 (367)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~ 315 (367)
....|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++||||||||.+++.|
T Consensus 10 ~~~~V~l~T~--------~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~g-------- 73 (203)
T 2k7n_A 10 QPPNVYLETS--------MGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRG-------- 73 (203)
T ss_dssp CCSEEEEEES--------SCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSC--------
T ss_pred CCCEEEEEeC--------CCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCC--------
Confidence 3468999998 7999999999999999999999999999999999999 9999999999876655
Q ss_pred cccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 316 TRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 316 ~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+++. .+.++|+++|+|||||++
T Consensus 74 -------------g~si~g~~f~dE~----~~~l~h~~~G~lsMAn~g 104 (203)
T 2k7n_A 74 -------------GASIYGKQFEDEL----HPDLKFTGAGILAMANAG 104 (203)
T ss_dssp -------------CCTTSCSCBCCCC----CCSSCCCSSCEEEEEESS
T ss_pred -------------CCccCCCcccccc----cccccCCCCeEEEEeeCC
Confidence 2467888887642 367889899999999875
No 14
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.87 E-value=3.3e-22 Score=178.60 Aligned_cols=96 Identities=25% Similarity=0.349 Sum_probs=79.2
Q ss_pred eEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccCCCC
Q 017720 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPST 313 (367)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGDp~-g~g~G~~dp~t 313 (367)
..|.|+++..+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||+ ++||+||||+. ++|.|
T Consensus 4 ~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g------ 74 (165)
T 2z6w_A 4 PLVYLDVDANG---KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTG------ 74 (165)
T ss_dssp CEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSC------
T ss_pred CEEEEEEEECC---EeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCC------
Confidence 35666665432 247999999999999999999999999 999 999999999 99999999985 45544
Q ss_pred CccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 314 EKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 314 g~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+|+ .+.++|+.+|+|||||++
T Consensus 75 ---------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~g 104 (165)
T 2z6w_A 75 ---------------GKSIYGSRFPDE-----NFTLKHVGPGVLSMANAG 104 (165)
T ss_dssp ---------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred ---------------CCcccCCcccCc-----ccccccCCCCEEEEeeCC
Confidence 246788878764 467888889999999986
No 15
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.87 E-value=3.8e-22 Score=181.84 Aligned_cols=102 Identities=26% Similarity=0.401 Sum_probs=82.9
Q ss_pred cCCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCC-CCCCC
Q 017720 231 SMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPA 305 (367)
Q Consensus 231 ~~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGD-p~g~g 305 (367)
..|.++.++.+++.+.. ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++||||||| +.++|
T Consensus 10 ~~p~~~~~v~~di~i~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g 84 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGD-----EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDG 84 (188)
T ss_dssp CSCEEEEEEEEEEEETT-----EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCcCCeEEEEEEECC-----EeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCC
Confidence 45666666666665431 237999999999999999999999994 899 999999999 999999999 56665
Q ss_pred CCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 306 EGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 306 ~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
.| +.++||.+|+++ ++.++|+++|+|||||++
T Consensus 85 ~g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~g 116 (188)
T 3ich_A 85 TG---------------------GKSIYGERFPDE-----NFKLKHYGPGWVSMANAG 116 (188)
T ss_dssp SC---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred CC---------------------CccccCCccccc-----ccCcccCCCeEEEEccCC
Confidence 55 246788888764 567889999999999986
No 16
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.86 E-value=6.4e-22 Score=180.88 Aligned_cols=91 Identities=34% Similarity=0.518 Sum_probs=77.2
Q ss_pred CceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhh---------------hccCCCCceeeee-CCceEecCC
Q 017720 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV---------------QRHFYDGMEIQRA-DGFVVQTGD 300 (367)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv---------------~~GfYDG~~FhRV-~gFViQgGD 300 (367)
...+|.|+|+ .|+|+|+||++.||+||+||+.|| +.+||||+.|||| ++|||||||
T Consensus 22 ~~~~v~l~t~--------~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd 93 (191)
T 1w74_A 22 ATATATLHTN--------RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGD 93 (191)
T ss_dssp CSEEEEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECC
T ss_pred CCeEEEEEec--------ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCC
Confidence 3578889998 799999999999999999999999 4689999999999 999999999
Q ss_pred CCCCCCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 301 PEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 301 p~g~g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|.|. ||.+|+|+ ..+.++|+++|+|||||++
T Consensus 94 ~~g~G~gg------------------------~g~~f~dE----~~~~l~h~~~G~lsMAn~g 128 (191)
T 1w74_A 94 PTGTGRGG------------------------PGYKFADE----FHPELQFDKPYLLAMANAG 128 (191)
T ss_dssp TTSSSSCC------------------------SSCCBCCC----CCTTCCSCSSSEEEECCSS
T ss_pred CCCCCCCC------------------------CCCccccc----cccCCCcCCCcEEEEeeCC
Confidence 98776651 34445543 2457889999999999976
No 17
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.86 E-value=3.3e-22 Score=178.21 Aligned_cols=90 Identities=27% Similarity=0.323 Sum_probs=72.1
Q ss_pred EEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCccccc
Q 017720 241 VDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTRTI 319 (367)
Q Consensus 241 V~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~~~i 319 (367)
|.|+|+ .|+|+|+||++.||+||+||++||++|||||+.|||| ++|||||||+... .|
T Consensus 2 v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~-~g------------ 60 (164)
T 1lop_A 2 VTFHTN--------HGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG-MK------------ 60 (164)
T ss_dssp EEEEET--------TEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT-TE------------
T ss_pred EEEEeC--------CCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC-CC------------
Confidence 678888 7999999999999999999999999999999999999 9999999998631 12
Q ss_pred cccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCCCCC
Q 017720 320 PLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDVSMG 366 (367)
Q Consensus 320 PlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~Pg 366 (367)
..+|+.+|+++. .+.+ +|.+|+|||||+..|+
T Consensus 61 ----------~~~~g~~~~dE~----~~~l-~~~~G~lsmA~~~~p~ 92 (164)
T 1lop_A 61 ----------QKATKEPIKNEA----NNGL-KNTRGTLAMARTQAPH 92 (164)
T ss_dssp ----------ECCCCCCBCCCC----CSSC-CCCTTEEEECCCSSTT
T ss_pred ----------cCCCCCcccccc----cccc-ccCccEEEEeecCCCC
Confidence 123555555532 1234 4589999999976564
No 18
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.86 E-value=8.3e-22 Score=177.77 Aligned_cols=97 Identities=24% Similarity=0.330 Sum_probs=80.5
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhc--------c---CCCCceeeee-CCceEecCCCC-CC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--------H---FYDGMEIQRA-DGFVVQTGDPE-GP 304 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--------G---fYDG~~FhRV-~gFViQgGDp~-g~ 304 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||+.||+. | ||||+.|||| ++|||||||+. ++
T Consensus 6 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 6 RRRVFLDVTIDG---NLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp CEEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSS
T ss_pred CcEEEEEEEECC---EeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCC
Confidence 557777776533 2489999999999999999999999974 4 9999999999 99999999986 55
Q ss_pred CCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 305 g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
|.| +.++|+.+|+|+ ...++|+.+|+|||||++
T Consensus 83 g~g---------------------g~si~g~~f~dE-----~~~~~h~~~G~lsmAn~g 115 (177)
T 1a58_A 83 GTG---------------------GESIYGGMFDDE-----EFVMKHDEPFVVSMANKG 115 (177)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSSSEEEECCSS
T ss_pred CCC---------------------CCcccCCcccCc-----ccCcccCCCeEEEEeeCC
Confidence 554 246788888875 346889999999999975
No 19
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.86 E-value=1.1e-21 Score=176.53 Aligned_cols=97 Identities=25% Similarity=0.400 Sum_probs=79.1
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhh--hccC-CCCceeeee-CCceEecCCCC-CCCCCccCCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV--QRHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPS 312 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv--~~Gf-YDG~~FhRV-~gFViQgGDp~-g~g~G~~dp~ 312 (367)
+..|.|++...+ ...|+|+|+||++.||+||+||++|| ++|| |||+.|||+ ++|||||||+. ++|.|
T Consensus 11 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g----- 82 (173)
T 2r99_A 11 NPQVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTG----- 82 (173)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSC-----
T ss_pred CCEEEEEEEECC---ccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCC-----
Confidence 445666654321 23799999999999999999999999 4898 999999999 99999999986 45544
Q ss_pred CCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 313 tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+..|+|+ .+.++|+.+|+|||||++
T Consensus 83 ----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~g 112 (173)
T 2r99_A 83 ----------------GKSIYGKKFDDE-----NFILKHTGPGLLSMANSG 112 (173)
T ss_dssp ----------------CCBTTBSCBCCC-----CCCSCCCSSSEEEECCSS
T ss_pred ----------------CCccCCCcccCc-----ccCcccCCCcEEEEccCC
Confidence 246788888764 457899999999999975
No 20
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.86 E-value=1.1e-21 Score=176.44 Aligned_cols=97 Identities=27% Similarity=0.416 Sum_probs=78.8
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccCCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFIDPS 312 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGDp~-g~g~G~~dp~ 312 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++|||||||+. ++|.|
T Consensus 10 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g----- 81 (172)
T 2cmt_A 10 LPRVFFDIRIGN---GDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTG----- 81 (172)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSC-----
T ss_pred CCEEEEEEEECC---eecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCC-----
Confidence 345666654322 247999999999999999999999997 599 999999999 99999999986 55544
Q ss_pred CCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 313 tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+|+ .+.++|+++|+|||||++
T Consensus 82 ----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmA~~g 111 (172)
T 2cmt_A 82 ----------------GKSIYGRKFDDE-----NFQLRHEGFGVLSMANSG 111 (172)
T ss_dssp ----------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred ----------------CCccCCCccccc-----ccCcccCCceEEEEeeCC
Confidence 246788888764 457889999999999975
No 21
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.86 E-value=8.3e-22 Score=177.19 Aligned_cols=97 Identities=25% Similarity=0.368 Sum_probs=79.9
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhc--c--------CCCCceeeee-CCceEecCCCC-CCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--H--------FYDGMEIQRA-DGFVVQTGDPE-GPA 305 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--G--------fYDG~~FhRV-~gFViQgGDp~-g~g 305 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+. | ||||+.|||| ++|||||||+. ++|
T Consensus 3 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (173)
T 2igv_A 3 RSKVFFDITIGG---KASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG 79 (173)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCEEEEEEEECC---EecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCC
Confidence 346677776433 2479999999999999999999999975 6 7999999999 99999999986 555
Q ss_pred CCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 306 EGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 306 ~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
.| +.++|+.+|+|+ .+.++|+.+|+|||||++
T Consensus 80 ~g---------------------g~siyg~~f~dE-----~~~l~h~~~G~lsmAn~g 111 (173)
T 2igv_A 80 TG---------------------GESIYGEKFPDE-----NFKEKHTGPGVLSMANAG 111 (173)
T ss_dssp SC---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred CC---------------------CCccCCCcccCc-----ccccCCCCCeEEEEeeCC
Confidence 54 246788888764 457889889999999975
No 22
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.86 E-value=1.1e-21 Score=177.15 Aligned_cols=97 Identities=27% Similarity=0.388 Sum_probs=80.6
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccC--------CCCceeeee-CCceEecCCCC-CCCCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHF--------YDGMEIQRA-DGFVVQTGDPE-GPAEG 307 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~Gf--------YDG~~FhRV-~gFViQgGDp~-g~g~G 307 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+.+| |||+.|||+ ++|||||||+. ++|.|
T Consensus 10 ~~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 10 NPVVFFDVSIGG---QEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCEEEEEEEECC---eeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 456777765432 247999999999999999999999999998 999999999 99999999985 55554
Q ss_pred ccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 308 FIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 308 ~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+|+ ...++|+.+|+|||||++
T Consensus 87 ---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~g 116 (177)
T 1mzw_A 87 ---------------------VASIYRGPFADE-----NFKLRHSAPGLLSMANSG 116 (177)
T ss_dssp ---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred ---------------------CCccCCCcccCc-----ccccccCCCCEEEEccCC
Confidence 246788888774 456889899999999986
No 23
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.86 E-value=1e-21 Score=176.17 Aligned_cols=97 Identities=22% Similarity=0.340 Sum_probs=80.5
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh-ccC--------CCCceeeee-CCceEecCCCC-CCCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-RHF--------YDGMEIQRA-DGFVVQTGDPE-GPAE 306 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-~Gf--------YDG~~FhRV-~gFViQgGDp~-g~g~ 306 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++|||||||+. ++|.
T Consensus 3 ~~~v~~di~i~~---~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 3 RSKVFFDISIDN---SNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp SCEEEEEEEESS---SEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCEEEEEEeECC---EeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 346777776543 247999999999999999999999998 599 999999999 99999999985 5555
Q ss_pred CccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 307 G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
| +.++|+.+|+|+ .+.++|+.+|+|||||++
T Consensus 80 g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~g 110 (170)
T 1qng_A 80 G---------------------GESIYGRSFTDE-----NFNMKHDQPGLLSMANAG 110 (170)
T ss_dssp C---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred C---------------------CccccCCccccc-----ccccccCCCCEEEEeecC
Confidence 4 246788888764 457889899999999875
No 24
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.86 E-value=1.2e-21 Score=174.60 Aligned_cols=84 Identities=25% Similarity=0.366 Sum_probs=73.8
Q ss_pred cceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCC-CCCCCCCccCCCCCccccccccccccCC
Q 017720 254 DECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPSTEKTRTIPLEIMVEGE 328 (367)
Q Consensus 254 ~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGD-p~g~g~G~~dp~tg~~~~iPlEi~~~G~ 328 (367)
..|+|+|+||++.||+||+||++||+ +|| |||+.|||+ ++||+|||| +.+++.|
T Consensus 15 ~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g--------------------- 73 (164)
T 3pmp_A 15 PEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTG--------------------- 73 (164)
T ss_dssp EEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSC---------------------
T ss_pred EeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCC---------------------
Confidence 48999999999999999999999999 999 999999999 999999999 5555554
Q ss_pred CCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 329 KSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 329 ~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+++++ .+.++|+.+|+|||||++
T Consensus 74 g~si~g~~~~dE-----~~~l~h~~~G~lsma~~g 103 (164)
T 3pmp_A 74 GKSIYGEKFADE-----NFQVKHTKPGLLSMANAG 103 (164)
T ss_dssp CCBTTBSCBCCC-----CCCSCCCSTTEEEECBSS
T ss_pred CcccCCcccccc-----ccccCcCCCcEEEEeeCC
Confidence 246788888764 567899999999999986
No 25
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.86 E-value=1.3e-21 Score=176.84 Aligned_cols=97 Identities=23% Similarity=0.267 Sum_probs=79.9
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh-----------ccCCCCceeeee-CCceEecCCCC-CC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-----------RHFYDGMEIQRA-DGFVVQTGDPE-GP 304 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-----------~GfYDG~~FhRV-~gFViQgGDp~-g~ 304 (367)
+..|.|++...+ ...|+|+|+||++.||+||+||+.||+ .+||||+.|||| ++|||||||+. ++
T Consensus 9 ~~~vf~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 9 RPRCFFDIAINN---QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---ccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 446666665432 248999999999999999999999996 689999999999 99999999986 55
Q ss_pred CCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 305 g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.| +.++|+.+|+|+ ...++|+.+|+|||||++
T Consensus 86 g~g---------------------g~si~g~~f~dE-----~~~~~h~~~G~lsMAn~g 118 (179)
T 2wfi_A 86 GRG---------------------GESIYGGFFEDE-----SFAVKHNKEFLLSMANRG 118 (179)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred CCC---------------------CCcccCCccccc-----ccCcCcCCCeEEEEEeCC
Confidence 544 246788888874 456889999999999976
No 26
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=99.85 E-value=6.4e-22 Score=176.51 Aligned_cols=92 Identities=30% Similarity=0.410 Sum_probs=72.1
Q ss_pred eEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhccCCCCceeeee-CCceEecCCCCCCCCCccCCCCCccc
Q 017720 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRHFYDGMEIQRA-DGFVVQTGDPEGPAEGFIDPSTEKTR 317 (367)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~GfYDG~~FhRV-~gFViQgGDp~g~g~G~~dp~tg~~~ 317 (367)
..|.|+|+ .|+|+|+||++.||+||+||++||+.|||||+.|||+ ++|||||||+.+.+.+
T Consensus 4 ~~v~l~T~--------~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~~---------- 65 (167)
T 3s6m_A 4 SMVELHTN--------HGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGLKQ---------- 65 (167)
T ss_dssp CEEEEEET--------TEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTTEE----------
T ss_pred cEEEEEeC--------CceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCCCC----------
Confidence 47889998 7999999999999999999999999999999999999 9999999998754321
Q ss_pred cccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCCCCC
Q 017720 318 TIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDVSMG 366 (367)
Q Consensus 318 ~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~Pg 366 (367)
..++.+++++ ..+.+ +|.+|+|||||.+.|+
T Consensus 66 -------------~~~~~~~~~E----~~~~l-~~~~G~lsmA~~~~p~ 96 (167)
T 3s6m_A 66 -------------KPTDAPIANE----ANNGL-KNDTYTIAMARTNDPH 96 (167)
T ss_dssp -------------CCCCCCBCCC----GGGCC-CCCTTEEEECCCSSTT
T ss_pred -------------CCCCCccCCc----ccccc-cCCccEEEEecCCCCC
Confidence 0122223322 11223 4699999999976554
No 27
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.85 E-value=1.7e-21 Score=182.64 Aligned_cols=98 Identities=20% Similarity=0.281 Sum_probs=82.0
Q ss_pred CceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhcc--------CCCCceeeee-CCceEecCCCC-CCCC
Q 017720 237 GRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQRH--------FYDGMEIQRA-DGFVVQTGDPE-GPAE 306 (367)
Q Consensus 237 GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~G--------fYDG~~FhRV-~gFViQgGDp~-g~g~ 306 (367)
.+..|.|+|+..+ ...|+|+|+||++.||+||+||++||+.+ ||||+.|||| ++|||||||+. ++|.
T Consensus 58 ~~~~V~~disi~~---t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 58 SNPVVFMDINLGN---NFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp TCCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred CCcEEEEEEeECC---eecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 4667888876432 24799999999999999999999999987 7999999999 99999999985 5655
Q ss_pred CccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 307 G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
| +.++|+.+|+|+ .+.++|+++|+|||||++
T Consensus 135 G---------------------g~siyg~~f~dE-----~~~l~h~~~G~LsMAn~g 165 (229)
T 1z81_A 135 G---------------------SLSIYGEKFDDE-----NFDIKHDKEGLLSMANSG 165 (229)
T ss_dssp C---------------------CCBTTBSCCCCC-----CCCSCCCSTTEEEECCSS
T ss_pred C---------------------CCccCCCccccc-----ccccccCCCcEEEeccCC
Confidence 4 246788888774 457889999999999986
No 28
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.85 E-value=1.5e-21 Score=175.70 Aligned_cols=95 Identities=26% Similarity=0.402 Sum_probs=77.6
Q ss_pred eEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhh--hccC-CCCceeeee-CCceEecCC-CCCCCCCccCCCC
Q 017720 239 ATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV--QRHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPST 313 (367)
Q Consensus 239 atV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv--~~Gf-YDG~~FhRV-~gFViQgGD-p~g~g~G~~dp~t 313 (367)
..|.|++...+ ...|+|+|+||++.||+||+||++|| ++|| |||+.|||+ ++||||||| +.++|.|
T Consensus 12 ~~v~~di~i~~---t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g------ 82 (172)
T 2haq_A 12 AKVYFDVMIDS---EPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTG------ 82 (172)
T ss_dssp EEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSC------
T ss_pred CeEEEEEEECC---EecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCC------
Confidence 34555554322 24899999999999999999999999 7999 999999999 999999999 5566554
Q ss_pred CccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 314 EKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 314 g~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++||.+|+++ ++.++|. +|+|||||++
T Consensus 83 ---------------g~si~g~~f~dE-----~~~l~h~-~G~lsmAn~g 111 (172)
T 2haq_A 83 ---------------GKSIYGEKFADE-----NLNVKHF-VGALSMANAG 111 (172)
T ss_dssp ---------------CCCSSSSCBCCC-----CCCSCCC-TTEEEECCSS
T ss_pred ---------------CccccCCcccCc-----CCCcccC-ceEEEEccCC
Confidence 246788888764 4567887 9999999986
No 29
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.85 E-value=2.8e-22 Score=180.23 Aligned_cols=97 Identities=23% Similarity=0.316 Sum_probs=63.7
Q ss_pred EEEEeccC--CCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCC-CCCCCCCccCCCC
Q 017720 241 VDMKVKVK--DNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGD-PEGPAEGFIDPST 313 (367)
Q Consensus 241 V~~~t~~~--d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGD-p~g~g~G~~dp~t 313 (367)
|.|+++.. +......|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++||||||| +.++|.|
T Consensus 5 vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~g------ 78 (172)
T 2c3b_A 5 VFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTG------ 78 (172)
T ss_dssp EEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC--------------
T ss_pred EEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCC------
Confidence 44455443 3333457999999999999999999999999 889 999999999 999999999 6776655
Q ss_pred CccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 314 EKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 314 g~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+++ ++.++|+++|+|||||++
T Consensus 79 ---------------g~si~g~~f~dE-----~~~~~h~~~G~lsmA~~g 108 (172)
T 2c3b_A 79 ---------------GRSIYGDKFADE-----NFSRKHDKKGILSMANAG 108 (172)
T ss_dssp ----------------------------------CHHHHHTCEEEEC---
T ss_pred ---------------CcccCCCcccCc-----ccccccCCCeEEEEeeCC
Confidence 246788888874 467889999999999975
No 30
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.85 E-value=1.1e-21 Score=177.99 Aligned_cols=101 Identities=27% Similarity=0.346 Sum_probs=81.7
Q ss_pred CCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhc--c-CCCCceeeee-CCceEecCCCC-CCCC
Q 017720 232 MPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--H-FYDGMEIQRA-DGFVVQTGDPE-GPAE 306 (367)
Q Consensus 232 ~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--G-fYDG~~FhRV-~gFViQgGDp~-g~g~ 306 (367)
.|.++.++.+++++.. ...|+|+|+||++.||+||+||++||+. | ||||+.|||+ ++|||||||+. +++.
T Consensus 8 ~p~~~~~v~~di~i~~-----~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 82 (185)
T 4fru_A 8 GPKVTVKVYFDLRIGD-----EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGT 82 (185)
T ss_dssp EEEEEEEEEEEEEETT-----EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCcCcEEEEEEEECC-----EecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCC
Confidence 4666666666665532 2479999999999999999999999965 7 7999999999 99999999986 5544
Q ss_pred CccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 307 GFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 307 G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
| +.++|+..|+++ ...++|+.+|+|||||++
T Consensus 83 g---------------------g~si~g~~f~de-----~~~~~h~~~G~lsma~~g 113 (185)
T 4fru_A 83 G---------------------GKSIYGERFPDE-----NFKLKHYGPGWVSMANAG 113 (185)
T ss_dssp C---------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred C---------------------CccccCCccCcc-----ccccCcCCCeEEEEeeCC
Confidence 4 246788888764 457899999999999986
No 31
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.85 E-value=1.9e-21 Score=177.00 Aligned_cols=99 Identities=23% Similarity=0.360 Sum_probs=80.4
Q ss_pred CCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC--------CCCceeeee-CCceEecCCCC-C
Q 017720 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF--------YDGMEIQRA-DGFVVQTGDPE-G 303 (367)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf--------YDG~~FhRV-~gFViQgGDp~-g 303 (367)
..+..|.|+++..+ ...|+|+|+||++.||+||+||+.||+ +|| |||+.|||| ++|||||||+. +
T Consensus 17 ~~~~~v~~di~i~~---t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 17 QGNPVVYFDISIGQ---TPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp -CCCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCEEEEEEeECC---EecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 34567777776432 247999999999999999999999995 799 999999999 99999999985 5
Q ss_pred CCCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 304 PAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 304 ~g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+|.| +.++|+.+|+|+ .+.++|+.+|+|||||++
T Consensus 94 ~G~g---------------------g~si~g~~f~dE-----~~~l~h~~~G~lsMAn~g 127 (186)
T 2poy_A 94 DGTG---------------------GESIYGSKFRDE-----NFVYTHDAPFLLSMANAG 127 (186)
T ss_dssp SSSC---------------------CCCTTC-CBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred CCCC---------------------CCccCCCcccCc-----ccccccCCCcEEEEeeCC
Confidence 5544 246788888874 457889899999999875
No 32
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.85 E-value=2.1e-21 Score=189.09 Aligned_cols=99 Identities=22% Similarity=0.286 Sum_probs=83.4
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhhc--------c---CCCCceeeee-CCceEecCCCC-CC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQR--------H---FYDGMEIQRA-DGFVVQTGDPE-GP 304 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~~--------G---fYDG~~FhRV-~gFViQgGDp~-g~ 304 (367)
+..|.|+|++++ ...|+|+|+||++.||+||+||+.||+. | ||||+.|||| +||||||||+. ++
T Consensus 15 ~~~v~~~~~~~~---~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~ 91 (370)
T 1ihg_A 15 NPRVFFDVDIGG---ERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQN 91 (370)
T ss_dssp SCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---EecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCC
Confidence 567778887543 2479999999999999999999999987 6 7999999999 99999999997 66
Q ss_pred CCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCCCCC
Q 017720 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDVSMG 366 (367)
Q Consensus 305 g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~~Pg 366 (367)
|+| +.++||.+|+++ ...++|+.+|+|||||++ |+
T Consensus 92 g~g---------------------~~~~~~~~~~~e-----~~~~~~~~~g~l~ma~~~-~~ 126 (370)
T 1ihg_A 92 GTG---------------------GESIYGEKFEDE-----NFHYKHDKEGLLSMANAG-SN 126 (370)
T ss_dssp SSC---------------------CCBTTBSCBCCC-----CCCBCCCSTTEEEECCSS-TT
T ss_pred CCC---------------------CCCCCCCCcCCC-----cCCcCCCCCeEEEEeeCC-CC
Confidence 655 246788888875 456889999999999987 53
No 33
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.85 E-value=2.9e-21 Score=176.64 Aligned_cols=97 Identities=21% Similarity=0.310 Sum_probs=79.8
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh-----------ccCCCCceeeee-CCceEecCCCC-CC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-----------RHFYDGMEIQRA-DGFVVQTGDPE-GP 304 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-----------~GfYDG~~FhRV-~gFViQgGDp~-g~ 304 (367)
+..|.|++...+ ...|+|+|+||++.||+||+||+.||+ .+||||+.|||| ++|||||||+. ++
T Consensus 19 ~~~vf~di~i~~---t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~ 95 (192)
T 2he9_A 19 SPQCHFDIEINR---EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGN 95 (192)
T ss_dssp CCEEEEEEEETT---EEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCeEEEEEEECC---EecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCC
Confidence 446666665432 248999999999999999999999995 689999999999 99999999985 55
Q ss_pred CCCccCCCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 305 AEGFIDPSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 305 g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
|.| +.++|+.+|+|+ ...++|+.+|+|||||++
T Consensus 96 G~g---------------------g~siyg~~f~dE-----~~~l~h~~~G~lsMAn~g 128 (192)
T 2he9_A 96 GKG---------------------GESIYGGYFKDE-----NFILKHDRAFLLSMANRG 128 (192)
T ss_dssp SSC---------------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred CCC---------------------CCcccCCcccCc-----cccCCCCCCeEEEEEeCC
Confidence 544 246788888874 456889999999999976
No 34
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.84 E-value=6e-21 Score=174.55 Aligned_cols=97 Identities=26% Similarity=0.346 Sum_probs=79.1
Q ss_pred ceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCCC-CCCCCCccCCC
Q 017720 238 RATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDP-EGPAEGFIDPS 312 (367)
Q Consensus 238 ratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGDp-~g~g~G~~dp~ 312 (367)
+..|.|+++..+ ...|+|+|+||++.||+||+||++||+ +|| |||+.|||| ++||+||||+ .+++.|
T Consensus 27 ~p~v~~di~i~~---t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g----- 98 (193)
T 3k2c_A 27 SGNVYFDVYANE---ESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTG----- 98 (193)
T ss_dssp TTCEEEEEEETT---EEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSC-----
T ss_pred CCEEEEEEeECC---EEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcC-----
Confidence 445666655322 248999999999999999999999998 888 999999999 9999999995 445444
Q ss_pred CCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 313 TEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 313 tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+.+|+++ ++.++|+.+|+|||||++
T Consensus 99 ----------------g~si~g~~f~dE-----~~~l~h~~~G~lsmAn~g 128 (193)
T 3k2c_A 99 ----------------GRSIYGEKFPDE-----NFELKHTKEGILSMANCG 128 (193)
T ss_dssp ----------------CCCTTSSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred ----------------CcccCCCccccc-----ccccccCCCcEEEEEeCC
Confidence 246788888764 567899999999999986
No 35
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.83 E-value=8.4e-21 Score=172.35 Aligned_cols=99 Identities=27% Similarity=0.335 Sum_probs=79.5
Q ss_pred CCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh--ccC-CCCceeeee-CCceEecCCCC-CCCCCccC
Q 017720 236 KGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ--RHF-YDGMEIQRA-DGFVVQTGDPE-GPAEGFID 310 (367)
Q Consensus 236 ~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~--~Gf-YDG~~FhRV-~gFViQgGDp~-g~g~G~~d 310 (367)
..+..|.|+|+..+ ...|+|+|+||++.||+||+||++||+ .|| |||+.|||| ++|||||||+. +++.|
T Consensus 20 ~~~p~v~~di~i~~---~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g--- 93 (184)
T 3rdd_A 20 MVNPTVFFDIAVDG---EPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTG--- 93 (184)
T ss_dssp -CCCEEEEEEEETT---EEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSC---
T ss_pred CCCCEEEEEEeECC---EeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCC---
Confidence 34567777776432 247999999999999999999999995 466 999999999 99999999964 44444
Q ss_pred CCCCccccccccccccCCCCCCCCcchhhhhcccccCCCCCCCCeEEEeecCC
Q 017720 311 PSTEKTRTIPLEIMVEGEKSPFYGATLEELGLYKAQTKLPFNAFGTMAMARDV 363 (367)
Q Consensus 311 p~tg~~~~iPlEi~~~G~~~piyg~~~ed~G~~~~~p~Lp~~~~GtLAMArs~ 363 (367)
+.++|+..|+++ .+.++|+.+|+|||||++
T Consensus 94 ------------------g~si~g~~~~de-----~~~l~h~~~G~lsmA~~g 123 (184)
T 3rdd_A 94 ------------------GKSIYGEKFEDE-----NFILKHTGPGILSMANAG 123 (184)
T ss_dssp ------------------CCBTTBSCBCCC-----CCCSCCCSTTEEEECCSS
T ss_pred ------------------CcccCCCcccCc-----ccccccCCCcEEEEEeCC
Confidence 246788888764 457889999999999976
No 36
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.82 E-value=1.5e-20 Score=176.53 Aligned_cols=100 Identities=18% Similarity=0.256 Sum_probs=75.6
Q ss_pred cCCCCCCceEEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhhh-------------c----c--C-CCCceeee
Q 017720 231 SMPLLKGRATVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLVQ-------------R----H--F-YDGMEIQR 290 (367)
Q Consensus 231 ~~P~l~GratV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv~-------------~----G--f-YDG~~FhR 290 (367)
++|....+..|.|++...+ ...|+|+|+||++.||+||+||++||+ . | | |||+.|||
T Consensus 7 ~~p~~~~~p~v~~di~i~~---t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHR 83 (234)
T 2ose_A 7 DLPNSGKNPRVYMDIVLNN---EIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHN 83 (234)
T ss_dssp SCCCCCSSCEEEEEEEETT---EEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCE
T ss_pred ccCcCCCCCEEEEEEEECC---cccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEE
Confidence 5666677778888855322 138999999999999999999999998 3 6 8 99999999
Q ss_pred e-CCceEecCC-CCCCCCCccCCCCCccccccccccccCCCCCCCCcc-----hhhhhcccccCCCCCCCCeEEEeec
Q 017720 291 A-DGFVVQTGD-PEGPAEGFIDPSTEKTRTIPLEIMVEGEKSPFYGAT-----LEELGLYKAQTKLPFNAFGTMAMAR 361 (367)
Q Consensus 291 V-~gFViQgGD-p~g~g~G~~dp~tg~~~~iPlEi~~~G~~~piyg~~-----~ed~G~~~~~p~Lp~~~~GtLAMAr 361 (367)
| ++||||||| +.++|.|. .++||.. |+ ++.++|+++|+|||||
T Consensus 84 Vi~~FmiQgGd~~~g~G~Gg---------------------~siyg~~~~p~~f~-------~~~l~h~~~G~lsMAn 133 (234)
T 2ose_A 84 VLHNNYIVSGDIYNSNGSSA---------------------GTVYCDEPIPPVFG-------DYFYPHESKGLLSLVP 133 (234)
T ss_dssp EETTTEEEECCCC----CCC---------------------CCTTTTCCBCCCCC-------SCCCCSCSTTEEEECC
T ss_pred EECCCEEEcCCccCCCCCCC---------------------ccccCCccCccccc-------CcCccCCCCCEEEEec
Confidence 9 999999999 56766652 2455544 33 2467888999999999
No 37
>1vyk_A Oxygen-evolving enhancer protein 3; photosystem II, oxygen-enhancer evolving complex, water oxidizing complex, PSBQ, OEE3, photosynthesis; 1.49A {Spinacia oleracea} PDB: 1nze_A
Probab=95.24 E-value=0.053 Score=47.64 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=82.0
Q ss_pred cCCCCCcccccCCCCCCCHHHH-hhh-----cCC-C-CCHhHHHHhhh---HhhhhhhhhccccccChhhhhhHHHHHHH
Q 017720 85 NMAMPDVSVLISGPPIKDPGAL-LRY-----ALP-I-DNKAVREVQKP---LEDITDSLKIAGVKALDPVERNVRQASRT 153 (367)
Q Consensus 85 ~~~~~~~a~l~~g~~i~d~~a~-LR~-----alP-~-~n~~ir~iQ~~---LE~i~~~Lr~~~~k~w~~~~~~v~~a~~~ 153 (367)
+++||....||.-.-+--++-+ |.. .+| . -+..+-.|++. |.++...+-. |.|.-+...++.-+.-
T Consensus 8 ~~~~~~~~~~~g~~~~~~ard~~l~~~k~~f~~~~l~~~~a~~rIk~~a~~i~~vk~lI~k---~~W~~vrn~LR~~~~~ 84 (149)
T 1vyk_A 8 GPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDR---KAWPSLQNDLRLRASY 84 (149)
T ss_dssp CCCCCC--------------------CTTCCEECCCCHHHHHHHHHHHHHHHHTTHHHHHT---TCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcccchhhhccCccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHhhh---ccHHHHHHHHHHhHHH
Confidence 3555666677644333333332 211 111 1 12334455554 4445555544 8999999999999999
Q ss_pred HhcccchhhcccccchhHHHHHHHHHHHHhHHHHHHHHhhcCccchhHHHHHHHHHhhc
Q 017720 154 LKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGG 212 (367)
Q Consensus 154 l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd~~~~~~~~~~~L~~v~~ 212 (367)
|..+=..|..++|+++|..+.++..+|-..|++|..++..||........++++..+.+
T Consensus 85 Lr~Dl~~li~slp~~~kk~l~~La~~Lf~~le~LD~AAr~kd~~~a~~~Y~~t~~~ld~ 143 (149)
T 1vyk_A 85 LRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINE 143 (149)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777776655543
No 38
>3zsu_A TLL2057 protein, cyanoq; photosystem II assembly, photosynthesis, extrinsic protein; 1.60A {Thermosynechococcus elongatus}
Probab=93.98 E-value=0.18 Score=43.38 Aligned_cols=93 Identities=9% Similarity=0.043 Sum_probs=73.0
Q ss_pred HhHHHHhhhHhhhhhhhhccccccChhhhhhHHHHHHHHhcccchhhcccccchhHHHHHHHHHHHHhHHHHHHHHhhcC
Q 017720 116 KAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDRD 195 (367)
Q Consensus 116 ~~ir~iQ~~LE~i~~~Lr~~~~k~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~kd 195 (367)
++|.+.+++|.++...+-. |.|..+..-+..=+--|.++-..|-.++++..|.+|.++..+|...|.+|-.+...+|
T Consensus 28 ~~i~~~r~Rl~eL~~lI~~---~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~L~~LD~AA~~~n 104 (130)
T 3zsu_A 28 RDIEKNAERFADLEVSVAK---GDWQEARNIMRGPLGEMLMDMRALNRNLLAKDQPTPTALTRALTDDFLKIDQGADLDS 104 (130)
T ss_dssp HHHHHHHTTHHHHHHHHHT---TCHHHHHHHHHTHHHHHHHHHHHHHHTSCGGGSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh---cchHHHHHHHhchHHHHHHHHHHHHHhcCHhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3466667777777777765 8899887666655556666666777788899999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhh
Q 017720 196 RDAVAPKQKELLNYVG 211 (367)
Q Consensus 196 ~~~~~~~~~~~L~~v~ 211 (367)
........++++....
T Consensus 105 ~~~a~k~Y~~a~adfd 120 (130)
T 3zsu_A 105 VTVAQEGFREAEADFK 120 (130)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9888777776654444
No 39
>3ls0_A SLL1638 protein, PSBQ; photosynthesis, four helix bundle; 1.80A {Synechocystis SP} PDB: 3ls1_A
Probab=92.12 E-value=0.21 Score=43.13 Aligned_cols=93 Identities=10% Similarity=0.154 Sum_probs=66.3
Q ss_pred HhHHHHhhhHhh-hhhhhhccccccChhhhhhHHHHHHHHhcccchhhcccccchhHHHHHHHHHHHHhHHHHHHHHhhc
Q 017720 116 KAVREVQKPLED-ITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVEDR 194 (367)
Q Consensus 116 ~~ir~iQ~~LE~-i~~~Lr~~~~k~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~~k 194 (367)
++|.+.+++|++ +...+-. |.|..+..-+..=+--|.++-..|-.++.+..|++|.++..+|...|++|-.+...+
T Consensus 30 ~~i~~ar~Rl~e~L~~lI~~---~~W~~~Rn~IhGPlg~lr~~m~~l~~~Llp~dqk~A~~lak~l~~~L~~LD~AA~~~ 106 (133)
T 3ls0_A 30 NPIAVARDGMEKRLQGLIAD---QNWVDTQTYIHGPLGQLRRDMLGLASSLLPKDQDKAKTLAKEVFGHLERLDAAAKDR 106 (133)
T ss_dssp HHHHHHHHHHHHTHHHHHHT---TCHHHHHHHHHTTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHHHHHHhhh---cchHHHHHHHhchHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346667777777 7666665 888877644333333333333445557777777899999999999999999999999
Q ss_pred CccchhHHHHHHHHHhh
Q 017720 195 DRDAVAPKQKELLNYVG 211 (367)
Q Consensus 195 d~~~~~~~~~~~L~~v~ 211 (367)
|........++++....
T Consensus 107 n~~~a~k~Y~~a~adfd 123 (133)
T 3ls0_A 107 NGSQAKIQYQEALADFD 123 (133)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99888777777655444
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=39.50 E-value=9.1 Score=23.69 Aligned_cols=16 Identities=38% Similarity=0.638 Sum_probs=13.6
Q ss_pred HHHHHHhhhccCCCCc
Q 017720 271 AGNFVDLVQRHFYDGM 286 (367)
Q Consensus 271 a~NFv~Lv~~GfYDG~ 286 (367)
-.||-.-.++|||||.
T Consensus 3 wknfwsslrkgfydge 18 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHhhcccch
Confidence 4689888999999985
No 41
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=33.41 E-value=29 Score=30.15 Aligned_cols=31 Identities=16% Similarity=0.188 Sum_probs=25.7
Q ss_pred EEEEEeccCCCCCccceeEEEEEcCCCCchhHHHHHHhh
Q 017720 240 TVDMKVKVKDNPNVDECVFRIVLDGYNAPVTAGNFVDLV 278 (367)
Q Consensus 240 tV~~~t~~~d~~~~~~G~I~IeLdg~~AP~Ta~NFv~Lv 278 (367)
.+.|++. ...++++|+...||.||..|+++-
T Consensus 31 ~I~i~~~--------~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 31 RLRIRFE--------SAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp CEEEEET--------TEEEEECCCTTSCHHHHHHHHHTC
T ss_pred EEEEEEC--------CEEEEEEEcCCCCHHHHHHHHHhC
Confidence 4555564 478999999999999999999876
No 42
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=32.28 E-value=1.1e+02 Score=25.78 Aligned_cols=68 Identities=10% Similarity=0.098 Sum_probs=38.0
Q ss_pred HhHHHHhhhHhhhhhhhhccccccChhhhhhHHHHHHHHhcccchhhcccccchhHHHHHHHHHHHHhHHHHHHHHh--h
Q 017720 116 KAVREVQKPLEDITDSLKIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHGMELLQKLEAGMDELQQIVE--D 193 (367)
Q Consensus 116 ~~ir~iQ~~LE~i~~~Lr~~~~k~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~~l~~~l~~l~~~~~--~ 193 (367)
.--.+||++|..+...++. |..+.++-+.+. ..-+. ..+..-+..|.+|+..|++|++.|. .
T Consensus 31 ~Vk~EVq~sl~~l~~l~~~-----w~~l~~~~~~~s-------~~E~~----~~~~EL~~~l~sie~dLeDLe~sI~ivE 94 (130)
T 4dnd_A 31 VVRGEVQKAVNTARGLYQR-----WCELLQESAAVG-------REELD----WTTNELRNGLRSIEWDLEDLEETIGIVE 94 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----HHHC----------------CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHhhccCCCcc-------hHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3356888888888776653 655544432110 01111 1233445678888999999998766 4
Q ss_pred cCccch
Q 017720 194 RDRDAV 199 (367)
Q Consensus 194 kd~~~~ 199 (367)
+|+.+|
T Consensus 95 ~np~kF 100 (130)
T 4dnd_A 95 ANPGKF 100 (130)
T ss_dssp HCHHHH
T ss_pred hCHHhc
Confidence 676554
No 43
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=26.99 E-value=67 Score=29.04 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=25.6
Q ss_pred EEEEEeccCCCCCccce-eEEEEEcCCCCchhHHHHHHhh
Q 017720 240 TVDMKVKVKDNPNVDEC-VFRIVLDGYNAPVTAGNFVDLV 278 (367)
Q Consensus 240 tV~~~t~~~d~~~~~~G-~I~IeLdg~~AP~Ta~NFv~Lv 278 (367)
.+++++.. .| +++.+|..+.||.||+.|.++-
T Consensus 23 ~i~itl~~-------~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLEK-------RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEETT-------TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEec-------CCeEEEEEEccccChHHHHHHHHhC
Confidence 56666652 45 4899999999999999999976
No 44
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=25.83 E-value=2.5e+02 Score=22.25 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=15.2
Q ss_pred chhHHHHHHHHHHHHhHHHHHHHHh
Q 017720 168 SKKEHGMELLQKLEAGMDELQQIVE 192 (367)
Q Consensus 168 ~~~~~~~~l~~~l~~~l~~l~~~~~ 192 (367)
..+..-+..+.+|++.|.+|.+.|.
T Consensus 36 ~~~~El~~~l~el~e~l~DL~~SI~ 60 (95)
T 2c5k_T 36 DQEEEIQDILKDVEETIVDLDRSII 60 (95)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555666666777766665443
No 45
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=23.96 E-value=1.9e+02 Score=28.92 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=55.7
Q ss_pred HHHhhhcCCCCCHhHHHHhhhHhhhhhhh----------hccccccChhhhhhHHHHHHHHhcccchhhcccccchhHHH
Q 017720 104 GALLRYALPIDNKAVREVQKPLEDITDSL----------KIAGVKALDPVERNVRQASRTLKQGKSLIVEGLAESKKEHG 173 (367)
Q Consensus 104 ~a~LR~alP~~n~~ir~iQ~~LE~i~~~L----------r~~~~k~w~~~~~~v~~a~~~l~~~~~~il~~vp~~~~~~~ 173 (367)
..||++--++ .++|.++...|++|++.= +.--.++=..+.. -..++++..+++|+ .+.+-
T Consensus 27 d~L~kye~~V-~~~l~~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q~~~~~----n~~~~~q~Skkml~-----~~~~~ 96 (411)
T 3ghg_C 27 DFLSTYQTKV-DKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPN----MIDAATLKSRKMLE-----EIMKY 96 (411)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTCCCTT----CHHHHHHHHHHHHH-----HHHHH
T ss_pred HHHHHhccch-hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhccccCCCCc----chhhHHHHHHHHHH-----HHHHH
Confidence 5688888888 568999999998875522 1100000000001 11223333333333 23344
Q ss_pred HHHHHHHHHhHHHHHHHHhhcCccchhHHHHHHHHHhhchhhhcc
Q 017720 174 MELLQKLEAGMDELQQIVEDRDRDAVAPKQKELLNYVGGVEEDMV 218 (367)
Q Consensus 174 ~~l~~~l~~~l~~l~~~~~~kd~~~~~~~~~~~L~~v~~lE~~~v 218 (367)
+.+|......|..||.+++..+. +.+++...|..|+...-
T Consensus 97 ~~~~~~~~~~i~~l~~~~~~~~~-----~i~~L~~~v~~l~~~~~ 136 (411)
T 3ghg_C 97 EASILTHDSSIRYLQEIYNSNNQ-----KIVNLKEKVAQLEAQCQ 136 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHTTSC
T ss_pred HHHHHhhHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhc
Confidence 77888888888899988765532 33555666666666543
No 46
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=20.70 E-value=53 Score=27.07 Aligned_cols=86 Identities=19% Similarity=0.227 Sum_probs=54.8
Q ss_pred hhhcCCCCCHhHHHHhhhHhhhhhhhhcccc--cc-----Chhhhh-hHHHHHHHHhcccchhhcccccchhHHHHHHHH
Q 017720 107 LRYALPIDNKAVREVQKPLEDITDSLKIAGV--KA-----LDPVER-NVRQASRTLKQGKSLIVEGLAESKKEHGMELLQ 178 (367)
Q Consensus 107 LR~alP~~n~~ir~iQ~~LE~i~~~Lr~~~~--k~-----w~~~~~-~v~~a~~~l~~~~~~il~~vp~~~~~~~~~l~~ 178 (367)
|=..+=++...+-.+=+.||+-.+--|.+.. || ..+-.. -+.++......-.+.+++.++++.+..-..++.
T Consensus 52 La~~l~~~~~tvs~~v~~Le~~GlV~R~~~~~DrR~~~l~LT~~G~~~~~~~~~~~~~~~~~~~~~l~~ee~~~l~~~L~ 131 (151)
T 4aik_A 52 LAKAIGIEQPSLVRTLDQLEEKGLITRHTSANDRRAKRIKLTEQSSPIIEQVDGVISSTRKEILGGISSDEIAVLSGLID 131 (151)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECGGGHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHhCCCeEeecCCCCCcchhhhcCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4556677888888888888886555444322 11 111111 134444555556677889999999999889999
Q ss_pred HHHHhHHHHHHHHh
Q 017720 179 KLEAGMDELQQIVE 192 (367)
Q Consensus 179 ~l~~~l~~l~~~~~ 192 (367)
.|.+.|.+++.-++
T Consensus 132 kl~~nl~~l~~k~E 145 (151)
T 4aik_A 132 KLEKNIIQLQTKLE 145 (151)
T ss_dssp HHHHHHHHCC----
T ss_pred HHHHHHHHHHHhhh
Confidence 99888888766544
No 47
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=20.38 E-value=1.9e+02 Score=24.26 Aligned_cols=18 Identities=17% Similarity=0.221 Sum_probs=8.2
Q ss_pred HHHHHHHHhHHHHHHHHh
Q 017720 175 ELLQKLEAGMDELQQIVE 192 (367)
Q Consensus 175 ~l~~~l~~~l~~l~~~~~ 192 (367)
.+-.+|+..|+.++.-++
T Consensus 67 ~~~~EL~~~l~sie~dLe 84 (130)
T 4dnd_A 67 WTTNELRNGLRSIEWDLE 84 (130)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444555555444433
Done!