BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017724
(367 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT84|U496M_ARATH UPF0496 protein At3g19330 OS=Arabidopsis thaliana GN=At3g19330 PE=2
SV=2
Length = 382
Score = 278 bits (710), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 229/370 (61%), Gaps = 25/370 (6%)
Query: 1 MLQCPSINASSASSSI-------PGAAGNSTDGSPSSSVQQSPTFNLTQAYL-SIQTTSY 52
M C S N +S +S+ P S + + SPTFNL++ + QT SY
Sbjct: 1 MRNCLSFNPASPEASLGDDPLPHPSLESGVASTSRNDASISSPTFNLSRELAHAFQTPSY 60
Query: 53 HEILSRIRILDPHYRNHDQNQVEQQVEEINEDKDPD-QLLLSQVLRPNRESVKEALRLVK 111
H++ SR+ ++ D Q+ ++ + PD +LLLSQVL+PN+E V+EA+R VK
Sbjct: 61 HDVRSRVHVVV------DLTQIHHRLIQ------PDIELLLSQVLQPNKECVQEAIRHVK 108
Query: 112 VNSLSDLFSTSFDHSEKTTNLCLQLLKSLFCIRT-LYAPVCELLDNFPLDH-HSVTQSQC 169
+L++L ST F HSE T LCL L +++ R LY P+ +L + FP D ++ +S C
Sbjct: 109 QTTLTNLVSTYFQHSEDATRLCLNLYQNVHSARHHLYTPLLDLFNIFPGDSLPAIDESLC 168
Query: 170 DNAFEVFLQFDSLHNPFHSPDSRKFHEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGS 229
D AF+VFL+ D+ NPF SP+S F + CFS LK LD+ L+KSRSRV + +ATAGS
Sbjct: 169 DLAFDVFLKLDTFENPFSSPESYSFRDTQLCFSQLKHNLDRRLRKSRSRVRLIHHATAGS 228
Query: 230 SVCIIGTAVGVTIATVGVATHA--IFAIFAGPLCTACFPCALTKKELANAAQLDAARKGA 287
S+C++ V V + V +A+HA I + AGPLC+ P + +KEL N QL+AA KG
Sbjct: 229 SLCLVAAVVAVAASAVVIASHALPILLVVAGPLCSPYLPHSFKRKELTNICQLNAASKGT 288
Query: 288 YVLNKCLDTIDRLVARLCTAIEGDKQLVRLGLGGGKEKHSIQEVVKQLRKNQPNFASLLK 347
+VLNK LDTIDRLV+RL T IE DK L+RLGL G++ HSIQE++K LRK+ LK
Sbjct: 289 FVLNKDLDTIDRLVSRLHTGIEYDKFLIRLGLERGRDVHSIQEILKLLRKSHLPLTHQLK 348
Query: 348 DLEEHICLCF 357
DLE+HICL F
Sbjct: 349 DLEDHICLWF 358
>sp|Q9LJK4|U496L_ARATH UPF0496 protein At3g19250 OS=Arabidopsis thaliana GN=At3g19250 PE=2
SV=1
Length = 360
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 208/351 (59%), Gaps = 26/351 (7%)
Query: 14 SSIPGAAGNSTDGSPSSSVQQSPTFNLTQAYL-SIQTTSYHEILSRIRILDPHYRNHDQN 72
+S G+ G+ PS + TFNL+ + QT SYH+I SR+ ++DP
Sbjct: 10 ASPEGSLGDDHLPHPSPEGSVASTFNLSHELAHAFQTPSYHDIRSRLLVIDP-------- 61
Query: 73 QVEQQVEEINEDKDPDQLLLSQVLRPNRESVKEALRL--VKVNSLSDLFSTSFDHSEKTT 130
++ +E L LSQ LRPN ESV+EAL L K +L++L ST F HSE T
Sbjct: 62 -TQENLE----------LFLSQELRPNNESVQEALSLRHAKQTTLTNLVSTYFQHSEDAT 110
Query: 131 NLCLQLLKSLFCIR-TLYAPVCELLDNFPLDHHS-VTQSQCDNAFEVFLQFDSLHNPFHS 188
CL L +++ R LY P+ +L + FP D HS + +S C+ AF+VFL+ D+ NPF S
Sbjct: 111 RFCLNLYQNVHSARCHLYTPLLDLFNIFPRDSHSAIDESFCNLAFDVFLKLDTFENPFAS 170
Query: 189 PDSRKFHEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCIIGTAVGVTIATVGVA 248
P+S F + CF L KLD ++KS+SRV L +ATAGS++C++ V V + +A
Sbjct: 171 PESHSFQDTQLCFYQLADKLDTRIRKSKSRVRLLHHATAGSALCLVTAVVVVAASAAFIA 230
Query: 249 THAIFAIF--AGPLCTACFPCALTKKELANAAQLDAARKGAYVLNKCLDTIDRLVARLCT 306
HA+ I AGPLCT P + KKEL+N QL+ A KG + LNK LDTIDRLV+RL T
Sbjct: 231 YHALPTILVVAGPLCTPYLPHSFKKKELSNIFQLNVAAKGTFALNKDLDTIDRLVSRLHT 290
Query: 307 AIEGDKQLVRLGLGGGKEKHSIQEVVKQLRKNQPNFASLLKDLEEHICLCF 357
++ DK L+RLGL G++ ++I E VKQLRK+ N L+ L +HIC F
Sbjct: 291 GVKNDKLLIRLGLERGRDVYTIPEFVKQLRKSHVNHTHQLEVLVDHICRWF 341
>sp|A2XCJ1|U496C_ORYSI UPF0496 protein 3 OS=Oryza sativa subsp. indica GN=OsI_009784 PE=3
SV=2
Length = 378
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 154/360 (42%), Gaps = 52/360 (14%)
Query: 28 PSSSVQQSPTFNLTQAYLS-IQTTSYHEILSRI--------RILDPHYRNHDQNQVEQQV 78
P V S +F+ + Y S +T SY++ +R+ L P + +++
Sbjct: 22 PKKVVAPSSSFDFREEYTSAFRTESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRL 81
Query: 79 EEINEDKDPDQLLLSQVLRPNRESVKEALRLVKVNSLS----DLFSTSFDHSEKTTNLCL 134
+L +L P++ +V AL + + L L + + + + LC
Sbjct: 82 PSY-------RLFAEHLLEPDQRAVAAALASPRGSRLRPDVRGLLAAYYAETANASFLCS 134
Query: 135 QLLKSLFCIRTLYAPVCELLDNFPLDHHSVTQSQCDNAFEVFLQFDSLHNPFHS--PDSR 192
LLK + IR Y P+ L D + A L PF +
Sbjct: 135 HLLKDIEHIRLRYRPLKHTLRKLASDVGVSGLADVSAA---------LGQPFTALAASQG 185
Query: 193 KFHEMHRCFSDLKQKLDKNLQKSRSR---VCFLRYATAGSSVCIIGTAVGVTIATVGVAT 249
+ E+ DL + LD +K+R R V LR A + S V + V A +GV
Sbjct: 186 RLREVQAGSGDLLRGLDAGRKKARHRIRSVARLRRALSVSFVTAVAVVA-VVGACIGVHI 244
Query: 250 HAIFAIFAGPLCTACFPCALTKKELANAA------QLDAARKGAYVLNKCLDTIDRLVAR 303
A FA F P+ + P L ++ + A QL+AA KG Y+LN+ ++TI RLVAR
Sbjct: 245 LAAFAAF--PMMS---PAWLGERFFSGRAARRALVQLEAAAKGTYILNRDMETISRLVAR 299
Query: 304 LCTAIEGDKQLVRL------GLGGGKEKHSIQEVVKQLRKNQPNFASLLKDLEEHICLCF 357
+ E L+RL G G + +QEV++QL KN+ +F L +LEEH+ LCF
Sbjct: 300 VRDEGEHMVALLRLCVEHRPAAGAGGKGRLVQEVLRQLSKNEESFRQQLDELEEHLFLCF 359
>sp|Q9SMU4|U496N_ARATH UPF0496 protein At3g49070 OS=Arabidopsis thaliana GN=At3g49070 PE=2
SV=1
Length = 416
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 18/274 (6%)
Query: 89 QLLLSQVLRPNRESVKEALRLVKVNSLS-DLFSTSFDHSEKTTNLCLQLLKSLFCIRTLY 147
+L +L P+ ++ L + +V + L S F + LC QLLK++ +R+ Y
Sbjct: 123 RLFAHNLLDPDLNTITRILDVSRVGRHTRTLLSDYFLETANAFLLCTQLLKNIHHLRSKY 182
Query: 148 APVCELLDNFPLDHHSVTQSQCDNAFEVFLQFDSLHNPFHSPDSRKFHEMHRCFSDLKQK 207
L F ++H+ + + D E+ FD PF S SR C LK +
Sbjct: 183 E---SLKPKFHSENHN-SLALIDQFTEISKWFD----PFISSGSRIQLIRSGCLYLLK-R 233
Query: 208 LDKNLQKSRSRVCFLRYATAGSSVCIIGTAVGVTIATVGVATHAIFAIFAGP--LCTACF 265
L+ K+R+++ + T S + T V +A+HA A P L +
Sbjct: 234 LESRRDKTRAKLKLINGLTHSSGLL---VLALTTTLIVTIASHAFALFLAAPTLLASQFK 290
Query: 266 PCALTKKELANAAQLDAARKGAYVLNKCLDTIDRLVARLCTAIEGDKQLVR--LGLGGGK 323
P L K AA+LD A KG Y+L++ LDTI RLV R+ + + + +G G G+
Sbjct: 291 PAGLRNKLTKTAARLDVAAKGTYILSRDLDTISRLVTRINDEVNHVRAMAEFWVGRGSGR 350
Query: 324 EKHSIQEVVKQLRKNQPNFASLLKDLEEHICLCF 357
+ S +EV ++L++ + +F+ L +LEEHI LCF
Sbjct: 351 VRGS-EEVARELKRCEESFSEELDELEEHIYLCF 383
>sp|Q10RR9|U496C_ORYSJ UPF0496 protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0148000
PE=2 SV=1
Length = 378
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 153/360 (42%), Gaps = 52/360 (14%)
Query: 28 PSSSVQQSPTFNLTQAYLS-IQTTSYHEILSRI--------RILDPHYRNHDQNQVEQQV 78
P V S +F+ + Y S +T SY++ +R+ L P + +++
Sbjct: 22 PKKVVAPSSSFDFREEYTSAFRTESYNDFWARVLDITLAHGAALVPRHGGGGGCAASKRL 81
Query: 79 EEINEDKDPDQLLLSQVLRPNRESVKEALRLVKVNSLS----DLFSTSFDHSEKTTNLCL 134
+L +L P++ +V AL + + L L + + + + LC
Sbjct: 82 PSY-------RLFAEHLLEPDQRAVAAALASPRGSRLRPDVRGLLAAYYAETANASFLCS 134
Query: 135 QLLKSLFCIRTLYAPVCELLDNFPLDHHSVTQSQCDNAFEVFLQFDSLHNPFHS--PDSR 192
LLK + IR Y P+ L D + A L PF +
Sbjct: 135 HLLKDIEHIRLRYRPLKHTLRKLASDVGVSGLADVSAA---------LGQPFTALAASQG 185
Query: 193 KFHEMHRCFSDLKQKLDKNLQKSRSR---VCFLRYATAGSSVCIIGTAVGVTIATVGVAT 249
+ E+ DL + LD +K+R R V LR A + S V + V A +GV
Sbjct: 186 RLREVQAGSGDLLRGLDAGRKKARHRIRSVARLRRALSVSFVTAVAVVA-VVGACIGVHI 244
Query: 250 HAIFAIFAGPLCTACFPCALTKKELANAA------QLDAARKGAYVLNKCLDTIDRLVAR 303
A FA F P+ + P L ++ + A QL+AA KG Y+LN+ ++TI RLVAR
Sbjct: 245 LAAFAAF--PMMS---PAWLGERFFSGRAARRALVQLEAAAKGTYILNRDMETISRLVAR 299
Query: 304 LCTAIEGDKQLVRL------GLGGGKEKHSIQEVVKQLRKNQPNFASLLKDLEEHICLCF 357
+ E L RL G G + +QEV++QL KN+ +F L +LEEH+ LCF
Sbjct: 300 VRDEGEHMVALRRLCVEHRPAAGAGGKGRLVQEVLRQLSKNEESFRQQLDELEEHLFLCF 359
>sp|Q6DYE5|U496K_ARATH UPF0496 protein At1g20180 OS=Arabidopsis thaliana GN=At1g20180 PE=2
SV=2
Length = 390
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 23/271 (8%)
Query: 109 LVKVNSLSDLFSTSFDHSEKTTNLCLQLLKSLFCIRTLYAPVCELLD------NFPLDHH 162
L++ +SL +L T FD S + ++C LL+ L I+ + + ++ N
Sbjct: 102 LMQDSSLDNLIVTFFDLSSEACDVCETLLQCLQQIKINHNKIKRVMKIGKRVCNGAKTLE 161
Query: 163 SVTQSQCDNAFEVFLQFDSLHNPF-HSPDSRKFHEMHRCFSDLKQKLDKNLQKSRSRVCF 221
+ C F+ +F +L NP + +F +H SDL KL ++ R ++ F
Sbjct: 162 CSPEMLCALIFQELSRFAALKNPLCRIVNEAQFRIVHDANSDLLTKLTSKKRRIRRKIRF 221
Query: 222 LRYATAGSSVCIIGTAVGVTIATVGVATHAIFAIFAGP-LCTACFPCALTKKELAN---- 276
++ ++ T + I + +A H+I +FA P L C C L KK+
Sbjct: 222 FKFCKKLGGYSLVITHSAIVITLLIIALHSILGVFAAPALLGLCSFCLLRKKKAKGRMHK 281
Query: 277 ----------AAQLDAARKGAYVLNKCLDTIDRLVARLCTAIEGDKQLVRLGLGGGKEKH 326
Q+D A KG ++L LDT+ RL RLC IE K + + ++
Sbjct: 282 SNKDTTLEKLGTQIDIAAKGMFILINDLDTLSRLAGRLCDEIEHRKTVAAM-CAKSRKIE 340
Query: 327 SIQEVVKQLRKNQPNFASLLKDLEEHICLCF 357
++E +++ ++ F+ L++LEEH+ LCF
Sbjct: 341 VLKEALREFNGHEEKFSDQLQELEEHLYLCF 371
>sp|A2YH25|U496B_ORYSI Putative UPF0496 protein 2 OS=Oryza sativa subsp. indica
GN=OsI_023618 PE=3 SV=2
Length = 408
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 277 AAQLDAARKGAYVLNKCLDTIDRLVARLCTAIEGDKQLVRLGLGGGKEKHSIQEVVKQLR 336
A LDAA +GAY++ + LDT+ R+V R +E + + R+ + G E+ +QEV ++
Sbjct: 291 GATLDAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVAREEE 350
Query: 337 KNQPNFASLLKDLEEHICLCF 357
+ + + + L +LEEH+CLC
Sbjct: 351 ECEEDLRAQLAELEEHVCLCL 371
>sp|Q5Z8N6|U496B_ORYSJ Putative UPF0496 protein 2 OS=Oryza sativa subsp. japonica
GN=Os06g0718300 PE=3 SV=1
Length = 408
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 277 AAQLDAARKGAYVLNKCLDTIDRLVARLCTAIEGDKQLVRLGLGGGKEKHSIQEVVKQLR 336
A LDAA +GAY++ + LDT+ R+V R +E + + R+ + G E+ +QEV ++
Sbjct: 291 GATLDAAARGAYIVGRDLDTVSRMVRRAHDELEHGRDVARIAMRGHGERPLLQEVAREEE 350
Query: 337 KNQPNFASLLKDLEEHICLCF 357
+ + + + L +LEEH+CLC
Sbjct: 351 ECEEDLRAQLAELEEHVCLCL 371
>sp|B4MY75|EIF3M_DROWI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
willistoni GN=Tango7 PE=3 SV=1
Length = 387
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QCD EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCDQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL++S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLERSSKVMIELLGTYTADNACV 200
>sp|Q8CDV0|CC178_MOUSE Coiled-coil domain-containing protein 178 OS=Mus musculus
GN=Ccdc178 PE=2 SV=2
Length = 866
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 47 IQTTSYHEILSRIRILDPHYRNHDQNQVEQQVEEINEDKDPDQLLLSQVLRPNRESVKEA 106
I TSY + L ++ +LD HY +E +N D + D+ +++VLR + + E
Sbjct: 334 INATSYEKELDKLSVLDAHYTT--------SIETVNLDIEGDEEAMNEVLRETQSTTNEL 385
Query: 107 LRLVK-VNSLSDLFSTSFDHSEKTTNLCLQLLKSLFCIRTLY 147
L K V+ L LF K N L+ + + ++ +
Sbjct: 386 ENLKKTVDDLKRLFDQYCWRQRKYENEYLEAFSNFYSLKKTW 427
>sp|P14727|AVRB3_XANEU Avirulence protein AvrBs3 OS=Xanthomonas euvesicatoria GN=avrBs3
PE=1 SV=2
Length = 1164
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 291 NKCLDTIDRLVARLCTAIEG--DKQLVRLGLGGGKEKHSIQEVVKQLRKNQPNFASLLKD 348
+ L+T+ RL+ LC A G +Q+V + GG + +++ +V QL + P A+L D
Sbjct: 848 KQALETVQRLLPVLCQA-HGLTPQQVVAIASNGGG-RPALESIVAQLSRPDPALAALTND 905
Query: 349 -LEEHICLCFRPSF 361
L CL RP+
Sbjct: 906 HLVALACLGGRPAL 919
>sp|B4LJT9|EIF3M_DROVI Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
virilis GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QCD EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCDQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
>sp|B4KT65|EIF3M_DROMO Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
mojavensis GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QCD EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCDQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
>sp|B3MCZ5|EIF3M_DROAN Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
ananassae GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QCD EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCDQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
>sp|B4JW83|EIF3M_DROGR Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
grimshawi GN=Tango7 PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QCD EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCDQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
>sp|Q6BN00|IML1_DEBHA Vacuolar membrane-associated protein IML1 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=IML1 PE=3 SV=2
Length = 1560
Score = 33.5 bits (75), Expect = 2.6, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 99/245 (40%), Gaps = 43/245 (17%)
Query: 1 MLQCPSINASSASSSIPGAAGNSTDGSPSSSVQQSPTFNLTQAYLSIQTTSYHEILSRIR 60
++ PSI A S + + + + + + P T+ + + + SR
Sbjct: 712 VVHAPSIRADSRKGVKENVSRDRKEFNEITRTKLRPRLQKTEEFYKSDDSVSNTSKSR-D 770
Query: 61 ILDPHYRN-HDQNQVEQQVEEINEDKDPDQLLLSQVLRPNRESVKEALRLVKVNSLSDLF 119
ILD RN +VE++ E + LL +++ P++ES + L ++++ +D+F
Sbjct: 771 ILDSKSRNKQSSTKVEEEFETLT------NLLWTEIRNPSKESHSDMLSFLRLSRWNDIF 824
Query: 120 STSFDHSEKTTNLCLQLLKSLFCIRTLYAPVCELLDN--FPLDHHSVTQSQCDNAFEVFL 177
+N+ +L+K R+ +P + FP S Q + D +F+++
Sbjct: 825 P---------SNIKRRLVK----WRSFESPAALPVTTSIFP----STKQLETDYSFQIYS 867
Query: 178 QFDSLHNPFHSPDSRKFHEMHR-------------CFSDLKQKLDKNLQKSRSRVCFLRY 224
F + N + H++ R C+SD +K + + + + ++Y
Sbjct: 868 VFLNSENDLEIEST---HDLMREMIQLRLLLGFQICYSDQVKKFESSRKPGGNAESLIKY 924
Query: 225 ATAGS 229
GS
Sbjct: 925 FPKGS 929
>sp|P26003|NSS_TSWVL Non-structural protein NS-S OS=Tomato spotted wilt virus (strain
Bulgarian L3) GN=NSS PE=3 SV=1
Length = 467
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 35/193 (18%)
Query: 50 TSYHEILSRIRILDPHYRNHDQ--------NQVEQQVEEINEDKDPDQLLLSQ-VLRPNR 100
T Y++ L ++ +L P+ H+ NQVE +N L+ ++ + PN
Sbjct: 174 TCYNQALGKVNVLSPNRNVHEWLYSFKPSFNQVESNNRTVNSLAVKSLLMSAENNIMPNS 233
Query: 101 ESVKEA-----------LRLVKV---NSLSDLFSTSFDHSEKTTNLCLQLLKSLFCIRTL 146
++ +A LR+ KV S+ LF + D + KT L S+ CI
Sbjct: 234 QAFVKASTDSHFKLSLWLRVPKVLKQVSIQKLFKVAGDETNKTFYL------SIVCIPN- 286
Query: 147 YAPVCELLDNFPLDHHSVTQSQCDNAFEVFLQFDSLHNPF---HSPD--SRKFHEMHRCF 201
+ V L+ + H + +C FE+ + F L P+ H P R H +
Sbjct: 287 HNSVETALNISVICKHQLPIRKCKAPFELSMMFSDLKEPYNIVHDPSYPQRIVHALLETH 346
Query: 202 SDLKQKLDKNLQK 214
+ Q L NLQ+
Sbjct: 347 TSFAQVLCNNLQE 359
>sp|B4P6M6|EIF3M_DROYA Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
yakuba GN=Tango7 PE=2 SV=1
Length = 387
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QC+ EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
>sp|B3NRC6|EIF3M_DROER Eukaryotic translation initiation factor 3 subunit M OS=Drosophila
erecta GN=Tango7 PE=3 SV=1
Length = 387
Score = 32.0 bits (71), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 142 CIRTLYAPVCELLDNFPLDHHSV-----TQSQCDNAFEVFLQFDSLHNPFHS--PDSRKF 194
C+++L+ L PL +H QC+ EVF D L + F + P S +
Sbjct: 104 CLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFTGVDQLKSQFANCPPSSEQM 163
Query: 195 HEMHRCFSDLKQKLDKNLQKSRSRVCFLRYATAGSSVCI 233
+++R D+ + D NL+ S + L + C+
Sbjct: 164 QKLYRLLHDVTK--DTNLELSSKVMIELLGTYTADNACV 200
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,773,735
Number of Sequences: 539616
Number of extensions: 4906501
Number of successful extensions: 19578
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 19486
Number of HSP's gapped (non-prelim): 107
length of query: 367
length of database: 191,569,459
effective HSP length: 119
effective length of query: 248
effective length of database: 127,355,155
effective search space: 31584078440
effective search space used: 31584078440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)