estExt_Genewise1_v1.C_LG_IX3694 protein (Populus trichocarpa)

STRING 9.05

estExt_Genewise1_v1.C_LG_IX3694 protein (Populus trichocarpa) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	estExt_Genewise1_v1.C_LG_IX3694	serine--glyoxylate transaminase (EC-2.6.1.45) (401 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00010922	SubName- Full=Putative uncharacterized protein; (335 aa)	•	•		0.917
	SHMT6	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (472 aa)		•	•	0.917
	SHMT1	RecName- Full=Serine hydroxymethyltransferase; EC=2.1.2.1;; Interconversion of serine and glyci [...] (472 aa)		•	•	0.917
	SHMT8	serine hydroxymethyltransferase 8 (EC-2.1.2.1); Interconversion of serine and glycine (By simil [...] (530 aa)		•	•	0.915
	SHMT3	precursor of transferase serine hydroxymethyltransferase 3 (EC-2.1.2.1); Interconversion of ser [...] (516 aa)		•	•	0.914
	SHMT2	precursor of transferase serine hydroxymethyltransferase 2 (EC-2.1.2.1); Interconversion of ser [...] (518 aa)		•	•	0.913
	SHMT7	precursor of transferase serine hydroxymethyltransferase 7 (EC-2.1.2.1); Interconversion of ser [...] (521 aa)		•	•	0.913
	SHMT5	serine hydroxymethyltransferase 5 (EC-2.1.2.1); Interconversion of serine and glycine (By simil [...] (552 aa)		•	•	0.910
	SHMT4	serine hydroxymethyltransferase 4 (EC-2.1.2.1); Interconversion of serine and glycine (By simil [...] (555 aa)		•	•	0.910
	estExt_fgenesh4_pg.C_280257	threonine deaminase (EC-4.3.1.19) (543 aa)	•	•		0.908

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: very high (>100%)

Permalink