Query 017726
Match_columns 367
No_of_seqs 144 out of 1876
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 02:53:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017726.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017726hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0075 Serine-pyruvate aminot 100.0 6.7E-52 1.5E-56 363.6 41.0 347 10-361 6-352 (383)
2 PLN02409 serine--glyoxylate am 100.0 1.2E-50 2.5E-55 372.6 41.6 358 1-360 1-360 (401)
3 KOG2862 Alanine-glyoxylate ami 100.0 2.4E-47 5.1E-52 314.5 35.1 354 1-360 10-369 (385)
4 COG0520 csdA Selenocysteine ly 100.0 1.1E-45 2.5E-50 334.4 34.0 344 8-365 22-400 (405)
5 cd06451 AGAT_like Alanine-glyo 100.0 1.5E-42 3.2E-47 315.9 40.4 349 11-365 1-352 (356)
6 TIGR02326 transamin_PhnW 2-ami 100.0 5.5E-42 1.2E-46 312.6 41.1 342 9-359 3-349 (363)
7 PF00266 Aminotran_5: Aminotra 100.0 2.4E-42 5.2E-47 315.8 37.1 343 10-361 1-370 (371)
8 PRK13479 2-aminoethylphosphona 100.0 2E-41 4.3E-46 309.7 41.8 352 5-365 1-358 (368)
9 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 1.7E-40 3.7E-45 302.6 39.7 346 11-365 1-352 (355)
10 PRK10874 cysteine sulfinate de 100.0 4.3E-40 9.2E-45 304.1 34.0 337 7-361 18-387 (401)
11 TIGR03392 FeS_syn_CsdA cystein 100.0 4.9E-40 1.1E-44 303.4 34.1 335 8-360 16-383 (398)
12 PRK09295 bifunctional cysteine 100.0 8.4E-40 1.8E-44 302.3 34.2 340 9-365 24-399 (406)
13 PLN02855 Bifunctional selenocy 100.0 1.2E-39 2.6E-44 302.8 32.6 339 9-360 33-406 (424)
14 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.6E-38 3.4E-43 291.7 33.6 337 11-361 2-368 (376)
15 PLN02651 cysteine desulfurase 100.0 3.5E-39 7.7E-44 293.9 29.0 325 10-359 1-363 (364)
16 PRK03080 phosphoserine aminotr 100.0 6.2E-39 1.4E-43 292.4 30.1 330 11-360 14-361 (378)
17 TIGR01979 sufS cysteine desulf 100.0 9E-38 1.9E-42 289.0 34.4 343 9-365 19-396 (403)
18 PRK05355 3-phosphoserine/phosp 100.0 1E-37 2.2E-42 281.4 30.5 331 9-365 3-353 (360)
19 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.3E-37 2.7E-42 287.6 31.2 334 9-361 18-392 (397)
20 cd06453 SufS_like Cysteine des 100.0 2.6E-37 5.6E-42 283.2 32.6 336 10-361 1-368 (373)
21 COG1104 NifS Cysteine sulfinat 100.0 3.1E-37 6.7E-42 268.9 31.0 326 9-359 2-364 (386)
22 TIGR01366 serC_3 phosphoserine 100.0 1.5E-36 3.2E-41 274.5 31.0 330 10-360 4-348 (361)
23 TIGR03402 FeS_nifS cysteine de 100.0 1.3E-36 2.8E-41 278.9 31.1 327 10-361 1-361 (379)
24 PRK02948 cysteine desulfurase; 100.0 2.7E-36 5.8E-41 277.0 31.1 326 10-359 2-361 (381)
25 TIGR01365 serC_2 phosphoserine 100.0 7.9E-36 1.7E-40 267.2 30.9 331 12-361 6-362 (374)
26 TIGR03403 nifS_epsilon cystein 100.0 3.2E-35 7E-40 269.9 33.2 327 10-360 1-363 (382)
27 cd00611 PSAT_like Phosphoserin 100.0 2.4E-35 5.2E-40 266.8 30.7 331 11-365 1-351 (355)
28 COG0436 Aspartate/tyrosine/aro 100.0 9.6E-36 2.1E-40 270.3 26.4 325 9-364 29-385 (393)
29 TIGR02006 IscS cysteine desulf 100.0 3.6E-35 7.9E-40 270.8 30.4 329 8-361 3-366 (402)
30 PLN02452 phosphoserine transam 100.0 6.9E-35 1.5E-39 261.3 29.5 325 9-359 7-350 (365)
31 TIGR01364 serC_1 phosphoserine 100.0 5E-34 1.1E-38 256.1 31.2 321 19-365 2-343 (349)
32 TIGR03235 DNA_S_dndA cysteine 100.0 2.8E-34 6.1E-39 260.9 28.6 308 11-340 1-324 (353)
33 PRK12462 phosphoserine aminotr 100.0 1.4E-33 3E-38 249.7 31.4 331 8-364 3-356 (364)
34 TIGR01814 kynureninase kynuren 100.0 4.9E-34 1.1E-38 263.6 29.8 340 7-360 26-395 (406)
35 PLN02724 Molybdenum cofactor s 100.0 2.4E-33 5.3E-38 276.7 31.7 324 9-339 35-420 (805)
36 PRK14012 cysteine desulfurase; 100.0 1.1E-32 2.4E-37 254.5 29.5 325 9-360 4-367 (404)
37 PRK07681 aspartate aminotransf 100.0 5.5E-32 1.2E-36 249.5 30.8 322 10-364 34-382 (399)
38 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.2E-31 2.7E-36 245.8 30.5 323 18-365 30-376 (387)
39 PRK09276 LL-diaminopimelate am 100.0 1.2E-31 2.6E-36 246.5 30.2 301 19-351 44-369 (385)
40 PRK07324 transaminase; Validat 100.0 7.1E-32 1.5E-36 246.1 28.1 297 22-353 45-353 (373)
41 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2E-31 4.3E-36 242.8 30.7 326 16-366 9-358 (361)
42 COG0079 HisC Histidinol-phosph 100.0 1.7E-31 3.7E-36 238.3 29.6 311 16-366 32-350 (356)
43 PLN03026 histidinol-phosphate 100.0 2.3E-31 5.1E-36 243.2 31.0 309 17-366 63-378 (380)
44 PRK06207 aspartate aminotransf 100.0 1.5E-31 3.3E-36 246.5 29.8 304 16-352 50-384 (405)
45 TIGR03540 DapC_direct LL-diami 100.0 2E-31 4.3E-36 244.9 30.2 301 19-351 42-367 (383)
46 PRK09105 putative aminotransfe 100.0 3.9E-31 8.4E-36 240.7 29.3 307 16-366 53-366 (370)
47 COG1168 MalY Bifunctional PLP- 100.0 1.5E-30 3.2E-35 222.7 30.6 310 18-357 37-373 (388)
48 PRK05942 aspartate aminotransf 100.0 3.6E-31 7.8E-36 243.7 29.1 311 20-365 49-384 (394)
49 PLN00175 aminotransferase fami 100.0 3.6E-31 7.7E-36 244.3 28.5 302 20-352 68-395 (413)
50 PRK07682 hypothetical protein; 100.0 3.4E-31 7.4E-36 242.9 27.2 301 20-352 34-358 (378)
51 KOG1549 Cysteine desulfurase N 100.0 4.8E-31 1E-35 230.9 26.6 285 8-314 43-345 (428)
52 PRK05957 aspartate aminotransf 100.0 1.3E-30 2.8E-35 239.5 30.4 301 18-352 39-366 (389)
53 PRK06108 aspartate aminotransf 100.0 8E-31 1.7E-35 241.1 29.0 312 10-352 26-364 (382)
54 PRK08960 hypothetical protein; 100.0 6.3E-31 1.4E-35 241.7 28.2 303 19-352 45-369 (387)
55 PRK02769 histidine decarboxyla 100.0 1.5E-30 3.4E-35 235.0 30.0 316 8-359 22-359 (380)
56 PRK04870 histidinol-phosphate 100.0 1E-30 2.2E-35 237.9 28.8 309 16-366 36-354 (356)
57 KOG0257 Kynurenine aminotransf 100.0 1.9E-31 4.2E-36 230.4 22.6 315 19-364 44-413 (420)
58 TIGR03537 DapC succinyldiamino 100.0 1E-30 2.3E-35 237.0 28.4 300 19-352 13-335 (350)
59 PRK06348 aspartate aminotransf 100.0 2E-30 4.4E-35 237.9 30.1 301 20-351 43-366 (384)
60 PRK07309 aromatic amino acid a 100.0 1.3E-30 2.9E-35 239.6 28.8 305 20-353 44-371 (391)
61 PRK08068 transaminase; Reviewe 100.0 1.5E-30 3.3E-35 239.2 29.3 299 21-351 47-370 (389)
62 PRK08361 aspartate aminotransf 100.0 7.4E-31 1.6E-35 241.5 26.7 302 20-352 47-372 (391)
63 TIGR01141 hisC histidinol-phos 100.0 1.3E-30 2.8E-35 236.5 27.7 307 17-363 30-344 (346)
64 PRK02731 histidinol-phosphate 100.0 2.3E-30 4.9E-35 236.6 29.5 318 9-366 33-362 (367)
65 PRK03158 histidinol-phosphate 100.0 1.3E-30 2.8E-35 237.5 27.2 308 17-366 40-357 (359)
66 PRK01533 histidinol-phosphate 100.0 7.9E-31 1.7E-35 238.2 25.6 304 16-366 39-351 (366)
67 PRK05166 histidinol-phosphate 100.0 2.5E-30 5.4E-35 236.2 28.5 317 9-365 37-366 (371)
68 PRK07366 succinyldiaminopimela 100.0 4.1E-30 8.8E-35 236.5 29.4 303 18-353 42-373 (388)
69 PRK08912 hypothetical protein; 100.0 2.9E-30 6.3E-35 237.4 28.4 302 20-353 40-369 (387)
70 PRK06290 aspartate aminotransf 100.0 8.7E-30 1.9E-34 234.5 31.4 310 19-365 57-400 (410)
71 PRK09147 succinyldiaminopimela 100.0 4E-30 8.6E-35 237.1 29.0 301 19-354 42-380 (396)
72 PRK14807 histidinol-phosphate 100.0 9.1E-30 2E-34 230.8 30.7 307 17-366 33-348 (351)
73 PRK13520 L-tyrosine decarboxyl 100.0 1.5E-29 3.3E-34 231.8 32.4 316 13-359 25-358 (371)
74 PRK15481 transcriptional regul 100.0 2.5E-30 5.4E-35 240.8 27.4 309 22-364 101-425 (431)
75 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1E-29 2.3E-34 231.8 30.5 322 18-365 18-363 (370)
76 PRK05764 aspartate aminotransf 100.0 8.8E-30 1.9E-34 234.9 29.6 307 21-359 46-380 (393)
77 PRK05387 histidinol-phosphate 100.0 6.1E-30 1.3E-34 232.7 27.8 309 17-366 35-349 (353)
78 cd06450 DOPA_deC_like DOPA dec 100.0 1.7E-30 3.8E-35 235.7 24.1 300 18-366 9-344 (345)
79 TIGR03812 tyr_de_CO2_Arch tyro 100.0 3.6E-29 7.8E-34 229.5 32.3 299 38-366 55-372 (373)
80 PRK13355 bifunctional HTH-doma 100.0 7.5E-30 1.6E-34 242.0 28.6 304 19-352 162-496 (517)
81 PRK08636 aspartate aminotransf 100.0 2.5E-29 5.5E-34 232.0 31.3 304 20-351 47-381 (403)
82 PTZ00433 tyrosine aminotransfe 100.0 1.2E-29 2.6E-34 234.8 29.0 303 19-352 50-390 (412)
83 TIGR03538 DapC_gpp succinyldia 100.0 1.1E-29 2.5E-34 233.8 28.6 311 19-364 41-389 (393)
84 PLN00145 tyrosine/nicotianamin 100.0 1.4E-29 3.1E-34 234.5 29.1 309 18-352 68-406 (430)
85 PRK12414 putative aminotransfe 100.0 1.3E-29 2.7E-34 232.6 28.4 301 19-353 42-370 (384)
86 PRK01688 histidinol-phosphate 100.0 1.5E-29 3.1E-34 229.2 28.1 280 44-364 59-350 (351)
87 cd00378 SHMT Serine-glycine hy 100.0 2.6E-29 5.6E-34 232.5 29.5 325 8-365 19-380 (402)
88 PRK08153 histidinol-phosphate 100.0 1.7E-29 3.6E-34 230.4 27.7 311 17-366 43-361 (369)
89 PRK09148 aminotransferase; Val 100.0 2.1E-29 4.5E-34 232.5 28.1 303 19-351 43-371 (405)
90 PTZ00377 alanine aminotransfer 100.0 4.7E-29 1E-33 234.6 30.6 308 16-351 85-456 (481)
91 TIGR01264 tyr_amTase_E tyrosin 100.0 3.4E-29 7.3E-34 231.3 29.1 303 18-353 47-382 (401)
92 PRK08056 threonine-phosphate d 100.0 3.1E-29 6.7E-34 227.8 28.3 305 16-366 30-351 (356)
93 PRK06225 aspartate aminotransf 100.0 5.4E-29 1.2E-33 228.4 30.1 315 16-365 38-371 (380)
94 PRK07777 aminotransferase; Val 100.0 3E-29 6.5E-34 230.6 28.4 300 21-352 39-368 (387)
95 cd06454 KBL_like KBL_like; thi 100.0 9.1E-29 2E-33 224.8 31.2 326 3-365 3-346 (349)
96 PRK07683 aminotransferase A; V 100.0 5E-29 1.1E-33 228.8 29.3 300 19-352 41-365 (387)
97 PRK07908 hypothetical protein; 100.0 6.5E-29 1.4E-33 225.2 29.7 304 16-366 32-343 (349)
98 PRK09082 methionine aminotrans 100.0 6.1E-29 1.3E-33 228.3 29.8 301 20-352 44-371 (386)
99 PRK00950 histidinol-phosphate 100.0 2.5E-29 5.3E-34 229.4 26.6 313 9-366 35-358 (361)
100 PRK07550 hypothetical protein; 100.0 5.9E-29 1.3E-33 228.6 28.9 302 19-352 42-368 (386)
101 PRK08363 alanine aminotransfer 100.0 5.7E-29 1.2E-33 229.5 28.6 307 19-353 46-377 (398)
102 PRK07337 aminotransferase; Val 100.0 5.1E-29 1.1E-33 229.2 27.5 303 19-352 43-371 (388)
103 PRK07392 threonine-phosphate d 100.0 1.6E-28 3.4E-33 223.6 30.0 307 16-365 32-354 (360)
104 PLN02187 rooty/superroot1 100.0 1.5E-28 3.3E-33 229.1 29.8 306 19-353 83-421 (462)
105 TIGR01788 Glu-decarb-GAD gluta 100.0 3.1E-28 6.7E-33 222.9 31.2 318 17-355 50-412 (431)
106 TIGR01265 tyr_nico_aTase tyros 100.0 1.1E-28 2.4E-33 227.8 28.5 303 19-352 48-383 (403)
107 cd00613 GDC-P Glycine cleavage 100.0 2.7E-28 5.9E-33 225.5 30.5 309 40-362 62-394 (398)
108 PRK09265 aminotransferase AlaT 100.0 2.1E-28 4.5E-33 226.1 29.4 306 19-353 49-384 (404)
109 PRK03321 putative aminotransfe 100.0 1.1E-28 2.5E-33 224.1 26.9 306 17-366 33-347 (352)
110 PF00155 Aminotran_1_2: Aminot 100.0 6.6E-29 1.4E-33 226.9 25.4 311 19-360 18-357 (363)
111 PRK03317 histidinol-phosphate 100.0 2E-28 4.3E-33 223.7 28.0 307 16-365 36-359 (368)
112 PRK04781 histidinol-phosphate 100.0 3.8E-28 8.2E-33 220.9 29.6 285 44-366 61-359 (364)
113 TIGR01822 2am3keto_CoA 2-amino 100.0 8.8E-28 1.9E-32 221.7 32.2 282 41-360 82-377 (393)
114 PRK08175 aminotransferase; Val 100.0 3E-28 6.6E-33 224.4 28.8 301 21-351 44-370 (395)
115 PTZ00094 serine hydroxymethylt 100.0 1.7E-28 3.6E-33 228.8 27.2 333 8-365 34-403 (452)
116 PLN03032 serine decarboxylase; 100.0 4.4E-28 9.4E-33 217.4 28.6 313 9-356 24-360 (374)
117 PLN02656 tyrosine transaminase 100.0 2.9E-28 6.3E-33 225.1 28.4 303 18-352 47-385 (409)
118 PRK04635 histidinol-phosphate 100.0 1.6E-28 3.4E-33 223.0 26.1 279 44-366 62-351 (354)
119 PRK02610 histidinol-phosphate 100.0 4.7E-28 1E-32 221.4 29.3 298 17-352 39-354 (374)
120 PRK00011 glyA serine hydroxyme 100.0 4.1E-28 8.8E-33 225.3 29.4 325 8-365 25-384 (416)
121 PRK07590 L,L-diaminopimelate a 100.0 2.2E-28 4.9E-33 226.1 27.0 317 19-359 47-400 (409)
122 PRK07568 aspartate aminotransf 100.0 4.3E-28 9.4E-33 224.0 28.8 303 18-354 42-376 (397)
123 PRK14809 histidinol-phosphate 100.0 4.5E-28 9.8E-33 220.4 28.4 311 9-364 31-351 (357)
124 TIGR01437 selA_rel uncharacter 100.0 5.5E-28 1.2E-32 219.0 28.5 318 14-366 19-361 (363)
125 PRK06107 aspartate aminotransf 100.0 5.1E-28 1.1E-32 223.3 28.0 302 20-353 47-383 (402)
126 PRK06855 aminotransferase; Val 100.0 8.2E-28 1.8E-32 223.3 29.1 306 18-352 47-410 (433)
127 PLN00143 tyrosine/nicotianamin 100.0 6.6E-28 1.4E-32 222.6 28.2 310 18-353 48-387 (409)
128 PLN02450 1-aminocyclopropane-1 100.0 6.5E-28 1.4E-32 225.3 28.1 282 42-352 86-411 (468)
129 PLN02231 alanine transaminase 100.0 1.7E-27 3.7E-32 224.3 30.9 320 9-355 130-512 (534)
130 cd00609 AAT_like Aspartate ami 100.0 1.3E-27 2.9E-32 217.2 29.0 317 17-365 9-349 (350)
131 PRK06358 threonine-phosphate d 100.0 1.9E-27 4.1E-32 215.6 29.1 303 17-366 30-351 (354)
132 PRK07179 hypothetical protein; 100.0 4.1E-27 8.9E-32 217.7 31.5 313 5-360 58-386 (407)
133 PLN02376 1-aminocyclopropane-1 100.0 1.1E-27 2.3E-32 224.5 27.6 282 42-352 94-419 (496)
134 COG1167 ARO8 Transcriptional r 100.0 2.5E-27 5.3E-32 220.2 29.6 290 37-359 127-442 (459)
135 TIGR00858 bioF 8-amino-7-oxono 100.0 8.1E-27 1.8E-31 213.0 32.7 303 20-360 31-353 (360)
136 TIGR03542 DAPAT_plant LL-diami 100.0 1E-27 2.3E-32 221.2 26.7 307 19-356 46-390 (402)
137 PLN02672 methionine S-methyltr 100.0 4.3E-27 9.3E-32 231.4 32.0 317 16-364 707-1074(1082)
138 PRK06425 histidinol-phosphate 100.0 3.1E-27 6.6E-32 212.5 28.5 275 43-366 41-329 (332)
139 cd06502 TA_like Low-specificit 100.0 3.7E-27 8.1E-32 213.3 28.3 308 16-359 6-328 (338)
140 PRK13392 5-aminolevulinate syn 100.0 9.4E-27 2E-31 215.5 31.4 321 8-365 53-392 (410)
141 PLN02483 serine palmitoyltrans 100.0 1.3E-26 2.9E-31 217.0 32.6 319 7-360 106-454 (489)
142 PRK05839 hypothetical protein; 100.0 2E-27 4.4E-32 217.1 26.3 291 19-352 37-356 (374)
143 PRK06836 aspartate aminotransf 100.0 2.6E-27 5.7E-32 218.0 26.8 304 19-351 46-372 (394)
144 TIGR03576 pyridox_MJ0158 pyrid 100.0 2E-26 4.4E-31 206.7 31.0 306 6-366 24-343 (346)
145 PRK04366 glycine dehydrogenase 100.0 1.9E-26 4.1E-31 216.0 31.7 330 17-365 79-443 (481)
146 PRK13238 tnaA tryptophanase/L- 100.0 1.3E-26 2.9E-31 214.6 29.5 315 19-365 58-428 (460)
147 PLN02721 threonine aldolase 100.0 1.2E-26 2.6E-31 211.2 28.6 308 20-365 18-347 (353)
148 PRK14808 histidinol-phosphate 100.0 1.1E-26 2.4E-31 208.8 27.3 295 16-366 29-333 (335)
149 PRK05958 8-amino-7-oxononanoat 100.0 8.9E-26 1.9E-30 208.0 33.0 307 20-365 54-382 (385)
150 PLN02607 1-aminocyclopropane-1 100.0 2E-26 4.2E-31 213.7 28.3 283 42-352 95-418 (447)
151 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.9E-26 4.1E-31 207.2 27.3 268 44-364 49-329 (330)
152 TIGR01821 5aminolev_synth 5-am 100.0 6.1E-26 1.3E-30 209.7 31.2 318 6-360 50-384 (402)
153 PRK00451 glycine dehydrogenase 100.0 2.9E-26 6.3E-31 214.6 29.3 308 40-366 110-444 (447)
154 TIGR03799 NOD_PanD_pyr putativ 100.0 8.9E-26 1.9E-30 210.8 31.6 312 36-365 123-517 (522)
155 PRK03967 histidinol-phosphate 100.0 1.8E-26 4E-31 207.8 25.9 295 17-365 29-329 (337)
156 PRK06939 2-amino-3-ketobutyrat 100.0 1.4E-25 2.9E-30 207.6 32.1 302 20-358 57-379 (397)
157 TIGR03539 DapC_actino succinyl 100.0 3.5E-26 7.6E-31 207.8 27.3 286 19-352 34-344 (357)
158 PRK09275 aspartate aminotransf 100.0 2.9E-26 6.3E-31 213.1 25.1 316 20-352 114-498 (527)
159 TIGR01825 gly_Cac_T_rel pyrido 100.0 4.7E-25 1E-29 203.0 32.4 281 41-360 77-369 (385)
160 PRK09064 5-aminolevulinate syn 100.0 4.1E-25 8.8E-30 204.6 32.0 316 8-360 53-385 (407)
161 PLN02414 glycine dehydrogenase 100.0 8E-26 1.7E-30 222.1 28.5 306 40-361 566-896 (993)
162 KOG0259 Tyrosine aminotransfer 100.0 2E-25 4.4E-30 190.0 26.9 313 19-355 78-418 (447)
163 PLN02822 serine palmitoyltrans 100.0 5.5E-25 1.2E-29 205.7 32.7 316 9-360 117-465 (481)
164 PRK07865 N-succinyldiaminopime 100.0 6.5E-26 1.4E-30 206.8 25.7 287 20-353 41-351 (364)
165 PRK06959 putative threonine-ph 100.0 1.5E-25 3.2E-30 201.8 27.4 267 45-366 56-329 (339)
166 PRK05664 threonine-phosphate d 99.9 4.6E-25 9.9E-30 198.2 29.9 266 45-366 52-324 (330)
167 PRK13393 5-aminolevulinate syn 99.9 1.3E-24 2.8E-29 201.0 32.3 318 6-360 50-384 (406)
168 PTZ00376 aspartate aminotransf 99.9 2.5E-25 5.5E-30 205.4 26.9 293 37-365 67-398 (404)
169 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.4E-25 1.6E-29 199.4 29.3 296 42-361 18-346 (352)
170 PRK13580 serine hydroxymethylt 99.9 1.2E-24 2.6E-29 198.3 30.1 312 9-352 50-421 (493)
171 PRK10534 L-threonine aldolase; 99.9 4.7E-25 1E-29 198.9 27.1 294 20-356 12-317 (333)
172 PRK09440 avtA valine--pyruvate 99.9 1.6E-25 3.4E-30 207.9 24.5 294 38-364 70-405 (416)
173 PRK11658 UDP-4-amino-4-deoxy-L 99.9 4.3E-25 9.4E-30 201.6 26.6 293 20-337 12-323 (379)
174 TIGR03801 asp_4_decarbox aspar 99.9 2.7E-25 5.8E-30 206.4 25.2 275 62-352 157-497 (521)
175 PRK09028 cystathionine beta-ly 99.9 3.1E-24 6.6E-29 194.4 31.5 283 42-364 61-382 (394)
176 PRK09257 aromatic amino acid a 99.9 7.5E-25 1.6E-29 201.9 28.0 307 22-365 47-393 (396)
177 PLN03226 serine hydroxymethylt 99.9 3.7E-24 8E-29 198.8 31.9 324 9-350 35-393 (475)
178 COG0156 BioF 7-keto-8-aminopel 99.9 5E-24 1.1E-28 189.8 31.2 318 6-361 44-379 (388)
179 PLN02590 probable tyrosine dec 99.9 7E-25 1.5E-29 204.5 26.8 343 8-364 131-523 (539)
180 PRK06767 methionine gamma-lyas 99.9 1E-24 2.2E-29 199.4 27.4 283 42-363 61-379 (386)
181 PRK08354 putative aminotransfe 99.9 3.9E-24 8.4E-29 190.6 29.8 281 21-366 22-308 (311)
182 PLN02271 serine hydroxymethylt 99.9 5.1E-24 1.1E-28 194.8 30.9 330 9-351 149-515 (586)
183 PLN02368 alanine transaminase 99.9 5.7E-25 1.2E-29 201.3 25.0 250 37-313 102-395 (407)
184 PRK13034 serine hydroxymethylt 99.9 3.6E-24 7.8E-29 197.3 30.1 325 9-365 29-387 (416)
185 PLN02880 tyrosine decarboxylas 99.9 8.1E-25 1.7E-29 204.2 25.5 331 8-357 83-468 (490)
186 PRK07504 O-succinylhomoserine 99.9 3.4E-24 7.4E-29 196.2 28.0 283 42-364 65-390 (398)
187 PRK08045 cystathionine gamma-s 99.9 2.4E-24 5.1E-29 196.1 26.7 283 42-364 52-377 (386)
188 PLN02263 serine decarboxylase 99.9 8.3E-24 1.8E-28 192.3 30.1 282 40-356 131-427 (470)
189 COG3844 Kynureninase [Amino ac 99.9 2.3E-24 5.1E-29 180.0 24.2 304 37-360 71-390 (407)
190 PRK08861 cystathionine gamma-s 99.9 6.3E-24 1.4E-28 192.7 29.3 282 42-363 53-377 (388)
191 PRK05937 8-amino-7-oxononanoat 99.9 1E-23 2.2E-28 192.4 30.9 312 4-360 7-338 (370)
192 cd00615 Orn_deC_like Ornithine 99.9 5.4E-25 1.2E-29 194.4 21.4 224 40-290 57-293 (294)
193 TIGR01329 cysta_beta_ly_E cyst 99.9 4.5E-24 9.7E-29 194.3 27.9 280 42-363 47-369 (378)
194 COG1932 SerC Phosphoserine ami 99.9 6.8E-24 1.5E-28 181.3 26.8 330 6-359 2-350 (365)
195 PRK08637 hypothetical protein; 99.9 5.5E-24 1.2E-28 195.5 28.4 315 13-352 14-367 (388)
196 PRK08776 cystathionine gamma-s 99.9 9.2E-24 2E-28 193.3 29.5 213 42-292 60-277 (405)
197 COG0076 GadB Glutamate decarbo 99.9 3.9E-24 8.4E-29 196.3 26.8 310 8-335 62-401 (460)
198 cd00617 Tnase_like Tryptophana 99.9 5.3E-24 1.1E-28 194.6 27.3 314 19-364 33-402 (431)
199 PRK08133 O-succinylhomoserine 99.9 1.1E-23 2.5E-28 192.4 29.6 284 41-364 60-385 (390)
200 PLN03227 serine palmitoyltrans 99.9 4.2E-23 9E-28 189.0 33.3 325 6-360 3-370 (392)
201 TIGR01324 cysta_beta_ly_B cyst 99.9 2.8E-23 6E-28 188.3 31.5 282 42-363 50-370 (377)
202 PRK06234 methionine gamma-lyas 99.9 5.2E-24 1.1E-28 195.3 27.0 287 41-363 63-391 (400)
203 PLN02242 methionine gamma-lyas 99.9 4.6E-24 1E-28 195.8 26.7 251 41-326 75-346 (418)
204 PRK05968 hypothetical protein; 99.9 3.7E-24 7.9E-29 195.6 25.6 283 41-363 62-380 (389)
205 TIGR03588 PseC UDP-4-keto-6-de 99.9 7.9E-24 1.7E-28 194.0 27.9 321 21-359 9-369 (380)
206 TIGR02080 O_succ_thio_ly O-suc 99.9 7.2E-24 1.6E-28 192.8 27.3 282 42-363 51-375 (382)
207 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.2E-23 2.6E-28 191.9 28.7 283 41-364 53-377 (380)
208 PRK08249 cystathionine gamma-s 99.9 2.4E-23 5.2E-28 190.3 29.6 284 41-364 63-388 (398)
209 cd00614 CGS_like CGS_like: Cys 99.9 1.1E-23 2.5E-28 191.7 27.3 214 41-292 39-257 (369)
210 PRK08064 cystathionine beta-ly 99.9 9.8E-24 2.1E-28 192.8 26.1 280 41-364 53-377 (390)
211 PRK06460 hypothetical protein; 99.9 1.5E-23 3.4E-28 190.6 27.1 284 41-364 44-369 (376)
212 TIGR01328 met_gam_lyase methio 99.9 2.5E-23 5.3E-28 190.1 28.3 217 42-294 59-280 (391)
213 PRK08114 cystathionine beta-ly 99.9 7.3E-23 1.6E-27 184.8 29.1 285 41-363 61-387 (395)
214 PLN02397 aspartate transaminas 99.9 6E-23 1.3E-27 190.1 29.3 307 22-365 69-416 (423)
215 TIGR02379 ECA_wecE TDP-4-keto- 99.9 3.6E-23 7.9E-28 188.0 27.1 295 20-338 9-321 (376)
216 PRK08574 cystathionine gamma-s 99.9 6.7E-23 1.5E-27 186.7 28.9 214 41-292 52-269 (385)
217 PRK07811 cystathionine gamma-s 99.9 4.4E-23 9.6E-28 188.4 27.6 283 42-364 61-383 (388)
218 PRK07810 O-succinylhomoserine 99.9 1.2E-22 2.6E-27 186.0 30.4 235 42-314 70-323 (403)
219 PRK05967 cystathionine beta-ly 99.9 6.9E-23 1.5E-27 185.2 28.0 283 41-363 63-385 (395)
220 PRK08247 cystathionine gamma-s 99.9 2E-23 4.4E-28 189.6 24.7 230 41-313 51-287 (366)
221 PRK07582 cystathionine gamma-l 99.9 7.7E-23 1.7E-27 185.5 28.4 275 41-364 50-360 (366)
222 PRK07503 methionine gamma-lyas 99.9 8.4E-23 1.8E-27 187.3 28.7 219 41-295 64-287 (403)
223 PLN02955 8-amino-7-oxononanoat 99.9 2.4E-22 5.1E-27 183.2 30.3 311 4-360 105-449 (476)
224 COG1103 Archaea-specific pyrid 99.9 5.8E-23 1.3E-27 167.4 23.3 330 10-364 17-374 (382)
225 COG0112 GlyA Glycine/serine hy 99.9 8.6E-23 1.9E-27 175.8 24.9 311 9-352 27-366 (413)
226 PF00464 SHMT: Serine hydroxym 99.9 1E-22 2.2E-27 181.8 26.3 312 9-351 21-380 (399)
227 PRK07671 cystathionine beta-ly 99.9 1.4E-22 3E-27 184.3 27.6 282 41-364 49-373 (377)
228 PRK08134 O-acetylhomoserine am 99.9 7.5E-23 1.6E-27 188.3 26.1 159 41-214 63-224 (433)
229 PRK07050 cystathionine beta-ly 99.9 3E-22 6.6E-27 183.0 29.4 284 41-364 64-386 (394)
230 PRK08248 O-acetylhomoserine am 99.9 1.3E-22 2.7E-27 186.9 26.8 159 41-214 63-224 (431)
231 PRK07049 methionine gamma-lyas 99.9 1.4E-22 3E-27 186.8 26.8 290 42-364 83-421 (427)
232 TIGR00461 gcvP glycine dehydro 99.9 1.4E-22 3E-27 197.1 27.9 313 40-365 528-862 (939)
233 cd00610 OAT_like Acetyl ornith 99.9 2E-22 4.4E-27 187.3 27.8 308 20-359 53-402 (413)
234 PLN02509 cystathionine beta-ly 99.9 2E-22 4.4E-27 185.7 27.4 281 42-364 133-456 (464)
235 PRK06176 cystathionine gamma-s 99.9 2.2E-22 4.7E-27 183.0 26.5 213 41-292 49-266 (380)
236 PRK04311 selenocysteine syntha 99.9 4.1E-22 8.9E-27 183.7 28.2 289 8-328 86-425 (464)
237 PRK06702 O-acetylhomoserine am 99.9 3.3E-22 7.2E-27 182.7 26.8 299 41-364 60-419 (432)
238 PRK05939 hypothetical protein; 99.9 4.2E-22 9.2E-27 181.8 26.7 160 41-215 46-207 (397)
239 COG0399 WecE Predicted pyridox 99.9 5.8E-22 1.3E-26 175.2 26.5 290 20-333 13-311 (374)
240 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 7.1E-22 1.5E-26 180.5 27.2 274 41-337 30-319 (375)
241 PRK07269 cystathionine gamma-s 99.9 5E-22 1.1E-26 179.5 25.6 277 41-364 53-359 (364)
242 TIGR00474 selA seryl-tRNA(sec) 99.9 6.2E-22 1.3E-26 182.0 26.4 289 8-328 81-420 (454)
243 PRK05613 O-acetylhomoserine am 99.9 1.1E-21 2.3E-26 180.5 27.1 163 41-217 68-234 (437)
244 PRK03244 argD acetylornithine 99.9 2.5E-21 5.3E-26 178.9 29.4 275 42-359 85-381 (398)
245 PRK05994 O-acetylhomoserine am 99.9 3.8E-21 8.3E-26 177.4 30.4 158 42-214 63-223 (427)
246 PRK07812 O-acetylhomoserine am 99.9 1.1E-21 2.4E-26 180.3 26.6 159 42-214 69-230 (436)
247 PF00282 Pyridoxal_deC: Pyrido 99.9 3.3E-22 7.1E-27 180.7 22.5 294 9-313 41-372 (373)
248 PLN02414 glycine dehydrogenase 99.9 2.7E-21 5.9E-26 190.4 30.6 305 19-360 116-457 (993)
249 KOG0634 Aromatic amino acid am 99.9 2.5E-21 5.3E-26 168.0 26.5 288 38-352 96-447 (472)
250 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 3.1E-21 6.7E-26 178.0 29.0 161 41-216 56-219 (418)
251 KOG0256 1-aminocyclopropane-1- 99.9 1.6E-21 3.4E-26 167.9 24.3 297 43-364 122-455 (471)
252 PRK06084 O-acetylhomoserine am 99.9 1.3E-21 2.8E-26 180.1 25.5 161 41-216 57-221 (425)
253 PRK05367 glycine dehydrogenase 99.9 4.9E-21 1.1E-25 189.5 29.8 286 40-361 119-431 (954)
254 COG2008 GLY1 Threonine aldolas 99.9 5.5E-21 1.2E-25 163.9 25.8 307 19-360 11-331 (342)
255 TIGR00707 argD acetylornithine 99.9 6.8E-21 1.5E-25 175.0 28.4 283 41-365 68-376 (379)
256 PRK05367 glycine dehydrogenase 99.9 6.9E-21 1.5E-25 188.4 29.0 303 40-360 540-863 (954)
257 PF01041 DegT_DnrJ_EryC1: DegT 99.9 5.3E-21 1.2E-25 173.9 26.0 271 41-338 24-310 (363)
258 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 8.9E-21 1.9E-25 171.0 26.8 283 41-363 54-381 (386)
259 PRK00854 rocD ornithine--oxo-a 99.9 1.4E-20 3.1E-25 174.0 28.7 294 21-360 59-389 (401)
260 PRK12566 glycine dehydrogenase 99.9 1.3E-20 2.9E-25 182.2 28.1 311 38-361 539-865 (954)
261 KOG1368 Threonine aldolase [Am 99.9 6.4E-21 1.4E-25 157.5 20.6 307 19-360 33-356 (384)
262 PTZ00125 ornithine aminotransf 99.9 6.1E-20 1.3E-24 169.8 29.1 301 21-359 49-382 (400)
263 PRK04073 rocD ornithine--oxo-a 99.9 8.6E-20 1.9E-24 168.2 29.8 298 21-365 58-392 (396)
264 PRK15407 lipopolysaccharide bi 99.9 4.2E-20 9.1E-25 170.8 26.3 273 42-338 63-378 (438)
265 KOG1360 5-aminolevulinate synt 99.9 7.9E-20 1.7E-24 156.8 24.6 314 9-357 179-509 (570)
266 cd01494 AAT_I Aspartate aminot 99.9 4.8E-21 1E-25 155.5 16.6 164 44-215 2-170 (170)
267 PRK07505 hypothetical protein; 99.9 3.7E-19 8.1E-24 164.4 30.2 303 21-365 62-394 (402)
268 PRK01278 argD acetylornithine 99.9 1.9E-19 4.2E-24 165.7 27.5 275 42-358 73-374 (389)
269 PRK06434 cystathionine gamma-l 99.9 1.9E-19 4.2E-24 162.9 26.6 280 41-364 63-379 (384)
270 COG0626 MetC Cystathionine bet 99.9 3.3E-19 7.2E-24 158.7 27.6 286 41-363 62-388 (396)
271 PRK02627 acetylornithine amino 99.9 3.3E-19 7.2E-24 164.8 28.5 275 41-357 80-379 (396)
272 TIGR03531 selenium_SpcS O-phos 99.9 4.2E-19 9.2E-24 162.1 28.4 263 40-332 103-386 (444)
273 KOG1359 Glycine C-acetyltransf 99.9 3.1E-19 6.7E-24 147.4 22.7 311 8-361 74-401 (417)
274 COG2873 MET17 O-acetylhomoseri 99.9 5.1E-19 1.1E-23 151.1 24.7 263 41-327 61-362 (426)
275 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 4.4E-20 9.6E-25 165.6 18.8 269 41-335 65-398 (417)
276 TIGR02618 tyr_phenol_ly tyrosi 99.8 9.7E-19 2.1E-23 157.5 26.4 265 41-334 70-374 (450)
277 KOG0633 Histidinol phosphate a 99.8 3.8E-19 8.1E-24 144.5 20.4 286 47-366 74-373 (375)
278 TIGR01885 Orn_aminotrans ornit 99.8 4.2E-18 9.2E-23 157.3 30.3 299 21-360 55-390 (401)
279 TIGR03811 tyr_de_CO2_Ent tyros 99.8 7.2E-18 1.6E-22 159.2 28.3 280 7-293 83-476 (608)
280 KOG0053 Cystathionine beta-lya 99.8 1E-17 2.2E-22 147.3 25.7 213 42-292 77-294 (409)
281 PRK02936 argD acetylornithine 99.8 1.9E-17 4.2E-22 151.9 28.8 269 43-358 72-365 (377)
282 PRK13237 tyrosine phenol-lyase 99.8 1.3E-17 2.9E-22 150.6 27.0 265 42-334 78-381 (460)
283 PRK05093 argD bifunctional N-s 99.8 1.3E-17 2.7E-22 154.2 27.1 271 42-358 82-386 (403)
284 KOG2790 Phosphoserine aminotra 99.8 2.9E-18 6.3E-23 140.9 18.4 331 4-357 2-353 (370)
285 PF01212 Beta_elim_lyase: Beta 99.8 9.6E-20 2.1E-24 158.3 9.8 256 20-299 7-277 (290)
286 PRK15029 arginine decarboxylas 99.8 3.7E-17 8.1E-22 157.3 28.1 228 40-292 203-464 (755)
287 PRK04260 acetylornithine amino 99.8 2.6E-17 5.7E-22 150.7 25.6 297 21-360 46-365 (375)
288 TIGR03246 arg_catab_astC succi 99.8 4.8E-17 1E-21 149.8 27.3 274 42-360 77-383 (397)
289 PLN02624 ornithine-delta-amino 99.8 4.3E-17 9.2E-22 152.6 27.0 298 21-360 93-432 (474)
290 PF06838 Met_gamma_lyase: Meth 99.8 3.8E-18 8.2E-23 146.3 18.1 277 22-327 27-331 (403)
291 COG4992 ArgD Ornithine/acetylo 99.8 4.9E-17 1.1E-21 142.5 24.1 314 5-361 38-387 (404)
292 TIGR00713 hemL glutamate-1-sem 99.8 3.3E-17 7.1E-22 152.5 24.7 309 20-364 65-416 (423)
293 PRK12381 bifunctional succinyl 99.8 9E-17 1.9E-21 148.4 26.6 277 42-359 81-386 (406)
294 PRK05964 adenosylmethionine--8 99.8 1.1E-16 2.3E-21 148.6 27.1 288 42-360 85-410 (423)
295 KOG1357 Serine palmitoyltransf 99.8 3.2E-17 7E-22 143.1 18.9 320 11-365 147-497 (519)
296 TIGR00461 gcvP glycine dehydro 99.8 4.9E-16 1.1E-20 151.8 28.8 313 18-360 76-419 (939)
297 PLN00144 acetylornithine trans 99.8 6.2E-16 1.3E-20 141.3 27.8 293 21-358 33-366 (382)
298 PRK13578 ornithine decarboxyla 99.8 7.1E-16 1.5E-20 147.1 26.8 242 41-297 173-445 (720)
299 PRK08117 4-aminobutyrate amino 99.7 1.9E-15 4.1E-20 140.7 27.9 309 21-360 61-417 (433)
300 TIGR00700 GABAtrnsam 4-aminobu 99.7 4.7E-15 1E-19 137.4 29.7 307 21-358 51-406 (420)
301 COG3977 Alanine-alpha-ketoisov 99.7 9.5E-16 2.1E-20 127.3 21.7 287 41-365 77-406 (417)
302 COG0160 GabT 4-aminobutyrate a 99.7 3.7E-15 7.9E-20 134.7 27.4 316 19-365 72-440 (447)
303 PRK15400 lysine decarboxylase 99.7 1.4E-15 2.9E-20 145.0 25.7 227 41-292 194-442 (714)
304 COG1003 GcvP Glycine cleavage 99.7 2.6E-15 5.6E-20 131.1 24.6 300 40-357 107-432 (496)
305 PRK09792 4-aminobutyrate trans 99.7 6.9E-15 1.5E-19 136.1 29.2 288 42-360 83-409 (421)
306 PRK08088 4-aminobutyrate amino 99.7 5.3E-15 1.2E-19 137.4 28.4 290 43-360 85-411 (425)
307 KOG1383 Glutamate decarboxylas 99.7 1E-15 2.2E-20 134.7 21.6 275 40-334 118-410 (491)
308 PRK08360 4-aminobutyrate amino 99.7 3.4E-14 7.4E-19 131.9 31.0 306 21-360 59-414 (443)
309 KOG0629 Glutamate decarboxylas 99.7 6.4E-16 1.4E-20 134.1 17.9 272 16-299 113-421 (510)
310 TIGR02407 ectoine_ectB diamino 99.7 2.1E-14 4.6E-19 132.5 29.2 309 21-360 53-400 (412)
311 KOG3846 L-kynurenine hydrolase 99.7 1.8E-15 4E-20 126.0 19.2 307 42-359 111-448 (465)
312 PRK07986 adenosylmethionine--8 99.7 2.9E-14 6.4E-19 131.5 29.0 309 21-360 61-411 (428)
313 PRK06777 4-aminobutyrate amino 99.7 3.7E-14 8.1E-19 131.2 29.8 286 42-359 83-408 (421)
314 PLN02760 4-aminobutyrate:pyruv 99.7 4E-14 8.6E-19 133.0 30.3 293 41-360 132-479 (504)
315 PRK15399 lysine decarboxylase 99.7 1.8E-14 3.9E-19 137.5 28.0 225 41-292 194-442 (713)
316 PRK06173 adenosylmethionine--8 99.7 3.7E-14 7.9E-19 131.1 29.4 310 21-360 62-413 (429)
317 PRK03715 argD acetylornithine 99.7 1.6E-14 3.5E-19 132.4 26.9 298 21-360 54-381 (395)
318 TIGR03372 putres_am_tran putre 99.7 2.1E-14 4.5E-19 132.7 27.4 309 21-365 93-439 (442)
319 PF12897 Aminotran_MocR: Alani 99.7 8E-15 1.7E-19 126.9 22.5 294 36-362 62-407 (425)
320 COG4100 Cystathionine beta-lya 99.7 4.6E-15 1E-19 123.2 19.9 282 22-327 38-342 (416)
321 PRK07495 4-aminobutyrate amino 99.7 6.7E-14 1.5E-18 129.4 29.9 310 21-360 58-409 (425)
322 KOG2467 Glycine/serine hydroxy 99.7 9.4E-15 2E-19 124.6 21.6 323 9-352 41-402 (477)
323 PRK06541 hypothetical protein; 99.7 7.5E-14 1.6E-18 130.2 29.3 291 42-360 95-443 (460)
324 PRK04612 argD acetylornithine 99.7 4.7E-14 1E-18 129.7 27.6 303 21-360 58-391 (408)
325 COG0001 HemL Glutamate-1-semia 99.7 3.1E-14 6.8E-19 126.4 25.3 308 21-364 71-422 (432)
326 PRK06058 4-aminobutyrate amino 99.7 1.8E-13 3.9E-18 127.6 31.8 307 21-360 74-430 (443)
327 PRK08593 4-aminobutyrate amino 99.7 1.2E-13 2.6E-18 128.5 30.4 307 21-360 60-417 (445)
328 PRK00062 glutamate-1-semialdeh 99.7 1.9E-14 4.1E-19 133.6 24.6 308 21-365 68-419 (426)
329 PRK11522 putrescine--2-oxoglut 99.7 5.6E-14 1.2E-18 130.7 26.8 310 21-360 100-439 (459)
330 PRK09264 diaminobutyrate--2-ox 99.7 1.4E-13 3E-18 127.7 29.3 308 21-359 57-403 (425)
331 TIGR00508 bioA adenosylmethion 99.7 1.3E-13 2.8E-18 127.7 28.6 293 42-365 88-421 (427)
332 PRK06918 4-aminobutyrate amino 99.7 1.7E-13 3.7E-18 128.1 29.4 307 21-359 72-430 (451)
333 PRK13360 omega amino acid--pyr 99.7 1.9E-13 4.1E-18 127.0 29.2 314 20-360 63-428 (442)
334 COG1982 LdcC Arginine/lysine/o 99.7 4.4E-14 9.6E-19 129.5 24.1 269 42-334 70-372 (557)
335 PRK06943 adenosylmethionine--8 99.7 3.8E-13 8.2E-18 125.2 30.1 310 21-360 72-434 (453)
336 PRK05769 4-aminobutyrate amino 99.7 3.3E-13 7.2E-18 125.4 29.4 283 42-360 97-427 (441)
337 PRK09221 beta alanine--pyruvat 99.7 3E-13 6.4E-18 125.8 28.9 292 42-360 92-431 (445)
338 PRK07678 aminotransferase; Val 99.7 5.7E-13 1.2E-17 124.2 30.6 315 21-360 65-437 (451)
339 PRK06105 aminotransferase; Pro 99.6 3.2E-13 6.9E-18 126.1 28.8 313 21-360 66-437 (460)
340 PRK12389 glutamate-1-semialdeh 99.6 2.5E-13 5.5E-18 126.0 27.9 241 21-292 71-341 (428)
341 PRK05630 adenosylmethionine--8 99.6 4.4E-13 9.6E-18 123.8 28.4 307 21-360 58-408 (422)
342 PRK07482 hypothetical protein; 99.6 9.2E-13 2E-17 123.0 30.1 315 21-360 68-442 (461)
343 COG1921 SelA Selenocysteine sy 99.6 5.4E-14 1.2E-18 123.5 19.9 247 14-291 33-294 (395)
344 PRK05639 4-aminobutyrate amino 99.6 1.8E-12 3.8E-17 120.8 31.2 308 21-360 71-431 (457)
345 PRK05965 hypothetical protein; 99.6 1.2E-12 2.5E-17 122.3 30.0 314 21-360 64-435 (459)
346 PRK06062 hypothetical protein; 99.6 1.1E-12 2.3E-17 122.2 29.6 307 21-360 71-433 (451)
347 PRK00615 glutamate-1-semialdeh 99.6 2.4E-13 5.3E-18 125.5 24.6 312 21-365 71-423 (433)
348 PF02347 GDC-P: Glycine cleava 99.6 1.9E-13 4E-18 123.1 22.8 238 40-296 108-369 (429)
349 PRK12403 putative aminotransfe 99.6 1.9E-12 4.1E-17 120.9 30.5 289 41-360 97-440 (460)
350 KOG1402 Ornithine aminotransfe 99.6 2.4E-13 5.3E-18 114.5 21.5 301 19-362 75-417 (427)
351 TIGR00709 dat 2,4-diaminobutyr 99.6 2.7E-12 5.8E-17 119.6 30.6 308 21-360 57-423 (442)
352 PRK07030 adenosylmethionine--8 99.6 1.8E-12 4E-17 121.0 29.1 311 21-360 65-434 (466)
353 PRK06916 adenosylmethionine--8 99.6 2.7E-12 5.9E-17 119.8 30.2 311 21-360 74-443 (460)
354 PRK08742 adenosylmethionine--8 99.6 1.7E-12 3.7E-17 121.1 28.6 311 21-360 82-455 (472)
355 PRK07046 aminotransferase; Val 99.6 1.2E-12 2.6E-17 121.8 27.4 242 22-291 94-363 (453)
356 PLN02482 glutamate-1-semialdeh 99.6 6.3E-13 1.4E-17 123.8 25.5 242 21-292 117-387 (474)
357 COG1448 TyrB Aspartate/tyrosin 99.6 1.2E-12 2.7E-17 113.2 25.2 318 11-366 36-394 (396)
358 COG0161 BioA Adenosylmethionin 99.6 7.4E-13 1.6E-17 119.2 24.7 285 44-357 89-428 (449)
359 PF03841 SelA: L-seryl-tRNA se 99.6 9.4E-16 2E-20 133.4 5.8 247 15-292 13-296 (367)
360 PRK07036 hypothetical protein; 99.6 3.2E-12 7E-17 119.5 29.5 290 42-359 95-439 (466)
361 PRK06917 hypothetical protein; 99.6 1E-11 2.2E-16 115.7 32.1 314 21-360 49-425 (447)
362 COG0403 GcvP Glycine cleavage 99.6 3.3E-12 7.2E-17 111.9 26.5 293 41-358 119-436 (450)
363 PRK07483 hypothetical protein; 99.6 7.3E-12 1.6E-16 116.4 30.8 294 42-360 73-425 (443)
364 PRK06149 hypothetical protein; 99.6 2.1E-12 4.5E-17 130.9 29.0 308 21-359 601-957 (972)
365 PRK07481 hypothetical protein; 99.6 8.8E-12 1.9E-16 116.2 30.2 292 42-360 86-433 (449)
366 PRK06082 4-aminobutyrate amino 99.6 1.6E-11 3.5E-16 114.6 31.8 305 20-360 88-439 (459)
367 PRK04013 argD acetylornithine/ 99.6 3.1E-12 6.7E-17 115.5 25.0 283 21-360 42-348 (364)
368 PRK07480 putative aminotransfe 99.6 5.6E-12 1.2E-16 117.5 27.5 310 21-360 68-436 (456)
369 TIGR03251 LAT_fam L-lysine 6-t 99.6 4.4E-12 9.5E-17 117.8 26.4 291 42-366 85-430 (431)
370 TIGR02617 tnaA_trp_ase tryptop 99.5 2E-12 4.4E-17 115.9 22.3 283 20-333 55-388 (467)
371 PRK06938 diaminobutyrate--2-ox 99.5 2.9E-11 6.2E-16 113.0 29.8 307 21-359 81-447 (464)
372 KOG0258 Alanine aminotransfera 99.5 4.3E-12 9.3E-17 109.5 22.1 318 20-354 87-456 (475)
373 PRK08297 L-lysine aminotransfe 99.5 3.2E-11 7E-16 112.1 28.3 287 42-360 92-429 (443)
374 PRK06148 hypothetical protein; 99.5 2.8E-11 6E-16 123.0 29.5 288 42-360 663-998 (1013)
375 TIGR00699 GABAtrns_euk 4-amino 99.5 1.8E-11 4E-16 113.4 25.3 270 61-365 123-461 (464)
376 PRK12566 glycine dehydrogenase 99.5 8.8E-11 1.9E-15 114.8 28.6 316 11-360 82-432 (954)
377 PRK06931 diaminobutyrate--2-ox 99.5 2.7E-10 5.9E-15 106.4 30.7 309 21-360 76-442 (459)
378 KOG1404 Alanine-glyoxylate ami 99.5 2.9E-11 6.3E-16 104.6 21.7 309 20-359 67-425 (442)
379 PF00202 Aminotran_3: Aminotra 99.5 1E-11 2.2E-16 111.7 19.6 227 40-292 57-316 (339)
380 PRK06209 glutamate-1-semialdeh 99.4 2.2E-11 4.8E-16 113.1 21.6 222 44-291 90-328 (431)
381 PLN02974 adenosylmethionine-8- 99.4 3.3E-10 7.1E-15 111.4 29.1 212 124-358 567-804 (817)
382 KOG0628 Aromatic-L-amino-acid/ 99.4 1.3E-10 2.7E-15 102.8 22.3 295 41-354 112-452 (511)
383 KOG1401 Acetylornithine aminot 99.4 1.7E-10 3.8E-15 100.6 21.7 248 20-291 73-347 (433)
384 PF05889 SLA_LP_auto_ag: Solub 99.3 4.7E-11 1E-15 105.2 14.1 287 42-366 56-386 (389)
385 KOG1358 Serine palmitoyltransf 99.3 5.2E-10 1.1E-14 96.9 19.3 320 6-362 99-455 (467)
386 KOG2040 Glycine dehydrogenase 99.2 1.2E-09 2.6E-14 100.2 18.8 301 39-355 579-901 (1001)
387 COG3033 TnaA Tryptophanase [Am 99.1 1.6E-08 3.4E-13 87.0 20.5 290 16-335 56-393 (471)
388 PF04864 Alliinase_C: Allinase 99.0 7E-09 1.5E-13 89.3 13.5 280 44-367 45-362 (363)
389 KOG2040 Glycine dehydrogenase 98.6 7.2E-06 1.6E-10 76.1 19.4 307 19-360 131-471 (1001)
390 KOG1403 Predicted alanine-glyo 98.5 4E-05 8.7E-10 64.8 18.2 301 19-350 61-415 (452)
391 KOG1412 Aspartate aminotransfe 98.3 0.00025 5.5E-09 60.5 20.5 285 43-365 75-400 (410)
392 KOG1411 Aspartate aminotransfe 98.2 6.7E-05 1.4E-09 64.8 13.5 242 65-335 125-397 (427)
393 KOG1405 4-aminobutyrate aminot 97.9 0.0015 3.2E-08 56.9 16.5 207 123-366 255-479 (484)
394 PLN02994 1-aminocyclopropane-1 97.8 8.9E-05 1.9E-09 58.2 7.5 54 42-95 96-152 (153)
395 KOG3843 Predicted serine hydro 96.7 0.032 7E-07 46.8 10.8 173 42-224 57-249 (432)
396 KOG0630 Predicted pyridoxal-de 90.7 4 8.7E-05 38.0 10.8 191 87-299 233-441 (838)
397 PF02310 B12-binding: B12 bind 87.3 4.9 0.00011 29.9 8.0 72 99-179 20-91 (121)
398 TIGR03573 WbuX N-acetyl sugar 85.7 13 0.00029 33.6 11.2 126 39-179 37-170 (343)
399 COG1066 Sms Predicted ATP-depe 83.7 13 0.00029 34.1 9.8 95 72-174 109-215 (456)
400 COG0552 FtsY Signal recognitio 81.4 40 0.00086 30.2 13.2 136 40-179 106-270 (340)
401 COG1105 FruK Fructose-1-phosph 81.1 18 0.0004 32.0 9.6 113 63-178 31-168 (310)
402 cd02067 B12-binding B12 bindin 79.6 22 0.00049 26.3 8.9 70 99-177 19-89 (119)
403 PRK11889 flhF flagellar biosyn 76.0 68 0.0015 29.9 14.4 131 41-178 217-362 (436)
404 PF05368 NmrA: NmrA-like famil 75.4 32 0.0007 28.9 9.6 62 101-174 38-99 (233)
405 PRK02261 methylaspartate mutas 73.0 40 0.00088 25.9 9.5 58 99-165 23-80 (137)
406 cd02070 corrinoid_protein_B12- 72.6 41 0.0009 27.7 9.2 69 99-176 102-172 (201)
407 TIGR02026 BchE magnesium-proto 72.2 32 0.0007 33.0 9.6 73 100-179 29-102 (497)
408 TIGR01470 cysG_Nterm siroheme 72.1 31 0.00067 28.6 8.3 92 62-177 11-103 (205)
409 KOG2142 Molybdenum cofactor su 71.9 11 0.00023 36.5 6.0 311 11-340 23-374 (728)
410 cd02069 methionine_synthase_B1 69.6 51 0.0011 27.5 9.1 68 99-175 108-175 (213)
411 cd02072 Glm_B12_BD B12 binding 68.7 48 0.001 25.1 7.9 68 99-175 19-87 (128)
412 COG1954 GlpP Glycerol-3-phosph 68.0 12 0.00026 29.7 4.6 51 122-181 12-62 (181)
413 COG0329 DapA Dihydrodipicolina 65.6 98 0.0021 27.4 11.1 74 99-179 91-169 (299)
414 TIGR02370 pyl_corrinoid methyl 64.5 79 0.0017 26.0 9.2 69 99-176 104-174 (197)
415 COG2870 RfaE ADP-heptose synth 64.4 22 0.00048 32.5 6.1 63 109-176 115-178 (467)
416 TIGR01501 MthylAspMutase methy 63.6 65 0.0014 24.7 8.3 58 99-165 21-78 (134)
417 TIGR00160 MGSA methylglyoxal s 63.0 47 0.001 25.6 6.9 69 104-179 45-114 (143)
418 TIGR00322 diphth2_R diphthamid 63.0 23 0.00049 32.0 6.1 79 120-204 4-84 (332)
419 KOG4589 Cell division protein 62.4 84 0.0018 25.7 8.4 44 122-165 121-165 (232)
420 PRK05562 precorrin-2 dehydroge 61.1 1E+02 0.0022 26.0 9.4 91 62-176 27-118 (223)
421 TIGR01305 GMP_reduct_1 guanosi 60.6 1.3E+02 0.0028 27.1 10.8 148 21-177 58-220 (343)
422 PF00289 CPSase_L_chain: Carba 60.0 61 0.0013 23.8 6.9 69 86-165 4-72 (110)
423 cd01121 Sms Sms (bacterial rad 59.8 1.1E+02 0.0023 28.3 9.9 88 80-174 106-205 (372)
424 COG0031 CysK Cysteine synthase 59.5 46 0.00099 29.4 7.2 92 57-153 59-155 (300)
425 PF03652 UPF0081: Uncharacteri 58.8 61 0.0013 24.8 7.1 57 120-179 37-98 (135)
426 cd00950 DHDPS Dihydrodipicolin 58.4 1.2E+02 0.0026 26.5 10.0 76 99-177 87-163 (284)
427 TIGR00640 acid_CoA_mut_C methy 57.2 85 0.0018 23.9 8.3 58 99-165 22-79 (132)
428 TIGR00649 MG423 conserved hypo 56.5 1.4E+02 0.003 28.0 10.5 96 61-165 287-398 (422)
429 TIGR00272 DPH2 diphthamide bio 55.9 43 0.00092 32.1 6.9 78 121-204 37-119 (496)
430 PF01972 SDH_sah: Serine dehyd 54.1 33 0.00072 29.7 5.3 77 122-206 76-153 (285)
431 COG0616 SppA Periplasmic serin 54.1 59 0.0013 29.1 7.2 96 122-224 81-179 (317)
432 cd00952 CHBPH_aldolase Trans-o 53.1 1.7E+02 0.0036 26.1 10.1 76 99-177 95-172 (309)
433 COG0296 GlgB 1,4-alpha-glucan 53.1 14 0.00031 36.1 3.3 39 140-180 200-238 (628)
434 cd00954 NAL N-Acetylneuraminic 51.2 1.5E+02 0.0033 26.0 9.3 76 99-177 88-165 (288)
435 PRK09189 uroporphyrinogen-III 50.5 1.4E+02 0.0031 25.2 8.9 76 68-146 102-179 (240)
436 PRK12724 flagellar biosynthesi 50.2 2.2E+02 0.0048 26.7 13.6 129 41-179 194-345 (432)
437 TIGR02313 HpaI-NOT-DapA 2,4-di 49.6 1.8E+02 0.004 25.6 9.9 77 99-177 87-165 (294)
438 COG1184 GCD2 Translation initi 49.4 1.9E+02 0.0041 25.7 11.1 123 41-179 99-232 (301)
439 PF01596 Methyltransf_3: O-met 49.4 1.5E+02 0.0033 24.6 9.5 146 22-181 8-160 (205)
440 COG1587 HemD Uroporphyrinogen- 49.4 1.7E+02 0.0036 25.0 9.9 77 67-146 106-184 (248)
441 COG0159 TrpA Tryptophan syntha 48.9 1.8E+02 0.0039 25.3 9.5 64 85-155 124-188 (265)
442 PF05687 DUF822: Plant protein 48.1 1.2E+02 0.0025 23.5 6.7 48 273-336 17-64 (150)
443 PF00448 SRP54: SRP54-type pro 47.4 1.1E+02 0.0024 25.2 7.3 93 84-179 29-126 (196)
444 PLN02417 dihydrodipicolinate s 47.2 2E+02 0.0043 25.2 10.3 75 99-177 88-162 (280)
445 PLN02683 pyruvate dehydrogenas 47.1 99 0.0022 28.2 7.6 26 154-181 268-293 (356)
446 PRK05096 guanosine 5'-monophos 47.1 2.2E+02 0.0048 25.7 10.1 89 83-177 121-221 (346)
447 PF04309 G3P_antiterm: Glycero 46.8 6.6 0.00014 31.5 0.0 81 124-225 10-90 (175)
448 PF13941 MutL: MutL protein 46.4 1.6E+02 0.0034 28.0 8.8 89 39-145 40-132 (457)
449 PRK14723 flhF flagellar biosyn 46.1 3.5E+02 0.0075 27.7 12.2 88 82-178 212-305 (767)
450 PRK11823 DNA repair protein Ra 45.9 2.2E+02 0.0048 26.9 10.0 86 82-174 106-203 (446)
451 KOG2648 Diphthamide biosynthes 45.5 39 0.00086 31.4 4.7 80 121-206 36-117 (453)
452 TIGR00416 sms DNA repair prote 44.4 1.8E+02 0.0038 27.7 9.1 87 80-173 118-216 (454)
453 CHL00144 odpB pyruvate dehydro 44.3 1.1E+02 0.0024 27.6 7.4 27 154-182 241-267 (327)
454 PRK04147 N-acetylneuraminate l 44.1 2.2E+02 0.0049 25.0 10.1 76 99-177 91-167 (293)
455 PRK08811 uroporphyrinogen-III 43.9 63 0.0014 28.1 5.7 64 82-147 16-79 (266)
456 PTZ00182 3-methyl-2-oxobutanat 43.6 1.3E+02 0.0028 27.5 7.8 26 154-181 273-298 (355)
457 PRK00685 metal-dependent hydro 43.6 1.9E+02 0.0041 24.0 10.3 60 103-165 153-212 (228)
458 smart00642 Aamy Alpha-amylase 43.6 25 0.00053 28.1 2.9 32 146-179 62-93 (166)
459 PRK05703 flhF flagellar biosyn 42.9 2.9E+02 0.0063 26.0 13.4 128 43-179 198-343 (424)
460 COG2102 Predicted ATPases of P 42.8 2E+02 0.0044 24.1 9.6 98 63-173 4-116 (223)
461 KOG1467 Translation initiation 42.8 1.5E+02 0.0033 28.0 7.9 35 139-175 430-467 (556)
462 PF00128 Alpha-amylase: Alpha 42.2 31 0.00067 30.2 3.7 63 102-178 12-74 (316)
463 smart00481 POLIIIAc DNA polyme 41.0 97 0.0021 19.9 5.7 47 118-173 12-58 (67)
464 PF13407 Peripla_BP_4: Peripla 40.2 1.8E+02 0.0038 24.6 8.0 65 99-174 20-85 (257)
465 PLN02476 O-methyltransferase 40.2 2.6E+02 0.0056 24.6 11.6 125 42-181 104-233 (278)
466 cd01991 Asn_Synthase_B_C The C 40.1 2.4E+02 0.0052 24.2 9.0 115 46-178 3-125 (269)
467 PRK11892 pyruvate dehydrogenas 39.5 1.4E+02 0.0031 28.4 7.6 27 153-181 379-405 (464)
468 TIGR01362 KDO8P_synth 3-deoxy- 39.3 1.5E+02 0.0032 25.6 6.9 76 101-180 107-186 (258)
469 PRK03170 dihydrodipicolinate s 39.2 2.7E+02 0.0058 24.5 10.1 76 99-177 88-164 (292)
470 PRK13396 3-deoxy-7-phosphohept 38.5 1.2E+02 0.0025 27.7 6.5 60 121-182 219-284 (352)
471 PRK07239 bifunctional uroporph 38.2 2E+02 0.0043 26.5 8.4 78 68-148 126-212 (381)
472 PRK13397 3-deoxy-7-phosphohept 38.2 1E+02 0.0022 26.5 5.9 60 120-182 132-197 (250)
473 TIGR01319 glmL_fam conserved h 37.9 1.3E+02 0.0028 28.5 6.8 84 44-145 40-128 (463)
474 PRK09722 allulose-6-phosphate 37.4 2.6E+02 0.0056 23.7 9.3 108 83-199 81-198 (229)
475 TIGR00655 PurU formyltetrahydr 37.4 2.9E+02 0.0062 24.3 9.1 84 64-157 89-176 (280)
476 PRK12723 flagellar biosynthesi 37.3 3.4E+02 0.0074 25.2 14.4 88 83-179 205-298 (388)
477 TIGR00683 nanA N-acetylneurami 37.1 2.9E+02 0.0063 24.3 10.7 76 99-177 88-165 (290)
478 TIGR00250 RNAse_H_YqgF RNAse H 37.1 95 0.0021 23.6 5.0 56 121-179 35-94 (130)
479 PRK08462 biotin carboxylase; V 36.7 2.6E+02 0.0056 26.4 9.0 43 121-173 63-105 (445)
480 PRK09212 pyruvate dehydrogenas 36.6 1.5E+02 0.0032 26.7 7.0 25 154-180 241-265 (327)
481 TIGR00674 dapA dihydrodipicoli 36.1 3E+02 0.0064 24.1 9.7 76 99-177 85-161 (285)
482 PRK11709 putative L-ascorbate 35.8 3.1E+02 0.0068 25.0 9.0 63 99-164 234-301 (355)
483 COG1648 CysG Siroheme synthase 35.7 2.6E+02 0.0056 23.3 13.5 116 62-201 14-131 (210)
484 PF11823 DUF3343: Protein of u 35.6 1.3E+02 0.0029 19.9 6.2 32 86-117 4-35 (73)
485 cd05126 Mth938 Mth938 domain. 35.1 1.4E+02 0.003 22.2 5.6 50 120-177 45-94 (117)
486 COG1504 Uncharacterized conser 35.0 1.5E+02 0.0032 21.8 5.2 49 119-175 47-95 (121)
487 TIGR01536 asn_synth_AEB aspara 34.8 4.1E+02 0.0088 25.3 10.1 62 99-177 301-364 (467)
488 TIGR00290 MJ0570_dom MJ0570-re 34.8 2.8E+02 0.0061 23.4 9.1 98 63-173 4-115 (223)
489 PF05378 Hydant_A_N: Hydantoin 34.8 2.4E+02 0.0052 22.7 10.2 120 39-165 34-174 (176)
490 PF04131 NanE: Putative N-acet 34.6 1.5E+02 0.0033 24.2 6.0 72 121-202 52-123 (192)
491 TIGR03590 PseG pseudaminic aci 34.4 3.1E+02 0.0068 23.9 10.9 61 82-146 29-89 (279)
492 PF03162 Y_phosphatase2: Tyros 34.4 76 0.0016 25.2 4.3 69 86-154 35-109 (164)
493 PRK05752 uroporphyrinogen-III 34.2 84 0.0018 27.0 4.9 63 83-147 2-65 (255)
494 PF00701 DHDPS: Dihydrodipicol 33.7 2.7E+02 0.0058 24.4 8.2 77 99-178 88-165 (289)
495 COG2121 Uncharacterized protei 33.5 2.1E+02 0.0047 23.7 6.6 81 86-174 70-151 (214)
496 PLN02556 cysteine synthase/L-3 33.5 3.7E+02 0.008 24.7 9.1 86 61-151 112-197 (368)
497 PLN03033 2-dehydro-3-deoxyphos 33.4 2.3E+02 0.005 24.8 7.2 67 111-180 131-200 (290)
498 PF10087 DUF2325: Uncharacteri 33.2 1.8E+02 0.0038 20.6 8.1 62 99-174 15-80 (97)
499 COG0505 CarA Carbamoylphosphat 33.1 3.6E+02 0.0078 24.6 8.5 71 83-165 178-249 (368)
500 COG0108 RibB 3,4-dihydroxy-2-b 33.1 59 0.0013 26.7 3.4 33 140-174 158-190 (203)
No 1
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-52 Score=363.58 Aligned_cols=347 Identities=40% Similarity=0.654 Sum_probs=324.9
Q ss_pred cccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.+++.|||.+++++|+++|.+...+|++++|.....++.+.++..++.+..+.+++++|||.+++.++.+++.|||+|++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv 85 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLV 85 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEE
Confidence 78999999999999999999999999999999999999999999999996566899999999999999999999999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCC
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~ 169 (367)
...+.|+.+|.+++++.|.+++.+..+....+|+++++++++++ +..++|.++|..++||...|+++|.++|++ ||
T Consensus 86 ~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~--~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~--~g 161 (383)
T COG0075 86 VVNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD--PDIKAVAVVHNETSTGVLNPLKEIAKAAKE--HG 161 (383)
T ss_pred EeCChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC--CCccEEEEEeccCcccccCcHHHHHHHHHH--cC
Confidence 99999999999999999999999999988889999999999965 478999999999999999999999999999 99
Q ss_pred cEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 170 ALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
+++|+|+..++|..+++++++++|+++++++|++++|+|+|++..+++..+.+.....+++|+|+..+.+.++....+++
T Consensus 162 ~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~ 241 (383)
T COG0075 162 ALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPY 241 (383)
T ss_pred CEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999987777899999999888876345799
Q ss_pred CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
|+++..+.++..+++.+.++|++.+.++++++++.+++.++++|++++. +++..++.++.+..|.+++..++...++++
T Consensus 242 Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~P~g~~~~~~~~~~~~~ 320 (383)
T COG0075 242 TPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKVPEGVDDKKVRRALLKE 320 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEECCCCCCcHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998 666788899999999998877777788889
Q ss_pred CCeEEccCCCCCCCcEEEEeecCCCCHHHHHH
Q 017726 330 YNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 330 ~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~ 361 (367)
+|+.+.+|..++.+.+||||.+|.....|+..
T Consensus 321 ~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~ 352 (383)
T COG0075 321 YGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLA 352 (383)
T ss_pred CCEEecccccccCccEEEEecCccCCHHHHHH
Confidence 99999999999999999999999777766543
No 2
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=1.2e-50 Score=372.61 Aligned_cols=358 Identities=80% Similarity=1.295 Sum_probs=318.6
Q ss_pred CCCCCCCCCcccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
|+|++.|++.+++.|||..++++|++++.+....|+++.+.+.++++++.+++++|.+.++.+++++|||+++..++.++
T Consensus 1 ~~~~~~~~~~~l~~pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 1 MDYVYAPGRNHLFVPGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred CCcccCCCCceeccCCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 68999999999999999999999999999987778888899999999999999999986566899999999999999989
Q ss_pred CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHH
Q 017726 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (367)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~ 160 (367)
+++||+|++++++|++..|...++..|++++.++.+.+..+|++++++++++++.+++++|++++++|+||.++|+++|.
T Consensus 81 ~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~ 160 (401)
T PLN02409 81 LSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVR 160 (401)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHH
Confidence 99999999999999998887888989999999998876678999999999853212689999999999999999999999
Q ss_pred HH--HHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 161 KL--LDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 161 ~~--~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
++ |++ +|+++++|++++++..++++.++++|++++|+|||+++|+|+|+++++++.++++.+......+++|....
T Consensus 161 ~l~~~~~--~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (401)
T PLN02409 161 KLLDCAQ--HPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYL 238 (401)
T ss_pred HHHhhhc--cCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHH
Confidence 99 998 99999999999999999999888999999999999999999999999999999887665555667776655
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
...+.++++++|+++..++++.++++++.+.|++++.++..++++++++.|+++|+++..+++..+++.++++.+|++.+
T Consensus 239 ~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~ 318 (401)
T PLN02409 239 KFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGID 318 (401)
T ss_pred HHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCC
Confidence 54455555577899999999999999999999999999999999999999998999888765455677788898888888
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..++.+.|.+++||.+..|.+...+..||||.+++++..|+.
T Consensus 319 ~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~ 360 (401)
T PLN02409 319 SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLL 360 (401)
T ss_pred HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHH
Confidence 889999998889999999998877899999999998877764
No 3
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=100.00 E-value=2.4e-47 Score=314.48 Aligned_cols=354 Identities=41% Similarity=0.636 Sum_probs=324.6
Q ss_pred CCCCCCCCCcccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 1 ~~~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
|+||+-|.+. +++|||..++.+|.+++......|.+|++.++..++++-+...|...++.-.++.++|+.+++.++.++
T Consensus 10 ~~~m~~p~~~-L~gPGPsnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 10 LDPMYVPVRT-LLGPGPSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL 88 (385)
T ss_pred hccccCCcce-eecCCCcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh
Confidence 5899999998 999999999999999999999999999999999999999999999987777899999999999999999
Q ss_pred CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-HHHH
Q 017726 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-LSKV 159 (367)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~-~~~i 159 (367)
+.|||+|++...+.|+.++...+++.|+++..++.+.+....+|.+++++.. +++++|++++..+.||...| ++.+
T Consensus 89 lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsq---h~p~~vfv~hgdsSTgV~q~~~~~~ 165 (385)
T KOG2862|consen 89 LEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQ---HKPKAVFVTHGDSSTGVLQDLLAIS 165 (385)
T ss_pred cCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHh---cCCceEEEEecCccccccchHHHHH
Confidence 9999999999999999999999999999999999888888999999999997 57899999999999999999 6778
Q ss_pred HHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCC--CceeechHHH
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS--VRVFFDWKDY 237 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 237 (367)
.++|++ |++++++|...+.|+.++.++++++|+....++|.+++|+|+++++.++...++++..+. -.+|+|+...
T Consensus 166 g~lc~k--~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~ 243 (385)
T KOG2862|consen 166 GELCHK--HEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRL 243 (385)
T ss_pred HHHhhc--CCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence 999998 999999999999999999999999999999999999999999999999999999988776 4577886665
Q ss_pred HHHhhcC---CccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcC
Q 017726 238 IKFYNLG---TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 238 ~~~~~~~---~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
...+..+ +.++.|+++..+.++.+||+.+.++|+++..+++++.+++++..|+++|++....+++.+.+.+..+.+|
T Consensus 244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp 323 (385)
T KOG2862|consen 244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVP 323 (385)
T ss_pred cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecC
Confidence 4443322 4568899999999999999999999999999999999999999999999998887777788889999999
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+.|..+++.++.+++++.+..|..+..+.++|||..+.+...+..
T Consensus 324 ~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i 369 (385)
T KOG2862|consen 324 YGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYI 369 (385)
T ss_pred CCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHH
Confidence 9999999999999999999999999999999999998876554433
No 4
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-45 Score=334.36 Aligned_cols=344 Identities=20% Similarity=0.247 Sum_probs=294.8
Q ss_pred CCcccccCCCCCChHHHHHHHccCC-----CCCCCC-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNN-----EDYRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~-----~~~~~~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~ 77 (367)
.-+|++.++.+..|..|++++.++. +.+++. ...+.++++|+.+++++|+++.++|+||.|+|++++.+.
T Consensus 22 ~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va 101 (405)
T COG0520 22 PLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVA 101 (405)
T ss_pred CeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHH
Confidence 3479999999999999999999853 224322 235678999999999999996556999999999999999
Q ss_pred Hcc---CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 78 TNT---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 78 ~~~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
.++ +.+||+|++++.+|+++. |...++..|++++.+|.++++.++.|+++..++ ++||+|.+++.+|.||.
T Consensus 102 ~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~----~~Tklvais~vSn~tG~ 177 (405)
T COG0520 102 RGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT----PKTKLVALSHVSNVTGT 177 (405)
T ss_pred HHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC----CCceEEEEECccccccc
Confidence 887 689999999999999985 888888899999999999889999999999888 57899999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+.|+++|.++||+ +|+++++|++|+.++.++|+..+++|++++|+|||+.||.|+|++++++++++++.+....+...
T Consensus 178 ~~pv~~I~~la~~--~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~ 255 (405)
T COG0520 178 VNPVKEIAELAHE--HGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMI 255 (405)
T ss_pred cchHHHHHHHHHH--cCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCce
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999997765543332
Q ss_pred c---------hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 017726 233 D---------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (367)
Q Consensus 233 ~---------~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (367)
+ +.....+++.|+ +++.+.+++.+|++++++.|++++.++.+++.+++.+.|++. +++++.+..
T Consensus 256 ~~~~~~~~~~~~~~p~rfe~gT-----pn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~- 329 (405)
T COG0520 256 EYVSRDEGVTLAELPLRFEAGT-----PNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPD- 329 (405)
T ss_pred eeecccccccccCcchhhccCC-----chHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-
Confidence 2 234456777775 999999999999999999999999999999999999999998 899999755
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC--------CcEEEEeecCCCCHHHHH--Hhhhh
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA--------GKVFRIGHLGHLNEVMFN--FQLLF 365 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~--~~~l~ 365 (367)
.....++.|.+ +++++.++...|.++ ||.++.|.++-. ...+|+|++.+++.+|++ .++|+
T Consensus 330 ~~r~~~vsF~v-~~~~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~ 400 (405)
T COG0520 330 ADRGGIVSFNV-KGIHPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALK 400 (405)
T ss_pred ccCceEEEEEe-CCCCHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHH
Confidence 33456889998 688999999999766 899999865421 234999998888766554 44443
No 5
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.5e-42 Score=315.88 Aligned_cols=349 Identities=46% Similarity=0.734 Sum_probs=282.3
Q ss_pred ccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.+|+|||.++|+++++++.+....++++...+..+++++.+++++|.++++.+++++|+++++..++.+++.+||.|++.
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~ 80 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVG 80 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEe
Confidence 47999999999999999998765566666777899999999999999665567899999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCc
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~ 170 (367)
.++|++..+...++..|.+++.++.+.++.+|++++++.+++ +++++|++++++||+|.+.|+++|.++|++ +|+
T Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~---~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~--~~~ 155 (356)
T cd06451 81 VNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQ---HDIKAVTLTHNETSTGVLNPLEGIGALAKK--HDA 155 (356)
T ss_pred cCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhc---cCCCEEEEeccCCCcccccCHHHHHHHHHh--cCC
Confidence 888887545567788999999999887778999999999974 267999999999999999999999999999 999
Q ss_pred EEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhcc-CCCCceeechHHHHHHhhcCCccCC
Q 017726 171 LFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT-AKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 171 ~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
++++|++|+++..+++....++|+++.|+||++++|.|+|++++++++++++.. .....++.+..........+.+..+
T Consensus 156 ~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (356)
T cd06451 156 LLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPH 235 (356)
T ss_pred EEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCC
Confidence 999999999888777777778999999999999988999999999999887763 1111223332222221111212345
Q ss_pred CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
++++..+.++.++++++.+.|++++.++..++++++.+.|+++|+++..+. ..+.+.++++..+++.+..++++.|.++
T Consensus 236 t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (356)
T cd06451 236 TPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKP-ELRSPTVTAVLVPEGVDGDEVVRRLMKR 314 (356)
T ss_pred CChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCc-ccCCCceEEEECCCCCCHHHHHHHHHHh
Confidence 688888899999999998888999999999999999999999888776542 2235555667776667888999999876
Q ss_pred CCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 330 YNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 330 ~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
+||.+.+|..+..+.++|++++..++++ +.+..+|+
T Consensus 315 ~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~ 352 (356)
T cd06451 315 YNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALE 352 (356)
T ss_pred CCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 7999998876555678999998776544 44444444
No 6
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=5.5e-42 Score=312.64 Aligned_cols=342 Identities=22% Similarity=0.300 Sum_probs=280.8
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHHccCCCCCeE
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSPGDRI 87 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~ggt~al~~~~~~~~~~gd~v 87 (367)
+.+++.|||..++++|.+++.+.+ .++...+....+++|+.+++++|+++. +.+++|+|||+++..++.+++.+||++
T Consensus 3 ~~~l~~pgp~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~v 81 (363)
T TIGR02326 3 NYLLLTPGPLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKL 81 (363)
T ss_pred ceeEecCCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeE
Confidence 467899999999999999999877 566778889999999999999999764 469999999999999999988899998
Q ss_pred EEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcC
Q 017726 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR 167 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~ 167 (367)
++..+++|+..+...++..|.+++.++.+.++.+|+++++++++++ ++++++++++++||||.+.|+++|.++|++
T Consensus 82 lv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~-- 157 (363)
T TIGR02326 82 LVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD--PAITHIALVHCETTTGILNPIEAVAKLAHR-- 157 (363)
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC--CCccEEEEEeecCCccccCcHHHHHHHHHH--
Confidence 8888878876656778889999999999888889999999999864 256789999999999999999999999999
Q ss_pred CCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc-CCc
Q 017726 168 HPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL-GTF 246 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 246 (367)
+|+++++|++++++..++++..+++|++++|+|||++||+|+|+++++++.++++... ..+.+.+.......+.. ...
T Consensus 158 ~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (363)
T TIGR02326 158 HGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGN-ARSLSLDLYDQWRCMEDNHGK 236 (363)
T ss_pred cCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcC-CCceeecHHHHHHHHhccCCC
Confidence 9999999999999999999888899999999999999999999999999988776542 22334443222222221 112
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC--CCHHHHH
Q 017726 247 WPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSSEIV 323 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~ 323 (367)
..++++...+.++.++++.+.+. |++++.++++++++++++.|+++|+.+..+. ..+++.+++|.+++. .+..++.
T Consensus 237 ~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 315 (363)
T TIGR02326 237 WRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDD-EIQSPIITSFYSPEDPDYRFADFY 315 (363)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCc-ccCCceEEEEECCCCCCCCHHHHH
Confidence 35678888999999999998776 4888999999999999999999988776542 224555677888653 5667899
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 324 ~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+.|.++ ||.+.+|... ....||||+++.++.+|+
T Consensus 316 ~~L~~~-gi~v~~g~~~-~~~~iRi~~~~~~~~edv 349 (363)
T TIGR02326 316 QRLKEQ-GFVIYPGKVS-QVDCFRIGNIGEVDAADI 349 (363)
T ss_pred HHHHHC-CEEEECCcCC-CCCEEEEecCCCCCHHHH
Confidence 999655 9999988654 346899998886655443
No 7
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=2.4e-42 Score=315.82 Aligned_cols=343 Identities=24% Similarity=0.341 Sum_probs=285.9
Q ss_pred cccccCCCCCChHHHHHHHccCCC----------CCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNE----------DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~----------~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
+|++.+|+.++|+.|++++.++.. .+++..+.+..+++|+.+++++|++++++|++++|+|+++..++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 589999999999999999998622 1223346788999999999999999856799999999999999998
Q ss_pred c---CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 80 T---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 80 ~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
+ +.+|++|++.+.+|++.. |..+++..|+++..++.+.++.+|+++++++++ +++++|++++.+|.+|.+.
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~----~~~~lv~~~~~~~~tG~~~ 156 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN----PDTRLVSISHVENSTGVRN 156 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH----TTESEEEEESBETTTTBBS
T ss_pred cccccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc----cccceEEeecccccccEEe
Confidence 8 799999999999999987 777777899999999998888999999999998 5789999999999999999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeech
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
|+++|.++||+ +|+++++|++|+++..++++.++++|++++|+|| |.||+|+|+++++++..+++.+......+.+.
T Consensus 157 pi~~I~~~~~~--~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~ 233 (371)
T PF00266_consen 157 PIEEIAKLAHE--YGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDF 233 (371)
T ss_dssp SHHHHHHHHHH--TTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTH
T ss_pred eeceehhhhhc--cCCceeEechhccccccccccccccceeeecccc-cCCCCchhhheehhhhhhcccccccccccccc
Confidence 99999999999 9999999999999999999999999999999999 88999999999999999999766654443332
Q ss_pred HHHHH-Hh--hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEE
Q 017726 235 KDYIK-FY--NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 235 ~~~~~-~~--~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (367)
..... .+ ....+..+|+++..++++..+++.+.+.|++++.++..++++++.+.|+++ ++.++.++...+++.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 313 (371)
T PF00266_consen 234 PSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVS 313 (371)
T ss_dssp HHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEE
T ss_pred ccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEE
Confidence 22211 01 111223447999999999999999998899999999999999999999998 677777655557777899
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~ 361 (367)
|.+ ++.+..++.+.|.++ ||.+..|.... .++.+|+|++.+++.+|+++
T Consensus 314 ~~~-~~~~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~ 370 (371)
T PF00266_consen 314 FNL-PGSDADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDR 370 (371)
T ss_dssp EEE-TTSSHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHH
T ss_pred Eee-cCCCHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhh
Confidence 998 678899999999877 99999875543 23789999999999998864
No 8
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=2e-41 Score=309.69 Aligned_cols=352 Identities=22% Similarity=0.286 Sum_probs=283.3
Q ss_pred CCCCCcccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHHccCCC
Q 017726 5 YAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTLSP 83 (367)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~ggt~al~~~~~~~~~~ 83 (367)
|-..+.++|.|||.++++.+.+++.+.+ .++.+.+.+..+++++.+++++|.++. +.+++++||++++..++.++..+
T Consensus 1 ~~~~~~~~~~pgP~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~ 79 (368)
T PRK13479 1 MTENDPLLLTPGPLTTSRTVREAMLRDW-GSWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPR 79 (368)
T ss_pred CCCCCceeecCCCCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCC
Confidence 3445667999999999999999998875 566666778999999999999999653 55889999999999999999999
Q ss_pred CCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
||.+++..+++|+..+...++..|++++.++.+.++.+|+++++++++++ +++++|++++++||||...|+++|.++|
T Consensus 80 ~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~~~~i~~l~ 157 (368)
T PRK13479 80 DGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD--PRITHVALVHCETTTGILNPLDEIAAVA 157 (368)
T ss_pred CCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC--CCCcEEEEEcccCccccccCHHHHHHHH
Confidence 99999998888887666778889999999999877789999999999754 3578999999999999999999999999
Q ss_pred HhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 164 DEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
++ +|+++++|++++++..++++..+++|++++|+|||+.|++|+|+++++++.++++.... ..++.++.........
T Consensus 158 ~~--~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 234 (368)
T PRK13479 158 KR--HGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNS-RSLSLDLYDQWAYMEK 234 (368)
T ss_pred HH--cCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCC-CCeeecHHHHHhhhcc
Confidence 99 99999999999998888888888899999999999999999999999999988877543 3344443332221111
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC--CCHH
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSS 320 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 320 (367)
....+++++...++++.++++.+.+.| +++..+++.++++++.+.|+++|+++..+. ...++.++.|.++.. .+..
T Consensus 235 ~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 313 (368)
T PRK13479 235 TGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDA-EIQSPIIVTFHAPADPAYDFK 313 (368)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCc-hhcCceEEEEECCCCCCcCHH
Confidence 222356889889999999999887664 888899999999999999999998776542 224445566776543 5678
Q ss_pred HHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 321 EIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 321 ~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
++.++|.++ ||.+++|... ....+|+|.+++++.+ +....+|+
T Consensus 314 ~l~~~L~~~-gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~ 358 (368)
T PRK13479 314 EFYERLKEQ-GFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIA 358 (368)
T ss_pred HHHHHHHHC-CEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 899999765 9999887533 2457999987855544 44444443
No 9
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=1.7e-40 Score=302.56 Aligned_cols=346 Identities=23% Similarity=0.339 Sum_probs=277.7
Q ss_pred ccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.+|.|||..+++.+.+++.+ ...++...+.+..+++|+.+++++|+++.+ .+++++||++++..++.+++.++|++++
T Consensus 1 ~~~~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~ 79 (355)
T TIGR03301 1 ILLTPGPLSTSATVRDAMLV-DWCHWDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLV 79 (355)
T ss_pred CcCcCCCCCCCHHHHHHhhh-hccCCCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEE
Confidence 36899999999999999998 344666567788999999999999998653 5788999999999999998888999888
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCC
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~ 169 (367)
..+++|+..+...++..|.+++.++.+.++.+|++++++.++++ ++++++++++++|++|.+.|+++|.++|++ +|
T Consensus 80 ~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~--~~ 155 (355)
T TIGR03301 80 LINGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD--PDITHVATVHHETTTGILNPLEAIAKVARS--HG 155 (355)
T ss_pred ECCCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhC--CCceEEEEEecCCcccchhHHHHHHHHHHH--cC
Confidence 88877776555677889999999998877889999999999864 366788999999999999999999999999 99
Q ss_pred cEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 170 ALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
+++++|++++++..++++...++|++++|++|+++|++|+|+++++++.++.+.. .......++.....++......++
T Consensus 156 ~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (355)
T TIGR03301 156 AVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAG-NARSLYLDLYDQWAYMEKTGKWRF 234 (355)
T ss_pred CEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhC-CCCCceeeHHHHHHHhhhcCCCCC
Confidence 9999999999988888877778999999999999889999999999999988764 222334444332222222222367
Q ss_pred CCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC--CCHHHHHHHH
Q 017726 250 TPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH--INSSEIVRRA 326 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L 326 (367)
+++...+.++.++++.+.++| +++..++++++++++.+.|+++|+++..+.. ...+.++++++|.. .+..++.++|
T Consensus 235 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (355)
T TIGR03301 235 TPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPER-WQSPIIVSFLYPDDPDFDFDDFYQEL 313 (355)
T ss_pred CCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCC-CCCCcEEEEECCCCCcchHHHHHHHH
Confidence 889988899999999998877 8889999999999999999998887655422 23444567887643 4557899999
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecCCCCH--HHHHHhhhh
Q 017726 327 WQRYNLSLGLGLNKVAGKVFRIGHLGHLNE--VMFNFQLLF 365 (367)
Q Consensus 327 ~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~--~~~~~~~l~ 365 (367)
.++ ||.+.++..... .++||++++.++. .+...+.|+
T Consensus 314 ~~~-gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~ 352 (355)
T TIGR03301 314 KER-GFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIK 352 (355)
T ss_pred HHC-CEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHH
Confidence 755 999998764433 6899998886554 444444444
No 10
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=4.3e-40 Score=304.08 Aligned_cols=337 Identities=17% Similarity=0.202 Sum_probs=273.0
Q ss_pred CCCcccccCCCCCChHHHHHHHccCCCC-----CCC-----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 7 PGKNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
+..+|++.++-+++|+.+++++.++... +++ ....+..+++|+.+++++|++++++|++++|+|+++..+
T Consensus 18 ~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~ 97 (401)
T PRK10874 18 DAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLV 97 (401)
T ss_pred CceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHH
Confidence 3478999999999999999999875431 221 224566889999999999995555699999999999999
Q ss_pred HHcc----CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc
Q 017726 77 LTNT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT 150 (367)
Q Consensus 77 ~~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t 150 (367)
+.++ +.+||+|++++++|++.. |...++..|++++.++.+.++.+|+++++++++ ++|++|++++++|||
T Consensus 98 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~t~lv~i~~~~n~t 173 (401)
T PRK10874 98 AQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT----PRTRILALGQMSNVT 173 (401)
T ss_pred HHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC----cCcEEEEEeCCcccc
Confidence 8876 479999999999998863 667778899999999998778899999999997 467999999999999
Q ss_pred cccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCce
Q 017726 151 GVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (367)
Q Consensus 151 G~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 230 (367)
|.+.|+++|.++|++ +|+++++|++|+.+..++++...++|++++|+||.+ ||.|+|+++++++.++++.+......
T Consensus 174 G~~~~~~~i~~l~~~--~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~~~~ 250 (401)
T PRK10874 174 GGCPDLARAITLAHQ--AGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLY-GPTGIGVLYGKSELLEAMSPWQGGGK 250 (401)
T ss_pred cCcCCHHHHHHHHHH--cCCEEEEECCcccccccCCchhcCCCEEEEeccccc-CCCccEEEEEchHHHhcCCCeecCCc
Confidence 999999999999999 999999999999888888887778999999999955 79999999999999888765432211
Q ss_pred ee---c-----hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCC
Q 017726 231 FF---D-----WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKE 301 (367)
Q Consensus 231 ~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 301 (367)
.. + ......+++.| |+++..++++.++++++.+.|.+++.++..++++++.+.|+++ |+.+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~e~G-----t~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~-- 323 (401)
T PRK10874 251 MLTEVSFDGFTPQSAPWRFEAG-----TPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRC-- 323 (401)
T ss_pred ceEeeccCccCCCCChhhccCC-----CcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC--
Confidence 10 1 11122345544 5999999999999999999998889999999999999999987 8877654
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHHHHH
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~ 361 (367)
....+++|.+ ++.+..++.+.|.+ +||.+++|..+. ..+++|||++.+++++|+..
T Consensus 324 --~~~~i~~~~~-~~~~~~~~~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ 387 (401)
T PRK10874 324 --QDSSLLAFDF-AGVHHSDLVTLLAE-YGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDA 387 (401)
T ss_pred --CCCcEEEEEE-CCcCHHHHHHHHHH-CCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHH
Confidence 2345777887 45677899988865 599999876432 24689999988777665544
No 11
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=4.9e-40 Score=303.37 Aligned_cols=335 Identities=17% Similarity=0.175 Sum_probs=271.1
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCC-----CCCC-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~ 77 (367)
..+|++.++-+++|+.+++++.+.... +++. ...+..+++|+.+++++|.+++++|++|+|+|+++..++
T Consensus 16 ~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 16 GTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVA 95 (398)
T ss_pred CeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHH
Confidence 468999999999999999999875321 2211 234567899999999999965556999999999999998
Q ss_pred Hcc----CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 78 TNT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 78 ~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
.++ +.+||+|++++++|++.. +...++..|++++.++.+.++.+|+++++++++ +++++|++++++||||
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~----~~t~lv~i~~~~n~tG 171 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT----PRTRILALGQMSNVTG 171 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc----cCceEEEEECcccccc
Confidence 876 578999999999998853 556778899999999998777889999999997 4679999999999999
Q ss_pred ccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
.+.|+++|.++|++ +|+++++|++|+.+..++++...++|++++|+||.+ ||.|+|+++++++.++++.+.......
T Consensus 172 ~~~~~~~i~~~~~~--~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~~~~~ 248 (398)
T TIGR03392 172 GCPDLARAITLAHQ--YGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLY-GPTGIGVLYGKTELLEAMPPWQGGGKM 248 (398)
T ss_pred ccCCHHHHHHHHHH--cCCEEEEEhhhhcCCCCCChhhcCCCEEEEeccccc-CCCceEEEEEcHHHHhhCCCeecCCce
Confidence 99999999999999 999999999999888888877778999999999965 789999999999998887654322111
Q ss_pred e--------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 017726 232 F--------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (367)
Q Consensus 232 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (367)
. .......+++.| |+++..++++.++++++.+.|++++.++..++++++.+.|+++ |+.+..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~e~G-----T~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~--- 320 (398)
T TIGR03392 249 LSHVSFDGFIPQAVPHRFEAG-----TPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRC--- 320 (398)
T ss_pred EeeccccccccCCChhhccCC-----CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC---
Confidence 0 111223455555 5999999999999999999899899999999999999999987 8877653
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHHHH
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~ 360 (367)
....++.|.+ ++.+..++.+.|.+ +||.++.|..+. .++++|+|++.+++.+|+.
T Consensus 321 -~~~~i~~~~~-~~~~~~~l~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~ 383 (398)
T TIGR03392 321 -PGSSLLAFDF-AGVHHSDLAALLAE-SGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD 383 (398)
T ss_pred -CCCcEEEEEe-CCcCHHHHHHHHHh-CCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHH
Confidence 2345777887 46678899999865 599999876431 2468999998877665444
No 12
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=8.4e-40 Score=302.32 Aligned_cols=340 Identities=18% Similarity=0.179 Sum_probs=273.4
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCC-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~ 78 (367)
.+|++.++.+++|+.+++++.++... +.+. ......+++|+.+++++|..++++|++|+|+|+++..++.
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~ 103 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHH
Confidence 48999999999999999998775421 1211 2456688999999999998544569999999999998887
Q ss_pred c----cCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 79 N----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 79 ~----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
+ .+.+||+|++++++|++.. |...++..|++++.++.+.++.+|+++++++++ +++++|++++++||||.
T Consensus 104 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~t~lv~l~~~~n~tG~ 179 (406)
T PRK09295 104 SWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD----ERTRLLAITHVSNVLGT 179 (406)
T ss_pred HhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC----CCcEEEEEecchhcccc
Confidence 5 4689999999999988763 666778889999999998888899999999997 46799999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee-
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF- 231 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~- 231 (367)
+.|+++|.++|++ +|+++++|++|+.+..++++...++|++++|+||. .||.|+|++++++++++++.+.......
T Consensus 180 ~~~~~~i~~~~~~--~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~~~~~g~~~~ 256 (406)
T PRK09295 180 ENPLAEMIALAHQ--HGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKL-YGPTGIGILYVKEALLQEMPPWEGGGSMI 256 (406)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEcccccCccccCchhcCCCEEEeehhhc-cCCCCcEEEEEchHhHhhCCCcccCCcee
Confidence 9999999999999 99999999999999988888888999999999995 4799999999999988877543322110
Q ss_pred --e------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 017726 232 --F------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (367)
Q Consensus 232 --~------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (367)
. .+.....+++.| |+++..++++.++++++.+.|++++.++.+++++++.+.|+++ |++++.+..
T Consensus 257 ~~~~~~~~~~~~~~~~r~e~G-----T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~- 330 (406)
T PRK09295 257 ATVSLTEGTTWAKAPWRFEAG-----TPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQN- 330 (406)
T ss_pred eeeecCCccccCCchhhcCCC-----CccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC-
Confidence 0 111222455544 5999999999999999999999999999999999999999987 788877531
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHH--HHHhhhh
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVM--FNFQLLF 365 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~--~~~~~l~ 365 (367)
+ ..++.|.++ +.+..++.+.|. ++||.++.|..+. .+..+|+|++.+++.+| .+.++|+
T Consensus 331 -~-~~iv~~~~~-~~~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~ 399 (406)
T PRK09295 331 -R-LGVIAFNLG-KHHAYDVGSFLD-NYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred -C-ceEEEEEEC-CcCHHHHHHHHH-hCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHH
Confidence 3 457888874 567788888884 6699998875421 23579999987776554 4444443
No 13
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=1.2e-39 Score=302.75 Aligned_cols=339 Identities=18% Similarity=0.185 Sum_probs=272.7
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCC-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~ 78 (367)
.+|++..++.++|+.+++++.++... +++. ...+..+++|+.+++++|++++++|++++|+|+++..++.
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~ 112 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAY 112 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHH
Confidence 58999999999999999999875321 1211 1345578999999999999755569999999999999887
Q ss_pred c----cCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 79 N----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 79 ~----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
+ .+.+||+|++++++|++.. |...++..|++++.++.+.++.+|++++++.++ +++++|++++++|+||.
T Consensus 113 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 113 TWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS----EKTKLVATHHVSNVLGS 188 (424)
T ss_pred HhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc----cCceEEEEeCccccccc
Confidence 5 3689999999999998764 666778889999999988777799999999997 47799999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee-
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF- 231 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~- 231 (367)
++|+++|.++|++ +|+++++|++|+.+..++++...++|++++|+||. .||.|+|++++++++++++.+.......
T Consensus 189 ~~~~~~I~~l~~~--~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~~~p~~~g~~~~ 265 (424)
T PLN02855 189 ILPVEDIVHWAHA--VGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKM-CGPTGIGFLWGKSDLLESMPPFLGGGEMI 265 (424)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccc-cCCCccEEEEEchhhhhcCCCEecCCCce
Confidence 9999999999999 99999999999998888888888899999999995 5799999999999998887654322111
Q ss_pred ----ec---hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCC--
Q 017726 232 ----FD---WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKE-- 301 (367)
Q Consensus 232 ----~~---~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-- 301 (367)
.+ +.....+++.| |+++..++++.++++++.+.|++++.++..++++++++.|+++ |++++.+.+
T Consensus 266 ~~~~~~~~~~~~~~~r~e~G-----T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~ 340 (424)
T PLN02855 266 SDVFLDHSTYAPPPSRFEAG-----TPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSE 340 (424)
T ss_pred eeeecCccccCCChhhccCC-----ChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccc
Confidence 01 11112344444 6999999999999999999999999999999999999999997 888887532
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--------CCCcEEEEeecCCCCHHHHH
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--------VAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--------~~~~~iRi~~~~~~~~~~~~ 360 (367)
......++.|.++ +.+..++.+.|.+++||.++.|... ..+..+|||++.+++.+|+.
T Consensus 341 ~~~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~ 406 (424)
T PLN02855 341 GVGRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVD 406 (424)
T ss_pred ccCcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHH
Confidence 1123457888884 5678899999976679999977532 11357999998777765544
No 14
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=1.6e-38 Score=291.67 Aligned_cols=337 Identities=19% Similarity=0.204 Sum_probs=265.3
Q ss_pred ccccCC-CCCChHHHHHHHccCCCC-----CC-CCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 11 HLFVPG-PVHIPDQVIRAMNRNNED-----YR-SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 11 ~~~~~~-p~~~~~~v~~a~~~~~~~-----~~-~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
|++.++ +.+.|+.+.+++.+.... +. .+. ......++++.+++++|.+++++|++++|+++++.+++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 556555 446778888888764322 11 111 2367889999999999997665699999999999999999
Q ss_pred cCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH
Q 017726 80 TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS 157 (367)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~ 157 (367)
++.+||+|++..++|.+.. +...++..|.+++.++.+.++.+|+++++++++ ++++++++++++||||.+.|++
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~----~~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK----TNTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC----CCCeEEEEECCCCCccccCCHH
Confidence 8899999999988887764 445677779999999988778899999999997 4679999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc-----eee
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR-----VFF 232 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~-----~~~ 232 (367)
+|.++|++ +|+++++|+++++|..++++...++|++++|+|||+.||.|+|+++++++. .+.+..... ...
T Consensus 158 ~i~~l~~~--~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~ 233 (376)
T TIGR01977 158 EIGELAQE--NGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALI 233 (376)
T ss_pred HHHHHHHH--cCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCccccccc
Confidence 99999999 999999999999999988888889999999999999999999999988875 222222111 011
Q ss_pred c-hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEE
Q 017726 233 D-WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~-~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (367)
+ ......+++.+ |++...++++.++++++.+.|++.++++..++++++.+.|++. |+++..+.+......+++
T Consensus 234 ~~~~~~~~r~~~~-----t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~ 308 (376)
T TIGR01977 234 DQPSELPDRFESG-----TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS 308 (376)
T ss_pred cccccchhhccCC-----CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence 1 01112344544 5888888999999999999999999999999999999999986 788876532223455788
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCC----------CCCcEEEEeecCCCCHHHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNK----------VAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~----------~~~~~iRi~~~~~~~~~~~~~ 361 (367)
|.+ .+.+..++.++|.+++||.+..|... ...+.||++++.+++++|+..
T Consensus 309 ~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~ 368 (376)
T TIGR01977 309 FTV-EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEK 368 (376)
T ss_pred EEE-CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHH
Confidence 888 46688899999987779999887532 245689999988887765543
No 15
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3.5e-39 Score=293.88 Aligned_cols=325 Identities=15% Similarity=0.135 Sum_probs=262.9
Q ss_pred cccccCCCCCChHHHHHHHccCCCCCC----------CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNEDYR----------SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~~~----------~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
+|++.++++++|+.+++++.++...+. +..+.+..+++|+.+++++|.++. ++++++|+|++++.++.+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKG 79 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 588999999999999999987542211 122356688999999999999764 599999999998877654
Q ss_pred ----cCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc
Q 017726 80 ----TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 80 ----~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
+..+|++|++++.+|++.. + ..++..|++++.++.+.++.+|+++++++++ ++++++++++++|+||.+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~-~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~----~~t~lv~v~~~~n~tG~~ 154 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSC-RHLQQEGFEVTYLPVKSDGLVDLDELAAAIR----PDTALVSVMAVNNEIGVI 154 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHH-HHHHhcCCEEEEEccCCCCcCCHHHHHHhcC----CCcEEEEEECCCCCceec
Confidence 3578999999998888863 4 3334679999999988788899999999997 467999999999999999
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
.|+++|.++||+ +|+++++|++|+.+..++++..+++|++++|+||| .||.|+|+++++++...++.+...... .
T Consensus 155 ~~l~~I~~~~~~--~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~~~g~~-~- 229 (364)
T PLN02651 155 QPVEEIGELCRE--KKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPLMSGGG-Q- 229 (364)
T ss_pred ccHHHHHHHHHH--cCCEEEEEcchhhCCcccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCccccCCC-c-
Confidence 999999999999 99999999999999999999999999999999998 589999999999987666554322111 0
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-c-CCccccCC-CccCCCceEE
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQK-EEWFSDTVTA 310 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~-~~~~~~~~~~ 310 (367)
..++ ..+|+++..++++.++++++.+. .+++.++..++++++.+.|++ . |++++.+. +..+...++.
T Consensus 230 ----~~~~-----~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~ 299 (364)
T PLN02651 230 ----ERGR-----RSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN 299 (364)
T ss_pred ----cCCc-----cCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence 0122 35579999999999999999875 588999999999999999986 4 88888863 3334566888
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecCCCCHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~-------------------~~~~iRi~~~~~~~~~~~ 359 (367)
|.+ .+.+.+++.++|. + |.++.|..+. ..+.+|+|++.+++++|+
T Consensus 300 ~~~-~~~~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 300 LSF-AYVEGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred EEe-CCCCHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 888 4778889999994 3 8887775321 135799999889888875
No 16
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-39 Score=292.42 Aligned_cols=330 Identities=21% Similarity=0.214 Sum_probs=260.1
Q ss_pred ccccCCCCCChHH-HHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHHHHHccCCCCCe
Q 017726 11 HLFVPGPVHIPDQ-VIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 11 ~~~~~~p~~~~~~-v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~ggt~al~~~~~~~~~~gd~ 86 (367)
++|.|||..+++. |++++.+.... |+++.+.+.++++|+.+++++|.+++++++++ +|||++++.++.+++.+++.
T Consensus 14 ~~f~~Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~ 93 (378)
T PRK03080 14 PRFSSGPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRV 93 (378)
T ss_pred CCcCCCCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcc
Confidence 5699999999998 99999987654 88889999999999999999999765557776 48999999999998764333
Q ss_pred EEEEeCCcchHHHHH-HHHHhCC-ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 87 IISFLIGQFSLLWID-QQQRLNF-NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 87 vl~~~~~~~~~~~~~-~~~~~g~-~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
+++. .+.|+.+|.. .++..|+ +++.++.+.++.+|++++ + .+++|.++|.+|.||.+.|+++|.+ +
T Consensus 94 ~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i----~-----~~~~V~~~h~~t~tG~~~pi~~I~~--~ 161 (378)
T PRK03080 94 DHLA-WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAV----D-----FDRDVVFTWNGTTTGVRVPVARWIG--A 161 (378)
T ss_pred eEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhc----C-----CCCCEEEEecCCccceeccchhhcc--c
Confidence 3333 4567777765 4467899 999999887777787763 2 1367999999999999999999988 6
Q ss_pred hcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCC---ceeechHH----H
Q 017726 165 EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV---RVFFDWKD----Y 237 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~---~~~~~~~~----~ 237 (367)
+ +|+++++|++|+++..++++.+ +|++++|+|||+++|+|+|+++++++.++++.+...+ ..++++.. .
T Consensus 162 ~--~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 237 (378)
T PRK03080 162 D--REGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAI 237 (378)
T ss_pred c--CCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHh
Confidence 6 8999999999999999999985 7999999999999999999999999999887764322 12333222 2
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
..+++.++ ++|+++..+.++.++++++.++ |++++.++.+++++++++.|++++ +.++.+.+..++..++.|++++
T Consensus 238 ~~~~~~~t--~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~ 315 (378)
T PRK03080 238 ENSFKGQT--INTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVD 315 (378)
T ss_pred hhhhcCCc--ccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCC
Confidence 23445454 7889999999999999999998 899999999999999999999984 6666543333565688888864
Q ss_pred ---CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 316 ---HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 316 ---~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+. ..++...|.++ ++.++.|.....++.+|+|++++++.+|++
T Consensus 316 ~~~~~-~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~ 361 (378)
T PRK03080 316 AQAAV-DAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVE 361 (378)
T ss_pred chHHH-HHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHH
Confidence 22 33566777655 888876543323568999999888776554
No 17
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=9e-38 Score=289.02 Aligned_cols=343 Identities=18% Similarity=0.194 Sum_probs=269.1
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCC-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~ 78 (367)
.+|++..+..++|+.+++++.+.... +.+. ......+++|+.+++++|+++++++++++|+++++.+++.
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAY 98 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 38999999999999999999875321 2111 2345688999999999999855569999999999998887
Q ss_pred cc----CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 79 NT----LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 79 ~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
++ +.+||.|++++++|++.. +...++..|++++.++.+.++.+|+++++++++ +++++|++++++|+||.
T Consensus 99 ~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~----~~~~lv~~~~~~~~tG~ 174 (403)
T TIGR01979 99 SWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT----EKTKLVAITHVSNVLGT 174 (403)
T ss_pred HhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc----cCCeEEEEEcccccccc
Confidence 63 578999999999988864 556677889999999998888899999999997 46799999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+.|+++|.++|++ +|+++++|++|+.+..++++...++|++++|+||++ ||.|+|++++++++++++.+........
T Consensus 175 ~~~~~~i~~~~~~--~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~~~~~~~~g~~~~ 251 (403)
T TIGR01979 175 VNPVEEIAKLAHQ--VGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEELLEQMPPFLGGGEMI 251 (403)
T ss_pred cCCHHHHHHHHHH--cCCEEEEEchhhcCccccCccccCCCEEEEeccccc-CCCCceEEEEchHHHhcCCCeecCCCce
Confidence 9999999999999 999999999999988888888788999999999976 6999999999999887775432211000
Q ss_pred c--------hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc
Q 017726 233 D--------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW 303 (367)
Q Consensus 233 ~--------~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 303 (367)
+ +.....+++.| +++...++++.++++.+.+.|+++++++..++++++.+.|+++ |++++.+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~g-----t~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~ 326 (403)
T TIGR01979 252 AEVSFEETTYNEAPHKFEAG-----TPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAE 326 (403)
T ss_pred eecccCccccCCChhhcCCC-----CccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcc
Confidence 0 11111334433 5888899999999999988899999999999999999999987 88887753222
Q ss_pred CCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--------CCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--------VAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--------~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
....++.|.++ +.+..++.+.|. +.||.++.|... ..+.++|||++.+++.+ +.+..+|+
T Consensus 327 ~~~~~v~~~~~-~~~~~~~~~~L~-~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 327 DRGGIISFNVE-GVHPHDVGTILD-EEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred ccCceEEEEeC-CcCHHHHHHHHh-hCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 33457778874 566778888886 559999876421 12467999987666544 44444443
No 18
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=1e-37 Score=281.44 Aligned_cols=331 Identities=15% Similarity=0.152 Sum_probs=262.3
Q ss_pred CcccccCCCCCChHHHHHHHccCC------------CCCCCCcHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWES 75 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~ggt~al~~ 75 (367)
+.++|.|||..+|++|++++.+.. ..|+++.+.+.++++++.++++++.++. +.+++++||+.+++.
T Consensus 3 ~~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea 82 (360)
T PRK05355 3 RVYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAM 82 (360)
T ss_pred ceeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHH
Confidence 578999999999999999998864 3577888999999999999999998543 444566788899999
Q ss_pred HHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHH-HHhccCCCCccEEEEEecCCCcccc
Q 017726 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLAS-KLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~-~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
++.+++.+|+++++...+.|+.+|..+++..|.. ..+..+. .+..+..++++ +++ +++++|.++|..|+||..
T Consensus 83 ~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~----~~~~~V~~th~eTstGv~ 157 (360)
T PRK05355 83 VPMNLLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS----DDAAYVHYTSNETIDGTE 157 (360)
T ss_pred HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC----CCCCEEEEccCCCcceEe
Confidence 9999999999999999999999999999999965 6666554 34445555555 665 357999999999999999
Q ss_pred c-cHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 154 N-NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 154 ~-~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
. |+.++ +|+++++|+++++++.+++++++ |++++|+||++ ||+|+|+++++++.++++.+. . ..++
T Consensus 158 ~~~i~~i--------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~l-gP~Glg~l~~s~~~l~~~~~~-~-~~~~ 224 (360)
T PRK05355 158 FHELPDT--------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNI-GPAGLTIVIVREDLLGRALPS-I-PSML 224 (360)
T ss_pred cCccccc--------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccc-cCCceEEEEECHHHHhhcccC-C-ChHH
Confidence 8 66554 68999999999999999999865 69999999998 599999999999999887653 1 2344
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcCCc-cccCCCccCCCceEE
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLK-NCTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~ 310 (367)
++..... ...+++||++..++++.++++++.++ |++++.++.+++++++++.|+++++. ... .+..+++.+++
T Consensus 225 ~~~~~~~----~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~-~~~~rs~~v~s 299 (360)
T PRK05355 225 DYKTHAD----NDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPV-APEDRSRMNVP 299 (360)
T ss_pred HHHHHHh----cCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC-ChhhcCCcEEE
Confidence 4333221 12247899999999999999999999 79999999999999999999999742 222 22336767899
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
|.++++.+..++.+.+.+ .|+.+..+.. ..+.+|+|++++++.+ |.+.++|+
T Consensus 300 f~~~~~~~~~~~~~~~~~-~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~ 353 (360)
T PRK05355 300 FTLADEELDKKFLAEAKA-AGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMK 353 (360)
T ss_pred EEcCChHHHHHHHHHHHH-CCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHH
Confidence 998765444667677754 5999866653 2367999998887655 44444444
No 19
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=1.3e-37 Score=287.60 Aligned_cols=334 Identities=18% Similarity=0.195 Sum_probs=263.4
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
.+|++++|+.++|+.+++++.+.... ...+. ..+..+++++.+++++|.+++ ++++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-EVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 48999999999999999999875421 11222 235678999999999999865 499999999998876655
Q ss_pred c---CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc
Q 017726 80 T---LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 80 ~---~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
+ +++||+|++.+++|++.. |...++..|++++.++.+. ++.+|+++++++++ +++++|++++++||||.+
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~----~~~~lv~i~~~~n~tG~~ 172 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS----PRTRLVAVTAASNTLGSI 172 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC----CCceEEEEeCCCCCCCcc
Confidence 4 689999999999988864 5566788899999999875 67889999999997 467999999999999999
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
.|+++|.++|++ +|+++++|++|..+..++++.+.++|++++|+||++ |++ +|++++++++++++.+..... .
T Consensus 173 ~~~~~i~~~~~~--~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~-~G~l~~~~~~~~~l~~~~~~~-~-- 245 (397)
T TIGR01976 173 VDLAAITELVHA--AGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFF-GPH-MGILWGRPELLMNLPPYKLTF-S-- 245 (397)
T ss_pred CCHHHHHHHHHH--cCCEEEEehhhhccccCCCHHHcCCCEEEEechhhc-CCc-eEEEEEcHHHHhhCCCccccC-c--
Confidence 999999999999 999999999998887777777788999999999998 565 799999999988776543211 1
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC--------------hHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG--------------LENVIERHRRLGKATRLAVEAW-GLKNCT 298 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g--------------~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (367)
+.....+++.| |+++..++++.++++.+.+.| ++++.++..++++++++.|+++ +++++.
T Consensus 246 ~~~~~~~~~~g-----t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 320 (397)
T TIGR01976 246 YDTGPERFELG-----TPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYG 320 (397)
T ss_pred cCCCcchhcCC-----CCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 11122345544 588888899999999988765 5677888899999999999998 588877
Q ss_pred CCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-----------CCCcEEEEeecCCCCHHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-----------VAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~-----------~~~~~iRi~~~~~~~~~~~~~ 361 (367)
+.+......++.+.+ ++.+..++.++|.++ ||.++.+..+ ..+.++|||++.+++++|+..
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~ 392 (397)
T TIGR01976 321 VARLAARVPTVSFTV-HGLPPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDR 392 (397)
T ss_pred CCCccCCCceEEEEe-CCcCHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHH
Confidence 522222334666776 456778899999654 9999876321 234679999999888776554
No 20
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=2.6e-37 Score=283.22 Aligned_cols=336 Identities=19% Similarity=0.225 Sum_probs=267.5
Q ss_pred cccccCCCCCChHHHHHHHccCCCC-----CCC-----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
+|++..+-.++|+.+++++.++... +++ +...+...++++.+++++|.++++++++++|+++++..++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 4778888889999999999876311 221 234567889999999999998445699999999999999988
Q ss_pred cCC---CCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 80 TLS---PGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 80 ~~~---~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
+.. +|++|++++++|++.. +...++..|++++.++.+.++.+|++++++++. +++++|++++++||||.+.
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~~~tG~~~ 156 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLT----ERTKLVAVTHVSNVLGTIN 156 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhc----CCceEEEEeCcccccCCcC
Confidence 776 8999999999888853 445666789999999998788899999999997 4679999999999999999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee--
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF-- 232 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~-- 232 (367)
|+++|.++|++ +|+++++|++++.+..++++...++|++++|+||++++ .|+|++++++++++++.+........
T Consensus 157 ~~~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~~~~~~g~~~~~~ 233 (373)
T cd06453 157 PVKEIGEIAHE--AGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEEMPPYGGGGEMIEE 233 (373)
T ss_pred CHHHHHHHHHH--cCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhcCCCeecCCCcccc
Confidence 99999999999 99999999999988888887777899999999999975 88999999999988877543221110
Q ss_pred ------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCC
Q 017726 233 ------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFS 305 (367)
Q Consensus 233 ------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 305 (367)
.+.....+ +...+++...++++.++++++.+.|++++.++..++++++++.|+++ +++++.+. . ..
T Consensus 234 ~~~~~~~~~~~~~~-----~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~-~~ 306 (373)
T cd06453 234 VSFEETTYADLPHK-----FEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA-E-DR 306 (373)
T ss_pred ccccccccCCCccc-----cCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc-c-cc
Confidence 01111111 22346888888999999999999999999999999999999999998 77877432 1 23
Q ss_pred CceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHHHHH
Q 017726 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~ 361 (367)
..+++|.++ +.+..++.++|.+ +||.+.+|.... .+.++|+++...++++|+++
T Consensus 307 ~~~~~~~~~-~~~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~ 368 (373)
T cd06453 307 AGVVSFNLE-GIHPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDA 368 (373)
T ss_pred CCeEEEEEC-CcCHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHH
Confidence 457788874 5677899999965 599998765321 24679999887777666554
No 21
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-37 Score=268.92 Aligned_cols=326 Identities=17% Similarity=0.179 Sum_probs=263.5
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCC---------CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR---------SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
.+|+++...+++.++|+++|..+....+ +.......++.|+.+|+++|+++ ++|+||+|||+++++++.+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~g 80 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIKG 80 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-CeEEEecCCcHHHHHHHHh
Confidence 4789999999999999999998654321 12345778999999999999998 4599999999999999876
Q ss_pred c--C----CCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 80 T--L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 80 ~--~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
. . ..|.+++++.-+|++.. .....+..|+++.+++++.+|.+|+|+|+++|. ++|.+|.+.+.||-+|+
T Consensus 81 ~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~----~~T~LVSim~aNnE~G~ 156 (386)
T COG1104 81 AALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR----PDTILVSIMHANNETGT 156 (386)
T ss_pred hHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC----CCceEEEEEecccCeee
Confidence 2 1 25779999999999975 333446679999999999999999999999999 46799999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+.|+++|.++|++ +++++++|++|++|-.++++...++|++++|+||. .||.|+|.++.++.. ++.+...++.
T Consensus 157 IQpI~ei~~i~k~--~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~-~GpkGiGaLyv~~~~--~~~p~i~GGg-- 229 (386)
T COG1104 157 IQPIAEIGEICKE--RGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKF-GGPKGIGALYVRPGV--RLEPLIHGGG-- 229 (386)
T ss_pred cccHHHHHHHHHH--cCCeEEEehhhhcCceeccccccCcceEEeehhhc-cCCCceEEEEECCCC--ccCceeccCc--
Confidence 9999999999999 99999999999999999999998999999999995 489999999997765 3333222111
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEE
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~ 310 (367)
+...++ ++|.|+.+++++..|++...+. ++...++...++++|.+.|.+. ++.+.. ++..+.++++.
T Consensus 230 ----QE~g~R-----sGTenv~~Ivg~~~A~~~a~~~-~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g-~~~~rlP~~~~ 298 (386)
T COG1104 230 ----QERGLR-----SGTENVPGIVGFGKAAEIAVEE-LEEENARLRKLRDRLEDGLLEIIPDVYLNG-DDEPRLPNILN 298 (386)
T ss_pred ----CCCCCC-----CCCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcEEEcC-CcccCCCCeEE
Confidence 111223 4469999999999999998776 7788889999999999999986 444444 33557888888
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCC-------------------cEEEEeecCCCCHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAG-------------------KVFRIGHLGHLNEVMF 359 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~-------------------~~iRi~~~~~~~~~~~ 359 (367)
|.+ .++..+.+...| +..||++..|..+..+ ..+|+|+.-..+++|+
T Consensus 299 ~~f-~gv~gE~ll~~L-~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei 364 (386)
T COG1104 299 FSF-PGVEGESLLLAL-DLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEI 364 (386)
T ss_pred EEe-CCCcHHHHHHhc-cccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHH
Confidence 998 578888888888 4569999998764322 4699997555555443
No 22
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=100.00 E-value=1.5e-36 Score=274.50 Aligned_cols=330 Identities=18% Similarity=0.216 Sum_probs=258.2
Q ss_pred cccccCCCCCChHHHHHHHccCC-----CCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEec-CChhHHHHHHHHccCCC
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNN-----EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP-TTGTGAWESALTNTLSP 83 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~-----~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~-~ggt~al~~~~~~~~~~ 83 (367)
.--|.|||..++++|++++.+.. .+|+++.+.+.++++|+.++++++++++++|+|+ +|||.+++.++.+++.+
T Consensus 4 ~~~f~pGP~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~ 83 (361)
T TIGR01366 4 DGRFGSGPSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK 83 (361)
T ss_pred CCcccCCCcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc
Confidence 34589999999999999998752 4689999999999999999999999765567775 67999999999988643
Q ss_pred CCeEEEEeCCcchHHHHHHHHHh--CCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHH
Q 017726 84 GDRIISFLIGQFSLLWIDQQQRL--NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (367)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~--g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~ 161 (367)
++++...+.|+.++...++.. +.++..++.+.+..++. .+. +++++|+++|.+|.||.+.|+++|
T Consensus 84 --~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~lV~~~h~et~tG~~~pi~~I-- 150 (361)
T TIGR01366 84 --KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD----PGVDVIAWAHNETSTGVAVPVRRP-- 150 (361)
T ss_pred --cccEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC----CCCCEEEEcccCCccceecccccc--
Confidence 344444677887776767652 23677777665443333 223 578999999999999999999887
Q ss_pred HHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc----eeechHHH
Q 017726 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR----VFFDWKDY 237 (367)
Q Consensus 162 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 237 (367)
+|+ +|+++++|+++++++.+++++. +|++++|+||++++++|+++++++++.++++.+..... .++++...
T Consensus 151 -~~~--~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~ 225 (361)
T TIGR01366 151 -EGS--DDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTA 225 (361)
T ss_pred -ccc--CCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHH
Confidence 577 9999999999999999999884 89999999999987888899999999998887544321 24444443
Q ss_pred HH-HhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcC
Q 017726 238 IK-FYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 238 ~~-~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~ 314 (367)
.. .++.++ ++|+++..++++.++++++.++ |++.+.++.+++++++++.|++++ ++++.......+..+..+.++
T Consensus 226 ~~~~~~~~t--~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~ 303 (361)
T TIGR01366 226 VDNSLKNQT--YNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV 303 (361)
T ss_pred HhccccCCC--CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC
Confidence 32 223343 8899999999999999999998 599999999999999999999985 565543222233344555556
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
++.+.+++.+.|.+ +||.+.++.....+..+|||.+++++.+|+.
T Consensus 304 ~g~~~~~v~~~L~~-~gI~i~~~~~~l~~~~vRis~~~~~t~~di~ 348 (361)
T TIGR01366 304 DDIDAATVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAIDPDDVE 348 (361)
T ss_pred CccCHHHHHHHHHH-CCCeeccCccccCCCcEEEEcCCCCCHHHHH
Confidence 78899999999965 4999988776666678999999988766554
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=1.3e-36 Score=278.90 Aligned_cols=327 Identities=16% Similarity=0.152 Sum_probs=255.1
Q ss_pred cccccCCCCCChHHHHHHHccCCCC-----CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+|++.++.+++|+.+++++.++... +.. ..+.+..+++|+.+++++|++++ ++++++|+|+++..++.++
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHH
Confidence 4788999999999999999875321 111 22356788999999999999754 5999999999999888764
Q ss_pred C---CCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH
Q 017726 81 L---SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (367)
Q Consensus 81 ~---~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~ 156 (367)
. .+++.|++...+|++.. ....++..|++++.++.+.++.+|+++++++++ ++++++++++++|+||.++|+
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~~ 155 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT----DDTALVSVMWANNETGTIFPI 155 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC----CCcEEEEEEcccCCeeecccH
Confidence 3 45688888888888764 224445579999999988778899999999997 467999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 157 SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 157 ~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++|.++|++ +|+++++|++|+.+..++++...++|++++|+|| +.||.|+|+++++++. .+.+..... ..
T Consensus 156 ~~I~~l~~~--~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~--~~~p~~~g~-~~---- 225 (379)
T TIGR03402 156 EEIGEIAKE--RGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGT--RFRPLLRGG-HQ---- 225 (379)
T ss_pred HHHHHHHHH--cCCEEEEECcccccccccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCC--CCCCcccCC-cc----
Confidence 999999999 9999999999999999999988899999999999 5689999999998764 222221110 00
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCCceEEEEcC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
.... ..+|+++..+.++.++++.+.+. ++++.++..++++++.+.|++ + ++.+..+.. .+.+.++.|.+
T Consensus 226 -~~~~-----~~gt~~~~~~~~l~~al~~~~~~-~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~- 296 (379)
T TIGR03402 226 -ERGR-----RAGTENVPGIVGLGKAAELATEH-LEEENTRVRALRDRLEAGLLARIPDARLNGDPT-KRLPNTVNISF- 296 (379)
T ss_pred -CCCc-----CCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCc-cCCCCEEEEEe-
Confidence 0111 24569999999999999998764 788889999999999999986 6 777766432 23334666766
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCC-------------------CcEEEEeecCCCCHHHHHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKVA-------------------GKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~~-------------------~~~iRi~~~~~~~~~~~~~ 361 (367)
.+.+..++.+.|. ++||.++.|..+.. .+.+|+|++.+++++|++.
T Consensus 297 ~~~~~~~~~~~l~-~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~ 361 (379)
T TIGR03402 297 EYIEGEAILLLLD-MEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDY 361 (379)
T ss_pred cCCCHHHHHHhhc-cCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHH
Confidence 4567889999885 55999998754211 3579999988887766543
No 24
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=2.7e-36 Score=277.01 Aligned_cols=326 Identities=14% Similarity=0.154 Sum_probs=253.7
Q ss_pred cccccCCCCCChHHHHHHHccCCCC-----CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+|++.++.+++|+.+++++.++... ... .......+++|+.+++++|.+++ +|++++|+++++..++.++
T Consensus 2 ~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHH
Confidence 6889999999999999999764421 111 12346688999999999998764 5999999999999887765
Q ss_pred C----CCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 81 L----SPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 81 ~----~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
+ .+|+.|++...+|+++. +...++..|+++..++.+.++.+|+++++++++ +++++|++++++||||.+.|
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT----PDTVLASIQHANSEIGTIQP 156 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC----CCCEEEEEECCcCCcEeehh
Confidence 4 57899999888888864 335667789999999998778899999999987 46799999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechH
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+++|.++|++ +|+++++|++++++..++++..+++|++++|+||++ ||+|+|+++++++. .+.......
T Consensus 157 ~~~I~~l~~~--~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~--~~~~~~~~~------ 225 (381)
T PRK02948 157 IAEIGALLKK--YNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQV--RWKPVFPGT------ 225 (381)
T ss_pred HHHHHHHHHH--cCCEEEEEChhhccccccCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCC--CCCCcccCC------
Confidence 9999999999 999999999999998888888889999999999976 69999999998774 111110000
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCC-CccCCCceEEEEcC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQK-EEWFSDTVTAVIVP 314 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~~~~ 314 (367)
...+.+.+++++...++++.++++.+.+. +++++++..++++++.+.|+++|+++.... .......++.|.+
T Consensus 226 -----~~~~~~~~~t~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~- 298 (381)
T PRK02948 226 -----THEKGFRPGTVNVPGIAAFLTAAENILKN-MQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTI- 298 (381)
T ss_pred -----CCCCCcCCCCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEe-
Confidence 01122346789999999999999887653 788899999999999999999887655432 2223344566666
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecCCCCHHHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~-------------------~~~~iRi~~~~~~~~~~~ 359 (367)
++.+.+++.+.|. ++||.++.|..+. .+..+|||+..+++++|+
T Consensus 299 ~~~~~~~~~~~l~-~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di 361 (381)
T PRK02948 299 KGIEGQYTMLECN-RRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQI 361 (381)
T ss_pred CCCCHHHHHHhcc-cCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHH
Confidence 4567788888884 5599999765311 135799998766665543
No 25
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=100.00 E-value=7.9e-36 Score=267.21 Aligned_cols=331 Identities=20% Similarity=0.218 Sum_probs=267.4
Q ss_pred cccCCCCCChHH-HHHHHccCC--CCCCCCcHHHHHHHHHHHHHHHhcCCCC-ceEEecCChhHHHHHHHHccC-CCCCe
Q 017726 12 LFVPGPVHIPDQ-VIRAMNRNN--EDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGTGAWESALTNTL-SPGDR 86 (367)
Q Consensus 12 ~~~~~p~~~~~~-v~~a~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~ggt~al~~~~~~~~-~~gd~ 86 (367)
.|+|||..+.+. ..+++.+.. .+|+++.+.+++.++++.++++++.+.. +.+++++|||.++++++.+++ .+|++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~ 85 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVD 85 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCe
Confidence 499999999887 788887643 4599999999999999999999998643 446779999999999999988 58888
Q ss_pred EEEEeCCcchHHHH-HHHHHhCC-ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 87 IISFLIGQFSLLWI-DQQQRLNF-NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 87 vl~~~~~~~~~~~~-~~~~~~g~-~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
+++. +.|+.+|. .+++..|+ ++..+..+.+..+|+++++. + +.|+++|..++||+..|++++. +
T Consensus 86 vLv~--g~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~-------~~v~~vhnETSTGv~npv~~i~---~ 151 (374)
T TIGR01365 86 VLAW--ESFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K-------NDVVFTWNGTTSGVRVPNGDFI---P 151 (374)
T ss_pred EEEE--CHHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C-------CCEEEecCCCchheeccccccc---c
Confidence 8874 58999987 99999999 58888887777889999872 1 2378999999999999987555 3
Q ss_pred hcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCC---ceeechHHH---H
Q 017726 165 EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV---RVFFDWKDY---I 238 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~ 238 (367)
+. +++++++|+.+++++.+++++ ++|+++++++|++++|+|+++++++++.+++....... ..++++... .
T Consensus 152 ~~-~~~lliVDavSs~g~~~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~ 228 (374)
T TIGR01365 152 AD-REGLTICDATSAAFAQDLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLN 228 (374)
T ss_pred cc-CCCcEEEEccchhcCCCCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchh
Confidence 22 478999999999999999998 49999999999999999999999999999886643210 011221111 1
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
..+..+ ++++||++..+.++..+++++.++ |++.+.+++.++++.+++.++++| +.+...++..+++.++.+.++.+
T Consensus 229 ~~~~~~-~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~ 307 (374)
T TIGR01365 229 KKIFEG-STINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDP 307 (374)
T ss_pred hhhhcC-CCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCc
Confidence 111222 468999999999999999999886 799999999999999999999998 77766445557888888887543
Q ss_pred -C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHH
Q 017726 317 -I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 317 -~-----~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~ 361 (367)
+ + .+++.+.|+++ ||.+.+|.....+..||||.++..+.+|+..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~ 362 (374)
T TIGR01365 308 AIDALDEDAQADFAKELISTLEKE-GVAYDIGSYRDAPSGLRIWCGATVEKSDLEC 362 (374)
T ss_pred cccccccchhhHHHHHHHHHHHHC-CEEEeccccccCCCceEEecCCcCCHHHHHH
Confidence 4 3 67899999765 9999999888778899999999988877654
No 26
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=3.2e-35 Score=269.85 Aligned_cols=327 Identities=13% Similarity=0.100 Sum_probs=249.1
Q ss_pred cccccCCCCCChHHHHHHHccCCCC-----CCCCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 10 NHLFVPGPVHIPDQVIRAMNRNNED-----YRSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 10 ~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+|++.++.+++++.|++++.++... +.... .....++.++.+++.++..++++|++|+|+++++..++.++
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~ 80 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGV 80 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHH
Confidence 4788899999999999999885432 11111 12334455555565666644456999999999999988764
Q ss_pred C-----CC-CCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc
Q 017726 81 L-----SP-GDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 81 ~-----~~-gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
. .+ +++|+++..+|+++. ....++..|++++.++.+.++.+|+++++++++ ++++++++++++||||.+
T Consensus 81 ~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~----~~t~lv~~~~~~n~tG~~ 156 (382)
T TIGR03403 81 YFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT----EKTALVSVMWANNETGMI 156 (382)
T ss_pred HHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc----cCCeEEEEEcccCCCccc
Confidence 2 45 467999988888765 334567789999999998888899999999997 467999999999999999
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
.|+++|.++|++ +|+++++|++++.+..++++..+++|++++|+||++ ||+|+|++++++.. .+.+........
T Consensus 157 ~~~~~I~~la~~--~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~G~g~l~vr~~~--~~~p~~~g~~~~- 230 (382)
T TIGR03403 157 FPIKEIGEICKE--RGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFH-GPKGVGGLYIRKGV--ELTPLFHGGEHM- 230 (382)
T ss_pred cCHHHHHHHHHH--cCCEEEEechhhcCCCccCccccCCCEEEEcchhhC-CCCceEEEEECCCC--CCCCcccCCCCC-
Confidence 999999999999 999999999999998888888889999999999975 79999999998764 222211110000
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEE
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 312 (367)
..+.+++++...++++..+++...+. ++.+.++..++++++.+.|+++ |+.+..+.. .+.+.++.|.
T Consensus 231 ----------~~~~~gt~~~~~~~al~~al~~~~~~-~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~~ 298 (382)
T TIGR03403 231 ----------GGRRSGTLNVPYIVAMGEAMRLANEY-LDFEKSHVRRLRDRLEDALLELPDVFVVGDRE-HRVPNTILIS 298 (382)
T ss_pred ----------CCcccCCcChHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHhcCCCEEEECCCC-CCcCCEEEEE
Confidence 11225679999999999999877664 7888899999999999999987 788877532 2444466777
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCC-------------------CCCcEEEEeecCCCCHHHHH
Q 017726 313 VPSHINSSEIVRRAWQRYNLSLGLGLNK-------------------VAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~gv~v~~g~~~-------------------~~~~~iRi~~~~~~~~~~~~ 360 (367)
+ ++.+..++.+.|. ++||.++.|..+ ..++.+|+|++.+++.+|++
T Consensus 299 ~-~~~~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did 363 (382)
T TIGR03403 299 I-KGVEGEAMLWDLN-KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEID 363 (382)
T ss_pred e-CCCCHHHHHHhhc-cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHH
Confidence 7 5778888888885 559999976432 11356999998887766544
No 27
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=2.4e-35 Score=266.83 Aligned_cols=331 Identities=18% Similarity=0.183 Sum_probs=246.2
Q ss_pred ccccCCCCCChHHHHHHHccCC------------CCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCC-hhHHHHHHH
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTT-GTGAWESAL 77 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g-gt~al~~~~ 77 (367)
++|.|||..+|+.|++++.++. ..+++..+.+.++++|+.+++++|++.++.++|++| +|++++.++
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~ 80 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVP 80 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHH
Confidence 4699999999999999998875 234556677899999999999999866566888877 999999999
Q ss_pred HccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCC-C-HHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGA-K-LDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-d-~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
.+++.++++......+.|+.++..+++..|++++.++.+.++.. + ++..+..++ +++++|.++|.+|.||...+
T Consensus 81 ~~l~~~~~~~~~i~~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 81 LNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA----PDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred HhcCCCCCeEEEEECCHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC----CCCCEEEEeCCcccccEEcc
Confidence 99877555544444566777777788999999999998654333 4 222223333 57899999999999999843
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechH
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
++++. +|+++++|+++++++.++|+.+++ ++++|+||++ ||+|+|+++++++.++++.+.. + ...++.
T Consensus 157 -----~i~~~--~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~l-GP~G~g~l~~~~~~~~~~~~~~-~-~~~~~~ 224 (355)
T cd00611 157 -----EVPDT--GGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNL-GPAGVTVVIVRKDLLGKARKIT-P-SMLNYK 224 (355)
T ss_pred -----eeccc--CCCeEEEEccccccCCCCCHHHhC--EEEeeccccc-CCCceEEEEECHHHHhhcccCC-C-CcccHH
Confidence 45666 899999999999999999998755 5667799987 6999999999999998876532 1 122222
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEc
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (367)
.... .+ .+++||++..++++.++++++.++ |++.+.++.+++++++++.|+++ |+.....++..+++.++.|++
T Consensus 225 ~~~~---~~-~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~ 300 (355)
T cd00611 225 THAD---NN-SLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRL 300 (355)
T ss_pred HHHh---cC-CCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEc
Confidence 1111 12 136789999999999999999999 79999999999999999999999 853122122235656688887
Q ss_pred CCCC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH--HHhhhh
Q 017726 314 PSHI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF--NFQLLF 365 (367)
Q Consensus 314 ~~~~-~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~--~~~~l~ 365 (367)
+ +. ...++...+. +.|+.+.++.. ..+.+|+|++.+++.+|+ +.++|+
T Consensus 301 ~-~~~l~~~~~~~~~-r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~ 351 (355)
T cd00611 301 G-KEELEKEFLKEAE-AAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMK 351 (355)
T ss_pred C-ChhhhHHHHHHHH-HCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHH
Confidence 4 42 1244445554 45887555543 235799999887776554 444444
No 28
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-36 Score=270.32 Aligned_cols=325 Identities=18% Similarity=0.139 Sum_probs=241.8
Q ss_pred CcccccCCCC--CChHHHHHHHccCCCCCC-CCcHHHHHHHHHHHHHHHhcC------CCCceEEecCChhHHHHHHHHc
Q 017726 9 KNHLFVPGPV--HIPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKT------TSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 9 ~~~~~~~~p~--~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~------~~~~~v~~~~ggt~al~~~~~~ 79 (367)
..+.++-|-+ +.|+.+.+++.+...... .|....+..++|+.+++++.. +++++|++|+|+++|+..++.+
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 4667777655 778888888888544321 232456666777777766542 2445599999999999999999
Q ss_pred cCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC---CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-
Q 017726 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD---WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (367)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~- 155 (367)
+++|||+|++++|.|.++. ...+..|.+++.+++. .++.+|+++++++++ ++||+|++++||||||.+++
T Consensus 109 ~~~pGDeVlip~P~Y~~y~--~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~----~ktk~i~ln~P~NPTGav~~~ 182 (393)
T COG0436 109 LLNPGDEVLIPDPGYPSYE--AAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT----PKTKAIILNSPNNPTGAVYSK 182 (393)
T ss_pred hcCCCCEEEEeCCCCcCHH--HHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC----ccceEEEEeCCCCCcCcCCCH
Confidence 9999999999999888764 5577889999999974 378999999999999 57899999999999999996
Q ss_pred --HHHHHHHHHhcCCCcEEEEeeeeccCcee----e---cccc-ccceEEEecCCCcccCCCc--ceeeeeC-HHHHHHh
Q 017726 156 --LSKVRKLLDEYRHPALFLVDGVSSICAID----F---RMDE-WGIDVALTGSQKALSLPTG--MGIVCAS-PKALEAS 222 (367)
Q Consensus 156 --~~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~---~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~-~~~~~~~ 222 (367)
+++|.++|++ ||++||+|++|...... . .... ...-+.+.|+||.++ .+| +|+++++ +++++.+
T Consensus 183 ~~l~~i~~~a~~--~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~-mtGwRvG~~v~~~~~l~~~~ 259 (393)
T COG0436 183 EELKAIVELARE--HDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG-MTGWRIGWVVGPPEELIAAL 259 (393)
T ss_pred HHHHHHHHHHHH--cCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc-ccccceeEeecChHHHHHHH
Confidence 6778888998 99999999998754332 1 1111 135688889999995 666 6999999 7676666
Q ss_pred ccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHc-CCcccc-C
Q 017726 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-GLKNCT-Q 299 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~ 299 (367)
..... .. ...++.....+..++|+.-.+ ..++.+++.++++++.+.+.|.+. |+.+.. |
T Consensus 260 ~~~~~----------------~~--~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p 321 (393)
T COG0436 260 RKLKS----------------YL--TSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPP 321 (393)
T ss_pred HHHHH----------------hc--ccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCC
Confidence 52211 11 112455444445555554322 226677788999999999999998 688887 5
Q ss_pred CCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC---CcEEEEeecCCCCHHHHHHhhh
Q 017726 300 KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA---GKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~l 364 (367)
.+.++++.+++...+..+++++|.+++||.+.||..+.. .+++|+|+....+..+...++|
T Consensus 322 ----~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl 385 (393)
T COG0436 322 ----EGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRL 385 (393)
T ss_pred ----CeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHH
Confidence 467778888865578899999999999999999966543 3789999877664444444443
No 29
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=3.6e-35 Score=270.76 Aligned_cols=329 Identities=14% Similarity=0.122 Sum_probs=251.2
Q ss_pred CCcccccCCCCCChHHHHHHHccCCC-----CCC-CCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNE-----DYR-SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~-----~~~-~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~ 77 (367)
.++|++.+++.++++.+++++.++.. .+. .+. ..+..+++|+.+++++|.+++ ++++++|+|+++..++
T Consensus 3 ~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l 81 (402)
T TIGR02006 3 LPIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAI 81 (402)
T ss_pred ccEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHH
Confidence 36899999999999999999977532 121 111 235688899999999998764 5999999999999887
Q ss_pred Hcc----CCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 78 TNT----LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 78 ~~~----~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
.++ ..+||+|+++.++|++.. ....++..|++++.++.+.++.+|+++++++++ ++++++++++++|+||.
T Consensus 82 ~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~lv~v~~~~n~tG~ 157 (402)
T TIGR02006 82 KGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR----DDTILVSIMHVNNEIGV 157 (402)
T ss_pred HHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC----CCCEEEEEECCCcCcee
Confidence 654 368999999999888764 223445679999999998888899999999997 46799999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+.|+++|.++|++ +|+++++|++++.+..++++...++|++++|+||++ ||.|+|+++++++...++.+.....
T Consensus 158 ~~~~~~I~~l~~~--~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~g~--- 231 (402)
T TIGR02006 158 IQDIAAIGEICRE--RKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY-GPKGIGALYVRRKPRVRLEALIHGG--- 231 (402)
T ss_pred cccHHHHHHHHHH--cCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc-CCCceEEEEEccCCCCCCCceecCC---
Confidence 9999999999999 999999999999999998888889999999999976 6999999999987654444321110
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEE
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAV 311 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 311 (367)
.+..+++ .+|+++..+.++..+++.+.+ +++.+.++.+++++++.+.|+++ ++.+..+. ..+...++.+
T Consensus 232 ---~~~~~~~-----~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~-~~~~p~~~~v 301 (402)
T TIGR02006 232 ---GHERGMR-----SGTLPTHQIVGMGEAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDL-EHRVPGNLNV 301 (402)
T ss_pred ---CccCCcc-----CCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCc-cccCCCeEEE
Confidence 0011223 456999999999999998875 58888999999999999999987 77666532 2133333234
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCC-------------------CCcEEEEeecCCCCHHHHHH
Q 017726 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKV-------------------AGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~-------------------~~~~iRi~~~~~~~~~~~~~ 361 (367)
.++ +.+..++...| .++.++.|.... ..+.+|+|++.+++.+|++.
T Consensus 302 ~f~-~~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~ 366 (402)
T TIGR02006 302 SFN-YVEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDY 366 (402)
T ss_pred EEe-CcCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHH
Confidence 442 34566776655 277777664321 13579999988777655443
No 30
>PLN02452 phosphoserine transaminase
Probab=100.00 E-value=6.9e-35 Score=261.28 Aligned_cols=325 Identities=16% Similarity=0.193 Sum_probs=256.6
Q ss_pred CcccccCCCCCChHHHHHHHccCC------------CCCCCCcHHHHHHHHHHHHHHHhcCCCCce-EEecCChhHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTP-FLIPTTGTGAWES 75 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~-v~~~~ggt~al~~ 75 (367)
+.++|.|||..+|++|++++.+.. .+|+++.+.+..+++++.++++++.++++. +++.+|||.++.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 579999999999999999998863 568999999999999999999999975544 4666888999999
Q ss_pred HHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCC---CCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 76 ALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE---GAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~---~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
++.+++.+|+++++...+.|+.++.+.++..|...+........ .++++++ +.+ +..+.|.+++.++.||+
T Consensus 87 ~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~v~~~hnETstGv 160 (365)
T PLN02452 87 IPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELT--PDAKFVHICANETIHGV 160 (365)
T ss_pred HHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCC--CCCcEEEECCCCCCCcE
Confidence 99999999999999999999999889999998755544322222 3466654 222 46799999999999999
Q ss_pred c-ccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 153 T-NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 153 ~-~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
. .|++++. ++++++|+++++++.++++.++++|+ +|++|.+ ||+|+|+++++++++++.... ...+
T Consensus 161 ~~~~~~~i~--------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~l-GP~Gl~~v~vr~~~l~~~~~~--~~~~ 227 (365)
T PLN02452 161 EFKDYPDVG--------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNV-GPSGVTIVIIRKDLIGNARPI--TPGM 227 (365)
T ss_pred ecCcccccC--------CCeEEEECCccccCcccCHHHcCEEE--Eeccccc-CCCCeEEEEEcHHHHhhcccC--CCch
Confidence 5 6665442 37899999999999999999877655 6999999 699999999999999886532 1234
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (367)
+++....++ + .+++||++..++++..+++++.++ |++.+.++.+++++++++.|++. |+.....++..++...+
T Consensus 228 ~~~~~~~~~---~-s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~v 303 (365)
T PLN02452 228 LDYKIHAEN---D-SLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNV 303 (365)
T ss_pred hhHHHHHhc---C-CccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEE
Confidence 444333222 2 346799999999999999999987 79999999999999999999996 77222222334677788
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
.|.+++....++|.+.++++ |+...+|.....+ +|+|.++..+.++.
T Consensus 304 sF~~~~~~~~~~f~~~~~~~-g~~~~~G~r~~gg--~R~s~yna~~~~~v 350 (365)
T PLN02452 304 PFTLGGSELEAEFVKEAAKA-GMVQLKGHRSVGG--MRASIYNAMPLAGV 350 (365)
T ss_pred EEEcCCchhHHHHHHHHHHC-CCcccCCccccCc--eEEECcCCCCHHHH
Confidence 89986544567888988655 9998888765433 99999997765543
No 31
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=5e-34 Score=256.13 Aligned_cols=321 Identities=15% Similarity=0.166 Sum_probs=246.9
Q ss_pred CChHHHHHHHccCCC------------CCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecC-ChhHHHHHHHHccCCCCC
Q 017726 19 HIPDQVIRAMNRNNE------------DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPT-TGTGAWESALTNTLSPGD 85 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~-ggt~al~~~~~~~~~~gd 85 (367)
..|+.|++++.++.. +|+++.+.+.++++++.++++++.+.++++++++ |||+|+++++.+++.+|+
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 367778888877533 2445677899999999999999986544566664 599999999999998999
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC----CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHH
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~ 161 (367)
++++...+.|+.+|..++++.|+ +..+..++. ..+|+++++ ++ +++++|.++|..|+||...| +
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~v~~th~ETstGv~~~-----~ 149 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--IS----EDAAYVHYCANETIHGVEFR-----E 149 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CC----CCCCEEEEcCCCCcccEecc-----e
Confidence 99999999999999999999999 777775422 234556544 22 47899999999999999887 6
Q ss_pred HHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 162 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+++. +++++++|+++++++.++++++ .|++++|+||++ ||+|+|+++++++.++++.+.. ..+.++.....
T Consensus 150 l~~~--~~~l~iVDavss~g~~~id~~~--~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~--~~~~~~~~~~~-- 220 (349)
T TIGR01364 150 LPDV--KNAPLVADMSSNILSRPIDVSK--FGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRIT--PSMLNYKIHAE-- 220 (349)
T ss_pred eccc--CCCeEEEEccccccCccCCHHH--ccEEEEeccccc-CCCceEEEEECHHHHhhcccCC--CCcchHHHHHh--
Confidence 7777 8999999999999999999986 469999999998 5999999999999998876531 12333311111
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCH
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINS 319 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (367)
.+ .+++||++..++++.++++++.++ |++++.++.+++++++++.|+++ |+.....++..+++.++.|.+++....
T Consensus 221 -~~-~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~ 298 (349)
T TIGR01364 221 -ND-SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELE 298 (349)
T ss_pred -cC-CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHh
Confidence 12 246799999999999999999999 79999999999999999999999 665543322346667788888532123
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH--Hhhhh
Q 017726 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN--FQLLF 365 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~--~~~l~ 365 (367)
.++.+.+. +.|+.+.+|.. ..+.+|+|++++++.+|++ .++|+
T Consensus 299 ~~~~~~~~-~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 299 KRFLKEAE-ERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred HHHHHHHH-HCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHH
Confidence 56656665 45996666654 2358999999987766544 44443
No 32
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=2.8e-34 Score=260.91 Aligned_cols=308 Identities=17% Similarity=0.188 Sum_probs=241.1
Q ss_pred ccccCCCCCChHHHHHHHccCCCC-----CC-CCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNNED-----YR-SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~-----~~-~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
|++.++-.++|+.+++++.++... +. .+. ..+..+++|+.+++++|.+++ ++++++|++++++.++.++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHH
Confidence 567777888999999999775321 11 111 235578999999999999764 5999999999999888776
Q ss_pred C----CCC-CeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 81 L----SPG-DRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 81 ~----~~g-d~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
. .+| +.|++...+|++.. ....++..|++++.++.+.++.+|+++++++++ +++++|++++++||||.+.
T Consensus 80 ~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~ 155 (353)
T TIGR03235 80 ARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR----PDTLLVSIMHVNNETGSIQ 155 (353)
T ss_pred HHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC----CCCEEEEEEcccCCceecc
Confidence 4 355 67888877777764 224456679999999998888899999999987 4679999999999999999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeech
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
|+++|.++|++ +|+++++|++|+++..++++..+++|++++|+||++ ||+|+|+++++++...... ........
T Consensus 156 ~~~~I~~l~~~--~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~~~---~~~~~~~~ 229 (353)
T TIGR03235 156 PIREIAEVLEA--HEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIY-GPKGIGALVIRKRGKPKAP---LKPIMFGG 229 (353)
T ss_pred CHHHHHHHHHH--cCCEEEEEchhhcCCccccccccCCCEEEeehhhcC-CCCceEEEEEccCcccccc---cCceeeCC
Confidence 99999999999 999999999999999999988889999999999986 7999999999988543211 11111110
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcC
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
. ...+ +.++|+++..++++.++++.+. .+++++.++++++++++++.|++.|+++..+.. .....++.|.+
T Consensus 230 ~-~~~~-----~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~-~~~~~i~~~~~- 300 (353)
T TIGR03235 230 G-QERG-----LRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPA-ETIPHILNFSI- 300 (353)
T ss_pred C-CcCc-----cccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcc-cccCCEEEEEe-
Confidence 0 0012 2355688999999999999876 478899999999999999999888988876432 24556777877
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCC
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNK 340 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~ 340 (367)
++.+.+++.+.|. + +|.+.+|..+
T Consensus 301 ~~~~~~~v~~~L~-~-~i~v~~g~~~ 324 (353)
T TIGR03235 301 DGVNSEALIVNLR-A-DAAVSTGSAC 324 (353)
T ss_pred CCcCHHHHHHHHh-C-CeEEEchhhc
Confidence 4678889999994 5 8999988654
No 33
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-33 Score=249.71 Aligned_cols=331 Identities=16% Similarity=0.163 Sum_probs=260.3
Q ss_pred CCcccccCCCCCChHHHHHHHccC-----C-------CCCCCCcHHHHHHHHHHHHHHHhcCCCCceE-EecCChhHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRN-----N-------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPF-LIPTTGTGAWE 74 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~-----~-------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v-~~~~ggt~al~ 74 (367)
.|.|+|+|||..+|++|++++.+. . .+|+++.+.+...++++.+++++++++.+.| ++.+|||.++.
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e 82 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence 358899999999999999999952 2 4588999999999999999999999765555 55556899999
Q ss_pred HHHHccCCCCCeEE-EEeCCcchHHHHHHHHHhCCceEEEeCCC----CCCCCHHHHHHHHhccCCCCccEEEEEecCCC
Q 017726 75 SALTNTLSPGDRII-SFLIGQFSLLWIDQQQRLNFNVDVVESDW----GEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (367)
Q Consensus 75 ~~~~~~~~~gd~vl-~~~~~~~~~~~~~~~~~~g~~~~~v~~~~----~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~ 149 (367)
++..+++.+|++++ +...++|+.+|.+.++..| ++..+.... ...++++++ .+. +..+.|.+|+..+.
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~----~d~~~v~~t~NETs 155 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWD----ARAPFRHYVSNETV 155 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccC----CCCcEEEEccCCCC
Confidence 99999999999777 8889999999888898888 666554321 123455554 122 35689999999999
Q ss_pred ccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 150 tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
+|+..| ++.+. +++++++|+++++++.+++++++ |+++.+.+|.++ |+|+++++++++.+++.... ..
T Consensus 156 tGv~~~-----~~~~~--~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlg-P~Gltvvivs~~al~~~~~~--~p 223 (364)
T PRK12462 156 EGLQFP-----DAAGL--PDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLG-PAGVTVAIIRRALLERVPDT--LP 223 (364)
T ss_pred ceEecC-----ccccc--CCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCC-CCceEEEEECHHHHhhcccc--CC
Confidence 999997 44445 68999999999999999999965 999999999995 99999999999999887642 23
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCC
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSD 306 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 306 (367)
.+++|.....+ + ..++||++..+.++..+++++.++ |++.+.++.++.++.+++.++++ |+.....++..++.
T Consensus 224 ~~ldy~~~~~~---~-s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 224 PMLDFRTHVEH---R-SNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred chhhHHHHHhc---C-CCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 45555555442 2 246799999999999999999888 89999999999999999999998 57666666777888
Q ss_pred ceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhh
Q 017726 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLL 364 (367)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l 364 (367)
..+.|++++..-.++|.+... +.|+.-..|.... +.+|+|.++..+.+ +.+.+++
T Consensus 300 mnv~f~~~~~~l~~~f~~~a~-~~gl~~lkGhr~v--gg~Ras~yna~~~e~v~~L~~fm 356 (364)
T PRK12462 300 MNVAFRFRQPRLDTLFKEQST-EAGFCGLSGHRSI--GGIRASLYNAVSEQAVSRLCAFL 356 (364)
T ss_pred ceEEEEcCCHHHHHHHHHHHH-HCCCccccCCccc--CceEEEcCCCCCHHHHHHHHHHH
Confidence 889999865444567777775 4487765554332 34999999866544 4444433
No 34
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=4.9e-34 Score=263.62 Aligned_cols=340 Identities=16% Similarity=0.114 Sum_probs=245.3
Q ss_pred CCCcccccCCCCCChHHHHHHHccCCCC-----CCC-----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 7 PGKNHLFVPGPVHIPDQVIRAMNRNNED-----YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~-----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
+..+|++..+-.++|+.+.+++.++... ..+ ..+....+++++ + +++|++++ +|++++|+|++++.+
T Consensus 26 ~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-~v~~~~~~t~~l~~~ 102 (406)
T TIGR01814 26 NAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-EVVVMNTLTINLHLL 102 (406)
T ss_pred CCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-cEEEeCCchHHHHHH
Confidence 3457777566667789999988764221 111 123344444444 5 79998764 599999999999999
Q ss_pred HHccCCCCC---eEEEEeCCcchHH--HHHHHHHhCCce----EEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecC
Q 017726 77 LTNTLSPGD---RIISFLIGQFSLL--WIDQQQRLNFNV----DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (367)
Q Consensus 77 ~~~~~~~gd---~vl~~~~~~~~~~--~~~~~~~~g~~~----~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~ 147 (367)
+.+++.+++ .|++.+.+|.+.. +...++..|+++ +.++.+.++.+|++++++.++..+ +++++|++++++
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~~t~lv~~~~v~ 181 (406)
T TIGR01814 103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNG-DDIAVILLSGVQ 181 (406)
T ss_pred HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcC-CCeEEEEEeccc
Confidence 888766542 5777777887754 444567778887 466666567789999999886443 578999999999
Q ss_pred CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCC
Q 017726 148 TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (367)
Q Consensus 148 n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~ 227 (367)
|.||.+.|+++|.++|++ +|+++++|++|++|..++++..+++|++++|+|||+.||+| |.++++++....+.+...
T Consensus 182 ~~tG~~~~~~~i~~~~~~--~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~ 258 (406)
T TIGR01814 182 YYTGQLFDMAAITRAAHA--KGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRLA 258 (406)
T ss_pred cccceecCHHHHHHHHHH--cCCEEEEEcccccCCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCCC
Confidence 999999999999999999 99999999999999999999888999999999999987888 767766655444444322
Q ss_pred Cceeec----hHH-HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-C----Cccc
Q 017726 228 VRVFFD----WKD-YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G----LKNC 297 (367)
Q Consensus 228 ~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g----~~~~ 297 (367)
..+... +.. .........+..+|+++..++++.++++++.+.|++++.++..++.+++++.|++. | ++++
T Consensus 259 g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~ 338 (406)
T TIGR01814 259 GWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTII 338 (406)
T ss_pred cccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEe
Confidence 111100 000 00000011223457999999999999999999999999999999999999999885 3 7777
Q ss_pred cCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee-cCCCCHHHHH
Q 017726 298 TQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH-LGHLNEVMFN 360 (367)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~-~~~~~~~~~~ 360 (367)
.+.+......++.|.++ .+..++.+.|.++ ||.+... .+..+|+|+ +.+++.+|++
T Consensus 339 ~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~-gi~v~~~----~~~~iRiS~~~~~nt~~did 395 (406)
T TIGR01814 339 TPRDHAQRGCQLSLTHP--VPGKAVFQALIKR-GVIGDKR----EPSVIRVAPVPLYNTFVDVY 395 (406)
T ss_pred CCCChhhcCCeEEEEec--CCHHHHHHHHHHC-CEEEecc----CCCeEEEechhccCCHHHHH
Confidence 75332222446778875 5678899999654 9987532 235899998 4566655443
No 35
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=2.4e-33 Score=276.68 Aligned_cols=324 Identities=12% Similarity=0.069 Sum_probs=243.1
Q ss_pred CcccccCCCCCChH-HHHHHHccCC-----CCCCC----CcHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHH
Q 017726 9 KNHLFVPGPVHIPD-QVIRAMNRNN-----EDYRS----PAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESAL 77 (367)
Q Consensus 9 ~~~~~~~~p~~~~~-~v~~a~~~~~-----~~~~~----~~~~~~~~~~~~~la~~~~~~~~~-~v~~~~ggt~al~~~~ 77 (367)
.+|++.++.+++++ .+.+++.++. +.+.. ....+.++++|+.+++++|+++++ .|+||+|+|+|+++++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva 114 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG 114 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence 58999998887665 4444444331 12321 124567899999999999997655 6899999999999998
Q ss_pred Hcc-CCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCC--------CCCCCCH--HHHHHHHhc------cCCCCcc
Q 017726 78 TNT-LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESD--------WGEGAKL--DVLASKLAA------DTAHTIK 139 (367)
Q Consensus 78 ~~~-~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~--------~~~~~d~--e~l~~~i~~------~~~~~~~ 139 (367)
.++ +.+||+|+++..+|.+.. |...++..|+++..++.+ ..+.+++ +++++.+++ ...++++
T Consensus 115 ~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~ 194 (805)
T PLN02724 115 ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN 194 (805)
T ss_pred HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence 876 688999999888887765 556677789999999876 2333433 567665421 0114678
Q ss_pred EEEEEecCCCccccccHHHHHHHHHhc-CC-----CcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeee
Q 017726 140 AICIVHNETATGVTNNLSKVRKLLDEY-RH-----PALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVC 213 (367)
Q Consensus 140 lv~~~~~~n~tG~~~~~~~i~~~~~~~-~~-----~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~ 213 (367)
+|.+++.+|.||.+.|++.+..+++.. .+ ++++++|++|+++..++|+..+++|++++|+|||++||.|+|+++
T Consensus 195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G~G~L~ 274 (805)
T PLN02724 195 LFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTGLGALL 274 (805)
T ss_pred eEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceeccCCCCceEEE
Confidence 999999999999999999775555431 11 367999999999999999999999999999999997799999999
Q ss_pred eCHHHHHHhccCCCCceee-----------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Q 017726 214 ASPKALEASKTAKSVRVFF-----------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLG 282 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~ 282 (367)
++++..+++.+...++... .......+++.|+ +++.+++++.++++++.+.|++++.++..+++
T Consensus 275 vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT-----~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~ 349 (805)
T PLN02724 275 VRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGT-----ISFLSIAALRHGFKLLNRLTISAIAMHTWALT 349 (805)
T ss_pred EehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCC-----cchhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 9999888777654332110 1112346777775 99999999999999999999999999999999
Q ss_pred HHHHHHHHHc-------CCccccCCC----ccCCCceEEEEcCCCCC-----HHHHHHHHHhhCCeEEccCCC
Q 017726 283 KATRLAVEAW-------GLKNCTQKE----EWFSDTVTAVIVPSHIN-----SSEIVRRAWQRYNLSLGLGLN 339 (367)
Q Consensus 283 ~~l~~~L~~~-------g~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~gv~v~~g~~ 339 (367)
+++.+.|+++ ++.++.+.. ......++.|.+ .+.+ ..+ ...|.+++||.++.|..
T Consensus 350 ~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv-~~~~~~~v~~~~-v~~l~~~~gI~vR~G~~ 420 (805)
T PLN02724 350 HYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNL-KRADGSWVGHRE-VEKLASLSGIQLRTGCF 420 (805)
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEE-EcCCCCEeCHHH-HHHHHHhcCcEEeeccc
Confidence 9999999986 366776531 123445888888 4433 333 44565678999998865
No 36
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.1e-32 Score=254.55 Aligned_cols=325 Identities=14% Similarity=0.124 Sum_probs=241.8
Q ss_pred CcccccCCCCCChHHHHHHHccCCC--C-----CC-CCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNE--D-----YR-SPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~--~-----~~-~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
++|++.++++++|+.+++++.++.. . +. ... .....+++|+.+++++|+++. ++++++|+|+++.++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHH
Confidence 6899999999999999999977543 1 11 111 135678899999999999764 489999999999988
Q ss_pred HHcc----CCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 77 LTNT----LSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 77 ~~~~----~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
+.++ ..+||.|+++..+|++.. ....++..|++++.++.+.++.+|+++++++++ +++++|++++++|+||
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~----~~t~lv~~~~~~n~tG 158 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR----DDTILVSIMHVNNEIG 158 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC----CCCEEEEEECcCCCcc
Confidence 7654 478999999999887764 223345569999999998888899999999997 4679999999999999
Q ss_pred ccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
.+.|+++|.++|++ +|+++++|++++.+..++++...++|++++|+||.+ ||.|+|+++++++...++.+......
T Consensus 159 ~~~~~~~I~~la~~--~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~~~~~~~~g~~- 234 (404)
T PRK14012 159 VIQDIAAIGEICRE--RGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKPRVRLEAQMHGGG- 234 (404)
T ss_pred chhhHHHHHHHHHH--cCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc-CCCceEEEEEecCCCCCCCceecCCC-
Confidence 99999999999999 999999999999999888888788999999999966 68889999998775433322111100
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCC--ce
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSD--TV 308 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~--~~ 308 (367)
...+++ .++++...+.++.++++.... +.+++.++..++++++.+.|++. ++.+..+... ... ..
T Consensus 235 -----~~~~~~-----~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~-~~~~~~~ 302 (404)
T PRK14012 235 -----HERGMR-----SGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQ-RVPGNLN 302 (404)
T ss_pred -----ccCCcc-----CCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc-cCCCEEE
Confidence 001122 335778788888888888765 36778899999999999999886 6665433111 222 23
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-------------------CCCcEEEEeecCCCCHHHHH
Q 017726 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-------------------VAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~-------------------~~~~~iRi~~~~~~~~~~~~ 360 (367)
++|... +.+++.+.|. ++.+..|... ...+.+|++++.+.+++|++
T Consensus 303 ~~~~~~---~~~~~~~~l~---~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd 367 (404)
T PRK14012 303 VSFNYV---EGESLIMALK---DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID 367 (404)
T ss_pred EEEeCc---CHHHHHHhCC---CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence 444442 3457777763 5555554221 12356999998877765543
No 37
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-32 Score=249.53 Aligned_cols=322 Identities=12% Similarity=0.042 Sum_probs=226.7
Q ss_pred cccccCCCC--CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhc------CCCCceEEecCChhHHHHHHHHc
Q 017726 10 NHLFVPGPV--HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK------TTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 10 ~~~~~~~p~--~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
.+.+..|.. ++++.+.+++.+.... ..+|. .....++|+.++++++ ++++++|++|+|+++++..++.+
T Consensus 34 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~ 112 (399)
T PRK07681 34 MIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMV 112 (399)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHH
Confidence 344444332 3567777777764322 12221 2456678888888875 23325699999999999999999
Q ss_pred cCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc--
Q 017726 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-- 155 (367)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~-- 155 (367)
++++||.|+++.|.|+.+. ..++..|++++.++++++ +.+|++++++++. +++|+|++++||||||.+++
T Consensus 113 ~~~~Gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~v~l~~P~NPTG~~~s~~ 186 (399)
T PRK07681 113 YANPGDIILVPDPGYTAYE--TGIQMAGATSYYMPLKKENDFLPDLELIPEEIA----DKAKMMILNFPGNPVPAMAHED 186 (399)
T ss_pred hCCCCCEEEECCCCccchH--HHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc----ccceEEEEeCCCCCcCcCCCHH
Confidence 9999999999999877653 556789999999998754 4679999998886 46799999999999999998
Q ss_pred -HHHHHHHHHhcCCCcEEEEeeeeccCcee----ec---cc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhcc
Q 017726 156 -LSKVRKLLDEYRHPALFLVDGVSSICAID----FR---MD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKT 224 (367)
Q Consensus 156 -~~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~~---~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~ 224 (367)
+++|.++|++ +|++||+|++|...... .+ .. .....+++.|+||.++ .+| +|+++.++++++++..
T Consensus 187 ~~~~i~~~a~~--~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlRiG~~i~~~~l~~~~~~ 263 (399)
T PRK07681 187 FFKEVIAFAKK--HNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYS-LAGSRIGYMIGNEEIVRALTQ 263 (399)
T ss_pred HHHHHHHHHHH--cCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccC-CccceeEEEecCHHHHHHHHH
Confidence 6667888888 99999999998744321 11 11 1134688899999984 455 7999999999887764
Q ss_pred CCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 017726 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (367)
... . ..++.+.....++..++..-.. -+++.++.++++++.+.+.|++.|+.+..+ .
T Consensus 264 ~~~----------------~--~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p----~ 320 (399)
T PRK07681 264 FKS----------------N--TDYGVFLPIQKAACAALRNGAA-FCEKNRGIYQERRDTLVDGFRTFGWNVDKP----A 320 (399)
T ss_pred HHh----------------h--cccCCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccCC----C
Confidence 311 0 1223444333333333332111 156677788899999999999988776555 4
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
++.++|++++++.+..++.+.|.+++||.+.+|... ..++++||++....+..+...+.|
T Consensus 321 ~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l 382 (399)
T PRK07681 321 GSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENI 382 (399)
T ss_pred eeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHH
Confidence 567888998777788899999988689999998432 234689999764333333333333
No 38
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=1.2e-31 Score=245.77 Aligned_cols=323 Identities=13% Similarity=0.129 Sum_probs=235.1
Q ss_pred CCChHHHHHHHccCCCCCCC---------CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEE
Q 017726 18 VHIPDQVIRAMNRNNEDYRS---------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl 88 (367)
.++++++++++.++...... ........++++.+++++|.++ +++++|+++++..++.+++.+||+|+
T Consensus 30 ~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~---~~~~~g~t~a~~~al~~l~~~gd~Vl 106 (387)
T PRK09331 30 GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE---ARVTHGAREGKFAVMHSLCKKGDYVV 106 (387)
T ss_pred CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHhcCCCCEEE
Confidence 46788899999886533211 1123468899999999999864 67899999999999999999999999
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhccC---CCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~e~l~~~i~~~~---~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
+..++|++... .++..|++++.++. +.++.+|+++++++++++. .+++++|++++++|++|.+.|+++|.++|
T Consensus 107 v~~~~h~s~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la 184 (387)
T PRK09331 107 LDGLAHYTSYV--AAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVA 184 (387)
T ss_pred ECCCchHHHHH--HHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHH
Confidence 99998888653 36778999999998 5677899999999997531 13689999999999999999999999999
Q ss_pred HhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 164 DEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
++ +|+++++|++|+.+..+++...+++|++++|+||+++++.|+|+++++++.++.+..... .+... ....+
T Consensus 185 ~~--~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~-~~~~~---~~~~~-- 256 (387)
T PRK09331 185 HE--YGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSR-KFGVK---EVELL-- 256 (387)
T ss_pred HH--cCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccC-CCccc---ceeee--
Confidence 99 999999999999998888888888999999999999888889999999998887654321 11000 00000
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-------
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS------- 315 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------- 315 (367)
++ +.+....+++.++++.+.+. + +..++..++++++++.|+++ |+++....+ ....++.+..|.
T Consensus 257 ~~----~~~~~~~~~~~aal~~~~~~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~--~~~~i~~~~~~~~~~~~~~ 328 (387)
T PRK09331 257 GC----TLRGAPLVTLMASFPHVVER-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKP--RNHDLMKFETPSFDEIAKK 328 (387)
T ss_pred ce----ecCchHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCc--CcCCeEEEeCCchhHHhhh
Confidence 11 12222234455566555443 2 34556678888999999999 998885322 234466666541
Q ss_pred -CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 316 -HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 316 -~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
..+..++.+.|.+ +||... .+..+..+|++..+ +.++.+....+|+
T Consensus 329 ~~~~~~~~~~~L~~-~gI~~~---~~~~~~i~ri~~~g~t~~di~~l~~aL~ 376 (387)
T PRK09331 329 HKRRGFFLYEELKK-RGIHGI---KPGATKEFKLSTYGLTWEQVEYVADAFK 376 (387)
T ss_pred ccccchhHHHHHHH-cCceEE---ccCCceEEEEEeccCCHHHHHHHHHHHH
Confidence 1123568899965 499732 22335678998767 3344455555554
No 39
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-31 Score=246.48 Aligned_cols=301 Identities=15% Similarity=0.068 Sum_probs=215.5
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
++++.+.+++.+.... ...|.......++|+.+++++ |. ++++.|++|+|+++++..++.+++++||.|+++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~ 123 (385)
T PRK09276 44 PTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVP 123 (385)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEc
Confidence 4566777777664321 122332334567888888877 44 333348889999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~ 165 (367)
+|.|+.+. ..++..|.+++.++.+.+ +.+|++++++++. +++++|++++|+||||.+++. ++|.++|++
T Consensus 124 ~P~y~~~~--~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~ 197 (385)
T PRK09276 124 DPGYPVYK--IGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA----KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKK 197 (385)
T ss_pred CCCCcChH--HHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc----ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99877643 456778999999998643 5679999988876 467999999999999999985 677888888
Q ss_pred cCCCcEEEEeeeeccCcee----ec---ccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechH
Q 017726 166 YRHPALFLVDGVSSICAID----FR---MDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~---~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+|++||+|++|...... .+ ... .+..+++.|+||.+ |.+| +|++++++++++.+......
T Consensus 198 --~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~~~l~~~~~~~~~~------- 267 (385)
T PRK09276 198 --YDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGNADLIAGLGKVKSN------- 267 (385)
T ss_pred --CCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhc-CCcchhheeeeCCHHHHHHHHHHHhh-------
Confidence 99999999998743211 11 111 23568899999988 4666 79999999998877642110
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
. ....+.....++..++..... -+++.++++.++++.+.+.|++.|+++..+ .++.++++++++
T Consensus 268 -------~----~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~~~~~v~~~~ 331 (385)
T PRK09276 268 -------V----DSGVFQAIQEAGIAALNGPQE-VVEELRKIYQERRDILVEGLRKLGLEVEPP----KATFYVWAPVPK 331 (385)
T ss_pred -------c----cCCCCHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CcceEEEEECCC
Confidence 0 111222222333333332111 267778888999999999999988877665 456668898877
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeec
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHL 351 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~ 351 (367)
+.+..+++++|.+++||.+.+|..+. .++++||++.
T Consensus 332 ~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~ 369 (385)
T PRK09276 332 GYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT 369 (385)
T ss_pred CCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC
Confidence 77888999998877799999984432 2468999975
No 40
>PRK07324 transaminase; Validated
Probab=100.00 E-value=7.1e-32 Score=246.14 Aligned_cols=297 Identities=17% Similarity=0.108 Sum_probs=213.6
Q ss_pred HHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHH
Q 017726 22 DQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWID 101 (367)
Q Consensus 22 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~ 101 (367)
++..+++.+. ...|.......++|+.++++++.-++++|++|+|+++++.+++.+++.+||+|+++.|.|.+. ..
T Consensus 45 ~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~--~~ 119 (373)
T PRK07324 45 EAFYQELGQK---KLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQL--YD 119 (373)
T ss_pred HHHHHHHhcC---CccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhH--HH
Confidence 4445555432 223333345679999999998633334699999999999999999999999999999976654 35
Q ss_pred HHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEee
Q 017726 102 QQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 102 ~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~ 176 (367)
.++..|.+++.++++.+ +.+|++++++++. +++|++++++|+||||.+++ +++|.++|++ +|+++++|+
T Consensus 120 ~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~----~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~--~~~~ii~De 193 (373)
T PRK07324 120 IPESLGAEVDYWQLKEENGWLPDLDELRRLVR----PNTKLICINNANNPTGALMDRAYLEEIVEIARS--VDAYVLSDE 193 (373)
T ss_pred HHHHcCCEEEEEecccccCCCCCHHHHHHhCC----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHH--CCCEEEEEc
Confidence 67889999999998753 4579999998886 47799999999999999998 7788888998 999999999
Q ss_pred eeccCceee---cc-ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 177 VSSICAIDF---RM-DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 177 ~~~~~~~~~---~~-~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+|....... +. ......+++.|+||.++ .+| +|++++++++++++....... ..+
T Consensus 194 ~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~-~~G~RiG~i~~~~~li~~~~~~~~~~------------------~~~ 254 (373)
T PRK07324 194 VYRPLDEDGSTPSIADLYEKGISTNSMSKTYS-LPGIRVGWIAANEEVIDILRKYRDYT------------------MIC 254 (373)
T ss_pred cccccccCCCCCChhhccCCEEEEecchhhcC-CccceeEEEecCHHHHHHHHHHhCcE------------------Eec
Confidence 986432211 11 11134588899999985 444 699999999988877542210 112
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
.+.....+...++...... +++.++.++++++.+.+.|++. ++.+..| .++.+.+++++.+.+..+++++|.++
T Consensus 255 ~~~~~q~~a~~~l~~~~~~-l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p----~gg~~~~i~~~~~~~~~~~~~~ll~~ 329 (373)
T PRK07324 255 AGVFDDMLASLALEHRDAI-LERNRKIVRTNLAILDEWVAKEPRVSYVKP----KAVSTSFVKLDVDMPSEDFCLKLLKE 329 (373)
T ss_pred CChHHHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHhcCCCceEECC----CceEEEEEEeCCCCCHHHHHHHHHHh
Confidence 3332222333344322222 5667777888889999999887 6666665 34445667775456788999998877
Q ss_pred CCeEEccCCCCCCCcEEEEeecCC
Q 017726 330 YNLSLGLGLNKVAGKVFRIGHLGH 353 (367)
Q Consensus 330 ~gv~v~~g~~~~~~~~iRi~~~~~ 353 (367)
+||.+.||..+..++++|||+...
T Consensus 330 ~gv~v~pg~~F~~~~~iRis~~~~ 353 (373)
T PRK07324 330 TGVLLVPGNRFDLEGHVRIGYCCD 353 (373)
T ss_pred cCEEEECccccCCCCeEEEEecCC
Confidence 899999996655567899997543
No 41
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=2e-31 Score=242.83 Aligned_cols=326 Identities=13% Similarity=0.140 Sum_probs=237.6
Q ss_pred CCCCChHHHHHHHccCCCCCCCC---------cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSP---------AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~---------~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
.+.++.+.+++++.++.....++ .......++++.+++++|. +++++++|+++++..++.+++.+||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~i~~~~g~t~al~~~l~~~~~~gd~ 85 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM---DEARVTPGAREGKFAVMHSLCEKGDW 85 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC---ceEEEeCCHHHHHHHHHHHhcCCCCE
Confidence 56678999999999987432211 1234578999999999998 24899999999999999999999999
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeCCCCC--CCCHHHHHHHHhccC---CCCccEEEEEecCCCccccccHHHHHH
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNNLSKVRK 161 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~e~l~~~i~~~~---~~~~~lv~~~~~~n~tG~~~~~~~i~~ 161 (367)
|+++.++|++.. ..++..|++++.++.+.++ .+|++++++++++.. .+++++|++++|+||+|.+.|+++|.+
T Consensus 86 Vl~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~ 163 (361)
T cd06452 86 VVVDGLAHYTSY--VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAK 163 (361)
T ss_pred EEEcCCcchHHH--HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHH
Confidence 999999888865 3477889999999987654 889999999987421 026799999999999999999999999
Q ss_pred HHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 162 LLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 162 ~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+|++ +|+++++|++|+.+..+++....++|++++|+||+++++.++|++++++++++++.....+ ++... ...
T Consensus 164 ~~~~--~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~---~~~~~--~~~ 236 (361)
T cd06452 164 VCHE--YGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQM---FKIKE--VEL 236 (361)
T ss_pred HHHH--cCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccc---cccce--eee
Confidence 9999 9999999999998887777777789999999999998777899999999998887654321 11000 000
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-----
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS----- 315 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~----- 315 (367)
.+ .++....+.++.++++.+.+. ++. .++..++++++++.|+++ |++++.+.+ ...+++.++.+.
T Consensus 237 -~~----~~~~~~~~~~~~~al~~~~~~-~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~--~~~n~~~~~~~~~~~~~ 307 (361)
T cd06452 237 -LG----CTLRGAPLVTLMASFPHVKER-VKR-WDEEVEKARWFVAELEKIEGIKQLGEKP--KNHDLMFFETPSFDEIA 307 (361)
T ss_pred -ec----cccCchHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHhcCCCeEEECCCC--CCCceEEEEcCCcchhh
Confidence 01 123333334555566554332 333 334455678999999998 988875322 233456666541
Q ss_pred ---CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhhc
Q 017726 316 ---HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLFQ 366 (367)
Q Consensus 316 ---~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~~ 366 (367)
.....++.++|+++ ||.+. .+..+.++|++..+ ..++.+.+.++|++
T Consensus 308 ~~~~~~~~~~~~~L~~~-gI~~~---~~~~~~~~ri~~~g~~~e~~~~l~~al~~ 358 (361)
T cd06452 308 KKHKRRGYFLYSELKKR-GIHGI---KPGLTRYFKLSTYGLTWEQVEYVVDAFKE 358 (361)
T ss_pred hhccccchhHHHHHHHc-CceEE---cCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 11233699999765 99842 22334589999866 55666777777654
No 42
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-31 Score=238.35 Aligned_cols=311 Identities=18% Similarity=0.151 Sum_probs=242.1
Q ss_pred CCCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCc
Q 017726 16 GPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~ 94 (367)
.|.++|+.+.+++.+.... +++|+. ...++++.++++++..+++.|++++|+++.+..++++++.+||+|+++.|.|
T Consensus 32 nP~gp~~~~~~~~~~~~~~~~rYPd~--~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf 109 (356)
T COG0079 32 NPYGPPPKVIEAIRAALDKLNRYPDP--DYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTF 109 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhhccCCCC--cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCCh
Confidence 6777788888888876543 566664 5779999999999944334588899999999999999999999999999965
Q ss_pred chHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
..+ ...++..|++++.++..+ +.+|++.+.+.+.+ ++++|++|+||||||...+.++|.+++...+.+.+|++
T Consensus 110 ~~Y--~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~----~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVv 182 (356)
T COG0079 110 SMY--EIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRD----KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVI 182 (356)
T ss_pred HHH--HHHHHhcCCeEEEecccc-cccCHHHHHHhhhc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 543 355788999999999988 88999999999984 57999999999999999999999999998434899999
Q ss_pred eeeeccCceee--ccc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 175 DGVSSICAIDF--RMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 175 D~~~~~~~~~~--~~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
||+|.-++.+. ... ..+.-+++-|+||.+ |..| +||++.++++++.+...+. +|
T Consensus 183 DEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~-gLAGlRlGy~ia~~~~i~~l~~vr~--------------------p~ 241 (356)
T COG0079 183 DEAYIEFSPESSLELLKYPPNLIVLRTFSKAF-GLAGLRVGYAIANPELIAALNKVRP--------------------PF 241 (356)
T ss_pred eCchhhcCCchhhhhccCCCCEEEEEecHHhh-hcchhceeeccCCHHHHHHHHHhcC--------------------CC
Confidence 99987554321 111 223358888999988 4666 5999999999999986532 66
Q ss_pred CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCc-cccCCCccCCCceEEEEcCCCCCHHHHHHHHHh
Q 017726 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (367)
+.+.....+..++++.- + -+++..++..+.++++.+.|+++|+. +.++ . .+++.+++++.. ..++.+.|.+
T Consensus 242 ~v~~~a~~aa~aal~~~-~-~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS----~-aNFvlv~~~~~~-~~~l~~~L~~ 313 (356)
T COG0079 242 NVSSPALAAAIAALRDA-D-YLEESVERIREERERLYAALKALGLFGVFPS----Q-ANFVLVRVPDAE-AAALAEALLK 313 (356)
T ss_pred CCCHHHHHHHHHHcccH-H-HHHHHHHHHHHHHHHHHHHHHhCCCCeecCC----C-CcEEEEECCCcc-HHHHHHHHHH
Confidence 77776555555555544 2 26788899999999999999999844 5554 3 447778886533 6689999976
Q ss_pred hCCeEEccCCC-CCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 329 RYNLSLGLGLN-KVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 329 ~~gv~v~~g~~-~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+ ||.++.... +..++++||+ .++.++.+.+.++|.+
T Consensus 314 ~-giivR~~~~~~~~~~~lRit-vgt~een~~ll~AL~~ 350 (356)
T COG0079 314 K-GILVRDCSSVGLLPGYLRIT-VGTPEENDRLLAALRE 350 (356)
T ss_pred C-CEEEEeCCCCCCCCCeEEEE-eCCHHHHHHHHHHHHH
Confidence 6 999997644 4456789998 5666666888877764
No 43
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-31 Score=243.20 Aligned_cols=309 Identities=16% Similarity=0.094 Sum_probs=228.2
Q ss_pred CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcch
Q 017726 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~ 96 (367)
|.++++.+.+++.+....+.++. ....++|+.+++++|++++ +|++++|+++++..++.+++.+||+|++++|.|..
T Consensus 63 p~~~~~~v~~a~~~~~~~~~Yp~--~~~~~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~ 139 (380)
T PLN03026 63 PYGPPPEVLEALGNMKFPYVYPD--PESRRLRAALAEDSGLESE-NILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGM 139 (380)
T ss_pred CCCCCHHHHHHHHhhHhhccCCC--CCHHHHHHHHHHHhCcChh-hEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHH
Confidence 56777888998875322122333 2357899999999998764 59999999999999998888999999999997653
Q ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+ ...++..|++++.++.+.++.+|++++++++.. +++++|++++|+||||.++|.+++.++++. . ++|++|+
T Consensus 140 y--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~--~-~~vi~De 211 (380)
T PLN03026 140 Y--VFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET---HKPKLLFLTSPNNPDGSIISDDDLLKILEL--P-ILVVLDE 211 (380)
T ss_pred H--HHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc---cCCcEEEEeCCCCCCCCCCCHHHHHHHHhc--C-CEEEEEC
Confidence 3 355677899999999877788999999999832 478999999999999999999999999986 4 8999999
Q ss_pred eeccCcee---e-ccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 177 VSSICAID---F-RMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 177 ~~~~~~~~---~-~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+|...... . ........+++.|++|.++ .+| +|++++++++++.+..... ++.
T Consensus 212 aY~~~~~~~~~~~~~~~~~~viv~~SfSK~~g-laGlRiGy~~~~~~~i~~l~~~~~--------------------~~~ 270 (380)
T PLN03026 212 AYIEFSTQESRMKWVKKYDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQ--------------------PYN 270 (380)
T ss_pred cchhhcCCcchHHHHHhCCCEEEEecchHhhc-CccccceeeecCHHHHHHHHHhcC--------------------CCC
Confidence 98643211 1 1122345789999999984 555 6999999999887764321 223
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
.+.....+..+++.. .+. +++.++.+.++++++.+.|++++ +.+.+ ..+++++++++++.+..++.+.|. +
T Consensus 271 ~~~~~q~aa~~aL~~-~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-----~~~~f~~~~~~~~~~~~~~~~~l~-~ 342 (380)
T PLN03026 271 VSVAAEVAACAALSN-PKY-LEDVKNALVEERERLFGLLKEVPFLEPYP-----SDANFILCRVTSGRDAKKLKEDLA-K 342 (380)
T ss_pred CCHHHHHHHHHHhhC-HHH-HHHHHHHHHHHHHHHHHHHHHCCCCeECC-----CCCeEEEEECCCCCCHHHHHHHHH-H
Confidence 444433444444432 111 66778888999999999999985 44433 245577888865667889999997 5
Q ss_pred CCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 330 YNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 330 ~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+||.++++..+..++++||++ +..++.+.+.++|++
T Consensus 343 ~gI~v~~~~~~~~~~~lRis~-~~~~~~~~l~~al~~ 378 (380)
T PLN03026 343 MGVMVRHYNSKELKGYIRVSV-GKPEHTDALMEALKQ 378 (380)
T ss_pred CCeEEEECCCCCCCCEEEEec-CCHHHHHHHHHHHHH
Confidence 599999875443456899995 455556777777664
No 44
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-31 Score=246.45 Aligned_cols=304 Identities=14% Similarity=0.152 Sum_probs=214.0
Q ss_pred CCCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHH----HHHhcCC-CC-ceEEecCChhHHHHHHHHccCCCCCeE
Q 017726 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDI----KKIFKTT-SG-TPFLIPTTGTGAWESALTNTLSPGDRI 87 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l----a~~~~~~-~~-~~v~~~~ggt~al~~~~~~~~~~gd~v 87 (367)
.|.++++.+.+++.+.... ..+|.......++|+.+ ++.+|.+ .+ ++|++|+|+++++..++.+++.+||.|
T Consensus 50 ~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~V 129 (405)
T PRK06207 50 DAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKV 129 (405)
T ss_pred CCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEE
Confidence 3344666777777664322 12232223334455555 4445754 33 569999999999999999999999999
Q ss_pred EEEeCCcchHHHHHHHHHhCCceEEEeCC-----CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHH
Q 017726 88 ISFLIGQFSLLWIDQQQRLNFNVDVVESD-----WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKV 159 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i 159 (367)
++.+|.|+.+. ..++..|.+++.++.+ .++.+|++++++++++ ++++|++++||||||.+++ +++|
T Consensus 130 lv~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~----~~k~v~l~~P~NPTG~~~s~e~l~~l 203 (405)
T PRK06207 130 AIVQPDYFANR--KLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA----GVRVFLFSNPNNPAGVVYSAEEIAQI 203 (405)
T ss_pred EEeCCCchhHH--HHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh----cCeEEEECCCCCCCCcCCCHHHHHHH
Confidence 99999887643 5678889999999875 2467899999999874 5699999999999999997 6668
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee----eccc----cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCc
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID----FRMD----EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~----~~~~----~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 229 (367)
.++|++ +|++||+|++|...... .... .....+++.|+||.++ .+| +|+++.++++++++......
T Consensus 204 ~~~a~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-lpGlRiG~ii~~~~l~~~~~~~~~~- 279 (405)
T PRK06207 204 AALARR--YGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTES-LSGYRLGVAFGSPAIIDRMEKLQAI- 279 (405)
T ss_pred HHHHHH--cCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhcc-CcccceEEEEcCHHHHHHHHHHHhH-
Confidence 888888 99999999998754221 1111 1234589999999995 445 79999999998877643110
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCc
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDT 307 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 307 (367)
. ....+.....++..++.. ..+ +++.+++++++++.+.+.|+++ ++.+..+ .+++
T Consensus 280 --------------~---~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~gg~ 336 (405)
T PRK06207 280 --------------V---SLRAAGYSQAVLRTWFSE--PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAP----QAGS 336 (405)
T ss_pred --------------h---ccCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CeeE
Confidence 0 111222222333333321 112 5667778888899999999887 7776665 4567
Q ss_pred eEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 308 VTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 308 ~~~~~~~~-~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
++|++++. +.+..++++.|.+++||.+.+|..+ ..++++||++..
T Consensus 337 fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~ 384 (405)
T PRK06207 337 YLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ 384 (405)
T ss_pred EEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC
Confidence 88899864 3577899999987779999998543 335789999765
No 45
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2e-31 Score=244.85 Aligned_cols=301 Identities=14% Similarity=0.081 Sum_probs=215.8
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~----~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
+.++.+.+++.+.... ...|.......++|+.++++++ .+ +++.|++|+|+++++..++.+++++||.|+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~ 121 (383)
T TIGR03540 42 PTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVP 121 (383)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEe
Confidence 3466777777653221 1223333345678888887764 42 33358899999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
+|.|+.+. ..++..|++++.++.+.+ +.+|++++++++. +++++|++++||||||.+++ +++|.++|++
T Consensus 122 ~P~y~~~~--~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~----~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~ 195 (383)
T TIGR03540 122 DPGYPVYR--IGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA----KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKE 195 (383)
T ss_pred CCCCcchH--HHHHhcCCEEEEEecCcccCCccCHHHHHhhcc----ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHH
Confidence 99877654 457789999999998643 4579999998886 46799999999999999998 5778888998
Q ss_pred cCCCcEEEEeeeeccCce----eec---ccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechH
Q 017726 166 YRHPALFLVDGVSSICAI----DFR---MDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~----~~~---~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+|+++|+|++|..... ..+ ... ....+++.|++|.+ |.+| +|++++++++++++......
T Consensus 196 --~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~~~l~~~~~~~~~~------- 265 (383)
T TIGR03540 196 --YNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGNADLIAGLGKVKTN------- 265 (383)
T ss_pred --cCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc-CCccceeeEEeCCHHHHHHHHHHHHh-------
Confidence 9999999999863321 111 111 13468889999988 4555 79999999998877642110
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
. ....+.....+...++....+. +++.++.+.++++.+.+.|++.|+.+..+ .++.++++++++
T Consensus 266 -----~------~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~~~~~~~~~l~~ 329 (383)
T TIGR03540 266 -----V------DSGVFQAIQYAAIAALNGPQDV-VKEIRKIYQRRRDLLLEALKKIGIDVEKP----KATFYVWVPVPE 329 (383)
T ss_pred -----c------ccCCChHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHhCCCEecCC----CcceEEEEECCC
Confidence 0 1112222223333333322122 66778888999999999999988877765 456678899877
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeec
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHL 351 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~ 351 (367)
+.+..++++.|.+++||.+.+|..+. .++++||++.
T Consensus 330 ~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~ 367 (383)
T TIGR03540 330 GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT 367 (383)
T ss_pred CCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec
Confidence 77888999998777799999985432 2468999974
No 46
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3.9e-31 Score=240.72 Aligned_cols=307 Identities=11% Similarity=0.019 Sum_probs=222.1
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++|+.+++++.+.......|.... ..++|+.+++++|++++ +|++|+|+++++..++.+++++||+|++++|.|+
T Consensus 53 ~~~~~~~~~~~a~~~~~~~~~~Y~~~~-~~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~ 130 (370)
T PRK09105 53 CPLGPSPAARDAAARSAALSGRYDLEL-EDDLRTLFAAQEGLPAD-HVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYE 130 (370)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCch-HHHHHHHHHHHhCcChh-hEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChH
Confidence 345678888888876432212232222 77999999999999765 5999999999999999999999999999999776
Q ss_pred hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
.+. ..++..|.+++.++.+.++.+|++++++. . ++++++++++||||||.+++.+++.++++..++++++|+|
T Consensus 131 ~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~----~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvD 203 (370)
T PRK09105 131 AGW--RAADAQGAPVAKVPLRADGAHDVKAMLAA-D----PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVD 203 (370)
T ss_pred HHH--HHHHHcCCeEEEecCCCCCCCCHHHHHhc-C----CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEE
Confidence 643 56788999999999987788899999876 3 3679999999999999999999998888764468999999
Q ss_pred eeeccCcee---eccccc-cceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 176 GVSSICAID---FRMDEW-GIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 176 ~~~~~~~~~---~~~~~~-~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
++|...... .+.... ...+++.|++|.+ |.+| +|++++++++++++... + .+
T Consensus 204 EaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~~~~i~~l~~~------------------~---~~ 261 (370)
T PRK09105 204 EAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLY-GMAGMRLGLAAARPDLLAKLARF------------------G---HN 261 (370)
T ss_pred CchHHhccCcchHHHHhhCCCEEEEecccHhh-cCCccceeeeecCHHHHHHHHhc------------------C---CC
Confidence 998532211 111111 2347778999998 4666 79999999998877642 0 11
Q ss_pred CCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHh
Q 017726 250 TPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (367)
.++...+.+ +...+.+.+ +++.++++.++++.+.+.|++.|+++..+ .++ +++++++ .+..++++.|.+
T Consensus 262 ~~~~~~~~a---a~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~~~-f~~~~~~--~~~~~l~~~L~~ 331 (370)
T PRK09105 262 PLPVPAAAA---GLASLRDPKLVPQRRAENAAVREDTIAWLKKKGYKCTPS----QAN-CFMVDVK--RPAKAVADAMAK 331 (370)
T ss_pred CcCHHHHHH---HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC----CCc-EEEEeCC--CCHHHHHHHHHH
Confidence 244433333 333333222 66777888999999999999988877665 344 4456663 467899999986
Q ss_pred hCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 329 ~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+ ||.+..++. ..++++||++. ..++.+.+.++|++
T Consensus 332 ~-gI~v~~~~~-~~~~~~Ris~~-~~~~~~~l~~al~~ 366 (370)
T PRK09105 332 Q-GVFIGRSWP-IWPNWVRVTVG-SEEEMAAFRSAFAK 366 (370)
T ss_pred C-CcEEecCCC-CCCCeEEEEcC-CHHHHHHHHHHHHH
Confidence 5 999954442 23578999954 44455666655543
No 47
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-30 Score=222.67 Aligned_cols=310 Identities=13% Similarity=0.064 Sum_probs=239.9
Q ss_pred CCChHHHHHHHccCCCCC-CCC--cHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 18 VHIPDQVIRAMNRNNEDY-RSP--AVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~-~~~--~~~~~~~~~~~~la~~~~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
.++|+.+++|+++...+. .+| ...+..+.+.++.++.++.. .++.+++++|.--++..+++++..+||.|++..|-
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPv 116 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPV 116 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCC
Confidence 467888999999876542 333 23457788888888888875 45679999999999999999999999999999997
Q ss_pred cchHHHHHHHHHhCCceEEEeCCC-CC--CCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDW-GE--GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~-~~--~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
|+.+ ....+..|.++...|+.+ ++ .+|.++||+++.+ +++|++++|+||||+|.+.. +.+|.++|++
T Consensus 117 Y~PF--~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~---~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k-- 189 (388)
T COG1168 117 YPPF--YNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD---ERVKLFILCNPHNPTGRVWTKEELRKIAELCLR-- 189 (388)
T ss_pred chHH--HHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc---CCccEEEEeCCCCCCCccccHHHHHHHHHHHHH--
Confidence 7764 366788899999998863 33 5699999999986 57899999999999999974 7789999999
Q ss_pred CCcEEEEeeeeccCcee----ec---ccc--ccceEEEecCCCcccCCCcc--eeeeeC-HHHHHHhccCCCCceeechH
Q 017726 168 HPALFLVDGVSSICAID----FR---MDE--WGIDVALTGSQKALSLPTGM--GIVCAS-PKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~----~~---~~~--~~~d~~~~s~~K~~~g~~g~--g~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (367)
||+.||.|+.|+-..+. ++ +.. ....+.+.|++|+|+ ..|+ ++++.+ +++.++...
T Consensus 190 h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN-laGL~~a~~Ii~n~~lr~~~~~----------- 257 (388)
T COG1168 190 HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFN-LAGLKCAYIIISNRELRAKFLK----------- 257 (388)
T ss_pred cCCEEEeecccccccccCCCccchhhcChhhhcceEEEeecccccc-chhhhheeEEecCHHHHHHHHH-----------
Confidence 99999999998754321 11 111 134588889999996 5553 655554 443333332
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEc
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~ 313 (367)
++.... ...+|.+++.|..+|.+.-..+ +++..+.+..|.+++++.|.+. ++++..| .+.++.|+++
T Consensus 258 ----~l~~~~--~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p----~gTYL~WLD~ 326 (388)
T COG1168 258 ----RLKRNG--LHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHLPGVKVTEP----QGTYLAWLDC 326 (388)
T ss_pred ----HHHHhc--CCCCchHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHHhhCCCcEEecC----CCceeeeeec
Confidence 121111 3358898999999999887777 9999999999999999999995 8999998 5777888888
Q ss_pred CC-CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHH
Q 017726 314 PS-HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 314 ~~-~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~ 357 (367)
.. +.+.+++.+.|.++.+|.+.+|..+ ...+++|+.+....+..
T Consensus 327 r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L 373 (388)
T COG1168 327 RELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAIL 373 (388)
T ss_pred cccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHH
Confidence 33 5677899999999999999998543 34467999976655443
No 48
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-31 Score=243.69 Aligned_cols=311 Identities=14% Similarity=0.065 Sum_probs=220.1
Q ss_pred ChHHHHHHHccCCC--CCCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 20 IPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 20 ~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.|..+++++.+... ....|.......++|+.+++++ |. ++++.+++|+|+++++..++.+++++||+|++++
T Consensus 49 ~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~ 128 (394)
T PRK05942 49 APQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPS 128 (394)
T ss_pred CCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcC
Confidence 35556665544221 1223433345568888888877 44 2333488899999999999999999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
|.|+.+. ..+...|.+++.++.+.+ +.+|++++++.++ +++|+|++++|+||||.+++ +++|.++|++
T Consensus 129 P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~- 201 (394)
T PRK05942 129 PAYPAHF--RGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA----QQAKILYFNYPSNPTTATAPREFFEEIVAFARK- 201 (394)
T ss_pred CCCcchH--HHHHHcCCEEEEeecCCccCCccCHHHHHHhcc----ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHH-
Confidence 9887653 335678999999998643 4689999999886 47799999999999999998 6678888988
Q ss_pred CCCcEEEEeeeeccCcee----ec---ccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 167 RHPALFLVDGVSSICAID----FR---MDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~----~~---~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
+|++||+|++|...... .+ ... ....+++.|++|.++ .+| +|+++.++++++++.....
T Consensus 202 -~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~-~~GlRiG~i~~~~~l~~~l~~~~~--------- 270 (394)
T PRK05942 202 -YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYN-MAGWRVGFVVGNRHIIQGLRTLKT--------- 270 (394)
T ss_pred -cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccC-ChhhheeeeecCHHHHHHHHHHHh---------
Confidence 99999999998643321 11 111 134578899999883 444 7999999999888764321
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
. ..++.+.....++..+++... ..+++.++++.++++.+.+.|++.|+.+..+ .++.++|++++.+
T Consensus 271 -------~--~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~~~~f~~~~~~~~ 336 (394)
T PRK05942 271 -------N--LDYGIFSALQKAAETALQLPD-SYLQQVQERYRTRRDFLIQGLGELGWNIPPT----KATMYLWVPCPVG 336 (394)
T ss_pred -------h--cccCCCHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeeEEEEECCCC
Confidence 0 011233333344454554322 2367788889999999999998888777665 4666788998766
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 317 INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 317 ~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
.+..++.+.+.+++||.+.+|..+ ...+++||++.. +.+.+.+.|+
T Consensus 337 ~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~ 384 (394)
T PRK05942 337 MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA---DCDRLGEALD 384 (394)
T ss_pred CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC---CHHHHHHHHH
Confidence 777888887777779999988543 234689999742 2344444444
No 49
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=3.6e-31 Score=244.30 Aligned_cols=302 Identities=16% Similarity=0.082 Sum_probs=216.0
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
+++.+.+++.+.... ...|....+..++|+.+++++ |. +++++|++|+|+++++..++.+++++||.|++++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P 147 (413)
T PLN00175 68 GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAP 147 (413)
T ss_pred CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 456666666554322 223333344567777777766 43 33335999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
.|..+ ...++..|.+++.++++. ++.+|++++++++. +++|+|++++|+||||.+++ +++|.++|++ +
T Consensus 148 ~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~----~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~--~ 219 (413)
T PLN00175 148 FYDSY--EATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT----SKTRAILINTPHNPTGKMFTREELELIASLCKE--N 219 (413)
T ss_pred CchhH--HHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC----cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHH--c
Confidence 76654 355778899999999864 46889999999987 46799999999999999986 5668888888 9
Q ss_pred CcEEEEeeeeccCcee---e---cccc-ccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHH
Q 017726 169 PALFLVDGVSSICAID---F---RMDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~---~---~~~~-~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++||+|++|...... . .... .+..+++.|++|.++ ...++|++++++++++.+.....
T Consensus 220 ~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~------------- 286 (413)
T PLN00175 220 DVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHS------------- 286 (413)
T ss_pred CcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHh-------------
Confidence 9999999998754321 1 1111 245789999999995 22337999999999887753211
Q ss_pred hhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC-CC-C
Q 017726 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HI-N 318 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~ 318 (367)
. ..++.+.....++..++..... -+++.++.+.++++.+.+.|++.|+.+..+ .+++++|++++. +. +
T Consensus 287 ---~--~~~~~s~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p----~g~~f~~~~~~~~~~~~ 356 (413)
T PLN00175 287 ---F--LTFATATPMQWAAVAALRAPES-YYEELKRDYSAKKDILVEGLKEVGFKVYPS----SGTYFVMVDHTPFGFEN 356 (413)
T ss_pred ---h--ccCCCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeEEEEEeccccCCCC
Confidence 0 0223444333444444432211 267788899999999999999988877766 456677888632 44 4
Q ss_pred HHHHHHHHHhhCCeEEccCCCCC-----CCcEEEEeecC
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKV-----AGKVFRIGHLG 352 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~-----~~~~iRi~~~~ 352 (367)
..++++.|.+++||.+.||..+. ...++||++..
T Consensus 357 ~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~ 395 (413)
T PLN00175 357 DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK 395 (413)
T ss_pred HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC
Confidence 67899999878899999984331 24579999764
No 50
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.4e-31 Score=242.86 Aligned_cols=301 Identities=16% Similarity=0.135 Sum_probs=214.1
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhc----C--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----T--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~----~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.++.+.+++.+.... ...|.......++|+.++++++ . +++++|++|+|+++|+.+++.+++++||.|++++|
T Consensus 34 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p 113 (378)
T PRK07682 34 TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEP 113 (378)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCC
Confidence 344556665543221 1223223455677777777774 3 23336999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
.|+.+ ...++..|.+++.++.+. ++.+|++++++++. ++++++++++|+||||.+++ +++|.++|++
T Consensus 114 ~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~-- 185 (378)
T PRK07682 114 SFVSY--APLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT----AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEK-- 185 (378)
T ss_pred Cchhh--HHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC----cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHH--
Confidence 88754 355677899998888753 46789999999987 46799999999999999986 6778888998
Q ss_pred CCcEEEEeeeeccCceee------cccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 168 HPALFLVDGVSSICAIDF------RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~~------~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+++++|+|++|......- .... ....+++.|+||.++ .+| +|++++++++++++.....
T Consensus 186 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlR~G~~~~~~~~i~~l~~~~~----------- 253 (378)
T PRK07682 186 HDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFA-MTGWRLGFIAAPVYFSEAMLKIHQ----------- 253 (378)
T ss_pred cCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCccccc-ChhhhhhhhhcCHHHHHHHHHHHH-----------
Confidence 999999999987543211 1111 135789999999984 455 7999999999888764210
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcC-CCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP-SHI 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~ 317 (367)
+..++.+.....+...+++.... .++++++.++++++.+.+.|+++|+.+..+ .+++++|+.++ .+.
T Consensus 254 -------~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p----~g~~~~~~~~~~~~~ 321 (378)
T PRK07682 254 -------YSMMCAPTMAQFAALEALRAGND-DVIRMRDSYRKRRNFFVTSFNEIGLTCHVP----GGAFYAFPSISSTGL 321 (378)
T ss_pred -------hhccCCCHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHCCCccCCC----CeeEEEEEeccCCCC
Confidence 00122344333333333322111 267788889999999999999998877666 45566777663 356
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
+..++++.|.+++||.+.+|..+ ..++++||++..
T Consensus 322 ~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~ 358 (378)
T PRK07682 322 SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT 358 (378)
T ss_pred CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC
Confidence 78899999876679999998543 235789999764
No 51
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-31 Score=230.93 Aligned_cols=285 Identities=15% Similarity=0.127 Sum_probs=216.6
Q ss_pred CCcccccCCCCCChHHHHHHHccCC-----CCCCC-CcHHH--HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNN-----EDYRS-PAVPA--LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~-----~~~~~-~~~~~--~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
...|++....++.+.+|++++.++. +.|.. |.+.. ..++.|+.+|+++|+++.+ |+||+|+|+++++++..
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~d-IiFts~ATEs~Nlvl~~ 121 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSD-IVFTSGATESNNLVLKG 121 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCc-EEEeCCchHHHHHHHHH
Confidence 3567778888899999999999953 23333 55543 4899999999999999877 99999999999999987
Q ss_pred c-CCCCC----eEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc
Q 017726 80 T-LSPGD----RIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 80 ~-~~~gd----~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
+ +..++ .|++.+.+|.+.. +....+..|+++..+|.+.++.+|.+.+++.|+ ++|++|.+.+.+|.+|.+
T Consensus 122 v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~----~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 122 VARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR----SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred hhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC----CCceEEEEEecccCcccc
Confidence 4 34555 8999999998875 557778889999999999888899999999999 678999999999999999
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhc--cCCCCcee
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK--TAKSVRVF 231 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~--~~~~~~~~ 231 (367)
.|+++|.++|++ +++.+++|+||+.|..++|+.+.++|++++|+|||+ ||+|+|++++++.. .++. +...++.
T Consensus 198 ~Pv~EI~~icr~--~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~~-~~~~~~p~~~GGg- 272 (428)
T KOG1549|consen 198 QPVKEIVKICRE--EGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPGIGALYVRRKR-PRLRVEPPLSGGG- 272 (428)
T ss_pred ccHHHHHHHhCc--CCcEEEeehhhhcCCccccHHHcCchheeeeccccc-CCCcceEEEEccCC-CcccccCcccCCc-
Confidence 999999999999 999999999999999999999999999999999998 58889999999721 1111 1111111
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCCceE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~ 309 (367)
+...++ .+|.+.+...++..|.+...+.. ........++...+...+.+ . ...+.++.++. -...+
T Consensus 273 -----q~r~~r-----sGT~~~~~~~~~gsA~e~~~~~~-~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~-~~~~~ 340 (428)
T KOG1549|consen 273 -----QERGLR-----SGTVATPLAVGLGSAAEFVNKEM-AYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSR-YPGLV 340 (428)
T ss_pred -----cccccc-----cCCcCchhhhhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHhhhCchhhccCCcccc-cccce
Confidence 112233 44577777789999998887653 22222333455556555544 2 34444443332 22345
Q ss_pred EEEcC
Q 017726 310 AVIVP 314 (367)
Q Consensus 310 ~~~~~ 314 (367)
.|.++
T Consensus 341 ~~~~~ 345 (428)
T KOG1549|consen 341 SLSFP 345 (428)
T ss_pred eeecc
Confidence 55554
No 52
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-30 Score=239.50 Aligned_cols=301 Identities=17% Similarity=0.167 Sum_probs=219.2
Q ss_pred CCChHHHHHHHccCCCC--CCCC----cHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSP----AVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~----~~~~~~~~~~~~la~~~~~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.++++.+.+++.+.... ...| +.....+.+++.+++.+|.. +++++++++|+++++..++.+++.+||.|++
T Consensus 39 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv 118 (389)
T PRK05957 39 YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIIL 118 (389)
T ss_pred CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEE
Confidence 35677888888764321 1122 23466677777777777874 2456999999999999988888899999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
++|.|+.+. ..++..|++++.++.+.++.+|+|+++++++ +++|+|++++|+||||.++| +++|.++|++
T Consensus 119 ~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~----~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~- 191 (389)
T PRK05957 119 NTPYYFNHE--MAITMAGCQPILVPTDDNYQLQPEAIEQAIT----PKTRAIVTISPNNPTGVVYPEALLRAVNQICAE- 191 (389)
T ss_pred eCCCCcCHH--HHHHhcCCEEEEeecCCCCCcCHHHHHHhcC----cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHH-
Confidence 999877653 3457789999999988778899999999987 46799999999999999998 7788899999
Q ss_pred CCCcEEEEeeeeccCcee----ec---c-ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 167 RHPALFLVDGVSSICAID----FR---M-DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~----~~---~-~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
+|+++++|++|...... .. . ......+++.|++|.+ |.+| +|++++++++++++.....
T Consensus 192 -~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~~~~~~~~~~--------- 260 (389)
T PRK05957 192 -HGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIPIHLLEAIKKIQD--------- 260 (389)
T ss_pred -cCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhc-cCccceeEEEecCHHHHHHHHHHHh---------
Confidence 99999999998633211 01 1 1223568899999988 4555 7999999999888764311
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-C-hHHHHHHHHHHHHHHHHHHHHc-CC-ccccCCCccCCCceEEEE
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-G-LENVIERHRRLGKATRLAVEAW-GL-KNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g-~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~ 312 (367)
.+ ...++.. +...+...+.+. + +++.+++++++++.+.+.|++. ++ .+..+ .++.++|++
T Consensus 261 --------~~-~~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~----~gg~~~~~~ 324 (389)
T PRK05957 261 --------TI-LICPPVV---SQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPA----NGAFYCFLK 324 (389)
T ss_pred --------hc-ccCCCcH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCC----CeeEEEEEe
Confidence 00 1112322 223233333321 1 5667777889999999999887 53 44444 456778888
Q ss_pred cCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 313 VPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 313 ~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
++.+.+..++++.|.+++||.+.+|..+ ..++++||++..
T Consensus 325 ~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~ 366 (389)
T PRK05957 325 VNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA 366 (389)
T ss_pred CCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec
Confidence 8767788899999987779999998543 224589999743
No 53
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-31 Score=241.10 Aligned_cols=312 Identities=17% Similarity=0.121 Sum_probs=219.7
Q ss_pred cccccCC--CCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccC
Q 017726 10 NHLFVPG--PVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 10 ~~~~~~~--p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
.+.+..| +.++++.+.+++.+.... ...|.......++|+.+++++ |.. .++++++++|+++++..++.+++
T Consensus 26 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~ 105 (382)
T PRK06108 26 VLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALV 105 (382)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhc
Confidence 3444443 235577888887774332 122332334456666666654 632 33469999999999999999999
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC---CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~--- 155 (367)
.+||.|++.+|.|+... ..++..|++++.++.+. ++.+|++++++.++ ++++++++++|+||||.+++
T Consensus 106 ~~gd~vl~~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~----~~~~~i~l~~p~NPtG~~~~~~~ 179 (382)
T PRK06108 106 GPGDEVVAVTPLWPNLV--AAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT----PRTRALFINSPNNPTGWTASRDD 179 (382)
T ss_pred CCCCEEEEeCCCccchH--HHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC----ccceEEEEECCCCCCCcccCHHH
Confidence 99999999999876543 55778899999999864 34689999999886 46799999999999999986
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCcee--------ecccc-ccceEEEecCCCcccC-CCcceeeeeCHHHHHHhccC
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAID--------FRMDE-WGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~--------~~~~~-~~~d~~~~s~~K~~~g-~~g~g~~~~~~~~~~~~~~~ 225 (367)
+++|.++|++ +|+++|+|++|+..... .+... ....+++.|+||.++. +.++|++++++++++++...
T Consensus 180 ~~~l~~~~~~--~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~ 257 (382)
T PRK06108 180 LRAILAHCRR--HGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKL 257 (382)
T ss_pred HHHHHHHHHH--CCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHH
Confidence 5678888888 99999999998754321 11111 1356889999998841 23479999999998877632
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWF 304 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 304 (367)
.. + . ...++.....+...++....+ .+++.+++++++++.+.+.|++. |+.+..+ .
T Consensus 258 ~~-------------~--~---~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~ 314 (382)
T PRK06108 258 IE-------------Y--N---TSCVAQFVQRAAVAALDEGED-FVAELVARLRRSRDHLVDALRALPGVEVAKP----D 314 (382)
T ss_pred HH-------------h--c---ccCCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----C
Confidence 10 0 0 112333322333333332111 16778888999999999999887 8877765 4
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
++.+++++++...+..+++++|.+++||.+.+|... ..++++|+++..
T Consensus 315 ~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~ 364 (382)
T PRK06108 315 GAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR 364 (382)
T ss_pred eeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence 566778888655677899999877789999988532 335789999776
No 54
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-31 Score=241.65 Aligned_cols=303 Identities=13% Similarity=0.042 Sum_probs=215.2
Q ss_pred CChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
++|+.+.+++.+.... ...|.......++|+.++++++ .. .+++|++|+|+++++..++.+++.+||+|++++|
T Consensus 45 ~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p 124 (387)
T PRK08960 45 TTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADP 124 (387)
T ss_pred CCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCC
Confidence 5688888888775432 2233333556788888888874 22 3356999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH---HHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~---~i~~~~~~~~ 167 (367)
+|+.+. ..++..|.+++.++++.+ +.+|+++++++++ ++++++++++|+||||.+++.+ +|.++|++
T Consensus 125 ~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~-- 196 (387)
T PRK08960 125 GYPCNR--HFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN----ADTVGALVASPANPTGTLLSRDELAALSQALRA-- 196 (387)
T ss_pred CCcchH--HHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC----ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 888764 445667999999988654 4689999999887 4568999999999999999854 56667888
Q ss_pred CCcEEEEeeeeccCcee---ecccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 168 HPALFLVDGVSSICAID---FRMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~---~~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+|+++++|++|...... .+... ....+++.|+||.++ .+| +|++++++++++.+......
T Consensus 197 ~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~~------------- 262 (387)
T PRK08960 197 RGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFG-MTGWRLGWLVAPPAAVPELEKLAQN------------- 262 (387)
T ss_pred cCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccC-CcccEEEEEEcCHHHHHHHHHHHhh-------------
Confidence 99999999998643211 11111 124588899999884 555 79999999988877542110
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccc-cCCCccCCCceEEEEcCC-CCCH
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNC-TQKEEWFSDTVTAVIVPS-HINS 319 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 319 (367)
. ....+.....+...++....+.-+++.++.++++++.+.+.|++.|+.+. .+ .++.++|+++++ ..+.
T Consensus 263 --~---~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~f~~~~~~~~~~~~ 333 (387)
T PRK08960 263 --L---YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEP----QGAFYLYADISAFGGDA 333 (387)
T ss_pred --h---ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCC----CeeEEEEEeccccCCCH
Confidence 0 11233333233333332100112667788888999999999998876542 33 356678888865 3577
Q ss_pred HHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecC
Q 017726 320 SEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLG 352 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~ 352 (367)
.++++.|.+++||.+.+|..+. .++++||++..
T Consensus 334 ~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~ 369 (387)
T PRK08960 334 FAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ 369 (387)
T ss_pred HHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC
Confidence 8899888777799999984432 24689999764
No 55
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.5e-30 Score=235.04 Aligned_cols=316 Identities=16% Similarity=0.157 Sum_probs=238.5
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCC-----CCC----cHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDY-----RSP----AVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESAL 77 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~-----~~~----~~~~~~~~~~~~la~~~~~~~~~-~v~~~~ggt~al~~~~ 77 (367)
.+.+...|.....+...++.+....... ..+ ......+++++++++++|.++++ ..++|+|||+++..++
T Consensus 22 ~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~ 101 (380)
T PRK02769 22 QYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGC 101 (380)
T ss_pred hhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHH
Confidence 4455666766666545565555543211 111 24567789999999999998544 3589999999988766
Q ss_pred Hcc--CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 78 TNT--LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 78 ~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
.+. ..+++.|+++..+|++.. +.++.+|.+...|+..+++.+|+++|++++++++ .+|.+|++++++|.+|.+.|
T Consensus 102 ~~ar~~~~~~~ii~s~~~H~Sv~--ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~-~~t~lvv~t~gtt~tG~idp 178 (380)
T PRK02769 102 YLARELFPDGTLYYSKDTHYSVS--KIARLLRIKSRVITSLPNGEIDYDDLISKIKENK-NQPPIIFANIGTTMTGAIDN 178 (380)
T ss_pred HHHHHhCCCcEEEeCCCceehHH--HHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCC-CCcEEEEEEeCCCCCcccCC
Confidence 542 357889999999999854 6678889999999988888999999999998753 46899999999999999999
Q ss_pred HHHHHHHHHhcCCC---cEEEEeeeeccCcee-------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccC
Q 017726 156 LSKVRKLLDEYRHP---ALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ~~~i~~~~~~~~~~---~~vi~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~ 225 (367)
+++|.++|++ +| +++++|++++.+..+ +++.. ++|+++.|+||++++|.|+|+++++++..+++...
T Consensus 179 i~~I~~i~~~--~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~ 255 (380)
T PRK02769 179 IKEIQEILKK--IGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD 255 (380)
T ss_pred HHHHHHHHHH--hCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC
Confidence 9999999999 87 799999999988775 56655 89999999999998899999999999887765431
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (367)
..+... . .....+|.+....++++++++.+...|++++.+++.++++++.+.|++.|+++..+ ..
T Consensus 256 ---~~yl~~------~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~----p~ 320 (380)
T PRK02769 256 ---VDYIGS------R--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRN----PN 320 (380)
T ss_pred ---ccccCC------C--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcC----CC
Confidence 112110 0 11135567777789999999999999999999999999999999999988887764 23
Q ss_pred CceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
..+++|+.|+ +++ .+++.+... +..+||......+.+.+
T Consensus 321 ~~~v~f~~~~----~~~----~~~w~l~~~-------~~~~hi~~~~~~~~~~~ 359 (380)
T PRK02769 321 SITVVFPCPS----ERI----WKKWHLATS-------GNQAHIITMPHHNKQQI 359 (380)
T ss_pred ceEEEEcCCC----HHH----HhCeeEccc-------CCEEEEEECCCCCHHHH
Confidence 3466676542 233 234333322 23799998888876543
No 56
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-30 Score=237.85 Aligned_cols=309 Identities=14% Similarity=0.151 Sum_probs=228.6
Q ss_pred CCCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
.|.++|+.+++++.+.... ...|.. ....++|+.++++++.+.+++|++++|+++++..++.+++.+||.|+++.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~ 114 (356)
T PRK04870 36 NPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPG 114 (356)
T ss_pred CCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3567899999999875432 222322 3457999999999998765469999999999999998888999999999997
Q ss_pred cchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEE
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi 173 (367)
|+.+ ...++..|++++.+++++++.+|++++++++++ +++++|++++|+||||.+++.+++.++++. .++++|
T Consensus 115 y~~~--~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~--~~~~ii 187 (356)
T PRK04870 115 FVMY--RMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE---HRPALVFLAYPNNPTGNLFDDADVERIIEA--APGLVV 187 (356)
T ss_pred HHHH--HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc---CCCCEEEEcCCCCCCCCCCCHHHHHHHHHH--CCCEEE
Confidence 6653 466888999999999987788999999999874 367999999999999999999999999987 588999
Q ss_pred EeeeeccCcee---eccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccC
Q 017726 174 VDGVSSICAID---FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (367)
Q Consensus 174 ~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (367)
+|++|...... .........+++.|++| + +.+| +|++++++++++++..... .
T Consensus 188 ~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~~~~i~~~~~~~~--------------------~ 245 (356)
T PRK04870 188 VDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGHPAWIAELDKVRP--------------------P 245 (356)
T ss_pred EECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCCHHHHHHHHHccC--------------------C
Confidence 99998643211 01222235689999999 5 4555 7999999999888764321 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHH
Q 017726 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (367)
Q Consensus 249 ~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (367)
+..+.....+...+++.. + .+++.+++++++++.+.+.|+++ |+.+.++ .+.+++++++ +..++.+.|.
T Consensus 246 ~~~~~~~q~~a~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~l~ 315 (356)
T PRK04870 246 YNVNVLTQATALFALEHV-D-VLDAQAAQLRAERTRLAAALAALPGVTVFPS-----AANFILVRVP---DAAAVFDGLK 315 (356)
T ss_pred CcCCHHHHHHHHHHHhCH-H-HHHHHHHHHHHHHHHHHHHHHhCCCcEECCC-----CCeEEEEECC---CHHHHHHHHH
Confidence 224433333333333321 1 26777888899999999999987 8765432 3457888874 5678888885
Q ss_pred hhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 328 QRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 328 ~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
++||.++++... ..++++||++ +..++.+.+..+|++
T Consensus 316 -~~gI~v~~~~~f~~~~~~~iRis~-~~~~~~~~l~~al~~ 354 (356)
T PRK04870 316 -TRGVLVKNLSGMHPLLANCLRVTV-GTPEENAQFLAALKA 354 (356)
T ss_pred -HCCEEEEECCCCCCCCCCeEEEeC-CCHHHHHHHHHHHHH
Confidence 569999987543 2356899995 456666777776664
No 57
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-31 Score=230.36 Aligned_cols=315 Identities=18% Similarity=0.143 Sum_probs=226.2
Q ss_pred CChHHHHHHHccCCCC------CCCCcHHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 19 HIPDQVIRAMNRNNED------YRSPAVPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~~la~~~~~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
+.|+-+.+++.+.... .++++..++.+.+++++++++|.. +.++|++|.|+.+++..++++++++||+|++.
T Consensus 44 ~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~ 123 (420)
T KOG0257|consen 44 PPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVF 123 (420)
T ss_pred CCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEe
Confidence 5566666666664322 346777889999999999988864 44569999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCC--------CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHH
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESD--------WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKV 159 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~--------~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i 159 (367)
.|-+.++. ...+..|...+.|+.. .+|.+|.++++.+++ +|||+|++|+||||||.+.+ +++|
T Consensus 124 eP~fd~Y~--~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t----~kTk~Ii~ntPhNPtGkvfsReeLe~i 197 (420)
T KOG0257|consen 124 EPFFDCYI--PQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT----EKTKAIILNTPHNPTGKVFSREELERI 197 (420)
T ss_pred cCcchhhh--hHHhhcCCcceeeccccccccccCccccCChHHHHhhcc----CCccEEEEeCCCCCcCcccCHHHHHHH
Confidence 99666654 4467788888888876 357889999999999 57899999999999999986 7789
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee--------eccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCc
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID--------FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~--------~~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~ 229 (367)
+++|++ ||++||.|++|.....+ .....+...+-++|++|+++ ..| +|++++++.++..+.+...+
T Consensus 198 a~l~~k--~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~-~TGWrlGW~igp~~L~~~~~~vh~~- 273 (420)
T KOG0257|consen 198 AELCKK--HGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFG-VTGWRLGWAIGPKHLYSALFPVHQN- 273 (420)
T ss_pred HHHHHH--CCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceee-eeeeeeeeeechHHhhhhHHHHhhc-
Confidence 999999 99999999998653321 12233457789999999994 776 79999977766655543211
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH----HhC---hHHHHHHHHHHHHHHHHHHHHcCCccccCCCc
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF----EEG---LENVIERHRRLGKATRLAVEAWGLKNCTQKEE 302 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~----~~g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 302 (367)
..++.+.....|..++++.-. ..| +.++.+.++++++.+.+.|.++|+++..+
T Consensus 274 -----------------~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p--- 333 (420)
T KOG0257|consen 274 -----------------FVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGP--- 333 (420)
T ss_pred -----------------cccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC---
Confidence 111222222233333333222 121 44588899999999999999999999998
Q ss_pred cCCCceEEEEcC--------CCC----CHHHHHHHHHhhCCeEEccCCCCCCCc-------EEEEeecCCCCHHHHHHhh
Q 017726 303 WFSDTVTAVIVP--------SHI----NSSEIVRRAWQRYNLSLGLGLNKVAGK-------VFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 303 ~~~~~~~~~~~~--------~~~----~~~~l~~~L~~~~gv~v~~g~~~~~~~-------~iRi~~~~~~~~~~~~~~~ 363 (367)
.+..+++..++ .++ +.-.++.+|.++.|+.+.|+..+.... .+|+++....+..+...+.
T Consensus 334 -~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~ 412 (420)
T KOG0257|consen 334 -EGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIER 412 (420)
T ss_pred -CCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45666777765 111 334578899988899998876544332 3566554444444444443
Q ss_pred h
Q 017726 364 L 364 (367)
Q Consensus 364 l 364 (367)
|
T Consensus 413 l 413 (420)
T KOG0257|consen 413 L 413 (420)
T ss_pred H
Confidence 3
No 58
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1e-30 Score=236.96 Aligned_cols=300 Identities=16% Similarity=0.072 Sum_probs=213.6
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHHccCCCC---CeEEE
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPG---DRIIS 89 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~--~~~~v~~~~ggt~al~~~~~~~~~~g---d~vl~ 89 (367)
++++.+.+++.+.......|.......++|+.+++++ |.+ ++++|++|+|+++++..++.+++++| |.|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~ 92 (350)
T TIGR03537 13 PTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIF 92 (350)
T ss_pred CCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEE
Confidence 4466778887764332223333344567778887776 643 33269999999999999998888887 69999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHH
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~ 164 (367)
+.|.|+.+. ..++..|++++.++.+. ++.+|++++++++. +++|++++++|+||||.++| +++|.++|+
T Consensus 93 ~~p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~ 166 (350)
T TIGR03537 93 GTPGYPVYE--RGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL----EETKIVWINYPHNPTGATAPRSYLKETIAMCR 166 (350)
T ss_pred cCCCCcchH--HHHHhcCCEEEEcccCcccCCccCHHHHHHhhh----hccEEEEEeCCCCCcCcccCHHHHHHHHHHHH
Confidence 999877653 55788999999999863 35689999999987 46799999999999999998 778888898
Q ss_pred hcCCCcEEEEeeeeccCce---eeccc--cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 165 EYRHPALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~---~~~~~--~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
+ +|+++|+|++|..... ..+.. .....+++.|++|.++ .+| +|+++.++++++++......
T Consensus 167 ~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~~--------- 234 (350)
T TIGR03537 167 E--HGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSG-MTGYRSGFVAGDEKLISFLRKLRAN--------- 234 (350)
T ss_pred H--cCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccC-CccccceeeecCHHHHHHHHHHHHh---------
Confidence 8 9999999999864321 11111 1234588889999883 444 69999998888777642110
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
+ + . +.+.....++..++. .+..++++++++.++.+.+.+.|++.|+++..+ .++.++++++|++.
T Consensus 235 ---~--~---~-~~~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~----~g~~~~~~~~~~~~ 299 (350)
T TIGR03537 235 ---F--G---V-ASPDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP----DATFYLWVKVPSGI 299 (350)
T ss_pred ---h--c---c-CCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeEEEEEEECCCCC
Confidence 0 1 1 122222222222322 112256778888999999999999988776665 45667788887666
Q ss_pred CHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecC
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLG 352 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~ 352 (367)
+..++++.|.+ +||.+.+|..+. .++++||++..
T Consensus 300 ~~~~l~~~L~~-~gv~v~~g~~f~~~~~~~~Ri~~~~ 335 (350)
T TIGR03537 300 DAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVP 335 (350)
T ss_pred CHHHHHHHHHH-CCEEEcCchhhCCCCCCEEEEEecC
Confidence 78899999976 599999985432 35789999753
No 59
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-30 Score=237.92 Aligned_cols=301 Identities=15% Similarity=0.095 Sum_probs=212.4
Q ss_pred ChHHHHHHHccCC-CCCCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 20 IPDQVIRAMNRNN-EDYRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 20 ~~~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
.++.+++++.+.. .....|.......++|+.+++++ |.. .++++++|+|+++++..++.+++.+||+|++++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~ 122 (384)
T PRK06348 43 TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPY 122 (384)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 3455655444321 12233433344567888888877 322 33569999999999999999999999999999997
Q ss_pred cchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
|+.+. ..++..|.+++.++.. .++.+|+++++++++ +++++|++++|+||||.+++ +++|.++|++ +
T Consensus 123 y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~--~ 194 (384)
T PRK06348 123 FTPYK--DQIEMVGGKPIILETYEEDGFQINVKKLEALIT----SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIE--Y 194 (384)
T ss_pred CcchH--HHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC----cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--C
Confidence 76643 5567789998888864 345689999999887 46799999999999999997 5667778888 9
Q ss_pred CcEEEEeeeeccCcee---ec---ccc-ccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHH
Q 017726 169 PALFLVDGVSSICAID---FR---MDE-WGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~---~~---~~~-~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+++||+|++|...... .+ ... .+..+++.|+||.++ ...++|++++++++++.+.....
T Consensus 195 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~------------- 261 (384)
T PRK06348 195 DLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINE------------- 261 (384)
T ss_pred CeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHH-------------
Confidence 9999999998754321 11 111 235688999999985 23347999999998777653210
Q ss_pred hhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-CCC
Q 017726 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HIN 318 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~ 318 (367)
. ..++++.....++..++....+. ++++++.++++++.+.+.|++. ++.+..+ .+++++|++++. +.+
T Consensus 262 ---~--~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~~~~~~~~~~~~~ 331 (384)
T PRK06348 262 ---G--ICFSAPTISQRAAIYALKHRDTI-VPLIKEEFQKRLEYAYKRIESIPNLSLHPP----KGSIYAFINIKKTGLS 331 (384)
T ss_pred ---h--ccCCCCHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHhcCCCceeccC----CeeEEEEEecccCCCC
Confidence 1 12234443334444444332222 5677888888999999999887 6666655 466678888863 568
Q ss_pred HHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeec
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHL 351 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~ 351 (367)
..++++.+.+++||.+.+|..+. ..+++||++.
T Consensus 332 ~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 366 (384)
T PRK06348 332 SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT 366 (384)
T ss_pred HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec
Confidence 88999998777899999885432 2468999974
No 60
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.3e-30 Score=239.55 Aligned_cols=305 Identities=14% Similarity=0.112 Sum_probs=214.3
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~----~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.++.+.+++.+.... ...|.......++|+.++++++ .. ++++|++|+|+++++.+++.+++.+||.|++++|
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p 123 (391)
T PRK07309 44 TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAP 123 (391)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Confidence 355566666553221 1223333445678888888764 32 3356999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
.|... ...++..|.+++.++.+.+ +.+|++.+++++++.. ++++++++++|+||||.+++ +++|.++|++ +
T Consensus 124 ~y~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~--~ 198 (391)
T PRK07309 124 AYPGY--EPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG-DKLKAVILNYPANPTGVTYSREQIKALADVLKK--Y 198 (391)
T ss_pred CCcch--HHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC-CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHH--c
Confidence 87764 3567788999999998653 5789999999987532 36899999999999999986 7778888888 9
Q ss_pred CcEEEEeeeeccCcee----eccc--cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHH
Q 017726 169 PALFLVDGVSSICAID----FRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~----~~~~--~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
++++|+|++|...... .+.. .....+++.|+||.++ .+| +|++++++++++++.....
T Consensus 199 ~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRvG~~v~~~~~~~~~~~~~~------------- 264 (391)
T PRK07309 199 DIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHA-MTGWRIGLIFAPAEFTAQLIKSHQ------------- 264 (391)
T ss_pred CcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhcc-CccceeEEEEeCHHHHHHHHHHHh-------------
Confidence 9999999998754321 1111 1134588999999984 445 6999999999887764210
Q ss_pred hhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC--C
Q 017726 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI--N 318 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~ 318 (367)
+...+++.....++..+++....+ ....+++++++++++.+.|++.|+.+..+ .++.++|+++|++. +
T Consensus 265 -----~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~p----~gg~~~~~~l~~~~~~~ 334 (391)
T PRK07309 265 -----YLVTAATTMAQFAAVEALTNGKDD-ALPMKKEYIKRRDYIIEKMTDLGFKIIKP----DGAFYIFAKIPAGYNQD 334 (391)
T ss_pred -----hcccCCChHHHHHHHHHHhCChhH-HHHHHHHHHHHHHHHHHHHHHCCCeecCC----CeeEEEEEECCCCCCCC
Confidence 001123333333333333321111 34556777888999999999988877766 45666778886543 5
Q ss_pred HHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecCC
Q 017726 319 SSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGH 353 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~--~~~~~~iRi~~~~~ 353 (367)
..++++.|.++.||.+.+|.. ...+++|||++...
T Consensus 335 ~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~ 371 (391)
T PRK07309 335 SFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAAS 371 (391)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCC
Confidence 678888877677999999854 33457899997653
No 61
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.5e-30 Score=239.23 Aligned_cols=299 Identities=13% Similarity=0.079 Sum_probs=213.4
Q ss_pred hHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 21 PDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
++.+.+++.+.... ...|.......++|+++++++ |. +++++|++|+|+++++..++.+++.+||.|++++|
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P 126 (389)
T PRK08068 47 PEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDP 126 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCC
Confidence 45567776654322 123333345678888888887 53 33325999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~~ 167 (367)
.|+.+. ..++..|++++.++++. ++.+|++++++.+. +++++|++++||||||.+++. ++|.++|++
T Consensus 127 ~y~~~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~-- 198 (389)
T PRK08068 127 GYPDYL--SGVALARAQFETMPLIAENNFLPDYTKIPEEVA----EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKK-- 198 (389)
T ss_pred CCcchH--HHHHhcCCEEEEeecccccCCCCCHHHHHHhcc----ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHH--
Confidence 887653 45678999999999874 35678999998886 467999999999999999986 567778888
Q ss_pred CCcEEEEeeeeccCce----eecc---c-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 168 HPALFLVDGVSSICAI----DFRM---D-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~----~~~~---~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++++||+|++|..... +.+. . ..+..+++.|+||.++ .+| +|+++.++++++.+......
T Consensus 199 ~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~l~~~~~~--------- 268 (389)
T PRK08068 199 HNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFN-MAGWRVAFAVGNESVIEAINLLQDH--------- 268 (389)
T ss_pred cCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccC-CccceeEeEecCHHHHHHHHHHHhh---------
Confidence 9999999999864221 1111 1 1234688999999993 444 79999999998877643110
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
+...+++..+ .++..++..-. .-+++.++++.++++.+.+.|++.|+.+..+ .++++++++++++.
T Consensus 269 --------~~~~~~~~~q-~~~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~----~g~~~~~v~~~~~~ 334 (389)
T PRK08068 269 --------LFVSLFGAIQ-DAAIEALLSDQ-SCVAELVARYESRRNAFISACREIGWEVDAP----KGSFFAWMPVPKGY 334 (389)
T ss_pred --------ccCCCChHHH-HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeeEEEEEECCCCC
Confidence 0011222222 12222222111 2267788889999999999999988776665 46667788887667
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeec
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHL 351 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~ 351 (367)
+..++.+.|.+++||.+.+|..+ ..++++||++.
T Consensus 335 ~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~ 370 (389)
T PRK08068 335 TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL 370 (389)
T ss_pred CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc
Confidence 88899999987789999998542 23568999984
No 62
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-31 Score=241.49 Aligned_cols=302 Identities=13% Similarity=0.071 Sum_probs=216.6
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
+++.+.+++.+.... ..+|.......++|+.+++++ |.. .++++++|+|+++++..++.+++.+||.|++++|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~ 126 (391)
T PRK08361 47 TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPA 126 (391)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 356777776664322 122333345668888888887 432 23469999999999999999999999999999998
Q ss_pred cchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
|++.. ..++..|++++.++++.+ +.+|+++++++++ ++++++++++|+||||.++| +++|.++|++ +
T Consensus 127 y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~----~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~--~ 198 (391)
T PRK08361 127 FVCYV--EDAKIAEAKPIRIPLREENEFQPDPDELLELIT----KRTRMIVINYPNNPTGATLDKEVAKAIADIAED--Y 198 (391)
T ss_pred CcccH--HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc----cccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHH--c
Confidence 77643 556778999999998753 4689999999987 46799999999999999999 7788888999 9
Q ss_pred CcEEEEeeeeccCcee----eccc--cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHH
Q 017726 169 PALFLVDGVSSICAID----FRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~----~~~~--~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
++++|+|++|...... .+.. ....++++.|+||.++ .+| +|++++++++++++.....
T Consensus 199 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~GlRiG~~~~~~~~~~~~~~~~~------------- 264 (391)
T PRK08361 199 NIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFA-MTGWRLGFVIAPEQVIKDMIKLHA------------- 264 (391)
T ss_pred CeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcC-CcHhhhhhhccCHHHHHHHHHHHh-------------
Confidence 9999999998654221 1111 1246789999999984 556 7999999998877653210
Q ss_pred hhcCCccCCCCcHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-CC
Q 017726 241 YNLGTFWPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HI 317 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~~al~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~ 317 (367)
. . .+..+.....++..++..-.. ..+++.+++++++++.+.+.|+++ |+.+..+ .+++++|++++. +.
T Consensus 265 ~--~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p----~g~~~~~~~l~~~~~ 335 (391)
T PRK08361 265 Y--I---IGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEP----KGAFYVFANIDETGM 335 (391)
T ss_pred h--h---ccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC----CEEEEEEEECCCCCC
Confidence 0 0 112333222222223321111 126778888899999999999987 7777666 456678888864 56
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
+..++.+.|.+++||.+.+|..+ ..++++||++..
T Consensus 336 ~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~ 372 (391)
T PRK08361 336 SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT 372 (391)
T ss_pred CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC
Confidence 78899999887789999998543 235789999764
No 63
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.3e-30 Score=236.46 Aligned_cols=307 Identities=14% Similarity=0.138 Sum_probs=223.7
Q ss_pred CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcch
Q 017726 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~ 96 (367)
|.+.|+.+++++.+.......|.... ..++|+.++++++++++ ++++++|+++++..++.+++.+||+|++++|.|..
T Consensus 30 ~~~~~~~~~~a~~~~~~~~~~y~~~~-~~~lr~~ia~~~~~~~~-~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~ 107 (346)
T TIGR01141 30 PFGPPPKAKEALRAEADKLHRYPDPD-PAELKQALADYYGVDPE-QILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSM 107 (346)
T ss_pred CCCCCHHHHHHHHHhHHHhhcCCCCC-HHHHHHHHHHHhCcChH-HEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHH
Confidence 56778889999998643322222112 37899999999998654 59999999999998888888999999999986543
Q ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+...++..|++++.++.+.++.+|++++++++. +++++|++++|+||||.++|.+++.++|+...+++++++|+
T Consensus 108 --~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~ 181 (346)
T TIGR01141 108 --YEISAKIHGAEVVKVPLDEDGQLDLEDILVAID----DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDE 181 (346)
T ss_pred --HHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 335567889999999998888899999999875 46799999999999999999999999999833599999999
Q ss_pred eeccCcee---ecc-ccccceEEEecCCCcccC-CCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCC
Q 017726 177 VSSICAID---FRM-DEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (367)
Q Consensus 177 ~~~~~~~~---~~~-~~~~~d~~~~s~~K~~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (367)
+|+..... .+. .....++++.|++|+++. +.++|++++++++++++..... .++.
T Consensus 182 ~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~--------------------~~~~ 241 (346)
T TIGR01141 182 AYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA--------------------PFNL 241 (346)
T ss_pred chhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC--------------------CCCC
Confidence 98732211 111 112345888899999942 2337999999999888764311 1223
Q ss_pred cHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 252 SIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 252 ~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
+...+.+ +...+...+ +++.+++++++++.+.+.|+++ |+++.++ .+.++++.++. +.+++.++|.+
T Consensus 242 ~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-----~g~~~~~~~~~--~~~~~~~~L~~- 310 (346)
T TIGR01141 242 SRLAQAA---AIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVYPS-----DANFVLIRFPR--DADALFEALLE- 310 (346)
T ss_pred CHHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC-----cCCEEEEecCC--CHHHHHHHHHH-
Confidence 3333233 333333322 6778889999999999999998 8876543 34578888853 77899999975
Q ss_pred CCeEEccCCCC-CCCcEEEEeecCCCCHHHHHHhh
Q 017726 330 YNLSLGLGLNK-VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 330 ~gv~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+||.+.+|... ..++++|+|+. +.++.+...++
T Consensus 311 ~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~ 344 (346)
T TIGR01141 311 KGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAA 344 (346)
T ss_pred CCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHH
Confidence 59999988542 12678999964 43444444443
No 64
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.3e-30 Score=236.65 Aligned_cols=318 Identities=14% Similarity=0.107 Sum_probs=228.4
Q ss_pred CcccccCC--CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 9 KNHLFVPG--PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 9 ~~~~~~~~--p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
+.+.+.-+ |.++++.+.+++.+.......|... ...++|+.+++++++++ ++|++|+|+++++..++.+++++||.
T Consensus 33 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-~~~~lr~~ia~~~~~~~-~~i~~t~G~~~~l~~~~~~l~~~gd~ 110 (367)
T PRK02731 33 DIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG-SGFELKAALAEKFGVDP-ERIILGNGSDEILELLARAYLGPGDE 110 (367)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-cHHHHHHHHHHHhCcCH-HHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 34445443 3445677888777643221222111 13689999999999876 45999999999999988888899999
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~ 166 (367)
|+++.|.|.... ..++..|++++.++.+ ++.+|+++++++++ +++++|++++|+||||.++|.+++.++++..
T Consensus 111 vl~~~p~y~~~~--~~~~~~g~~~~~~~~~-~~~~~~~~l~~~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 183 (367)
T PRK02731 111 VIYSEHGFAVYP--IAAQAVGAKPVEVPAK-DYGHDLDAMLAAVT----PRTRLVFIANPNNPTGTYLPAEEVERFLAGV 183 (367)
T ss_pred EEEecCCHHHHH--HHHHHcCCeEEEeccc-CCCCCHHHHHHHhC----CCCcEEEEeCCCCCCCcCCCHHHHHHHHHhC
Confidence 999999765433 3467789999999884 56789999999987 4679999999999999999999999999884
Q ss_pred CCCcEEEEeeeeccCcee------eccc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 167 RHPALFLVDGVSSICAID------FRMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~------~~~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++++++++|++|...... ++.. .....+++.|++|.++ .+| +|++++++++++++.....
T Consensus 184 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~RiG~l~~~~~~~~~l~~~~~---------- 252 (367)
T PRK02731 184 PPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYG-LAGLRVGYGIAPPEIIDALNRVRQ---------- 252 (367)
T ss_pred CCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhc-CcccceeeeeCCHHHHHHHHHccC----------
Confidence 359999999998643311 1111 1134688889999874 444 6999999999887764311
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
++..+.. ++.++.+.+.... +++.++.++++.+.+.+.|++.|+.+.++ .+.++++++++.
T Consensus 253 ----------~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~g~~~~i~~~~~ 314 (367)
T PRK02731 253 ----------PFNVNSL---ALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGLEYIPS-----VGNFILVDFDDG 314 (367)
T ss_pred ----------CCCCCHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-----CceEEEEECCCC
Confidence 1123332 3333444443222 67778888999999999999988776543 346788888666
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 317 ~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
.+..++++.|.+ +||.++++.....++++||++. ..++.+.+.++|++
T Consensus 315 ~~~~~~~~~L~~-~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~ 362 (367)
T PRK02731 315 KDAAEAYQALLK-RGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKE 362 (367)
T ss_pred CCHHHHHHHHHH-CCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHH
Confidence 788999999975 5999998754433468999964 55666766666653
No 65
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-30 Score=237.52 Aligned_cols=308 Identities=15% Similarity=0.124 Sum_probs=227.0
Q ss_pred CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcch
Q 017726 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~ 96 (367)
|.+.++.+.+++.+...... +.......++|+.++++++++++ ++++|+|+++++..++.+++++||.|++++|.|+.
T Consensus 40 ~~~~~~~v~~a~~~~~~~~~-~~p~~g~~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~ 117 (359)
T PRK03158 40 PYGPSPKVKEAIAAHLDELA-LYPDGYAPELRTKVAKHLGVDEE-QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQ 117 (359)
T ss_pred CCCCCHHHHHHHHHHHHHhh-cCCCCcHHHHHHHHHHHhCCCHH-HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHH
Confidence 34467778888876433211 11224567899999999998754 59999999999999998888999999999998766
Q ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
.. ..+...|.++..++.+ ++.+|+++++++++ ++++++++++|+||||.++|.+++.++++..++|+++|+|+
T Consensus 118 ~~--~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~----~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De 190 (359)
T PRK03158 118 YR--HNAIIEGAEVREVPLK-DGGHDLEAMLKAID----EQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDE 190 (359)
T ss_pred HH--HHHHHcCCeEEEEecC-CCCcCHHHHHHhcC----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 43 4567789999999987 67789999998886 46799999999999999999999999998754699999999
Q ss_pred eeccCcee----e--c-cccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCcc
Q 017726 177 VSSICAID----F--R-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 177 ~~~~~~~~----~--~-~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
+|...... . . ....+..+++.|++|.++ .+| +|++++++++++++.....
T Consensus 191 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~v~~~~~~~~~~~~~~-------------------- 249 (359)
T PRK03158 191 AYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYG-LAALRVGYGIASEELIEKLNIARP-------------------- 249 (359)
T ss_pred chHhhcCCcccccHHHHHHhcCCEEEEEechHhhc-CcchhhehhcCCHHHHHHHHHhcC--------------------
Confidence 98643321 0 1 112246788899999984 445 5999999999888764311
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHH
Q 017726 248 PYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRA 326 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (367)
.+..+.....++..+++ +.. +++.++..+++++.+.+.|++.|+.+.++ .+.+++++++ .+..++++.|
T Consensus 250 ~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~g~~i~~~~~--~~~~~~~~~l 319 (359)
T PRK03158 250 PFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS-----QTNFIFVDTG--RDANELFEAL 319 (359)
T ss_pred CCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC-----cCcEEEEECC--CCHHHHHHHH
Confidence 12344433334443443 222 56667777888888999998888776543 2346777763 4678999999
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 327 WQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 327 ~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
.+ +||.+.+|..+..++++||++ +..++.+.+.++|++
T Consensus 320 ~~-~gv~v~~g~~f~~~~~iRi~~-~~~~~~~~l~~al~~ 357 (359)
T PRK03158 320 LK-KGYIVRSGAALGFPTGVRITI-GLKEQNDKIIELLKE 357 (359)
T ss_pred HH-CCeEEeeCCCCCCCCeEEEec-CCHHHHHHHHHHHHH
Confidence 75 599999986544457899994 566777777777765
No 66
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.9e-31 Score=238.17 Aligned_cols=304 Identities=14% Similarity=0.092 Sum_probs=221.8
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++|+.+++++.+.......| +.....++|+.++++++++++ +|++++|+++++..++.+++++||.|+++.|.|+
T Consensus 39 n~~~~~~~v~~a~~~~~~~~~~Y-p~~g~~~Lr~aia~~~~~~~~-~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~ 116 (366)
T PRK01533 39 NPFGCSPRVLDELQKSWLDHALY-PDGGATTLRQTIANKLHVKME-QVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFP 116 (366)
T ss_pred CCCCCCHHHHHHHHHHHHhcCcC-CCCCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHH
Confidence 46678888999887653322222 123457899999999998764 5999999999999999999999999999999766
Q ss_pred hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
.+. ..++..|.+++.++.+ ++.+|+++++++++ ++++++++|+||||||.+++.+++.++++....+.++|+|
T Consensus 117 ~~~--~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~----~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiD 189 (366)
T PRK01533 117 QYR--HHAIIEGCEVKEVALN-NGVYDLDEISSVVD----NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENTLIVID 189 (366)
T ss_pred HHH--HHHHHcCCEEEEeecC-CCCcCHHHHHHHhC----cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCCEEEEE
Confidence 543 5578889999999986 45689999999987 4679999999999999999988777776652233467789
Q ss_pred eeeccCcee------ec-cccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCc
Q 017726 176 GVSSICAID------FR-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (367)
Q Consensus 176 ~~~~~~~~~------~~-~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
++|...... .. ....+..+++.|+||.++ .+| +|++++++++++++.....
T Consensus 190 e~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-l~GlRiG~~i~~~~~~~~l~~~~~------------------- 249 (366)
T PRK01533 190 EAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYG-LASFRVGYAVGHEELIEKLNVVRL------------------- 249 (366)
T ss_pred ccHHHhhccccCcchhHHhccCCCEEEEeCchHHhc-ChHHHHhHHhCCHHHHHHHHHhcC-------------------
Confidence 998532211 11 112245689999999984 444 6999999999888864321
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHH
Q 017726 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRA 326 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (367)
++..+.....++.++++. .+ -.++.++...++++++.+.|+.+|+++..+ .+ .+++++++ +..++.+.|
T Consensus 250 -~~~~~~~~q~aa~~~l~~-~~-~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~----~~-nf~~~~~~---~~~~~~~~l 318 (366)
T PRK01533 250 -PFNVSSLAQKAATIAFGD-DE-FIEEIVRVNTEGLRQYESFCKENEIPFYQS----QT-NFIFLPVE---NGGEIYEAC 318 (366)
T ss_pred -CCCcCHHHHHHHHHHhCC-HH-HHHHHHHHHHHHHHHHHHHHHhCCCccCCC----cC-cEEEEeCC---CHHHHHHHH
Confidence 234555444444444432 11 155667777888888999998888877665 34 46778774 467899998
Q ss_pred HhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 327 WQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 327 ~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
.+ +||.|++ + ++++||+ .+..++.+.+..+|++
T Consensus 319 ~~-~GI~Vr~-~----~~~iRis-~~~~~~~~~l~~al~~ 351 (366)
T PRK01533 319 AH-AGFIIRP-F----PNGVRIT-VGTREQNEGVISVLQQ 351 (366)
T ss_pred HH-CCcEEcc-C----CCceEEe-CCCHHHHHHHHHHHHH
Confidence 75 5999997 2 4679999 5666777777777654
No 67
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-30 Score=236.24 Aligned_cols=317 Identities=15% Similarity=0.092 Sum_probs=223.5
Q ss_pred CcccccCC--CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 9 KNHLFVPG--PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 9 ~~~~~~~~--p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
+.+.+.-| |..+++.+.+++.+.......|..... .++|+.++++++++++ +|++|+|+++++..++.+++.+||.
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~ 114 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQG-RALREAIAARTGVPAD-RIILGNGSEDLIAVICRAVLRPGDR 114 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcH-HHHHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 33445443 345677888888763222222322233 3899999999998754 5999999999999999988999999
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~ 166 (367)
|++..|.|.... ..++..|++++.++.+.++.+|+++++++++ +++|++++++|+||||.++|.+++.++++..
T Consensus 115 vli~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~ 188 (371)
T PRK05166 115 VVTLYPSFPLHE--DYPTMMGARVERVTVTPDLGFDLDALCAAVA----RAPRMLMFSNPSNPVGSWLTADQLARVLDAT 188 (371)
T ss_pred EEEcCCChHHHH--HHHHHcCCeEEEeecCCCCCCCHHHHHHhhh----cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 999999776543 5567889999999998778899999999987 4669999999999999999998888888764
Q ss_pred CCCcEEEEeeeeccCcee------ecc-cc-ccceEEEecCCCccc-CCCcceeeee-CHHHHHHhccCCCCceeechHH
Q 017726 167 RHPALFLVDGVSSICAID------FRM-DE-WGIDVALTGSQKALS-LPTGMGIVCA-SPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~------~~~-~~-~~~d~~~~s~~K~~~-g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
.++++|++|++|...... ... .. ....+++.|++|.++ ...++|++++ ++++++.+.....
T Consensus 189 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~--------- 259 (371)
T PRK05166 189 PPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT--------- 259 (371)
T ss_pred CCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc---------
Confidence 458899999998643311 111 11 123588999999985 2334699775 6777766653210
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
.+..+... ..+++..+...+ +++.++.+.++++.+.+.|++.|+.+.++ .+.++|++.+
T Consensus 260 -----------~~~~~~~~---q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~-----~g~fl~~~~~- 319 (371)
T PRK05166 260 -----------PFNVNGAA---QAAALAALDDEEHLAKGVALALAERERLKKELAEMGYRIAPS-----RANFLFFDAR- 319 (371)
T ss_pred -----------CCCCCHHH---HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC-----cCCEEEEeCC-
Confidence 12234322 233333333222 66777888889999999999988765443 3446777763
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
.+..++.+.|.++ ||.+.+|..+...+++||++. ..++.+.+.+.|+
T Consensus 320 -~~~~~l~~~l~~~-gi~v~p~~~~~~~~~iRi~~~-~~~~~~~l~~~l~ 366 (371)
T PRK05166 320 -RPASAVAEALLRQ-GVIVKPWKQPGFETFIRVSIG-SPEENDHFVAALD 366 (371)
T ss_pred -CCHHHHHHHHHHC-CeEEecCCCCCCCCeEEEEcC-CHHHHHHHHHHHH
Confidence 3578899999765 999999865545678999964 4444555555554
No 68
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.98 E-value=4.1e-30 Score=236.47 Aligned_cols=303 Identities=12% Similarity=0.043 Sum_probs=213.2
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.++++.+.+++.+.... ...|.......++|+.+++++ |. +++++|++|+|+++++..++.+++.+||.|++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv 121 (388)
T PRK07366 42 LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALL 121 (388)
T ss_pred CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEE
Confidence 35567778887764321 223433345668888888887 43 34325999999999999999999999999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH---HHHHHHH
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVRKLLD 164 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~---~i~~~~~ 164 (367)
..|.|+.+. ..++..|.+++.++++.+ +.+|++++++.+. +++|++++++||||||.+++.+ +|.++|+
T Consensus 122 ~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~ 195 (388)
T PRK07366 122 LDPGYPSHA--GGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL----AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQ 195 (388)
T ss_pred cCCCCcchH--HHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc----ccceEEEEeCCCCCCCccCCHHHHHHHHHHHH
Confidence 999877653 557788999999998753 4578888888776 4679999999999999999754 5667888
Q ss_pred hcCCCcEEEEeeeeccCcee-----e---ccccc-cceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeech
Q 017726 165 EYRHPALFLVDGVSSICAID-----F---RMDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~-----~---~~~~~-~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
+ ++++||+|++|...... . ..... ...+++.|+||.++ ...++|++++++++++++......
T Consensus 196 ~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~------ 267 (388)
T PRK07366 196 Q--HDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAV------ 267 (388)
T ss_pred H--cCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhh------
Confidence 8 99999999998644211 0 11111 23478899999984 223369999999998887643210
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH--HhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEE
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 312 (367)
. + .++.+.. +++++..+. +.-+++.++.++++++.+.+.|++.|+.+..+ .+++++|++
T Consensus 268 ------~--~---~~~~~~~----~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p----~~g~f~~~~ 328 (388)
T PRK07366 268 ------V--D---FNQYRGI----LNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLP----EATMYVWAK 328 (388)
T ss_pred ------c--c---cCCCHHH----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CeeEEEEEE
Confidence 0 0 1112211 122222222 12277888899999999999999888765555 467788899
Q ss_pred cCCCC--CHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecCC
Q 017726 313 VPSHI--NSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGH 353 (367)
Q Consensus 313 ~~~~~--~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~~ 353 (367)
+++.. +..++++.|.+++||.+.+|..+. ..+++||++...
T Consensus 329 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~ 373 (388)
T PRK07366 329 LPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHD 373 (388)
T ss_pred CCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCC
Confidence 86542 467888888777799999985432 246899997543
No 69
>PRK08912 hypothetical protein; Provisional
Probab=99.98 E-value=2.9e-30 Score=237.36 Aligned_cols=302 Identities=17% Similarity=0.127 Sum_probs=214.5
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.|+.+++++.+.... ...|.......++|+.+++++ |. +++++|++|+|+++++..++.+++++||.|+++.|
T Consensus 40 ~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p 119 (387)
T PRK08912 40 GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQP 119 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCC
Confidence 356677776653321 223433344567777777765 44 23326999999999999999998999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
.|... ...++..|++++.++.+. ++.+|++++++.+. +++|++++++|+||||.+++ +++|.++|++ +
T Consensus 120 ~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~--~ 191 (387)
T PRK08912 120 LYDAY--LPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS----PRTKAVLLNNPLNPAGKVFPREELALLAEFCQR--H 191 (387)
T ss_pred Cchhh--HHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC----ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHH--C
Confidence 77654 356788899999999864 56889999999887 46799999999999999997 5568888888 9
Q ss_pred CcEEEEeeeeccCcee------e-cccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 169 PALFLVDGVSSICAID------F-RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~------~-~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
++++|+|++|...... + .... .+.++++.|+||.++ .+| +|++++++++++.+......
T Consensus 192 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~~~~~l~~~~~~---------- 260 (387)
T PRK08912 192 DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFS-LTGWKVGFVCAAPPLLRVLAKAHQF---------- 260 (387)
T ss_pred CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHHhh----------
Confidence 9999999998532211 0 1111 246799999999984 555 79999999998877542110
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC---
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--- 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--- 315 (367)
. .++.+.....++..++....+. +++.++++.++++.+.+.|++.|+.+..+ .+++++|+++++
T Consensus 261 -----~---~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 261 -----L---TFTTPPNLQAAVAYGLGKPDDY-FEGMRADLARSRDRLAAGLRRIGFPVLPS----QGTYFLTVDLAPLGL 327 (387)
T ss_pred -----c---cccCChHHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHhCCCcccCC----CcceEEEecccccCC
Confidence 0 1122222223333333211111 56778889999999999999988877765 466678888864
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecCC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLGH 353 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~----~~~~~iRi~~~~~ 353 (367)
..+..++++.|.+++||.+.+|..+ ...+++||++...
T Consensus 328 ~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~ 369 (387)
T PRK08912 328 AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKR 369 (387)
T ss_pred CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCC
Confidence 2467789999877779999998532 1246899997653
No 70
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.98 E-value=8.7e-30 Score=234.49 Aligned_cols=310 Identities=14% Similarity=0.077 Sum_probs=220.0
Q ss_pred CChHHHHHHHccCCC--CCCCCcHHHHHHHHHHHHHHHh----cC---CCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 19 HIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KT---TSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~la~~~----~~---~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
++++.+.+++.+... ...+|.. ....++|+.+++++ |. +++++|++|+|+++++..++.+++++||.|++
T Consensus 57 ~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv 135 (410)
T PRK06290 57 MADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFINPGDVTLM 135 (410)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCCCCCEEEE
Confidence 356667777665321 1222322 45678888888886 43 33336999999999999999999999999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHH
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLD 164 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~ 164 (367)
+.|.|+.+. ..++..|.++..++++.+ +.+|++++++++. +++|+|++++|+||||.+++ +++|.++|+
T Consensus 136 ~~P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~ 209 (410)
T PRK06290 136 TVPGYPVTG--THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK----EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAK 209 (410)
T ss_pred eCCCCccHH--HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc----ccceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 999877643 557788999999998753 4669999998886 46799999999999999998 466777888
Q ss_pred hcCCCcEEEEeeeeccCcee---ec---cc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechH
Q 017726 165 EYRHPALFLVDGVSSICAID---FR---MD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~---~~---~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+ +|++||+|++|...... .+ .. ..+.++++.|+||.++ .+| +|++++++++++.+......
T Consensus 210 ~--~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g-~~GlRiG~ii~~~~l~~~l~~~~~~------- 279 (410)
T PRK06290 210 E--NNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYN-MTGWRLAFVVGNELIVKAFATVKDN------- 279 (410)
T ss_pred H--cCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcC-CchhheEeEEeCHHHHHHHHHHHhc-------
Confidence 8 99999999998754321 11 11 1245799999999994 445 69999999988777643110
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
. ....+... ..++...+.+.. +++.++++.++++.+.+.|++.|+.+..+ .+++++|+++|
T Consensus 280 --------~---~~~~~~~~---q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p----~g~f~l~v~lp 341 (410)
T PRK06290 280 --------N---DSGQFIAI---QKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVGFKAEMP----GGTFYLYVKAP 341 (410)
T ss_pred --------c---ccCCcHHH---HHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCCCeecCC----CeeeEEEEECC
Confidence 0 11122222 223333333222 56778888999999999999988877665 46667788886
Q ss_pred CCC-------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC---CCCHHHHHHhhhh
Q 017726 315 SHI-------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG---HLNEVMFNFQLLF 365 (367)
Q Consensus 315 ~~~-------~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~---~~~~~~~~~~~l~ 365 (367)
++. +..+++++|.++.++.+.||... ++++||++.. ..++.+.+.++|.
T Consensus 342 ~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~ 400 (410)
T PRK06290 342 KGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIK 400 (410)
T ss_pred CccccCCCCCCHHHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHH
Confidence 543 67899999998867777776542 4689999753 4445555555444
No 71
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.98 E-value=4e-30 Score=237.07 Aligned_cols=301 Identities=15% Similarity=0.056 Sum_probs=210.3
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh----cCC---CCceEEecCChhHHHHHHHHccCCC---CCeEE
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT---SGTPFLIPTTGTGAWESALTNTLSP---GDRII 88 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~---~~~~v~~~~ggt~al~~~~~~~~~~---gd~vl 88 (367)
++++.+.+++.+.......|.......++|+.+++++ |.+ ++++|++|+|+++++..++.+++++ ||.|+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vl 121 (396)
T PRK09147 42 PTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVV 121 (396)
T ss_pred CCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEE
Confidence 4577788887764333333332334456777777765 643 3336999999999999999999999 89999
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHH
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLL 163 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~ 163 (367)
++.|.|..+. ..++..|.+++.+|++.+ +.+|++++++.+. +++|++++++||||||.+++ +++|.++|
T Consensus 122 v~~P~y~~~~--~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a 195 (396)
T PRK09147 122 CPNPFYQIYE--GAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW----ARTQLLFVCSPGNPTGAVLPLDDWKKLFALS 195 (396)
T ss_pred EcCCCccchH--HHHHhcCCEEEEeccCccccCccCHHHHHHHHh----hccEEEEEcCCCCCcCccCCHHHHHHHHHHH
Confidence 9999776543 557788999999998643 5789999988876 36799999999999999996 55677778
Q ss_pred HhcCCCcEEEEeeeeccCceee-----c-c--------ccccceEEEecCCCcccC-CCcceeeeeCHHHHHHhccCCCC
Q 017726 164 DEYRHPALFLVDGVSSICAIDF-----R-M--------DEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTAKSV 228 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~-----~-~--------~~~~~d~~~~s~~K~~~g-~~g~g~~~~~~~~~~~~~~~~~~ 228 (367)
++ ++++||+|++|......- . . ...+..+++.|+||.++. ..++|++++++++++++.....
T Consensus 196 ~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~- 272 (396)
T PRK09147 196 DR--YGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRT- 272 (396)
T ss_pred HH--cCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhh-
Confidence 88 999999999987543210 0 0 011345999999997631 2337999999999887764211
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCce
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (367)
+..+.++.....+..+++. .+.-+++.++.++++++.+.+.|++. +.+..+ .++.+
T Consensus 273 -----------------~~~~~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p----~~g~f 328 (396)
T PRK09147 273 -----------------YHGCAMPPAVQAASIAAWN--DEAHVRENRALYREKFDAVTPILAPV-LDVQLP----DAGFY 328 (396)
T ss_pred -----------------hcccCCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCC----CeeEE
Confidence 0011233332233222321 11226677888888999999988875 444444 46778
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCC
Q 017726 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHL 354 (367)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~ 354 (367)
+|++++ .+..++++.|.+++||.+.+|..+. ..+++||++....
T Consensus 329 ~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~ 380 (396)
T PRK09147 329 LWAKVP--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPL 380 (396)
T ss_pred EEEECC--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCH
Confidence 889986 4678899998777799999984321 2467999976543
No 72
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=9.1e-30 Score=230.78 Aligned_cols=307 Identities=12% Similarity=0.081 Sum_probs=222.8
Q ss_pred CCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCc
Q 017726 17 PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~ 94 (367)
+.++|+.+++++.+.... ...|.. ....++|+.++++++++++ +|++++|+++++..++.+++.+||+|++++|.|
T Consensus 33 ~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~-~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y 110 (351)
T PRK14807 33 PFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYCSVVPT-NIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSF 110 (351)
T ss_pred CCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHhCCCcc-cEEEecCHHHHHHHHHHHhcCCCCEEEEeCCCh
Confidence 557788999998774321 112221 2357899999999998764 599999999999999998899999999999976
Q ss_pred chHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
.. +...++..|++++.++.+.++.+|++++++++++ .++|+|++++|+||||.+++.+++.+++++ ++.++|+
T Consensus 111 ~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~---~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~--~~~~~iv 183 (351)
T PRK14807 111 AM--YSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK---YQPKLVFLCNPNNPTGSVIEREDIIKIIEK--SRGIVVV 183 (351)
T ss_pred HH--HHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHh--CCCEEEE
Confidence 64 3356788999999999887778999999999874 367999999999999999999999999998 7788999
Q ss_pred eeeeccCcee--ec-cccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 175 DGVSSICAID--FR-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 175 D~~~~~~~~~--~~-~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
|++|....-. .+ .......+++.|+||.++ .+| +|+++.++++++.+..... ++
T Consensus 184 De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~GlRiG~~v~~~~~~~~~~~~~~--------------------~~ 242 (351)
T PRK14807 184 DEAYFEFYGNTIVDVINEFENLIVLRTLSKAFG-LAGLRVGYAVANENILKYLNLVKS--------------------PY 242 (351)
T ss_pred eCcchhhcccchHHHhhhCCCEEEEecchHhcc-cchhceeeeecCHHHHHHHHHccC--------------------CC
Confidence 9998532210 11 112245699999999994 444 6999999999887764311 11
Q ss_pred CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHh
Q 017726 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQ 328 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (367)
..+.....++ ...+.+..+++.++.+.++++.+.+.|++. |+.+.++ .+.+++++++ +..++++.|.+
T Consensus 243 ~~~~~~q~~~---~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-----~~~~~~i~~~---~~~~~~~~l~~ 311 (351)
T PRK14807 243 NINSLSQVIA---LKVLRTGVLKERVNYILNERERLIKELSKIPGIKVYPS-----KTNFILVKFK---DADYVYQGLLE 311 (351)
T ss_pred CcCHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC-----CccEEEEEcC---CHHHHHHHHHH
Confidence 2333322333 333333235666777888899999999886 8766543 3446777774 46788888875
Q ss_pred hCCeEEccCCC-CCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 329 RYNLSLGLGLN-KVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 329 ~~gv~v~~g~~-~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+||.+.++.. ....+++||++ +..++.+.+.+.|++
T Consensus 312 -~gV~v~~~~~~~~~~~~iRis~-~~~~~~~~l~~~l~~ 348 (351)
T PRK14807 312 -RGILVRDFSKVEGLEGALRITV-SSCEANDYLINGLKE 348 (351)
T ss_pred -CCEEEEECCCCCCCCCeEEEEc-CCHHHHHHHHHHHHH
Confidence 4999987532 22346899995 455556666666654
No 73
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.98 E-value=1.5e-29 Score=231.76 Aligned_cols=316 Identities=16% Similarity=0.108 Sum_probs=230.4
Q ss_pred ccCCCCCChHHHHHHHccCCCC----CC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC----CC
Q 017726 13 FVPGPVHIPDQVIRAMNRNNED----YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----SP 83 (367)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~----~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~----~~ 83 (367)
+.-.-++..+.+.+++.++... .. .+......+++++.+++++|.+++. +++++||++++..++.++. .+
T Consensus 25 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~ggt~a~~~a~~~~~~~~~~~ 103 (371)
T PRK13520 25 LSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAY-GYITSGGTEANIQAVRAARNLAKAE 103 (371)
T ss_pred eeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCC-eEEecCcHHHHHHHHHHHHhhccCC
Confidence 3333455666667777554322 11 2345566689999999999987654 7889999999998876543 25
Q ss_pred CCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 84 GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 84 gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
+++|++.+++|++ +...++..|++++.++.+.++.+|++++++++++ ++++|++++++|+||.+.|+++|.++|
T Consensus 104 ~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----~~~~vi~~~~~~~tG~~~~l~~I~~l~ 177 (371)
T PRK13520 104 KPNIVVPESAHFS--FDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD----NTIGIVGIAGTTELGQVDPIPELSKIA 177 (371)
T ss_pred CceEEecCcchHH--HHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh----CCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence 7899999998877 4466788899999999988888999999999984 567888888999999999999999999
Q ss_pred HhcCCCcEEEEeeeeccCcee-------eccccccceEEEecCCCcccCCCcceeeee-CHHHHHHhccCCCCceeechH
Q 017726 164 DEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (367)
++ +|+++++|++|+.+..+ ++....++|++.+|+|||..++.++|+++. ++++++.+... . .+...
T Consensus 178 ~~--~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~-~-~~~~~-- 251 (371)
T PRK13520 178 LE--NGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVD-T-PYLTS-- 251 (371)
T ss_pred HH--cCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhccc-C-ccccC--
Confidence 99 99999999999865432 233345789999999998765666776665 55566655311 1 11000
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCc-cccCCCccCCCceEEEEcC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK-NCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~ 314 (367)
..++. ..+|++...++++.++++.+.++|+++++++..++++++.+.|+++|++ +..+ ...++.+.++
T Consensus 252 --~~~~~----~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-----~~~~v~~~~~ 320 (371)
T PRK13520 252 --KKQAT----LTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEPVIEP-----VLNIVAFDDP 320 (371)
T ss_pred --CCCcc----eEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCC-----CceEEEEecC
Confidence 00000 1224555567888889998888888899999999999999999998887 4433 2346777764
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+..++.++|.++ ||.+..+. .+.++|++++...+++|+
T Consensus 321 ---~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edi 358 (371)
T PRK13520 321 ---NPDEVREKLRER-GWRVSVTR---CPEALRIVCMPHVTREHI 358 (371)
T ss_pred ---CHHHHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHH
Confidence 577899999765 99887643 246799998766554443
No 74
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.98 E-value=2.5e-30 Score=240.78 Aligned_cols=309 Identities=15% Similarity=0.056 Sum_probs=217.5
Q ss_pred HHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHH
Q 017726 22 DQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW 99 (367)
Q Consensus 22 ~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~ 99 (367)
+.+.+++.+.......|.......++|+.++++++. ..+++|++|+|+++++..++.++++|||.|++.+|.|+.+
T Consensus 101 p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~-- 178 (431)
T PRK15481 101 PDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSS-- 178 (431)
T ss_pred HHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHH--
Confidence 346666665433222333334456899999999873 3445699999999999999999999999999999987664
Q ss_pred HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEE-ecCCCccccccHH---HHHHHHHhcCC-CcEEEE
Q 017726 100 IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV-HNETATGVTNNLS---KVRKLLDEYRH-PALFLV 174 (367)
Q Consensus 100 ~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~-~~~n~tG~~~~~~---~i~~~~~~~~~-~~~vi~ 174 (367)
...++..|++++.++.+++ .+|+++++++++ +++|+++++ +||||||.+++.+ +|.++|++ + +++||+
T Consensus 179 ~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~----~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~--~~~~~ii~ 251 (431)
T PRK15481 179 INMLRYAGFSASPVSVDAE-GMQPEKLERALA----QGARAVILTPRAHNPTGCSLSARRAAALRNLLAR--YPQVLVII 251 (431)
T ss_pred HHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh----cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHh--cCCceEEe
Confidence 3567889999999998755 489999999987 357888887 9999999999875 88899988 7 999999
Q ss_pred eeeeccCcee--ec-cc-cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 175 DGVSSICAID--FR-MD-EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 175 D~~~~~~~~~--~~-~~-~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
|++|...... .+ .. .....+++.|+||.++...++|+++.++++++++..... .. .+.
T Consensus 252 De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~---------------~~---~~~ 313 (431)
T PRK15481 252 DDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRLN---------------SG---TQW 313 (431)
T ss_pred cCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHHHHHHHHHh---------------cc---ccC
Confidence 9998744211 01 11 123568999999999633446999999998887753211 01 112
Q ss_pred CcHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 251 PSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
.+.....++..++..-. ..-+++.++.+.++++.+.+.|++.|+.+..| .+++++|+++++ +..++++.|.+
T Consensus 314 ~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~p----~gg~f~~~~l~~--~~~~~~~~l~~- 386 (431)
T PRK15481 314 VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPSP----GDGLNLWLPLDT--DSQATALTLAK- 386 (431)
T ss_pred CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC----CCeEEEEEECCC--CHHHHHHHHHH-
Confidence 34433333343443211 01156778889999999999999988776555 467788888853 46789998864
Q ss_pred CCeEEccCCCCC---CCcEEEEeecCC-CCHHHHHHhhh
Q 017726 330 YNLSLGLGLNKV---AGKVFRIGHLGH-LNEVMFNFQLL 364 (367)
Q Consensus 330 ~gv~v~~g~~~~---~~~~iRi~~~~~-~~~~~~~~~~l 364 (367)
+||.+.+|..+. .++++||++... .++.+...+.|
T Consensus 387 ~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l 425 (431)
T PRK15481 387 SGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADL 425 (431)
T ss_pred CCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHH
Confidence 599999985432 235799996542 23334444444
No 75
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.98 E-value=1e-29 Score=231.78 Aligned_cols=322 Identities=12% Similarity=0.121 Sum_probs=224.2
Q ss_pred CCChHHHHHHHccCCCCCCC---------CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEE
Q 017726 18 VHIPDQVIRAMNRNNEDYRS---------PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRII 88 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~~~---------~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl 88 (367)
..+.+++.+++.++.....+ ....+...++++.+++++|.++ +++++|+++++..++.+++.+||.|+
T Consensus 18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~---~~i~~g~~~a~~~~~~~l~~~gd~Vl 94 (370)
T TIGR02539 18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDE---ARVTHGAREGKFAVMHALCKEGDWVV 94 (370)
T ss_pred CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCc---eEEECChHHHHHHHHHHhhCCCCEEE
Confidence 35788888998887553211 1122356788888999999975 45679999999999999999999999
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccC---CCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~---~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
+..++|++.. ..++..|++++.++.+. ++.+|++++++++++.+ .+++++|++++|+||+|.+.|+++|.++|
T Consensus 95 ~~~~~h~s~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la 172 (370)
T TIGR02539 95 LDGLAHYTSY--VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVC 172 (370)
T ss_pred ECCcccHHHH--HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHH
Confidence 9888888764 45688899999999763 46789999999987421 02578999999999999999999999999
Q ss_pred HhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 164 DEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
++ +|+++++|++|+.+..+.+....+.|+++.|+||+++++.++|++++++++++.+.....+ +..+ .. .+.
T Consensus 173 ~~--~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~-~~~~--~~--~~~- 244 (370)
T TIGR02539 173 RE--KGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRY-SPVK--EV--ELL- 244 (370)
T ss_pred HH--cCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccC-Cccc--ee--eee-
Confidence 99 9999999999999876666655678999999999997656689999999999888754321 1110 00 000
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC-------
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH------- 316 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------- 316 (367)
+ .+.......++.+++....+. ++.. .+..++++++++.|+++|++++...+ ...+++++++|.-
T Consensus 245 ~----~~~~~~~~~~~~~al~~~~~~-l~~~-~~~~~~~~~l~~~L~~~g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~ 316 (370)
T TIGR02539 245 G----CTSRGAPIVTMMASFPHVVER-VKRW-DEEVKKTRWFVAELEDIGFIQLGQKP--KEHDLVKFETPGFHEIAQKH 316 (370)
T ss_pred c----ccccccHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHhCCcEEEccCC--CcCceEEEECCchhHHhhhh
Confidence 1 112222234444455443222 3333 33344567999999999988753222 2344666776421
Q ss_pred -CCHHHHHHHHHhhCCeE-EccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 317 -INSSEIVRRAWQRYNLS-LGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 317 -~~~~~l~~~L~~~~gv~-v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
.+...+.+.|.++ ||. ++++. +.++||+.++ ..++.+....+|+
T Consensus 317 ~~~~~~~~~~L~e~-GI~~ir~~~----~~~iRis~~~~t~e~i~~l~~~L~ 363 (370)
T TIGR02539 317 KRRGYFLYEELKKR-GIHGIRSGQ----TKYFKLSVYGLTKEQVEYVVDSFE 363 (370)
T ss_pred ccccHHHHHHHHhC-CCccccCCc----ceEEEEEecCCCHHHHHHHHHHHH
Confidence 1234688888765 997 55322 3589999633 3444555555554
No 76
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.98 E-value=8.8e-30 Score=234.92 Aligned_cols=307 Identities=17% Similarity=0.141 Sum_probs=217.6
Q ss_pred hHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~ 94 (367)
++.+.+++.+.... ...|.......++|+.+++++ |.. .++++++++|+++++..++.+++.+||.|++++|.|
T Consensus 46 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y 125 (393)
T PRK05764 46 PEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYW 125 (393)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCC
Confidence 46666666553321 222333344577888888887 322 234699999999999999998899999999999987
Q ss_pred chHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCC
Q 017726 95 FSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHP 169 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~ 169 (367)
+.. ..+++..|++++.++.+. ++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++ +|
T Consensus 126 ~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~--~~ 197 (393)
T PRK05764 126 VSY--PEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT----PKTKALILNSPSNPTGAVYSPEELEAIADVAVE--HD 197 (393)
T ss_pred cch--HHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC----ccceEEEEECCCCCCCcccCHHHHHHHHHHHHH--CC
Confidence 764 355778899999999864 35688999999987 46799999999999999986 6778888888 99
Q ss_pred cEEEEeeeeccCcee------e-c--cccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 170 ALFLVDGVSSICAID------F-R--MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~------~-~--~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+++++|++|+..... + . ....+.++++.|++|.++ .+| +|+++.++++++++.....
T Consensus 198 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~-~~G~RiG~i~~~~~~~~~~~~~~~----------- 265 (393)
T PRK05764 198 IWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYA-MTGWRLGYAAGPKELIKAMSKLQS----------- 265 (393)
T ss_pred cEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCccccc-CccceeEEEecCHHHHHHHHHHHh-----------
Confidence 999999998653321 0 1 122346899999999984 455 6999999998887764211
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
.. .+.++.....++..++... ...+++.+++++++++.+.+.|++. |+.+..+ .++.+++++++...
T Consensus 266 -----~~--~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~----~g~~~~~~~~~~~~ 333 (393)
T PRK05764 266 -----HS--TSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP----EGAFYVFPNVSKLL 333 (393)
T ss_pred -----hc--ccCCChHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC----CcceEEEEeccccc
Confidence 00 1123333323333333311 1226677888889999999999998 8887765 45667777775433
Q ss_pred -----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 318 -----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 318 -----~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+..++.+.|.+++||.+.+|..+..++++||++....++.+.
T Consensus 334 ~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~ 380 (393)
T PRK05764 334 GKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEE 380 (393)
T ss_pred ccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHH
Confidence 247898888777899999986554468899997654333333
No 77
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.98 E-value=6.1e-30 Score=232.66 Aligned_cols=309 Identities=13% Similarity=0.096 Sum_probs=220.7
Q ss_pred CCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 17 PVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
|.++++.+.+++.+.... ...|.. ....++|+.++++++++++ +|++|+|+++++..++.+++++||.|++++|.|+
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~~y~~-~~~~~lr~aia~~~~~~~~-~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~ 112 (353)
T PRK05387 35 PYPPSPKVLEAIRAALGDDLRLYPD-PNADALRQAIAAYYGLDPE-QVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYS 112 (353)
T ss_pred CCCCCHHHHHHHHHHhhhhhhcCCC-CcHHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHH
Confidence 345577888888764432 112221 2347999999999998764 5999999999999999999999999999999775
Q ss_pred hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
.+ ...++..|++++.++.++++.+|++++++ +++++++++||||||.++|.+++.++++.. +++++++|
T Consensus 113 ~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~--------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~-~~~~livD 181 (353)
T PRK05387 113 FY--PVYAGLYGIPYEEIPLDDDFSIDVEDYLR--------PNGGIIFPNPNAPTGIALPLAEIERILAAN-PDSVVVID 181 (353)
T ss_pred HH--HHHHHHcCCEEEEeecCCCCCCCHHHHHh--------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-CCcEEEEe
Confidence 43 34467889999999998778899998863 237899999999999999999999999873 39999999
Q ss_pred eeeccCcee--ecc-ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 176 GVSSICAID--FRM-DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 176 ~~~~~~~~~--~~~-~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
++|...... ... ......+++.|++|.++ .+| +|++++++++++++..... .+..++
T Consensus 182 e~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlR~G~~~~~~~~~~~l~~~~~-----------------~~~~~~ 243 (353)
T PRK05387 182 EAYVDFGGESAIPLIDRYPNLLVVQTFSKSRS-LAGLRVGFAIGHPELIEALNRVKN-----------------SFNSYP 243 (353)
T ss_pred CcccccCCcchHHHHhhCCCEEEEEehhHhhc-chhhhceeeecCHHHHHHHHHhhc-----------------cCCCCC
Confidence 998532211 111 12245799999999884 334 7999999999887764311 001233
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhC
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRY 330 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 330 (367)
.+.....++..++.. ...+++.+++++++++.+.+.|++.|+.+.++ .+++++++++ +.+..++++.|.+ +
T Consensus 244 ~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-----~~~~~~~~~~-~~~~~~~~~~l~~-~ 314 (353)
T PRK05387 244 LDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPS-----KANFVFARHP-SHDAAELAAKLRE-R 314 (353)
T ss_pred cCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCC-----cCcEEEEECC-CCCHHHHHHHHHH-C
Confidence 555444444444432 11266778888999999999999988766443 3446778874 5678899999965 5
Q ss_pred CeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 331 NLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 331 gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
||.++....+...+++|+++. ..++.+...++|++
T Consensus 315 gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~ 349 (353)
T PRK05387 315 GIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKE 349 (353)
T ss_pred CEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 999975432333568999964 44555555555543
No 78
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.98 E-value=1.7e-30 Score=235.66 Aligned_cols=300 Identities=15% Similarity=0.102 Sum_probs=220.0
Q ss_pred CCChHHHHHHHccCCCCCC-----CCcHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHHccCC---------
Q 017726 18 VHIPDQVIRAMNRNNEDYR-----SPAVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLS--------- 82 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~~-~~~~v~~~~ggt~al~~~~~~~~~--------- 82 (367)
...+..+.+.+....+... ++......+++++++++++|.+ .+.++++|+|||+|+..++.++..
T Consensus 9 ~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~ 88 (345)
T cd06450 9 MDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAG 88 (345)
T ss_pred CcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcc
Confidence 3344555666665444322 2334566777888888899987 444589999999999988876532
Q ss_pred ---CC--CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcc--CCCCccEEEEEecCCCcccccc
Q 017726 83 ---PG--DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 83 ---~g--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~--~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
++ +.|+++++.|++. ...++..|.+++.++.++++.+|++++++++++. ...+++++++++++|++|.+.|
T Consensus 89 ~~~~~~~~~v~~~~~~h~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~ 166 (345)
T cd06450 89 GGRGIDKLVIVCSDQAHVSV--EKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP 166 (345)
T ss_pred cccccCCeEEEEcCcchhHH--HHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC
Confidence 23 3667777777664 3456667999999999887889999999999851 0026789999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCceeecccc------ccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~------~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
+++|.++|++ +|+++++|++|+.+..+.+... .++|++++|+||++++|.|+|+++.+
T Consensus 167 ~~~i~~~~~~--~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-------------- 230 (345)
T cd06450 167 LEEIADLAEK--YDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-------------- 230 (345)
T ss_pred HHHHHHHHHH--hCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH--------------
Confidence 9999999999 9999999999988765443221 26899999999999888888888765
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCce
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTV 308 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 308 (367)
.+++.++++.+...|+++++++..++++++.+.|+++ ++.+..+ ....+
T Consensus 231 --------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~i 280 (345)
T cd06450 231 --------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE----PNLSL 280 (345)
T ss_pred --------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceeE
Confidence 1455667777888889999999999999999999997 7776553 12346
Q ss_pred EEEEcCC----CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCC-CH--HHHHHhhhhc
Q 017726 309 TAVIVPS----HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHL-NE--VMFNFQLLFQ 366 (367)
Q Consensus 309 ~~~~~~~----~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~-~~--~~~~~~~l~~ 366 (367)
+.|+.+. +.+..++.++|.++ |+.+.++.....+.++|+++.... +. .|.+.+.|.+
T Consensus 281 v~f~~~~~~~~~~~~~~i~~~L~~~-g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 281 VCFRLKPSVKLDELNYDLSDRLNER-GGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEEECCcchhhHHHHHHHHHHHhc-CCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 7787754 24567899999765 555544432224567999988765 43 4445555543
No 79
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=3.6e-29 Score=229.45 Aligned_cols=299 Identities=14% Similarity=0.124 Sum_probs=219.8
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------CCCCeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 38 PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------SPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 38 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
+......+++++.+++++|+++.+ +++++|+++++..++.++. .+||+|++++++|++ +...++..|++++
T Consensus 55 ~~~~~~~~~~~~~la~~~g~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~--~~~~~~~~G~~~~ 131 (373)
T TIGR03812 55 PGTKKIEEEVVGSLGNLLHLPDAY-GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS--FEKAAEMLGLELR 131 (373)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCC-eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH--HHHHHHHcCCeEE
Confidence 455677789999999999997654 6778899999887765542 467899999998877 3456788899999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCce--------
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-------- 183 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-------- 183 (367)
.++.+.++.+|++++++++++ ++..+++.+++||||.+.|+++|.++|++ +|+++++|++|+.+..
T Consensus 132 ~v~~~~~~~~d~~~l~~~l~~----~~~~vv~~~~~~~tG~~~~~~~i~~l~~~--~~~~livD~a~~~~~~~~~~~~~~ 205 (373)
T TIGR03812 132 YAPLDEDYTVDVKDVEDLIDD----NTIGIVGIAGTTELGQIDDIEELSKIALE--NGIYLHVDAAFGGFVIPFLKKGYN 205 (373)
T ss_pred EEeeCCCCCcCHHHHHHHHhh----CcEEEEEECCCCCCCccCCHHHHHHHHHH--cCCeEEEEcCchhHHHHHHhcCCC
Confidence 999988888999999999974 44555555588999999999999999999 9999999999975532
Q ss_pred --eeccccccceEEEecCCCcccCCCcce-eeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHH
Q 017726 184 --DFRMDEWGIDVALTGSQKALSLPTGMG-IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLR 260 (367)
Q Consensus 184 --~~~~~~~~~d~~~~s~~K~~~g~~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 260 (367)
.++....++|++++|+|||..++.++| +++.++++++.+... . .+... .......++++...++++.
T Consensus 206 ~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~-~~~~~--------~~~~~~~gt~~~~~~~~~~ 275 (373)
T TIGR03812 206 PPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-A-PYLTV--------KKQATITGTRSGASAAATY 275 (373)
T ss_pred CCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhccc-C-cccCC--------CCCcceEeechhHHHHHHH
Confidence 233333478999999999866665565 455678877766421 1 11100 0000012457777788999
Q ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC
Q 017726 261 AALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK 340 (367)
Q Consensus 261 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~ 340 (367)
++++.+.++|++++.++..++++++++.|+++|+....+ + .. .++.++.+ +..++.++|.++ ||.+..+.
T Consensus 276 ~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~--~~-~~v~~~~~---~~~~v~~~L~~~-gi~v~~~~-- 345 (373)
T TIGR03812 276 AVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE-P--VL-NIVAFEVD---DPEEVRKKLRDR-GWYVSVTR-- 345 (373)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC-C--Cc-eEEEEEeC---CHHHHHHHHHHC-CceeccCC--
Confidence 999988888899999999999999999999987653332 1 23 35667764 356899999765 99987642
Q ss_pred CCCcEEEEeecCCCCH--HHHHHhhhhc
Q 017726 341 VAGKVFRIGHLGHLNE--VMFNFQLLFQ 366 (367)
Q Consensus 341 ~~~~~iRi~~~~~~~~--~~~~~~~l~~ 366 (367)
.+.++|+++....+. .|.+.+.|++
T Consensus 346 -~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 346 -CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 246899998765544 4555555544
No 80
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.97 E-value=7.5e-30 Score=241.97 Aligned_cols=304 Identities=13% Similarity=0.077 Sum_probs=208.5
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
++|+.+++++.+.......|....+..++|+.|++++ ++++ ++|++|+|+++++.+++.+++++||.|+++.|
T Consensus 162 ~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~-~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P 240 (517)
T PRK13355 162 RTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDV-DDIYTGNGVSELINLSMSALLDDGDEVLIPSP 240 (517)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCCh-hHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4488889988875443334554566789999999998 4554 45999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
.|+.+. ..++..|.+++.++++. ++.+|+++++++++ +++|+|++++||||||.+++ +++|.++|++
T Consensus 241 ~y~~y~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~----~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~-- 312 (517)
T PRK13355 241 DYPLWT--ACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT----SRTKAIVIINPNNPTGALYPREVLQQIVDIARE-- 312 (517)
T ss_pred CCcCHH--HHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC----cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 887643 55778899999998864 46789999999987 47799999999999999998 6778888998
Q ss_pred CCcEEEEeeeeccCcee----eccccc--c-ceEEEecCCCcccCCCc--ceeeeeC--HHHHHHhccCCCCceeechHH
Q 017726 168 HPALFLVDGVSSICAID----FRMDEW--G-IDVALTGSQKALSLPTG--MGIVCAS--PKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~----~~~~~~--~-~d~~~~s~~K~~~g~~g--~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++++||+|++|...... .++... + ..+++.|+||.++ .+| +|+++.+ +++++.+....
T Consensus 313 ~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~-~~G~RiG~~i~~~~~~~~~~~~~~l---------- 381 (517)
T PRK13355 313 HQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM-IAGYRIGWMILSGNKRIAKDYIEGL---------- 381 (517)
T ss_pred cCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc-CcccceEEEEeeCchhhHHHHHHHH----------
Confidence 99999999998743321 111111 1 2344589999973 444 7999853 44332221100
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHH--HhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEc
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 313 (367)
.... .. ....+.....+...++.... +.-++.. ++..+.++++.+.|+++ |+.+..| .+++++|+++
T Consensus 382 --~~~~-~~--~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~g~~~~~p----~g~fy~~~~l 451 (517)
T PRK13355 382 --NMLA-NM--RLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYNALNAIPGISAVKP----KAAFYIFPKI 451 (517)
T ss_pred --HHHh-cC--cCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCcccCCC----CeeeEEEeec
Confidence 0000 00 11244433344444543110 0112222 34455678999999988 8888777 5666777777
Q ss_pred CCC----CCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecC
Q 017726 314 PSH----INSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLG 352 (367)
Q Consensus 314 ~~~----~~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~ 352 (367)
+.+ .+..+++..+.++.||.+.+|..+. .+++|||++..
T Consensus 452 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~ 496 (517)
T PRK13355 452 DVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLP 496 (517)
T ss_pred CcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCC
Confidence 432 2456777776677799999985442 45789999853
No 81
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.5e-29 Score=232.01 Aligned_cols=304 Identities=13% Similarity=0.062 Sum_probs=209.8
Q ss_pred ChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cCC-CCc-eEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 20 IPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KTT-SGT-PFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~~-~~~-~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.|..+++++.+.... ..+|.......++|+.+++++ |.+ .++ +|++|+|+++++..++.+++.+||.|++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~ 126 (403)
T PRK08636 47 TPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPD 126 (403)
T ss_pred CCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcC
Confidence 355566666553221 233443455667788887776 543 333 599999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHH----HHHHhccCCCCccEEEEEecCCCccccccH---HHHHHH
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVL----ASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKL 162 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l----~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~ 162 (367)
|.|+... ..++..|.+++.++++ .++.+|++.+ ++++++.. ++++++++++||||||.+++. ++|.++
T Consensus 127 P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~ 203 (403)
T PRK08636 127 PAYPIHS--QAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS-PKPKYVVVNFPHNPTTATVEKSFYERLVAL 203 (403)
T ss_pred CCCcchH--HHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc-CCceEEEEeCCCCCCCccCCHHHHHHHHHH
Confidence 9877653 5577789999999874 3467887754 55555433 578999999999999999975 567778
Q ss_pred HHhcCCCcEEEEeeeeccCcee----ec---cccc-cceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 163 LDEYRHPALFLVDGVSSICAID----FR---MDEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 163 ~~~~~~~~~vi~D~~~~~~~~~----~~---~~~~-~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
|++ ++++||+|++|...... .+ .... ...+++.|+||.++ ...++|+++.++++++.+.....
T Consensus 204 a~~--~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~------ 275 (403)
T PRK08636 204 AKK--ERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKS------ 275 (403)
T ss_pred HHH--cCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHH------
Confidence 888 99999999998744321 11 1111 23466789999993 23447999999999887764211
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
.. + .+++...+. ++..++.... .-++++++.+.++++.+.+.|++.|+.+..+ .++.++|+++
T Consensus 276 -------~~-~---~~~~~~~q~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p----~~g~~~~~~l 338 (403)
T PRK08636 276 -------WL-D---YGMFTPIQV-AATIALDGDQ-SCVEEIRETYRKRRDVLIESFANAGWELQKP----RASMFVWAKI 338 (403)
T ss_pred -------Hh-c---ccCChHHHH-HHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CcceEEEEEC
Confidence 00 0 111233222 2222332111 1267778888999999999999888776665 4667889998
Q ss_pred CCC---CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeec
Q 017726 314 PSH---INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHL 351 (367)
Q Consensus 314 ~~~---~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~ 351 (367)
++. .+..++++.+.+++||.+.+|..+ ..++++||++.
T Consensus 339 ~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~ 381 (403)
T PRK08636 339 PEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI 381 (403)
T ss_pred CCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec
Confidence 653 346789888777779999998443 23468999975
No 82
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.97 E-value=1.2e-29 Score=234.75 Aligned_cols=303 Identities=14% Similarity=0.068 Sum_probs=214.0
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcC----------C-CCceEEecCChhHHHHHHHHccCCCCC
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT----------T-SGTPFLIPTTGTGAWESALTNTLSPGD 85 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~----------~-~~~~v~~~~ggt~al~~~~~~~~~~gd 85 (367)
.+++.+.+++.+.... ...|.......++|+.++++++. . .+++|++|+|+++++.+++.+++.+||
T Consensus 50 ~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd 129 (412)
T PTZ00433 50 LTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGD 129 (412)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCC
Confidence 3678888888774332 23343334567899999998862 1 235699999999999999999999999
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHH
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVR 160 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~ 160 (367)
.|+++.|.|..+ ...++..|+++..++.+. ++.+|++++++++. +++++|++++||||||.+++ +++|.
T Consensus 130 ~vlv~~P~y~~~--~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~NPtG~~~s~~~~~~l~ 203 (412)
T PTZ00433 130 NILVPAPGFPHY--ETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD----DRTKALIMTNPSNPCGSNFSRKHVEDII 203 (412)
T ss_pred EEEEccCCcccH--HHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc----cCceEEEEeCCCCCCCcccCHHHHHHHH
Confidence 999999987764 355788999999999864 45789999999887 46799999999999999887 56678
Q ss_pred HHHHhcCCCcEEEEeeeeccCcee----e---ccccccceEEEecCCCccc-CCCcceeeee------CHHHHHHhccCC
Q 017726 161 KLLDEYRHPALFLVDGVSSICAID----F---RMDEWGIDVALTGSQKALS-LPTGMGIVCA------SPKALEASKTAK 226 (367)
Q Consensus 161 ~~~~~~~~~~~vi~D~~~~~~~~~----~---~~~~~~~d~~~~s~~K~~~-g~~g~g~~~~------~~~~~~~~~~~~ 226 (367)
++|++ +|++||+|++|...... . ........+++.|+||.++ ...++|++++ .+++++.+....
T Consensus 204 ~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~ 281 (412)
T PTZ00433 204 RLCEE--LRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG 281 (412)
T ss_pred HHHHH--cCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh
Confidence 88888 99999999998743211 0 1111123578899999983 2244799986 234555544211
Q ss_pred CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCC
Q 017726 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFS 305 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 305 (367)
. . .+..+.....++..++..-.+.-+++.+++++++++.+.+.|++. |+.+..+ .+
T Consensus 282 ~----------------~---~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~g 338 (412)
T PTZ00433 282 M----------------L---VCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMP----RG 338 (412)
T ss_pred h----------------c---cCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----Ce
Confidence 0 0 112333322333333322101127778888999999999999986 7776665 45
Q ss_pred CceEEEEcCC----C-CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 306 DTVTAVIVPS----H-INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 306 ~~~~~~~~~~----~-~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
++++|++++. + .+..++++.|.+++||.+.+|..+...+++||++..
T Consensus 339 g~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~ 390 (412)
T PTZ00433 339 SMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR 390 (412)
T ss_pred eEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC
Confidence 6678888753 2 256789999987779999998655446789999754
No 83
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.97 E-value=1.1e-29 Score=233.78 Aligned_cols=311 Identities=14% Similarity=0.047 Sum_probs=215.1
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh----c----CCCCceEEecCChhHHHHHHHHccCCCCCe--EE
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----K----TTSGTPFLIPTTGTGAWESALTNTLSPGDR--II 88 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~----~----~~~~~~v~~~~ggt~al~~~~~~~~~~gd~--vl 88 (367)
++++.+.+++.+.......|.......++|+.+++++ | +++.++|++|+|+++++..++.+++++||. |+
T Consensus 41 ~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vl 120 (393)
T TIGR03538 41 PTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVV 120 (393)
T ss_pred CCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEE
Confidence 5678888888875433333433344567888888877 3 333346999999999999999999999986 88
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHH
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLL 163 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~ 163 (367)
++.|.|..+. ..++..|++++.++++++ +.+|++++++++. +++|+|++++||||||.+++ +++|.++|
T Consensus 121 v~~P~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~----~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a 194 (393)
T TIGR03538 121 MPNPFYQIYE--GAALLAGAEPYFLNCTAENGFLPDFDAVPESVW----RRCQLLFVCSPGNPTGAVLSLDTLKKLIELA 194 (393)
T ss_pred ecCCCCcchH--HHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh----hcceEEEEeCCCCCcCcccCHHHHHHHHHHH
Confidence 8888766543 457789999999998643 5679999999887 36799999999999999998 56777888
Q ss_pred HhcCCCcEEEEeeeeccCcee-----ec-------c--ccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCC
Q 017726 164 DEYRHPALFLVDGVSSICAID-----FR-------M--DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSV 228 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~-----~~-------~--~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~ 228 (367)
++ ++++||+|++|...... .+ . ......+++.|+||.++ ...++|+++.++++++++.....
T Consensus 195 ~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~- 271 (393)
T TIGR03538 195 DQ--YGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRT- 271 (393)
T ss_pred HH--CCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHH-
Confidence 88 99999999998743321 00 0 01124589999999753 22447999999998887753210
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCce
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (367)
+..++.+...+.++..++. .+.-+++.++.++++++.+.+.|++. +.+..+ .++.+
T Consensus 272 -----------------~~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p----~gg~f 327 (393)
T TIGR03538 272 -----------------YHGCAMPIPTQLASIAAWN--DEQHVRENRALYREKFAAVLEILGQV-LDLELP----DAGFY 327 (393)
T ss_pred -----------------hhccCcCHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCC----CeeEE
Confidence 0011233332233332332 12226777888899999999999875 334344 46678
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC--------CCcEEEEeecCCCCHHHHHHhhh
Q 017726 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV--------AGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+|++++ .+..++++.|.+++||.+.+|.... ..+++||++....+..+...+.|
T Consensus 328 ~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l 389 (393)
T TIGR03538 328 LWPKVP--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERI 389 (393)
T ss_pred EEEECC--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHH
Confidence 889886 4567899998777899999985421 23579999866433333333333
No 84
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=1.4e-29 Score=234.53 Aligned_cols=309 Identities=13% Similarity=0.078 Sum_probs=214.0
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.++++.+.+++.+.... ...|.......++|+.++++++.. ++++|++|+|+++++.+++.++.++||+|+++
T Consensus 68 ~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~ 147 (430)
T PLN00145 68 FRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLP 147 (430)
T ss_pred CCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 45677788887775432 223444456778999999998532 33569999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
.|.|+.+. ..+...|.+++.++.. .++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 148 ~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~ 221 (430)
T PLN00145 148 RPGYPLYE--ARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD----ENTVAMVIINPNNPCGSVYSYEHLAKIAETARK 221 (430)
T ss_pred CCCCccHH--HHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC----cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99877643 4567789999988864 356799999999887 46799999999999999998 6678888888
Q ss_pred cCCCcEEEEeeeeccCcee----ecc---ccccceEEEecCCCcccCCCc--ceeeee--CHHHHHHhccCCCCceeech
Q 017726 166 YRHPALFLVDGVSSICAID----FRM---DEWGIDVALTGSQKALSLPTG--MGIVCA--SPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~~---~~~~~d~~~~s~~K~~~g~~g--~g~~~~--~~~~~~~~~~~~~~~~~~~~ 234 (367)
+|++||+|++|...... .+. ......+++.|+||.+. .+| +|++++ ++.+++.....
T Consensus 222 --~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~pG~RlG~iv~~~~~~~~~~~~~~--------- 289 (430)
T PLN00145 222 --LGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWV-VPGWRLGWIATCDPNGILKETKVV--------- 289 (430)
T ss_pred --cCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccC-CCCeeEEEEEEecchhhhhhhHHH---------
Confidence 99999999998753321 111 11235689999999974 444 699987 33333221000
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccc-cCCCccCCCceEEEE
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC-TQKEEWFSDTVTAVI 312 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~ 312 (367)
....... .. ...++.....++..++..-.+.-+++.++.++++++.+.+.|++. |+.+. .| .++++++++
T Consensus 290 -~~~~~~~-~~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P----~ga~y~~v~ 361 (430)
T PLN00145 290 -DSIRNYL-NI--STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP----EGSMFVMVK 361 (430)
T ss_pred -HHHHHHh-cc--cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC----CeeeEEEec
Confidence 0000000 00 011333333333334432111226778889999999999999887 77643 34 466678888
Q ss_pred cCC----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 313 VPS----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 313 ~~~----~~-~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
++. +. +..++++.|.+++||.+.||..+...+++||++..
T Consensus 362 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~ 406 (430)
T PLN00145 362 LDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI 406 (430)
T ss_pred cChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC
Confidence 742 22 56678888888889999999665456899999764
No 85
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=232.56 Aligned_cols=301 Identities=12% Similarity=0.106 Sum_probs=208.8
Q ss_pred CChHHHHHHHccCCC-CCCCCc----HHHHHHHHHHHHHHHhcCC--CCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNE-DYRSPA----VPALTKTLLEDIKKIFKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~-~~~~~~----~~~~~~~~~~~la~~~~~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
++++.+.+++.+... ....|. .....+++.+.+++++|.+ +++++++|+|+++++..++.+++.+||+|+++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~ 121 (384)
T PRK12414 42 APDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFE 121 (384)
T ss_pred CCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeC
Confidence 346667777665322 122232 3444555555555666875 234699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
|.|..+. ..++..|.+++.++.+. ++.+|++.++++++ +++|+|++++|+||||.+++ +++|.++|++
T Consensus 122 p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~----~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~-- 193 (384)
T PRK12414 122 PSFDSYA--PIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT----PRTRMIIVNTPHNPSATVFSAADLARLAQLTRN-- 193 (384)
T ss_pred CCccchH--HHHHHcCCEEEEEecCccccccCHHHHHhhcC----cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 9876543 45677899999999874 56789999999987 46799999999999999975 6677888888
Q ss_pred CCcEEEEeeeeccCcee---e-cc---cc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 168 HPALFLVDGVSSICAID---F-RM---DE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~---~-~~---~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
+|+++++|++|...... . +. .. .+..+++.|+||.++ .+| +|++++++++++.+......
T Consensus 194 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~-~pGlRiG~~v~~~~l~~~l~~~~~~--------- 263 (384)
T PRK12414 194 TDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYH-VTGWRVGYCLAPAELMDEIRKVHQF--------- 263 (384)
T ss_pred CCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEeccccccc-CccceEEEEecCHHHHHHHHHHHhh---------
Confidence 99999999998743221 1 11 11 124699999999984 444 69999999998877643110
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC-
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS- 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
. .+..+.....++. ..+.+. ...+.++.++++++.+.+.|++.|+.+..+ .+++++|++++.
T Consensus 264 ------~---~~~~s~~~q~a~~---~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~gg~~~~~~~~~~ 327 (384)
T PRK12414 264 ------M---VFSADTPMQHAFA---EALAEPASYLGLGAFYQRKRDLLARELAGSRFELLPS----EGSFFMLARFRHF 327 (384)
T ss_pred ------e---ecCCCcHHHHHHH---HHhcCChHHHHHHHHHHHHHHHHHHHHHhCCCeecCC----CcceEEEEccccc
Confidence 0 1123333223333 333221 134567788899999999999988777665 466677777743
Q ss_pred -CCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecCC
Q 017726 316 -HINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLGH 353 (367)
Q Consensus 316 -~~~~~~l~~~L~~~~gv~v~~g~~~~----~~~~iRi~~~~~ 353 (367)
+.+..+++..+.+++||.+.+|..+. ..+++||++...
T Consensus 328 ~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~ 370 (384)
T PRK12414 328 SDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKD 370 (384)
T ss_pred CCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCC
Confidence 23456777666667799999985331 246899997653
No 86
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.5e-29 Score=229.21 Aligned_cols=280 Identities=16% Similarity=0.145 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCC
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (367)
..++++.+++++|++++ +|++++|+++++.+++.+++.+| |.|+++.|+|..+ ...++..|++++.++.+.++.+|
T Consensus 59 ~~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y--~~~~~~~G~~~~~v~~~~~~~~d 135 (351)
T PRK01688 59 PKAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMY--SVSAETIGVEIRTVPTLDNWQLD 135 (351)
T ss_pred hHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHH--HHHHHHcCCEEEEeecCCCCCCC
Confidence 46899999999999775 59999999999999999988887 8999998977653 35678899999999998778899
Q ss_pred HHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---c-cccccceEEEec
Q 017726 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---R-MDEWGIDVALTG 198 (367)
Q Consensus 123 ~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~-~~~~~~d~~~~s 198 (367)
++++++++. ++++|++|+||||||.+++.+++.++++....+++||+|++|....... + ....+.-+++.|
T Consensus 136 ~~~l~~~~~-----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 136 LPAIADNLD-----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred HHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 999998873 5699999999999999999888888887633468899999986543211 1 112235688999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh---ChHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE---GLEN 273 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~---g~~~ 273 (367)
+||.+ |.+| +|++++++++++.+..... ++..+... ..++...+.+. -+++
T Consensus 211 fSK~~-glaGlRiGy~i~~~~~i~~l~~~~~--------------------~~~v~~~~---~~~a~~~L~~~~~~~~~~ 266 (351)
T PRK01688 211 LSKAF-ALAGLRCGFTLANEEVINLLLKVIA--------------------PYPLSTPV---ADIAAQALSPQGIAAMRE 266 (351)
T ss_pred chHhh-cCHHHHHhHHhCCHHHHHHHHhccC--------------------CCCCCHHH---HHHHHHHHhcchHHHHHH
Confidence 99988 4666 5999999999888764321 23344322 22333333322 1556
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeec
Q 017726 274 VIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHL 351 (367)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~-~~~~~iRi~~~ 351 (367)
.++.+.++++++.+.|+++ ++..+.+ ....+++++++ +.+++.++|.+ +||.++.+... ...+++||++
T Consensus 267 ~~~~~~~~r~~l~~~L~~~~~~~~~~p----s~~nfi~~~~~---~~~~l~~~L~~-~gi~vr~~~~~~~~~~~iRis~- 337 (351)
T PRK01688 267 RVAEINANRQWLIAALKEIPCVEQVFD----SETNYILARFT---ASSAVFKSLWD-QGIILRDQNKQPGLSNCLRITI- 337 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeECC----CCCcEEEEEcC---CHHHHHHHHHH-CCeEEEECCCcCCCCCeEEEeC-
Confidence 6777788899999999988 6643333 23446777774 56889999975 59999865322 2356899995
Q ss_pred CCCCHHHHHHhhh
Q 017726 352 GHLNEVMFNFQLL 364 (367)
Q Consensus 352 ~~~~~~~~~~~~l 364 (367)
+..++.+.+..+|
T Consensus 338 ~~~~e~~~l~~al 350 (351)
T PRK01688 338 GTREECQRVIDAL 350 (351)
T ss_pred CCHHHHHHHHHhh
Confidence 4556666666554
No 87
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=2.6e-29 Score=232.49 Aligned_cols=325 Identities=17% Similarity=0.146 Sum_probs=226.7
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCC--------C---CCcHHHHHHH-HHHHHHHHhcCCCCceEEecCChhHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDY--------R---SPAVPALTKT-LLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~~~~~~~~-~~~~la~~~~~~~~~~v~~~~ggt~al~~ 75 (367)
.+.+++.|||..+++.|++++.+..... + +....+..++ .++.+++++|.+.. .++++||++|+..
T Consensus 19 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~sgt~a~~~ 96 (402)
T cd00378 19 RETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--NVQPHSGSQANLA 96 (402)
T ss_pred HhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--eeecCCcHHHHHH
Confidence 4678899999999999999998754211 1 1122233344 56678899998753 2444567899999
Q ss_pred HHHccCCCCCeEEEEeCCcchHHHH---HHHHHhCCceEEEeCCC---CCCCCHHHHHHHHhccCCCCccEEEEEecCCC
Q 017726 76 ALTNTLSPGDRIISFLIGQFSLLWI---DQQQRLNFNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETA 149 (367)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~---~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~ 149 (367)
++.+++.+||+|++.++.|.++... ..++..|.++..++.+. ++.+|++++++++.+ ++++++++++++|+
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~---~~~~~v~~~~~~~~ 173 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE---FKPKLIVAGASAYP 173 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh---CCCCEEEecCcccC
Confidence 9999999999999999987765311 12455787777776643 578999999999864 46799999888764
Q ss_pred ccccccHHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCCcceeeeeCH-HHHHHhc
Q 017726 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASP-KALEASK 223 (367)
Q Consensus 150 tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~-~~~~~~~ 223 (367)
...|+++|.++|++ +|+++++|++|..+.. +.+.. ++|++++|+||++.|++| |+++.++ ++.+++.
T Consensus 174 --~~~~~~~I~~l~~~--~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~ 246 (402)
T cd00378 174 --RPIDFKRFREIADE--VGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKKIN 246 (402)
T ss_pred --CCcCHHHHHHHHHh--cCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHH
Confidence 56799999999999 9999999999855432 22222 579999999999987776 6666665 7777765
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (367)
..... +. ..++....+.++..++....+.+.++.++++.++++++.+.|++.|+.+....
T Consensus 247 ~~~~~---------------~~--~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--- 306 (402)
T cd00378 247 SAVFP---------------GL--QGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGG--- 306 (402)
T ss_pred HHhCc---------------cc--cCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecC---
Confidence 32111 10 12344445556666666555434677888899999999999999988775321
Q ss_pred CCCceEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCCC------CCcEEEEeecCC------CCHHHHHHhhhh
Q 017726 304 FSDTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNKV------AGKVFRIGHLGH------LNEVMFNFQLLF 365 (367)
Q Consensus 304 ~~~~~~~~~~~~-~~~~~~l~~~L~~~~gv~v~~g~~~~------~~~~iRi~~~~~------~~~~~~~~~~l~ 365 (367)
..++++++++++ +.+...+.+.| +++||.+.+...+. .+..+|+++... .++.+...++|.
T Consensus 307 ~~~~~v~v~~~~~~~~~~~~~~~l-~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~ 380 (402)
T cd00378 307 TDNHLVLVDLRPKGITGKAAEDAL-EEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIA 380 (402)
T ss_pred CCCeEEEEeCCccCCCHHHHHHHH-HHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHH
Confidence 245678888853 44556677766 56699998643221 345799998652 344555555554
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-29 Score=230.39 Aligned_cols=311 Identities=13% Similarity=0.096 Sum_probs=221.9
Q ss_pred CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcch
Q 017726 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~ 96 (367)
+.+.++.+.+++.+......+|... ...++|+.++++++++++ +|++++|+++++..++.+++++||.|++.+|.|+.
T Consensus 43 ~~~~~~~~~~a~~~~~~~~~~Y~~~-~~~~Lr~~ia~~~~~~~~-~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~ 120 (369)
T PRK08153 43 GFGPSPSVIAAMREAAAEIWKYGDP-ENHDLRHALAAHHGVAPE-NIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPT 120 (369)
T ss_pred CCCCCHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchH
Confidence 5567788888887753321222212 257999999999998764 59999999999999999889999999999998776
Q ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+. ..++..|.+++.++.+.+ .+|++++++.+.+ ++++++++++|+||||.+++.+++.++++..+++++||+|+
T Consensus 121 ~~--~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~---~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE 194 (369)
T PRK08153 121 FN--YHVAGFGGRLVTVPYRDD-REDLDALLDAARR---ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDE 194 (369)
T ss_pred HH--HHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcc---cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 43 345668999999998655 4788888877653 46799999999999999999999999988744689999999
Q ss_pred eeccCcee---eccc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 177 VSSICAID---FRMD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 177 ~~~~~~~~---~~~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+|...... .... .....+++.|++|.++ .+| +|++++++++++.+..... .++
T Consensus 195 ~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g-~~GlRiG~~v~~~~~~~~l~~~~~--------------------~~~ 253 (369)
T PRK08153 195 AYCETAPAGAAPPIDTDDPNVIRMRTFSKAYG-LAGARVGYAIGAPGTIKAFDKVRN--------------------HFG 253 (369)
T ss_pred chhhhcCcccchhhhhcCCCEEEEecchHhcc-CcchheeeeecCHHHHHHHHHhhc--------------------CCC
Confidence 98643321 1111 1124588999999994 444 6999999998887764311 123
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC-CCCHHHHHHHHHhh
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRAWQR 329 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~ 329 (367)
.+...+.++.++++. ..-+++.++..+++++.+.+.|++.|+.+.++ .+++++++++. .....++.+.|.+
T Consensus 254 ~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p~-----~~~f~~~~~~~~~~~a~~l~~~l~~- 325 (369)
T PRK08153 254 MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLPS-----ATNFVAIDCGRDGAFARAVLDGLIA- 325 (369)
T ss_pred CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-----cCcEEEEECCCCcccHHHHHHHHHH-
Confidence 555444444444431 11166778888899999999999888765432 34467777642 3456788888875
Q ss_pred CCeEEc-cCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 330 YNLSLG-LGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 330 ~gv~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+||.++ ++... ...++||++. ..++.+.+.++|++
T Consensus 326 ~Gi~v~~p~~~~-~~~~iRis~~-~~~~~~~~~~al~~ 361 (369)
T PRK08153 326 RDIFVRMPGVAP-LDRCIRVSCG-PDEELDLFAEALPE 361 (369)
T ss_pred CCeEEeeCCCCC-CCCeEEEecC-CHHHHHHHHHHHHH
Confidence 499996 55432 2458999965 55566666666653
No 89
>PRK09148 aminotransferase; Validated
Probab=99.97 E-value=2.1e-29 Score=232.48 Aligned_cols=303 Identities=14% Similarity=0.116 Sum_probs=209.7
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
++++.+++++.+.... ...|.......++|+.+++++ |. +++++|++|+|+++++..++.+++.+||.|+++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~ 122 (405)
T PRK09148 43 PTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCP 122 (405)
T ss_pred CCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEc
Confidence 3467777777664321 123333344567888888877 44 233369999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhcC
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYR 167 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~~ 167 (367)
+|.|+.+. ..++..|+++..++.+.++. +++++++++.... ++++++++++|+||||.+++. ++|.++|++
T Consensus 123 ~P~y~~~~--~~~~~~g~~v~~v~~~~~~~-~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~-- 196 (405)
T PRK09148 123 NPSYPIHA--FGFIMAGGVIRSVPAEPDEE-FFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKK-- 196 (405)
T ss_pred CCCCcccH--HHHHhcCCEEEEEeCCCCCC-CccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 99887753 34567899999999875432 3455666655332 578999999999999999986 567888888
Q ss_pred CCcEEEEeeeeccCcee---e----cccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 168 HPALFLVDGVSSICAID---F----RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~---~----~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++++||+|++|...... . .... .+..+++.|+||.++ .+| +|++++++++++.+.....
T Consensus 197 ~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~-~pGlR~G~~v~~~~~i~~l~~~~~---------- 265 (405)
T PRK09148 197 HDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFS-MAGWRMGFAVGNERLIAALTRVKS---------- 265 (405)
T ss_pred cCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccC-CcchheeeeeCCHHHHHHHHHHHH----------
Confidence 99999999998743211 1 1111 124577899999984 444 7999999999887764210
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
+..++++.....++..++... +.-+++.++.++++++.+.+.|++.|+.+..+ .++.++|+++|...
T Consensus 266 --------~~~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p----~~g~f~~~~l~~~~ 332 (405)
T PRK09148 266 --------YLDYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP----AASMFAWAPIPEAF 332 (405)
T ss_pred --------HhccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC----CeeEEEEEECCCcc
Confidence 001123332222333333211 11267778889999999999999988766555 46667888886432
Q ss_pred ---CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeec
Q 017726 318 ---NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHL 351 (367)
Q Consensus 318 ---~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~ 351 (367)
+..++++.|.++.||.+.+|..+ ..++++||++.
T Consensus 333 ~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~ 371 (405)
T PRK09148 333 RHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV 371 (405)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec
Confidence 45788888877779999998543 22468999974
No 90
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.97 E-value=4.7e-29 Score=234.64 Aligned_cols=308 Identities=11% Similarity=0.018 Sum_probs=212.4
Q ss_pred CCCCChHHHHHHHccCCC----CCCCCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccC-CCCC
Q 017726 16 GPVHIPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTL-SPGD 85 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~-~~gd 85 (367)
++...|..+++++.+... ....|....+..++|+.++++++ .+ .+++|++|+|+++++..++.+++ ++||
T Consensus 85 ~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD 164 (481)
T PTZ00377 85 VSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSD 164 (481)
T ss_pred ccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCC
Confidence 444556777877764221 12235445667789999998875 22 34569999999999999999988 7999
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccC--CCCccEEEEEecCCCcccccc---HHH
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNN---LSK 158 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~~---~~~ 158 (367)
.|+++.|.|+.+. ..++..|.+++.++++++ +.+|++++++++++.. ..++|++++++|+||||.+++ +++
T Consensus 165 ~Vlv~~P~y~~y~--~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~ 242 (481)
T PTZ00377 165 GVMIPIPQYPLYS--AAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEE 242 (481)
T ss_pred EEEECCCCchhHH--HHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHH
Confidence 9999999877643 556788999999998743 5789999999987410 026899999999999999998 777
Q ss_pred HHHHHHhcCCCcEEEEeeeeccCce----ee-c-------cccc----cceEEEecCCCcccCCCc--ceeeee---CHH
Q 017726 159 VRKLLDEYRHPALFLVDGVSSICAI----DF-R-------MDEW----GIDVALTGSQKALSLPTG--MGIVCA---SPK 217 (367)
Q Consensus 159 i~~~~~~~~~~~~vi~D~~~~~~~~----~~-~-------~~~~----~~d~~~~s~~K~~~g~~g--~g~~~~---~~~ 217 (367)
|.++|++ ++++||+|++|..... ++ + +... ..-+++.|+||.+.+.+| +|++++ +++
T Consensus 243 i~~~a~~--~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~ 320 (481)
T PTZ00377 243 IIKFCYE--KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPE 320 (481)
T ss_pred HHHHHHH--CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHH
Confidence 8888988 9999999999874322 11 1 1110 124778899998655445 699986 888
Q ss_pred HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHH----------HHHhChHHHHHHHHHHHHHHHH
Q 017726 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL----------IFEEGLENVIERHRRLGKATRL 287 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~----------~~~~g~~~~~~~~~~~~~~l~~ 287 (367)
+++++..... . .+.++.....++..++.. +.++ +++..+.++++++.+.+
T Consensus 321 li~~l~~~~~-----------------~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~rr~~l~~ 380 (481)
T PTZ00377 321 VREQIYKLAS-----------------I--NLCSNVVGQLMTGLMCNPPREGDASYPLYKRE-RDAIFTSLKRRAELLTD 380 (481)
T ss_pred HHHHHHHHhh-----------------e--ecCCChHHHHHHHHHhCCCCCCcccHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 8887764321 0 112444333444444421 1111 33444557888999999
Q ss_pred HHHHc-CCccccCCCccCCCceEEEEcC--CCC----------CHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeec
Q 017726 288 AVEAW-GLKNCTQKEEWFSDTVTAVIVP--SHI----------NSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHL 351 (367)
Q Consensus 288 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~--~~~----------~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~ 351 (367)
.|+++ |+.+..+ .+++++|++++ .+. +..+++..+.+++||.+.||..+. ..++||+++.
T Consensus 381 ~L~~~~g~~~~~p----~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~ 456 (481)
T PTZ00377 381 ELNKIEGVSCQPV----EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL 456 (481)
T ss_pred HHhcCCCcEeecC----CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC
Confidence 99987 8888776 45666776542 111 234566677777899999986543 2358999976
No 91
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.97 E-value=3.4e-29 Score=231.26 Aligned_cols=303 Identities=13% Similarity=0.052 Sum_probs=213.5
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhc-----CCCCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK-----TTSGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~-----~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.++++.+.+++.+.... ..+|.......++|+.++++++ +++ ++|++|+|+++++.+++.+++.+||.|+++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~v~i~ 125 (401)
T TIGR01264 47 LPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEA-DDVVLCSGCSHAIEMCIAALANAGQNILVP 125 (401)
T ss_pred CCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCH-HHEEECcChHHHHHHHHHHhCCCCCEEEEe
Confidence 46788888888764332 2234344556789999999987 333 459999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
.|.|..+ ...++..|+++..++++. ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|++
T Consensus 126 ~P~y~~~--~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~ 199 (401)
T TIGR01264 126 RPGFPLY--ETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE----KTAALIVNNPSNPCGSVFSRQHLEEILAVAER 199 (401)
T ss_pred CCCChhH--HHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc----CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9976543 356788999999988753 467999999998873 5699999999999999986 6678888888
Q ss_pred cCCCcEEEEeeeeccCcee----ec---cccccceEEEecCCCcccCCCc--ceeeeeCH------HHHHHhccCCCCce
Q 017726 166 YRHPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALSLPTG--MGIVCASP------KALEASKTAKSVRV 230 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~------~~~~~~~~~~~~~~ 230 (367)
+|++|++|++|...... .+ .......+++.|+||.+. .+| +|++++++ +.++.+...
T Consensus 200 --~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~~GlRiG~iv~~~~~~~~~~~~~~~~~~----- 271 (401)
T TIGR01264 200 --QCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWL-VPGWRLGWIIIHDRRGILRDIRDGLVKL----- 271 (401)
T ss_pred --CCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCC-CccceEEEEEecCcchhHHHHHHHHHHH-----
Confidence 99999999998743211 11 111112578899999863 444 69999874 233332211
Q ss_pred eechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceE
Q 017726 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 309 (367)
. .. .+.++.....++..++....+.-+++.++.++++++.+.+.|+++ |+.+..| .+++++
T Consensus 272 -----------~-~~--~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~ 333 (401)
T TIGR01264 272 -----------S-QR--ILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP----SGAMYM 333 (401)
T ss_pred -----------h-hc--cCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC----CeeeEE
Confidence 0 00 112333333333334432111227778888999999999999998 7665555 466778
Q ss_pred EEEcCC-----CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCC
Q 017726 310 AVIVPS-----HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 353 (367)
Q Consensus 310 ~~~~~~-----~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~ 353 (367)
|++++. ..+..++++.|.+++||.+.+|..+..++++||++...
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~ 382 (401)
T TIGR01264 334 MVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVP 382 (401)
T ss_pred EEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCC
Confidence 888632 23567899988777799999986544467899997544
No 92
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=3.1e-29 Score=227.76 Aligned_cols=305 Identities=11% Similarity=0.065 Sum_probs=211.1
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++|+.+++++.+.......|.. ....++|+.++++++++++ +|++++|+++++..++.++ .+|+ +++..|.|.
T Consensus 30 ~~~~~p~~~~~a~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~ 105 (356)
T PRK08056 30 NPLGMPVSLKRAIIDNLDCAERYPD-VEYRHLHQALARHHQVPAS-WILAGNGETESIFAVVSGL-KPRR-AMIVTPGFA 105 (356)
T ss_pred CCCCCCHHHHHHHHHHHHhcccCcC-ccHHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCCC-EEEeCCCcH
Confidence 4567888899988764332222222 2368999999999998764 5999999999999888875 6775 677777655
Q ss_pred hHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCc
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPA 170 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~ 170 (367)
.+ ...++..|.+++.++.+.+ +.+| +++++.+. +++|+|++++|+||||.+++ +++|.++|++ +++
T Consensus 106 ~~--~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~----~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~--~~~ 176 (356)
T PRK08056 106 EY--RRALQQVGCEIRRYSLREADGWQLT-DAILEALT----PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKS--LNI 176 (356)
T ss_pred HH--HHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc----CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHh--cCC
Confidence 43 3567889999999998643 3444 35555554 47799999999999999998 6778888888 999
Q ss_pred EEEEeeeeccCcee----ec-cccccceEEEecCCCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhh
Q 017726 171 LFLVDGVSSICAID----FR-MDEWGIDVALTGSQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 171 ~vi~D~~~~~~~~~----~~-~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+||+|++|...... .+ ......++++.|+||+++ .+| +|+++++ +++++++....
T Consensus 177 ~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~~~~~~l~~~~---------------- 239 (356)
T PRK08056 177 ALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYA-IPGLRLGYLVNSDDAAVARMRRQQ---------------- 239 (356)
T ss_pred EEEEecchhccCCcchHHHHHhccCCCEEEEEechhhcc-CcchhheeeecCCHHHHHHHHHhC----------------
Confidence 99999997543211 11 222346799999999995 444 6999984 56666665321
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHH
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSS 320 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (367)
. +++.+.....+...++ .... .++.+++++++++.+.+.|+++ ++.+..+ .+++++++++. +..
T Consensus 240 -~---~~~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~--~~~ 305 (356)
T PRK08056 240 -M---PWSINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG-----RANYLFLRCER--PDI 305 (356)
T ss_pred -C---CCchhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-----CCcEEEEEcCC--ChH
Confidence 0 2234443323333333 2211 5566788899999999999887 7665543 34567787752 457
Q ss_pred HHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 321 EIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 321 ~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
++++.|.+ +||.+++|... ..++++||++ +..++.+.+.++|.+
T Consensus 306 ~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~-~~~~~~~~l~~~l~~ 351 (356)
T PRK08056 306 DLQRALLT-QRILIRSCANYPGLDSRYYRVAI-RSAAENERLLAALRN 351 (356)
T ss_pred HHHHHHHH-CCeEEEECCCCCCCCCCEEEEEE-cCHHHHHHHHHHHHH
Confidence 89999975 59999988543 2346899995 455666666666654
No 93
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.4e-29 Score=228.37 Aligned_cols=315 Identities=16% Similarity=0.106 Sum_probs=220.0
Q ss_pred CCCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
.+.+.++.+.+++.+.... ...|.......++|+.+++++|.++. ++++++|+++++..++.+++.+||.|++++|.
T Consensus 38 ~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~-~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~ 116 (380)
T PRK06225 38 NHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDD-EALITAGATESLYLVMRAFLSPGDNAVTPDPG 116 (380)
T ss_pred CCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 3446678888888775432 12333345578999999999998765 59999999999999999989999999999997
Q ss_pred cchHHHHHHHHHhCCceEEEeCCC---CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~---~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
|+.. ...++..|.+++.++++. ++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 117 y~~~--~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~-- 188 (380)
T PRK06225 117 YLII--DNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD----ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARD-- 188 (380)
T ss_pred Ccch--HHHHHHhCceEEeeccccccCCccCCHHHHHhhcC----CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 7653 355678899999998742 35789999999987 46799999999999999886 7778888888
Q ss_pred CCcEEEEeeeeccCc---eeeccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 168 HPALFLVDGVSSICA---IDFRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~---~~~~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+|+++|+|+++.... ...........+++.|++|++ |++| +|++++++++++.+.....
T Consensus 189 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RiG~i~~~~~l~~~~~~~~~--------------- 252 (380)
T PRK06225 189 NDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIF-GMAGLRIGAVVATPDLIEVVKSIVI--------------- 252 (380)
T ss_pred CCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhc-CCccceeEEEecCHHHHHHHHHHHh---------------
Confidence 999999999874211 111101124568888999999 5556 6999999999887664210
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccc-cCCCccCCCceEEEEcCC-CCCH
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNC-TQKEEWFSDTVTAVIVPS-HINS 319 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 319 (367)
+ .+..+.....+...++....+. ++++++.++++.+.+.+.|+++ |+.+. .+ ..+.++++.++. +.+.
T Consensus 253 -~---~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~ 323 (380)
T PRK06225 253 -N---DLGTNVIAQEAAIAGLKVKDEW-IDRIRRTTFKNQKLIKEAVDEIEGVFLPVYP----SHGNMMVIDISEAGIDP 323 (380)
T ss_pred -c---ccCCCHHHHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCcCCccccCC----CCCeEEEEEcccccCCH
Confidence 1 1123333333333344332222 4566677778888899999885 64332 22 234467787743 4678
Q ss_pred HHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 320 SEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
.++.+.|. ++||.+++|... ...+++|+++....++.+...+.|.
T Consensus 324 ~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~ 371 (380)
T PRK06225 324 EDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFP 371 (380)
T ss_pred HHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHH
Confidence 89999997 559999998432 1235799997654344444444443
No 94
>PRK07777 aminotransferase; Validated
Probab=99.97 E-value=3e-29 Score=230.64 Aligned_cols=300 Identities=15% Similarity=0.104 Sum_probs=208.7
Q ss_pred hHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHH----hcCC--CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 21 PDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKI----FKTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 21 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~----~~~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
++.+++++.+.... ...|.......++|+.++++ +|.+ ++++|++|+|+++++..++.+++.+||+|++..|.
T Consensus 39 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~ 118 (387)
T PRK07777 39 PPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPY 118 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 44556655543221 22233234455677777665 5654 32359999999999999999889999999999997
Q ss_pred cchHHHHHHHHHhCCceEEEeCCCC---CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDWG---EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~~---~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
|..+ ...++..|.+++.++.+++ +.+|++++++++. +++++|++++|+||||.+++ +++|.++|++
T Consensus 119 y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~-- 190 (387)
T PRK07777 119 YDSY--AAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT----PRTRALIVNSPHNPTGTVLTAAELAAIAELAVE-- 190 (387)
T ss_pred chhh--HHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC----cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHh--
Confidence 6654 3556778999999988653 4689999999887 46799999999999999986 7778899999
Q ss_pred CCcEEEEeeeeccCce------eec-cc-cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 168 HPALFLVDGVSSICAI------DFR-MD-EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~------~~~-~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
+++++|+|++|..... ++. .. ..+.++++.|+||.++ .+| +|++++++++++.+......
T Consensus 191 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~GlRiG~~~~~~~l~~~~~~~~~~--------- 260 (387)
T PRK07777 191 HDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFN-VTGWKIGWACGPAPLIAAVRAAKQY--------- 260 (387)
T ss_pred cCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhcc-CcCceeEEEecCHHHHHHHHHHHhh---------
Confidence 9999999999864321 111 11 1246899999999995 445 69999999988776532110
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC--
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-- 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-- 315 (367)
. .+..+.....++..++....+. ++++++.+.++++.+.+.|++.|+++..+ .+++++|++++.
T Consensus 261 ------~---~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~g~~~~~~~~~~~~ 326 (387)
T PRK07777 261 ------L---TYVGGAPFQPAVAHALDHEDAW-VAALRDSLQAKRDRLAAGLAEAGFEVHDS----AGTYFLCADPRPLG 326 (387)
T ss_pred ------c---ccCCCCHHHHHHHHHHhCCcHH-HHHHHHHHHHHHHHHHHHHHhCCCCccCC----CcceEEEecccccC
Confidence 0 1112222222333333221111 56778889999999999999988777765 456677777632
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC-----CCcEEEEeecC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV-----AGKVFRIGHLG 352 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~-----~~~~iRi~~~~ 352 (367)
..+..++++.|.+++||.+.+|..+. ...++||++..
T Consensus 327 ~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~ 368 (387)
T PRK07777 327 YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK 368 (387)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC
Confidence 23678999999877899999984321 13579999754
No 95
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=9.1e-29 Score=224.84 Aligned_cols=326 Identities=14% Similarity=0.117 Sum_probs=232.1
Q ss_pred CCCCCCCcccccCCCCCChHHHHHHHccCCCCCCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHH
Q 017726 3 YMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78 (367)
Q Consensus 3 ~~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~ 78 (367)
|.++-++.|+-.+.++.+-+.+.+++.+....+.+ ....+..+++++.++++++.+. .+++++|++++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~---~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA---ALVFSSGYAANDGVLS 79 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC---EEEeccHHHHHHHHHH
Confidence 45566777777777766666666666543322222 1345778899999999999753 4556777889988888
Q ss_pred ccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC-CCCccEEEEEecCCCccccccHH
Q 017726 79 NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-AHTIKAICIVHNETATGVTNNLS 157 (367)
Q Consensus 79 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~-~~~~~lv~~~~~~n~tG~~~~~~ 157 (367)
+++.+||.|+++.+.|++.. ..++..|++++.++. +|.+++++++++.. .++++++++++++||||.+.|++
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~--~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~ 152 (349)
T cd06454 80 TLAGKGDLIISDSLNHASII--DGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLP 152 (349)
T ss_pred HhcCCCCEEEEehhhhHHHH--HHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHH
Confidence 88899999999988776643 345678998887753 47888998887531 13578999999999999999999
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCcee--------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAID--------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~--------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
+|.++|++ +|+++|+|++|+.+... .+....+.|++++|+||+++ ++| |+++.++++.+++......
T Consensus 153 ~i~~~~~~--~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~g-G~i~~~~~~~~~~~~~~~~- 227 (349)
T cd06454 153 ELVDLAKK--YGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVG-GYIAGSKELIDYLRSYARG- 227 (349)
T ss_pred HHHHHHHH--cCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccC-CEEECCHHHHHHHHHhchh-
Confidence 99999999 99999999999865442 12233468999999999995 565 8888898887766532110
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceE
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (367)
+.. .++.+...++++.++++.+.+ .+.+++++.++++++.+.|+++|+++..+ ..+.+.
T Consensus 228 -----------~~~----~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~----~~~~~~ 286 (349)
T cd06454 228 -----------FIF----STSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGS----PSHIIP 286 (349)
T ss_pred -----------hhc----cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCC----CCCcEE
Confidence 000 113555666777778877655 46678899999999999999988776654 233344
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHHH--HHHhhhh
Q 017726 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEVM--FNFQLLF 365 (367)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~~--~~~~~l~ 365 (367)
++..+++.+..++.+.|.++ ||.+.++... ..+.++|+++....+.++ ....+|+
T Consensus 287 ~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 346 (349)
T cd06454 287 PLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALK 346 (349)
T ss_pred EEeCCChHHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 45444345678899999876 9999864221 124689999876666544 4444443
No 96
>PRK07683 aminotransferase A; Validated
Probab=99.97 E-value=5e-29 Score=228.84 Aligned_cols=300 Identities=15% Similarity=0.122 Sum_probs=211.9
Q ss_pred CChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cC--CCCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KT--TSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~--~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
+.++.+.+++.+.... ...|.......++|+.+++++ |. +++.+|++|+|+++|+.+++.+++.+||.|+++.
T Consensus 41 ~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~ 120 (387)
T PRK07683 41 PTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPA 120 (387)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcC
Confidence 3456667777664432 223333345678888888887 33 3332699999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
|.|..+. ..++..|++++.++.+. ++.+|.+++++.++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 121 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~-- 192 (387)
T PRK07683 121 PIYPGYE--PIIRLCGAKPVFIDTRSTGFRLTAEALENAIT----EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKD-- 192 (387)
T ss_pred CCccchH--HHHHHcCCEEEEeecCcccCCCCHHHHHHhcC----cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 9766543 44677899999999864 45678899999887 46799999999999999986 6778888888
Q ss_pred CCcEEEEeeeeccCcee---eccc----cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 168 HPALFLVDGVSSICAID---FRMD----EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~---~~~~----~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+|+++|+|++|...... .+.. ..+..+++.|++|.++ .+| +|++++++++++++.....
T Consensus 193 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~-~pGlRiG~i~~~~~l~~~~~~~~~----------- 260 (387)
T PRK07683 193 KNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHS-MTGWRIGFLFAPSYLAKHILKVHQ----------- 260 (387)
T ss_pred cCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeecccccc-CccceeEEEEcCHHHHHHHHHHHH-----------
Confidence 99999999998754321 1111 1235688999999995 344 6999999998887764210
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC-
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFE--EGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS- 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~--~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
+. ...++.. ++.++...+.+ ..+++.++++.++++.+.+.|++.|+.+..+ .++++++..++.
T Consensus 261 --~~-----~~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~ 326 (387)
T PRK07683 261 --YN-----VTCASSI---SQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP----TGAFYLFPSIGHF 326 (387)
T ss_pred --hc-----cCCCChH---HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CeeEEEEEecccC
Confidence 00 1112222 22333333322 1156677888899999999998888777665 455566666653
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLG 352 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~--~~~~~~iRi~~~~ 352 (367)
+.+..++++.+.+++||.+.+|.. ...++++||++..
T Consensus 327 ~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~ 365 (387)
T PRK07683 327 TMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY 365 (387)
T ss_pred CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC
Confidence 456778887766777999999854 3335789999754
No 97
>PRK07908 hypothetical protein; Provisional
Probab=99.97 E-value=6.5e-29 Score=225.23 Aligned_cols=304 Identities=13% Similarity=0.046 Sum_probs=213.9
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++|+.+++++.+.......|.......++|+.++++++++++ +|++|+|+++++.+++. +.+| .+++..|.|.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~-~I~it~Ga~~al~~~~~--l~~~-~viv~~P~y~ 107 (349)
T PRK07908 32 RHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPD-EVLLLAGAAEGFALLAR--LRPR-RAAVVHPSFT 107 (349)
T ss_pred CCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHh--cCCC-eEEEeCCCCh
Confidence 345678888888887544333343335577899999999998764 59999999999998887 5665 5666777655
Q ss_pred hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
.. + ..++..|.+++.++++.++.+|++.+ + ++++++++++|+||||.+++.++|.++|+ +++++|+|
T Consensus 108 ~~-~-~~~~~~G~~i~~v~~~~~~~~d~~~l----~----~~~~~i~l~np~NPTG~~~~~~~l~~l~~---~~~~iIvD 174 (349)
T PRK07908 108 EP-E-AALRAAGIPVHRVVLDPPFRLDPAAV----P----DDADLVVIGNPTNPTSVLHPAEQLLALRR---PGRILVVD 174 (349)
T ss_pred HH-H-HHHHHcCCEEEeeccCcccCcChhHh----c----cCCCEEEEcCCCCCCCCCcCHHHHHHHHh---cCCEEEEE
Confidence 43 3 56778999999999987677888754 3 36789999999999999999999999985 46788889
Q ss_pred eeeccCc--eeeccc--cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCC
Q 017726 176 GVSSICA--IDFRMD--EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249 (367)
Q Consensus 176 ~~~~~~~--~~~~~~--~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (367)
++|+... ...++. ..+..+++.|+||.++ ++| +|++++++++++++..... .+
T Consensus 175 e~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~-l~GlRiG~~~~~~~~~~~~~~~~~--------------------~~ 233 (349)
T PRK07908 175 EAFADAVPGEPESLAGDDLPGVLVLRSLTKTWS-LAGLRVGYALGAPDVLARLTRGRA--------------------HW 233 (349)
T ss_pred CcchhhccCCccccccccCCCEEEEeecccccC-CccceeeeeecCHHHHHHHHhcCC--------------------CC
Confidence 9986321 111211 1234577779999884 444 6999999999888765321 11
Q ss_pred CCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhh
Q 017726 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329 (367)
Q Consensus 250 ~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 329 (367)
..+.....++.+.+.......++++++++.++++++.+.|+++|+++..+ ..+.++++++++ .+++.+.|. +
T Consensus 234 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p----~~g~~~~~~~~~---~~~~~~~l~-~ 305 (349)
T PRK07908 234 PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP----AAAPFVLVRVPD---AELLRKRLR-E 305 (349)
T ss_pred CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC----CCceEEEEECCc---HHHHHHHHH-h
Confidence 23333333333332210111156778889999999999999888777665 356678888853 567777775 5
Q ss_pred CCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 330 YNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 330 ~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
+||.+.+|... ...++|||++ +..++.+.+.+.|++
T Consensus 306 ~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~ 343 (349)
T PRK07908 306 RGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAE 343 (349)
T ss_pred CCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHH
Confidence 69999998543 2357899997 566667777766654
No 98
>PRK09082 methionine aminotransferase; Validated
Probab=99.97 E-value=6.1e-29 Score=228.27 Aligned_cols=301 Identities=13% Similarity=0.069 Sum_probs=213.4
Q ss_pred ChHHHHHHHccCCCC-CCCC----cHHHHHHHHHHHHHHHhcCCC--CceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNED-YRSP----AVPALTKTLLEDIKKIFKTTS--GTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~----~~~~~~~~~~~~la~~~~~~~--~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.++.+.+++.+.... ...| +.....+.+.+.+.+.++.+. ++++++|+|+++++..++.+++.+||+|++..|
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p 123 (386)
T PRK09082 44 GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDP 123 (386)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 356667766653221 1122 233444555555555667642 235999999999999999998999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc---cHHHHHHHHHhcCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN---NLSKVRKLLDEYRH 168 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~---~~~~i~~~~~~~~~ 168 (367)
.|.+.. ..++..|.+++.++.+. ++.+|+++++++++ ++++++++++|+||||.++ ++++|.++|++ +
T Consensus 124 ~y~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~--~ 195 (386)
T PRK09082 124 SYDSYA--PAIELAGGRAVRVALQPPDFRVDWQRFAAAIS----PRTRLIILNTPHNPSGTVWSAADMRALWQLIAG--T 195 (386)
T ss_pred CchhhH--HHHHHcCCEEEEEecCcccccCCHHHHHHhcC----ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH--C
Confidence 777643 45677899999999863 56789999999987 4679999999999999886 46778999999 9
Q ss_pred CcEEEEeeeeccCcee----e---cccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 169 PALFLVDGVSSICAID----F---RMDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~~----~---~~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
++++|+|++|...... . .... .+..+++.|+||.++ .+| +|++++++++++.+.....
T Consensus 196 ~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~iv~~~~l~~~~~~~~~----------- 263 (386)
T PRK09082 196 DIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH-VTGWKVGYCVAPAALSAEFRKVHQ----------- 263 (386)
T ss_pred CEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc-chhhhhhhhhCCHHHHHHHHHHHh-----------
Confidence 9999999998643221 1 1111 245789999999984 444 6999999999887764311
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC--C
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--H 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--~ 316 (367)
. ..++++.....++...+... +.-++++++.++++++.+.+.|++.|+++..+ .++.++|+++++ +
T Consensus 264 -----~--~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~----~g~~~~~~~~~~~~~ 331 (386)
T PRK09082 264 -----Y--NTFTVNTPAQLALADYLRAE-PEHYLELPAFYQAKRDRFRAALANSRFKLLPC----EGTYFQLVDYSAISD 331 (386)
T ss_pred -----h--hcCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----CeeEEEEEeccccCC
Confidence 0 01224443333333333211 12266778888999999999999988877665 466778888863 5
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCC----CCCcEEEEeecC
Q 017726 317 INSSEIVRRAWQRYNLSLGLGLNK----VAGKVFRIGHLG 352 (367)
Q Consensus 317 ~~~~~l~~~L~~~~gv~v~~g~~~----~~~~~iRi~~~~ 352 (367)
.+..++++.|.+++||.+.+|..+ ...+++||++..
T Consensus 332 ~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~ 371 (386)
T PRK09082 332 LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK 371 (386)
T ss_pred CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC
Confidence 678899999877889999998432 234689999754
No 99
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.97 E-value=2.5e-29 Score=229.40 Aligned_cols=313 Identities=13% Similarity=0.107 Sum_probs=219.1
Q ss_pred CcccccCC--CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEe-cCChhHHHHHHHHccCCCCC
Q 017726 9 KNHLFVPG--PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLI-PTTGTGAWESALTNTLSPGD 85 (367)
Q Consensus 9 ~~~~~~~~--p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~-~~ggt~al~~~~~~~~~~gd 85 (367)
+.+.+.-+ |.++++.+++++.+.......|.. ....++|+.+++++++++++ +++ ++|+++++..++.+++.+||
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~~~~~~~-i~~~~~Ga~~~i~~~~~~~~~~gd 112 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPE-PDAPELREALSKYTGVPVEN-IIVGGDGMDEVIDTLMRTFIDPGD 112 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHhCCCHHH-EEEeCCCHHHHHHHHHHHhcCCCC
Confidence 34455433 456677788887764433222211 12378999999999987654 777 67777888888888889999
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
.|+++.|.|... ...++..|++++.++.+.++.+|++++++.++ ++++++++++|+||||.++|.+++.++|++
T Consensus 113 ~vlv~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~~~~p~nptG~~~~~~~l~~l~~~ 186 (361)
T PRK00950 113 EVIIPTPTFSYY--EISAKAHGAKPVYAKREEDFSLDVDSVLNAIT----EKTKVIFLCTPNNPTGNLIPEEDIRKILES 186 (361)
T ss_pred EEEEcCCChHHH--HHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc----cCCCEEEEeCCCCCCCCCcCHHHHHHHHHH
Confidence 999999865543 34577889999999977777899999999886 467999999999999999999999999999
Q ss_pred cCCCcEEEEeeeeccCce-ee-c-cccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHH
Q 017726 166 YRHPALFLVDGVSSICAI-DF-R-MDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKF 240 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~-~~-~-~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
+|+++++|++|..... .. . ....+..+++.|++|.++ .+| +|++++++++++.+.....
T Consensus 187 --~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~~~~~~~~~~~~~~~~------------- 250 (361)
T PRK00950 187 --TDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFG-LAGLRIGYGFVPEWLIDYYMRAKT------------- 250 (361)
T ss_pred --CCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhc-CchhhcchhcCCHHHHHHHHHhcC-------------
Confidence 8999999999964331 01 1 111234578889999984 555 6999999998877764311
Q ss_pred hhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCH
Q 017726 241 YNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINS 319 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (367)
++..+.. ++..+...+.+.+ +++.+++.+++++++.+.|. +.+..+ .+.++++++ ++.+.
T Consensus 251 -------~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~~-----~~~~i~~~~-~~~~~ 311 (361)
T PRK00950 251 -------PFSLTRL---SQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP---FKVYPS-----EANFVLVDV-TPMTA 311 (361)
T ss_pred -------CCCCCHH---HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC---eeECCC-----cceEEEEEC-CCCCH
Confidence 1223332 2333344443333 56666667777777766654 444332 345778888 56688
Q ss_pred HHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 320 SEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
.++++.|.+ +||.+++|... ..+.++|+++. ..++.+...++|++
T Consensus 312 ~~~~~~l~~-~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~ 358 (361)
T PRK00950 312 KEFCEELLK-RGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKE 358 (361)
T ss_pred HHHHHHHHH-CCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHH
Confidence 999999975 59999987542 23468999965 44556666666654
No 100
>PRK07550 hypothetical protein; Provisional
Probab=99.97 E-value=5.9e-29 Score=228.61 Aligned_cols=302 Identities=16% Similarity=0.065 Sum_probs=212.4
Q ss_pred CChHHHHHHHccCCC--CCCCCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
+.++.+.+++.+... ....|.......++|+.++++++ .. .+++|++|+|+++++..++.+++.+||+|+++.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~ 121 (386)
T PRK07550 42 PPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPL 121 (386)
T ss_pred CCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcC
Confidence 346667777665321 12223322445677777777664 32 335699999999999999999899999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
|.|+... ..++..|.+++.++.++ ++.+|+++++++++ +++++|++++|+||||.+++ +++|.++|++
T Consensus 122 p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~----~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~- 194 (386)
T PRK07550 122 PWYFNHK--MWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT----PRTRAIALVTPNNPTGVVYPPELLHELYDLARR- 194 (386)
T ss_pred CCCcchH--HHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc----ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHH-
Confidence 9776643 45678999999999864 34679999999997 46799999999999999987 6778899998
Q ss_pred CCCcEEEEeeeeccCce----eecc-c---cccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 167 RHPALFLVDGVSSICAI----DFRM-D---EWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~----~~~~-~---~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
+|++||+|++|+.... +... . .....+++.|++|.++ ...++|++++++++++++......
T Consensus 195 -~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~--------- 264 (386)
T PRK07550 195 -HGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDT--------- 264 (386)
T ss_pred -cCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhh---------
Confidence 9999999999864321 1111 0 1123577899999985 223479999999888776642110
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS- 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
. ...++.....++..++..+.+. +++.++.+.++++.+.+.|++. ++.+.. ..++++|++++.
T Consensus 265 ------~---~~~~s~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~g~~~~~~~~~~~ 329 (386)
T PRK07550 265 ------V---AICAPRIGQIAVAWGLPNLADW-RAGNRAEIARRRDAFRAVFARLPGWELLA-----SGAYFAYVRHPFP 329 (386)
T ss_pred ------c---ccCCCcHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHHHHHHhCCCceeCC-----CceEEEEecCCCC
Confidence 0 1123343334444455443332 5666778888999999999986 655432 355678888865
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
+.+..+++++|.+++||.+.+|..+ ..+.++||++..
T Consensus 330 ~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~ 368 (386)
T PRK07550 330 DRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN 368 (386)
T ss_pred CCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec
Confidence 6788999999877789999998433 235689999754
No 101
>PRK08363 alanine aminotransferase; Validated
Probab=99.97 E-value=5.7e-29 Score=229.53 Aligned_cols=307 Identities=14% Similarity=0.086 Sum_probs=209.4
Q ss_pred CChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
++++.+.+++.+.... ...|.......++|+.++++++ .. ++++|++|+|+++++..++.+++++||.|+++.|
T Consensus 46 ~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p 125 (398)
T PRK08363 46 QPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGP 125 (398)
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 5677788887764322 2233334556788888888873 22 3356999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEE-eCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVV-ESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
.|.... ..++..|.+++.+ +.++ ++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 126 ~y~~~~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~-- 197 (398)
T PRK08363 126 SYPPYT--GLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT----EKTKAIAVINPNNPTGALYEKKTLKEILDIAGE-- 197 (398)
T ss_pred CCcchH--HHHHHcCCEEEEeccccccCCcCCHHHHHhhCC----cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 877653 4567788888877 4443 35689999999887 46799999999999999997 7788888988
Q ss_pred CCcEEEEeeeeccCcee------eccccccceEEEecCCCccc-CCCcceeeee--CHHHHHHhccCCCCceeechHHHH
Q 017726 168 HPALFLVDGVSSICAID------FRMDEWGIDVALTGSQKALS-LPTGMGIVCA--SPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~------~~~~~~~~d~~~~s~~K~~~-g~~g~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+|+++|+|++|...... .........+++.|+||.+. .+.++|++++ ++++++.+.....
T Consensus 198 ~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~----------- 266 (398)
T PRK08363 198 HDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAID----------- 266 (398)
T ss_pred cCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHH-----------
Confidence 99999999998743221 01111123577889999963 2344799997 6666655542210
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCC-
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (367)
.+... .+.++.....++..++... ..-+++.++++.++++.+.+.|+++ ++.+..+ .+++++|++++..
T Consensus 267 -~~~~~---~~~~s~~~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~~~~ 337 (398)
T PRK08363 267 -KLARI---RLCPNTPAQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTTKP----QGAFYIFPRIEEGP 337 (398)
T ss_pred -HHhcc---cccCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCC----CeEEEEEEEeccCC
Confidence 00000 1123333333334344321 1226677888999999999999887 7776555 4666666677542
Q ss_pred -CCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCC
Q 017726 317 -INSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGH 353 (367)
Q Consensus 317 -~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~ 353 (367)
.+..+++..+.+++||.+.+|..+ ..++++||++...
T Consensus 338 ~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~ 377 (398)
T PRK08363 338 WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPP 377 (398)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCC
Confidence 245677666656779999998543 2346899997543
No 102
>PRK07337 aminotransferase; Validated
Probab=99.97 E-value=5.1e-29 Score=229.18 Aligned_cols=303 Identities=12% Similarity=0.024 Sum_probs=210.6
Q ss_pred CChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
+.++.+.+++.+.... ...|.......++|+.+++++ |.. .+++|++|+|+++++..++.+++++||+|++++|
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p 122 (388)
T PRK07337 43 TAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDP 122 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3466777777664322 223333344667888888876 432 3356999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
.|+++. ..++..|.+++.++.+. ++.+|++++++.++ +++++|++++|+||||.+++ +++|.++|++
T Consensus 123 ~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~-- 194 (388)
T PRK07337 123 SYPCNR--HFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG----ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRA-- 194 (388)
T ss_pred CchhhH--HHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC----ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--
Confidence 887754 44567899999999864 35789999999887 46799999999999999997 5667888888
Q ss_pred CCcEEEEeeeeccCcee---eccccccc-eEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 168 HPALFLVDGVSSICAID---FRMDEWGI-DVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~---~~~~~~~~-d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+++++++|++|...... ......+. -+++.|+||.++ .+| +|++++++++++++......
T Consensus 195 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~G~RiG~~~~~~~l~~~l~~~~~~------------- 260 (388)
T PRK07337 195 RGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFN-MTGWRLGWLVVPEALVGTFEKLAQN------------- 260 (388)
T ss_pred CCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcC-CchhheeeeecCHHHHHHHHHHHHH-------------
Confidence 99999999998643221 11111222 356789999984 444 79999999988877643110
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCcc-ccCCCccCCCceEEEEcCC-----
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN-CTQKEEWFSDTVTAVIVPS----- 315 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~----- 315 (367)
. ....+.....++..++..-....+++.++.++++++++.+.|++.|+.+ ..+ .++.++|++++.
T Consensus 261 --~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~f~~~~~~~~~~~~ 331 (388)
T PRK07337 261 --L---FICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMP----DGAFYVYADCRGVAHPA 331 (388)
T ss_pred --h---ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC----CeeEEEEEecccccCCC
Confidence 0 1112332222323233210001156677888889999999999987654 233 466788888853
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLG 352 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~ 352 (367)
..+..++++++.+++||.+.+|..+. ..+++||++..
T Consensus 332 ~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~ 371 (388)
T PRK07337 332 AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT 371 (388)
T ss_pred CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC
Confidence 24677899887777799999885432 24689999764
No 103
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.97 E-value=1.6e-28 Score=223.57 Aligned_cols=307 Identities=14% Similarity=0.065 Sum_probs=213.2
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++|+.+.+++.+.......|.... ..++|+.++++++++++ +|++|+|+++++.+++.++ .+||.|+++.|.|.
T Consensus 32 n~~~~~~~~~~a~~~~~~~~~~Y~~~~-~~~Lr~aia~~~~v~~~-~I~it~G~~~~i~~~~~~l-~~g~~vlv~~P~y~ 108 (360)
T PRK07392 32 NPLGPPESVIAAIQSALSALRHYPDPD-YRELRLALAQHHQLPPE-WILPGNGAAELLTWAGREL-AQLRAVYLITPAFG 108 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCcC-HHHHHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCCCeEEEECCCcH
Confidence 456678888888876433222232222 46899999999998775 5999999999999988875 47889999999776
Q ss_pred hHHHHHHHHHhCCceEEEeCCCCCC-----CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCc
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWGEG-----AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA 170 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~~~-----~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~ 170 (367)
.+ ...++..|.+++.++.+.++. .+++++++.. ++++++++++||||||.+++.++|.+++++ +++
T Consensus 109 ~~--~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~--~~~ 179 (360)
T PRK07392 109 DY--RRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-----TPNDGLLLNNPHNPTGKLWSREAILPLLEQ--FAL 179 (360)
T ss_pred HH--HHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-----cCCCEEEEeCCCCCCCCCcCHHHHHHHHHH--CCE
Confidence 64 356778999999999875543 3455554432 357999999999999999999999999998 775
Q ss_pred EEEEeeeeccCceee---c----cccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 171 LFLVDGVSSICAIDF---R----MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 171 ~vi~D~~~~~~~~~~---~----~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+|+|++|....... + ......-+++.|+||.++ ...++|++++++++++++.....
T Consensus 180 -~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~--------------- 243 (360)
T PRK07392 180 -VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD--------------- 243 (360)
T ss_pred -EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC---------------
Confidence 66699986543210 1 111234688999999995 33447999999998887753211
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHH
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (367)
.++.+.....++.++++. .+. .++.++.++++++.+.+.|+++ |+.+..+ .+++++++++. +..+
T Consensus 244 -----~~~~s~~~q~~~~~~l~~-~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-----~~~fl~~~~~~--~~~~ 309 (360)
T PRK07392 244 -----PWPVNGLAAAAAIAALAD-RDF-QQQTWAWLPPAREALFQGLASLPGLTPLPS-----AANFLLVQSQG--SALQ 309 (360)
T ss_pred -----CCCCCHHHHHHHHHHhcc-HHH-HHHHHHHHHHHHHHHHHHHHhCCCcEECCC-----CCCEEEEEcCC--CHHH
Confidence 233555444444444432 111 3445667788899999999887 7766442 34567777742 6778
Q ss_pred HHHHHHhhCCeEEccCCCCC--CCcEEEEeecCCCCHHHHHHhhhh
Q 017726 322 IVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
+.+.+.+++||.+.+|.... ..+++||++ +..++.+.+.+.|+
T Consensus 310 l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~-~~~~~~~~l~~al~ 354 (360)
T PRK07392 310 LQEKLLQQHRILIRDCLSFPELGDRYFRVAV-RTEAENQRLLEALA 354 (360)
T ss_pred HHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe-CCHHHHHHHHHHHH
Confidence 99887677799999986542 346899995 44444455555544
No 104
>PLN02187 rooty/superroot1
Probab=99.97 E-value=1.5e-28 Score=229.10 Aligned_cols=306 Identities=12% Similarity=0.022 Sum_probs=209.2
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.+++.+.+++.+.... ...|.......++|+.++++++. + ++++|++|+|+++++..++.++++|||.|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~ 162 (462)
T PLN02187 83 RTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPR 162 (462)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3456667766654322 22343345677899999998852 1 335699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
|.|+.+. ..++..|.+++.++.. .++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 163 P~y~~y~--~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~----~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~- 235 (462)
T PLN02187 163 PGFPHYD--ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD----ENTVAMVVINPNNPCGNVYSHDHLKKVAETARK- 235 (462)
T ss_pred CCCccHH--HHHHHcCCEEEEEeCccccCCccCHHHHHHhcC----CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHH-
Confidence 9887643 4567889999999874 357899999999887 46799999999999999997 6678888888
Q ss_pred CCCcEEEEeeeeccCce---ee-cc---ccccceEEEecCCCcccCCCc--ceeeeeC-HH-H---HHHhccCCCCceee
Q 017726 167 RHPALFLVDGVSSICAI---DF-RM---DEWGIDVALTGSQKALSLPTG--MGIVCAS-PK-A---LEASKTAKSVRVFF 232 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~---~~-~~---~~~~~d~~~~s~~K~~~g~~g--~g~~~~~-~~-~---~~~~~~~~~~~~~~ 232 (367)
+|++||+|++|..... ++ +. ......+++.|++|.+. .+| +|++++. ++ . ++.+.....
T Consensus 236 -~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~-~pGlRiG~~v~~~p~~~~~~~~~~~~~~~----- 308 (462)
T PLN02187 236 -LGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWV-VPGWKIGWIALNDPEGVFETTKVLQSIKQ----- 308 (462)
T ss_pred -CCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcC-CccceeEEEEecCchhHHHHHHHHHHHHH-----
Confidence 9999999999875322 11 11 11123588899999974 555 6999973 33 2 223322110
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC-Ccc-ccCCCccCCCceEE
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKN-CTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~-~~~~~~~~~~~~~~ 310 (367)
.+.. ...++.....++.+++....+.-+++.++.+.++++.+.+.|++.+ +.. ..| .++++++
T Consensus 309 -------~~~~----~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P----~gg~fl~ 373 (462)
T PLN02187 309 -------NLDV----TPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKP----ESCTYLL 373 (462)
T ss_pred -------hccc----cCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCC----CEeEEEE
Confidence 0000 0123444444444444321111267788889999999999999874 322 233 3556777
Q ss_pred EEcCC----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCC
Q 017726 311 VIVPS----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 353 (367)
Q Consensus 311 ~~~~~----~~-~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~ 353 (367)
++++. +. +..++++.+.++.||.+.+|..+...++|||++...
T Consensus 374 ~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~ 421 (462)
T PLN02187 374 TKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVE 421 (462)
T ss_pred eecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCC
Confidence 76632 22 456787777677799999986554567899997543
No 105
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.97 E-value=3.1e-28 Score=222.92 Aligned_cols=318 Identities=9% Similarity=0.056 Sum_probs=225.4
Q ss_pred CCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCC-ceEEe--cCChhHHHHHHHHccC-------
Q 017726 17 PVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG-TPFLI--PTTGTGAWESALTNTL------- 81 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~--~~ggt~al~~~~~~~~------- 81 (367)
.+++.+.+.+.+.+.... ...+......+++++++++++|.+++ +++.+ |+|||+|++.++.+..
T Consensus 50 tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~ 129 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM 129 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence 556666677776664331 22334457888999999999999832 23444 8999999998875432
Q ss_pred -CC-----CCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 82 -SP-----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 82 -~~-----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
.. +..|+++..+|++ +.+.++..|++++.++++++ +.+|+++|+++|++ ++.+|++++.+|.+|.+.
T Consensus 130 ~~~g~~~~~~~ii~s~~~H~s--v~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~----~t~lV~~t~g~t~tG~id 203 (431)
T TIGR01788 130 EAAGKPTDKPNLVMGSNVQVC--WEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE----NTIGVVCILGTTYTGEYE 203 (431)
T ss_pred HhcCCCCCCcEEEEcCcchHH--HHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh----CCeEEEEEeCCCCCcccC
Confidence 11 2368888888877 44777888999999999875 58999999999984 568999999999999999
Q ss_pred cHHHHHHHHHhcCC------CcEEEEeeeeccCc-------eeeccccccceEEEecCCCcccCCCcceeeeeCHHH--H
Q 017726 155 NLSKVRKLLDEYRH------PALFLVDGVSSICA-------IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA--L 219 (367)
Q Consensus 155 ~~~~i~~~~~~~~~------~~~vi~D~~~~~~~-------~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~--~ 219 (367)
|+++|.++|++ + |+++++|++++.+. .+.++...++|.++.|+|||+.+|.|+|+++++++. .
T Consensus 204 pi~~I~~i~~~--~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~ 281 (431)
T TIGR01788 204 DVKALNDALDE--YNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALP 281 (431)
T ss_pred CHHHHHHHHHH--HHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcc
Confidence 99999999999 7 89999999999443 344445557899999999999889999999988752 1
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT 298 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (367)
+.+.. ...+...... +.+ ..++.+....++.+..+..+...|++++.++..++++++.+.|++. +++++.
T Consensus 282 ~~~~~---~~~yl~~~~~----~~t--~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~ 352 (431)
T TIGR01788 282 EELIF---HVNYLGGDEP----TFT--LNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS 352 (431)
T ss_pred hhhee---cccccCCCCC----Ccc--eecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee
Confidence 22211 0111110000 000 1112333344567777777888899999999999999999999998 688886
Q ss_pred CCCccCCCceEEEEcCC----CCCHHHHHHHHHhhCCeEEccCCCC--CCC-cEEEEeecCCCC
Q 017726 299 QKEEWFSDTVTAVIVPS----HINSSEIVRRAWQRYNLSLGLGLNK--VAG-KVFRIGHLGHLN 355 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~~gv~v~~g~~~--~~~-~~iRi~~~~~~~ 355 (367)
+.+ ...+++|+... +.+..++.+.|.++ |+.+.....+ ..+ .++|+++....+
T Consensus 353 ~~~---~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~~p~~~~~~~~lR~~~~~~~~ 412 (431)
T TIGR01788 353 DGS---GIPLVAFKLKDDADPGYTLYDLSHRLRER-GWIVPAYTLPKNAEDIVVMRIVVREGFS 412 (431)
T ss_pred CCC---CceEEEEEeCCCCCCCcCHHHHHHHHHHC-CCcccCCCCCCccCCeEEEEEEecCCCC
Confidence 521 34578898842 35677899999754 8865432222 222 358998865444
No 106
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.97 E-value=1.1e-28 Score=227.80 Aligned_cols=303 Identities=13% Similarity=0.053 Sum_probs=213.6
Q ss_pred CChHHHHHHHccCCCCC--CCCcHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNEDY--RSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
++++.+.+++.+..... ..|.......++|+.++++++.. .++++++|+|+++++.+++.+++.+||+|+++.
T Consensus 48 ~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~ 127 (403)
T TIGR01265 48 RTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPR 127 (403)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeC
Confidence 56788888887754321 23333455778999999999852 345699999999999999999889999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
|+|... ...++..|++++.++.+. ++.+|++++++++. ++++++++++|+||||.+++ +++|.++|++
T Consensus 128 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~- 200 (403)
T TIGR01265 128 PGFPLY--DTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD----EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARK- 200 (403)
T ss_pred CCchhH--HHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC----cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHH-
Confidence 976653 355778899999988753 45789999999887 46799999999999999986 7788889998
Q ss_pred CCCcEEEEeeeeccCcee----ec---cccccceEEEecCCCcccCC-CcceeeeeC-H-H-----HHHHhccCCCCcee
Q 017726 167 RHPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALSLP-TGMGIVCAS-P-K-----ALEASKTAKSVRVF 231 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~-~-~-----~~~~~~~~~~~~~~ 231 (367)
+|+++|+|++|...... .. +.....-+++.|+||.+..| .++|+++++ + + +++.+...
T Consensus 201 -~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~------ 273 (403)
T TIGR01265 201 -LGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNL------ 273 (403)
T ss_pred -CCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHH------
Confidence 99999999998754321 11 11112357888999986422 337999874 2 2 22222211
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (367)
. .. ...++.....++..++....+.-+++.++++.++++.+.+.|+.+ |+.+..+ .+++++|
T Consensus 274 ----------~-~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~~g~f~~ 336 (403)
T TIGR01265 274 ----------L-QR--ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP----EGAMYLM 336 (403)
T ss_pred ----------h-hh--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CceeEEE
Confidence 0 00 112344333344444432111126677888899999999999887 7765554 4667888
Q ss_pred EEcCCC-----CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 311 VIVPSH-----INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 311 ~~~~~~-----~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
++++++ .+..++++.|.+++||.+.+|..+..++++||++..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~ 383 (403)
T TIGR01265 337 VKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV 383 (403)
T ss_pred EeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC
Confidence 888543 267789888777779999998655456789999754
No 107
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=2.7e-28 Score=225.50 Aligned_cols=309 Identities=14% Similarity=0.056 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHHccCCC--CCeEEEEeCCcchHH--HHHHHHHhCCceEEEe
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALTNTLSP--GDRIISFLIGQFSLL--WIDQQQRLNFNVDVVE 114 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt-~al~~~~~~~~~~--gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 114 (367)
..+..+++++.+++++|.+.++ +++++||+ ++...+..+.+.+ ||.|+++++.|.++. +....+..|.+++.++
T Consensus 62 ~~~~~~~~~~~la~~~g~~~~~-v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~ 140 (398)
T cd00613 62 RLQALFELQTMLCELTGMDVAN-ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVP 140 (398)
T ss_pred HHHHHHHHHHHHHHHHCCCccc-eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEec
Confidence 3466788999999999987544 66666555 4444444455555 999999999777764 2222223348999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH-HHHHHHHHhcCCCcEEEEeeeeccCceeeccccccce
Q 017726 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL-SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGID 193 (367)
Q Consensus 115 ~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~-~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d 193 (367)
.+.++.+|++++++++. +++++|++++++ ++|.+.|. ++|.++|++ +|+++|+|++|+.+....+....++|
T Consensus 141 ~~~~~~~d~~~l~~~i~----~~t~~viv~~~~-~~G~~~~~l~~i~~la~~--~g~~livD~~~~~~~~~~~~~~~~~d 213 (398)
T cd00613 141 SDEGGTVDLEALKEEVS----EEVAALMVQYPN-TLGVFEDLIKEIADIAHS--AGALVYVDGDNLNLTGLKPPGEYGAD 213 (398)
T ss_pred cCCCCCcCHHHHHHhcC----CCeEEEEEECCC-CCceecchHHHHHHHHHh--cCCEEEEEeccccccCCCChHHcCCC
Confidence 87777889999999987 467999999985 89999985 999999999 99999999998766655555566899
Q ss_pred EEEecCCCcccCC-----CcceeeeeCHHHHHHhccCCC---------CceeechHH--HHHHhhcCCccCCCCcHHHHH
Q 017726 194 VALTGSQKALSLP-----TGMGIVCASPKALEASKTAKS---------VRVFFDWKD--YIKFYNLGTFWPYTPSIQLLY 257 (367)
Q Consensus 194 ~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 257 (367)
++++|+||++ +| +|+|++++++++++.+..... ..+.+++.. ...+++.++...++.+.....
T Consensus 214 ~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~ 292 (398)
T cd00613 214 IVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLAL 292 (398)
T ss_pred EEEeeccccC-CCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHH
Confidence 9999999998 44 557899999988876533211 111111110 112233343223344444444
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC--CCCHHHHHHHHHhhCCeEEc
Q 017726 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 258 al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~v~ 335 (367)
+...++..+.+.|+++++++..++++++.+.|++++.... +... .. ..++++++. +.+..++++.|.++ ||.+.
T Consensus 293 ~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~-~~-~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~ 368 (398)
T cd00613 293 MAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLP-FNGP-FF-HEFVLRLPPLYGIRAEDLAKALIDG-GFHAP 368 (398)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCC-ee-EEEEEEcCCcchHHHHHHHHhhhhc-Ccccc
Confidence 5555566666778889999999999999999999854332 2111 12 235677743 34577899999755 88764
Q ss_pred cCCCCCCCcEEEEeecCCCCHHHHHHh
Q 017726 336 LGLNKVAGKVFRIGHLGHLNEVMFNFQ 362 (367)
Q Consensus 336 ~g~~~~~~~~iRi~~~~~~~~~~~~~~ 362 (367)
... +..+..+|++++.+++.+|++..
T Consensus 369 ~~~-~~~~~~lRis~~~~~t~edid~~ 394 (398)
T cd00613 369 TMY-LPVDGTLMIEPTETETKEELDAL 394 (398)
T ss_pred ccc-cCCCCeEEEEcCCCCCHHHHHHH
Confidence 322 22346799999999988877653
No 108
>PRK09265 aminotransferase AlaT; Validated
Probab=99.97 E-value=2.1e-28 Score=226.14 Aligned_cols=306 Identities=15% Similarity=0.092 Sum_probs=202.2
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
+.++.+.+++.+.......|.......++|+.+++++ ++++ ++|++++|+++++..++.+++.+||+|++++|
T Consensus 49 ~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p 127 (404)
T PRK09265 49 EAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-DDIYIGNGVSELIVMAMQALLNNGDEVLVPAP 127 (404)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-ccEEEeCChHHHHHHHHHHhCCCCCEEEEeCC
Confidence 4677788887764333233433345568999999998 4554 45999999999999999998999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
.|.... ..++..|.+++.++.+. ++.+|++++++++. +++++|++++|+||||.+++ +++|.++|++
T Consensus 128 ~y~~~~--~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~-- 199 (404)
T PRK09265 128 DYPLWT--AAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT----PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQ-- 199 (404)
T ss_pred CCcChH--HHHHHcCCEEEEEecccccCCCCCHHHHHHhcc----ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHH--
Confidence 887643 45667888888887653 35689999999886 46799999999999999998 7888889998
Q ss_pred CCcEEEEeeeeccCcee----ec---cccccceEEEecCCCcccCCCc--ceeeee--CHHHHHHhccCCCCceeechHH
Q 017726 168 HPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALSLPTG--MGIVCA--SPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~g~~g--~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
+|++||+|++|...... .+ .......+++.|++|.++ .+| +|+++. +++..+.+....
T Consensus 200 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~pGlRiG~~v~~~~~~~~~~~~~~~---------- 268 (404)
T PRK09265 200 HNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYR-VAGFRVGWMVLSGPKKHAKGYIEGL---------- 268 (404)
T ss_pred CCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhcc-CcccceEEEEEeCchHHHHHHHHHH----------
Confidence 99999999998643211 11 111123467789999984 444 699986 333222111000
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-GLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
...... .+.++.....++..++...... .+.+..+++.++++.+.+.|+++ |+.+..+ .+++++|++++
T Consensus 269 --~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p----~~g~~l~~~~~ 339 (404)
T PRK09265 269 --DMLASM---RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKP----KGALYAFPKLD 339 (404)
T ss_pred --HHHhcc---ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEEEEec
Confidence 000000 1123333334444444321111 01112245677788899999887 7776666 46677888875
Q ss_pred CCC----CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCC
Q 017726 315 SHI----NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGH 353 (367)
Q Consensus 315 ~~~----~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~ 353 (367)
... +..++...+.+++||.+.+|..+ ..++++|+++...
T Consensus 340 ~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~ 384 (404)
T PRK09265 340 PKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPR 384 (404)
T ss_pred ccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCC
Confidence 421 34444444446679999998543 2357899998433
No 109
>PRK03321 putative aminotransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=224.08 Aligned_cols=306 Identities=15% Similarity=0.105 Sum_probs=217.4
Q ss_pred CCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcch
Q 017726 17 PVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFS 96 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~ 96 (367)
+.++++.+.+++.+.......|. .....++|+.++++++++++ +|++++|+++++..++..++.+||.|+++.|.|..
T Consensus 33 ~~~~~~~~~~a~~~~~~~~~~y~-~~g~~~lr~~ia~~~~~~~~-~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~ 110 (352)
T PRK03321 33 PFGPLPSVRAAIARAAAGVNRYP-DMGAVELRAALAEHLGVPPE-HVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEA 110 (352)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCC-CCcHHHHHHHHHHHhCcCHH-HEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHH
Confidence 44567788888877543222221 24578999999999997654 59999999999998888888999999999886654
Q ss_pred HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 97 LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 97 ~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+ ...++..|.+++.++.++++.+|+++++++++ ++++++++++|+||||.++|.+++.++|+..++++++++|+
T Consensus 111 ~--~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De 184 (352)
T PRK03321 111 Y--PILVQVAGATPVQVPLTPDHTHDLDAMAAAIT----DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDE 184 (352)
T ss_pred H--HHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc----cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEec
Confidence 3 24567789999999988667889999999987 46799999999999999999999999998754699999999
Q ss_pred eeccCcee------ecc-ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCcc
Q 017726 177 VSSICAID------FRM-DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 177 ~~~~~~~~------~~~-~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
+|...... +.. ......+++.|++|.++ .+| +|++++++++++.+.... .
T Consensus 185 ~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRiG~~v~~~~~~~~~~~~~-----------------~--- 243 (352)
T PRK03321 185 AYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYG-LAGLRVGYAVGHPEVIAALRKVA-----------------V--- 243 (352)
T ss_pred hHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhh-hHHHhhhhhcCCHHHHHHHHHhc-----------------C---
Confidence 98643221 111 11134588889999984 444 799999999988876421 0
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHH
Q 017726 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (367)
.++.+.....+..+++..... ..+..++..+.++.+.+.|++.|+.+..+ .+.+++++++ .+..++++.|.
T Consensus 244 ~~~~s~~~q~~a~~~l~~~~~--~~~~~~~~~~~r~~~~~~L~~~~~~~~~~-----~g~~i~i~l~--~~~~~~~~~l~ 314 (352)
T PRK03321 244 PFSVNSLAQAAAIASLAAEDE--LLERVDAVVAERDRVRAALRAAGWTVPPS-----QANFVWLPLG--ERTADFAAAAA 314 (352)
T ss_pred CCCCCHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHHHHCCCccCCC-----CCCEEEEeCC--CCHHHHHHHHH
Confidence 223455443444444432222 33444555566778888998887665332 3456777763 35778999985
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 328 ~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
++||.+.+ + .+..+||++ +..++.+.+..+|++
T Consensus 315 -~~gI~v~~-~---~~~~iRi~~-~~~~~~~~~~~al~~ 347 (352)
T PRK03321 315 -EAGVVVRP-F---AGEGVRVTI-GAPEENDAFLRAARA 347 (352)
T ss_pred -HCCEEEEc-c---CCCcEEEee-CCHHHHHHHHHHHHH
Confidence 56999986 2 234699995 555556665555543
No 110
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=6.6e-29 Score=226.88 Aligned_cols=311 Identities=20% Similarity=0.171 Sum_probs=225.4
Q ss_pred CChHHHHHHHcc---CCCCCCCCcHHHHHHHHHHHHHHHhc------CCCCceEEecCChhHHHHHHHHcc-CCCCCeEE
Q 017726 19 HIPDQVIRAMNR---NNEDYRSPAVPALTKTLLEDIKKIFK------TTSGTPFLIPTTGTGAWESALTNT-LSPGDRII 88 (367)
Q Consensus 19 ~~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl 88 (367)
+.++++++++.+ .......|.......++|+.++++++ .+++.++++++|+.+++..++..+ ..+|+.|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vl 97 (363)
T PF00155_consen 18 PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVL 97 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEE
T ss_pred cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccce
Confidence 356667777665 22223345445678899999999999 555435888887778888878777 78999999
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCC--CccEEEEEecCCCccccccHHHHHHH--
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLSKVRKL-- 162 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~--~~~lv~~~~~~n~tG~~~~~~~i~~~-- 162 (367)
++.|.|+... ..++..|++++.++++ .++.+|++++++.+++...+ +++++++++|+||||..++.+++.++
T Consensus 98 v~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~ 175 (363)
T PF00155_consen 98 VPDPCYPSYI--EAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAE 175 (363)
T ss_dssp EEESSSTHHH--HHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHH
T ss_pred ecCCcccccc--ccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhh
Confidence 9999887753 6678899999999864 56788999999999963212 46899999999999999986665555
Q ss_pred -HHhcCCCcEEEEeeeeccCcee--------eccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCcee
Q 017726 163 -LDEYRHPALFLVDGVSSICAID--------FRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 163 -~~~~~~~~~vi~D~~~~~~~~~--------~~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
|++ +|+++++|++|...... .........+++.|++|.++ .+| +|++++++++++.+....
T Consensus 176 ~~~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-~~GlRvG~i~~~~~~~~~l~~~~----- 247 (363)
T PF00155_consen 176 LARE--YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG-LPGLRVGYIVAPPELIERLRRFQ----- 247 (363)
T ss_dssp HHHH--TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT-SGGGTEEEEEEEHHHHHHHHHHH-----
T ss_pred hhcc--cccceeeeeceeccccCCCccCcccccccccccceeeeecccccc-ccccccccccchhhhhhhhhhcc-----
Confidence 888 99999999999865443 11122223599999999984 555 699999999888776421
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (367)
... ..+.....++..++...... -+++++++++++++++.+.|++.|+.+..+ .++.++
T Consensus 248 ----------~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~----~~~~~~ 308 (363)
T PF00155_consen 248 ----------RSG-----LSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITVLPP----EAGFFL 308 (363)
T ss_dssp ----------HHT-----TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHH----SBSSEE
T ss_pred ----------ccc-----cccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhheeec----cCccEE
Confidence 111 12333333344444433321 267889999999999999999999888886 466677
Q ss_pred EEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 310 ~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
++..+.. +..+++++|.+++||.+.+|..+...+++||++ +..+.+++.
T Consensus 309 ~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~ 357 (363)
T PF00155_consen 309 WVRLDPN-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLE 357 (363)
T ss_dssp EEEESHH-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHH
T ss_pred EEEcccc-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHH
Confidence 7777322 568999999988899999987665578899998 555554443
No 111
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2e-28 Score=223.71 Aligned_cols=307 Identities=15% Similarity=0.092 Sum_probs=218.6
Q ss_pred CCCCChHHHHHHHccCCC----C-CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCC
Q 017726 16 GPVHIPDQVIRAMNRNNE----D-YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGD 85 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd 85 (367)
.|.++|+.+.+++.+... . .+++. ....++|+.+++++ |.+ .+++|++|+|+++++..++.+++++||
T Consensus 36 ~~~~~~~~~~~al~~~l~~~~~~~~~Y~~--~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd 113 (368)
T PRK03317 36 NPYPPSPALVADIAEAVAEAAAGLNRYPD--RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGR 113 (368)
T ss_pred CCCCCCHHHHHHHHHHHhhhhhhhccCCC--CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCC
Confidence 356778888888876432 1 22232 24578899999988 432 334699999999999999999999999
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
.|++..|.|..+. ..++..|.+++.++.+.++.+|++++++++++ ++++++++++|+||||.+++.+++.++++.
T Consensus 114 ~v~v~~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 188 (368)
T PRK03317 114 TALGFVPSYSMHP--IIARGTHTEWVEGPRAADFTLDVDAAVAAIAE---HRPDVVFLTSPNNPTGTALPLDDVEAILDA 188 (368)
T ss_pred EEEEeCCChHHHH--HHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc---cCCCEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999776643 45677899988888776788999999999874 367899999999999999999999999998
Q ss_pred cCCCcEEEEeeeeccCcee-----ecc-ccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 166 YRHPALFLVDGVSSICAID-----FRM-DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~-----~~~-~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
.++++|+|++|...... ... ......+++.|++|.++ ....+|++++++++++.+.....
T Consensus 189 --~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~----------- 255 (368)
T PRK03317 189 --APGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL----------- 255 (368)
T ss_pred --CCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC-----------
Confidence 78999999998754211 111 11123578889999985 22336999999999888764311
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
++..+.....+..++++.... +.+.++++.++++.+.+.|++.|+.+..+ .++++++... .+
T Consensus 256 ---------~~~~s~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~---~~ 317 (368)
T PRK03317 256 ---------PYHLSAVTQAAARAALRHADE--LLASVAALRAERDRVVAWLRELGLRVAPS----DANFVLFGRF---AD 317 (368)
T ss_pred ---------CCCCCHHHHHHHHHHhhCHHH--HHHHHHHHHHHHHHHHHHHHHCCCEeCCC----CCcEEEEecc---CC
Confidence 223444444444555543222 34455667888889999999888876655 3443443333 25
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
..++.+.|.+ +||.+.+.. .++++||++. ..++.+.+.++|+
T Consensus 318 ~~~~~~~l~~-~Gv~v~~~~---~~~~iRi~~~-~~~~~~~~~~~l~ 359 (368)
T PRK03317 318 RHAVWQGLLD-RGVLIRDVG---IPGWLRVTIG-TPEENDAFLAALA 359 (368)
T ss_pred HHHHHHHHHH-CCEEEEeCC---CCCeEEEecC-CHHHHHHHHHHHH
Confidence 6788888875 599998632 2468999964 4455556665554
No 112
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=3.8e-28 Score=220.91 Aligned_cols=285 Identities=13% Similarity=0.093 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC---CC
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW---GE 119 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~---~~ 119 (367)
..++|+.++++++++++ +|++++|+++++..++.+++.+| +.|++++|.| +. +...++..|.+++.++.+. ++
T Consensus 61 ~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y-~~-~~~~~~~~g~~~~~v~~~~~~~~~ 137 (364)
T PRK04781 61 PPGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVF-GM-YAVCARLQNAPLVEVPLVDGADGF 137 (364)
T ss_pred HHHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCCh-HH-HHHHHHHcCCEEEEEecCCCccCC
Confidence 47999999999998764 59999999999999999988888 7889888854 33 3345677899999999742 24
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---c-cccccceEE
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---R-MDEWGIDVA 195 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~-~~~~~~d~~ 195 (367)
.+|++++++.+.. +++++|++++|+||||.++|.+++.++++...++++||+|++|....... . ......-++
T Consensus 138 ~~d~~~l~~~~~~---~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~ 214 (364)
T PRK04781 138 HADVPAIVAAALA---SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAV 214 (364)
T ss_pred CcCHHHHHHHHhc---cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEE
Confidence 5788888665532 47899999999999999999999999888744589999999987443211 1 112235688
Q ss_pred EecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh---Ch
Q 017726 196 LTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE---GL 271 (367)
Q Consensus 196 ~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~---g~ 271 (367)
+.|+||.++ ...++|++++++++++.+..... ++..+... +..+...+... -.
T Consensus 215 ~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~--------------------~~~~~~~~---~~~a~~~l~~~~~~~~ 271 (364)
T PRK04781 215 LRTLSKAHALAAARIGSLIANAELIAVLRRCQA--------------------PYPVPTPC---AALAEQALSAPALAVT 271 (364)
T ss_pred EecChhhcccccceeeeeeCCHHHHHHHHhccC--------------------CCCCCHHH---HHHHHHHHhcccHHHH
Confidence 999999985 23347999999999888875421 22233322 22333333322 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC-CCCCcEEEEe
Q 017726 272 ENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN-KVAGKVFRIG 349 (367)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~-~~~~~~iRi~ 349 (367)
.+..+++.++++.+.+.|+++ |+....+ ..+.+++++++ +..++.+.|. ++||.++++.. +..++++||+
T Consensus 272 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~p----~~g~f~~~~~~---~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~Ris 343 (364)
T PRK04781 272 ARRVAEVRAERERLHAALAQLPGVRRVYP----SQGNFLLVRFD---DAEAAFQALL-AAGVVVRDQRAAPRLSDALRIT 343 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeECC----CCCcEEEEEcC---CHHHHHHHHH-HCCeEEeeCCCCCCCCCeEEEe
Confidence 455567788899999999988 7643333 24557888875 4678888886 55999998753 2235689999
Q ss_pred ecCCCCHHHHHHhhhhc
Q 017726 350 HLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 350 ~~~~~~~~~~~~~~l~~ 366 (367)
+ +..++.+.+.++|++
T Consensus 344 ~-~~~~~~~~l~~al~~ 359 (364)
T PRK04781 344 L-GTPEQNDRVLAALQR 359 (364)
T ss_pred C-CCHHHHHHHHHHHHH
Confidence 4 666666777777664
No 113
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=8.8e-28 Score=221.68 Aligned_cols=282 Identities=16% Similarity=0.118 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (367)
.+...++++.+++++|.+. +++++||++|+..++.+++++||.|++.++.|.+.. ..++..+.+...++ .
T Consensus 82 ~~~~~~le~~ia~~~g~~~---~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~--~~~~~~~~~~~~~~-----~ 151 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTED---TILYASCFDANGGLFETLLGAEDAIISDALNHASII--DGVRLCKAKRYRYA-----N 151 (393)
T ss_pred hHHHHHHHHHHHHHhCCCc---EEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHH--HHHHhcCCceEEeC-----C
Confidence 5667899999999999753 455588899999999889999999999999888754 33455666554443 3
Q ss_pred CCHHHHHHHHhccCC--CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---------cccc
Q 017726 121 AKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---------RMDE 189 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---------~~~~ 189 (367)
.|++++++++++... .++++|++.+++|+||.+.|+++|.++|++ +|+++++|++|+.+.... +..
T Consensus 152 ~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~--~~~~li~De~~~~g~~~~~~~~~~~~~~~~- 228 (393)
T TIGR01822 152 NDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADK--YDALVMVDECHATGFLGPTGRGSHELCGVM- 228 (393)
T ss_pred CCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHH--cCCEEEEECCccccCcCCCCCchHHhcCCC-
Confidence 689999999885311 277899999999999999999999999999 999999999997654321 111
Q ss_pred ccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh
Q 017726 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~ 269 (367)
.++|++++|+||+++|+. .|++++++++++.+...... ... ..+.+...+.+..++++.+.
T Consensus 229 ~~~di~~~s~sK~l~g~r-~G~~~~~~~~~~~l~~~~~~-~~~---------------~~~~~~~~~~a~~~al~~~~-- 289 (393)
T TIGR01822 229 GRVDIITGTLGKALGGAS-GGFTTARKEVVELLRQRSRP-YLF---------------SNSLPPAVVGASIKVLEMLE-- 289 (393)
T ss_pred CCCeEEEEEChHHhhCCC-cEEEEeCHHHHHHHHHhCcc-cee---------------cCCCCHHHHHHHHHHHHHHh--
Confidence 257999999999997655 59999999998877642111 111 12344444455666676653
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEE
Q 017726 270 GLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVF 346 (367)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~---~~~~~i 346 (367)
+.+++++++.++++++.+.|++.|+.+..+ .. .++.+.+++..+..++++.|.++ ||.+.....+ .....+
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~~~~i~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~i 363 (393)
T TIGR01822 290 ASNELRDRLWANTRYFRERMEAAGFDIKPA----DH-PIIPVMLYDAVLAQRFARRLLEE-GIYVTGFFYPVVPKGQARI 363 (393)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC----CC-CEEEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceE
Confidence 256788899999999999999888776543 12 24555554434567899999766 9998733222 122459
Q ss_pred EEeecCCCCHHHHH
Q 017726 347 RIGHLGHLNEVMFN 360 (367)
Q Consensus 347 Ri~~~~~~~~~~~~ 360 (367)
|+++....+.+|+.
T Consensus 364 Ris~~~~~t~edi~ 377 (393)
T TIGR01822 364 RVQISAAHTEEQLD 377 (393)
T ss_pred EEEECCCCCHHHHH
Confidence 99887766555443
No 114
>PRK08175 aminotransferase; Validated
Probab=99.97 E-value=3e-28 Score=224.36 Aligned_cols=301 Identities=14% Similarity=0.110 Sum_probs=209.5
Q ss_pred hHHHHHHHccCCC--CCCCCcHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 21 PDQVIRAMNRNNE--DYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~la~~~----~~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
++.+.+++.+... ....|.......++|+.+++++ |.. +++++++|+|+++++..++..++.|||+|++++|
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P 123 (395)
T PRK08175 44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNP 123 (395)
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCC
Confidence 4445666554321 1223433345567778777775 443 3335999999999999988888999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhcCCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHP 169 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~~~~ 169 (367)
.|+... ..++..|+++..++.+.++. +.+++++++++.. ++++++++++|+||||.+++. ++|.++|++ +|
T Consensus 124 ~y~~~~--~~~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~--~~ 197 (395)
T PRK08175 124 SYPIHI--YGAVIAGAQVRSVPLVEGVD-FFNELERAIRESY-PKPKMMILGFPSNPTAQCVELEFFEKVVALAKR--YD 197 (395)
T ss_pred CCcchH--HHHHHcCCeEEEEecccCCC-cHHHHHHHHhhcc-CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH--cC
Confidence 877653 33567899999999875543 4788888887533 478999999999999999986 678888888 99
Q ss_pred cEEEEeeeeccCcee----ec---ccc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 170 ALFLVDGVSSICAID----FR---MDE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~----~~---~~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+++|+|+++...... .. ... .+..+++.|++|.++ .+| +|+++.++++++++.....
T Consensus 198 i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~pGlRiG~~~~~~~l~~~~~~~~~------------ 264 (395)
T PRK08175 198 VLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYN-MAGWRIGFMVGNPELVSALARIKS------------ 264 (395)
T ss_pred cEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeecccccc-CcchhheeeeCCHHHHHHHHHHHh------------
Confidence 999999998643211 11 111 134577899999994 444 6999999999887764211
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC--
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI-- 317 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 317 (367)
. ..++.+.....+...++.... ..++++++.++++++++.+.|+++|+.+..+ .++.++++++++..
T Consensus 265 ----~--~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p----~~g~~i~i~l~~~~~~ 333 (395)
T PRK08175 265 ----Y--HDYGTFTPLQVAAIAALEGDQ-QCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP----KASMYVWAKIPEPYAA 333 (395)
T ss_pred ----h--cccCCCcHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CEEEEEEEECCcccCC
Confidence 0 011122222223333333211 1267778888999999999999988776655 46678899987653
Q ss_pred -CHHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeec
Q 017726 318 -NSSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHL 351 (367)
Q Consensus 318 -~~~~l~~~L~~~~gv~v~~g~~--~~~~~~iRi~~~ 351 (367)
+..++++.|.+++||.+.+|.. ...++++||++.
T Consensus 334 ~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~ 370 (395)
T PRK08175 334 MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI 370 (395)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC
Confidence 4678988887778999999843 233468999974
No 115
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=228.80 Aligned_cols=333 Identities=15% Similarity=0.086 Sum_probs=237.2
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCCC-----------CCcHHHHHH-HHHHHHHHHhcCCCCceEEec---CChhHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPAVPALTK-TLLEDIKKIFKTTSGTPFLIP---TTGTGA 72 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~~~~~~-~~~~~la~~~~~~~~~~v~~~---~ggt~a 72 (367)
.+.+.++|+-..+++.+++++........ +....+..+ ..|+.+++++|+++++ +.++ +||+++
T Consensus 34 ~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~-~~~~~~~~sgt~a 112 (452)
T PTZ00094 34 IEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE-WGVNVQPYSGSPA 112 (452)
T ss_pred HcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc-ceeecCCCchHHH
Confidence 46778899999999999999998653221 112344455 4789999999997654 5555 789999
Q ss_pred HHHHHHccCCCCCeEEEEeCCcchHHHH--HHH------HHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEE
Q 017726 73 WESALTNTLSPGDRIISFLIGQFSLLWI--DQQ------QRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 73 l~~~~~~~~~~gd~vl~~~~~~~~~~~~--~~~------~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
+..++.+++++||+|++...+|.+.... ... ...++++..++.+.++.+|++++++++++ .+++++++.
T Consensus 113 n~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~---~~~~lvi~~ 189 (452)
T PTZ00094 113 NFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKA---FRPKLIIAG 189 (452)
T ss_pred HHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHH---hCCCEEEEe
Confidence 9999999999999999988888775421 110 01123344555666688999999999974 356777654
Q ss_pred ecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecccc---ccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE---WGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 145 ~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~---~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
++.+|...|+++|.++|++ +|+++++|++|++|..+.+... .++|++++|+|||+.||.| |+++++++..+.
T Consensus 190 --~s~~g~~~di~~I~~i~~~--~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~ 264 (452)
T PTZ00094 190 --ASAYPRDIDYKRFREICDS--VGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPD 264 (452)
T ss_pred --CCCCCCccCHHHHHHHHHH--cCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccchH
Confidence 3469999999999999999 9999999999999987654321 2689999999999999998 888887765443
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (367)
+........+. + +.++++...++++.++++.+...+.+++.++..+++++|.+.|++.|+++..+..
T Consensus 265 l~~~~~~~~~p-----------~--~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~ 331 (452)
T PTZ00094 265 IENKINEAVFP-----------G--LQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT 331 (452)
T ss_pred HHHhhccccCC-----------C--CCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Confidence 33211111110 1 1235778888999999999987778888999999999999999888888876432
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc-cCCCC----CCCcEEEEeecCCC------CHHHHHHhhhh
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-LGLNK----VAGKVFRIGHLGHL------NEVMFNFQLLF 365 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~-~g~~~----~~~~~iRi~~~~~~------~~~~~~~~~l~ 365 (367)
..+ ..++.+.. .+.+..++.+.| +++||.+. ++... ..++.+|+|++... ++.+.+.++|.
T Consensus 332 ~~~-~~~v~~~~-~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 332 DNH-LVLVDLRP-FGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred CCc-eEeecCCc-CCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 112 12233333 466777888888 55699994 44332 23467999985543 34455555554
No 116
>PLN03032 serine decarboxylase; Provisional
Probab=99.97 E-value=4.4e-28 Score=217.37 Aligned_cols=313 Identities=13% Similarity=0.100 Sum_probs=229.6
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCC---------CCcHHHHHHHHHHHHHHHhcCCCCc-eEEecCChhHHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR---------SPAVPALTKTLLEDIKKIFKTTSGT-PFLIPTTGTGAWESALT 78 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~---------~~~~~~~~~~~~~~la~~~~~~~~~-~v~~~~ggt~al~~~~~ 78 (367)
..++-+|--......+++++.++..... +....+..+++++++++++|.++++ +.+||+|||+|+..++.
T Consensus 24 ~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~ 103 (374)
T PLN03032 24 SVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGIL 103 (374)
T ss_pred hhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHH
Confidence 3445555555555556777766543211 1234677889999999999998654 25999999999998876
Q ss_pred ccC--CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH
Q 017726 79 NTL--SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (367)
Q Consensus 79 ~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~ 156 (367)
+.. .++..|+++..+|+|.. +.++.+|.+++.||++.++.+|+++|+++|++++ .+|.+|+++..+|.+|.+.|+
T Consensus 104 ~ar~~~~~~~vi~s~~~H~Sv~--kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~-~~~~lvv~tagtt~tG~idpi 180 (374)
T PLN03032 104 VGREVFPDGILYASRESHYSVF--KAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR-DKPAILNVNIGTTVKGAVDDL 180 (374)
T ss_pred HHHHhCCCcEEEeCCCceeHHH--HHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC-CCCEEEEEEecCcCCccCCCH
Confidence 532 34568888888888854 6688889999999999999999999999998654 367899999999999999999
Q ss_pred HHHHHHHHhcCCC-----cEEEEeeeeccCceee-------ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhcc
Q 017726 157 SKVRKLLDEYRHP-----ALFLVDGVSSICAIDF-------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (367)
Q Consensus 157 ~~i~~~~~~~~~~-----~~vi~D~~~~~~~~~~-------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~ 224 (367)
++|.++|++ +| +++++|++++.+..++ +.. .++|.++.|+||+++.|.|+|+++.+++.++.+..
T Consensus 181 ~eI~~i~~~--~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~ 257 (374)
T PLN03032 181 DRILRILKE--LGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQ 257 (374)
T ss_pred HHHHHHHHH--hCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhcc
Confidence 999999999 65 6999999998876664 433 36899999999998769999999999887765432
Q ss_pred CCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 017726 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (367)
...|+...+ ....++.+....+.++.++..+..+|+.++.+++.++++++.+.|++.++++.... .
T Consensus 258 ---~~~Yl~~~d--------~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p---~ 323 (374)
T PLN03032 258 ---NVEYLNSRD--------ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNE---L 323 (374)
T ss_pred ---CCcccCCCC--------CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECC---C
Confidence 112221111 11233455555688899999999999999999999999999999999987765531 2
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCH
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNE 356 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~ 356 (367)
+ ..++|+.| ..+. +.+++.+... ...+|+......+.
T Consensus 324 ~-~~V~f~~~---~~~~----~~~~w~l~~~-------~~~~hi~vm~~~~~ 360 (374)
T PLN03032 324 S-STVVFERP---MDEA----FIKKWQLACE-------GDIAHVVVMPNVTV 360 (374)
T ss_pred c-eEEEEcCC---CcHh----Hhheeeeccc-------CCEEEEEECCCCCH
Confidence 3 35666654 1111 3233333321 23799988876664
No 117
>PLN02656 tyrosine transaminase
Probab=99.97 E-value=2.9e-28 Score=225.14 Aligned_cols=303 Identities=15% Similarity=0.080 Sum_probs=210.6
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.++|+.+.+++.+.... ..+|.......++|+.++++++. . .+++|++|+|+++++..++.+++.+||+|+++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~ 126 (409)
T PLN02656 47 FHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLP 126 (409)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEe
Confidence 36678888888774332 22344345567888888888752 1 23469999999999999999889999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
+|.|..+. ..++..|++++.+++.. ++.+|+++++++++ ++++++++++|+||||.+++ +++|.++|++
T Consensus 127 ~p~y~~~~--~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~----~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~ 200 (409)
T PLN02656 127 RPGFPIYE--LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD----QNTVALVIINPGNPCGNVYSYQHLKKIAETAEK 200 (409)
T ss_pred CCCCCcHH--HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc----cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99876543 44666899999999853 45789999999887 46799999999999999975 6778888888
Q ss_pred cCCCcEEEEeeeeccCcee----ec---cccccceEEEecCCCcccCCCc--ceeeeeC--------HHHHHHhccCCCC
Q 017726 166 YRHPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALSLPTG--MGIVCAS--------PKALEASKTAKSV 228 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~--------~~~~~~~~~~~~~ 228 (367)
++++||+|++|...... .+ .......+++.|+||.+. .+| +|+++++ +++++++.....
T Consensus 201 --~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~-~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~- 276 (409)
T PLN02656 201 --LKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWI-VPGWRLGWFVTTDPSGSFRDPKIVERIKKYFD- 276 (409)
T ss_pred --cCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhcc-CcceeEEEEEEeCcccccccHHHHHHHHHHHh-
Confidence 99999999998743321 11 112234688899999864 444 6999984 466666543210
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcc-ccCCCccCCC
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN-CTQKEEWFSD 306 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~ 306 (367)
. ...++.....++..+++...+.-+++.++.++++++.+.+.|+++ ++.. ..| .++
T Consensus 277 ------------~------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p----~gg 334 (409)
T PLN02656 277 ------------I------LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP----EGS 334 (409)
T ss_pred ------------h------hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC----CeE
Confidence 0 011344333333334432111127777888899999999999887 3332 234 466
Q ss_pred ceEEEEcCCC----C-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 307 TVTAVIVPSH----I-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 307 ~~~~~~~~~~----~-~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
.++|++++.. . +..+++..+.++.||.+.||..+...+++||++..
T Consensus 335 ~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~ 385 (409)
T PLN02656 335 MAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA 385 (409)
T ss_pred EEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC
Confidence 7788887421 2 34566655556679999998655456789999765
No 118
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.6e-28 Score=222.96 Aligned_cols=279 Identities=15% Similarity=0.162 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCC
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (367)
..++|+.+++++|++++ +|++|+|+++++..++.+++.+| |.|+++.|.|..+ ...++..|++++.++++.++.+|
T Consensus 62 ~~~Lr~aia~~~~~~~~-~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y--~~~~~~~g~~v~~v~~~~~~~~~ 138 (354)
T PRK04635 62 PPELINAYSAYAGVAPE-QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMY--AISAETFNVGVKALPLTADYQLP 138 (354)
T ss_pred HHHHHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHH--HHHHHHcCCEEEEEecCCCCCCC
Confidence 57899999999999775 49999999999999999988898 8999999976543 35578899999999998777889
Q ss_pred HHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---cc-ccccceEEEec
Q 017726 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---RM-DEWGIDVALTG 198 (367)
Q Consensus 123 ~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~~-~~~~~d~~~~s 198 (367)
++.+++ + +++|+|++|+|+||||.++|.+++.++++.. .+++||+|++|....... +. .....-+++.|
T Consensus 139 ~~~l~~-~-----~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~-~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S 211 (354)
T PRK04635 139 LDYIEQ-L-----DGAKLVFICNPNNPTGTVIDRADIEQLIEMT-PDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRT 211 (354)
T ss_pred HHHHHh-c-----cCCCEEEEeCCCCCCCccCCHHHHHHHHHhC-CCcEEEEeCchHhhccCcchHHHHhhCCCEEEEec
Confidence 988863 3 3679999999999999999999999999873 269999999986443111 11 11123478899
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC---hHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LEN 273 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g---~~~ 273 (367)
+||+++ .+| +|++++++++++.+..... ++..+.. ...+++..+.+.+ +++
T Consensus 212 ~SK~~~-l~GlRlG~~i~~~~~~~~l~~~~~--------------------~~~~~~~---~~~~a~~~l~~~~~~~~~~ 267 (354)
T PRK04635 212 LSKAFA-LAGARCGFTLANEELIEILMRVIA--------------------PYPVPLP---VSEIATQALSEAGLARMKF 267 (354)
T ss_pred hHHHhh-hhHHHHhhhhCCHHHHHHHHhhcC--------------------CCCCCHH---HHHHHHHHHhcccHHHHHH
Confidence 999984 555 6999999999887763211 1223332 2233444444433 445
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 274 VIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
.++.+.++++.+.+.|++++ +.+..+ .+ .+++++++ +..++.+.|. ++||.++.+..+..++++||++ +
T Consensus 268 ~~~~~~~~r~~l~~~L~~~~~~~~~~~----~g-~f~~~~~~---~~~~~~~~l~-~~gv~v~~~~~~~~~~~lRis~-~ 337 (354)
T PRK04635 268 QVLDLNAQGARLQAALSMYGGAKVLEG----NG-NYVLAKFD---DVDAVFKALW-DAGIVARAYKDPRLANCIRFSF-S 337 (354)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceECCC----CC-cEEEEECC---CHHHHHHHHH-HCCEEEEECCCCCCCCeEEEEe-C
Confidence 56677888899999999984 776654 23 46777774 4678888775 5699998654333456899994 6
Q ss_pred CCCHHHHHHhhhhc
Q 017726 353 HLNEVMFNFQLLFQ 366 (367)
Q Consensus 353 ~~~~~~~~~~~l~~ 366 (367)
..++.+.+.++|++
T Consensus 338 ~~e~~~~l~~al~~ 351 (354)
T PRK04635 338 NRAETDKLIGLIRN 351 (354)
T ss_pred CHHHHHHHHHHHHH
Confidence 67777777777764
No 119
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=4.7e-28 Score=221.37 Aligned_cols=298 Identities=14% Similarity=0.070 Sum_probs=207.1
Q ss_pred CCCChHHHHHHHccCCCC---CCCCcHHHHHHHHHHHHHHHhc--------CCCCceEEecCChhHHHHHHHHccCCCCC
Q 017726 17 PVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFK--------TTSGTPFLIPTTGTGAWESALTNTLSPGD 85 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~~--------~~~~~~v~~~~ggt~al~~~~~~~~~~gd 85 (367)
|.++|+.+.+++.+.... ...|. .....++|+.++++++ +++ ++|++|+|+++++..++.+++.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~-~~I~it~Ga~~al~~~~~~~~~~g~ 116 (374)
T PRK02610 39 PYDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITP-ANISVGNGSDELIRSLLIATCLGGE 116 (374)
T ss_pred CCCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCH-HHEEEcCChHHHHHHHHHHHcCCCC
Confidence 456788899988763222 11222 2456789999999997 444 4599999999999887777677776
Q ss_pred -eEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 86 -RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 86 -~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
+|+++.|.|..+ ...++..|++++.++.+. ++.+|++++++++++...+++|+|++++||||||.+++.+++.+++
T Consensus 117 ~~Vlv~~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~ 194 (374)
T PRK02610 117 GSILVAEPTFSMY--GILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLR 194 (374)
T ss_pred CeEEEcCCChHHH--HHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 899999977654 366788999999999865 3689999999998741113689999999999999999998888876
Q ss_pred HhcCCCcEEEEeeeeccCceee---ccccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 164 DEYRHPALFLVDGVSSICAIDF---RMDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+- .++++||+|++|....... .......-+++.|+||.++ ...++|++++++++++++.....
T Consensus 195 ~~-~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~------------ 261 (374)
T PRK02610 195 SL-PEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRL------------ 261 (374)
T ss_pred hc-cCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcC------------
Confidence 53 3689999999987442211 1111123578899999993 22336999999999888765321
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCC
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
.++.+.....+...++...... ++.+ ++..+.++.+.+.|+++ ++.+.+ ..+.++|++++.+.+
T Consensus 262 --------~~~~~~~~q~a~~~~l~~~~~~-~~~~-~~~~~~r~~l~~~L~~~~~~~~~p-----~~g~f~~~~l~~~~~ 326 (374)
T PRK02610 262 --------PYNLPSFSQLAAQLALEHRQEL-LAAI-PEILQERDRLYQALQELPQLRVWP-----SAANFLYLRLSQDAA 326 (374)
T ss_pred --------CCCCCHHHHHHHHHHhcCHHHH-HHHH-HHHHHHHHHHHHHHHhCCCcEeCC-----CcceEEEEeCCCCCC
Confidence 1223443334444444332221 3333 33444577788888877 665543 345678888876667
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
..++++.|. ++||.++++ .+++||++..
T Consensus 327 ~~~~~~~l~-~~gi~v~~~-----~~~lRls~~~ 354 (374)
T PRK02610 327 LAALHQALK-AQGTLVRHT-----GGGLRITIGT 354 (374)
T ss_pred HHHHHHHHH-HCCEEEEeC-----CCeEEEeCCC
Confidence 889999985 559999753 3579999643
No 120
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.97 E-value=4.1e-28 Score=225.26 Aligned_cols=325 Identities=16% Similarity=0.132 Sum_probs=225.2
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCCC-----------CCcHHHHHHH-HHHHHHHHhcCCCCceEEecCChhHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYR-----------SPAVPALTKT-LLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~~~~~~~-~~~~la~~~~~~~~~~v~~~~ggt~al~~ 75 (367)
.+.+.+.+++.++++.|++++.+...... +....+..++ +++.+++++|.+... +++ +||+.|+..
T Consensus 25 ~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~-i~~-~sgt~al~~ 102 (416)
T PRK00011 25 EEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYAN-VQP-HSGSQANAA 102 (416)
T ss_pred hcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCcee-eec-CCchHHHHH
Confidence 46678889999999999999977532111 1122333444 577999999998643 544 567899999
Q ss_pred HHHccCCCCCeEEEEeCCcchHH--H-HHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 76 ALTNTLSPGDRIISFLIGQFSLL--W-IDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 76 ~~~~~~~~gd~vl~~~~~~~~~~--~-~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
++.+++++||+|+++.+.|.++. + .......|.+++.++.+. ++.+|++++++++++ +++++|++++++ +|
T Consensus 103 ~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~---~~~k~v~~~~~~--~~ 177 (416)
T PRK00011 103 VYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALE---HKPKLIIAGASA--YS 177 (416)
T ss_pred HHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHh---cCCCEEEECCCc--CC
Confidence 99999999999999999876532 1 111233467888888763 478999999999974 357898887544 56
Q ss_pred ccccHHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCCcceeeeeC-HHHHHHhccC
Q 017726 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTA 225 (367)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~-~~~~~~~~~~ 225 (367)
...|+++|.++|++ +|+++++|++|+.+.. +.++. ++|++++|+||+++|+.| |+++.+ +++.+++...
T Consensus 178 ~~~~~~~I~~la~~--~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~ 252 (416)
T PRK00011 178 RPIDFKRFREIADE--VGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSA 252 (416)
T ss_pred CccCHHHHHHHHHH--cCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHH
Confidence 67899999999999 9999999999876543 22333 679999999999987776 777775 6877777543
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (367)
... +. ..++....++++..++....++++++++++..++++++++.|+++|+++.. .. ..
T Consensus 253 ~~~---------------~~--~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~--~~ 312 (416)
T PRK00011 253 VFP---------------GI--QGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVS-GG--TD 312 (416)
T ss_pred hCc---------------cc--cCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeee-cC--CC
Confidence 211 11 123444455565556655555567888999999999999999999887654 11 12
Q ss_pred CceEEEEcCC-CCCHHHHHHHHHhhCCeEEccCCCC------CCCcEEEEeecC------CCCHHHHHHhhhh
Q 017726 306 DTVTAVIVPS-HINSSEIVRRAWQRYNLSLGLGLNK------VAGKVFRIGHLG------HLNEVMFNFQLLF 365 (367)
Q Consensus 306 ~~~~~~~~~~-~~~~~~l~~~L~~~~gv~v~~g~~~------~~~~~iRi~~~~------~~~~~~~~~~~l~ 365 (367)
.+++++.+++ +.+..++.+.|. +.||.+..+..+ ..+..+|++... +.++.+...++|+
T Consensus 313 ~~~~~i~~~~~~~~~~~~~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~ 384 (416)
T PRK00011 313 NHLVLVDLRSKGLTGKEAEAALE-EANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIA 384 (416)
T ss_pred CeEEEEeCcccCCCHHHHHHHHH-HcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence 3567777742 346678888885 559999854322 223569997532 2344555555554
No 121
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.97 E-value=2.2e-28 Score=226.15 Aligned_cols=317 Identities=14% Similarity=0.091 Sum_probs=203.1
Q ss_pred CChHHHHHHHccCCC------CCCCCcHHHHHHHHHHHHHHHh------cCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 19 HIPDQVIRAMNRNNE------DYRSPAVPALTKTLLEDIKKIF------KTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~------~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
++++.+.+++.+... ...+|.......++|+.+++++ ++++ ++|++|+|+++++.++. .++.+||+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-~~I~it~Ga~~al~~l~-~~~~~gd~ 124 (409)
T PRK07590 47 PLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISA-DEIFISDGAKCDTGNIL-DIFGPDNT 124 (409)
T ss_pred CCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCCh-hhEEECCCHHHHHHHHH-HhcCCCCE
Confidence 355666666655322 1223434455678899998876 3444 46999999999998764 55689999
Q ss_pred EEEEeCCcchHHHHHHHHHhCCc-----------eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFN-----------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
|++.+|.|+.+. ..++..|.+ ++.++++.++.+.++ + .+ +++|+|++++|+||||.+++
T Consensus 125 V~v~~P~Y~~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~----~~---~~~k~i~l~nP~NPTG~~~s 194 (409)
T PRK07590 125 IAVTDPVYPVYV--DTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-L----PE---EKVDIIYLCFPNNPTGTVLT 194 (409)
T ss_pred EEEeCCCCcchH--HHHHHcCCcccccccccccceeEeecccccCCccc-C----cc---cCceEEEEeCCCCCcCCcCC
Confidence 999999887754 556778876 888888643323222 1 11 36799999999999999997
Q ss_pred H---HHHHHHHHhcCCCcEEEEeeeeccCcee----ecc---ccc-cceEEEecCCCccc-CCCcceeeeeCHHHHHHhc
Q 017726 156 L---SKVRKLLDEYRHPALFLVDGVSSICAID----FRM---DEW-GIDVALTGSQKALS-LPTGMGIVCASPKALEASK 223 (367)
Q Consensus 156 ~---~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~~~---~~~-~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~ 223 (367)
. ++|.++|++ ++++||+|++|...... ... ... +..+++.|+||.++ ....+|++++++++++++.
T Consensus 195 ~~~~~~l~~~a~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~ 272 (409)
T PRK07590 195 KEQLKAWVDYAKE--NGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTS 272 (409)
T ss_pred HHHHHHHHHHHHH--cCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhcc
Confidence 5 457777888 99999999998743211 111 111 23578899999994 2333799999999886432
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (367)
...... ............ ....+.....++..++..-...-+++.++.++++++.+.+.|++.|+.+..+
T Consensus 273 ~~~~~~----~~~~~~~~~~~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~---- 342 (409)
T PRK07590 273 DGEGVS----LNSLWNRRQSTK--FNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGG---- 342 (409)
T ss_pred ccchhh----hHHHHHHHHhhc--ccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecC----
Confidence 100000 000000000010 1123433333333333211111266778888999999999999988776654
Q ss_pred CCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHH
Q 017726 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~ 359 (367)
.++.++|++++++.+..++++.|.+++||.+.+|..+ ...+++||++....++.+.
T Consensus 343 ~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~ 400 (409)
T PRK07590 343 VNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLE 400 (409)
T ss_pred CcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHH
Confidence 4566889999766777889998887789999988533 2346899996443333333
No 122
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.3e-28 Score=223.95 Aligned_cols=303 Identities=15% Similarity=0.133 Sum_probs=212.0
Q ss_pred CCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhc-----CCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 18 VHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFK-----TTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.++++.+.+++.+.......|.......++|+.++++++ .++ ++|++|+|+++++..++.+++.+||+|++++|
T Consensus 42 ~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p 120 (397)
T PRK07568 42 IKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEP-DEILITNGGSEAILFAMMAICDPGDEILVPEP 120 (397)
T ss_pred CCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCc-ceEEEcCChHHHHHHHHHHhcCCCCEEEEecC
Confidence 356788888887643332334334556789999998884 344 46999999999999999888899999999998
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCCC--CC-CCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDWG--EG-AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~--~~-~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
.|... ...++..|++++.++.+.+ +. .++++++++++ +++++|++++|+||||.+++ +++|.++|++
T Consensus 121 ~y~~~--~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~----~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~- 193 (397)
T PRK07568 121 FYANY--NGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT----PKTKAILISNPGNPTGVVYTKEELEMLAEIAKK- 193 (397)
T ss_pred CCccH--HHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC----ccceEEEEECCCCCCCccCCHHHHHHHHHHHHH-
Confidence 66543 3456778999999998632 23 25789998887 46799999999999999986 6778888888
Q ss_pred CCCcEEEEeeeeccCcee-------ecccc-ccceEEEecCCCcccC-CCcceeeeeC-HHHHHHhccCCCCceeechHH
Q 017726 167 RHPALFLVDGVSSICAID-------FRMDE-WGIDVALTGSQKALSL-PTGMGIVCAS-PKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~-------~~~~~-~~~d~~~~s~~K~~~g-~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (367)
+|+++++|+++...... ..... ....+++.|+||.++. ..++|+++++ +++++.+.....
T Consensus 194 -~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~--------- 263 (397)
T PRK07568 194 -HDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQ--------- 263 (397)
T ss_pred -CCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhh---------
Confidence 99999999998643211 11111 2345888999999852 2347998874 677766542110
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
. .++++.....++..++.... .-++++++.++++++.+.+.|+++ ++.+..+ .++.++|++++.
T Consensus 264 -------~---~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p----~g~~~~~~~l~~ 328 (397)
T PRK07568 264 -------A---RLSPPTLEQIGAAALLDTPE-SYFDEVREEYKKRRDILYEELNKIPGVVCEKP----KGAFYIIAKLPV 328 (397)
T ss_pred -------c---cCCCCcHHHHHHHHHhhCCH-HHHHHHHHHHHHHHHHHHHHHhcCCCceecCC----CcceEEEEecCC
Confidence 0 11233333344444443221 226777888999999999999887 6666555 456667888854
Q ss_pred CCCHHHHHHHHHhh-----CCeEEccCCCC-----CCCcEEEEeecCCC
Q 017726 316 HINSSEIVRRAWQR-----YNLSLGLGLNK-----VAGKVFRIGHLGHL 354 (367)
Q Consensus 316 ~~~~~~l~~~L~~~-----~gv~v~~g~~~-----~~~~~iRi~~~~~~ 354 (367)
. +..++.++|.++ +||.+.+|..+ ..++++||++....
T Consensus 329 ~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~ 376 (397)
T PRK07568 329 D-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNE 376 (397)
T ss_pred C-CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCH
Confidence 3 678899988764 69999998432 12468999976443
No 123
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=4.5e-28 Score=220.41 Aligned_cols=311 Identities=15% Similarity=0.106 Sum_probs=212.3
Q ss_pred CcccccC--CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 9 KNHLFVP--GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 9 ~~~~~~~--~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
+.+.+.- .|.++++.+.+++.+......+|. .....++|+.++++++++++ +|++|+|+++++..++.+++++||.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~~~~lr~~ia~~~~~~~~-~I~it~G~~~al~~~~~~~~~~gd~ 108 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAERVHSYP-KASHADLTAALADRWDVSPE-QVWLANGGDGALDYLARAMLDPGDT 108 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCC-CCCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHHhcCCCCE
Confidence 3444443 345667778888776433222222 13466899999999998764 5999999999999999999999999
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
|++++|.|..+. ..++..|.+++.++++. ++.++.+++.+... ++|+|++++||||||.+++.+++.++++
T Consensus 109 V~v~~P~y~~~~--~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~k~i~l~~p~NPTG~~~s~~~~~~l~~ 181 (357)
T PRK14809 109 VLVPDPGFAYYG--MSARYHHGEVREYPVSKADDFEQTADTVLDAYD-----GERIVYLTSPHNPTGSEIPLDEVEALAE 181 (357)
T ss_pred EEEeCCChHHHH--HHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-----CCcEEEEeCCCCCCCcCCCHHHHHHHHH
Confidence 999999765432 34566788888888753 35567777766542 5699999999999999999999888887
Q ss_pred hcCCCcEEEEeeeeccCceeec----cccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 165 EYRHPALFLVDGVSSICAIDFR----MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~~~----~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
..+++++||+|++|........ .......+++.|+||.++ ...++|++++++++++++.....
T Consensus 182 ~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~------------ 249 (357)
T PRK14809 182 RTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNT------------ 249 (357)
T ss_pred hCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhCC------------
Confidence 7434789999999875432111 111234688899999994 22337999999999888764311
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
++..+.. +..+++..+.+.+ +++.++.++++++.+.+.|+..+ .. ..+.+++++++ +
T Consensus 250 --------~~~~~~~---~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~-----~~g~f~~~~~~---~ 307 (357)
T PRK14809 250 --------PFAASEL---ACRAGLAALDDDEHVERTVETARWAREYIREELDAPT---WE-----SAGNFVLAEVG---D 307 (357)
T ss_pred --------CCCCCHH---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc---CC-----CCCCEEEEECC---C
Confidence 2223432 3344444443322 56667777777777877775432 22 24456777773 5
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
..++++.|. ++||.+.+|..+..++++||++. ..++.+...+.|
T Consensus 308 ~~~~~~~l~-~~gv~v~~g~~f~~~~~iRls~~-~~~~~~~~l~~L 351 (357)
T PRK14809 308 ASAVAEAAQ-ERGVIVRDCTSFGLPECIRITCG-TREETERAVEVL 351 (357)
T ss_pred HHHHHHHHH-HCCEEEEECccCCCCCeEEEecC-CHHHHHHHHHHH
Confidence 678999885 55999999865544578999964 333333333333
No 124
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.97 E-value=5.5e-28 Score=219.02 Aligned_cols=318 Identities=14% Similarity=0.129 Sum_probs=224.1
Q ss_pred cCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCC--------
Q 017726 14 VPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD-------- 85 (367)
Q Consensus 14 ~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd-------- 85 (367)
.-|-+.+|+++++++.+..... ....+..+++++.+++++|.+. +++++|+|.|+++++.+++.+||
T Consensus 19 ~~g~s~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~a~~~g~~~---~~~~~g~t~al~~al~al~~~Gd~~~~~~~~ 93 (363)
T TIGR01437 19 ILGVSTVSDEVADAQKRGAQNY--FEIKELVNKTGEYIANLLGVED---AVIVSSASAGIAQSVAAVITRGNRYLVENLH 93 (363)
T ss_pred cCCCCCCCHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHhhCCCe---EEEEcCHHHHHHHHHHHHhcCCCcchhhccc
Confidence 3455669999999999975432 2355778999999999999763 78999999999999999888888
Q ss_pred -------eEEEEeCCcchH--HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEE-EEecCCCcccccc
Q 017726 86 -------RIISFLIGQFSL--LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC-IVHNETATGVTNN 155 (367)
Q Consensus 86 -------~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~-~~~~~n~tG~~~~ 155 (367)
+|+++.+.++.+ .+...+...|++++.++. ++.+|+++++++++ ++|++++ +++++||+|.+.|
T Consensus 94 ~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~----~~t~ai~~v~~~~~~~g~~~~ 167 (363)
T TIGR01437 94 DSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT----EKTAAILYIKSHHCVQKSMLS 167 (363)
T ss_pred ccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC----hhceEEEEEecCCCCcCCcCC
Confidence 888877533322 134566778999998876 45689999999998 4668765 5678899999999
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechH
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+++|.++|++ +|+++++|++|+... . .....++|++++|+||++.||. .|+++.++++++.+....... .
T Consensus 168 ~~~i~~~a~~--~gi~vivD~a~~~~~-~-~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~-~---- 237 (363)
T TIGR01437 168 VEDAAQVAQE--HNLPLIVDAAAEEDL-Q-KYYRLGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGI-G---- 237 (363)
T ss_pred HHHHHHHHHH--cCCeEEEECCCCCch-H-HHHHcCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCC-c----
Confidence 9999999999 999999999997311 1 1123468999999999998888 699999988887764322110 0
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc-cCC--CceEEE
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE-WFS--DTVTAV 311 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~--~~~~~~ 311 (367)
..++.+ + ..++++.++++.+.+.+.+.+. ...++++++.+.|+++ |+.+..+.+. ... ...+.|
T Consensus 238 ---~~~~~~-----~---~~~~gl~aAl~~~~~~~~~~~~-~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~ 305 (363)
T TIGR01437 238 ---RAMKVG-----K---ENILGLTAALEQYLSTGKESGA-EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRF 305 (363)
T ss_pred ---ceeccC-----H---HHHHHHHHHHHHHHccCcccHH-HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEE
Confidence 111122 2 2357888899988776644433 3445677899999997 8877643111 011 122334
Q ss_pred EcC-CCCCHHHHHHHHHhh-CCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhhc
Q 017726 312 IVP-SHINSSEIVRRAWQR-YNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLFQ 366 (367)
Q Consensus 312 ~~~-~~~~~~~l~~~L~~~-~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~~ 366 (367)
... .+.+..++.++|.++ .+|.+++- +.....+|++... ..++.|.+.++|.+
T Consensus 306 ~~~~~g~~~~~l~~~L~~~~~~I~~r~~--~~~~~~~~l~~~~~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 306 DESELGMTAADVVQALRQGEPAIYTRGY--KANEGIIEIDPRSVTGGQLDIIVERIRE 361 (363)
T ss_pred eccCCCCCHHHHHHHHhcCCCCEEEeee--eecCCeEEEEeecCCHHHHHHHHHHHHH
Confidence 431 367889999999653 23666542 2334567777654 33456666666654
No 125
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.1e-28 Score=223.26 Aligned_cols=302 Identities=16% Similarity=0.103 Sum_probs=206.2
Q ss_pred ChHHHHHHHccCCCC-CCCCcH----HHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 20 IPDQVIRAMNRNNED-YRSPAV----PALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~----~~~~~~~~~~la~~~~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
.++.+.+++.+.... ...|.. .+..+++.+.+++.+|.+ .+++|++|+|+++|+..++.+++++||.|++++|.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~ 126 (402)
T PRK06107 47 TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPY 126 (402)
T ss_pred CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 356677776664321 112222 233444444445555664 34569999999999999998889999999999996
Q ss_pred cchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhcCC
Q 017726 94 QFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRH 168 (367)
Q Consensus 94 ~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~~~ 168 (367)
|+.+. ......+..++.++.+. ++.+|++++++++. ++++++++++|+||||.+++. +++.++|++ +
T Consensus 127 y~~y~--~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~--~ 198 (402)
T PRK06107 127 WVSYP--DMVLANDGTPVIVACPEEQGFKLTPEALEAAIT----PRTRWLILNAPSNPTGAVYSRAELRALADVLLR--H 198 (402)
T ss_pred CcCHH--HHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC----cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHH--c
Confidence 66543 33455677777887753 35688999999886 467999999999999999975 556777777 7
Q ss_pred -CcEEEEeeeeccCce---ee-cc-----ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 169 -PALFLVDGVSSICAI---DF-RM-----DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 169 -~~~vi~D~~~~~~~~---~~-~~-----~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++++|+|++|+.... +. .+ ...+..+++.|+||.++ .+| +|++++++++++.+.....
T Consensus 199 ~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~pGlRiG~~~~~~~~~~~~~~~~~--------- 268 (402)
T PRK06107 199 PHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYA-MTGWRIGYAAGPADLIAAINKLQS--------- 268 (402)
T ss_pred CCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhc-CcccceeeeecCHHHHHHHHHHHH---------
Confidence 999999999864211 11 11 11135688889999994 455 6999999999887764311
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcC-
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVP- 314 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~- 314 (367)
. ..+.++.....++..++..- +.-+++.++.+.++++.+.+.|++. |+.+..+ .+++++|++++
T Consensus 269 -------~--~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p----~gg~~~~~~~~~ 334 (402)
T PRK06107 269 -------Q--SSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNAIPGLSCLVP----DGAFYLYVNCAG 334 (402)
T ss_pred -------h--cccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC----CcceEEeeeccc
Confidence 0 01234443333333343211 1116777888899999999999887 7777665 46667777762
Q ss_pred -------CC---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCC
Q 017726 315 -------SH---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 353 (367)
Q Consensus 315 -------~~---~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~ 353 (367)
.+ .+..++++.|.+++||.+.+|..+...+++||++...
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~ 383 (402)
T PRK06107 335 LIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATS 383 (402)
T ss_pred ccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCC
Confidence 11 1456888888777899999996654467899998753
No 126
>PRK06855 aminotransferase; Validated
Probab=99.97 E-value=8.2e-28 Score=223.31 Aligned_cols=306 Identities=13% Similarity=0.036 Sum_probs=206.6
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.++|+.+.+++.+.... ...|.......++|+.+++++ |.+ .+++|++|+|+++++..++. ++.+||.|++.
T Consensus 47 ~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~ 125 (433)
T PRK06855 47 EKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLRREARVIGP 125 (433)
T ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcCCCCeEEEe
Confidence 36777777777664322 223444456678888888887 432 33569999999999998875 78999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
.|.|+.+.. ......|++++.+++++ ++.+|+++++++++.. ++++++++++|+||||.+++ +++|.++|++
T Consensus 126 ~P~Y~~~~~-~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~--~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~ 202 (433)
T PRK06855 126 SPAYSTHSS-AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN--PSIAGILLINPDNPTGAVYPKEILREIVDIARE 202 (433)
T ss_pred CCCCchHHH-HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC--CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 998876432 12334588888888764 3568999999998742 25799999999999999998 4567777888
Q ss_pred cCCCcEEEEeeeeccCcee----ec---cccccceEEEecCCCccc-CCCcceeeeeC-----H---HHHHHhccCCCCc
Q 017726 166 YRHPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALS-LPTGMGIVCAS-----P---KALEASKTAKSVR 229 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~-----~---~~~~~~~~~~~~~ 229 (367)
+|++||+|++|...... .+ ....+..+++.|+||.++ ....+|+++++ + ++++.+....
T Consensus 203 --~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~--- 277 (433)
T PRK06855 203 --YDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAK--- 277 (433)
T ss_pred --cCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhh---
Confidence 99999999998754321 11 111123588999999994 33447999973 2 1222221110
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCc
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDT 307 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 307 (367)
. . ...++.....++..++..-. +.-+++.++.++++++.+.+.|++. |+.+..+ .+++
T Consensus 278 ------------~-~---~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p----~gg~ 337 (433)
T PRK06855 278 ------------M-I---EVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRT----NGAF 337 (433)
T ss_pred ------------c-c---ccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCC----CeeE
Confidence 0 0 01133333333333332210 1116777888899999999999887 7766666 5677
Q ss_pred eEEEEcCCCC---------------------------CHHHHHHHHHhhCCeEEccCCCCC-CCcEEEEeecC
Q 017726 308 VTAVIVPSHI---------------------------NSSEIVRRAWQRYNLSLGLGLNKV-AGKVFRIGHLG 352 (367)
Q Consensus 308 ~~~~~~~~~~---------------------------~~~~l~~~L~~~~gv~v~~g~~~~-~~~~iRi~~~~ 352 (367)
++|+++|++. +..+++..+.++.||.+.||..+. .+..+||++..
T Consensus 338 ~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~ 410 (433)
T PRK06855 338 YMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE 410 (433)
T ss_pred EEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC
Confidence 8889887542 356777777778899999995542 23459999865
No 127
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=6.6e-28 Score=222.63 Aligned_cols=310 Identities=14% Similarity=0.063 Sum_probs=207.2
Q ss_pred CCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEE
Q 017726 18 VHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISF 90 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~ 90 (367)
.++|+.+.+++.+.... ...|.......++|+.++++++ .+ .+++|++|+|+++++..++.+++++||.|+++
T Consensus 48 ~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~ 127 (409)
T PLN00143 48 FRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLP 127 (409)
T ss_pred CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEc
Confidence 47788888877764332 1224333556678888888873 22 33569999999999999999999999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
.|.|+.+. ..++..|.+++.+++. .++.+|+++++++++ ++++++++++||||||.+++ +++|.++|++
T Consensus 128 ~P~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~ 201 (409)
T PLN00143 128 RPGFPDVE--TYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD----ENTIAMVIINPGNPCGSVYSYEHLNKIAETARK 201 (409)
T ss_pred CCCCcCHH--HHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc----cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHH
Confidence 99877643 5567789999999874 346789999999886 46799999999999999998 5667778888
Q ss_pred cCCCcEEEEeeeeccCcee----ec---cccccceEEEecCCCcccCCCc--ceeeeeC-H-HHHHHhccCCCCceeech
Q 017726 166 YRHPALFLVDGVSSICAID----FR---MDEWGIDVALTGSQKALSLPTG--MGIVCAS-P-KALEASKTAKSVRVFFDW 234 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~----~~---~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~-~-~~~~~~~~~~~~~~~~~~ 234 (367)
++++||+|++|...... .+ .......+++.|+||.++ .+| +|+++++ + .+++.+...
T Consensus 202 --~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~-~pGlRvG~~v~~~p~~~~~~~~~~--------- 269 (409)
T PLN00143 202 --LGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWM-IPGWGLGWLVTCDPSGLLQICEIA--------- 269 (409)
T ss_pred --cCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcC-CCccceEEEEeeCchhhhhhHHHH---------
Confidence 99999999998753321 11 111124588999999963 444 6999983 4 332211100
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCcc-c-cCCCccCCCceEEEE
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN-C-TQKEEWFSDTVTAVI 312 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~-~-~~~~~~~~~~~~~~~ 312 (367)
....+.. .. ..+ ++.....++..++....+.-+++.+++++++.+.+.+.|++++... . .| .+++++|++
T Consensus 270 -~~~~~~~-~~-~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p----~gg~f~w~~ 341 (409)
T PLN00143 270 -DSIKKAL-NP-APF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKA----EGAFFALVK 341 (409)
T ss_pred -HHHHHHH-hc-cCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC----CeeEEEEEe
Confidence 0000000 00 011 2332223333333211011266778888888888999998874222 1 23 466788888
Q ss_pred cCC----CC-CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCC
Q 017726 313 VPS----HI-NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH 353 (367)
Q Consensus 313 ~~~----~~-~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~ 353 (367)
++. +. +..++++.+.++.||.+.+|..+...+++||++...
T Consensus 342 l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~ 387 (409)
T PLN00143 342 LNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVE 387 (409)
T ss_pred cchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCC
Confidence 853 22 466787777667799999996655567899997643
No 128
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=6.5e-28 Score=225.26 Aligned_cols=282 Identities=15% Similarity=0.101 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHhcC------C-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHH-HhCCceEEE
Q 017726 42 ALTKTLLEDIKKIFKT------T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQ-RLNFNVDVV 113 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~------~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v 113 (367)
....++|+.++++++. + ++++|++|+|+++++..++.++++|||.|++++|.|..+. ..+. ..|++++.+
T Consensus 86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~--~~~~~~~g~~~v~v 163 (468)
T PLN02450 86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFD--RDLKWRTGVEIVPI 163 (468)
T ss_pred CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchH--HHHhhcCCcEEEEE
Confidence 4456788888888851 1 3356999999999999999999999999999999776653 2234 579999999
Q ss_pred eCC--CCCCCCHHHHHHHHhcc---CCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCce--
Q 017726 114 ESD--WGEGAKLDVLASKLAAD---TAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI-- 183 (367)
Q Consensus 114 ~~~--~~~~~d~e~l~~~i~~~---~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~-- 183 (367)
+++ .++.+|++++++++.+. + .++|+|++++||||||.+++ +++|.++|++ ++++||+|++|+....
T Consensus 164 ~~~~~~~~~~~~~~le~~~~~~~~~~-~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~--~~~~iI~DE~Y~~~~f~~ 240 (468)
T PLN02450 164 HCSSSNGFQITESALEEAYQQAQKLN-LKVKGVLITNPSNPLGTTTTRTELNLLVDFITA--KNIHLISDEIYSGTVFDS 240 (468)
T ss_pred ecCCccCCcCCHHHHHHHHHHHHhcC-CCeeEEEEecCCCCCCcccCHHHHHHHHHHHHH--CCcEEEEEccccccccCC
Confidence 985 34567889999888641 1 37899999999999999997 4567777888 9999999999874221
Q ss_pred -ee----ccc---------cccceEEEecCCCccc-CCCcceeeeeCHHH-HHHhccCCCCceeechHHHHHHhhcCCcc
Q 017726 184 -DF----RMD---------EWGIDVALTGSQKALS-LPTGMGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 184 -~~----~~~---------~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
++ ... .....+++.|+||.++ ....+|+++++++. ++.+.... .
T Consensus 241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~------------------~-- 300 (468)
T PLN02450 241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS------------------S-- 300 (468)
T ss_pred CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh------------------h--
Confidence 11 110 1235688999999984 23447999998654 44333210 0
Q ss_pred CCCCcHHHHHHHHHHHHHH--HHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC------H
Q 017726 248 PYTPSIQLLYGLRAALDLI--FEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN------S 319 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~ 319 (367)
.+..+.....++..++..- .+.-+++.++++.+.++.+.+.|++.|+.+..+ .++.++|+++++..+ .
T Consensus 301 ~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~----~~g~flwi~l~~~~~~~~~~~~ 376 (468)
T PLN02450 301 FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKS----NAGLFCWVDMRHLLKSNTFEAE 376 (468)
T ss_pred cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CceEEEEEEchHhcCcCCchHH
Confidence 0113333223333333221 011156678888999999999999998877665 567788888853322 2
Q ss_pred HHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecC
Q 017726 320 SEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLG 352 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~ 352 (367)
.++.+.|.+++||.+.||..+. .+++|||++..
T Consensus 377 ~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~ 411 (468)
T PLN02450 377 MELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN 411 (468)
T ss_pred HHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC
Confidence 4577888777899999985432 35689999765
No 129
>PLN02231 alanine transaminase
Probab=99.97 E-value=1.7e-27 Score=224.32 Aligned_cols=320 Identities=13% Similarity=0.029 Sum_probs=219.8
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALT 78 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~ 78 (367)
..+.+.+++...|..+++.+.+.... ...|....+..++|+.+++++ |.+ .+++|++|+|+++++..++.
T Consensus 130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~ 209 (534)
T PLN02231 130 SLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQ 209 (534)
T ss_pred ccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHH
Confidence 45667778888888888887764321 223555677788999999887 332 34569999999999999999
Q ss_pred ccC-CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCC--CCccEEEEEecCCCcccc
Q 017726 79 NTL-SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVT 153 (367)
Q Consensus 79 ~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~ 153 (367)
+++ .+||.|+++.|.|+.+. ..++..|.+++.+++++ +|.+|++++++++++... .++|++++++|+||||.+
T Consensus 210 ~l~~~~gd~Vli~~P~Y~~y~--~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~v 287 (534)
T PLN02231 210 LLIRSEKDGILCPIPQYPLYS--ASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQV 287 (534)
T ss_pred HhccCCCCEEEEeCCCChhHH--HHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcC
Confidence 887 47999999999877653 45677899999999875 368999999999875210 267999999999999999
Q ss_pred cc---HHHHHHHHHhcCCCcEEEEeeeeccCcee----e-cccc---------cc-ceEEEecCCCcccCCCc--ceeee
Q 017726 154 NN---LSKVRKLLDEYRHPALFLVDGVSSICAID----F-RMDE---------WG-IDVALTGSQKALSLPTG--MGIVC 213 (367)
Q Consensus 154 ~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~-~~~~---------~~-~d~~~~s~~K~~~g~~g--~g~~~ 213 (367)
++ +++|.++|++ +|++||+|++|...... + ++.. .. .-+++.|.||.+.|.+| +||++
T Consensus 288 ls~e~l~~Iv~~a~~--~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 288 LAEENQRDIVEFCKQ--EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence 96 5678888888 99999999998753321 1 1100 01 24677799998754444 69987
Q ss_pred e---CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHH-------HHHHh--ChHHHHHHHHHH
Q 017726 214 A---SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD-------LIFEE--GLENVIERHRRL 281 (367)
Q Consensus 214 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~-------~~~~~--g~~~~~~~~~~~ 281 (367)
+ ++++++++..... . . ..++..+..+...++. .+.+. ..+++++.++++
T Consensus 366 ~~~~~~~l~~~l~k~~~-------------~--~----~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r 426 (534)
T PLN02231 366 VTGFTSDVREQIYKVAS-------------V--N----LCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARR 426 (534)
T ss_pred EecCCHHHHHHHHHHHh-------------h--h----cCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 6 6788777754211 0 0 0133333333333331 11110 134567789999
Q ss_pred HHHHHHHHHHc-CCccccCCCccCCCceEEEEc--CCC-C---------CHHHHHHHHHhhCCeEEccCCCCC--CC-cE
Q 017726 282 GKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV--PSH-I---------NSSEIVRRAWQRYNLSLGLGLNKV--AG-KV 345 (367)
Q Consensus 282 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~--~~~-~---------~~~~l~~~L~~~~gv~v~~g~~~~--~~-~~ 345 (367)
++.+.+.|+++ |+.+..+ .+++++|.++ |.. . +...++++|.++.||.+.||..+. .+ .+
T Consensus 427 ~~~l~~~L~~~~gi~~~~p----~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~ 502 (534)
T PLN02231 427 AKTLEDALNSLEGVTCNKA----EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWH 502 (534)
T ss_pred HHHHHHHHhcCCCceecCC----CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCe
Confidence 99999999998 8888777 4666666444 221 1 133467778888899999986543 23 45
Q ss_pred EEEeecCCCC
Q 017726 346 FRIGHLGHLN 355 (367)
Q Consensus 346 iRi~~~~~~~ 355 (367)
||+++....+
T Consensus 503 ~Rit~~~~~e 512 (534)
T PLN02231 503 FRCTILPQED 512 (534)
T ss_pred EEEEeCCCHH
Confidence 9999754333
No 130
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.97 E-value=1.3e-27 Score=217.18 Aligned_cols=317 Identities=18% Similarity=0.111 Sum_probs=222.1
Q ss_pred CCCChHHHHHHHcc--CCCCCCCCcHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 17 PVHIPDQVIRAMNR--NNEDYRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 17 p~~~~~~v~~a~~~--~~~~~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
|...++..++++.+ .......+.......++++.++++++.. ....+++++|+++++..++.++..+|++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~ 88 (350)
T cd00609 9 DFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLV 88 (350)
T ss_pred CCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEE
Confidence 33444444444443 2222233333455667777777777654 2345899999999999999999899999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCH--HHHHHHHhccCCCCccEEEEEecCCCccccccHHHH---HHHHH
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL--DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV---RKLLD 164 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~--e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i---~~~~~ 164 (367)
+.+.|++.. ..++..|.+++.++.+.++..+. +.++..+. +++++|++++++||+|.+.|.+++ .++|+
T Consensus 89 ~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~ 162 (350)
T cd00609 89 PDPTYPGYE--AAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT----PKTKLLYLNNPNNPTGAVLSEEELEELAELAK 162 (350)
T ss_pred cCCCchhHH--HHHHHCCCEEEEEecccccCCccCHHHHHhhcC----ccceEEEEECCCCCCCcccCHHHHHHHHHHHH
Confidence 999888753 56788899999999987766654 56655544 578999999999999999986655 48999
Q ss_pred hcCCCcEEEEeeeeccCcee-------eccccccceEEEecCCCccc-CCCcceeeeeCH-HHHHHhccCCCCceeechH
Q 017726 165 EYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALS-LPTGMGIVCASP-KALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (367)
+ +|+++++|++++.+... ......+.|+++.|++|+++ ++.++|++++++ ++.+.+....
T Consensus 163 ~--~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~--------- 231 (350)
T cd00609 163 K--HGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL--------- 231 (350)
T ss_pred h--CCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH---------
Confidence 9 99999999998764431 12334568999999999996 445579999999 6777665321
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCcc-ccCCCccCCCceEEEEcC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN-CTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~ 314 (367)
.. ..++++.....++..+++... .+++++.+++.++++++.+.|++.+... ..+ ..+.+++++++
T Consensus 232 ----~~-----~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~g~~~~~~~~ 297 (350)
T cd00609 232 ----PY-----TTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKP----SGGFFLWLDLP 297 (350)
T ss_pred ----Hh-----cccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCC----CccEEEEEecC
Confidence 01 123466666666666666554 3478888999999999999999985433 222 35567778875
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecCCCCHHHHHHhhhh
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
...+...+.+.| +++||.+.++..+. .+.++||++....++.+...++|+
T Consensus 298 ~~~~~~~~~~~l-~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 298 EGDDEEFLERLL-LEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred CCChHHHHHHHH-HhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 443444455555 56799998775443 567899998777444455555543
No 131
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.96 E-value=1.9e-27 Score=215.62 Aligned_cols=303 Identities=10% Similarity=0.117 Sum_probs=213.6
Q ss_pred CCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 17 PVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
|.+.|+.+.+++.+.... .+++. ....++|+.++++++++++ +|++|+|+++++..++.++ .+ +.|+++.|.|.
T Consensus 30 ~~~~p~~~~~a~~~~~~~~~~Y~~--~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~ 104 (354)
T PRK06358 30 PLGVPESLKQAITENLDKLVEYPD--PDYLELRKRIASFEQLDLE-NVILGNGATELIFNIVKVT-KP-KKVLILAPTFA 104 (354)
T ss_pred CCCCCHHHHHHHHHHHHhhhcCCC--ccHHHHHHHHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CC-CcEEEecCChH
Confidence 445678888888875332 22233 2367999999999998764 5999999999999988875 44 68999999766
Q ss_pred hHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCc
Q 017726 96 SLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPA 170 (367)
Q Consensus 96 ~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~ 170 (367)
.+ ...++..|.+++.++.+.+ +.+| +++.+.+. .+++++++++|+||||.+++ +++|.++|++ +++
T Consensus 105 ~~--~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~----~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~--~~~ 175 (354)
T PRK06358 105 EY--ERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK----EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEK--RNI 175 (354)
T ss_pred HH--HHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc----cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHh--cCC
Confidence 53 3556788999999998643 4678 66666665 36799999999999999997 5667777888 999
Q ss_pred EEEEeeeeccCceee---c----cccccceEEEecCCCccc-CCCcceeeeeC-HHHHHHhccCCCCceeechHHHHHHh
Q 017726 171 LFLVDGVSSICAIDF---R----MDEWGIDVALTGSQKALS-LPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 171 ~vi~D~~~~~~~~~~---~----~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
++|+|++|......- + .......+++.|++|.++ ...++|+++++ +.+++.+.....
T Consensus 176 ~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~-------------- 241 (354)
T PRK06358 176 YLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE-------------- 241 (354)
T ss_pred EEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--------------
Confidence 999999986433210 1 111234588999999985 23446999885 677676654311
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCH
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINS 319 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (367)
.++.+.....+...++. +.. +++.++.+.++++.+.+.|++. |+.+..+ .+ .+++++++ +.
T Consensus 242 ------~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~----~g-~f~~~~~~---~~ 304 (354)
T PRK06358 242 ------PWSINTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP----SV-NFIFFKLE---KP 304 (354)
T ss_pred ------CCcchHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC----cc-eEEEEEcC---ch
Confidence 22344433334444442 211 5677788899999999999887 7666665 34 36778875 34
Q ss_pred HHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 320 SEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
.++++.|.+ +||.+++|... ..+.++||+ .+..++.+.+..+|.+
T Consensus 305 ~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRls-~~~~~~~~~l~~~l~~ 351 (354)
T PRK06358 305 IDLRKELLK-KGILIRSCSNYRGLDENYYRVA-VKSREDNKKLLKALEV 351 (354)
T ss_pred HHHHHHHHH-CCeEEEECCCCCCCCCCEEEEE-eCCHHHHHHHHHHHHH
Confidence 789999976 59999998553 234689999 5666666666666654
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.96 E-value=4.1e-27 Score=217.72 Aligned_cols=313 Identities=14% Similarity=0.133 Sum_probs=220.5
Q ss_pred CCCCCcccccCCCCCChHHHHHHHccCCCC-CCCC---cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 5 YAPGKNHLFVPGPVHIPDQVIRAMNRNNED-YRSP---AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 5 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~-~~~~---~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+.-+|.|+....-+.+-+.+.+++.+.... +.+. .......++++.+++++|.+. +++++||++|+..++.++
T Consensus 58 ~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~---~~~~~sG~~An~~~l~~l 134 (407)
T PRK07179 58 ILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES---CLLCQSGWAANVGLLQTI 134 (407)
T ss_pred EeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHh
Confidence 445677777776555666666666654322 1111 112467789999999999754 577899999999999999
Q ss_pred CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHH
Q 017726 81 LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVR 160 (367)
Q Consensus 81 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~ 160 (367)
..+||.|++...+|.+.. ..++..|+++..++. .|+++++++++++ ++++|++++++||+|.+.|+++|.
T Consensus 135 ~~~g~~v~~~~~~h~s~~--~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~---~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 135 ADPNTPVYIDFFAHMSLW--EGVRAAGAQAHPFRH-----NDVDHLRRQIERH---GPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred CCCCCEEEEECCcCHHHH--HHHHHCCCeEEEecC-----CCHHHHHHHHHhc---CCeEEEECCCCCCCCccccHHHHH
Confidence 999999999888777653 334567777665543 4899999999742 468999999999999999999999
Q ss_pred HHHHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 161 KLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 161 ~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
++|++ +|+++|+|++|+.+... ++.. .++|+++.|++|+++ ++ +|++++++++++.+.....+. .
T Consensus 205 ~l~~~--~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g-~~-~G~l~~~~~~~~~~~~~~~~~-~ 278 (407)
T PRK07179 205 DIAEE--FGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFA-GR-AGIITCPRELAEYVPFVSYPA-I 278 (407)
T ss_pred HHHHH--cCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhh-cc-CeEEEeCHHHHHHHHHhCcCe-e
Confidence 99999 99999999999865431 1111 246999999999996 44 699999998877664321110 0
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 311 (367)
+..+.+...++++.++++.+.+. ++.+++++++++++.+.|+++|+++.+. + .++.+
T Consensus 279 ---------------~~~t~~~~~~aa~~aal~~~~~~--~~~~~~l~~~~~~l~~~L~~~g~~v~~~-----~-~i~~l 335 (407)
T PRK07179 279 ---------------FSSTLLPHEIAGLEATLEVIESA--DDRRARLHANARFLREGLSELGYNIRSE-----S-QIIAL 335 (407)
T ss_pred ---------------eCCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC-----C-CEEEE
Confidence 12234555556677777776443 5677899999999999999988876642 3 46667
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHHHHH
Q 017726 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~~~~ 360 (367)
.++...+...+.+.|.+ +||.+.....+ ....++||++....+++|+.
T Consensus 336 ~~~~~~~~~~~~~~L~~-~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~ 386 (407)
T PRK07179 336 ETGSERNTEVLRDALEE-RNVFGAVFCAPATPKNRNLIRLSLNADLTASDLD 386 (407)
T ss_pred EeCCHHHHHHHHHHHHH-CCceEeeecCCCCCCCCceEEEEECCCCCHHHHH
Confidence 66432345667778865 49974422111 22467999998877665544
No 133
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=1.1e-27 Score=224.45 Aligned_cols=282 Identities=13% Similarity=0.070 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHhc------CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHH-HhCCceEEE
Q 017726 42 ALTKTLLEDIKKIFK------TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQ-RLNFNVDVV 113 (367)
Q Consensus 42 ~~~~~~~~~la~~~~------~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-~~g~~~~~v 113 (367)
.+..++|+.++++++ .+ ++++|++|+|+++++..++.++++|||.|+++.|.|..+. ..++ ..|++++.+
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~--~~~~~~~G~~vv~v 171 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFD--RDLRWRTGVEIIPV 171 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchH--HHHHhhCCCEEEEE
Confidence 445678888888876 21 3356999999999999999999999999999999777653 2234 579999999
Q ss_pred eCC--CCCCCCHHHHHHHHhc---cCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCcee-
Q 017726 114 ESD--WGEGAKLDVLASKLAA---DTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID- 184 (367)
Q Consensus 114 ~~~--~~~~~d~e~l~~~i~~---~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~- 184 (367)
+++ .++.+|++.++++++. .. .++|+|++++|+||||.+++ +++|.++|++ ++++||+|++|+.....
T Consensus 172 ~~~~~~~~~~~~~~le~a~~~a~~~~-~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~--~~i~lI~DEiY~~~~f~~ 248 (496)
T PLN02376 172 PCSSSDNFKLTVDAADWAYKKAQESN-KKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTR--KNIHLVVDEIYAATVFAG 248 (496)
T ss_pred eCCCCccCcCCHHHHHHHHHHHHhcC-CCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHH--cCCEEEEEcCccccccCC
Confidence 985 3467899999876532 11 47899999999999999998 4557778888 99999999999753211
Q ss_pred ---ec---cc-c-----c--cceEEEecCCCccc-CCCcceeeeeCHH-HHHHhccCCCCceeechHHHHHHhhcCCccC
Q 017726 185 ---FR---MD-E-----W--GIDVALTGSQKALS-LPTGMGIVCASPK-ALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (367)
Q Consensus 185 ---~~---~~-~-----~--~~d~~~~s~~K~~~-g~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (367)
.+ .. . . ..-+++.|+||.++ ...++|+++..++ +.+.+.... . .
T Consensus 249 ~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~------------------~--~ 308 (496)
T PLN02376 249 GDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS------------------S--F 308 (496)
T ss_pred CCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh------------------h--c
Confidence 11 10 0 0 12245789999984 2234699998544 443332110 0 1
Q ss_pred CCCcHHHHHHHHHHHHHHH--HhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC-------H
Q 017726 249 YTPSIQLLYGLRAALDLIF--EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN-------S 319 (367)
Q Consensus 249 ~~~~~~~~~al~~al~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 319 (367)
+..+.....++...+..-. +.-+++.++++.+..+.+.+.|++.|+++..+ .++.++|++++...+ .
T Consensus 309 ~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~----~aG~flwi~l~~~~~~~~~~~~e 384 (496)
T PLN02376 309 GLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTS----NAGLFAWMDLRHLLRDRNSFESE 384 (496)
T ss_pred CCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC----CceEEEEEEchhhhccCCchhHH
Confidence 1233333233333332111 11145567788888999999999888887666 567788999854322 2
Q ss_pred HHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 320 SEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
.++.+.|.++.||.+.||..+ ..+++|||++..
T Consensus 385 ~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~ 419 (496)
T PLN02376 385 IELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN 419 (496)
T ss_pred HHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC
Confidence 578888887789999998554 235689999754
No 134
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=2.5e-27 Score=220.20 Aligned_cols=290 Identities=20% Similarity=0.143 Sum_probs=214.8
Q ss_pred CCcHHHHHHHHHHHHHHHhc----CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 37 SPAVPALTKTLLEDIKKIFK----TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 37 ~~~~~~~~~~~~~~la~~~~----~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
.+....+..++|+.+++++. .. .+++|++|+|+++|+.+++..+++|||.|++.+|+|++.. .+.+..|+++.
T Consensus 127 ~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~--~~~~~~g~~~~ 204 (459)
T COG1167 127 QYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL--QALEALGARVI 204 (459)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH--HHHHHcCCcEE
Confidence 33444556677777777764 33 3346999999999999999999999999999999988754 66788999999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEE-EecCCCccccccH---HHHHHHHHhcCCCcEEEEeeeeccCcee---
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICI-VHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAID--- 184 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~-~~~~n~tG~~~~~---~~i~~~~~~~~~~~~vi~D~~~~~~~~~--- 184 (367)
.||+++ ..+|+|++++.+.. .++|++++ .+.+||||.+++. ++|.++|++ +|++||+|+.++.....
T Consensus 205 ~vp~d~-~G~~~e~le~~~~~---~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~--~~~~IIEDD~y~el~~~~~p 278 (459)
T COG1167 205 PVPVDE-DGIDPEALEEALAQ---WKPKAVYVTPTFQNPTGVTMSLERRKALLALAEK--YDVLIIEDDYYGELRYDGPP 278 (459)
T ss_pred ecCCCC-CCCCHHHHHHHHhh---cCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHH--cCCeEEeeCcchhhhcCCCC
Confidence 999984 45899999999986 36788855 4677999999985 469999999 99999999998754332
Q ss_pred ----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHH
Q 017726 185 ----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLR 260 (367)
Q Consensus 185 ----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 260 (367)
...+..+..++++|+||+++...++||+++++++++++..... .. ...++.....++.
T Consensus 279 ~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~-------------~~-----~~~~s~~~Q~~la 340 (459)
T COG1167 279 PPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQ-------------AA-----DLGPSSLSQAALA 340 (459)
T ss_pred CCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHH-------------Hh-----cCCCChHHHHHHH
Confidence 1122336789999999999766778999999999888874321 11 1123333222222
Q ss_pred HHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHc-C--CccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 017726 261 AALDL--IFEEGLENVIERHRRLGKATRLAVEAW-G--LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 261 ~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~-g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~ 335 (367)
.-+.. +.+ -++++++.+.+.++.+.+.|++. + ..+..+ .++.++|++++++.+..++.+.+.++ ||.+.
T Consensus 341 ~~l~~G~~~~-hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p----~gG~flwl~l~~~~~~~~l~~~a~~~-gv~i~ 414 (459)
T COG1167 341 AFLLSGHYDR-HLRRLRREYARRRDALLEALAEYLPELATWTRP----EGGLFLWLELPEGIDARELLAAALEK-GVVVT 414 (459)
T ss_pred HHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC----CceEEEEEEcCCCCCHHHHHHHHHHC-CCEEE
Confidence 22221 111 17788999999999999999996 2 455555 57789999999888999999999765 99888
Q ss_pred c-CCCCCC----CcEEEEeecCCCCHHHH
Q 017726 336 L-GLNKVA----GKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 336 ~-g~~~~~----~~~iRi~~~~~~~~~~~ 359 (367)
+ |..+.. .+.||+|+.. .+++++
T Consensus 415 ~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i 442 (459)
T COG1167 415 PLGSAFSADGDPRNGLRLSFSS-PSEEEI 442 (459)
T ss_pred cCCccccCCCCCCCeEEEEcCC-CCHHHH
Confidence 8 744332 3479999644 434333
No 135
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=8.1e-27 Score=212.97 Aligned_cols=303 Identities=18% Similarity=0.157 Sum_probs=213.2
Q ss_pred ChHHHHHHHccCCCC----CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 20 IPDQVIRAMNRNNED----YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.++++.+++.+.... ..+ ++......++++.++++++.+ +.++++ +|++++..++.+++.+||.|++.+
T Consensus 31 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~-~G~~~~~~~l~~~~~~gd~v~~~~ 107 (360)
T TIGR00858 31 SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTE--AALLFS-SGYLANVGVISALVGKGDLILSDA 107 (360)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--CEEEEC-chHHHHHHHHHHhCCCCCEEEEEc
Confidence 345666666654321 111 223456788999999999854 345554 557777667777889999999998
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcE
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPAL 171 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~ 171 (367)
+.|++.. ..++..|.+++.++. +|++++++.+++++.+++++|++++++|++|...|+++|.++|++ +|++
T Consensus 108 ~~~~~~~--~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~--~~~~ 178 (360)
T TIGR00858 108 LNHASLI--DGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAER--YGAW 178 (360)
T ss_pred cccHHHH--HHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHH--cCcE
Confidence 8776643 445677888887764 488999999875321357899999999999999999999999999 9999
Q ss_pred EEEeeeeccCceeec---------cccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 172 FLVDGVSSICAIDFR---------MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 172 vi~D~~~~~~~~~~~---------~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+|+|++|+.+....+ ....+.++++.|++|+++ +.| |++++++++++++...... ...
T Consensus 179 li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~-~~~---------- 245 (360)
T TIGR00858 179 LMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYG-AYVAGSQALIDYLINRART-LIF---------- 245 (360)
T ss_pred EEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccC-cEEEcCHHHHHHHHHhCcc-cee----------
Confidence 999999986543211 112357899999999995 666 8999999888776432110 000
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHH
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (367)
..+.+...++++.++++.+.. .++.++++.++++++.+.|+++++++..+ .+.++++.++...+..++
T Consensus 246 -----~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 313 (360)
T TIGR00858 246 -----STALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEALGFTLMPS-----CTPIVPVIIGDNASALAL 313 (360)
T ss_pred -----cCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccCCC-----CCCEEEEEeCCHHHHHHH
Confidence 112344455666677766543 35678899999999999999988776543 344677877544456789
Q ss_pred HHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHHHHH
Q 017726 323 VRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~~~~ 360 (367)
.++|.+ +||.+.++..+ ..+.++||++...++.+++.
T Consensus 314 ~~~l~~-~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~ 353 (360)
T TIGR00858 314 AEELQQ-QGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDID 353 (360)
T ss_pred HHHHHH-CCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHH
Confidence 999965 59999864322 22357999988766655443
No 136
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.96 E-value=1e-27 Score=221.20 Aligned_cols=307 Identities=16% Similarity=0.110 Sum_probs=201.3
Q ss_pred CChHHHHHHHccCCCC------CCCCcHHHHHHHHHHHHHHHh---cCCCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 19 HIPDQVIRAMNRNNED------YRSPAVPALTKTLLEDIKKIF---KTTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~------~~~~~~~~~~~~~~~~la~~~---~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
++++.+.+++.+.... ..+|.......++|+.+++++ ++++ ++|++|+|+++++..+. .++.+||.|++
T Consensus 46 ~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~-d~I~it~Ga~~al~~l~-~l~~~gd~Vlv 123 (402)
T TIGR03542 46 PLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDP-EEIFISDGAKCDVFRLQ-SLFGSDNTVAV 123 (402)
T ss_pred CCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCH-HHEEECCCcHHHHHHHH-HhcCCCCEEEE
Confidence 4566667766653221 233444466778999999976 5545 46999999999998764 55689999999
Q ss_pred EeCCcchHHHHHHHHHhCC-----------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---
Q 017726 90 FLIGQFSLLWIDQQQRLNF-----------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~-----------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~--- 155 (367)
++|+|..+ ...++..|+ +++.++.+.+..++++ +++ . +++++|++++||||||.+++
T Consensus 124 ~~P~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~--~----~~~~~i~l~nP~NPTG~~~s~~~ 194 (402)
T TIGR03542 124 QDPVYPAY--VDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD-LPE--E----PKIDIIYLCSPNNPTGTVLTKEQ 194 (402)
T ss_pred eCCCCcch--HHHHHHcCCccccccccccceEEEeecchhhCCCCC-ccc--c----CCceEEEEeCCCCCCCccCCHHH
Confidence 99987764 356777888 8888887643223222 111 1 36799999999999999998
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCce----eecc---cc-ccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccC
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAI----DFRM---DE-WGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~----~~~~---~~-~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~ 225 (367)
+++|.++|++ ++++||+|++|..... +.+. .. ....+++.|+||.++ .+| +|+++++++++......
T Consensus 195 ~~~l~~~a~~--~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g-~pGlRiG~~i~~~~l~~~~~~~ 271 (402)
T TIGR03542 195 LKELVDYANE--HGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAG-FTGVRLGWTVVPKELTYADGHS 271 (402)
T ss_pred HHHHHHHHHH--cCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccC-CCCcceEEEEecHHHhhcchhh
Confidence 6678888888 9999999999875321 1111 11 124577899999984 444 69999998876211000
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHcCCccccCCCc
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LENVIERHRRLGKATRLAVEAWGLKNCTQKEE 302 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 302 (367)
.. ..+..... .. .++++.. +..++...+.+.+ +.+.++.++++++.+.+.|++.|+.+..+
T Consensus 272 ~~-------~~~~~~~~-~~--~~~~s~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~--- 335 (402)
T TIGR03542 272 VI-------QDWERRQC-TK--FNGASYP---VQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGG--- 335 (402)
T ss_pred HH-------HHHHHHhh-hc--ccCCCHH---HHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCC---
Confidence 00 00000000 10 1123332 2222333333221 44556778888999999999888766554
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCCCCH
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGHLNE 356 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~~~~ 356 (367)
.++.++|++++...+..++.+.|.+++||.+.+|..+ ...+++||++....+.
T Consensus 336 -~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~ 390 (402)
T TIGR03542 336 -EHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKREN 390 (402)
T ss_pred -CceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHH
Confidence 3566889999766778899999987779999998543 2347899996554333
No 137
>PLN02672 methionine S-methyltransferase
Probab=99.96 E-value=4.3e-27 Score=231.43 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=221.4
Q ss_pred CCCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCC--ceEEecCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 16 GPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSG--TPFLIPTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~--~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
.+.++|+.+.+++.+.... ...+...+....+++++++.+|.+.. ++|++++|+++++..++.++++|||.|+++.|
T Consensus 707 ~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~P 786 (1082)
T PLN02672 707 SFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAG 786 (1082)
T ss_pred CCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 3456788888888764322 22222345578899999999898643 46999999889999999999999999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecC-CCcccccc---HHHHHHHHHhc
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~-n~tG~~~~---~~~i~~~~~~~ 166 (367)
.|+.+. ..++..|++++.++++. ++.+|++++++++++. +.++|++++|+ ||||.+++ +++|.++|++
T Consensus 787 tY~~Y~--~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~---~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k- 860 (1082)
T PLN02672 787 SNGTYV--SAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV---KKPWVYISGPTINPTGLLYSNSEIEEILSVCAK- 860 (1082)
T ss_pred ChHHHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC---CCCEEEEECcCCCCcCccCCHHHHHHHHHHHHH-
Confidence 776643 55788999999999864 4678899999998641 34689999997 99999997 5567777888
Q ss_pred CCCcEEEEeeeeccCceee------ccc----c------ccceEEEecCCCcccCCCc--ceeeeeCHH-HHHHhccCCC
Q 017726 167 RHPALFLVDGVSSICAIDF------RMD----E------WGIDVALTGSQKALSLPTG--MGIVCASPK-ALEASKTAKS 227 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~~------~~~----~------~~~d~~~~s~~K~~~g~~g--~g~~~~~~~-~~~~~~~~~~ 227 (367)
+|++||+|++|+...... +.. . ....+++.|+||.++ .+| +|+++++++ +++.+.....
T Consensus 861 -~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~-lpGLRIGylIap~~eLi~~l~~~~~ 938 (1082)
T PLN02672 861 -YGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL-SGGHEFGFLALNDSVLIDAFHSAPG 938 (1082)
T ss_pred -cCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc-cHHHHheeEEeCCHHHHHHHHHhhh
Confidence 999999999996322210 000 0 013578889998874 555 699998654 7777754210
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH------hChHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE------EGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~------~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (367)
... +......++.+++..+.. ..+++.++.++++++++.+.|++.|+.+..+
T Consensus 939 ---------------~s~-----~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~v~~P-- 996 (1082)
T PLN02672 939 ---------------LSR-----PHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWDVLEP-- 996 (1082)
T ss_pred ---------------hcC-----CCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCeEecC--
Confidence 010 111122344444443321 1256677789999999999999998887776
Q ss_pred ccCCCceEEEEcCC-----------------CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 302 EWFSDTVTAVIVPS-----------------HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 302 ~~~~~~~~~~~~~~-----------------~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
.+++++|++++. +.+..+++++|.++.||.+.+|.....++++||++....+..+...+.|
T Consensus 997 --eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL 1074 (1082)
T PLN02672 997 --QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAI 1074 (1082)
T ss_pred --CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHH
Confidence 567777776421 2467889999998889999999654446789999765333333333333
No 138
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=3.1e-27 Score=212.51 Aligned_cols=275 Identities=12% Similarity=0.079 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCC
Q 017726 43 LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAK 122 (367)
Q Consensus 43 ~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 122 (367)
...++|+.+++++|.++.+ |++|+|+++++..++. ++.+| .|++++|.|+.+ ...++..|++++.+|++. ...|
T Consensus 41 ~~~~lr~~ia~~~~~~~~~-I~it~Gs~~~l~~~~~-~~~~~-~vv~~~P~y~~y--~~~~~~~G~~v~~vp~~~-~~~~ 114 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIK-VLIGPGLTHFIYRLLS-YINVG-NIIIVEPNFNEY--KGYAFTHGIRISALPFNL-INNN 114 (332)
T ss_pred CHHHHHHHHHHHhCCCcce-EEECCCHHHHHHHHHH-HhCCC-cEEEeCCChHHH--HHHHHHcCCeEEEEeCCc-ccCc
Confidence 4679999999999998654 9999999999999886 46776 577778866553 466888999999999864 3345
Q ss_pred HHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhcCCCcEEEEeeeeccCceee-----cc-ccccce
Q 017726 123 LDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICAIDF-----RM-DEWGID 193 (367)
Q Consensus 123 ~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-----~~-~~~~~d 193 (367)
.+.++ + .++|+|++|+||||||.+++. ++|.++|++ ++++||+|+++....... .. ...+..
T Consensus 115 ~~~l~----~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~--~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~v 185 (332)
T PRK06425 115 PEILN----N---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRK--KGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV 185 (332)
T ss_pred HHHHh----h---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHH--cCCEEEEecchhccccccchhHHHHhccCCCE
Confidence 44443 1 367999999999999999985 456666777 999999999987543211 11 112356
Q ss_pred EEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-
Q 017726 194 VALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG- 270 (367)
Q Consensus 194 ~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g- 270 (367)
+++.|+||.++ .+| +|++++++++++++..... +++.+... + .++.......
T Consensus 186 i~~~SfSK~~~-l~GlRiGy~v~~~~li~~l~~~~~--------------------~~~~~~~~---~-~~l~~~~~~~~ 240 (332)
T PRK06425 186 IIGRSLTKILG-IPSLRIGYIATDDYNMKISRKITE--------------------PWSVCDPA---I-DFIRSIDLDYV 240 (332)
T ss_pred EEEeecHHhcC-CchhhheeeecCHHHHHHHHHcCC--------------------CCccCHHH---H-HHHHHhhhHHH
Confidence 88899999985 444 6999999999888764311 22233221 1 1222111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEE
Q 017726 271 LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRI 348 (367)
Q Consensus 271 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi 348 (367)
+++.++.++++++.+.+.|+++|+.+..+ ..+.+++++++ +..++.+.|.+ +||.++++..+ ..++++||
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~~g~f~~~~~~---~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRi 312 (332)
T PRK06425 241 AKHSLDIMENERSYLINNLEAMGFRAAGD----PSANFITFMIP---DAHDFYSYLLK-NGILVRLLDDYECLGEQYIRI 312 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEECCC----CCceEEEEEcC---CHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEE
Confidence 45678888999999999999988776543 23446778875 67899999976 49999988543 22468999
Q ss_pred eecCCCCHHHHHHhhhhc
Q 017726 349 GHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 349 ~~~~~~~~~~~~~~~l~~ 366 (367)
++ +..++.+.+.++|++
T Consensus 313 s~-~~~~~~~~l~~al~~ 329 (332)
T PRK06425 313 AI-RRRSFNIKLVNALRN 329 (332)
T ss_pred Ee-CCHHHHHHHHHHHHH
Confidence 95 566677777777764
No 139
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=3.7e-27 Score=213.26 Aligned_cols=308 Identities=13% Similarity=0.060 Sum_probs=206.8
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
.|.++++.+++++.+.......+.......++++.+++++| + +++++++||++++..++.+++.+||.|+++++.|.
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g-~--~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~ 82 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG-K--EAALFVPSGTAANQLALAAHTQPGGSVICHETAHI 82 (338)
T ss_pred cCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC-C--CeEEEecCchHHHHHHHHHhcCCCCeEEEecCcce
Confidence 45667888999998754332233334678899999999999 3 24788899999999999999999999999999877
Q ss_pred hHHH-HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC---CCCccEEEEEecCCCccccc---cHHHHHHHHHhcCC
Q 017726 96 SLLW-IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHTIKAICIVHNETATGVTN---NLSKVRKLLDEYRH 168 (367)
Q Consensus 96 ~~~~-~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~---~~~~~lv~~~~~~n~tG~~~---~~~~i~~~~~~~~~ 168 (367)
+... ...+...|++++.++.+. +.+|++++++++++.. .+++++|++++|+|| |.++ ++++|.++|++ +
T Consensus 83 ~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~--~ 158 (338)
T cd06502 83 YTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKE--N 158 (338)
T ss_pred eeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHH--c
Confidence 6431 123455799999999764 6789999999997421 036799999999998 5443 56778999998 9
Q ss_pred CcEEEEeeeeccCc-----eeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 169 PALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 169 ~~~vi~D~~~~~~~-----~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
|+++++|++|..+. ..+.....++|+++.|+||+++++ |.++++.++++++++..... ..
T Consensus 159 ~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~-~g~~~~~~~~~~~~~~~~~~--------------~~ 223 (338)
T cd06502 159 GLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAP-VGAVVVGNRDFIARARRRRK--------------QA 223 (338)
T ss_pred CCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCc-cceEEECCHHHHHHHHHHHH--------------Hh
Confidence 99999999874321 111111236789999999999644 43566788888887764210 00
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC-CHHHH
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI-NSSEI 322 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 322 (367)
+. .++.+. ....+++..+...+..+..++..++++++.+.|+++|+.+..+ ..+ ++.++.+.+. ...++
T Consensus 224 ~~--~~~~~~---~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~-~~~v~~~~~~~~~~~l 293 (338)
T cd06502 224 GG--GMRQSG---FLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESEV----QTN-IVLLDPVEANAVFVEL 293 (338)
T ss_pred CC--ChhhHH---HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCcccc----cCC-eEEEecCCccHHHHHH
Confidence 11 111222 1223344444443455667888899999999999987755443 333 5566653221 12233
Q ss_pred HHHHHh--hCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 323 VRRAWQ--RYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 323 ~~~L~~--~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
.+.+.+ ++|+.+.+.. ..++|+++...++.+|+
T Consensus 294 ~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i 328 (338)
T cd06502 294 SKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDV 328 (338)
T ss_pred HHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHH
Confidence 333321 4588887642 26899998766555443
No 140
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=9.4e-27 Score=215.53 Aligned_cols=321 Identities=17% Similarity=0.138 Sum_probs=210.7
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCC----CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-- 81 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-- 81 (367)
+|.|+-.+.++.+-+++.+++.+..... ..++..+...++++.+++++|.+ +.+++ ++|++++..++..+.
T Consensus 53 sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~--~~i~~-~sG~~a~~~~i~~l~~~ 129 (410)
T PRK13392 53 SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKE--SALLF-TSGYVSNDAALSTLGKL 129 (410)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCC--CEEEE-CcHHHHHHHHHHHHhcC
Confidence 3555544434334444444444433211 11223345779999999999964 33444 667888887776553
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHH
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~ 161 (367)
.+|+.|++....|++.. ..++..|.++..++.+ |.+++++.++....+++++|++++|+||+|.+.|+++|.+
T Consensus 130 ~~g~~vi~~~~~h~s~~--~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~ 202 (410)
T PRK13392 130 LPGCVILSDALNHASMI--EGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICD 202 (410)
T ss_pred CCCCEEEEehhhhHHHH--HHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHH
Confidence 47887777655555542 3466778887776532 5666777665432247899999999999999999999999
Q ss_pred HHHhcCCCcEEEEeeeeccCceeec------c--ccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 162 LLDEYRHPALFLVDGVSSICAIDFR------M--DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 162 ~~~~~~~~~~vi~D~~~~~~~~~~~------~--~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+|++ +|+++++|++|+.+..... . .....|+++.|++|+++ ..| |++++++++++.+.....+ +.+
T Consensus 203 l~~~--~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g-~~G-G~~~~~~~~~~~l~~~~~~-~~~- 276 (410)
T PRK13392 203 LADR--YNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFG-CLG-GYIAASADLIDFVRSFAPG-FIF- 276 (410)
T ss_pred HHHH--cCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhh-ccc-chhhcCHHHHHHHHHhCcc-hhc-
Confidence 9999 9999999999985543110 0 01146899999999995 555 8888999988866543211 000
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
....+...++++.++++.+... ...++++.++++++.+.|+++|+++..+ .++ ++.+.+
T Consensus 277 --------------s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-~~~i~~ 335 (410)
T PRK13392 277 --------------TTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANGIPVMPS----PSH-IVPVMV 335 (410)
T ss_pred --------------cCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC----CCC-EEEEEe
Confidence 1123444556777788776554 3456778899999999999999877654 333 444555
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHHH--HHHhhhh
Q 017726 314 PSHINSSEIVRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEVM--FNFQLLF 365 (367)
Q Consensus 314 ~~~~~~~~l~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~~--~~~~~l~ 365 (367)
++..+..+++++|.+++||.+.++..+ ....++||+++...+.+| ...++|+
T Consensus 336 ~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 336 GDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred CCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 433345689999976679999875432 223579999876666554 3444443
No 141
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.3e-26 Score=216.97 Aligned_cols=319 Identities=14% Similarity=0.162 Sum_probs=222.6
Q ss_pred CCCcccccCCC-CCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 7 PGKNHLFVPGP-VHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 7 ~~~~~~~~~~p-~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
-+++|+-...+ ..+++.+.+++.++..... .++......++++.+++++|.++ .+++ ++|+.++..++.+++
T Consensus 106 ~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~-~~G~~an~~~i~al~ 182 (489)
T PLN02483 106 GSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPA--AIVF-GMGYATNSTIIPALI 182 (489)
T ss_pred ecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCc--EEEE-CCHHHHHHHHHHHhC
Confidence 35677777765 4567889999999764311 24456788999999999999644 4666 556777777788889
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC---CCC-----ccEE-EEEecCCCccc
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHT-----IKAI-CIVHNETATGV 152 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~---~~~-----~~lv-~~~~~~n~tG~ 152 (367)
++||.|++.++.|.+.. ..++..|++++.++.+ |.+++++.+++.. .++ .+++ ++....|++|.
T Consensus 183 ~~Gd~Vi~d~~~h~s~~--~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~ 255 (489)
T PLN02483 183 GKGGLIISDSLNHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGE 255 (489)
T ss_pred CCCCEEEEcchhhHHHH--HHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCc
Confidence 99999999999888754 4577889999999865 5677776665310 022 2545 44455699999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhc
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~ 223 (367)
+.++++|.++|++ +|+++++|++|+.+... .+....++|++++|++|+++ +.| |++++++++++.+.
T Consensus 256 ~~~l~~I~~la~~--~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g-~~G-G~i~~~~~li~~l~ 331 (489)
T PLN02483 256 LCKLPEIVAVCKK--YKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFG-SCG-GYIAGSKELIQYLK 331 (489)
T ss_pred ccCHHHHHHHHHH--cCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcc-cCc-eEEEcCHHHHHHHH
Confidence 9999999999999 99999999999865421 12222357999999999995 666 99999999998886
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-C---hHHHHHHHHHHHHHHHHHHHHcCCccccC
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-G---LENVIERHRRLGKATRLAVEAWGLKNCTQ 299 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 299 (367)
....... +..+++...+.+..++++.+... + ..+.+++++++++++++.|+++|+.+..+
T Consensus 332 ~~~~~~~----------------~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~ 395 (489)
T PLN02483 332 RTCPAHL----------------YATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGD 395 (489)
T ss_pred HhCcccc----------------ccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 4321100 01123444444556677766532 1 34567889999999999999998877654
Q ss_pred CCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccC-CC--CCCCcEEEEeecCCCCHHHHH
Q 017726 300 KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG-LN--KVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g-~~--~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. ...++++.+....+..++++.|.++ ||.+.+. +. +.....+|+++....+.+|+.
T Consensus 396 ~----~sp~~~l~l~~~~~~~~~~~~Ll~~-GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId 454 (489)
T PLN02483 396 N----DSPVMPIMLYNPAKIPAFSRECLKQ-NVAVVVVGFPATPLLLARARICISASHSREDLI 454 (489)
T ss_pred C----CCCEEEEEECCHHHHHHHHHHHHHC-CcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 2 2335555553333556899999765 9999853 21 222357999887766555443
No 142
>PRK05839 hypothetical protein; Provisional
Probab=99.96 E-value=2e-27 Score=217.07 Aligned_cols=291 Identities=14% Similarity=0.030 Sum_probs=189.0
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHH----hcCC-CCceEEecCChhHHHHHHHHccC--CCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKI----FKTT-SGTPFLIPTTGTGAWESALTNTL--SPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~----~~~~-~~~~v~~~~ggt~al~~~~~~~~--~~gd~vl~~~ 91 (367)
+.++.+.+++.+.......|.......++|+.++++ +|.+ .+++|++|+|+++++..++..++ .+||.|+++.
T Consensus 37 ~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~ 116 (374)
T PRK05839 37 ETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPN 116 (374)
T ss_pred CCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECC
Confidence 456778888776433323333333445666666554 4643 34569999999999988877654 4789999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH---HHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDWG--EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL---SKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~---~~i~~~~~~~ 166 (367)
|.|+.+. ..++..|++++.++.+.+ +.+|+++. .+ +++|+|++++||||||.+++. ++|.++|++
T Consensus 117 P~y~~~~--~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~-----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~- 186 (374)
T PRK05839 117 PFYQIYE--GAAIASRAKVLLMPLTKENDFTPSLNEK--EL-----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALK- 186 (374)
T ss_pred CCchhhH--HHHHhcCCEEEEeecccccCCcCCcchh--hh-----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHH-
Confidence 9776643 456788999999998754 34444332 22 257999999999999999974 556677777
Q ss_pred CCCcEEEEeeeeccCce--ee-cc---------ccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 167 RHPALFLVDGVSSICAI--DF-RM---------DEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~--~~-~~---------~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+|++||+|++|..... +. .. ...+.-+++.|+||.++ ...++|+++.++++++++.....
T Consensus 187 -~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~------ 259 (374)
T PRK05839 187 -HDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRT------ 259 (374)
T ss_pred -cCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHh------
Confidence 9999999999875321 11 10 11135688999999863 22336999999998887753211
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
. ..+..+.....++..++. .+.-+++.++++.++++.+.+.| ++. .+ .++.++|+++
T Consensus 260 ----------~--~~~~~~~~~q~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p----~gg~fi~~~~ 316 (374)
T PRK05839 260 ----------Y--LGCASPLPLQKAAAVAWL--DDEHAEFFRNIYAKNLKLAREIL---GIT--IP----PATFYVWLPV 316 (374)
T ss_pred ----------h--cCCCCChHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHhc---CCC--CC----CeeEEEEEeC
Confidence 0 011223222222222221 12225666777777777766544 443 22 4566788887
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC----CCcEEEEeecC
Q 017726 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV----AGKVFRIGHLG 352 (367)
Q Consensus 314 ~~~~~~~~l~~~L~~~~gv~v~~g~~~~----~~~~iRi~~~~ 352 (367)
+ +..+++++|.+++||.+.+|..+. ..+++||++..
T Consensus 317 ~---~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~ 356 (374)
T PRK05839 317 D---NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY 356 (374)
T ss_pred C---ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC
Confidence 5 457899999876799999984322 24789999853
No 143
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-27 Score=217.96 Aligned_cols=304 Identities=17% Similarity=0.141 Sum_probs=204.6
Q ss_pred CChHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcC----C-CCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 19 HIPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKT----T-SGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
+.++.+.+++.+.... ...|.......++|+.++++++. . ++++|++++|+++++..++.+++.+||.|++
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli 125 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIV 125 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Confidence 4567788877653321 12232334566788888888752 1 2345999999999999999998999999999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHH---HHHHHHh
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK---VRKLLDE 165 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~---i~~~~~~ 165 (367)
++|.|... ...++..|++++.++.+++ +.+|+++++++++ ++++++++++|+||||.++|.++ |.++|++
T Consensus 126 ~~p~~~~~--~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~----~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~ 199 (394)
T PRK06836 126 FAPYFVEY--RFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT----PKTKAVIINSPNNPTGVVYSEETLKALAALLEE 199 (394)
T ss_pred cCCCCccH--HHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC----cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 99976653 3557788999999998765 6899999999997 46799999999999999998554 5555665
Q ss_pred c----CCCcEEEEeeeeccCcee---e-c-cccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechH
Q 017726 166 Y----RHPALFLVDGVSSICAID---F-R-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 166 ~----~~~~~vi~D~~~~~~~~~---~-~-~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
. .||+++++|++|...... . . ....+..+++.|++|.++ ...++|+++++++..+......
T Consensus 200 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~--------- 270 (394)
T PRK06836 200 KSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVA--------- 270 (394)
T ss_pred hhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHH---------
Confidence 2 269999999998643221 1 0 112345799999999995 2234799999887633211000
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
.. ....... ..+..+.....++ ..+.+.+ ..++.+.++++.+.+.|++.|+.+..+ .+++++|+++|.
T Consensus 271 ~~-~~~~~~~-~~~~~~~~~q~~~----~~~l~~~--~~~~~~~~~r~~l~~~L~~~g~~~~~~----~gg~~~~~~~~~ 338 (394)
T PRK06836 271 AL-VFANRIL-GFVNAPALMQRVV----AKCLDAT--VDVSIYKRNRDLLYDGLTELGFECVKP----QGAFYLFPKSPE 338 (394)
T ss_pred HH-HHHhhcc-ccccCCHHHHHHH----HHHhCCh--HHHHHHHHHHHHHHHHHHhCCCEeecC----CceEEEEEeCCC
Confidence 00 0000000 0112332222222 2222222 124567778889999998888777665 456677888765
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeec
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHL 351 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~ 351 (367)
.+..++++.|. ++||.+.+|..+..++++||++.
T Consensus 339 -~~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~ 372 (394)
T PRK06836 339 -EDDVAFCEKAK-KHNLLLVPGSGFGCPGYFRLSYC 372 (394)
T ss_pred -CCHHHHHHHHH-hCCEEEECchhcCCCCeEEEEec
Confidence 57788998885 56999999865545678999975
No 144
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.96 E-value=2e-26 Score=206.71 Aligned_cols=306 Identities=13% Similarity=0.105 Sum_probs=213.5
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD 85 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd 85 (367)
+|.+.|+-....+.+.++..+++.++. +......++++.+++++|.+++ ++++++||++|+..++.+++++||
T Consensus 24 ~~~~~ylgl~~~~~~~~~~~~~~~~~~------g~~~~~~~Le~~lA~~~g~~~e-~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 24 DSLYDLTGLAGGFKIDEEDLELLETYV------GPAIFEEKVQELGREHLGGPEE-KILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ccccccccCCCChhHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHcCCCcc-eEEEECCHHHHHHHHHHHhCCCCC
Confidence 466888888888888888888888763 2337888999999999999764 488999999999999999999999
Q ss_pred eEEEEeC---CcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc---ccHHHH
Q 017726 86 RIISFLI---GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT---NNLSKV 159 (367)
Q Consensus 86 ~vl~~~~---~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~---~~~~~i 159 (367)
.|+++.+ .|.+ +...++..|+++... .++++++. . +++++|+++ +.+++|.+ .|+++|
T Consensus 97 ~Vli~~~d~p~~~s--~~~~~~l~ga~~~~~-------~~l~~l~~--~----~~~~lIiit-g~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 97 KVVHYLPEKPAHPS--IPRSCKLAGAEYFES-------DELSELKK--I----DGTSLVVIT-GSTMDLKVVSEEDLKRV 160 (346)
T ss_pred EEEECCCCCCCchh--HHHHHHHcCCEEecc-------CCHHHHhh--C----cCceEEEEE-CCCCCCcccCHHHHHHH
Confidence 9997533 3333 335577778875332 14555322 1 356888775 57899998 468888
Q ss_pred HHHHHhcCCCcEEEEeeeeccCceee----ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechH
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAIDF----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~~----~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
.++|++ +|+++++|++|+.+.... +....+.|+++.|++|+++|.. +|++++++++++.+......
T Consensus 161 ~~la~~--~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~~------- 230 (346)
T TIGR03576 161 IKQAKS--KEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGEQ------- 230 (346)
T ss_pred HHHHHH--cCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhcC-------
Confidence 899998 999999999998754211 1122356899999999887776 49999999999888753211
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
+.++.+...+.+..++|+.. ..+.+++.++++.+.+.+.++++ .+..+ ..+ +++++++
T Consensus 231 -----------~~~s~~~~~~~aa~~aL~~~---~~~~~~~~l~~r~~~~~~~l~~~--~~~~~----~~~-f~~~~~~- 288 (346)
T TIGR03576 231 -----------FGLEAQAPLLAAVVRALEEF---ELSRIRDAFKRKEEVYLRLFDKL--NVERT----PTG-FVIKGVE- 288 (346)
T ss_pred -----------cccCccHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhC--CCCcC----CCe-EEEEeCC-
Confidence 11223444445555566542 23556777788888888888753 34332 233 5777774
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCC-CCCcEEEEeecCCCC---HHHHHHhhhhc
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLGHLN---EVMFNFQLLFQ 366 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~-~~~~~iRi~~~~~~~---~~~~~~~~l~~ 366 (367)
+.+..+++..+.+++||.++++..+ ..++++||++....+ +.+.+..+|++
T Consensus 289 ~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~ 343 (346)
T TIGR03576 289 EEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKD 343 (346)
T ss_pred CCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHh
Confidence 2244566767777889999998654 235689999655443 45666666653
No 145
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=1.9e-26 Score=215.96 Aligned_cols=330 Identities=15% Similarity=0.116 Sum_probs=223.6
Q ss_pred CCCChHHHHHHHccCC--CC--CCC-----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhH-HHHHH--HH-ccCCC
Q 017726 17 PVHIPDQVIRAMNRNN--ED--YRS-----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTG-AWESA--LT-NTLSP 83 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~--~~--~~~-----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~-al~~~--~~-~~~~~ 83 (367)
....++.+.+++.+.. .+ +.. .+..+...++++++++++|.+.. .++.++|+. .+..+ +. ....+
T Consensus 79 ~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~ 156 (481)
T PRK04366 79 TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEAR 156 (481)
T ss_pred CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhcc
Confidence 3466888888888751 22 111 12456678899999999999742 344444543 33322 22 23566
Q ss_pred CC----eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc-ccHHH
Q 017726 84 GD----RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT-NNLSK 158 (367)
Q Consensus 84 gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~-~~~~~ 158 (367)
|| +|+++.+.|+++. ..++..|++++.++.+.++.+|+++++++++ +++++|++++|+ ++|.+ .|+++
T Consensus 157 Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~----~~t~~V~v~~Pn-~tG~~~~dl~e 229 (481)
T PRK04366 157 GDTKRTEVIVPDSAHGTNP--ASAAMAGFKVVEIPSNEDGLVDLEALKAAVG----EDTAALMLTNPN-TLGLFERNILE 229 (481)
T ss_pred CcCCCCEEEEcCCccHhHH--HHHHHcCCEEEEeecCCCCCcCHHHHHhhcc----cCCeEEEEeCCC-CccccchHHHH
Confidence 66 8999999887765 3467789999999998788899999999997 467999999977 99987 58999
Q ss_pred HHHHHHhcCCCcEEEEeeeeccCce-eeccccccceEEEecCCCcccCC-----CcceeeeeCHHHHHHhccCCC----C
Q 017726 159 VRKLLDEYRHPALFLVDGVSSICAI-DFRMDEWGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKS----V 228 (367)
Q Consensus 159 i~~~~~~~~~~~~vi~D~~~~~~~~-~~~~~~~~~d~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~~----~ 228 (367)
|.++|++ +|+++++|+++..+.. ..+...+|+|++++++||||++| +|+|++++++++.+++..... .
T Consensus 230 I~~~a~~--~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~ 307 (481)
T PRK04366 230 IAEIVHE--AGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGD 307 (481)
T ss_pred HHHHHHH--cCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCC
Confidence 9999999 9999999999875422 24566779999999999999755 456799999998888754321 1
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCce
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTV 308 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 308 (367)
.+.+.++ ..+. .+.+-.++.+...+.+....+..+..+|++++.++...++++++++|+++ +.+..+.+ .. ..
T Consensus 308 ~~~l~~~-r~~~--i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~~~--~~-~~ 380 (481)
T PRK04366 308 RYRLDYD-RPKS--IGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-YDLPYDRP--CM-HE 380 (481)
T ss_pred ceeeccc-cccc--CCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCCCC--ee-EE
Confidence 1222221 1110 11112334556555666666667777788888899999999999999997 33332211 11 12
Q ss_pred EEEEcC----CCCCHHHHHHHHHhhCCeEEccCCCCC-CCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 309 TAVIVP----SHINSSEIVRRAWQRYNLSLGLGLNKV-AGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 309 ~~~~~~----~~~~~~~l~~~L~~~~gv~v~~g~~~~-~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
+.|..+ ++.+..++.++|.++ ||.+.....+. ....+|+++.-+++.+ |.+..+|.
T Consensus 381 ~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~ 443 (481)
T PRK04366 381 FVLSGKKLKETGVRTLDIAKRLLDY-GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMK 443 (481)
T ss_pred EEEECccccccCCCHHHHHHHHHHC-CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHH
Confidence 333321 245788999999765 98876333322 2567999986666554 44444443
No 146
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=1.3e-26 Score=214.63 Aligned_cols=315 Identities=12% Similarity=0.018 Sum_probs=216.0
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~ 98 (367)
.+.+++++++.+. ...|.......++|+.++++++.+. +++|+||++|+..++.++++||| |+++++.|.++.
T Consensus 58 a~~~a~~~a~~~g---~~~Y~~~~g~~~Lreaia~~~~~~~---vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~ 130 (460)
T PRK13238 58 AMSDRQWAAMMRG---DEAYAGSRSYYRLEDAVKDIFGYPY---TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR 130 (460)
T ss_pred hhhHHHHHHHHhC---CcccCCCCCHHHHHHHHHHHhCCCc---EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH
Confidence 3455666666431 2234334567799999999998653 89999999999999999999999 888877444332
Q ss_pred HHHHHHHhCCceEEEeCCC--------CC--CCCHHHHHHHHhccCCCCccEEEEEecCCCcc-cccc---HHHHHHHHH
Q 017726 99 WIDQQQRLNFNVDVVESDW--------GE--GAKLDVLASKLAADTAHTIKAICIVHNETATG-VTNN---LSKVRKLLD 164 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~--------~~--~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG-~~~~---~~~i~~~~~ 164 (367)
...+..|.+++.++++. ++ .+|+++|++++++++.+++++|++++|+||+| .+++ +++|.++|+
T Consensus 131 --~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~ 208 (460)
T PRK13238 131 --AHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAK 208 (460)
T ss_pred --HHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHH
Confidence 34567899999998853 23 49999999999865434789999999999998 7765 578999999
Q ss_pred hcCCCcEEEEeeeeccC-----------ceeeccc------cccceEEEecCCCcccCCCcceeeeeC-HHHHHHhccCC
Q 017726 165 EYRHPALFLVDGVSSIC-----------AIDFRMD------EWGIDVALTGSQKALSLPTGMGIVCAS-PKALEASKTAK 226 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~-----------~~~~~~~------~~~~d~~~~s~~K~~~g~~g~g~~~~~-~~~~~~~~~~~ 226 (367)
+ +|++||+|+++... ....+.. ....|++++|++|.+.++.| |+++.+ +++++++....
T Consensus 209 ~--~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~ 285 (460)
T PRK13238 209 K--YGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLC 285 (460)
T ss_pred H--cCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcc
Confidence 9 99999999987432 1111111 01379999999998877776 888888 57777776432
Q ss_pred CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
... .|..+...++...+.|+..++....++ ...+...+++++|.+.|++.|+++..| .++
T Consensus 286 ~~~-------------~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~G~~~~~p----~Gg 345 (460)
T PRK13238 286 ILY-------------EGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEAGVPIQTP----AGG 345 (460)
T ss_pred ccc-------------CCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHCCCCeEcc----CCc
Confidence 110 010012223443345555555543232 122233446799999999999999987 455
Q ss_pred ceEEEEcCC--------CCCHHHHHHHHHhhCCeEEccCCC------CCC-------CcEEEEeecC---CCCHHHHHHh
Q 017726 307 TVTAVIVPS--------HINSSEIVRRAWQRYNLSLGLGLN------KVA-------GKVFRIGHLG---HLNEVMFNFQ 362 (367)
Q Consensus 307 ~~~~~~~~~--------~~~~~~l~~~L~~~~gv~v~~g~~------~~~-------~~~iRi~~~~---~~~~~~~~~~ 362 (367)
+++++++.+ +.+..+++.+|.++.||.+.++.. +.. ...+|+++.- +.+..|...+
T Consensus 346 ~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~ 425 (460)
T PRK13238 346 HAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAE 425 (460)
T ss_pred eEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHH
Confidence 667777632 124578999999999999987632 111 2569999754 4555565555
Q ss_pred hhh
Q 017726 363 LLF 365 (367)
Q Consensus 363 ~l~ 365 (367)
.|.
T Consensus 426 ~l~ 428 (460)
T PRK13238 426 ALK 428 (460)
T ss_pred HHH
Confidence 554
No 147
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.2e-26 Score=211.21 Aligned_cols=308 Identities=16% Similarity=0.156 Sum_probs=205.3
Q ss_pred ChHHHHHHHccC-CC-CCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC-CCCeEEEEeCCcch
Q 017726 20 IPDQVIRAMNRN-NE-DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRIISFLIGQFS 96 (367)
Q Consensus 20 ~~~~v~~a~~~~-~~-~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~-~gd~vl~~~~~~~~ 96 (367)
+++.+.+++.+. .. ...+|. ....++++.++++++.+. ++++++|++++..++.+++. +||.|+++++.|++
T Consensus 18 ~~~~~~~a~~~~~~~~~~~~~~--~~~~~l~~~la~~~~~~~---~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~ 92 (353)
T PLN02721 18 PTDAMRAAMANAEVDDDVLGYD--PTALRLEEEMAKIFGKEA---ALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIH 92 (353)
T ss_pred CCHHHHHHHHhccCCCcccCCC--HHHHHHHHHHHHHhCCce---eEEecCccHHHHHHHHHHccCCCCeEEEcCcccee
Confidence 467778888763 11 122333 447899999999999864 46667788887777777676 99999999998765
Q ss_pred HHH-HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC---CCCccEEEEEec-CCCcccccc---HHHHHHHHHhcCC
Q 017726 97 LLW-IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT---AHTIKAICIVHN-ETATGVTNN---LSKVRKLLDEYRH 168 (367)
Q Consensus 97 ~~~-~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~---~~~~~lv~~~~~-~n~tG~~~~---~~~i~~~~~~~~~ 168 (367)
..- ...+...|++++.++.++++.+|+|++++++++.. .+++++|+++++ +||+|.++| +++|.++|++ +
T Consensus 93 ~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~--~ 170 (353)
T PLN02721 93 LYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR--H 170 (353)
T ss_pred hhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH--c
Confidence 431 12567789999999988778899999999997421 026799999875 678999887 6789999999 9
Q ss_pred CcEEEEeeeeccCce---eeccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 169 PALFLVDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 169 ~~~vi~D~~~~~~~~---~~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
|+++++|+++.++.. ..+.. ..++|+++.|+||+++++.| ++++.++++++.+..... ...
T Consensus 171 g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~-------------~~~ 236 (353)
T PLN02721 171 GLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVG-SVIVGSKSFIRKAKRLRK-------------TLG 236 (353)
T ss_pred CCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCcee-eEEecCHHHHHhHHHHHH-------------hcC
Confidence 999999999865431 11111 22678889999999976554 457788888776553210 000
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcc-ccCCCccCCCceEEEEcCCC--CCH
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN-CTQKEEWFSDTVTAVIVPSH--INS 319 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~~~~--~~~ 319 (367)
+. +......+. +++..+.+. +++ .++..++++++.+.|+++ ++.+ ..+ ...+++++++++. .+.
T Consensus 237 ~~-----~~~~~~~~~-~~~~~l~~~-~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 304 (353)
T PLN02721 237 GG-----MRQVGVLAA-AALVALQEN-VPK-LEDDHKKAKLLAEGLNQIKGLRVNVAA----VETNIVYFDITDGSRITA 304 (353)
T ss_pred CC-----eehhHHHHH-HHHHHHHHH-HHH-HHHHHHHHHHHHHHHHhCCCcEEecCC----ccceEEEEEccCCccccH
Confidence 11 111111111 122222221 222 334467788999999998 7654 332 1234677887543 467
Q ss_pred HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCH--HHHHHhhhh
Q 017726 320 SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNE--VMFNFQLLF 365 (367)
Q Consensus 320 ~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~--~~~~~~~l~ 365 (367)
.+++++|. ++||.++++. ..++|+++....+. .+....+|+
T Consensus 305 ~~~~~~L~-~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~ 347 (353)
T PLN02721 305 EKLCKSLE-EHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQ 347 (353)
T ss_pred HHHHHHHH-hCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHH
Confidence 89999997 5599999763 35799998644444 344444443
No 148
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=208.75 Aligned_cols=295 Identities=13% Similarity=0.089 Sum_probs=209.4
Q ss_pred CCCCChHHHHHHHccCCCC---CCCCcHHHHHHHHHHHHHHHhc---CCCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 16 GPVHIPDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFK---TTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~~---~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.|.++|+.+++++.+.... ++++. ....++|+.++++++ .++ ++|++|+|+++++..++.++ |.|++
T Consensus 29 ~~~~~p~~~~~~~~~~~~~~~~~~Y~~--~~~~~Lr~aia~~~~~~~~~~-~~i~it~Ga~~~i~~~~~~~----d~v~v 101 (335)
T PRK14808 29 NPFPFPEDLVDEVFRRLNSDTLRIYYD--SPDEELIEKILSYLDTDFLSK-NNVSVGNGADEIIYVMMLMF----DRSVF 101 (335)
T ss_pred CCCCCCHHHHHHHHHHhhhhhhhcCCC--CChHHHHHHHHHHhCCCCCCc-ceEEEcCCHHHHHHHHHHHh----CcEEE
Confidence 4667788889988774322 22233 246789999999998 544 45999999999999998876 67999
Q ss_pred EeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCC
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~ 169 (367)
.+|.|+.+ ...++..|.+++.++.+.++.++.+. + .+++++++++||||||.+++.+++.+++ + ++
T Consensus 102 ~~P~y~~~--~~~~~~~g~~~~~v~~~~~~~~~~~~----~-----~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~--~~ 167 (335)
T PRK14808 102 FPPTYSCY--RIFAKAVGAKFLEVPLTKDLRIPEVN----V-----GEGDVVFIPNPNNPTGHVFEREEIERIL-K--TG 167 (335)
T ss_pred CCCCHHHH--HHHHHHcCCeEEEecCCCcCCCChhH----c-----cCCCEEEEeCCCCCCCCCcCHHHHHHHH-h--cC
Confidence 98876654 36688899999999988766554322 2 2458999999999999999999999998 4 78
Q ss_pred cEEEEeeeeccCce-e-ec-cccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCC
Q 017726 170 ALFLVDGVSSICAI-D-FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT 245 (367)
Q Consensus 170 ~~vi~D~~~~~~~~-~-~~-~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
++||+|++|..... . .+ .......+++.|+||.++ ...++|++++++++++++.....
T Consensus 168 ~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~------------------ 229 (335)
T PRK14808 168 AFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRL------------------ 229 (335)
T ss_pred CEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcC------------------
Confidence 99999999874321 1 11 112234688899999995 22337999999999888864321
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHH
Q 017726 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRR 325 (367)
Q Consensus 246 ~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (367)
+++.+.....+...++... +. +++..+...++++.+.+.|++.|+.+..+ .+ .+++++++ +.+..++.++
T Consensus 230 --~~~~~~~~q~a~~~~l~~~-~~-~~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~g-~f~~~~l~-~~~~~~~~~~ 299 (335)
T PRK14808 230 --PFNVSYVSQMFAKVALDHR-EI-FEERTKFIVEERERMKSALREMGYRITDS----RG-NFVFIFME-KEEKERLLEH 299 (335)
T ss_pred --CCCCCHHHHHHHHHHHhCH-HH-HHHHHHHHHHHHHHHHHHHHHCCCEECCC----CC-eEEEEeCC-CccHHHHHHH
Confidence 1223333334444444422 11 45556677777889999999988777665 34 46788885 3456788888
Q ss_pred HHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 326 AWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 326 L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
|.+ +||.|+. + ..++||+ .+..++.+.+.+.|++
T Consensus 300 l~~-~Gi~V~~-~----~~~~Ris-i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 300 LRA-KNIAVRS-F----REGVRIT-IGKREENDMILKELEV 333 (335)
T ss_pred HHH-CCeEEEE-C----CCCeEEe-cCCHHHHHHHHHHHHh
Confidence 865 5999985 2 2579999 4666777777777654
No 149
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=8.9e-26 Score=207.98 Aligned_cols=307 Identities=18% Similarity=0.130 Sum_probs=213.2
Q ss_pred ChHHHHHHHccCCCC----CC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 20 IPDQVIRAMNRNNED----YR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.++.+++++.+.... .. .........++++.++++++.+ + .+++++|++++..++..++++||.|++.+
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~--~-~i~~~~g~~~~~~~l~~~~~~gd~V~~~~ 130 (385)
T PRK05958 54 RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAE--R-ALLFSSGYAANLAVLTALAGKGDLIVSDK 130 (385)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC--c-EEEECcHHHHHHHHHHHhCCCCCEEEEeC
Confidence 355677777664321 11 1123466889999999999842 3 45556778888777778889999999998
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcE
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPAL 171 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~ 171 (367)
+.|++.. ..++..|.+++.++.. |++++++++++.. ++++++++.+++|++|...++++|.++|++ +|++
T Consensus 131 ~~~~~~~--~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~-~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~--~~~~ 200 (385)
T PRK05958 131 LNHASLI--DGARLSRARVRRYPHN-----DVDALEALLAKWR-AGRALIVTESVFSMDGDLAPLAELVALARR--HGAW 200 (385)
T ss_pred ccCHHHH--HHHHhcCCceEEeCCC-----CHHHHHHHHHhcc-CCCeEEEEEecccCCCCcCCHHHHHHHHHH--hCCE
Confidence 8776643 3456678888888753 7899999987532 235677777899999999999999999999 9999
Q ss_pred EEEeeeeccCceee---------ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 172 FLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 172 vi~D~~~~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+|+|++|+.+.... .......++++.|++|+++ +.| |+++.++++.+.+...... ...
T Consensus 201 li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~~-~~~---------- 267 (385)
T PRK05958 201 LLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SSG-AAVLGSETLIDYLINRARP-FIF---------- 267 (385)
T ss_pred EEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cCC-cEEEcCHHHHHHHHHhCcc-cee----------
Confidence 99999997653320 1222234588999999994 666 8888898887766432110 000
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHH
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (367)
....+..+++++.++++.+.+. +++.+++.++++++.+.|++.|+++..+ .+.++++.+++..+..++
T Consensus 268 -----~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 335 (385)
T PRK05958 268 -----TTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS-----QSAIQPLIVGDNERALAL 335 (385)
T ss_pred -----cCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC-----CCCEEEEEeCCHHHHHHH
Confidence 1124445556666777776543 5678899999999999999988776554 334677777543456789
Q ss_pred HHHHHhhCCeEEccCCCC---CCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 323 VRRAWQRYNLSLGLGLNK---VAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~---~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
+++|.+ +||.+.++..+ ....++||++....+++ +...+.|+
T Consensus 336 ~~~l~~-~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~ 382 (385)
T PRK05958 336 AAALQE-QGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALA 382 (385)
T ss_pred HHHHHH-CCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 999975 49999864222 12357999987655544 44444443
No 150
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=2e-26 Score=213.69 Aligned_cols=283 Identities=13% Similarity=0.100 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHhcC------C-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEe
Q 017726 42 ALTKTLLEDIKKIFKT------T-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE 114 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~------~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 114 (367)
.+..++|+.++++++. + .+++|++|+|+++++..++.+++.|||.|+++.|.|+.+.. .+....|++++.|+
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~-~~~~~~g~~vv~v~ 173 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDR-DLRWRTGVKIVPIH 173 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH-HHHhcCCcEEEEEe
Confidence 4567888888888751 1 33569999999999999999999999999999997766532 23335789999998
Q ss_pred CCCC--CCCCHHHHHHHHhcc--CCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCcee---
Q 017726 115 SDWG--EGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID--- 184 (367)
Q Consensus 115 ~~~~--~~~d~e~l~~~i~~~--~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~--- 184 (367)
++.+ +.+|++.+++++++. ...++|++++++|+||||.+++ ++++.++|++ +|+++|+|++|+.....
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~--~~i~lI~DEiYa~~~f~~~~ 251 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVR--KNIHLVSDEIYSGSVFSASE 251 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHH--CCCEEEEeccccccccCCCC
Confidence 8643 468999999988741 1147899999999999999997 5678888888 99999999999753221
Q ss_pred e-ccc---------c-ccceEEEecCCCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 185 F-RMD---------E-WGIDVALTGSQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 185 ~-~~~---------~-~~~d~~~~s~~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+ +.. . ....+++.|+||.|+ .+| +|+++. ++++++.+.... . +. .
T Consensus 252 f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg-~~GlRvG~ivs~n~~l~~~~~~~~------------------~-~~-~ 310 (447)
T PLN02607 252 FVSVAEIVEARGYKGVAERVHIVYSLSKDLG-LPGFRVGTIYSYNDKVVTTARRMS------------------S-FT-L 310 (447)
T ss_pred cccHHHHHhhcCCCCCcCcEEEEEcchhcCC-CCcceEEEEEEcCHHHHHHHHHHh------------------h-cC-C
Confidence 1 110 0 134578899999984 444 699998 555555443210 0 01 1
Q ss_pred CcHHHHHHHHHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC-----C-HHHH
Q 017726 251 PSIQLLYGLRAALDL--IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI-----N-SSEI 322 (367)
Q Consensus 251 ~~~~~~~al~~al~~--~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~l 322 (367)
.+.....++...+.. +.+.-+++.++++.+..+.+.+.|++.|+++..+ .++.++|+++++.. + ..++
T Consensus 311 ~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~----~ag~fvw~~L~~~~~~~~~~~e~~l 386 (447)
T PLN02607 311 VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKG----NAGLFCWMNLSPLLETPTREGELAL 386 (447)
T ss_pred CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC----CeeEEEEEEchHhhcCCCchhHHHH
Confidence 222222222222221 0111145667788888899999999988877665 56778899985322 1 2467
Q ss_pred HHHHHhhCCeEEccCCCC--CCCcEEEEeecC
Q 017726 323 VRRAWQRYNLSLGLGLNK--VAGKVFRIGHLG 352 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~ 352 (367)
.++|.+++||.+.||..+ ..++++||++..
T Consensus 387 ~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~ 418 (447)
T PLN02607 387 WDSILREVKLNISPGSSCHCSEPGWFRVCFAN 418 (447)
T ss_pred HHHHHHhCCEEEcCccccCCCCCCEEEEEecc
Confidence 778877789999998543 345789999764
No 151
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.96 E-value=1.9e-26 Score=207.22 Aligned_cols=268 Identities=15% Similarity=0.097 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCH
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL 123 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 123 (367)
..++|+.+++++|.++ +++++|+|+++++..+... +.+| +|++.+|.|..+ ...++..|++++.++ |+
T Consensus 49 ~~~lr~~la~~~~~~~-~~i~~t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~--~~~~~~~g~~~~~~~-------d~ 116 (330)
T TIGR01140 49 YDELRAAAAAYYGLPA-ASVLPVNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEY--ARAWRAAGHEVVELP-------DL 116 (330)
T ss_pred HHHHHHHHHHHhCCCh-hhEEECCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHH--HHHHHHcCCEEEEeC-------CH
Confidence 3899999999999865 3599999999999987655 5677 688888876654 355778899988887 78
Q ss_pred HHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCceeeccc----cccceEEE
Q 017726 124 DVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD----EWGIDVAL 196 (367)
Q Consensus 124 e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~----~~~~d~~~ 196 (367)
+++++.+. +++++++++|+||||.++| +++|.++|++ +|++||+|++|.......+.. ..+.++++
T Consensus 117 ~~l~~~~~-----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~--~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~ 189 (330)
T TIGR01140 117 DRLPAALE-----ELDVLVLCNPNNPTGRLIPPETLLALAARLRA--RGGWLVVDEAFIDFTPDASLAPQAARFPGLVVL 189 (330)
T ss_pred HHHHhhcc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHh--cCCEEEEECcccccCCccchhhHhccCCCEEEE
Confidence 99988874 3579999999999999998 5556677777 999999999986443221211 12467999
Q ss_pred ecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHH
Q 017726 197 TGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LEN 273 (367)
Q Consensus 197 ~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~ 273 (367)
.|++|+++ ++| +|++++++++++++..... .++.+.. ++.++.+.+.+.+ .++
T Consensus 190 ~S~SK~~g-~~G~R~G~i~~~~~~~~~l~~~~~--------------------~~~~s~~---~q~~~~~~l~~~~~~~~ 245 (330)
T TIGR01140 190 RSLTKFFG-LAGLRLGFVVAHPALLARLREALG--------------------PWTVNGP---ARAAGRAALADTAWQAA 245 (330)
T ss_pred Eecchhhc-CchhhhhheeCCHHHHHHHHhcCC--------------------CCCchHH---HHHHHHHHHhchHHHHH
Confidence 99999995 445 6999999999888764321 2234443 3344444444333 467
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEee
Q 017726 274 VIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGH 350 (367)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~ 350 (367)
++++++.+++++.+.|++++ +++.++ .+.++|+.++ +..+++++|.+ +||.+.+|..+ ..+.++||++
T Consensus 246 ~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~f~~~~~~---~~~~l~~~l~~-~gi~v~pg~~f~~~~~~~iRi~~ 316 (330)
T TIGR01140 246 TRARLAAERARLAALLARLGGLEVVGG-----TALFLLVRTP---DAAALHEALAR-RGILIRDFDNFPGLDPRYLRFAL 316 (330)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceECCC-----CCeEEEEEcC---CHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEe
Confidence 78899999999999999985 554432 3456777764 45789999976 59999998653 2346899997
Q ss_pred cCCCCHHHHHHhhh
Q 017726 351 LGHLNEVMFNFQLL 364 (367)
Q Consensus 351 ~~~~~~~~~~~~~l 364 (367)
....++ +.+..+|
T Consensus 317 ~~~~~~-~~~~~~l 329 (330)
T TIGR01140 317 PTDEEN-DRLEEAL 329 (330)
T ss_pred cCHHHH-HHHHHhh
Confidence 554433 5555544
No 152
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.96 E-value=6.1e-26 Score=209.69 Aligned_cols=318 Identities=15% Similarity=0.133 Sum_probs=215.5
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCCCCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
+-+|.|+-...++.+-+++.+++.++.....+ +...+...++++.+++++|.+. .+++++|++|+..++..+.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~---~l~~~sG~~an~~ai~~l~ 126 (402)
T TIGR01821 50 WCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES---ALVFTSGYVANDATLATLA 126 (402)
T ss_pred eEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe---EEEECchHHHHHHHHHHhh
Confidence 34566666666666667777777665433211 1234567899999999999532 5666888999998887654
Q ss_pred C--CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHH
Q 017726 82 S--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV 159 (367)
Q Consensus 82 ~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i 159 (367)
. +++.|+.....|.+. . ..+...|+++..++. .|+++++++++....+++++|++++++||+|.+.|+++|
T Consensus 127 ~~~~~~~v~~~~~~h~s~-~-~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i 199 (402)
T TIGR01821 127 KIIPGCVIFSDELNHASM-I-EGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEI 199 (402)
T ss_pred CCCCCCEEEEcchHhHHH-H-HHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHH
Confidence 3 566555443433332 2 334566777665543 277888888864321367999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee------eccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID------FRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~------~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
.++|++ +|+++++|++|+.|... .... ....|+++.+++|.++ ..| |++++++++++.+...... +.
T Consensus 200 ~~l~~~--~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~G-G~i~~~~~~~~~l~~~~~~-~~ 274 (402)
T TIGR01821 200 CDLADK--YGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVG-GYIAASRKLIDAIRSYAPG-FI 274 (402)
T ss_pred HHHHHH--cCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCC-ceeecCHHHHHHHHHhCcC-ce
Confidence 999999 99999999999855321 0000 1136899999999995 555 8888999988777532111 00
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 311 (367)
+..+.+...+++..++++.+.+. +.++++.+++++++.+.|+++|+++..+ .++ ++.+
T Consensus 275 ---------------~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-i~~i 332 (402)
T TIGR01821 275 ---------------FTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN----PSH-IVPV 332 (402)
T ss_pred ---------------ecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC----CCC-EEEE
Confidence 11235555556677788877654 4566677899999999999998877664 233 5556
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHHHHH
Q 017726 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~~~~ 360 (367)
.+++.....++.+.|.+++||.+.+...+. ...++||++....+.+|+.
T Consensus 333 ~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~ 384 (402)
T TIGR01821 333 IIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMID 384 (402)
T ss_pred EeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 553322356788888766799998753322 2357999998777665543
No 153
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=2.9e-26 Score=214.61 Aligned_cols=308 Identities=13% Similarity=0.064 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCC
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESD 116 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~ 116 (367)
..+...++++++++++|.+.. ++++++||++++..++.++ ..+||+|+++++.|+++. +...++..|++++.++.+
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~-~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~ 188 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVA-NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE 188 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcc-eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence 345566777899999999865 4889999999999888776 478999999999887764 334456679999999998
Q ss_pred CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE--eeeeccCceeeccccccceE
Q 017726 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV--DGVSSICAIDFRMDEWGIDV 194 (367)
Q Consensus 117 ~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~--D~~~~~~~~~~~~~~~~~d~ 194 (367)
++ .+|+++++++++ +++++|++++| |+||.+.|+++|.++|++ +|+++++ |.. +.+... ....+++|+
T Consensus 189 ~~-~~d~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~--~~~~~iv~~d~~-~~g~~~-~~~~~~~D~ 258 (447)
T PRK00451 189 DG-VTDLEALEAAVD----DDTAAVVVQYP-NFFGVIEDLEEIAEIAHA--GGALFIVGVDPV-SLGLLK-PPGEYGADI 258 (447)
T ss_pred CC-CCCHHHHHHhcC----CCeEEEEEECC-CCCCeeCCHHHHHHHHHH--CCCEEEEEcChH-HhccCC-CcccCCCCE
Confidence 77 899999999997 46799999998 899999999999999999 9999988 544 333332 234568999
Q ss_pred EEecCCCc-----ccCCCcceeeeeCHHHHHHhccCCCCc---------eeech--HHHHHHhhcCCccCCCCcHHHHHH
Q 017726 195 ALTGSQKA-----LSLPTGMGIVCASPKALEASKTAKSVR---------VFFDW--KDYIKFYNLGTFWPYTPSIQLLYG 258 (367)
Q Consensus 195 ~~~s~~K~-----~~g~~g~g~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a 258 (367)
++++++|+ ++| +|+|++++++++++.+.+..... +.... .....+++.++....+.......+
T Consensus 259 ~~~s~~k~~~~~~~~G-pg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 337 (447)
T PRK00451 259 VVGEGQPLGIPLSFGG-PYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALA 337 (447)
T ss_pred EEECCCcCCCCCCCCC-CCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHH
Confidence 99998886 544 47899999999988764321111 11110 011112232321111111122123
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc-c
Q 017726 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-L 336 (367)
Q Consensus 259 l~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~-~ 336 (367)
...+++.+.++|++++.+++.++++++.+.|+++ |+++... . ....+.++++ .+..+++++|.++ ||.+. +
T Consensus 338 aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~---~~~~~~v~~~--~~~~~~~~~L~~~-gi~~~~~ 410 (447)
T PRK00451 338 AAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDG-P---FFNEFVVRLP--KPAEEVNEALLEK-GILGGYD 410 (447)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCC-C---eEEEEEEecC--CCHHHHHHHHHhc-CCCCCcc
Confidence 3334566667789999999999999999999998 6777521 1 1112335542 3578999999765 66532 2
Q ss_pred CC--CCCCCcEEEEeecCCCC--HHHHHHhhhhc
Q 017726 337 GL--NKVAGKVFRIGHLGHLN--EVMFNFQLLFQ 366 (367)
Q Consensus 337 g~--~~~~~~~iRi~~~~~~~--~~~~~~~~l~~ 366 (367)
+. .+....++|+++....+ +.+.+.++|++
T Consensus 411 ~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~ 444 (447)
T PRK00451 411 LGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE 444 (447)
T ss_pred cccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 21 12123579999865444 45555555543
No 154
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.96 E-value=8.9e-26 Score=210.84 Aligned_cols=312 Identities=19% Similarity=0.143 Sum_probs=216.7
Q ss_pred CCCcHHHHHHHHHHHHHHHhcC------------CCCceEEecCChhHHHHHHHHcc----CC-----------------
Q 017726 36 RSPAVPALTKTLLEDIKKIFKT------------TSGTPFLIPTTGTGAWESALTNT----LS----------------- 82 (367)
Q Consensus 36 ~~~~~~~~~~~~~~~la~~~~~------------~~~~~v~~~~ggt~al~~~~~~~----~~----------------- 82 (367)
.+|....+..++.++++++++. +.....++|+|||+|+..++.+. +.
T Consensus 123 ~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 123 TSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 3677778888999999999852 22233688999999998876431 11
Q ss_pred -----CCCeEEEEeCCcchHHHHHHHHHhCC---ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE--EEEecCCCccc
Q 017726 83 -----PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDWGEGAKLDVLASKLAADTAHTIKAI--CIVHNETATGV 152 (367)
Q Consensus 83 -----~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv--~~~~~~n~tG~ 152 (367)
++..|+++..+|+|. .+.++.+|+ +++.||++.++++|+++|+++|++....+++.+ +.+..++.||.
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~--~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGa 280 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSL--GKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGN 280 (522)
T ss_pred hhccCCceEEEECCCchHHH--HHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCC
Confidence 234677777888874 466777887 799999999999999999999974211233444 44466789999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeec-----cccc-cceEEEecCCCcccCCCcceeeeeCH-HHHHHhccC
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-----MDEW-GIDVALTGSQKALSLPTGMGIVCASP-KALEASKTA 225 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~g~~g~g~~~~~~-~~~~~~~~~ 225 (367)
+.|+++|.++|++ +|+|+++|++++.+.+..+ +... ++|++++++|||+.+|.|+|++++++ +..+.+...
T Consensus 281 iDpl~eIa~i~~~--~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~ 358 (522)
T TIGR03799 281 IDPLDEMADIAQE--LGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHH 358 (522)
T ss_pred cCCHHHHHHHHHH--cCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccC
Confidence 9999999999999 9999999999987665443 3332 68999999999999999999999875 444444321
Q ss_pred CCCceee---chHH-HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCC
Q 017726 226 KSVRVFF---DWKD-YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK 300 (367)
Q Consensus 226 ~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 300 (367)
..|. ...+ ....++.+ .+... +.++.+++.+...|++++.++..++++++.+.|++. +++++.+
T Consensus 359 ---~~Yl~~~~~~d~~~~~legs------R~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~- 427 (522)
T TIGR03799 359 ---AEYILRKGSKDLGSHTLEGS------RPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE- 427 (522)
T ss_pred ---cchhcCCCCCccccceeecC------cchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC-
Confidence 1111 0000 01123322 33322 468999999999999999999999999999999997 8999886
Q ss_pred CccCCCceEEEEc-CCCCC-----------------H----HHHHHHHHhhCCeEEccC-CCC----CCC-cEEEEeecC
Q 017726 301 EEWFSDTVTAVIV-PSHIN-----------------S----SEIVRRAWQRYNLSLGLG-LNK----VAG-KVFRIGHLG 352 (367)
Q Consensus 301 ~~~~~~~~~~~~~-~~~~~-----------------~----~~l~~~L~~~~gv~v~~g-~~~----~~~-~~iRi~~~~ 352 (367)
....+++|+. |.+.. . ..+.+++.+.-.+++... ..+ ..+ ..||+++.+
T Consensus 428 ---p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~n 504 (522)
T TIGR03799 428 ---PELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLAN 504 (522)
T ss_pred ---CCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecC
Confidence 2345788886 32210 1 245566655523333321 111 112 359999988
Q ss_pred CCCHHHHHHhhhh
Q 017726 353 HLNEVMFNFQLLF 365 (367)
Q Consensus 353 ~~~~~~~~~~~l~ 365 (367)
..+..+....+|+
T Consensus 505 p~tt~~~i~~~l~ 517 (522)
T TIGR03799 505 PLTTHEILQDILD 517 (522)
T ss_pred CCCCHHHHHHHHH
Confidence 8777766666665
No 155
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=207.81 Aligned_cols=295 Identities=14% Similarity=0.081 Sum_probs=202.4
Q ss_pred CCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCc
Q 017726 17 PVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQ 94 (367)
Q Consensus 17 p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~ 94 (367)
|.++++.+++++.+.... ...|. .....++|+.++++++++++ +|++|+|+++++..++..+ +||+|+++.|.|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y 104 (337)
T PRK03967 29 PFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFYGLDAE-NIAVGNGSDELISYLVKLF--EGKHIVITPPTF 104 (337)
T ss_pred CCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHhCcCcc-eEEEcCCHHHHHHHHHHHh--CCCeEEEeCCCh
Confidence 446677788887764321 12222 24567999999999998764 5999999999999887765 799999999977
Q ss_pred chHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
..+ ...++..|++++.++.+.++.+|++.+++.+ ++++++++++|+||||.+++.+++.+++ + +++++|+
T Consensus 105 ~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-----~~~~~v~~~~P~NPtG~~~~~~~l~~i~-~--~~~~ii~ 174 (337)
T PRK03967 105 GMY--SFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-----KNASAVFICSPNNPTGNLQPEEEILKVL-E--TGKPVVL 174 (337)
T ss_pred HHH--HHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-----cCCCEEEEeCCCCCCCCCCCHHHHHHHH-h--cCCEEEE
Confidence 643 3456788999999999877789999998764 3568999999999999999999999998 4 6999999
Q ss_pred eeeeccCcee--ec-cccccceEEEecCCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 175 DGVSSICAID--FR-MDEWGIDVALTGSQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 175 D~~~~~~~~~--~~-~~~~~~d~~~~s~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
|++|...... .. .......+++.|++|.++ ...++|++++++++++++..... +++
T Consensus 175 De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~--------------------~~~ 234 (337)
T PRK03967 175 DEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKP--------------------PFS 234 (337)
T ss_pred ECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcC--------------------CCC
Confidence 9998743211 01 111134688899999995 22347999999999887764321 223
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhC
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRY 330 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 330 (367)
.+.....++..++.... . ..+.+++..+.++.+.+.|.+.. . + ..+.++++++ .+.+.|.++
T Consensus 235 ~~~~~q~~~~~~l~~~~-~-~~~~~~~~~~~r~~l~~~L~~~~---~-~----~~~~~~~~~~-------~~~~~l~~~- 296 (337)
T PRK03967 235 LNILTMKIVRLALDHYD-L-IEERIDYIIKERERVRRELGEYA---Y-P----SDANFLLLKL-------DAYDYLLEN- 296 (337)
T ss_pred CCHHHHHHHHHHHhCHH-H-HHHHHHHHHHHHHHHHHHhccCc---C-C----CCCcEEEEhH-------HHHHHHHHC-
Confidence 44443344444443211 1 34444555666777777776542 1 2 2344566655 267888654
Q ss_pred CeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 331 NLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 331 gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
||.++++.. ...+++||++ +..++.+.+.++|.
T Consensus 297 gi~v~~~~~-~~~~~~Ri~~-~~~~~~~~l~~~l~ 329 (337)
T PRK03967 297 GIVVRKLSG-RLEGHIRVTV-GKREENDEFIKALK 329 (337)
T ss_pred CEEEEeCCC-CCCCeEEEec-CCHHHHHHHHHHHH
Confidence 999986532 3356899995 44455555555554
No 156
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=1.4e-25 Score=207.57 Aligned_cols=302 Identities=16% Similarity=0.094 Sum_probs=210.4
Q ss_pred ChHHHHHHHccCCCC----CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 20 IPDQVIRAMNRNNED----YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
.++.+.+++.+.... ..+ .+..+..+++++.+++++|.+ +.+++++| ++++..++.+++.+||.|++.+
T Consensus 57 ~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~ 133 (397)
T PRK06939 57 NHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDANGGLFETLLGKEDAIISDA 133 (397)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHHHHHHHHhCCCCCEEEEEh
Confidence 466677766664321 111 123467789999999999975 34666555 8899988888999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCccccccHHHHHHHHHhcCCC
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP 169 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~ 169 (367)
+.|++.. ..++..|.++..++. .|++++++.+++... .++++|+..+..|++|.+.++++|.++|++ +|
T Consensus 134 ~~~~~~~--~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~--~~ 204 (397)
T PRK06939 134 LNHASII--DGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADK--YD 204 (397)
T ss_pred hhhHHHH--HHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHH--hC
Confidence 9887754 345667888777754 378999888874211 267888888889999999999999999999 99
Q ss_pred cEEEEeeeeccCceee------ccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 170 ALFLVDGVSSICAIDF------RMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~~------~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+++|+|++|+.+.... ... ..++|++++|+||+++|++ +|++++++++++.+...... ..
T Consensus 205 ~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r-~G~v~~~~~~~~~l~~~~~~-~~---------- 272 (397)
T PRK06939 205 ALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGAS-GGYTAGRKEVIDWLRQRSRP-YL---------- 272 (397)
T ss_pred CEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccC-ceEEEeCHHHHHHHHHhCcc-cc----------
Confidence 9999999996543211 111 1146899999999997665 59999999998877642110 00
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHH
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSE 321 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (367)
...+++...+.++.++++.+.+ .+++++++.++++++.+.|+++|+++..+ ... ++.+.++.+.+..+
T Consensus 273 -----~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~-~~~~~~~~~~~~~~ 340 (397)
T PRK06939 273 -----FSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAAGFTLGPG----EHP-IIPVMLGDAKLAQE 340 (397)
T ss_pred -----ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCcCCC----CCC-EEEEEECCHHHHHH
Confidence 0112334334555666766643 35778889999999999999988766543 222 34444443345678
Q ss_pred HHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHHH
Q 017726 322 IVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~~ 358 (367)
+++.|.++ ||.+.++..+. ...++|+++...+++++
T Consensus 341 ~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~ 379 (397)
T PRK06939 341 FADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQ 379 (397)
T ss_pred HHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHH
Confidence 99999877 99988643221 23579998766555444
No 157
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=3.5e-26 Score=207.82 Aligned_cols=286 Identities=14% Similarity=0.026 Sum_probs=193.9
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh----c---CCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEE
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----K---TTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISF 90 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~----~---~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~ 90 (367)
+.++.+.+++.+... ...|.......++|+.+++++ | +++ ++|++|+|+++++..++..+ +++||.|+++
T Consensus 34 ~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~ 111 (357)
T TIGR03539 34 PVPPLIRAALAAAAD-APGYPQTWGTPELREAIVDWLERRRGVPGLDP-TAVLPVIGTKELVAWLPTLLGLGPGDTVVIP 111 (357)
T ss_pred CCCHHHHHHHHHHHh-hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-CeEEEccChHHHHHHHHHHHcCCCCCEEEEC
Confidence 346667777765432 223333344556777777766 4 434 56999999999999888776 7999999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcC
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYR 167 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~ 167 (367)
+|+|+++. ..++..|++++.++ +++.+ ++ +++++|++++|+||||.+++ +++|.++|++
T Consensus 112 ~p~y~~~~--~~~~~~g~~~~~v~-------~~~~l----~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~-- 173 (357)
T TIGR03539 112 ELAYPTYE--VGALLAGATPVAAD-------DPTEL----DP---VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARE-- 173 (357)
T ss_pred CCCcHHHH--HHHHhcCCEEeccC-------Chhhc----Cc---cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHH--
Confidence 99887654 34567888877663 23322 21 36799999999999999997 5568888888
Q ss_pred CCcEEEEeeeeccCcee------ecc----ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechH
Q 017726 168 HPALFLVDGVSSICAID------FRM----DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 168 ~~~~vi~D~~~~~~~~~------~~~----~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+|+++|+|++|...... ++. ......+++.|++|.++ .+| +|++++++++++++.....
T Consensus 174 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~-~~G~R~G~~i~~~~~~~~~~~~~~-------- 244 (357)
T TIGR03539 174 RGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSN-LAGYRAGFVAGDPALVAELLTVRK-------- 244 (357)
T ss_pred cCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccC-CCceeEEEEecCHHHHHHHHHHHh--------
Confidence 99999999998632211 110 01124588999999973 344 6999999998887753211
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
.. .+.++.....++..++.. ...+++.++.++++++++.+.|++.|+.+..+ .++.+++++++
T Consensus 245 -------~~---~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p----~~~~~~~~~~~- 307 (357)
T TIGR03539 245 -------HA---GLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS----EAGLYLWATRG- 307 (357)
T ss_pred -------hc---ccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC----CccEEEEEECC-
Confidence 01 112444333344444432 12256678888899999999999888777665 46667777764
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC--CCcEEEEeecC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV--AGKVFRIGHLG 352 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~--~~~~iRi~~~~ 352 (367)
.+..++.+.|. ++||.+.+|..+. ..+++||++..
T Consensus 308 -~~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~iRis~~~ 344 (357)
T TIGR03539 308 -EDAWDTVDRLA-ELGILVAPGDFYGPAGSQHVRVALTA 344 (357)
T ss_pred -CCHHHHHHHHH-hCCEEECCccccCCCCCCeEEEEecC
Confidence 25678888885 5599999985322 24689999765
No 158
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.9e-26 Score=213.13 Aligned_cols=316 Identities=16% Similarity=0.095 Sum_probs=195.0
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh------cC-CC--CceEEecCChhHHHHHHHHc-----cCCCCC
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF------KT-TS--GTPFLIPTTGTGAWESALTN-----TLSPGD 85 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~-~~--~~~v~~~~ggt~al~~~~~~-----~~~~gd 85 (367)
+|+.+.++.... ... .|.......++|+.+++.+ +. .. +++|++|+|+++|+..++.+ +++|||
T Consensus 114 ~~~~v~e~~~~~-~~~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD 191 (527)
T PRK09275 114 ADEFVYELVDGI-IGD-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGD 191 (527)
T ss_pred CCHHHHHHHHHH-hcC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCC
Confidence 355555533332 222 2433455567777777632 11 12 34699999999999988875 689999
Q ss_pred eEEEEeCCcchHHHHHHHHHhC--CceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHH
Q 017726 86 RIISFLIGQFSLLWIDQQQRLN--FNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSK 158 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g--~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~ 158 (367)
+|++++|.|+.+. ..++..| .+++.++.+ .++.+|.++++++++ +++|+|++++|+||||.+++ +++
T Consensus 192 ~Vlv~~P~y~~Y~--~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~----~~tkai~l~nP~NPTG~v~s~e~l~~ 265 (527)
T PRK09275 192 KIALMTPIFTPYL--EIPELPRYDLEVVHINADEENEWQYPDSELEKLRD----PSIKALFLVNPSNPPSVAMSDESLEK 265 (527)
T ss_pred EEEEeCCChHHHH--HHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC----CCCCEEEEeCCcCCcCCCCCHHHHHH
Confidence 9999999776653 4445554 555555543 347889999999876 57899999999999999998 666
Q ss_pred HHHHHHhcCCCcEEEEeeeeccCceee-ccc--cccceEEEecCCCcccCCCc--ceeeeeCHH-----HHHHhccC---
Q 017726 159 VRKLLDEYRHPALFLVDGVSSICAIDF-RMD--EWGIDVALTGSQKALSLPTG--MGIVCASPK-----ALEASKTA--- 225 (367)
Q Consensus 159 i~~~~~~~~~~~~vi~D~~~~~~~~~~-~~~--~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~-----~~~~~~~~--- 225 (367)
|.++|++++++++||+|++|....... +.. .....+++.|+||.++ .+| +|+++++++ +++.+...
T Consensus 266 I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~-mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~ 344 (527)
T PRK09275 266 IADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFG-ATGWRLGVIALHEDNVFDKLIAKLPEEKKK 344 (527)
T ss_pred HHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhcc-CcHhHHhhhhcCchhHHHHHHHhccHHHHH
Confidence 777886534799999999987543211 111 1135789999999984 555 699999886 44433100
Q ss_pred ----CCCcee--------ec-hHHHHHHhhcCCccCCCCcHHHHH-HHHHHHHHHHH--hChHHHHHHHHHHHHHHHHHH
Q 017726 226 ----KSVRVF--------FD-WKDYIKFYNLGTFWPYTPSIQLLY-GLRAALDLIFE--EGLENVIERHRRLGKATRLAV 289 (367)
Q Consensus 226 ----~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~-al~~al~~~~~--~g~~~~~~~~~~~~~~l~~~L 289 (367)
+..+.. .+ ............ +...+.+.+.. ++.+....+.. .-.+++++.++++++.+.+.|
T Consensus 345 ~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~-t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~L 423 (527)
T PRK09275 345 ELDKRYSSLTTDPEKLKFIDRLVADSRQVALNH-TAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGL 423 (527)
T ss_pred HHHhhhhhccCCcchhhhHHHHHHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHc
Confidence 000000 00 000001111111 11223332222 22112222221 115667778888888887776
Q ss_pred HHcCCcc--ccCCCccCCCceEEEEcCC----------------CCCHHHHHHHHHhhCCeEEccCCCCC-CCcEEEEee
Q 017726 290 EAWGLKN--CTQKEEWFSDTVTAVIVPS----------------HINSSEIVRRAWQRYNLSLGLGLNKV-AGKVFRIGH 350 (367)
Q Consensus 290 ~~~g~~~--~~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~~L~~~~gv~v~~g~~~~-~~~~iRi~~ 350 (367)
|+.+ ..+ .+.++++++++. ..+..+++.+|.++.||.+.||..+. ...++|||+
T Consensus 424 ---g~~~~~~~p----~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~ 496 (527)
T PRK09275 424 ---GLPEPEDPN----NAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSL 496 (527)
T ss_pred ---CCCCcCCCC----CeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEE
Confidence 4433 233 466677777632 13577899999999999999996553 346799997
Q ss_pred cC
Q 017726 351 LG 352 (367)
Q Consensus 351 ~~ 352 (367)
..
T Consensus 497 a~ 498 (527)
T PRK09275 497 AN 498 (527)
T ss_pred ec
Confidence 54
No 159
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.95 E-value=4.7e-25 Score=203.04 Aligned_cols=281 Identities=17% Similarity=0.195 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 120 (367)
.+...++++.+++++|.+. .++++ +|++++..++.+++++||.|++..+.|.+.. ..+...|+++..++ .
T Consensus 77 ~~l~~~l~~~l~~~~g~~~--~i~~~-sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~--~~~~~~g~~~~~~~-----~ 146 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTEA--ALVFQ-SGFNTNQGVLSALLRKGDIVLSDELNHASII--DGLRLTKATKKIYK-----H 146 (385)
T ss_pred cHHHHHHHHHHHHHhCCCc--EEEEC-cHHHHHHHHHHHhCCCCCEEEEEccccHHHH--HHHHhcCCceEEeC-----C
Confidence 4678889999999988643 45665 5578888888888999999998888766643 33455677766553 3
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCcee---------ecccccc
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWG 191 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~ 191 (367)
+|++++++.+.+...+++++|++++++|++|.+.|+++|.++|++ +|+++|+|++|+.+... ++.. .+
T Consensus 147 ~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~ 223 (385)
T TIGR01825 147 ADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAER--YGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DK 223 (385)
T ss_pred CCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHH--hCCEEEEECcccccCcCCCCCccHhhcCCC-cC
Confidence 688999988876432468999999999999999999999999999 99999999999765332 1222 46
Q ss_pred ceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhCh
Q 017726 192 IDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGL 271 (367)
Q Consensus 192 ~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~ 271 (367)
.|+++.|++|+++ ..| |+++.++++++.+...... +.. + ...+...++++.++++.+.+.
T Consensus 224 ~~i~~~s~sK~~~-~~g-G~~~~~~~~~~~~~~~~~~-~~~-----------~----~~~~~~~~~a~~~al~~~~~~-- 283 (385)
T TIGR01825 224 VDIQVGTLSKAIG-VVG-GYAAGHKELIEYLKNRARP-FLF-----------S----TAQPPAVVAALAAAVDELQRS-- 283 (385)
T ss_pred CcEEEEeccHHhh-cCC-CEEecCHHHHHHHHHhCcc-ccc-----------c----CCCCHHHHHHHHHHHHHHhcC--
Confidence 7899999999995 555 8899999888877532110 000 1 123444456777777766543
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEE
Q 017726 272 ENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRI 348 (367)
Q Consensus 272 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi 348 (367)
.+..++..++++++.+.|+++|+++..+. .+ ++.+..+...+..++++.|.++ ||.+.++..+. ...++|+
T Consensus 284 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~----~~-~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi 357 (385)
T TIGR01825 284 PELMERLWDNTRFFKAGLGKLGYDTGGSE----TP-ITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRN 357 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCC----CC-EEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEE
Confidence 24567778899999999999888877652 22 4555553323457899999877 99986432221 2357999
Q ss_pred eecCCCCHHHHH
Q 017726 349 GHLGHLNEVMFN 360 (367)
Q Consensus 349 ~~~~~~~~~~~~ 360 (367)
++...++++++.
T Consensus 358 ~~~~~~~~e~i~ 369 (385)
T TIGR01825 358 IPTAEHTKDDLD 369 (385)
T ss_pred EEcCCCCHHHHH
Confidence 887666665544
No 160
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=4.1e-25 Score=204.62 Aligned_cols=316 Identities=16% Similarity=0.153 Sum_probs=208.4
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCC----CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC-
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDY----RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS- 82 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~- 82 (367)
++.|+-.+.++.+-+++.+++.+..... ..+...+...++++.+++++|.+. .++.++|++++..++..+..
T Consensus 53 s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~---~~~~~sG~~an~~ai~~l~~~ 129 (407)
T PRK09064 53 SNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA---ALVFTSGYVSNDATLSTLAKL 129 (407)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc---EEEECcHHHHHHHHHHHHhCC
Confidence 4555544444444444444444443321 112345778899999999999532 45557778888877766543
Q ss_pred -CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHH
Q 017726 83 -PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRK 161 (367)
Q Consensus 83 -~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~ 161 (367)
+++.|+.....|.+ .. ..+...+.++..++. .|+++++++++..+.+++++|++++++|++|.+.|+++|.+
T Consensus 130 ~~~~~i~~~~~~h~s-~~-~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~ 202 (407)
T PRK09064 130 IPDCVIFSDELNHAS-MI-EGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICD 202 (407)
T ss_pred CCCCEEEEeCcchHH-HH-HHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHH
Confidence 66544444333333 22 334556777665554 27888888886432146799999999999999999999999
Q ss_pred HHHhcCCCcEEEEeeeeccCcee-----e-cccc--ccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 162 LLDEYRHPALFLVDGVSSICAID-----F-RMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 162 ~~~~~~~~~~vi~D~~~~~~~~~-----~-~~~~--~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+|++ +|+++++|++|+.|... + .... ...|+++.+++|.++ ..| |++++++++++.+.....+ +.
T Consensus 203 l~~~--~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~G-G~~~~~~~~~~~l~~~~~~-~~-- 275 (407)
T PRK09064 203 LADK--YNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFG-VMG-GYIAGSAALVDAVRSYAPG-FI-- 275 (407)
T ss_pred HHHH--cCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhh-ccC-ceEecCHHHHHHHHHhCcc-cc--
Confidence 9999 99999999999754321 0 1111 146899999999994 666 8999999988776532111 00
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
+..+.+...+++..++++.+.+. ...+++..++++++.+.|+++|++++.+ .+ .++.+.+
T Consensus 276 -------------~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~-~iv~i~~ 335 (407)
T PRK09064 276 -------------FTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN----ES-HIVPVMV 335 (407)
T ss_pred -------------ccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC----CC-CEEEEEe
Confidence 01124444556666778777665 3456788999999999999998887664 23 3556666
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHHHHH
Q 017726 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 314 ~~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~~~~ 360 (367)
++..+..++.++|.+++||.+.+...+. ...++||++...++.+|+.
T Consensus 336 ~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~ 385 (407)
T PRK09064 336 GDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMID 385 (407)
T ss_pred CCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 4333467899988766799998753322 2357999988777665444
No 161
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=8e-26 Score=222.12 Aligned_cols=306 Identities=12% Similarity=0.056 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh----HHHHHHHHccCCC-CC----eEEEEeCCcchHHHHHHHHHhCCce
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT----GAWESALTNTLSP-GD----RIISFLIGQFSLLWIDQQQRLNFNV 110 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt----~al~~~~~~~~~~-gd----~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (367)
+.+...++|+.+++++|. +.|.|+++++ +++.+++.++.++ || .|+++..+|.++. ..+...|+++
T Consensus 566 ~~~~~~~~r~~la~i~g~---~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~--a~a~~~G~~v 640 (993)
T PLN02414 566 YQEMFEDLGDLLCEITGF---DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNP--ASAAMCGMKI 640 (993)
T ss_pred HHHHHHHHHHHHHHHhCC---CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCH--HHHHHCCCEE
Confidence 567788999999999998 3499999998 8999999998766 87 8999999999875 2234479999
Q ss_pred EEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCc-eeecccc
Q 017726 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA-IDFRMDE 189 (367)
Q Consensus 111 ~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~-~~~~~~~ 189 (367)
+.++++.++.+|+++|++++++++ +++++|++++|+|.+|...|+++|.++||+ +|+++++|+++..+. ...++.+
T Consensus 641 v~v~~d~~G~vDle~L~~~i~~~~-~~ta~V~vt~pSn~gg~e~~I~eI~~iah~--~Galv~vDgAq~~a~~~l~~p~~ 717 (993)
T PLN02414 641 VVVGTDAKGNINIEELRKAAEAHK-DNLAALMVTYPSTHGVYEEGIDEICDIIHD--NGGQVYMDGANMNAQVGLTSPGF 717 (993)
T ss_pred EEeccCCCCCcCHHHHHHHHhccC-CCeEEEEEECCCccccccchHHHHHHHHHH--cCCEEEEEecCHHhccCcCCccc
Confidence 999998889999999999998654 478999999999999999999999999999 999999999998766 3445567
Q ss_pred ccceEEEecCCCcccCCC-----cceeeeeCHHHHHHhccCCCCceeechHHHHHHhh---cCCccCCCCcH---HHHHH
Q 017726 190 WGIDVALTGSQKALSLPT-----GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN---LGTFWPYTPSI---QLLYG 258 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~~-----g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~a 258 (367)
.|+|++++|.||+|++|. |+|++++++.+...+..+...... . +..+++ .|+ ....+. ..+..
T Consensus 718 ~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~-~---~~~r~~~s~iGt--~~~a~~g~al~l~~ 791 (993)
T PLN02414 718 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG-G---IPRPEKTQPLGT--ISAAPWGSALILPI 791 (993)
T ss_pred cCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC-C---cccccCCCCcCC--ccchhhhhHHHHHH
Confidence 899999999999998664 489999999887766644211100 0 011111 122 111122 22233
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEE-cCC--CCCHHHHHHHHHhhCCeEE
Q 017726 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI-VPS--HINSSEIVRRAWQRYNLSL 334 (367)
Q Consensus 259 l~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~L~~~~gv~v 334 (367)
....+..+..+|+++..++...+++|++++|++. ++....+.+....-+++.++ +++ +.+..++.++|. ++||..
T Consensus 792 A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Giha 870 (993)
T PLN02414 792 SYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHA 870 (993)
T ss_pred HHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEE
Confidence 3333444555678888999999999999999884 44443322111111122222 211 366789999998 668875
Q ss_pred ccCCCCCCCcEEEEeecCCCCHHHHHH
Q 017726 335 GLGLNKVAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 335 ~~g~~~~~~~~iRi~~~~~~~~~~~~~ 361 (367)
..-..+ ..+.+||+..-+++.+|+++
T Consensus 871 pt~~~p-v~~~lmiepTE~~skeelDr 896 (993)
T PLN02414 871 PTMSWP-VPGTLMIEPTESESKAELDR 896 (993)
T ss_pred eeeccc-cCCEEEEEeeeeCCHHHHHH
Confidence 431222 35679999888887665543
No 162
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2e-25 Score=189.99 Aligned_cols=313 Identities=12% Similarity=0.049 Sum_probs=223.2
Q ss_pred CChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCC-----CCceEEecCChhHHHHHHHHccCCCCCeEEEEe
Q 017726 19 HIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPFLIPTTGTGAWESALTNTLSPGDRIISFL 91 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~ 91 (367)
++.+.+.+|+.+.... ..+|.+..+...+|+++|++++-+ .+++|++|+|.++|+++++.++.+||..|+++.
T Consensus 78 ~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPr 157 (447)
T KOG0259|consen 78 RTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPR 157 (447)
T ss_pred cCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCC
Confidence 4567777777775444 446667788889999999997643 345699999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhc
Q 017726 92 IGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEY 166 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~ 166 (367)
|+++-+. ..++..|++++..+.- .+|.+|++.+|++++| +|.++++.+|+||.|.+++ +++|++.|++
T Consensus 158 PGfp~Y~--~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE----NT~AivviNP~NPcGnVys~~HL~kiae~A~k- 230 (447)
T KOG0259|consen 158 PGFPLYD--TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE----NTVAIVVINPNNPCGNVYSEDHLKKIAETAKK- 230 (447)
T ss_pred CCCchHH--HhhhhcCceeEeecccCcccceechHHHHHhhcc----CeeEEEEeCCCCCCcccccHHHHHHHHHHHHH-
Confidence 9876543 4577889999988763 4689999999999996 5599999999999999986 8899999999
Q ss_pred CCCcEEEEeeeeccCce---e-eccc---cccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 167 RHPALFLVDGVSSICAI---D-FRMD---EWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~---~-~~~~---~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++++||.|+.|..... + +++. ..-..+.+++.+|.+- -+| +|+++..+..- .+.... . .+..
T Consensus 231 -lgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~-VPGWRlGWi~~hD~~g-vf~~~~----~--~q~~ 301 (447)
T KOG0259|consen 231 -LGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWI-VPGWRLGWIALHDPRG-VFRDTK----V--VQGI 301 (447)
T ss_pred -hCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccc-cCCceeeeEEEecccc-cccchH----H--HHHH
Confidence 9999999999864322 1 1222 2234577788889775 444 79988765420 011000 0 0111
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCccCCCceEEEEcC-
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLK-NCTQKEEWFSDTVTAVIVP- 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~- 314 (367)
.+.++.. + .|+.....|+..-|....++-.+....-...+++...++|++. ++. ...| .+..+.++.+.
T Consensus 302 ~~~~~~~---~-~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kP----eg~mylmv~l~~ 373 (447)
T KOG0259|consen 302 KNFLDII---P-GPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKP----EGCMYLMVKLNL 373 (447)
T ss_pred HHHHhcc---C-CccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCC----CcceEEEeccch
Confidence 1112211 1 2444333344433333333336777888899999999999997 776 4445 35556666652
Q ss_pred ----CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCC
Q 017726 315 ----SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355 (367)
Q Consensus 315 ----~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~ 355 (367)
+-.+.-+|++.|.++..+.+.||......+++||++.-..+
T Consensus 374 s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~ 418 (447)
T KOG0259|consen 374 SLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEE 418 (447)
T ss_pred hhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChH
Confidence 22356789999999889999999988888999998644433
No 163
>PLN02822 serine palmitoyltransferase
Probab=99.95 E-value=5.5e-25 Score=205.68 Aligned_cols=316 Identities=14% Similarity=0.104 Sum_probs=215.6
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG 84 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g 84 (367)
..++..+++..+-+++.+++.++..... .+...+...++++.|+++++.++ .+++++|++ ++..++.+++++|
T Consensus 117 ~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~-a~~sai~a~~~~g 193 (481)
T PLN02822 117 ANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLS-TIFSVIPAFCKKG 193 (481)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHH-HHHHHHHHhCCCC
Confidence 3344444555555666666666443212 24456889999999999999764 588877665 6788888999999
Q ss_pred CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC-----CCCc-cEEEEEecCCCccccccHHH
Q 017726 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-----AHTI-KAICIVHNETATGVTNNLSK 158 (367)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~-----~~~~-~lv~~~~~~n~tG~~~~~~~ 158 (367)
|.|++....|++. ...+...+.+++.++.+ |.++++..+++.. .+++ ++|+++.+++++|.+.|+++
T Consensus 194 d~Ii~d~~~H~s~--~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~ 266 (481)
T PLN02822 194 DIIVADEGVHWGI--QNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDE 266 (481)
T ss_pred CEEEEeCCccHHH--HHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHH
Confidence 9888765544443 24456678888888766 4555555554311 0234 78999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 159 VRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 159 i~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
|.++|++ ||+++++|++|+++.+. +++....+|+++.|++|.++ +.| |++++++++++.+..... .
T Consensus 267 i~~l~~k--~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~G-G~i~g~~~ii~~~~~~~~-~ 341 (481)
T PLN02822 267 IVRLKEK--YRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TEG-GFCTGSARVVDHQRLSSS-G 341 (481)
T ss_pred HHHHHHH--cCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hCC-eEEEcCHHHHHHHHhcCC-c
Confidence 9999999 99999999999866532 11211257999999999994 666 999999999887663211 1
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCce
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTV 308 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 308 (367)
.++ ..+.+...+.+..++++.+.+. .+++++++++.+++++.|++. |+.+..+ ...++
T Consensus 342 --------------~~f-sa~lPp~~~~Aa~~aL~~l~~~--~~~~~~l~~~~~~l~~~L~~~~g~~~~~~----~~spi 400 (481)
T PLN02822 342 --------------YVF-SASLPPYLASAAITAIDVLEDN--PSVLAKLKENIALLHKGLSDIPGLSIGSN----TLSPI 400 (481)
T ss_pred --------------eee-ccccCHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCcccCCC----CCCCE
Confidence 111 1122333334444577766542 567889999999999999997 8877654 34557
Q ss_pred EEEEcCCCC-----C---HHHHHHHHHhhCCeEEccCCCCC-----CCcEEEEeecCCCCHHHHH
Q 017726 309 TAVIVPSHI-----N---SSEIVRRAWQRYNLSLGLGLNKV-----AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 309 ~~~~~~~~~-----~---~~~l~~~L~~~~gv~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~ 360 (367)
+++.+++.. + ..+++++|.+++||.+.++..+. .+..+|+++....+++|+.
T Consensus 401 ~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~ 465 (481)
T PLN02822 401 VFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDIL 465 (481)
T ss_pred EEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHH
Confidence 777774310 1 25788998866799999753221 1346999876656555443
No 164
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=6.5e-26 Score=206.83 Aligned_cols=287 Identities=16% Similarity=0.068 Sum_probs=194.0
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHh----cCC--CCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeC
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIF----KTT--SGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLI 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~--~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~ 92 (367)
.++.+.+++.+... ...|.......++|+.+++++ |.+ .+++|++|+|+++++..++..+ +.+||.|+++.|
T Consensus 41 ~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p 119 (364)
T PRK07865 41 VPPVIQEALAAAAD-APGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPEL 119 (364)
T ss_pred CCHHHHHHHHHHHh-hCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCC
Confidence 35666777665322 223433344567777787777 432 2346999999999999887776 789999999999
Q ss_pred CcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCC
Q 017726 93 GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHP 169 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~ 169 (367)
.|+.+. ..++..|+++..++ ++++++. +++++|++++|+||||.+++ +++|.++|++ +|
T Consensus 120 ~y~~~~--~~~~~~g~~~~~~~-------~~~~l~~-------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~--~~ 181 (364)
T PRK07865 120 AYPTYE--VGARLAGATVVRAD-------SLTELGP-------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARE--RG 181 (364)
T ss_pred CcccHH--HHHHhcCCEEEecC-------ChhhCCc-------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHH--cC
Confidence 877653 44677899888774 2233221 36799999999999999987 4567778888 99
Q ss_pred cEEEEeeeeccCcee---ec---c----ccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 170 ALFLVDGVSSICAID---FR---M----DEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 170 ~~vi~D~~~~~~~~~---~~---~----~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++||+|++|...... .. . ......+++.|++|.++ .+| +|+++.++++++++.....
T Consensus 182 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~GlRiG~i~~~~~~~~~~~~~~~---------- 250 (364)
T PRK07865 182 AVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSN-LAGYRAGFVAGDPALVAELLEVRK---------- 250 (364)
T ss_pred CEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccC-CCceeeEEEecCHHHHHHHHHHHH----------
Confidence 999999998743221 00 0 01134699999999983 344 6999999998887764210
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
.. .++.+.....++..++.. ..-+++.++.+.++++.+.+.|++.|+.+..+ .++.++++.++ .
T Consensus 251 -----~~---~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~~~~~~~~~--~ 314 (364)
T PRK07865 251 -----HA---GMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAAGFRVDHS----EAGLYLWATRG--E 314 (364)
T ss_pred -----hc---CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC----CccEEEEEeCC--C
Confidence 00 122344333333333332 11256778888999999999999988776655 45556667652 3
Q ss_pred CHHHHHHHHHhhCCeEEccCCCC--CCCcEEEEeecCC
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNK--VAGKVFRIGHLGH 353 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~--~~~~~iRi~~~~~ 353 (367)
+..++.+.|. ++||.+.+|..+ ..++++||++...
T Consensus 315 ~~~~~~~~l~-~~gv~v~pg~~f~~~~~~~iRi~~~~~ 351 (364)
T PRK07865 315 DCWDTVAWLA-ERGILVAPGDFYGPAGAQHVRVALTAT 351 (364)
T ss_pred CHHHHHHHHH-HCCEEEeCccccCcCCCCEEEEEecCC
Confidence 5567888885 459999987532 2356899998654
No 165
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.5e-25 Score=201.75 Aligned_cols=267 Identities=15% Similarity=0.079 Sum_probs=187.9
Q ss_pred HHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHH
Q 017726 45 KTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124 (367)
Q Consensus 45 ~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e 124 (367)
.++++.+++++|.+++++|++++|+++++..+.. ++.+|+ |++..|.|+.+. ..++..|++++.++.+. +
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~--~~~~~~g~~~~~v~~~~------~ 125 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYA--PAFARHGHRVVPLDEAA------D 125 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHH--HHHHHCCCEEEeecccc------h
Confidence 7999999999999865569999999999986654 567776 888888666543 55778899998887642 2
Q ss_pred HHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh-cCCCcEEEEeeeeccCceeec---cccccceEEEecCC
Q 017726 125 VLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICAIDFR---MDEWGIDVALTGSQ 200 (367)
Q Consensus 125 ~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~-~~~~~~vi~D~~~~~~~~~~~---~~~~~~d~~~~s~~ 200 (367)
. +. ..++++++|+||||||.+++.+++.++++. ..+++++|+|++|.......+ ......-+++.|+|
T Consensus 126 ~----~~----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfS 197 (339)
T PRK06959 126 T----LP----AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVG 197 (339)
T ss_pred h----cc----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecCh
Confidence 2 22 245789999999999999998777766542 127899999999875432111 11112358899999
Q ss_pred CcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHH
Q 017726 201 KALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIER 277 (367)
Q Consensus 201 K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~ 277 (367)
|.++ .+| +|++++++++++++..... +++.+.....+..++++ +.. .++.+++
T Consensus 198 K~~g-l~GlRiGy~v~~~~li~~l~~~~~--------------------~~~vs~~~q~a~~~~L~---~~~~~~~~~~~ 253 (339)
T PRK06959 198 KFFG-LAGVRAGFVLAAPALLAALRDALG--------------------AWTVSGPARHAVRAAFA---DAAWQAAMRER 253 (339)
T ss_pred hhcC-CcchheEEEecCHHHHHHHHHhcC--------------------CCCCcHHHHHHHHHHhC---cHHHHHHHHHH
Confidence 9984 444 6999999999988875321 23344433334444443 222 5667888
Q ss_pred HHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH
Q 017726 278 HRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
+.+.++++.+.|+++|+.+.+ .+.+++++.+ +..++.+.|.++ ||.++.. . ...++||++.+..++.
T Consensus 254 ~~~~r~~l~~~L~~~g~~~~~------~~~f~~~~~~---~~~~l~~~l~~~-GI~vr~~-~--~~~~lRisi~~~~~e~ 320 (339)
T PRK06959 254 LAADGARLAALLRAHGFAVHA------TPLFSWTDDP---RAAALHAALARR-GIWTRYF-A--PPPSVRFGLPADEAEW 320 (339)
T ss_pred HHHHHHHHHHHHHHCCCCccC------cceEEEEeCC---CHHHHHHHHHhC-CeEEEEC-C--CCCeEEEECCCCHHHH
Confidence 999999999999999876642 2345667663 567899999755 9999843 2 2358999965666666
Q ss_pred HHHHhhhhc
Q 017726 358 MFNFQLLFQ 366 (367)
Q Consensus 358 ~~~~~~l~~ 366 (367)
+.+.++|++
T Consensus 321 ~~l~~al~~ 329 (339)
T PRK06959 321 QRLEDALAE 329 (339)
T ss_pred HHHHHHHHH
Confidence 666666553
No 166
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=4.6e-25 Score=198.15 Aligned_cols=266 Identities=15% Similarity=0.076 Sum_probs=186.1
Q ss_pred HHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHH
Q 017726 45 KTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124 (367)
Q Consensus 45 ~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e 124 (367)
.++|+.|+++++.+ +|++|+|+++++.+++. +.+||+|++++|.|+.+. ..++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~---~I~it~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~--~~~~~~g~~~~~v~~~-------- 116 (330)
T PRK05664 52 DGLEAAARAYYGAP---QLLPVAGSQAAIQALPR--LRAPGRVGVLSPCYAEHA--HAWRRAGHQVRELDEA-------- 116 (330)
T ss_pred HHHHHHHHHHhCCC---CEEECcCHHHHHHHHHH--ccCCCEEEEcCCChHHHH--HHHHHcCCeEEEechh--------
Confidence 68999999999853 49999999999988753 579999999999877643 5678899999988753
Q ss_pred HHHHHHhccCCCCccEEEEEecCCCccccccHHHH---HHHHHhcCCCcEEEEeeeeccCcee---eccccccceEEEec
Q 017726 125 VLASKLAADTAHTIKAICIVHNETATGVTNNLSKV---RKLLDEYRHPALFLVDGVSSICAID---FRMDEWGIDVALTG 198 (367)
Q Consensus 125 ~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i---~~~~~~~~~~~~vi~D~~~~~~~~~---~~~~~~~~d~~~~s 198 (367)
+++++++ +++++++++|+||||.+++.+++ .++|++ ++++||+|++|...... .........+++.|
T Consensus 117 ~~~~~~~-----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~--~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~S 189 (330)
T PRK05664 117 EVEAALD-----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAA--RGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRS 189 (330)
T ss_pred hHhhhhc-----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHh--cCCEEEEECCcccCCCcccccccccCCCEEEEee
Confidence 4555553 46899999999999999986554 455566 89999999998643211 11111234588999
Q ss_pred CCCccc-CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHH
Q 017726 199 SQKALS-LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (367)
Q Consensus 199 ~~K~~~-g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~ 277 (367)
+||.++ ...++|++++++++++.+..... +++.+.....+...++..... .++.+++
T Consensus 190 fSK~~gl~GlRiG~~v~~~~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~L~~~~~--~~~~~~~ 247 (330)
T PRK05664 190 FGKFFGLAGARLGFVLAEPALLRALAELLG--------------------PWTVSGPTRWLAQAALADTPW--QRRQRER 247 (330)
T ss_pred ccccccCCCcceEEEEeCHHHHHHHHHhcC--------------------CCCCCHHHHHHHHHHHhChHH--HHHHHHH
Confidence 999995 23347999999999888764311 122333333344444432211 4567888
Q ss_pred HHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH
Q 017726 278 HRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
+.++++.+.+.|++.|+..... ...+++++.+ +..++.+.|. ++||.++. +. ..+++||++....++.
T Consensus 248 ~~~~r~~l~~~L~~~~~~~~~~-----~~~f~~~~~~---~~~~~~~~l~-~~gi~v~~-f~--~~~~iRis~~~~~~~~ 315 (330)
T PRK05664 248 LLAASQRLAALLRRHGLTPAGG-----CALFQWVRTE---DAAALHEFLA-RRGILTRL-FE--QPASLRFGLPADEADW 315 (330)
T ss_pred HHHHHHHHHHHHHHCCCcccCC-----cceEEEEecC---CHHHHHHHHH-HCCeEEEE-CC--CCCeEEEECCCCHHHH
Confidence 8889999999999987643221 2235556553 6788988886 45999975 32 3468999966455556
Q ss_pred HHHHhhhhc
Q 017726 358 MFNFQLLFQ 366 (367)
Q Consensus 358 ~~~~~~l~~ 366 (367)
+.+.++|++
T Consensus 316 ~~l~~al~~ 324 (330)
T PRK05664 316 ARLDQALLA 324 (330)
T ss_pred HHHHHHHHH
Confidence 666666654
No 167
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.3e-24 Score=200.95 Aligned_cols=318 Identities=14% Similarity=0.115 Sum_probs=211.9
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
+-+|.|+-....+.+-+.+.+++.+...... .....+...++++.+++++|.+. .++.+||++|+..++..+.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~---~~~~~SG~~An~~ai~~l~ 126 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA---ALLFTSGYVSNWAALSTLG 126 (406)
T ss_pred eecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc---EEEeCCcHHHHHHHHHHhh
Confidence 3345555555554455555555555433211 11223567899999999999632 5666777889998888654
Q ss_pred C--CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHH
Q 017726 82 S--PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV 159 (367)
Q Consensus 82 ~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i 159 (367)
. +|+.|++....|.+.. ......|.++..++.. |++++++.++....+++++|++++++|++|.+.|+++|
T Consensus 127 ~~~~g~~I~~~~~~H~s~~--~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i 199 (406)
T PRK13393 127 SRLPGCVILSDELNHASMI--EGIRHSRAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEI 199 (406)
T ss_pred cCCCCCEEEEccchhHHHH--HHHHHcCCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHH
Confidence 4 6776665555444432 3345567777766643 77888887764321367899999999999999999999
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee-e-----ccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID-F-----RMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~-~-----~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
.++|++ +|+++++|++|+.+.+. . ... ....|+++.+++|.++ ..| |++++++++++.+.....+ +.
T Consensus 200 ~~l~~~--~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~G-G~~~~~~~~~~~l~~~~~~-~~ 274 (406)
T PRK13393 200 CDVAEK--HGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMG-GYITGSAALCDFIRSFASG-FI 274 (406)
T ss_pred HHHHHH--cCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccC-ceeeCCHHHHHHHHHhCcC-ce
Confidence 999999 99999999999854421 0 000 1135888899999995 555 8888999987776532111 00
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAV 311 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 311 (367)
+.++.+...+++..++++.+.+.+ ..+++.+++.+++.+.|++.|+++..+ .++ ++.+
T Consensus 275 ---------------~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~----~~~-i~~v 332 (406)
T PRK13393 275 ---------------FTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN----PSH-IVPV 332 (406)
T ss_pred ---------------ecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC----CCC-eEEE
Confidence 122355555577778888776553 234667889999999999888776643 233 4555
Q ss_pred EcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHHHHH
Q 017726 312 IVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 312 ~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~~~~ 360 (367)
.+++..+..++.++|.+++||.+.++..+. ....+||++...++.+|+.
T Consensus 333 ~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid 384 (406)
T PRK13393 333 MVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIE 384 (406)
T ss_pred EeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHH
Confidence 553323457888989876799998754332 2367999998777766544
No 168
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.5e-25 Score=205.38 Aligned_cols=293 Identities=14% Similarity=0.093 Sum_probs=195.3
Q ss_pred CCcHHHHHHHHHHHHHHHhcC-C----CCceEE--ecCChhHHHHHHHH---ccCCCCCeEEEEeCCcchHHHHHHHHHh
Q 017726 37 SPAVPALTKTLLEDIKKIFKT-T----SGTPFL--IPTTGTGAWESALT---NTLSPGDRIISFLIGQFSLLWIDQQQRL 106 (367)
Q Consensus 37 ~~~~~~~~~~~~~~la~~~~~-~----~~~~v~--~~~ggt~al~~~~~---~~~~~gd~vl~~~~~~~~~~~~~~~~~~ 106 (367)
.|....+..++|+.+++++.- . .+++|+ .|.|+++|+..++. +++++||.|++++|.|+.+. ..++..
T Consensus 67 ~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~--~~~~~~ 144 (404)
T PTZ00376 67 EYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV--NIFKSA 144 (404)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH--HHHHHc
Confidence 455557778999999998632 1 334577 48899999988764 66899999999999877653 568889
Q ss_pred CCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 107 NFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 107 g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
|++++.+++. .++.+|++.+++++.+.. ++++++++++||||||.+++ +++|.++|++ |+++||+|++|...
T Consensus 145 G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~-~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~--~~~~ii~De~Y~~~ 221 (404)
T PTZ00376 145 GLNVKEYRYYDPKTKGLDFDGMLEDLRTAP-NGSVVLLHACAHNPTGVDPTEEQWKEIADVMKR--KNLIPFFDMAYQGF 221 (404)
T ss_pred CCceeeccccCcccCCcCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--CCcEEEEehhhcCc
Confidence 9999999983 347899999999987532 35678888999999999997 4556777888 99999999998643
Q ss_pred ceee---------ccccc-cceEEEecCCCccc-CCCcceee---eeCHHHHHHhccCCCCceeechHHHHHHhhcCCcc
Q 017726 182 AIDF---------RMDEW-GIDVALTGSQKALS-LPTGMGIV---CASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 182 ~~~~---------~~~~~-~~d~~~~s~~K~~~-g~~g~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
...- ..... ...+++.|+||.++ ...++|++ +.++++++++.... .+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~------------~~~~~~~-- 287 (404)
T PTZ00376 222 ASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQL------------KLIIRPM-- 287 (404)
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHH------------HHHHhhh--
Confidence 3210 01111 24588999999996 23446998 46777655443110 0000010
Q ss_pred CCCCcHHHHHHHHHHHHHH---HHh--ChHHHHHHHHHHHHHHHHHHHHcCC----ccccCCCccCCCceEEEEcCCCCC
Q 017726 248 PYTPSIQLLYGLRAALDLI---FEE--GLENVIERHRRLGKATRLAVEAWGL----KNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~---~~~--g~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
...++.....+...++..- .++ .+++.+++++++++.+.+.|++.++ .+..+ .+++++|+++
T Consensus 288 ~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p----~gg~f~~~~~----- 358 (404)
T PTZ00376 288 YSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN----QIGMFSFTGL----- 358 (404)
T ss_pred cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc----CceEEEecCC-----
Confidence 1123333333333334221 111 1455667889999999999998753 23334 4565666654
Q ss_pred HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 319 SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
..+++++|.+++||.+.+| + ||++.+ ..++.+.+.+.|+
T Consensus 359 ~~~~~~~L~~~~~v~v~p~-----~---Ris~~~~~~~~~~~~~~~l~ 398 (404)
T PTZ00376 359 TKEQVERLIEKYHIYLLDN-----G---RISVAGLTSKNVDYVAEAIH 398 (404)
T ss_pred CHHHHHHHHHhCCEeecCC-----C---eEEEeccCHHhHHHHHHHHH
Confidence 2588999998889999887 1 998742 4445555555544
No 169
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.95 E-value=7.4e-25 Score=199.38 Aligned_cols=296 Identities=16% Similarity=0.134 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-CC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~ 119 (367)
....++++.+++++|.+ .+++++|||+|+..++.++ +.+||+|+++.+.|++.. ..+...|++++.++.+. ++
T Consensus 18 ~~~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 18 PKVREFEKAFAEYLGVK---YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA--NAILLLGATPVFVDIDPDTY 92 (352)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--HHHHHcCCeEEEEecCCCcC
Confidence 56789999999999963 3778889999999999887 689999999999888754 44667899999999886 67
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecc-ccccceEEEec
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRM-DEWGIDVALTG 198 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~-~~~~~d~~~~s 198 (367)
.+|+++++++++ +++++|++++ ++|...|+++|.++|++ +|+++++|++|+.+...... .....|+.++|
T Consensus 93 ~~d~~~l~~~i~----~~~~~v~~~~---~~G~~~~~~~i~~l~~~--~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S 163 (352)
T cd00616 93 NIDPELIEAAIT----PRTKAIIPVH---LYGNPADMDAIMAIAKR--HGLPVIEDAAQALGATYKGRKVGTFGDAGAFS 163 (352)
T ss_pred CcCHHHHHHhcC----cCCeEEEEEC---CCCCcCCHHHHHHHHHH--cCCeEEEECCCCCCCeECCEEcccCcceeEEc
Confidence 889999999986 4679998775 69999999999999999 99999999999987654221 01124777777
Q ss_pred CC--CcccCCCcceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQ--KALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~--K~~~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++ |+++++.| |+++.+ +++.+++............. +++... ..++. .+..+.+++......+++++.
T Consensus 164 ~~~~K~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~---~~~~~~aa~~~~~l~~~~~~~ 234 (352)
T cd00616 164 FHPTKNLTTGEG-GAVVTNDEELAERARLLRNHGRDRDRF----KYEHEI-LGYNY---RLSEIQAAIGLAQLEKLDEII 234 (352)
T ss_pred CCCCCCCcccCc-eEEEECCHHHHHHHHHHHHcCCCCCCC----ccccce-eeecc---CcCHHHHHHHHHHHHhhHHHH
Confidence 54 99965554 666665 57766665322111000000 000000 00001 111233344444444577888
Q ss_pred HHHHHHHHHHHHHHHHc-CCccccCCCc-cCCCceEEEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCC----------
Q 017726 276 ERHRRLGKATRLAVEAW-GLKNCTQKEE-WFSDTVTAVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKV---------- 341 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~v~~g~~~~---------- 341 (367)
++.+++++++.+.|++. |+++..+.+. .....++.|.++. +.+..++.+.|.++ ||.+...+.+.
T Consensus 235 ~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~-gI~~~~~~~~~~~~~~~~~~~ 313 (352)
T cd00616 235 ARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEA-GIETRVHYPPLHHQPPYKKLL 313 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHC-CCCeeeecCccccCHhhhhcc
Confidence 88999999999999997 8887764321 2345577788754 56888999999655 99776433221
Q ss_pred -------C------CcEEEEeecCCCCHHHHHH
Q 017726 342 -------A------GKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 342 -------~------~~~iRi~~~~~~~~~~~~~ 361 (367)
+ ...+|++++.+.+++|+..
T Consensus 314 ~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~ 346 (352)
T cd00616 314 GYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDR 346 (352)
T ss_pred CCCcCCChHHHHHHhCeEEccCCCCCCHHHHHH
Confidence 0 1469999888877766543
No 170
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=1.2e-24 Score=198.26 Aligned_cols=312 Identities=16% Similarity=0.102 Sum_probs=221.8
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC--------CCCC---c-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED--------YRSP---A-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~~---~-~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
+.+.++|+-.-+++.+++++.....+ .++| . ...+..-+.++..++||++..+ +=.-||+.|+..+
T Consensus 50 ~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~an--vqp~Sg~~An~~v 127 (493)
T PRK13580 50 SSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAY--VQPHSGADANLVA 127 (493)
T ss_pred cCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCccc--ccCCCcHHHHHHH
Confidence 56778888889999999998874332 1222 2 3455556788889999988754 4556789999999
Q ss_pred HHccCCC-------------------------------CCeEEEEeCCcchHH---HHHHHHHhCCceEEEeCC-CCCCC
Q 017726 77 LTNTLSP-------------------------------GDRIISFLIGQFSLL---WIDQQQRLNFNVDVVESD-WGEGA 121 (367)
Q Consensus 77 ~~~~~~~-------------------------------gd~vl~~~~~~~~~~---~~~~~~~~g~~~~~v~~~-~~~~~ 121 (367)
+.+++.| ||+|+..+..+.++. +..-......+.+..+++ .++.+
T Consensus 128 ~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~i 207 (493)
T PRK13580 128 FWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLL 207 (493)
T ss_pred HHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCcc
Confidence 9998876 799998877554432 110011112444555555 35789
Q ss_pred CHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccc------cccceEE
Q 017726 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD------EWGIDVA 195 (367)
Q Consensus 122 d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~------~~~~d~~ 195 (367)
|++++++.+++ +++.|++++.+|. |...|+++|.++|++ +|+++++|++|++|.+..+.. ..++|++
T Consensus 208 D~d~l~~~~~~----~~plvii~g~S~~-~~~~dl~~i~eia~~--~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~v 280 (493)
T PRK13580 208 DYDEIAALARE----FKPLILVAGYSAY-PRRVNFAKLREIADE--VGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIV 280 (493)
T ss_pred CHHHHHHHHhh----cCCEEEEeCcccc-CCCcCHHHHHHHHHH--cCCEEEEECchhhceeccccchhhcCCCCCCcEE
Confidence 99999999985 5578888888888 557799999999999 999999999999988764431 1268999
Q ss_pred EecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 196 LTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 196 ~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+||++.||.| |++++++++++.+.... ++.+ + ++....+++...++..+.+.+.++.+
T Consensus 281 tgT~hKaL~GP~G-G~I~~~~~l~~~L~~a~--P~i~-----------g-----g~l~p~iAA~avAl~e~~~~ef~~y~ 341 (493)
T PRK13580 281 TTTTHKTLRGPRG-GLVLAKKEYADAVDKGC--PLVL-----------G-----GPLPHVMAAKAVALAEARTPEFQKYA 341 (493)
T ss_pred EeCChhhccCCCe-EEEEecHHHHHHHhhCC--Cccc-----------C-----CCccHHHHHHHHHHHHHhCccHHHHH
Confidence 9999999988887 99999999988874221 1111 2 24444556777777777655456788
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC-CCHHHHHHHHHhhCCeEEccCCCCC------CCcEEEE
Q 017726 276 ERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGLNKV------AGKVFRI 348 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gv~v~~g~~~~------~~~~iRi 348 (367)
++..+|+++|++.|.+.|+.+.... ..++++.+.+.+. .....+.+.|. +.||.+.....|. ....|||
T Consensus 342 ~~l~~Na~~La~~L~~~G~~vv~gg---TdshIV~V~lg~~~~~g~~a~~~L~-e~GI~vn~i~~Ptvp~g~~~~srLRI 417 (493)
T PRK13580 342 QQVVDNARALAEGFLKRGARLVTGG---TDNHLVLIDVTSFGLTGRQAESALL-DAGIVTNRNSIPSDPNGAWYTSGIRL 417 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCccCCC---CCCCEEEEEeCCHHHHHHHHHHHHH-HCCeEEccccCCCCCCCCCCCceEEe
Confidence 9999999999999999999887432 1345777877432 22335556775 5599997543221 2566999
Q ss_pred eecC
Q 017726 349 GHLG 352 (367)
Q Consensus 349 ~~~~ 352 (367)
|+..
T Consensus 418 g~~A 421 (493)
T PRK13580 418 GTPA 421 (493)
T ss_pred ccch
Confidence 9766
No 171
>PRK10534 L-threonine aldolase; Provisional
Probab=99.95 E-value=4.7e-25 Score=198.91 Aligned_cols=294 Identities=13% Similarity=0.067 Sum_probs=190.0
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHH
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLW 99 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~ 99 (367)
+++.+++++.+.......|.......++++.+++++|.++ +++++||++++..++.+++.+||+|+++.+.|.....
T Consensus 12 p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~---~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~ 88 (333)
T PRK10534 12 PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEA---ALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYE 88 (333)
T ss_pred CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCe---EEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhc
Confidence 5567888887754444334344778899999999999866 3577888888888887888999999988775533221
Q ss_pred HHHHHHh-CCceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCccccccHHHH---HHHHHhcCCCcEEE
Q 017726 100 IDQQQRL-NFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKV---RKLLDEYRHPALFL 173 (367)
Q Consensus 100 ~~~~~~~-g~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~~~~i---~~~~~~~~~~~~vi 173 (367)
...+... +++++.++.+.++.+|++++++++.++.. .++++|++|+|+ +|.+.|.++| .++|++ ++++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~--~~~~lv 164 (333)
T PRK10534 89 AGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRE--RNLALH 164 (333)
T ss_pred CCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHH--cCCeEE
Confidence 1112233 36778888777788999999999864200 157999999765 5999986655 567777 899999
Q ss_pred EeeeeccCce---eeccc--cccceEEEecCCCcccCCCcce-eeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCcc
Q 017726 174 VDGVSSICAI---DFRMD--EWGIDVALTGSQKALSLPTGMG-IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 174 ~D~~~~~~~~---~~~~~--~~~~d~~~~s~~K~~~g~~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
+|++|.+... ..... ....|.++.|+||.++.+ +| ++++++++++.+..... ..+.
T Consensus 165 vDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~--------------~~~~-- 226 (333)
T PRK10534 165 VDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRK--------------MTGG-- 226 (333)
T ss_pred eeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHH--------------HhCC--
Confidence 9998765321 11110 112465566899988644 45 68889999887764211 0010
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHH
Q 017726 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAW 327 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 327 (367)
..+... .++.+++..+.+. .+..++..++++++.+.|+++|+++..+ . .+++++++++ .+..++.+.|.
T Consensus 227 --~~~~~~-~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~g~~~~~~----~-~nfv~~~~~~-~~~~~~~~~l~ 295 (333)
T PRK10534 227 --GMRQAG-ILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREAGADVMRQ----D-TNMLFVRVGE-EQAAALGEYMR 295 (333)
T ss_pred --chhhHH-HHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhCCCccCCC----C-ceEEEEECCc-hhHHHHHHHHH
Confidence 011111 1222233333221 2333445567889999999999887665 3 4477788742 34668888776
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecCCCCH
Q 017726 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNE 356 (367)
Q Consensus 328 ~~~gv~v~~g~~~~~~~~iRi~~~~~~~~ 356 (367)
+ .||.++++. ++|++.....+.
T Consensus 296 ~-~gi~v~~~~------~~rl~~~~r~t~ 317 (333)
T PRK10534 296 E-RNVLINASP------IVRLVTHLDVSR 317 (333)
T ss_pred H-cCeeecCCc------eEEEEEEeCCCH
Confidence 5 499998752 478876534443
No 172
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.95 E-value=1.6e-25 Score=207.92 Aligned_cols=294 Identities=12% Similarity=0.022 Sum_probs=185.3
Q ss_pred CcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccCC-----CCCeEEE-EeCCcchHHHHHHHHHh
Q 017726 38 PAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTLS-----PGDRIIS-FLIGQFSLLWIDQQQRL 106 (367)
Q Consensus 38 ~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~~-----~gd~vl~-~~~~~~~~~~~~~~~~~ 106 (367)
|.......++|+.|++++ |.. ++++|++|+|+++++.+++.+++. +||.|++ ..|.|+.+.. .++..
T Consensus 70 Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~--~~~~~ 147 (416)
T PRK09440 70 YDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYAD--AGLEE 147 (416)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHH--Hhhcc
Confidence 333344567888888877 432 335699999999999999988874 6899999 6888777542 22212
Q ss_pred C----CceEEEeCCC---CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEee
Q 017726 107 N----FNVDVVESDW---GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 107 g----~~~~~v~~~~---~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+ .....++.+. .+.+|+++++ +. ++++++++++||||||.+++ +++|.++|++ ++++||+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~--~~~~iI~De 219 (416)
T PRK09440 148 DLFVSYRPNIELLPEGQFKYHVDFEHLH--ID----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQ--HNIPLLIDN 219 (416)
T ss_pred CceeecccccccccccccccCCCHHHcc--cC----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHH--cCCcEEEeC
Confidence 2 2222233332 2568888887 23 46799999999999999998 5567778888 999999999
Q ss_pred eeccCceee---ccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCC
Q 017726 177 VSSICAIDF---RMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (367)
Q Consensus 177 ~~~~~~~~~---~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (367)
+|....... +.. ..+..+++.|+||+.....++|++++++++++++...... ...++
T Consensus 220 ~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~~l~~~~~~~~~~------------------~~~~~ 281 (416)
T PRK09440 220 AYGPPFPGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADEEIIEALSNMNGI------------------ISLAP 281 (416)
T ss_pred CccccCCCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCHHHHHHHHHHHHH------------------hccCC
Confidence 996321111 110 1235688899999632223369999999988877643110 01123
Q ss_pred cHHHHHHHHHHHHHHHHhC-hHH-HHHHHHHHHHHHHHHHHHc--C--CccccCCCccCCCceEEEEcCC-CCCHHHHHH
Q 017726 252 SIQLLYGLRAALDLIFEEG-LEN-VIERHRRLGKATRLAVEAW--G--LKNCTQKEEWFSDTVTAVIVPS-HINSSEIVR 324 (367)
Q Consensus 252 ~~~~~~al~~al~~~~~~g-~~~-~~~~~~~~~~~l~~~L~~~--g--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 324 (367)
+.....++..++..-.-.. ..+ +++.++++++.+.+.|++. + +.+..+ .++.++|+++++ +.+..++.+
T Consensus 282 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p----~gg~fiw~~~~~~~~~~~~~~~ 357 (416)
T PRK09440 282 GRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP----EGAIFLWLWFKDLPITTEELYQ 357 (416)
T ss_pred CcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC----CCceEEEEECCCCCCCHHHHHH
Confidence 4433333333332111000 122 4556677778888888764 3 344444 456788888865 467788999
Q ss_pred HHHhhCCeEEccCCCCCC---------CcEEEEeecCCCCHHHHHHhhh
Q 017726 325 RAWQRYNLSLGLGLNKVA---------GKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 325 ~L~~~~gv~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~l 364 (367)
.|. ++||.+.+|..+.. .+++||++....++.+...+.|
T Consensus 358 ~l~-~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l 405 (416)
T PRK09440 358 RLK-ARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAIL 405 (416)
T ss_pred HHH-HCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHH
Confidence 885 56999999843211 2479999865444433333333
No 173
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=4.3e-25 Score=201.57 Aligned_cols=293 Identities=15% Similarity=0.155 Sum_probs=206.6
Q ss_pred ChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchH
Q 017726 20 IPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~ 97 (367)
..++-.+++.+.... ...++ ....++++.+++++|.+. +++++|||+|+.+++.++ +.+||+|+++.+.|++.
T Consensus 12 ~~~~e~~~~~~~l~~~~~~~g--~~~~~le~~la~~~g~~~---~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 12 MGDEELAAVKEVLRSGWITTG--PKNQALEQAFCQLTGNQH---AIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST 86 (379)
T ss_pred CCHHHHHHHHHHHHcCCccCC--HhHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH
Confidence 344446666553322 22233 567899999999999863 677899999999999988 79999999999987775
Q ss_pred HHHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 98 LWIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 98 ~~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
. ..+...|++++.++.+.+ +.+|+++++++++ +++|+|+. .|++|...|+++|.++|++ +|+++++|+
T Consensus 87 ~--~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~----~~tkav~~---~~~~G~~~d~~~i~~~a~~--~gi~vi~D~ 155 (379)
T PRK11658 87 L--NMIVLLGATPVMVDVDRDTLMVTPEAIEAAIT----PRTKAIIP---VHYAGAPADLDAIRAIGER--YGIPVIEDA 155 (379)
T ss_pred H--HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcc----cCCeEEEE---eCCCCCcCCHHHHHHHHHH--cCCeEEEEC
Confidence 3 446778999999998754 4689999999997 46788874 4569999999999999999 999999999
Q ss_pred eeccCceee--ccccccceEEEecCCCcccCCCcceeeee-CHHHHHHhccCCCCceeechHHHH--------HHhhcCC
Q 017726 177 VSSICAIDF--RMDEWGIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWKDYI--------KFYNLGT 245 (367)
Q Consensus 177 ~~~~~~~~~--~~~~~~~d~~~~s~~K~~~g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 245 (367)
+|+++.... .....+.++++++.+|.+.++.| |+++. ++++.+++......+...+..... ..++.|.
T Consensus 156 a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~ 234 (379)
T PRK11658 156 AHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEG-GLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGY 234 (379)
T ss_pred CCccCCeECCeecCCCCCEEEeCCCCCcCcccCc-eEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecccc
Confidence 999876542 23445668888889999977665 66665 578777776533222221110000 0011121
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCc-cccCCC-ccCCCceEEEEcCC---CCCHH
Q 017726 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK-NCTQKE-EWFSDTVTAVIVPS---HINSS 320 (367)
Q Consensus 246 ~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~~~-~~~~~~~~~~~~~~---~~~~~ 320 (367)
... +..+.+|+...+..+++++.++.+++++.+.+.|++.++. +..+.. ....+.++.++++. +.+.+
T Consensus 235 ----n~~---~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 307 (379)
T PRK11658 235 ----KYN---LADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRD 307 (379)
T ss_pred ----ccC---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHH
Confidence 112 2467888888888889999999999999999999887432 322221 12233455666632 35678
Q ss_pred HHHHHHHhhCCeEEccC
Q 017726 321 EIVRRAWQRYNLSLGLG 337 (367)
Q Consensus 321 ~l~~~L~~~~gv~v~~g 337 (367)
++.+.|.++ ||.++..
T Consensus 308 ~~~~~L~~~-gI~~~~~ 323 (379)
T PRK11658 308 ALMEALKER-GIGTGLH 323 (379)
T ss_pred HHHHHHHHC-CCCCccc
Confidence 999999754 9887643
No 174
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.94 E-value=2.7e-25 Score=206.44 Aligned_cols=275 Identities=16% Similarity=0.078 Sum_probs=177.1
Q ss_pred eEEecCChhHHHHHHHHc-----cCCCCCeEEEEeCCcchHHHHHHHHH--hCCceEEEeCCC--C-----CCCCHHHHH
Q 017726 62 PFLIPTTGTGAWESALTN-----TLSPGDRIISFLIGQFSLLWIDQQQR--LNFNVDVVESDW--G-----EGAKLDVLA 127 (367)
Q Consensus 62 ~v~~~~ggt~al~~~~~~-----~~~~gd~vl~~~~~~~~~~~~~~~~~--~g~~~~~v~~~~--~-----~~~d~e~l~ 127 (367)
+|++|+|+++|+..++.+ ++.|||+|+++.|.|+.+. ..++. .|++++.++.+. + +.+|.++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~--~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYL--EIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHH--HHHHHhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 699999999999998876 7899999999999777654 33343 467777777653 2 778999999
Q ss_pred HHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCcee-eccc--cccceEEEecCCC
Q 017726 128 SKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID-FRMD--EWGIDVALTGSQK 201 (367)
Q Consensus 128 ~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-~~~~--~~~~d~~~~s~~K 201 (367)
++++ +++|+|++++|+||||.+++ +++|.++|++++++++||+|++|+..... .+.. .....+++.|+||
T Consensus 235 ~~~~----~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK 310 (521)
T TIGR03801 235 KLRD----PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSK 310 (521)
T ss_pred HhcC----CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchh
Confidence 8776 57899999999999999998 56677778873349999999998743321 1111 1135689999999
Q ss_pred cccCCCc--ceeeeeCHH-----HHHHh--------ccCCCCceee--------c-hHHHHHHhhcCCccCCCCcHHHH-
Q 017726 202 ALSLPTG--MGIVCASPK-----ALEAS--------KTAKSVRVFF--------D-WKDYIKFYNLGTFWPYTPSIQLL- 256 (367)
Q Consensus 202 ~~~g~~g--~g~~~~~~~-----~~~~~--------~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~- 256 (367)
.++ .+| +|+++++++ +++.+ ... ...... | ............ +.+.+...+.
T Consensus 311 ~fg-~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~r-y~~~~~~p~~~~fidr~vadsr~v~~~~-~~g~s~p~Q~q 387 (521)
T TIGR03801 311 YFG-ATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKR-YSSLTTEPRKLKFIDRLVADSRQVALNH-TAGLSTPQQVQ 387 (521)
T ss_pred hcc-CchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhh-hccccCChhhhhhHHHHHHHHHHHHHhc-cCCCCcHHHHH
Confidence 984 444 699999865 33222 110 000000 1 000001111111 1111222221
Q ss_pred HHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHHHHHcCCcc--ccCCCccCCCceEEEEcCC-C---------------
Q 017726 257 YGLRAALDLIFEE--GLENVIERHRRLGKATRLAVEAWGLKN--CTQKEEWFSDTVTAVIVPS-H--------------- 316 (367)
Q Consensus 257 ~al~~al~~~~~~--g~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~~~~-~--------------- 316 (367)
.++.++...+... -.++.++.++++++.+.+.| |+.+ ..+ .+.++++++++. .
T Consensus 388 ~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~----~g~~Y~~~di~~~~~~~~~~~f~~~l~~~ 460 (521)
T TIGR03801 388 MALFSLFALMDKENAYKAETKDICRRREKLLFRGL---GLPLQEDPN----DVAYYTLIDLEEWAEKNYGEEFSSYLKKN 460 (521)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCC----CeEEEEEeehHHHHHHhcchHHHHHHhcc
Confidence 1322233333221 15667777888888887777 5543 223 466778888752 1
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCC-CcEEEEeecC
Q 017726 317 INSSEIVRRAWQRYNLSLGLGLNKVA-GKVFRIGHLG 352 (367)
Q Consensus 317 ~~~~~l~~~L~~~~gv~v~~g~~~~~-~~~iRi~~~~ 352 (367)
.+..+++.+|.+++||.+.||..+.. ..++|||+.+
T Consensus 461 ~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~ 497 (521)
T TIGR03801 461 YSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLAN 497 (521)
T ss_pred CCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecC
Confidence 15678999999999999999965433 4569999864
No 175
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=3.1e-24 Score=194.42 Aligned_cols=283 Identities=12% Similarity=0.112 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.+.. .+++++||++|+..++.+++++||+|+++++.|.+.. +.......|+++..++..
T Consensus 61 pt~~~Le~~iA~le~~~---~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~--- 134 (394)
T PRK09028 61 PTHFAFQAAIVELEGGA---GTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM--- 134 (394)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC---
Confidence 34668999999998754 3788899999999999999999999999999886654 223456678888877643
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
+.+.++++++ +++|+|++++|+||+|.+.|+++|.++||+ +|+++++|++++.+. .......|+|+++.|.
T Consensus 135 --~~e~l~~~l~----~~TklV~lespsNPtg~v~dl~~I~~la~~--~g~~lvvD~t~a~p~-~~~Pl~~GaDivv~S~ 205 (394)
T PRK09028 135 --IGEGIRELIR----PNTKVLFLESPGSITMEVQDVPTLSRIAHE--HDIVVMLDNTWASPI-NSRPFEMGVDISIQAA 205 (394)
T ss_pred --CHHHHHHhcC----cCceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCccccc-cCCccccCceEEEEeC
Confidence 4678888887 577999999999999999999999999999 999999999998764 3444467899999999
Q ss_pred CCcccCCCcc--eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHH
Q 017726 200 QKALSLPTGM--GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (367)
Q Consensus 200 ~K~~~g~~g~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~ 277 (367)
+||++|+..+ |+++.++++.+++.... . ..|. +++....+.+...++. +.-++++
T Consensus 206 tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-------------~-~~G~----~~~p~~a~l~~rgl~T-----L~lR~~~ 262 (394)
T PRK09028 206 TKYIVGHSDVMLGTATANEKHWDQLREHS-------------Y-LMGQ----CTSPDDVYLAMRGLRT-----LGVRLAQ 262 (394)
T ss_pred CeEecCCCCEEEEEEECCHHHHHHHHHHH-------------H-hcCC----CCCHHHHHHHHcccCc-----HHHHHHH
Confidence 9999987553 76777777655544210 0 1132 2333222222222222 6678889
Q ss_pred HHHHHHHHHHHHHHc-CC-ccccCC----Cc--------cCCCceEEEEcCCC-C-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 278 HRRLGKATRLAVEAW-GL-KNCTQK----EE--------WFSDTVTAVIVPSH-I-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~-g~-~~~~~~----~~--------~~~~~~~~~~~~~~-~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
..+++..+.+.|++. .+ .+.-|. +. ...+.+++|.+..+ . ....|++.|+ -..+.+.-| ..
T Consensus 263 ~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~-l~~~~~slG~~~s 341 (394)
T PRK09028 263 HEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQ-HFKMGFSWGGFES 341 (394)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC-cceEecccCCCcc
Confidence 999999999999987 43 232221 10 12356899998422 1 1234444442 222222222 10
Q ss_pred ----C-------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.||+| .|-++.+|+..++.
T Consensus 342 Lv~~p~~~~~~~~~~~~~~~~~liR~s-vGlEd~~dLi~Dl~ 382 (394)
T PRK09028 342 LILGVFGINKLRTATNWDFSKPLIRLH-IGLEDVDDLIADLE 382 (394)
T ss_pred eeECCCCcCccCchhhhcCCCCeEEEE-eCcCCHHHHHHHHH
Confidence 1 123469998 57777777776653
No 176
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.94 E-value=7.5e-25 Score=201.91 Aligned_cols=307 Identities=12% Similarity=0.043 Sum_probs=200.6
Q ss_pred HHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCC-----CCceE--EecCChhHHHHHHHHcc--CCCCCeEEEE
Q 017726 22 DQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTT-----SGTPF--LIPTTGTGAWESALTNT--LSPGDRIISF 90 (367)
Q Consensus 22 ~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~-----~~~~v--~~~~ggt~al~~~~~~~--~~~gd~vl~~ 90 (367)
+.+.+++.+.... ...|....+..++|+.+++++... .++++ ++|+|+++|+.++++.+ ++|||+|+++
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~ 126 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVS 126 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEEC
Confidence 6778887775432 224555567789999999987321 23445 89999999999988654 5899999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeC--CCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVES--DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~--~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
+|.|+.+. ..++..|++++.+++ +.++.+|++.+++++++.. ++++++++++||||||.+++ +++|.++|++
T Consensus 127 ~P~y~~~~--~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~-~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~ 203 (396)
T PRK09257 127 DPTWPNHR--AIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP-AGDVVLLHGCCHNPTGADLTPEQWDELAELLKE 203 (396)
T ss_pred CCCcccHH--HHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 99887753 567889999999997 2356899999999987532 34567777999999999997 5567788888
Q ss_pred cCCCcEEEEeeeeccCceee-----c---cc-cccceEEEecCCCcccCCCc--ceeeee---CHHHHHHhccCCCCcee
Q 017726 166 YRHPALFLVDGVSSICAIDF-----R---MD-EWGIDVALTGSQKALSLPTG--MGIVCA---SPKALEASKTAKSVRVF 231 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~~-----~---~~-~~~~d~~~~s~~K~~~g~~g--~g~~~~---~~~~~~~~~~~~~~~~~ 231 (367)
++++||+|++|....... . +. .....+++.|+||.++ ++| +|++++ +++.+.++.....
T Consensus 204 --~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~-~~GlRiG~~~~~~~~~~~~~~~~~~~~---- 276 (396)
T PRK09257 204 --RGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFG-LYGERVGALSVVAEDAEEADRVLSQLK---- 276 (396)
T ss_pred --CCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCc-cccccceeEEEEeCCHHHHHHHHHHHH----
Confidence 999999999987543210 0 11 1124688999999995 444 698873 4443333321000
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH-----HhChHHHHHHHHHHHHHHHHHHHHcC----CccccCCCc
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRRLGKATRLAVEAWG----LKNCTQKEE 302 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~ 302 (367)
.... .. .+.++.....++..++..-. +.-+++.+++++++++.+.+.|++.+ +.+..+
T Consensus 277 -------~~~~-~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p--- 343 (396)
T PRK09257 277 -------ATIR-TN--YSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIAR--- 343 (396)
T ss_pred -------HHhh-hh--cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc---
Confidence 0000 00 11233333233333332210 11266788899999999999999974 444444
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
.+++++|+++ + .++++.|.+++||.+.+. + ||++.+ ..+..+...+.|.
T Consensus 344 -~gg~~~w~~l----~-~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~~~~~i~ 393 (396)
T PRK09257 344 -QRGMFSYSGL----T-PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDYVAEAIA 393 (396)
T ss_pred -cceEEEecCC----C-HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHHHHHHHH
Confidence 4666666665 2 356666777889988762 1 999754 3333444444443
No 177
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=198.76 Aligned_cols=324 Identities=17% Similarity=0.160 Sum_probs=221.5
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC--------CC---CCcHHHH-HHHHHHHHHHHhcCCCCceEEe---cCChhHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED--------YR---SPAVPAL-TKTLLEDIKKIFKTTSGTPFLI---PTTGTGAW 73 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~---~~~~~~~-~~~~~~~la~~~~~~~~~~v~~---~~ggt~al 73 (367)
+.+.++|+-..+++.+++++.....+ .+ +..+.+. ..-++++..+.++..... +.+ ..||+.|+
T Consensus 35 ~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~-~~~nv~~~SG~~AN 113 (475)
T PLN03226 35 KGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEK-WGVNVQPLSGSPAN 113 (475)
T ss_pred cCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcce-eEEecCcCchHHHH
Confidence 55678888888999999988875411 11 1222222 333455677888887644 322 37889999
Q ss_pred HHHHHccCCCCCeEEEEeC---CcchHHHHH-HHHHhCC--ceEEEe--CC-CCCCCCHHHHHHHHhccCCCCccEEEEE
Q 017726 74 ESALTNTLSPGDRIISFLI---GQFSLLWID-QQQRLNF--NVDVVE--SD-WGEGAKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 74 ~~~~~~~~~~gd~vl~~~~---~~~~~~~~~-~~~~~g~--~~~~v~--~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
..++.++++|||+|+..+. +|.++.+.. ..+..+. .+..++ .+ +++.+|++++++++.+ .++++|++.
T Consensus 114 ~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~---~~pklIv~~ 190 (475)
T PLN03226 114 FAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAML---FRPKLIIAG 190 (475)
T ss_pred HHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhh---cCCeEEEEe
Confidence 9999999999999998543 444432211 1111111 112222 23 4578999999999875 356776553
Q ss_pred ecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecccc---ccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE---WGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 145 ~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~---~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
.+.+|...|+++|.++|++ +|+++++|++|+.|....+... .++|++++++||||.||.| |+++++++.++.
T Consensus 191 --~S~~s~~~D~a~i~~ia~~--~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~ 265 (475)
T PLN03226 191 --ASAYPRDWDYARMRKIADK--VGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPP 265 (475)
T ss_pred --cCcCCCccCHHHHHHHHHH--cCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhccc
Confidence 2347888899999999999 9999999999998876544321 2689999999999999998 888988876544
Q ss_pred hccCCCCceeechHHHHH--HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccC
Q 017726 222 SKTAKSVRVFFDWKDYIK--FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQ 299 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 299 (367)
+.+. ...+.++..... ++. + +.+++++..++++.++++.+.+.+.++++++..+++++|++.|++.|+.++.+
T Consensus 266 ~~~g--~~~~~d~~~~i~~a~~~-~--~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~ 340 (475)
T PLN03226 266 KGQG--EGAVYDYEDKINFAVFP-G--LQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTG 340 (475)
T ss_pred ccCC--CccHHHHHHHhccccCC-c--cCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcC
Confidence 3221 111111111110 110 1 12357788899999999999988888899999999999999999999999875
Q ss_pred CCccCCCceEEEEc-CCCCCHHHHHHHHHhhCCeEEccCC-----CCCCCcEEEEee
Q 017726 300 KEEWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGL-----NKVAGKVFRIGH 350 (367)
Q Consensus 300 ~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gv~v~~g~-----~~~~~~~iRi~~ 350 (367)
.. .+.++.+.+ +.+++..++.+.|. +.||.+..+. .+..++.+|+|.
T Consensus 341 ~t---~~hi~lv~~~~~gi~~~~~~~~L~-~~~I~~nk~~~p~~~~~~~~~giRiGt 393 (475)
T PLN03226 341 GT---DNHLVLWDLRPLGLTGSRVEKVLD-LAHITLNKNAVPGDSSALVPGGVRIGT 393 (475)
T ss_pred CC---CCCEEEEEccCCCCCHHHHHHHHH-HCCCEECCCCCCCCcccCCCCCcccCc
Confidence 32 134566666 45778888888885 5699987653 123445699865
No 178
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.94 E-value=5e-24 Score=189.76 Aligned_cols=318 Identities=19% Similarity=0.180 Sum_probs=243.2
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
.-+|.|+-....+.+-+++.+++.++..... -.+..+...++++.+|+++|.+. .++| +||-.|+..++.+++
T Consensus 44 f~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f-~SGy~AN~~~i~~l~ 120 (388)
T COG0156 44 FCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA--ALLF-SSGFVANLGLLSALL 120 (388)
T ss_pred eeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc--EEEE-cccchhHHHHHHHhc
Confidence 3467788777777788888999998755422 23456888999999999999887 4555 778999999999999
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCC--CccEEEEEecCCCccccccHHHH
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLSKV 159 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~--~~~lv~~~~~~n~tG~~~~~~~i 159 (367)
.++|.|+.-...|.|. ...++..+++++....+ |+++||+.+.+.... +.++|+....-+..|.+.|+++|
T Consensus 121 ~~~dli~~D~lnHASi--idG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l 193 (388)
T COG0156 121 KKGDLIFSDELNHASI--IDGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPEL 193 (388)
T ss_pred CCCcEEEEechhhhhH--HHHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHH
Confidence 9998888777766663 36677888998888764 899999999873111 46888999999999999999999
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCce
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 230 (367)
.+++++ |++++++|++|+.|.+- +.+....+||++++++|.++ ..| |++.++..+++.+... .+.+
T Consensus 194 ~~L~~k--y~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~G-g~v~g~~~~~d~L~~~-ar~~ 268 (388)
T COG0156 194 VELAEK--YGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSG-GYIAGSAALIDYLRNR-ARPF 268 (388)
T ss_pred HHHHHH--hCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccC-ceeeCcHHHHHHHHHh-CCce
Confidence 999999 99999999999987653 11222245899999999995 665 9999999998887643 2222
Q ss_pred eechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEE
Q 017726 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 310 (367)
.+ ..+.++...++...+++.+.+. ...+++.+++..++++.+...|+.+.+. ...++.
T Consensus 269 if---------------StalpP~~aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~~s-----~s~I~p 326 (388)
T COG0156 269 IF---------------STALPPAVAAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLLPS-----ESPIIP 326 (388)
T ss_pred ec---------------cCCCCHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccCCC-----CCCeee
Confidence 22 2246666667888899988865 5678899999999997777778777553 334666
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCC---CcEEEEeecCCCCHHHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVA---GKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~ 361 (367)
+.+.+.....++.+.|+++ ||.+.+...|.- ...+|+++...++++|+..
T Consensus 327 v~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~ 379 (388)
T COG0156 327 VILGDEERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDR 379 (388)
T ss_pred eEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHH
Confidence 6665545577888999877 999987766543 3569999988887766554
No 179
>PLN02590 probable tyrosine decarboxylase
Probab=99.94 E-value=7e-25 Score=204.47 Aligned_cols=343 Identities=15% Similarity=0.076 Sum_probs=233.8
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCC------ceEEecCChhHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG------TPFLIPTTGTGAWESA 76 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~------~~v~~~~ggt~al~~~ 76 (367)
++.+.+.|++...+.-+-+.+....+. ..+|....+..++.+++++++|.++. ..-++++|||+|+..+
T Consensus 131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence 467788888887777777766665442 22566778889999999999999863 3368899999999876
Q ss_pred HHccCC-----------CCCeEEEEeCCcchHHHHHHHHHhCC---ceEEEeCCC--CCCCCHHHHHHHHhccC--CCCc
Q 017726 77 LTNTLS-----------PGDRIISFLIGQFSLLWIDQQQRLNF---NVDVVESDW--GEGAKLDVLASKLAADT--AHTI 138 (367)
Q Consensus 77 ~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~e~l~~~i~~~~--~~~~ 138 (367)
+.+... +.-.|++++..|+| +.+++..+|+ +++.||++. ++++|+++|+++|++.. ...|
T Consensus 211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S--v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P 288 (539)
T PLN02590 211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSS--FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIP 288 (539)
T ss_pred HHHHHHHHHhhhcccCCCCEEEEecCCchHH--HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 643211 11133344555665 4577888887 588999884 46899999999997632 1346
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecc------ccccceEEEecCCCcccCCCcceee
Q 017726 139 KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRM------DEWGIDVALTGSQKALSLPTGMGIV 212 (367)
Q Consensus 139 ~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~------~~~~~d~~~~s~~K~~~g~~g~g~~ 212 (367)
-+|+.+...+.+|.+.|+++|.++|++ +|+|++||+|++......+- .-..+|.++.++|||+..|.++|++
T Consensus 289 ~~VvaTaGTT~tGaiDpl~~Ia~i~~~--~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~l 366 (539)
T PLN02590 289 FFICATVGTTSSAAVDPLVPLGNIAKK--YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPL 366 (539)
T ss_pred EEEEEEeCCCCCcccCCHHHHHHHHHH--hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEE
Confidence 788999999999999999999999999 99999999999876543221 1125799999999999999999999
Q ss_pred eeCHHH--HHHhccCCCCceeechHH--HHHHhhcCCc-cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Q 017726 213 CASPKA--LEASKTAKSVRVFFDWKD--YIKFYNLGTF-WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRL 287 (367)
Q Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~ 287 (367)
+++... .+.+.. ...|+.... ....+....+ ...+.. ...+.++.+++.+..+|+++++++..++++++.+
T Consensus 367 lvr~~~~l~~a~~~---~~~YL~~~~~~~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~ 442 (539)
T PLN02590 367 WVKDRYSLIDALKT---NPEYLEFKVSKKDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFED 442 (539)
T ss_pred EecCHHHHHHHhhc---CHHHhCCcccccccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988653 221211 111110000 0000000000 011122 3447888899999999999999999999999999
Q ss_pred HHHHc-CCccccCCCccCCCceEEEEcCC-CCC-------HHHHHHHHHhhCCeEEccCCCCCCC-cEEEEeecCCCCHH
Q 017726 288 AVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HIN-------SSEIVRRAWQRYNLSLGLGLNKVAG-KVFRIGHLGHLNEV 357 (367)
Q Consensus 288 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~l~~~L~~~~gv~v~~g~~~~~~-~~iRi~~~~~~~~~ 357 (367)
.|++. +++++.+ ....+++|+... +.+ ..++.++|.+.-.+++.+.. ..+ .++|+++.+..+.+
T Consensus 443 ~l~~~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~--~~g~~~lR~~i~n~~T~~ 516 (539)
T PLN02590 443 YVAQDPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTA--LSGKFVLRFAVGAPLTEE 516 (539)
T ss_pred HHhcCCCeEEecC----CceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeE--ECCEEEEEEEecCCCCCH
Confidence 99997 7998886 345678888732 212 13566777655334443322 223 45999988876654
Q ss_pred HHHHhhh
Q 017726 358 MFNFQLL 364 (367)
Q Consensus 358 ~~~~~~l 364 (367)
+-...++
T Consensus 517 ~dv~~~~ 523 (539)
T PLN02590 517 KHVTEAW 523 (539)
T ss_pred HHHHHHH
Confidence 4433343
No 180
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=1e-24 Score=199.37 Aligned_cols=283 Identities=14% Similarity=0.098 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.+++++|.+. .++++||+.|+..++.+++.+||+|+++.+.|.+.. +...++..|+++..++.
T Consensus 61 pt~~~Le~~lA~l~G~~~---al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~---- 133 (386)
T PRK06767 61 PTVKLFEERMAVLEGGEE---ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM---- 133 (386)
T ss_pred cchHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC----
Confidence 457899999999999653 455678889999988888999999999988766543 33334556776666654
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|++++++++. +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|+
T Consensus 134 -~d~~~l~~~i~----~~tklV~lesp~NptG~v~dl~~I~~la~~--~g~~vivD~a~a~~~~~~pl-~~g~Div~~S~ 205 (386)
T PRK06767 134 -ETEADIENKIR----PNTKLIFVETPINPTMKLIDLKQVIRVAKR--NGLLVIVDNTFCSPYLQRPL-ELGCDAVVHSA 205 (386)
T ss_pred -CCHHHHHHhhC----cCceEEEEeCCCCCCceecCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hcCCcEEEecC
Confidence 27899999987 467999999999999999999999999999 99999999998755433333 35789999999
Q ss_pred CCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~ 277 (367)
+|+++|+.. .|+++++++.++++.... +...|. ..+....+.+..+++ -+..+.++
T Consensus 206 sK~l~g~g~~~gG~v~~~~~~i~~~~~~~-------------~~~~g~----~~~~~~a~l~~~~L~-----tl~~r~~~ 263 (386)
T PRK06767 206 TKYIGGHGDVVAGVTICKTRALAEKIRPM-------------RKDIGG----IMAPFDAWLLLRGLK-----TLAVRMDR 263 (386)
T ss_pred cceecCCCCceeEEEEeChHHHHHHHHHH-------------HHHhCC----CCCHHHHHHHHcCCC-----cHHHHHHH
Confidence 999976543 489999998876653210 001121 122221111111111 25567788
Q ss_pred HHHHHHHHHHHHHHc-CCcccc-CCCc------cCCCceEEEEcCCC-CCHHHHHHHHHhhCCeEEccCC-C-----C--
Q 017726 278 HRRLGKATRLAVEAW-GLKNCT-QKEE------WFSDTVTAVIVPSH-INSSEIVRRAWQRYNLSLGLGL-N-----K-- 340 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~-g~~~~~-~~~~------~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gv~v~~g~-~-----~-- 340 (367)
..+++..+.+.|++. ++..+. |+.+ ...+.++.|.+..+ .+..+|++.|+ ..++.+.-|- . +
T Consensus 264 ~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~-~~~~~~s~G~~~sl~~~p~~ 342 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLH-FITIAVSLGDTETLIQHPAT 342 (386)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCC-ccEEecCCCCcCccccCCCc
Confidence 899999999999997 766322 2111 12345888888422 24567888884 5566665441 1 1
Q ss_pred ---------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 341 ---------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 341 ---------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
...+.+|+| .|-++.+|+..++
T Consensus 343 ~~~~~~~~~~~~~~gi~~~l~R~s-vGlE~~~dl~~dl 379 (386)
T PRK06767 343 MTHAAIPAELRQEMGIYDNLIRLS-VGLESWEDIVSDL 379 (386)
T ss_pred cccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHH
Confidence 012469998 5777777776654
No 181
>PRK08354 putative aminotransferase; Provisional
Probab=99.94 E-value=3.9e-24 Score=190.64 Aligned_cols=281 Identities=14% Similarity=0.028 Sum_probs=176.3
Q ss_pred hHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHH
Q 017726 21 PDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWI 100 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~ 100 (367)
|+.+.+++.+.......|. ....+++.++++++. +|++|+|+++++..++.. +.+||.|+++.|.|+.+.
T Consensus 22 p~~~~~a~~~~~~~~~~yp---~~~~l~~~ia~~~~~----~I~vt~G~~~al~~~~~~-~~~gd~vlv~~P~y~~~~-- 91 (311)
T PRK08354 22 PEWLDEMFERAKEISGRYT---YYEWLEEEFSKLFGE----PIVITAGITEALYLIGIL-ALRDRKVIIPRHTYGEYE-- 91 (311)
T ss_pred CHHHHHHHHHHHHHhhcCC---ChHHHHHHHHHHHCC----CEEECCCHHHHHHHHHHh-hCCCCeEEEeCCCcHHHH--
Confidence 4566777765322211222 135789999999982 499999999999887754 458999999999777643
Q ss_pred HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH---HHHHHHHhcCCCcEEEEeee
Q 017726 101 DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS---KVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 101 ~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~---~i~~~~~~~~~~~~vi~D~~ 177 (367)
..++..|.+++.++ +|++.+++.++ +++++++++|+||||.+++.+ +|.++|++ +|+++|+|++
T Consensus 92 ~~~~~~g~~~~~~~------~d~~~l~~~~~-----~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~--~~~~li~De~ 158 (311)
T PRK08354 92 RVARFFAARIIKGP------NDPEKLEELVE-----RNSVVFFCNPNNPDGKFYNFKELKPLLDAVED--RNALLILDEA 158 (311)
T ss_pred HHHHHcCCEEeecC------CCHHHHHHhhc-----CCCEEEEecCCCCCCCccCHHHHHHHHHHhhh--cCcEEEEeCc
Confidence 56778899887653 57888888775 357899999999999999754 55666677 9999999999
Q ss_pred eccCceeeccccccceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHH
Q 017726 178 SSICAIDFRMDEWGIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQL 255 (367)
Q Consensus 178 ~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (367)
|......-........+++.|++|.++ .+| +|++++ ..+.+..... +++.+..+
T Consensus 159 y~~f~~~~~~~~~~~vi~~~S~SK~~~-l~GlRiG~~v~---~~~~l~~~~~--------------------~~~~~~~~ 214 (311)
T PRK08354 159 FIDFVKKPESPEGENIIKLRTFTKSYG-LPGIRVGYVKG---FEEAFRSVRM--------------------PWSIGSTG 214 (311)
T ss_pred chhccccccccCCCcEEEEeccHhhcC-Cccceeeeeee---hHHHHHHcCC--------------------CccCCHHH
Confidence 965432211111245688999999995 444 699988 3333332210 22233322
Q ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 017726 256 LYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (367)
Q Consensus 256 ~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v 334 (367)
..++.+ +.+.+.+ +..++.+.+++..+.+ +.....+ .++ ++++.++ +..++.+.|. ++||.+
T Consensus 215 ~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~----~~~-~~~~~~~---~~~~~~~~l~-~~gv~v 277 (311)
T PRK08354 215 YAFLEF----LIEDDFE----HLRKTMPLIWREKERFEKALYVKS----DAN-FFIKDVG---DAEKFVEFLK-RNGILV 277 (311)
T ss_pred HHHHHH----HHHhHHH----HHHHHHHHHHHHHHHHHHhcCCCC----CCc-EEEEECC---CHHHHHHHHH-HCCeEE
Confidence 222222 2221122 2223333333333333 2222222 344 4445543 5678999886 459999
Q ss_pred ccCCCCCCCcEEEEeecCCCCHHHHHHhhhhc
Q 017726 335 GLGLNKVAGKVFRIGHLGHLNEVMFNFQLLFQ 366 (367)
Q Consensus 335 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~~ 366 (367)
++|..+..++++||++. ..++.+.+..+|++
T Consensus 278 ~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~ 308 (311)
T PRK08354 278 RDCTSFGLPGYIRFSVR-DREENEKLIRALRE 308 (311)
T ss_pred EecccCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 99865544578999964 44445555555553
No 182
>PLN02271 serine hydroxymethyltransferase
Probab=99.94 E-value=5.1e-24 Score=194.75 Aligned_cols=330 Identities=15% Similarity=0.093 Sum_probs=227.5
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC--------CCCC---cH-HHHHHHHHHHHHHHhcCCCCce-E-EecCChhHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED--------YRSP---AV-PALTKTLLEDIKKIFKTTSGTP-F-LIPTTGTGAWE 74 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~~---~~-~~~~~~~~~~la~~~~~~~~~~-v-~~~~ggt~al~ 74 (367)
+.+.++|+---+++.|++++-....+ .++| .+ .++..-+.++..++||++.+++ + +-.-||+.|+.
T Consensus 149 ~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~ 228 (586)
T PLN02271 149 KGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANF 228 (586)
T ss_pred cCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHH
Confidence 56778888889999999998875332 1122 22 3444556788888999875221 1 33348899999
Q ss_pred HHHHccCCCCCeEEEEeCCcchHHHH-------HHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhccCCCCccEEEEE
Q 017726 75 SALTNTLSPGDRIISFLIGQFSLLWI-------DQQQRLNFNVDVVE--SD-WGEGAKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~~~-------~~~~~~g~~~~~v~--~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
.++.++++|||+|+..+.++.++... ..+...|..+..++ .+ +++.+|.+++++...+ .+||+|++.
T Consensus 229 aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~---~rPKLII~g 305 (586)
T PLN02271 229 AVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD---FRPKILICG 305 (586)
T ss_pred HHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh---cCCeEEEEC
Confidence 99999999999999998877766421 12244566666666 43 4578999999995543 688999998
Q ss_pred ecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccc---cccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 145 ~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~---~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
+..+| ...|+++++++|++ +|+++++|++|..|.++.+.. -.++|++++++||||.||.| |+++.+++....
T Consensus 306 ~Sayp--r~~D~~~i~eIAde--vGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~ 380 (586)
T PLN02271 306 GSSYP--REWDYARFRQIADK--CGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLR 380 (586)
T ss_pred chhcc--CcCCHHHHHHHHHH--cCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEeccccccc
Confidence 87777 67899999999999 999999999999988755421 22689999999999999999 888887664322
Q ss_pred hccCCCCceeec--hHHHHHHhhcCCc--cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccc
Q 017726 222 SKTAKSVRVFFD--WKDYIKFYNLGTF--WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNC 297 (367)
Q Consensus 222 ~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~ 297 (367)
+.... .++..+ ..+..++.+...+ ....+....++++..+++.......++..++..+|++.|.+.|.+.|++++
T Consensus 381 ~~g~~-gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv 459 (586)
T PLN02271 381 KQGML-LSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLV 459 (586)
T ss_pred ccCCc-cccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEe
Confidence 22111 111111 1111111111100 011233444789999999887666688889999999999999999999998
Q ss_pred cCCCccCCCceEEEEcC-CCCCHHHHHHHHHhhCCeEEcc----CC-CCCCCcEEEEeec
Q 017726 298 TQKEEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLGL----GL-NKVAGKVFRIGHL 351 (367)
Q Consensus 298 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~v~~----g~-~~~~~~~iRi~~~ 351 (367)
+.. ..++++++++. .+++.....+.| ++.||.+.- +. .+..++.+|||..
T Consensus 460 ~gg---TdnHlvLvDl~~~g~~G~~ae~~L-e~~~I~~Nkn~iP~d~~~~~psGiRiGT~ 515 (586)
T PLN02271 460 TGG---TDNHLLLWDLTTLGLTGKNYEKVC-EMCHITLNKTAIFGDNGTISPGGVRIGTP 515 (586)
T ss_pred eCC---CCcceeeecCcccCCCHHHHHHHH-HHcCeEeccccCCCCCCCCCCCcccccCH
Confidence 853 34556777772 355666665555 677998852 22 1233456999873
No 183
>PLN02368 alanine transaminase
Probab=99.94 E-value=5.7e-25 Score=201.30 Aligned_cols=250 Identities=12% Similarity=0.039 Sum_probs=177.7
Q ss_pred CCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccC-CCCCeEEEEeCCcchHHHHHHHHHhCCce
Q 017726 37 SPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL-SPGDRIISFLIGQFSLLWIDQQQRLNFNV 110 (367)
Q Consensus 37 ~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~-~~gd~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (367)
.|.......++|+.+++++ |.+ .+++|++|+|+++++..++.+++ ++||.|++++|.|+.+. ..++..|.++
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--~~~~~~g~~~ 179 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--ATISLLGGTL 179 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--HHHHHcCCEE
Confidence 3444455668888888877 543 34569999999999999998887 79999999999887754 5577889999
Q ss_pred EEEeCCCC--CCCCHHHHHHHHhccC--CCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCce
Q 017726 111 DVVESDWG--EGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI 183 (367)
Q Consensus 111 ~~v~~~~~--~~~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~ 183 (367)
+.++++.+ +.+|++++++++++.. ..++|++++++|+||||.+++ +++|.++|++ +|++||+|++|.....
T Consensus 180 v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~--~~~~II~DE~Y~~l~y 257 (407)
T PLN02368 180 VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQ--ERLVLLGDEVYQQNIY 257 (407)
T ss_pred EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHH--cCCEEEEEcccccccc
Confidence 99998653 6889999999987411 026899999999999999997 5567778888 9999999999865432
Q ss_pred ----ee-cc-------c----cccceEEEecCCCcccCCCc--ceeeee---CHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 184 ----DF-RM-------D----EWGIDVALTGSQKALSLPTG--MGIVCA---SPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 184 ----~~-~~-------~----~~~~d~~~~s~~K~~~g~~g--~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
++ +. . ..+..+++.|+||.+.+.+| +|++++ ++++++.+.....
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~--------------- 322 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS--------------- 322 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc---------------
Confidence 11 10 0 11246888999999853444 699984 8888877764310
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHH-------H--HhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEE
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLI-------F--EEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~-------~--~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 312 (367)
. .++++.....++.+++..- . ...++++.+.++++++.+.+.|+++ |+.+..| .+++++|.+
T Consensus 323 -~---~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P----~Gafy~~~~ 394 (407)
T PLN02368 323 -I---ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT----EGAMYSFPQ 394 (407)
T ss_pred -c---cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC----CeeeEeccC
Confidence 0 1234443334444444310 0 0113456788899999999999998 8888777 466666655
Q ss_pred c
Q 017726 313 V 313 (367)
Q Consensus 313 ~ 313 (367)
+
T Consensus 395 i 395 (407)
T PLN02368 395 I 395 (407)
T ss_pred C
Confidence 5
No 184
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=3.6e-24 Score=197.33 Aligned_cols=325 Identities=14% Similarity=0.101 Sum_probs=211.6
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCCCC-----c---HHHHHHHHHH----HHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRSP-----A---VPALTKTLLE----DIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~~-----~---~~~~~~~~~~----~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
+.+++.|+-..+++.+++++......+++. . -.+...++++ .+++++|.+. .+++++||+.|+..+
T Consensus 29 ~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~ 106 (416)
T PRK13034 29 DHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAV 106 (416)
T ss_pred cCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHH
Confidence 445566666667999999998874222211 0 0245666666 9999999875 346678999999999
Q ss_pred HHccCCCCCeEEEEeCCcchHHHHHHHH--HhCCce--EEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 77 LTNTLSPGDRIISFLIGQFSLLWIDQQQ--RLNFNV--DVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~--~~g~~~--~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
+.+++.+||+|++....|.+.... .++ ..+..+ ..++.+. .+.+|+++++++++. .++|+|+++++ .+|
T Consensus 107 l~al~~~GD~Vl~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~klVi~~~~--~~g 180 (416)
T PRK13034 107 YLALLKPGDTILGMSLSHGGHLTH-GAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKE---HKPKLIIAGFS--AYP 180 (416)
T ss_pred HHHhcCCCCEEEEcCccceeeeec-CCcceeccceeeeEEcccccccCCcCHHHHHHHHhh---cCCeEEEECCC--ccc
Confidence 999999999999998877763211 111 112222 2333332 356899999999864 35688877553 367
Q ss_pred ccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccc---cccceEEEecCCCcccCCCcceeeeeCHHH-HHHhccCCC
Q 017726 152 VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAKS 227 (367)
Q Consensus 152 ~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~---~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~-~~~~~~~~~ 227 (367)
...|+++|.++|++ +|+++++|++|++|....+.. ..++|++++|+||+++|+.| |+++++++. .+++.....
T Consensus 181 ~~~dl~~l~~la~~--~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~~ 257 (416)
T PRK13034 181 RELDFARFREIADE--VGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAVF 257 (416)
T ss_pred cccCHHHHHHHHHH--cCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhcC
Confidence 88899999999999 999999999998876543211 12589999999999988887 766665544 444433211
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCc
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDT 307 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 307 (367)
. + + ...+....++++..++....+.+..+.+++..+++++|++.|++.|+++..+. ....
T Consensus 258 ~---------------~-~-~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~---~~t~ 317 (416)
T PRK13034 258 P---------------G-L-QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDLVSGG---TDNH 317 (416)
T ss_pred C---------------c-c-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEeccCC---CCCc
Confidence 1 1 0 01122333344444444443333456688999999999999999998886531 1233
Q ss_pred eEEEEcCC-CCCHHHHHHHHHhhCCeEEccC------CCCCCCcEEEEeecC----CC--CHHHHHHhhhh
Q 017726 308 VTAVIVPS-HINSSEIVRRAWQRYNLSLGLG------LNKVAGKVFRIGHLG----HL--NEVMFNFQLLF 365 (367)
Q Consensus 308 ~~~~~~~~-~~~~~~l~~~L~~~~gv~v~~g------~~~~~~~~iRi~~~~----~~--~~~~~~~~~l~ 365 (367)
++.+.+.+ +.+...+.++|. +.||.+..- ..+..+..+|+|++. .. ++.+....+|.
T Consensus 318 i~~v~~~~~~~~~~~~~~~L~-~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 318 LLLVDLRPKGLSGKDAEQALE-RAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred EEEEEcCCCCCCHHHHHHHHH-hCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 55565533 445666778885 559998741 112234569999766 33 34455555544
No 185
>PLN02880 tyrosine decarboxylase
Probab=99.94 E-value=8.1e-25 Score=204.17 Aligned_cols=331 Identities=15% Similarity=0.100 Sum_probs=227.6
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCC------ceEEecCChhHHHHHH
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG------TPFLIPTTGTGAWESA 76 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~------~~v~~~~ggt~al~~~ 76 (367)
++.+.+.|++...+..+.+.+....+. ..+|.......++.+++++++|.++. ...++|+|||+|+..+
T Consensus 83 P~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~a 162 (490)
T PLN02880 83 PNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVV 162 (490)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHH
Confidence 466777888776666666655554332 12466678888999999999999864 2368899999998876
Q ss_pred HHccCC----------CCC-eEEEEeCCcchHHHHHHHHHhCCc---eEEEeCCC--CCCCCHHHHHHHHhccC--CCCc
Q 017726 77 LTNTLS----------PGD-RIISFLIGQFSLLWIDQQQRLNFN---VDVVESDW--GEGAKLDVLASKLAADT--AHTI 138 (367)
Q Consensus 77 ~~~~~~----------~gd-~vl~~~~~~~~~~~~~~~~~~g~~---~~~v~~~~--~~~~d~e~l~~~i~~~~--~~~~ 138 (367)
+.+..+ ... .|+++...|+| +.+++..+|+. ++.||++. ++++|+++|+++|++.. ...|
T Consensus 163 l~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S--v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p 240 (490)
T PLN02880 163 LLAARDRVLRKVGKNALEKLVVYASDQTHSA--LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIP 240 (490)
T ss_pred HHHHHHHHHHHhcccccCCeEEEEcCCchHH--HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCcc
Confidence 643210 122 34445556666 45778888884 78899875 56899999999997631 1346
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee-----cccc-ccceEEEecCCCcccCCCcceee
Q 017726 139 KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-----RMDE-WGIDVALTGSQKALSLPTGMGIV 212 (367)
Q Consensus 139 ~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-----~~~~-~~~d~~~~s~~K~~~g~~g~g~~ 212 (367)
-+|+.+...+.+|.+.|+++|.++|++ +|+|++||++++.+.+.. .+.. .++|+++.++|||+..|.++|++
T Consensus 241 ~~vvataGTT~~GaiDpl~eI~~i~~~--~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~l 318 (490)
T PLN02880 241 FFLCATVGTTSSTAVDPLLELGKIAKS--NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLL 318 (490)
T ss_pred EEEEEecCCCcCcccCcHHHHHHHHHH--cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEE
Confidence 788999999999999999999999999 999999999998765433 1222 36899999999999999999999
Q ss_pred eeCHHHHHHhccCCCCceee-----------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Q 017726 213 CASPKALEASKTAKSVRVFF-----------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRL 281 (367)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~ 281 (367)
++++... ..........|+ ++.++. ++.++ . ...+.++.+++.+..+|+.++.++..++
T Consensus 319 lvr~~~~-l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~--i~~~r------r-~~alklw~~l~~~G~~g~~~~i~~~~~l 388 (490)
T PLN02880 319 WVKDRNA-LIQSLSTNPEFLKNKASQANSVVDYKDWQ--IPLGR------R-FRSLKLWMVLRLYGVENLQSYIRNHIKL 388 (490)
T ss_pred EEeCHHH-HHHHHccCHHHhcCccccccCCCChhccC--cCCCC------c-ccHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9885331 111111111111 100000 11111 1 1124666677777778888888888899
Q ss_pred HHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-CCCH-------HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 282 GKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS-HINS-------SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 282 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
++++.+.|++. +++++.+ ....+++|+++. ..+. .++.++|.+...+.+..... ....++|+++..
T Consensus 389 A~~~~~~l~~~~~~el~~~----~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~-~g~~~lR~~~~n 463 (490)
T PLN02880 389 AKEFEQLVAQDSRFEVVTP----RIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVL-SGKYVLRFAVGA 463 (490)
T ss_pred HHHHHHHHhcCCCEEEecC----CceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEE-CCEEEEEEEecC
Confidence 99999999987 8888886 234578888842 2221 35677776666666654322 123469999988
Q ss_pred CCCHH
Q 017726 353 HLNEV 357 (367)
Q Consensus 353 ~~~~~ 357 (367)
..+..
T Consensus 464 ~~tt~ 468 (490)
T PLN02880 464 PLTEE 468 (490)
T ss_pred CCCCH
Confidence 77653
No 186
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=3.4e-24 Score=196.21 Aligned_cols=283 Identities=14% Similarity=0.093 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.+++++|.+.. +++++|+.++..++.+++.+||+|+++++.|.+.. +...++..|+++..++
T Consensus 65 p~~~~Le~~lA~l~G~~~~---~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd----- 136 (398)
T PRK07504 65 PTVDMFEKRMCALEGAEDA---RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD----- 136 (398)
T ss_pred chHHHHHHHHHHHhCCCee---eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-----
Confidence 5578999999999998762 34678899998888778899999999998777654 3345567799888885
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
..|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|++++|+
T Consensus 137 ~~d~e~l~~ai~----~~tklV~lesp~NptG~v~dl~~I~~la~~--~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~ 209 (398)
T PRK07504 137 GLDLDNWEKAVR----PNTKVFFLESPTNPTLEVIDIAAVAKIANQ--AGAKLVVDNVFATPLFQ-KPLELGAHIVVYSA 209 (398)
T ss_pred CCCHHHHHHhcC----cCceEEEEECCCCCCcEecCHHHHHHHHHH--cCCEEEEECCccccccC-CchhhCCCEEEeec
Confidence 268999999997 467999999999999999999999999999 99999999999865443 22345799999999
Q ss_pred CCcccCCC-cc-eeeeeCHHHHHH-hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPT-GM-GIVCASPKALEA-SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~-g~-g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+. ++ |+++.+++.+.+ +... . ...|. .++....+.+..+++. +..+.+
T Consensus 210 sK~l~g~g~~~GG~vv~~~~~i~~~~~~~-------------~-~~~g~----~~s~~~A~~~l~~L~t-----l~~R~~ 266 (398)
T PRK07504 210 TKHIDGQGRCLGGVVLSDKAWIEEHLQDY-------------F-RHTGP----SLSPFNAWTLLKGLET-----LPVRVR 266 (398)
T ss_pred cccccCCccceEEEEEeCcHHHHHHHHHH-------------H-HHhCC----CCCHHHHHHHHhccch-----HHHHHH
Confidence 99997643 23 677787776543 2210 0 01121 2333222222222222 566777
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+..+++..+.+.|++. ++. +.-| .+. ...+.++.|.+..+. ....|++.|+ -..+.+.-|. .
T Consensus 267 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~-~~~~~~slG~~~s 345 (398)
T PRK07504 267 QQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALK-IVRISNNLGDAKS 345 (398)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCC-cceecccCCCCCe
Confidence 8889999999999986 543 2222 111 013568899983221 1234555552 2233222221 1
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.+|+| .|-++.+|+..++.
T Consensus 346 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 390 (398)
T PRK07504 346 LITHPATTTHKNLSPEARAELGISEGFLRLS-AGLEDTDDLIEDLA 390 (398)
T ss_pred eeeCCCCCCcccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0 113469998 57777777766543
No 187
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.4e-24 Score=196.08 Aligned_cols=283 Identities=17% Similarity=0.122 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....+++++++++.|.+ .+++++||++++..++.+++.+||+|+++++.|.+.. +...+...++++..++
T Consensus 52 pt~~~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd----- 123 (386)
T PRK08045 52 PTRDVVQRALAELEGGA---GAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD----- 123 (386)
T ss_pred ccHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-----
Confidence 55779999999999953 3888999999999999999999999999999887543 4444555566766664
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
..|+++++++++ +++|+|++++|+||||.+.|+++|.++|++ +|+++++|+++..+....+. ..++|+++.|+
T Consensus 124 ~~d~e~l~~~l~----~~tklV~l~sP~NPtG~v~di~~I~~ia~~--~g~~vivDeay~~~~~~~pl-~~gaDivv~S~ 196 (386)
T PRK08045 124 QGDEQALRAALA----EKPKLVLVESPSNPLLRVVDIAKICHLARE--AGAVSVVDNTFLSPALQNPL-ALGADLVLHSC 196 (386)
T ss_pred CCCHHHHHHhcc----cCCeEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCCccccCCch-hhCCCEEEeec
Confidence 248899999987 467999999999999999999999999999 99999999999766443233 45789999999
Q ss_pred CCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++. ++++++++.... . ..|. +.+......+..+++. +..+++
T Consensus 197 tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~------------~--~~g~----~~~p~~~~l~~rgl~t-----l~~R~~ 253 (386)
T PRK08045 197 TKYLNGHSDVVAGVVIAKDPDVVTELAWWA------------N--NIGV----TGGAFDSYLLLRGLRT-----LVPRME 253 (386)
T ss_pred ceeccCCCCceeEEEEeCcHHHHHHHHHHH------------H--hcCC----CCCHHHHHHHHhhhcc-----HHHHHH
Confidence 999988776 477766 466665553210 0 1121 2333222222223322 677888
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCCceEEEEcCCCCC-HHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+..+++..+.+.|++. .+. +.-| ++. ...+.+++|.+..+.+ ...|++.|+ -..+.+.-|- .
T Consensus 254 ~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~s 332 (386)
T PRK08045 254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS-LFTLAESLGGVES 332 (386)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc-ceeEeccCCCCce
Confidence 9999999999999987 432 2112 111 1235688898832211 234555552 2222222221 0
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.||+| .|-++.+|+..++.
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 377 (386)
T PRK08045 333 LISHAATMTHAGMAPEARAAAGISETLLRIS-TGIEDGEDLIADLE 377 (386)
T ss_pred eEeCCCCcccccCCHHHHHhcCCCCCeEEEE-eCcCCHHHHHHHHH
Confidence 0 113569998 57777777776654
No 188
>PLN02263 serine decarboxylase
Probab=99.94 E-value=8.3e-24 Score=192.34 Aligned_cols=282 Identities=12% Similarity=0.075 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHHhcCCC-CceEEecCChhHHHHHHHHccC--CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC
Q 017726 40 VPALTKTLLEDIKKIFKTTS-GTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~-~~~v~~~~ggt~al~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (367)
..+...++.+++++++|.++ ...-++|+|||+++..++.+.. .+...++++...|+|. .+++..+|++++.||++
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv--~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDTL 208 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHH--HHHHHhcCCcceEeccC
Confidence 45678889999999999975 3356899999999998776532 2334667777777774 48899999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCc-----EEEEeeeeccCcee-------
Q 017726 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA-----LFLVDGVSSICAID------- 184 (367)
Q Consensus 117 ~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~-----~vi~D~~~~~~~~~------- 184 (367)
.++++|+++|+++|.+++ .+|-+|+.+.+.+++|.+.|+++|.++|++ +|+ |++||+|++...++
T Consensus 209 ~~g~mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDpi~eIa~i~~~--~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 209 VSGEIDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDDLDLVIKTLEE--CGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred CCCcCcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCCHHHHHHHHHH--cCCccCCeeEEEeccchhhHhhhcccccc
Confidence 999999999999998765 457788899999999999999999999999 775 99999998765443
Q ss_pred eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHH
Q 017726 185 FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (367)
Q Consensus 185 ~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 264 (367)
+++.. .+|.++.++|||+..|.++|+++.+++..+.+.. ...|+...+ ....++.+....+.++.+++
T Consensus 286 ~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~---~~~Yl~~~d--------~ti~gSR~g~~al~lW~~L~ 353 (470)
T PLN02263 286 VTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS---NVEYLASRD--------ATIMGSRNGHAPIFLWYTLN 353 (470)
T ss_pred cCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhcc---ChHhhCCCC--------CCcCCCCCcHHHHHHHHHHH
Confidence 23332 3899999999999999999999999776543321 111211000 01133444444578899999
Q ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCc
Q 017726 265 LIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGK 344 (367)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~ 344 (367)
.+..+|++++.+++.++++++.+.|++.|+....+ .....+.|..|. ++. ..+ |..+.. .+.
T Consensus 354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~----p~s~~V~f~~p~----~~~---~~~--gW~L~~-----~~~ 415 (470)
T PLN02263 354 RKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLN----ELSSTVVFERPK----DEE---FVR--RWQLAC-----QGN 415 (470)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeC----CCceEEEEecCc----hHH---hhc--ceEEcc-----CCC
Confidence 99999999999999999999999999998766553 223356666531 111 122 433332 124
Q ss_pred EEEEeecCCCCH
Q 017726 345 VFRIGHLGHLNE 356 (367)
Q Consensus 345 ~iRi~~~~~~~~ 356 (367)
.+++......+.
T Consensus 416 ~~Hivvmphv~~ 427 (470)
T PLN02263 416 IAHVVVMPSVTI 427 (470)
T ss_pred cEEEEEcCCCCH
Confidence 588887776553
No 189
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.3e-24 Score=179.99 Aligned_cols=304 Identities=18% Similarity=0.123 Sum_probs=233.3
Q ss_pred CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHH---HHHHHHHhCCceE
Q 017726 37 SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLL---WIDQQQRLNFNVD 111 (367)
Q Consensus 37 ~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~---~~~~~~~~g~~~~ 111 (367)
...+.++-+.+-.+++-++|+.+.+ ++++++.+--+...+.+. ..+|++||++..+.|..- ....+...+..
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~E-vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-- 147 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAGE-VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-- 147 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCCc-eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc--
Confidence 4566777888999999999999876 777777776666655543 356999999988766642 33444544443
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecccccc
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWG 191 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 191 (367)
.+-...++++++++++++ .+.+|++++.+.-||...|+.+|..++|+ +|++++.|-+|+.|..+.++...+
T Consensus 148 ---~~~~~~~~P~~~~~~~~d----d~AvV~L~~V~y~TGql~dm~aiT~~AH~--~galv~wDLAHsaGavp~~Lh~~g 218 (407)
T COG3844 148 ---YDLEGVIAPRALEEAITD----DVAVVLLSHVNYKTGQLLDMRAITALAHQ--HGALVGWDLAHSAGAVPVDLHAAG 218 (407)
T ss_pred ---ccceeeeChHHHHHhhcc----ceEEEEeccccccccceeeHHHHHHHHHh--cCceEEeehhcccCCcceeecccC
Confidence 223345578899999984 56899999999999999999999999999 999999999999999999999999
Q ss_pred ceEEEecCCCcccCCCc-ceeeeeCHHHHHHhccCCCCceeech-HHHHHHhh----cCCccCCCCcHHHHHHHHHHHHH
Q 017726 192 IDVALTGSQKALSLPTG-MGIVCASPKALEASKTAKSVRVFFDW-KDYIKFYN----LGTFWPYTPSIQLLYGLRAALDL 265 (367)
Q Consensus 192 ~d~~~~s~~K~~~g~~g-~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~al~~al~~ 265 (367)
+|+.+.|++|+++|.+| .+++++.+++.++..+.....+.... ....+.++ ...|..+++++..+.++..+|+.
T Consensus 219 aDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDi 298 (407)
T COG3844 219 ADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDI 298 (407)
T ss_pred CCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhh
Confidence 99999999999998777 58999999987776554443332110 00111111 22345557999999999999999
Q ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC
Q 017726 266 IFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV 341 (367)
Q Consensus 266 ~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~ 341 (367)
+.+.++.+++++...+.+++.+.++.. ++++.+|-.....+..+++..| ...++.+.|.++ ||..- ..
T Consensus 299 fa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~r-GVigD----~R 370 (407)
T COG3844 299 FADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDR-GVIGD----FR 370 (407)
T ss_pred hhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHc-Ccccc----cc
Confidence 999999999999999999999999885 5788887555566778989886 567899999755 87532 33
Q ss_pred CCcEEEEeecC-CCCHHHHH
Q 017726 342 AGKVFRIGHLG-HLNEVMFN 360 (367)
Q Consensus 342 ~~~~iRi~~~~-~~~~~~~~ 360 (367)
.++.+|+++.. +.+..|..
T Consensus 371 ~P~vlRfgftPlY~~~~DVw 390 (407)
T COG3844 371 EPDVLRFGFTPLYVSFVDVW 390 (407)
T ss_pred CCCeeeecCccceechhHHH
Confidence 56789999876 66665554
No 190
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6.3e-24 Score=192.65 Aligned_cols=282 Identities=14% Similarity=0.109 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|. +.+++++||++|+..++.+++.+||+|+++.+.|.+.. +.......|+++..++.
T Consensus 53 pt~~~Le~~lA~leg~---e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~---- 125 (388)
T PRK08861 53 PNRGLLEQTLSELESG---KGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ---- 125 (388)
T ss_pred chHHHHHHHHHHHhCC---CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC----
Confidence 5577999999999995 34899999999999999998999999999999877543 33444556788887763
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|+++++++++ +++++|++++|+||||.+.|+++|.++|++ +|+++++|+++..+....+. ..++|++++|+
T Consensus 126 -~d~e~l~~~i~----~~tklV~lesP~NPtG~v~dl~~I~~la~~--~gi~vIvDea~~~~~~~~pl-~~GaDivv~S~ 197 (388)
T PRK08861 126 -SDAAALDAALA----KKPKLILLETPSNPLVRVVDIAELCQKAKA--VGALVAVDNTFLTPVLQKPL-ELGADFVIHST 197 (388)
T ss_pred -CCHHHHHHhcC----cCCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCccccccCCCc-ccCCCEEEeec
Confidence 47899999987 467999999999999999999999999999 99999999999875443333 45899999999
Q ss_pred CCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
||+++|+.+ .|+++++ +++.+++.... ...|. ..+....+.+...++ -+.-+.+
T Consensus 198 tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~--------------~~~G~----~~~p~~a~l~~rgl~-----Tl~lR~~ 254 (388)
T PRK08861 198 TKYINGHSDVIGGVLITKTKEHAEELAWWG--------------NCIGA----TGTPFDSYMTLRGIR-----TLGARMR 254 (388)
T ss_pred ceeccCCCcceeEEEEecHHHHHHHHHHHH--------------hccCC----CCChHHHHHHHhcCC-----CHHHHHH
Confidence 999998765 3777665 44544443211 01122 233321111111111 2667788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
+..+++..+.+.|++. .+. +.-|. +. ...+.++.|.+..+. ....|++.|+ -..+.+.-| ..
T Consensus 255 ~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~-l~~~~~s~G~~~s 333 (388)
T PRK08861 255 VHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALA-LFSLAESLGGVES 333 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCC-cceEccCCCCCcc
Confidence 8999999999999987 332 22221 10 124568889983211 1223444442 222222222 11
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..++.||+| .|-++.+|+..++
T Consensus 334 l~~~p~~~~h~~~~~~~~~~~gi~~~liRls-vGlE~~~dli~Dl 377 (388)
T PRK08861 334 LICHPASMTHRAMGEEALAEAGVSQQLLRLS-VGLEDAQDLIADL 377 (388)
T ss_pred eeeCCCcccccccCHHHHHhcCCCCCeEEEE-eCcCCHHHHHHHH
Confidence 0 113469998 5777777776654
No 191
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=1e-23 Score=192.44 Aligned_cols=312 Identities=15% Similarity=0.123 Sum_probs=208.9
Q ss_pred CCCCCCcccccCCCCCChHHHHHHHccCC-------CCCCCCc----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHH
Q 017726 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNN-------EDYRSPA----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGA 72 (367)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~-------~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~a 72 (367)
-+.-+|.||..+..+++.+++.+++.++. .+..+.. ..+..+++++.+++++|.+. .+++ ++|+.+
T Consensus 7 ~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~-~sG~~a 83 (370)
T PRK05937 7 IDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIV-PSGYMA 83 (370)
T ss_pred EEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEE-CChHHH
Confidence 35567999999999999999999999874 2222222 56789999999999999854 3455 556677
Q ss_pred HHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCc
Q 017726 73 WESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETAT 150 (367)
Q Consensus 73 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~t 150 (367)
+..++..+..+||.|++....|.+.. .. .+........++ ..|++++++++++... +++++|++++++|++
T Consensus 84 ~~~~~~~~~~~~d~ii~d~~~H~sv~-~~-~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~ 156 (370)
T PRK05937 84 NLGLCAHLSSVTDYVLWDEQVHISVV-YS-LSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFK 156 (370)
T ss_pred HHHHHHHhCCCCCEEEEEhhhhHHHH-HH-HHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCC
Confidence 76665555567777776666665543 22 222222222232 3589999999875210 235677889999999
Q ss_pred cccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccc----ccc---ceEEEecCCCcccCCCcceeeeeCHHHHHHhc
Q 017726 151 GVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMD----EWG---IDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (367)
Q Consensus 151 G~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~----~~~---~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~ 223 (367)
|.+.|+++|.++|++ +|+++++|++|+.|.+..+.. .++ .++++.|++|.+ |+.|.|+++. ++..+.+.
T Consensus 157 G~i~pl~eI~~l~~~--~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~-~~~~~~~~ 232 (370)
T PRK05937 157 GTLAPLEQIIALSKK--YHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSS-SEVKQDLM 232 (370)
T ss_pred CCccCHHHHHHHHHH--cCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcC-HHHHHHHH
Confidence 999999999999999 999999999999876655431 122 236678889988 5788666544 55544433
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCcc
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEW 303 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 303 (367)
.... ...+ ..+.+...++++.++++.+.+.+ +..+++.+++++++.+.|...+ +
T Consensus 233 ~~~~-~~~~---------------s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~---- 286 (370)
T PRK05937 233 LNSP-PLRY---------------STGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----P---- 286 (370)
T ss_pred HhCC-CCee---------------cCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----C----
Confidence 2111 1111 11245556788889999998776 5567788888888887764321 1
Q ss_pred CCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 304 FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. ....+.++ +.+..++.+.|.+ .||.+.....+ ....+|++++.+++.+|++
T Consensus 287 -~-~~~~i~~~-~~~~~~~~~~L~~-~gi~v~~~~~~-~~~~iRis~~~~~t~edid 338 (370)
T PRK05937 287 -G-CVQPIFLP-GISEQELYSKLVE-TGIRVGVVCFP-TGPFLRVNLHAFNTEDEVD 338 (370)
T ss_pred -C-CEEEEEeC-ChhHHHHHHHHHH-CCeeEEeeCCC-CCCEEEEEcCCCCCHHHHH
Confidence 1 11234453 3456778888854 49988743333 2457999998777665543
No 192
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.94 E-value=5.4e-25 Score=194.36 Aligned_cols=224 Identities=17% Similarity=0.189 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC-
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG- 118 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 118 (367)
+....+++++.+++++|.+. .+++++|+|.++..++.+++.+||+|++..+.|.+.. ..+...|++++.++.+.+
T Consensus 57 ~~g~i~~~~~~~A~~~ga~~--~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~--~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 57 PTGPIKEAQELAARAFGAKH--TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI--NGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CChHHHHHHHHHHHHhCCCC--EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH--HHHHHCCCEEEEecCccCc
Confidence 34668899999999999764 4566899999999999999999999999999888864 345668999888876532
Q ss_pred -----CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC-----ceeeccc
Q 017726 119 -----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-----AIDFRMD 188 (367)
Q Consensus 119 -----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~-----~~~~~~~ 188 (367)
+.+|+++++++++++ ++++++++++| |++|.+.|+++|.++|++ +|+++++|++|+.. ..+.+..
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~--~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~--~g~~livDeA~~~~~~~~~~~~~~~~ 207 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEH--PDAKAAVITNP-TYYGICYNLRKIVEEAHH--RGLPVLVDEAHGAHFRFHPILPSSAA 207 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhC--CCceEEEEECC-CCCCEecCHHHHHHHHHh--cCCeEEEECcchhhhccCcccCcchh
Confidence 368999999999754 36899999987 789999999999999999 99999999998752 2233344
Q ss_pred cccceEEEecCCCcccCCCcceeeeeCHHHH--HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHH
Q 017726 189 EWGIDVALTGSQKALSLPTGMGIVCASPKAL--EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI 266 (367)
Q Consensus 189 ~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 266 (367)
..++|+++.|+||+++|+++.|++..+.+.. +++. .....++ ..+++...++++..+++.+
T Consensus 208 ~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~------------~~~~~~~-----ttsps~~~~asl~~a~~~~ 270 (294)
T cd00615 208 MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVN------------EALNLHQ-----STSPSYLILASLDVARAMM 270 (294)
T ss_pred hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHH------------HHHHHHC-----CCCcHHHHHHHHHHHHHHH
Confidence 4589999999999998777667777765421 1111 1111222 3368899999999999998
Q ss_pred HHhChHHHHHHHHHHHHHHHHHHH
Q 017726 267 FEEGLENVIERHRRLGKATRLAVE 290 (367)
Q Consensus 267 ~~~g~~~~~~~~~~~~~~l~~~L~ 290 (367)
.++| ++..++..++.+++++.|+
T Consensus 271 ~~~g-~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 271 ALEG-KELVEELIELALYARQEIN 293 (294)
T ss_pred HHHh-HHHHHHHHHHHHHHHHHHh
Confidence 7776 4567788888888888875
No 193
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.94 E-value=4.5e-24 Score=194.25 Aligned_cols=280 Identities=15% Similarity=0.121 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
...+++++.+++++|.+. +++++||+.|+..++. ++.+||+|+++++.|.+.. +...++..|++++.++..
T Consensus 47 p~~~~le~~la~l~g~~~---~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~--- 119 (378)
T TIGR01329 47 PTRTALESLLAKLDKADR---AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT--- 119 (378)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC---
Confidence 457899999999999843 5666778889987765 7899999999988877653 445667789999999864
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|+
T Consensus 120 --d~~~le~~i~----~~tklv~le~psnptg~v~dl~~I~~la~~--~g~~vivD~a~~~~~~~~~l-~~g~Di~v~S~ 190 (378)
T TIGR01329 120 --DLDKVKAALG----PKTKLVLLESPTNPLQKIVDIRKISEMAHA--QNALVVVDNTMMSPLLCNPL-ELGADIVYHSA 190 (378)
T ss_pred --CHHHHHHhcC----cCceEEEEECCCCCCCeeecHHHHHHHHHH--cCCEEEEECCCcccccCChh-hcCCcEEEEec
Confidence 7899999997 577999999999999999999999999999 99999999998765433233 45899999999
Q ss_pred CCcccCCCc--ceeeeeCHH-HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPK-ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++++++ +.+++..... ..|. ..+.. .+++-...-..+..+.+
T Consensus 191 tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~--------------~~G~----~~~~~-----~a~l~~~~l~tl~~R~e 247 (378)
T TIGR01329 191 TKFLAGHSDVMAGVLAVKGEEIAKKVYFLQN--------------STGS----GLAPF-----DCWLLLRGIKTLAIRIE 247 (378)
T ss_pred ceeccCCccceeEEEEeCcHHHHHHHHHHHH--------------hcCC----cCCHH-----HHHHHHccCCCHHHHHH
Confidence 999988766 688888554 4455543210 0121 12221 11221111123677788
Q ss_pred HHHHHHHHHHHHHHHc-CC-ccccCC----C--------ccCCCceEEEEcCCCCC-HHHHHHHHHhhCCeEEccCCC--
Q 017726 277 RHRRLGKATRLAVEAW-GL-KNCTQK----E--------EWFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGLN-- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~-~~~~~~----~--------~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gv~v~~g~~-- 339 (367)
+..+++..+.+.|++. .+ .+.-|. + ....+.+++|.+ .+.+ ..++++.| +.+++.++.|-.
T Consensus 248 ~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L-~~~~i~~s~G~~~s 325 (378)
T TIGR01329 248 KQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEAT-KLFSITVSFGSVNS 325 (378)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhC-cCcccccCCCCCCc
Confidence 8899999999999886 33 111111 0 012456899998 5554 66888888 566777775521
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..++.||+| .|-++.+|+..++
T Consensus 326 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl 369 (378)
T TIGR01329 326 LISMPCFMSHASIPAEVREERGLPEDLVRLS-VGIEDVDDLISDL 369 (378)
T ss_pred eeeCCCccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHH
Confidence 1 013469998 5777777776654
No 194
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.94 E-value=6.8e-24 Score=181.31 Aligned_cols=330 Identities=18% Similarity=0.185 Sum_probs=235.3
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCC------------CCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCCh-hHH
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTG-TGA 72 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~gg-t~a 72 (367)
...++++|++||..+|++|++.+.+.. .+||+..+.....+.++.+++++++|+++.|+|+.|| |+.
T Consensus 2 ~~~~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~q 81 (365)
T COG1932 2 SMPRVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHH
Confidence 345678899999999999999988832 3477778889999999999999999999888887766 577
Q ss_pred HHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCC--ceEEEeCC---CCCCCCHHHHHHHHhccCCCCccEEEEEecC
Q 017726 73 WESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNF--NVDVVESD---WGEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (367)
Q Consensus 73 l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~--~~~~v~~~---~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~ 147 (367)
+.++..+++.++..- ..+.++++....+.++..+. ++..+... ...-++++... +. ++...|.+|+.+
T Consensus 82 f~~~p~nLl~~~~~~-yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~----~~~ayv~~~~Ne 154 (365)
T COG1932 82 FAMAPMNLLGKRGTD-YVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS----DNDAYVHFCWNE 154 (365)
T ss_pred HHHHHHhhhcccCce-eEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC----CCccEEEEecCC
Confidence 888888887665430 23345666543355566653 22222211 12223444332 23 224679999999
Q ss_pred CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCC
Q 017726 148 TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (367)
Q Consensus 148 n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~ 227 (367)
+.+|+..+-. .....+.++++|.++..++.++|+.+ .|++.++.+|.+ ||.|++++++++++++++.....
T Consensus 155 Ti~Gv~v~~~------p~~~~~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnl-GpaGltvvIvr~~~l~r~~~~~~ 225 (365)
T COG1932 155 TISGVEVPEL------PDIGSDGLLVADASSAILSRPIDVSK--YDVIYAGAQKNL-GPAGLTVVIVRPDLLERAESYTL 225 (365)
T ss_pred cccceEccCC------CCCCCCceEEEecccHHhcCCCChhH--cceEEEehhhcc-CccceEEEEEcHHHHhcccccCC
Confidence 9999888721 11113488999999999999999984 799999999999 69999999999999999876532
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
++ .+++.. ....+ ...+||++..+..+..+++|+...| ++.+.++.+++++.|++.+++.++....-.+..++.
T Consensus 226 P~-if~y~~---~~~~~-s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~ 300 (365)
T COG1932 226 PS-IFDYLT---HADNG-SMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSR 300 (365)
T ss_pred ch-Hhhchh---hhccC-CccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccc
Confidence 21 122222 11222 2378999999999999999999887 999999999999999999999864433323456888
Q ss_pred ceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
..++|.+.+..=.+.|.+.+.++ |+...-| +.. .+.+|+++++..+-++.
T Consensus 301 mnV~f~~~~~~ld~~fv~eae~~-gl~~lkG-hr~-vgGmRasiynA~~~e~v 350 (365)
T COG1932 301 MNVTFTLVDAELDKGFVAEAEAA-GLIYLKG-HRS-VGGLRASIYNAVPLEDV 350 (365)
T ss_pred eeEEEEcCcHHHHHHHHHHHHHc-CCceecc-ccC-CCceeeeeecCCCHHHH
Confidence 88889885332234566666444 7666656 222 23399999998776554
No 195
>PRK08637 hypothetical protein; Provisional
Probab=99.94 E-value=5.5e-24 Score=195.54 Aligned_cols=315 Identities=12% Similarity=0.007 Sum_probs=196.7
Q ss_pred ccCCCCCChHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhc-----CCCC--ceEEecCChhHHHHHHHHccCCCC
Q 017726 13 FVPGPVHIPDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFK-----TTSG--TPFLIPTTGTGAWESALTNTLSPG 84 (367)
Q Consensus 13 ~~~~p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~-----~~~~--~~v~~~~ggt~al~~~~~~~~~~g 84 (367)
.-++.+.+-+.+.+++.+.... ..+|....+..++|+.+++++. .... ++|++|+|+++++.+++.+++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~g 93 (388)
T PRK08637 14 TEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQG 93 (388)
T ss_pred ecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCC
Confidence 4455556666666666653222 3345445667789999888763 2222 458999999999999999999999
Q ss_pred CeEEEEeCCcchHHHHHHHHHhCCceEEEeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHH---HH
Q 017726 85 DRIISFLIGQFSLLWIDQQQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK---VR 160 (367)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~---i~ 160 (367)
|.|++++|.|+.+.. .+....|.+++.+++. +++.+|+++++++++....+..+++++++||||||.+++.++ |.
T Consensus 94 d~Vlv~~P~y~~~~~-~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~ 172 (388)
T PRK08637 94 DTVLLPDHNWGNYKL-TFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIV 172 (388)
T ss_pred CEEEEcCCCCccHHH-HHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 999999997766531 2234579999999984 456789999999887211024467888999999999998555 55
Q ss_pred HHHHh---cCCCcEEEEeeeeccCcee----ec----c-ccccce--EEEecCCCcccCCCc--ceeeeeC------HHH
Q 017726 161 KLLDE---YRHPALFLVDGVSSICAID----FR----M-DEWGID--VALTGSQKALSLPTG--MGIVCAS------PKA 218 (367)
Q Consensus 161 ~~~~~---~~~~~~vi~D~~~~~~~~~----~~----~-~~~~~d--~~~~s~~K~~~g~~g--~g~~~~~------~~~ 218 (367)
++|++ ..++++||+|++|...... .+ . ...+.. +.+.|++|.+. .+| +|+++.. +++
T Consensus 173 ~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~-~pGlRlG~~~~~~~~~~~~~l 251 (388)
T PRK08637 173 EAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEF-VWGFRVGFITFGTKAGSSQTV 251 (388)
T ss_pred HHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCC-CcccceEEEEEccccCCcHHH
Confidence 55442 1279999999998643211 01 0 111122 33458999764 444 6999854 566
Q ss_pred HHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHc----C
Q 017726 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-EEGLENVIERHRRLGKATRLAVEAW----G 293 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-~~g~~~~~~~~~~~~~~l~~~L~~~----g 293 (367)
++.+..... .... .. .+..+.....++..++..-. ...+++.++.++++.+.+.+.|++. +
T Consensus 252 ~~~~~~~~~-----------~~~~-~~--~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~ 317 (388)
T PRK08637 252 KEALEKKVK-----------GLIR-SN--ISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDA 317 (388)
T ss_pred HHHHHHHHH-----------HHhh-cc--cCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 665542100 0000 00 11234433334443432100 0113444555677777777888765 3
Q ss_pred CccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC
Q 017726 294 LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~ 352 (367)
+.+..+ .+++++|++++ +.+..+++++|.+++||.+... .++++||++..
T Consensus 318 ~~~~~~----~~g~~~~~~l~-~~~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~ 367 (388)
T PRK08637 318 WQAYPF----NSGYFMCLKLK-GVDAEELRVHLLEKYGIGTIAL----NETDLRIAFSC 367 (388)
T ss_pred cccccc----cceEEEEecCC-hHHHHHHHHHHhhhcceEEEec----cCCceEEEeec
Confidence 555554 46667888874 4567889999976779988642 34579999754
No 196
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=9.2e-24 Score=193.25 Aligned_cols=213 Identities=20% Similarity=0.154 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. . ++++||++|+.+++.+++.+||+|+++.+.|.+.. +...++..|+++..++.
T Consensus 60 p~~~~Le~~lA~l~g~~~--~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~---- 132 (405)
T PRK08776 60 PTRDLLGEALAELEGGAG--G-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL---- 132 (405)
T ss_pred hHHHHHHHHHHHHhCCCc--e-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC----
Confidence 456789999999999743 3 56677899999999999999999999999877643 44556667888888865
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|+++++++++ +++|+|++++|+||||.+.|+++|.++|++ +|+++++|++|..+....+. ..++|++++|+
T Consensus 133 -~d~~~l~~~i~----~~tklV~l~~P~NPtG~v~dl~~I~~la~~--~gi~vIvD~a~a~~~~~~pl-~~gaDivv~S~ 204 (405)
T PRK08776 133 -TDPRSLADALA----QSPKLVLIETPSNPLLRITDLRFVIEAAHK--VGALTVVDNTFLSPALQKPL-EFGADLVLHST 204 (405)
T ss_pred -CCHHHHHHhcC----cCCeEEEEECCCCCCCccCCHHHHHHHHHH--cCCEEEEECCCcccccCCcc-cccCCEEEecC
Confidence 27899999987 467999999999999999999999999999 99999999999765432222 35789999999
Q ss_pred CCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++. ++++.+++..... ..|. .++......+...+++ ++.+.+
T Consensus 205 tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~--------------~~g~----~~s~~~a~l~~~gl~t-----l~~r~~ 261 (405)
T PRK08776 205 TKYINGHSDVVGGAVVARDAELHQQLVWWAN--------------ALGL----TGSPFDAFLTLRGLRT-----LDARLR 261 (405)
T ss_pred ceeecCCCCceEEEEEeCCHHHHHHHHHHHH--------------hcCC----CCCHHHHHHHHhhhCc-----HHHHHH
Confidence 999987754 376666 4566555542110 0121 2444333333333433 567788
Q ss_pred HHHHHHHHHHHHHHHc
Q 017726 277 RHRRLGKATRLAVEAW 292 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (367)
+..+++..+.+.|++.
T Consensus 262 ~~~~na~~la~~L~~~ 277 (405)
T PRK08776 262 VHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8999999999999986
No 197
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.94 E-value=3.9e-24 Score=196.35 Aligned_cols=310 Identities=15% Similarity=0.153 Sum_probs=229.0
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL- 81 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~- 81 (367)
.+.+....+++.+++...+.+...... ..++.......++..+++++++.+..-.-.+|+|||+|+.+++.+..
T Consensus 62 p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~ 141 (460)
T COG0076 62 PRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARE 141 (460)
T ss_pred cceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHH
Confidence 345667778888888888887775433 22445567788899999999999755457999999999998775421
Q ss_pred -------C-C-----CCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecC
Q 017726 82 -------S-P-----GDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (367)
Q Consensus 82 -------~-~-----gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~ 147 (367)
. . ...|+++...|+| +.+.++.+|++++.+++.. +.++|+++++++|++++... +|+.+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~P~ii~s~~aH~s--~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g--~vV~~aGt 217 (460)
T COG0076 142 RWRKRALAESGKPGGKPNIVCSETAHFS--FEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG--VVVGTAGT 217 (460)
T ss_pred HHHHHhhhcccccCCCCeEEecCcchhH--HHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc--eEEEEecC
Confidence 0 0 1158888888887 4588999999999999988 68999999999999865211 48888999
Q ss_pred CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee-------ccccccceEEEecCCCcccCCCcceeeeeCHH-HH
Q 017726 148 TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-------RMDEWGIDVALTGSQKALSLPTGMGIVCASPK-AL 219 (367)
Q Consensus 148 n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~-~~ 219 (367)
+++|.+.|+++|.++|++ ++++++||+|++.+.+++ +....++|.++.++||++..|.|+|+++.+++ ..
T Consensus 218 T~~G~iDdi~~ia~ia~~--~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l 295 (460)
T COG0076 218 TDTGSIDDIEELADIAEE--YGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEAL 295 (460)
T ss_pred CCCCccCCHHHHHHHHHH--cCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHh
Confidence 999999999999999999 999999999998776643 22333789999999999999999999998887 34
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC-Ccccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKNCT 298 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 298 (367)
++......+ +..... ..++ ...++.+....+++++.+..+..+|++++.+++.++++++.+.|++.| +++..
T Consensus 296 ~~~~~~~~~--yl~~~~-~~~~----ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~ 368 (460)
T COG0076 296 RRILIFADY--YLPGGG-IPNF----TILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN 368 (460)
T ss_pred hhhhhcccc--cCCCCC-cCce----eEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec
Confidence 444322111 110000 0000 011234444678899999999999999999999999999999999995 88887
Q ss_pred CCCccCCCceEEEEcCCCCC-HHHHHHHHHhhCCeEEc
Q 017726 299 QKEEWFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gv~v~ 335 (367)
+ ...++++|+.++..+ ..+..+++.+ .|..+.
T Consensus 369 ~----p~l~~V~fr~~~~~~~~~~~~~~~~~-~gw~v~ 401 (460)
T COG0076 369 E----PELPIVAFRLKDDEDTLADLSERLDR-RGWQVP 401 (460)
T ss_pred C----CccceEEEEcCCcccchhchHHHHHh-cCceee
Confidence 5 245688999854433 4455555543 355554
No 198
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.94 E-value=5.3e-24 Score=194.65 Aligned_cols=314 Identities=12% Similarity=0.066 Sum_probs=210.0
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~ 98 (367)
.+.++.++++..... .|.......++++.+++++|.+. +++|+||+.|+.+++.+++.|||.| ++++.+.++.
T Consensus 33 ams~~~~~a~~~gd~---~Y~~~~g~~~Leeaia~~~g~~~---vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~ 105 (431)
T cd00617 33 AMSDYQWAAMMLGDE---AYAGSKSFYDLEDAVQDLFGFKH---IIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTR 105 (431)
T ss_pred HHHHHHHHHHHhCCC---ccCCCCCHHHHHHHHHHHHCCCe---EEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchH
Confidence 456667777764322 23333556799999999999864 8999999999999999999999977 4555333332
Q ss_pred HHHHHHHhCCceEEEeCCCC----------CCCCHHHHHHHHhccCCCCccEEEEEecCCCc-ccccc---HHHHHHHHH
Q 017726 99 WIDQQQRLNFNVDVVESDWG----------EGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTNN---LSKVRKLLD 164 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~----------~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t-G~~~~---~~~i~~~~~ 164 (367)
...+..|.+++.+++++. +.+|++++++++++++.+++++|+++.|+||+ |.+.+ +++|.++|+
T Consensus 106 --~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~ 183 (431)
T cd00617 106 --GHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAH 183 (431)
T ss_pred --HHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHH
Confidence 456778999999988632 34899999999987532458999999999998 88886 457899999
Q ss_pred hcCCCcEEEEeeeeccC-----------ceeecccc------ccceEEEecCCCcccCCCcceeeeeCH-HHHHHhccCC
Q 017726 165 EYRHPALFLVDGVSSIC-----------AIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAK 226 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~-----------~~~~~~~~------~~~d~~~~s~~K~~~g~~g~g~~~~~~-~~~~~~~~~~ 226 (367)
+ +|++||.|+++... ....+..+ ...|.+++|++|.+.++.| |++++++ ++++++....
T Consensus 184 ~--~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~~~~~~ 260 (431)
T cd00617 184 K--YGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEEARQRV 260 (431)
T ss_pred H--cCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHHHHHhc
Confidence 9 99999999996532 11111111 1468899999998766665 8899886 5877766321
Q ss_pred CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
.. . + +..+.+..+...+.++..++....+ .+.+.++ .+.++++.+.|++.|+++..| .++
T Consensus 261 ~~---~---------~-~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~-~~~r~~l~~~L~~~G~~v~~P----~Gg 320 (431)
T cd00617 261 VL---Y---------E-GFVTYGGMAGRDMEALAQGLREAVE--EDYLRHR-VEQVRYLGDRLDEAGVPIVEP----AGG 320 (431)
T ss_pred cc---c---------C-CccccccccHHHHHHHHHHHHhccc--HHHHHHH-HHHHHHHHHHHHHCCCCccCC----Ccc
Confidence 10 0 0 1001122444444455445443211 2233333 345599999999999999887 466
Q ss_pred ceEEEEcCC--------CCCHHHHHHHHHhhCCeEEcc-CC-----CCCC-------CcEEEEeecC---CCCHHHHHHh
Q 017726 307 TVTAVIVPS--------HINSSEIVRRAWQRYNLSLGL-GL-----NKVA-------GKVFRIGHLG---HLNEVMFNFQ 362 (367)
Q Consensus 307 ~~~~~~~~~--------~~~~~~l~~~L~~~~gv~v~~-g~-----~~~~-------~~~iRi~~~~---~~~~~~~~~~ 362 (367)
+.++++.+. ..++.+|+.+|.++.||.+.. |. .+.. -..+|+++.= +.+..|...+
T Consensus 321 h~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~ 400 (431)
T cd00617 321 HAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAA 400 (431)
T ss_pred eEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHH
Confidence 778888742 124778998898898998642 32 2221 1459998632 3445554444
Q ss_pred hh
Q 017726 363 LL 364 (367)
Q Consensus 363 ~l 364 (367)
.|
T Consensus 401 ~~ 402 (431)
T cd00617 401 AV 402 (431)
T ss_pred HH
Confidence 44
No 199
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.94 E-value=1.1e-23 Score=192.41 Aligned_cols=284 Identities=15% Similarity=0.142 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.+++++|.+. +++++||++|+..++.+++.+||+|+++++.|.+.. +...+...|++++.++.+
T Consensus 60 ~p~~~~le~~la~l~g~~~---~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 134 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEA---CVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT-- 134 (390)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC--
Confidence 4567899999999999754 678899999999999888999999999988776654 445567789999999864
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|
T Consensus 135 ---d~~~l~~~i~----~~tklV~ie~p~NptG~v~dl~~I~~la~~--~gi~livD~t~~~~~~~~pl-~~g~Divv~S 204 (390)
T PRK08133 135 ---DLDAWRAAVR----PNTKLFFLETPSNPLTELADIAALAEIAHA--AGALLVVDNCFCTPALQQPL-KLGADVVIHS 204 (390)
T ss_pred ---CHHHHHHhcC----cCCeEEEEECCCCCCCCcCCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hhCCcEEEee
Confidence 7899999987 467999999999999999999999999999 99999999998655432222 3478999999
Q ss_pred CCCcccCCCc-c-eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG-M-GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g-~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.. + |+++.+++.++++.... + ..|. .++.. ..+.++.-+. .+..+.+
T Consensus 205 ~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~-------------~-~~g~----~~~~~---~a~~~l~gl~--tl~~R~~ 261 (390)
T PRK08133 205 ATKYLDGQGRVLGGAVVGSKELMEEVFGFL-------------R-TAGP----TLSPF---NAWVFLKGLE--TLSLRME 261 (390)
T ss_pred cceeecCCcceEeEEEEcCHHHHHHHHHHH-------------H-HhCC----CCCHH---HHHHHHcccc--hHHHHHH
Confidence 9999975432 3 77888888766554210 0 0121 12221 1122222221 2666777
Q ss_pred HHHHHHHHHHHHHHHc-CCccc-cCC----C--------ccCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 277 RHRRLGKATRLAVEAW-GLKNC-TQK----E--------EWFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~-~~~----~--------~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
+..+++..+.+.|++. ++..+ -|. + ....+.++.|.+..+. ....|++.|+ -..+.+.-| ..
T Consensus 262 ~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~-l~~~~~slG~~~s 340 (390)
T PRK08133 262 AHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATR-LISITANLGDTKT 340 (390)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCC-cceEeccCCCcce
Confidence 8889999999999987 54322 121 0 0123568889983221 1234444442 222222222 10
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.||+| .|-++.+|++.++-
T Consensus 341 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 385 (390)
T PRK08133 341 TITHPATTTHGRLSPEARAAAGITEGLIRVA-VGLEDVADIKADLA 385 (390)
T ss_pred eeecCCCCCcccCCHHHHHhcCCCCCeEEEE-eCcCCHHHHHHHHH
Confidence 0 013469998 57777787776653
No 200
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=4.2e-23 Score=188.98 Aligned_cols=325 Identities=11% Similarity=0.034 Sum_probs=212.9
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
..++.|+-....+.+-+.+.+++.++..+.. .|.......++++.+++++|.++ .+++ ++|+.+...++.+++
T Consensus 3 f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~-~sG~~a~~~~i~~l~ 79 (392)
T PLN03227 3 FATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES--AILY-SDGASTTSSTVAAFA 79 (392)
T ss_pred CcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCc--EEEe-cCcHHHHHHHHHHhC
Confidence 4567777777777788888888888654321 23445688999999999999864 4555 556666668888889
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcc-------CCCCccEEEEEecCCCccccc
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD-------TAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~-------~~~~~~lv~~~~~~n~tG~~~ 154 (367)
++||.|++.++.|.+.. ..+...+.+++.++.+.. -+++.+.+.+... ..+++++|++.++.|++|.+.
T Consensus 80 ~~GD~Vl~~~~~h~s~~--~~~~l~~~~~~~~~~~d~--~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~ 155 (392)
T PLN03227 80 KRGDLLVVDRGVNEALL--VGVSLSRANVRWFRHNDM--KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA 155 (392)
T ss_pred CCCCEEEEeccccHHHH--HHHHHcCCeEEEeCCCCH--HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc
Confidence 99999999999887754 223555677776665411 1233333344321 113679999999999999999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeeeccCcee---------eccc-cccceEEEecCCCcccCCCcceeeeeCHHHHHHhcc
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMD-EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~-~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~ 224 (367)
|++++.++|++ +|+++++|++|+++... +... ..++|+++.|.+|.+ |+.| |++++++++++.+..
T Consensus 156 ~l~~i~~l~~~--~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~g-g~v~~~~~~~~~~~~ 231 (392)
T PLN03227 156 PLKELVALKEE--FHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVG-GMTVGSEEVVDHQRL 231 (392)
T ss_pred CHHHHHHHHHH--cCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccC-cEEecCHHHHHHHHH
Confidence 99999999999 99999999999855321 0111 236799999999987 4665 888889888765542
Q ss_pred CCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCc--
Q 017726 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEE-- 302 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-- 302 (367)
.... .++ ..+.+...+.+..+++....+ .+++.++.+++.+++++.|++.+++.+..-..
T Consensus 232 ~~~~---------------~~~-~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~ 293 (392)
T PLN03227 232 SGSG---------------YCF-SASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRL 293 (392)
T ss_pred hCcC---------------ccc-cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccccccc
Confidence 1110 111 112223223333344444333 24677889999999999998765442221000
Q ss_pred ----cCCCceEEEEcCCCCC---------HHHHHHHHHhhCCeEEcc-CC------CCCCCcEEEEeecCCCCHHHHH
Q 017726 303 ----WFSDTVTAVIVPSHIN---------SSEIVRRAWQRYNLSLGL-GL------NKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 303 ----~~~~~~~~~~~~~~~~---------~~~l~~~L~~~~gv~v~~-g~------~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...+.++.+.+.+... ..++++.+.++ |+.+.+ +. ...++..+|++.+..++++|+.
T Consensus 294 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~ 370 (392)
T PLN03227 294 VITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDID 370 (392)
T ss_pred ccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHH
Confidence 0124466677643211 13788888655 998863 21 1233567999999988877665
No 201
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.94 E-value=2.8e-23 Score=188.32 Aligned_cols=282 Identities=12% Similarity=0.147 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HH-HHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WI-DQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~-~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. +++++||++|+..++.+++++||+|+++++.|++.. +. ..++..|+++..++..
T Consensus 50 Pt~~~lE~~lA~l~g~~~---~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~--- 123 (377)
T TIGR01324 50 LTHFALQDAMCELEGGAG---CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL--- 123 (377)
T ss_pred ccHHHHHHHHHHHhCCCc---EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC---
Confidence 556789999999999653 778899999999999999999999999999876653 22 3456678888777543
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
+.++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++|+.+.. ....+.++|++++|.
T Consensus 124 --~~e~l~~~i~----~~tklV~lesp~Np~g~~~dl~~I~~la~~--~g~~livD~t~a~g~~-~~pl~~gaDivv~S~ 194 (377)
T TIGR01324 124 --IGEDIATLIQ----PNTKVLFLEAPSSITFEIQDIPAIAKAARN--PGIVIMIDNTWAAGLL-FKPLEHGVDISIQAG 194 (377)
T ss_pred --CHHHHHHhcC----CCceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCccccc-cCccccCceEEEecC
Confidence 2378888887 577999999999999999999999999999 9999999999998765 334456899999999
Q ss_pred CCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~ 277 (367)
+|+++|+.+ .|+++.+++..+++... . ...|. +.+......+..+++. +..++++
T Consensus 195 tK~l~G~~d~~gG~v~~~~~~~~~l~~~-------------~-~~~G~----~l~p~~a~~~~rgl~t-----l~~R~~~ 251 (377)
T TIGR01324 195 TKYLVGHSDIMIGTVVANARTWDQLREH-------------S-YLMGQ----MVDADDAYTTLRGLRT-----LGVRLKQ 251 (377)
T ss_pred ceeccCCCCceEEEEEeCHHHHHHHHHH-------------H-HHhCC----CCCHHHHHHHHhhhhh-----HHHHHHH
Confidence 999988765 48888988876655421 0 01122 2333322222223332 4556788
Q ss_pred HHHHHHHHHHHHHHc-CC-ccccCC----Cc--------cCCCceEEEEcCC-CC-CHHHHHHHHHhhCCeEEccCCC--
Q 017726 278 HRRLGKATRLAVEAW-GL-KNCTQK----EE--------WFSDTVTAVIVPS-HI-NSSEIVRRAWQRYNLSLGLGLN-- 339 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~-g~-~~~~~~----~~--------~~~~~~~~~~~~~-~~-~~~~l~~~L~~~~gv~v~~g~~-- 339 (367)
.++++..+.+.|++. .+ .++-|. +. ...+.++.|.+.. +. ...+|++.|+ ..++.+.-|-.
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~-~~~~~~slG~~~s 330 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQ-LFGLGYSWGGYES 330 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC-cceEeccCCCccc
Confidence 899999999999986 33 233221 10 1246788999832 11 2445666663 33444433310
Q ss_pred ----C-------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ----K-------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ----~-------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..+..+|+| .|-++.+|+..++
T Consensus 331 l~~~~~~~~~~~~~~~~~~~~~liR~s-vGlE~~~dl~~dl 370 (377)
T TIGR01324 331 LALCNQPELGHRPNIKRNLEGPLIRVH-IGLENVDDLKADL 370 (377)
T ss_pred eeecCCCCCCHHHHHhccCCCCEEEEE-eCCCCHHHHHHHH
Confidence 0 123469998 5777777776654
No 202
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=5.2e-24 Score=195.27 Aligned_cols=287 Identities=14% Similarity=0.152 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. +++++||++|+..++.+++.+||+|+++.+.|.+.. +...++..|++++.++..
T Consensus 63 ~p~~~~Le~~iA~~~g~~~---~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 137 (400)
T PRK06234 63 NPTSTEVENKLALLEGGEA---AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-- 137 (400)
T ss_pred CccHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence 3557799999999999643 677899999999989888999999999998776654 345567789999998764
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++|+|++++|+||||.+.|+++|.++|+++.+|+++++|++++.+....+. ..++|++++|
T Consensus 138 ---d~e~l~~~i~----~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~g~Divv~S 209 (400)
T PRK06234 138 ---NLEEVRNALK----ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QLGADVVVHS 209 (400)
T ss_pred ---CHHHHHHHhc----cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hhCCcEEEee
Confidence 7999999997 4679999999999999999999999999993239999999999876543222 3478999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.. .|++++++++++++..... +...|. ..+....+.+...++ .++.+.+
T Consensus 210 ~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~------------~~~~g~----~l~p~~a~l~~~~l~-----tl~~r~~ 268 (400)
T PRK06234 210 ATKYLNGHGDVIAGFVVGKEEFINQVKLFGI------------KDMTGS----VIGPFEAFLIIRGMK-----TLQIRME 268 (400)
T ss_pred ccccccCCCCceeEEEEecHHHHHHHHHHHH------------HHhcCC----CCCHHHHHHHHhccC-----cHHHHHH
Confidence 9999975432 4999999988777642110 000011 233322111111222 2556777
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+..+++..+.+.|++. .+. ++-|. +. ...+.++.|.+..+. ...+|++.|. -.++.+.-|- .
T Consensus 269 ~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~-~~~~~~s~G~~~s 347 (400)
T PRK06234 269 KHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVK-LATLAVSLGDAET 347 (400)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCC-cceEeccCCCCCc
Confidence 8889999999999886 331 22221 10 124668889984231 2345666663 3344443331 1
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..++.+|+| .|-++.+|+..++
T Consensus 348 l~~~p~~~~~~~~~~~~~~~~gi~~~l~R~s-vGlE~~~dl~~dl 391 (400)
T PRK06234 348 LIQHPASMTHSPYTAEERKEAGISDGLVRLS-VGLEDVDDIIADL 391 (400)
T ss_pred eecCCccCCCCCCCHHHHHhcCCCCCeEEEE-eCCCCHHHHHHHH
Confidence 1 113569998 5777777776654
No 203
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=4.6e-24 Score=195.80 Aligned_cols=251 Identities=14% Similarity=0.101 Sum_probs=180.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHH-HHHHhCCceEEEeCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WID-QQQRLNFNVDVVESDW 117 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~-~~~~~g~~~~~v~~~~ 117 (367)
....+++++.+++++|.+. +++++||++|+..++.+++++||+|++..+.|.+.. +.. ..+..|++++.++..
T Consensus 75 ~Pt~~~LE~~lA~l~g~~~---~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~- 150 (418)
T PLN02242 75 NPTVLNLGRQMAALEGTEA---AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDIT- 150 (418)
T ss_pred ChhHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCC-
Confidence 4678899999999999865 567899999999999999999999999988766553 111 224478887777653
Q ss_pred CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEe
Q 017726 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALT 197 (367)
Q Consensus 118 ~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~ 197 (367)
|++++++++++ .++|+|++++|+||||.+.|+++|.++|++ +|++|++|++++.+. ++....++|+++.
T Consensus 151 ----d~e~l~~~i~~---~~tklV~lesp~NPtG~v~dl~~I~~la~~--~gi~livDea~~~~~--~~~~~~g~divv~ 219 (418)
T PLN02242 151 ----DLEAVKKAVVP---GKTKVLYFESISNPTLTVADIPELARIAHE--KGVTVVVDNTFAPMV--LSPARLGADVVVH 219 (418)
T ss_pred ----CHHHHHHhcCc---CCCEEEEEecCCCCCCcccCHHHHHHHHHH--hCCEEEEECCCCccC--CCHHHcCCcEEEE
Confidence 79999999974 147999999999999999999999999999 999999999997443 3434457899999
Q ss_pred cCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 198 GSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 198 s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
|++|+++|+.. .|++++++++++++....... ....|. .++. ..+++......-+..++
T Consensus 220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~----------~~~~g~----~~~~-----~~A~l~~~~l~tl~~r~ 280 (418)
T PLN02242 220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGA----------LMLLGP----TMNP-----KVAFELSERLPHLSLRM 280 (418)
T ss_pred eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh----------hhccCC----CCCH-----HHHHHHHcCCCcHHHHH
Confidence 99999976543 489999999887766431100 000111 1222 22222222222256677
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCC----Cc-----------cCCCceEEEEcCCCC-CHHHHHHHH
Q 017726 276 ERHRRLGKATRLAVEAWGLKNCTQK----EE-----------WFSDTVTAVIVPSHI-NSSEIVRRA 326 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~g~~~~~~~----~~-----------~~~~~~~~~~~~~~~-~~~~l~~~L 326 (367)
+++.++++++.+.|++.++.+.-|. +. ...+.+++|.+. +. ....|++.|
T Consensus 281 ~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l 346 (418)
T PLN02242 281 KEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD-TEERANRLMRYL 346 (418)
T ss_pred HHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-CHHHHHHHHHHh
Confidence 8899999999999999877666442 10 124568889883 32 234566655
No 204
>PRK05968 hypothetical protein; Provisional
Probab=99.93 E-value=3.7e-24 Score=195.57 Aligned_cols=283 Identities=15% Similarity=0.153 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. . ++++||+.|+..++.+++.+||+|+++.+.|.+.. +...+...|+++..++.+
T Consensus 62 ~p~~~~le~~lA~l~g~~~--a-v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAED--A-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-- 136 (389)
T ss_pred ChhHHHHHHHHHHHhCCCc--E-EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC--
Confidence 3557899999999999865 3 44577889999988888999999999998877653 445677789999988754
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|++++++++. ++|+|++++|.|+++.+.|+++|.++|++ +|+++++|++++.+...-+ ...++|++++|
T Consensus 137 ---d~~~l~~~i~-----~tklV~ie~pt~~~~~~~dl~~i~~la~~--~gi~vivD~a~a~~~~~~p-~~~g~Divv~S 205 (389)
T PRK05968 137 ---DEEAVAKALP-----GAKLLYLESPTSWVFELQDVAALAALAKR--HGVVTMIDNSWASPVFQRP-ITLGVDLVIHS 205 (389)
T ss_pred ---CHHHHHHhcc-----cCCEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCcchhccCc-hhcCCcEEEee
Confidence 7899988873 56999999999999999999999999999 9999999999876543222 23578999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.+ .|+++.++++++++...... . .|. ..+....+.+..+++ .+..+.+
T Consensus 206 ~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~------------~-~g~----~~~~~~A~~~l~~L~-----tl~~r~~ 263 (389)
T PRK05968 206 ASKYLGGHSDTVAGVVAGSKEHIARINAEAYP------------Y-LGA----KLSPFEAWLLLRGLR-----TLPLRMK 263 (389)
T ss_pred ccccccCCCCeEEEEEEECHHHHHHHHHHHHH------------h-CCC----CCChHHHHHHHcccC-----cHHHHHH
Confidence 9999987654 58888999888776532100 0 111 122222122222222 2567778
Q ss_pred HHHHHHHHHHHHHHHc-CCcccc-CCCc-------cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC------
Q 017726 277 RHRRLGKATRLAVEAW-GLKNCT-QKEE-------WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV------ 341 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~------ 341 (367)
+..+++..+.+.|++. ++..+. |.-. ...+.++.|.+..+.+..+|++.|. ..++.+..|....
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~-~~~~~~s~G~~~slv~p~~ 342 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALK-LFRLGVSWGGHESLVVPAE 342 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCC-ccEEecCCCCCCceeeeCc
Confidence 8888999999999987 664443 2100 0123488888843456678888885 4466665442111
Q ss_pred -----------------CCcEEEEeecCCCCHHHHHHhh
Q 017726 342 -----------------AGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 342 -----------------~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
.++.+|+| .|..+.+|+..++
T Consensus 343 ~~~~~~~~~~~~~~~gi~~~liR~S-vGlE~~~dl~~dl 380 (389)
T PRK05968 343 VVLQQKAQPNSAARFGVSPRSVRLH-VGLEGTEALWADL 380 (389)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHH
Confidence 13569999 5777777776554
No 205
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.93 E-value=7.9e-24 Score=194.05 Aligned_cols=321 Identities=15% Similarity=0.088 Sum_probs=207.9
Q ss_pred hHHHHHHHccCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHH
Q 017726 21 PDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (367)
.++-++++.+..... ..+ .....++++.+++++|.+. .++++||++|+..++.++ +.+||+|+++.+.|++..
T Consensus 9 ~~~~~~~v~~~~~~~~~~~--g~~~~~le~~la~~~g~~~---~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~ 83 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDFLTQ--GPTVPAFEEALAEYVGAKY---AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA 83 (380)
T ss_pred CHHHHHHHHHHHhcCCccC--ChhHHHHHHHHHHHHCCCe---EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH
Confidence 344455555433221 122 3557899999999999864 355578999999999887 789999999999876643
Q ss_pred HHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..++..|++++.++.+. ++.+|++++++++++...+++++|++++ ++|...|+++|.++|++ +|++||+|++
T Consensus 84 --~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~--~~~~lI~D~a 156 (380)
T TIGR03588 84 --NCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKK--HGLKIIEDAS 156 (380)
T ss_pred --HHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHH--cCCEEEEECC
Confidence 55678899999999864 5678999999999842113578888654 68999999999999999 9999999999
Q ss_pred eccCceeeccccccc----eEEEecCC--CcccCCCcceeeeeCHHHHHHhccCCCCceeechH------HHHHHhhcCC
Q 017726 178 SSICAIDFRMDEWGI----DVALTGSQ--KALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK------DYIKFYNLGT 245 (367)
Q Consensus 178 ~~~~~~~~~~~~~~~----d~~~~s~~--K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 245 (367)
|+++.. ++....+. |+.++|+| |++.++.|..++..++++.+++......+...+.. .....++.+.
T Consensus 157 ~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 235 (380)
T TIGR03588 157 HALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQE 235 (380)
T ss_pred CcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeec
Confidence 998865 44444455 99999977 99976665334445677777665432211111000 0000111110
Q ss_pred ccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCC-CccCCCceEEEEcC--CCCCHHH
Q 017726 246 FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK-EEWFSDTVTAVIVP--SHINSSE 321 (367)
Q Consensus 246 ~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 321 (367)
.+ .+ ..+..+.+++...+-..++++.++.+++++++.+.|+++ ++.+..+. .....+.+..+.++ .+.+.++
T Consensus 236 --~g-~n-~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~ 311 (380)
T TIGR03588 236 --LG-FN-YRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKE 311 (380)
T ss_pred --cc-cc-cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHH
Confidence 00 00 011223444443333346788889999999999999987 45544321 11122334444443 2357889
Q ss_pred HHHHHHhhCCeEEccCCCCCC---------------------CcEEEEeecCCCCHHHH
Q 017726 322 IVRRAWQRYNLSLGLGLNKVA---------------------GKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~~~~~---------------------~~~iRi~~~~~~~~~~~ 359 (367)
+.+.|.+ .||.++..+.+.. ...+++.++...+++|+
T Consensus 312 l~~~L~~-~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv 369 (380)
T TIGR03588 312 VFEALRA-AGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQ 369 (380)
T ss_pred HHHHHHH-CCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHH
Confidence 9999965 4998875543210 14588877776665543
No 206
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=7.2e-24 Score=192.83 Aligned_cols=282 Identities=17% Similarity=0.112 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+ .+++++||++|+..++.+++.+||+|+++.+.|.+.. +...+...++++..++.
T Consensus 51 p~~~~le~~lA~l~g~~---~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~---- 123 (382)
T TIGR02080 51 PTRDLLQQALAELEGGA---GAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ---- 123 (382)
T ss_pred chHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC----
Confidence 55779999999999842 4889999999999999999999999999999877543 33444555677776642
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|+++++++++ +++|+|++++|+||||.+.|+++|.++|++ +|+++++|+++..+....+. ..++|++++|+
T Consensus 124 -~d~~~l~~ai~----~~tklV~l~~p~NPtG~~~dl~~I~~la~~--~g~~vvvD~a~~~~~~~~pl-~~gaDivv~S~ 195 (382)
T TIGR02080 124 -GDEQALRAALA----QKPKLVLIETPSNPLLRVVDIAKICHLAKA--VGAVVVVDNTFLSPALQNPL-ALGADLVLHSC 195 (382)
T ss_pred -CCHHHHHHhcC----cCceEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hhCCCEEEeec
Confidence 37899999997 467999999999999999999999999999 99999999999765432222 34789999999
Q ss_pred CCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++. ++++++++..... ..|. +.+......+...++ -+..+++
T Consensus 196 sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~--------------~~g~----~~sp~~a~l~lr~l~-----tl~~R~~ 252 (382)
T TIGR02080 196 TKYLNGHSDVIAGAVIAKDPQVAEELAWWAN--------------NLGV----TGGAFDSYLTLRGLR-----TLVARMR 252 (382)
T ss_pred ceeccCCCCceeEEEEeCCHHHHHHHHHHHH--------------ccCC----CCCHHHHHHHHcccc-----hHHHHHH
Confidence 999987766 477766 5666665543210 1121 233322111211222 2556677
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCCceEEEEcCCCCC-HHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHIN-SSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~~-~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+..+++..+.+.|++. .+. +.-| .+. ...+.+++|.+..+.. ..+|++.|. -.++.+.-|- .
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~s 331 (382)
T TIGR02080 253 LQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLS-LFTLAESLGGVES 331 (382)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCC-cceEeccCCCCcc
Confidence 8889999999999986 332 2222 110 1245688999842221 234555442 2233332221 1
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..++.||+| .|-++.+|+..++
T Consensus 332 l~~~p~~~~~~~~~~~~~~~~gi~~~liRls-vGlE~~~dl~~dl 375 (382)
T TIGR02080 332 LIAHPATMTHAAMGPEARAEAGISDTLLRLS-VGLEDADDLIADL 375 (382)
T ss_pred eeECCCccCcccCCHHHHHhcCCCcCeEEEE-eccCCHHHHHHHH
Confidence 0 113469998 5777777776554
No 207
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.93 E-value=1.2e-23 Score=191.93 Aligned_cols=283 Identities=16% Similarity=0.138 Sum_probs=193.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. +++++||+.|+..++.+++.+||+|+++.+.|.+.. +...++..|+++..++.+
T Consensus 53 ~p~~~~le~~la~l~g~~~---~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-- 127 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAER---AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-- 127 (380)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC--
Confidence 3557899999999999853 577899999999999888999999999887665543 445677789999988764
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+...-+ ...++|+++.|
T Consensus 128 ---d~~~l~~~i~----~~tklV~le~p~np~g~~~dl~~I~~la~~--~gi~livD~a~~~~~~~~p-l~~g~Divv~S 197 (380)
T TIGR01325 128 ---DLNAWEAAVK----PNTKLVFVETPSNPLGELVDIAALAELAHA--IGALLVVDNVFATPVLQQP-LKLGADVVVYS 197 (380)
T ss_pred ---CHHHHHHhcC----CCceEEEEECCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccCCc-hhhCCCEEEee
Confidence 7899998887 467999999999999999999999999999 9999999999875432222 24578999999
Q ss_pred CCCcccCCC-c-ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPT-G-MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~-g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+. . .|+++.++++++++..... ..|. +.+....+.+...++. +..+.+
T Consensus 198 ~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~--------------~~g~----~~~p~~a~~~l~~l~t-----l~~r~~ 254 (380)
T TIGR01325 198 ATKHIDGQGRVMGGVIAGSEELMAEVAVYLR--------------HTGP----AMSPFNAWVLLKGLET-----LSLRMQ 254 (380)
T ss_pred ccceecCCCCeEEEEEEeCHHHHHHHHHHHH--------------hhCC----CCCHHHHHHHHhccCc-----HHHHHH
Confidence 999997653 2 3888889888776653210 0121 2222211111112222 556778
Q ss_pred HHHHHHHHHHHHHHHc-CCcc-----ccCCCc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 277 RHRRLGKATRLAVEAW-GLKN-----CTQKEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~-----~~~~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
+..+++..+.+.|++. ++.. ..+.+. ...+.++.|.+. +. ....|.+.|+ -..+.+.-| ..
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~~~l~-~~~~~~s~G~~~s 332 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVLDAVE-LVSITNNLGDAKS 332 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHHHcCC-cceEcccCCCCCe
Confidence 8889999999999987 4432 111111 124568889984 32 1334545442 222222211 10
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.+|+| .|-++.+|+..++-
T Consensus 333 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 377 (380)
T TIGR01325 333 TITHPATTTHGRMQPEERAAAGIGDGLVRLS-VGLEDVDDLIADLK 377 (380)
T ss_pred eeeCCCccCcccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0 113569998 57788888877654
No 208
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.4e-23 Score=190.26 Aligned_cols=284 Identities=14% Similarity=0.166 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|.+. .++++||++|+..++.+++.+||+|+++.+.|.+.. +...++..|+++..++.
T Consensus 63 ~p~~~~le~~lA~l~g~~~---~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~--- 136 (398)
T PRK08249 63 NPTVQAFEEKVRILEGAEA---ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET--- 136 (398)
T ss_pred ChHHHHHHHHHHHHhCCCe---EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC---
Confidence 4667899999999999654 466688899999999888999999999999887753 44456678888877764
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
.|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|
T Consensus 137 --~d~e~l~~~i~----~~tklV~ie~p~NPtg~v~dl~~I~~la~~--~gi~livD~t~a~~~~~~~l-~~~~Divv~S 207 (398)
T PRK08249 137 --GDHEQIEAEIA----KGCDLLYLETPTNPTLKIVDIERLAAAAKK--VGALVVVDNTFATPINQNPL-ALGADLVIHS 207 (398)
T ss_pred --CCHHHHHHhcC----CCCeEEEEECCCCCCCccCCHHHHHHHHHH--cCCEEEEECCcCccccCCch-hhCCCEEecc
Confidence 48999999997 467999999999999999999999999999 99999999998854432222 3578999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.. .|+++.++++++++..... . .+. ..+....+.+...++. +..+.+
T Consensus 208 ~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~-------------~-~g~----~~s~~~a~l~l~~l~t-----L~~R~~ 264 (398)
T PRK08249 208 ATKFLSGHADALGGVVCGSKELMEQVYHYRE-------------I-NGA----TMDPMSAYLILRGMKT-----LKLRVR 264 (398)
T ss_pred CceecCCCCCceEEEEECCHHHHHHHHHHHH-------------h-cCC----CCCHHHHHHHHhCcch-----HHHHHH
Confidence 9999975432 3788888888777653210 0 121 2333222222222222 456677
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
+..+++..+.+.|++. .+. +.-|. +. ...+.++.|.+..+. ...+|++.|+ -..+.+.-| ..
T Consensus 265 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~-l~~~~~s~G~~~s 343 (398)
T PRK08249 265 QQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLR-YAHRAANLGAVET 343 (398)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCC-cceEccCCCCCCc
Confidence 8889999999999986 332 22221 10 123568888883221 1234444442 222222211 10
Q ss_pred ---------------------CCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ---------------------KVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ---------------------~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
...++.+|+| .|-++.+|+..++-
T Consensus 344 l~~~~~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 388 (398)
T PRK08249 344 IYGPARTTSHVENTLEERAALGIPEGLVRIS-VGIEDTEDLIADLE 388 (398)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0113569998 57777777776653
No 209
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=1.1e-23 Score=191.70 Aligned_cols=214 Identities=19% Similarity=0.178 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.+++++|.+. .++++||+.|+..++.+++.+||+|++..+.|.+.. +...++..|+++..++.+
T Consensus 39 ~p~~~~le~~la~l~g~~~---a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-- 113 (369)
T cd00614 39 NPTVDALEKKLAALEGGEA---ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD-- 113 (369)
T ss_pred ChhHHHHHHHHHHHHCCCC---EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC--
Confidence 4678899999999999653 567788999999999999999999999998887764 334566789988888764
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|+++.|
T Consensus 114 ---d~~~l~~~i~----~~~~~v~~e~~~np~g~~~dl~~i~~la~~--~g~~livD~t~~~~~~~-~~~~~g~Divv~S 183 (369)
T cd00614 114 ---DPEALEAAIK----PETKLVYVESPTNPTLKVVDIEAIAELAHE--HGALLVVDNTFATPYLQ-RPLELGADIVVHS 183 (369)
T ss_pred ---CHHHHHHhcC----CCCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcchhcC-ChhhhCCcEEEec
Confidence 5899999987 467999999999999999999999999999 99999999998876432 2224578999999
Q ss_pred CCCcccCCCc--ceeeeeCH-HHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+++|+.. .|++++++ ++++++..... . .|. +++.... ..++..+ +.+..++
T Consensus 184 ~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~-------------~-~g~----~~~p~~a---~~~l~~l--~tl~~r~ 240 (369)
T cd00614 184 ATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL-------------A-LGT----ILSPFDA---WLLLRGL--KTLPLRM 240 (369)
T ss_pred cceeccCCCCceEEEEEeCcHHHHHHHHHHHH-------------h-hCC----CCCHHHH---HHHHcCC--CCHHHHH
Confidence 9999976532 58898887 77776653210 0 121 2333222 2222222 2256678
Q ss_pred HHHHHHHHHHHHHHHHc
Q 017726 276 ERHRRLGKATRLAVEAW 292 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~ 292 (367)
++..+++.++.+.|++.
T Consensus 241 ~~~~~na~~la~~L~~~ 257 (369)
T cd00614 241 ERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88899999999999987
No 210
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=9.8e-24 Score=192.83 Aligned_cols=280 Identities=15% Similarity=0.134 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. .++ +++|+.++..++. ++.+||+|+++++.|.+.. +...++..|++++.++..
T Consensus 53 ~p~~~~le~~lA~l~g~~~--~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 126 (390)
T PRK08064 53 NPTREALEDIIAELEGGTK--GFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT-- 126 (390)
T ss_pred ChhHHHHHHHHHHHhCCCC--eEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC--
Confidence 4667899999999999874 344 4777889988775 6789999999999887653 556677889999999864
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||||.+.|+++|.++|++ +|+++++|++++.+....+. ..++|+++.|
T Consensus 127 ---d~~~l~~~l~----~~tklV~l~~p~NptG~~~dl~~I~~la~~--~g~~vvvD~a~~~~~~~~~~-~~g~Divv~S 196 (390)
T PRK08064 127 ---NLEEVAQNIK----PNTKLFYVETPSNPLLKVTDIRGVVKLAKA--IGCLTFVDNTFLTPLLQKPL-DLGADVVLHS 196 (390)
T ss_pred ---CHHHHHHhcC----CCceEEEEECCCCCCcEeccHHHHHHHHHH--cCCEEEEECCCCcccccCch-hhCCcEEEee
Confidence 7899999887 467999999999999999999999999999 99999999998765432232 4579999999
Q ss_pred CCCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+++|+.| .|+++++ +++++++..... ..|. ..+.. .+++....-.-+..+.
T Consensus 197 ~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--------------~~g~----~~~~~-----~a~l~~~gl~tl~~R~ 253 (390)
T PRK08064 197 ATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--------------SFGA----VLGVQ-----DCWLVLRGLKTLHVRL 253 (390)
T ss_pred cceeccCCccceeEEEEeCCHHHHHHHHHHHH--------------hcCC----CCCHH-----HHHHHHcccCcHHHHH
Confidence 9999988876 3777765 567766653211 0111 12221 1112111111155777
Q ss_pred HHHHHHHHHHHHHHHHc-CC-ccccCC----C--------ccCCCceEEEEcCCCCCHHHHHHHHHhhCCe---EEccCC
Q 017726 276 ERHRRLGKATRLAVEAW-GL-KNCTQK----E--------EWFSDTVTAVIVPSHINSSEIVRRAWQRYNL---SLGLGL 338 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~-~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv---~v~~g~ 338 (367)
++..+++..+.+.|++. .+ .++-|. + ....+.+++|.+ ++ .+++.+ +.+..++ .++.|-
T Consensus 254 ~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~-~~--~~~~~~-f~~~l~l~~~~~s~G~ 329 (390)
T PRK08064 254 EHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTL-QS--EEAVRQ-FVSHVKLPVFAVSLGA 329 (390)
T ss_pred HHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEE-CC--HHHHHH-HHHhCCcceEcccCCC
Confidence 88889999999999886 32 222221 1 012445888988 33 234433 3345565 444441
Q ss_pred ------------C-----------CCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 339 ------------N-----------KVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 339 ------------~-----------~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ...++.+|+| .|-.+.+|++.++.
T Consensus 330 ~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~S-vGle~~~dli~dl~ 377 (390)
T PRK08064 330 VESILSYPAKMSHAAMPKEERDERGITDGLLRLS-VGLENVDDLIADFE 377 (390)
T ss_pred CcceeECCcccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0 0123569998 46666666665543
No 211
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=1.5e-23 Score=190.59 Aligned_cols=284 Identities=14% Similarity=0.122 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchH-H-HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSL-L-WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~-~-~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++.|.+. ++++ +||++|+..++.+++++||+|+++.+.+... . +...++..|+++..++.+
T Consensus 44 ~p~~~~L~~~lA~l~g~~~--~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~-- 118 (376)
T PRK06460 44 NPTVLELTKKIVELENAEM--GVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG-- 118 (376)
T ss_pred CccHHHHHHHHHHHhCCCc--EEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC--
Confidence 4667899999999999865 3555 6678999999999999999999987755332 2 446678889998888754
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+.+.++++++ +++|+|++++|+||||.+.|+++|.++|++ +|+++++|++++.+.. ......++|+++.|
T Consensus 119 ---~~~~l~~~~~----~~tklV~l~sp~NPtG~v~d~~~I~~la~~--~g~~vivDea~~~~~~-~~~l~~~~divv~S 188 (376)
T PRK06460 119 ---SDNIIEKAKS----KRYDVVFVENITNPLLRVVDITELSKVCKE--NGSILIVDATFSTPIN-QKPLELGADIVVHS 188 (376)
T ss_pred ---CHHHHHHhcC----CCceEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCcCcccc-CChhhcCCCEEEee
Confidence 2344444444 477999999999999999999999999999 9999999999875422 11123468999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.+ .|+++.++++++++..... . .+. +.+......+...+++ ++.+++
T Consensus 189 ~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~------------~--~g~----~~~~~~a~~~l~~~~~-----l~~r~~ 245 (376)
T PRK06460 189 ASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR------------T--LGT----SLDPHAAYLTLRGIKT-----LKIRMD 245 (376)
T ss_pred cceeccCCCCceEEEEecCHHHHHHHHHHHH------------h--cCC----CCCHHHHHHHHhchhh-----HHHHHH
Confidence 9999976543 5899999998877753210 0 011 1222111111112222 567788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccC----CCc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-CC-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQ----KEE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG-LN- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~----~~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g-~~- 339 (367)
+..++++++.+.|++. .+. +.-| .+. ...+.+++|.+..+. ...++++.|+ -..+.+.-| ..
T Consensus 246 ~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~-~~~~~~s~Gg~~s 324 (376)
T PRK06460 246 VINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLK-LIIPAQTLGGVNS 324 (376)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCC-cceeccCCCCCce
Confidence 8999999999999986 332 2112 110 124568889883221 2334444442 111121111 10
Q ss_pred ---------------------CCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ---------------------KVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ---------------------~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
...++.||+| .|-++.+|+..++.
T Consensus 325 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 369 (376)
T PRK06460 325 VISHPATMSHRTLSLEERKIVGITDSLLRLS-VGIEDVNDLIEDLD 369 (376)
T ss_pred EEeCccccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0123569998 57778887776653
No 212
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=2.5e-23 Score=190.10 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.+++++|.+. .++++||+.|+..++.+++.+||+|+++.+.|.+.. +...+...|+++..++.+
T Consensus 59 p~~~~le~~lA~l~g~~~---av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~--- 132 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTEA---AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA--- 132 (391)
T ss_pred chHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC---
Confidence 557899999999999865 467788899999999888999999999988665543 445567789999888765
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+...-+. ..++|++++|+
T Consensus 133 --d~e~l~~~i~----~~tklV~le~p~Np~G~v~dl~~I~~la~~--~gi~livD~a~a~~~~~~~~-~~g~Divv~S~ 203 (391)
T TIGR01328 133 --IPEEVKAHIK----DNTKIVYFETPANPTMKLIDMERVCRDAHS--QGVKVIVDNTFATPMLTNPV-ALGVDVVVHSA 203 (391)
T ss_pred --CHHHHHHhhc----cCCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCchhccCCch-hcCCCEEEccc
Confidence 7899999987 467999999999999999999999999999 99999999999865433222 34799999999
Q ss_pred CCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIER 277 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~ 277 (367)
+|+++|+.+ .|+++.++++++++..... +...|. .++... ...++..+ ..+..++++
T Consensus 204 sK~lgg~g~~~gG~v~~~~~li~~l~~~~~------------~~~~g~----~l~~~~---a~l~l~~L--~tl~~r~~~ 262 (391)
T TIGR01328 204 TKYIGGHGDVVAGLICGKAELLQQIRMVGI------------KDMTGS----VISPFD---AWLILRGL--KTLNIRMKR 262 (391)
T ss_pred cccccCCCCceEEEEEcCHHHHHHHHHHHH------------HhCCCC----CCCcHH---HHHHHhCc--CcHHHHHHH
Confidence 999976543 4888899998877763210 000011 122211 11122211 225667888
Q ss_pred HHHHHHHHHHHHHHc-CC
Q 017726 278 HRRLGKATRLAVEAW-GL 294 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~-g~ 294 (367)
..+++..+.+.|++. ++
T Consensus 263 ~~~na~~la~~L~~~p~v 280 (391)
T TIGR01328 263 HSENAMKVAEYLKSHPAV 280 (391)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 899999999999987 54
No 213
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=7.3e-23 Score=184.84 Aligned_cols=285 Identities=12% Similarity=0.136 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+....+++.++++-|.+. .++++||+.|+..++.+++.+||+|+++...|.+.. +...++..|+++..++..
T Consensus 61 nPt~~~le~~la~LEg~~~---a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~-- 135 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAG---CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL-- 135 (395)
T ss_pred ChhHHHHHHHHHHHhCCCe---EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC--
Confidence 3557789999999887554 466688999999999899999999999988776654 335567789999998743
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|.++++++++ ++||+|++.++.||+|.+.|+++|+++||++.+|+++++|.+++.+.. +++.++|+|++++|
T Consensus 136 ---d~~~l~~~l~----~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S 207 (395)
T PRK08114 136 ---IGADIAKLIQ----PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQA 207 (395)
T ss_pred ---CHHHHHHhcC----CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEc
Confidence 6899999997 467999999999999999999999999999323599999999988766 78888899999999
Q ss_pred CCCcccCCC--cceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPT--GMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
.+||++|+. ++|+++.+++..+++... +...|. ..+....+.+...++ -+.-+.+
T Consensus 208 ~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--------------~~~~G~----~~~p~~a~l~~rgl~-----TL~lR~~ 264 (395)
T PRK08114 208 GTKYLVGHSDAMIGTAVANARCWEQLREN--------------SYLMGQ----MVDADTAYMTSRGLR-----TLGVRLR 264 (395)
T ss_pred CcccccCCCcceeEEEEcCHHHHHHHHHH--------------HHhccC----CCCHHHHHHHHcCCC-----cHHHHHH
Confidence 999999885 458888887765544321 001132 233321111111111 1566788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCCCH---HHHHHHHHhhCCeEEccC-C
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHINS---SEIVRRAWQRYNLSLGLG-L 338 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~~~---~~l~~~L~~~~gv~v~~g-~ 338 (367)
+..+++..+.+.|++. .+. ++-|. +. ...+.++.|.+..+.+. ..+++.|+ -..+.+.-| .
T Consensus 265 ~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~-l~~~a~SlGg~ 343 (395)
T PRK08114 265 QHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFS-LFSMAYSWGGF 343 (395)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCC-cceeecccCCc
Confidence 9999999999999987 332 22221 10 12466888998421122 23444442 222232222 1
Q ss_pred C---C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 339 N---K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 339 ~---~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
. . ..++.||+| .|-++.+|+..++
T Consensus 344 ~SLi~~~~~~~~~~~~~~~~~~~~~~liRlS-vGlEd~~DLi~Dl 387 (395)
T PRK08114 344 ESLILANQPEEIAAIRPAGEVDFTGTLIRLH-IGLEDVDDLIADL 387 (395)
T ss_pred cceeccCCchhhhccCChhHhcCCCCeEEEE-eccCCHHHHHHHH
Confidence 1 0 123569998 5777777776654
No 214
>PLN02397 aspartate transaminase
Probab=99.93 E-value=6e-23 Score=190.11 Aligned_cols=307 Identities=17% Similarity=0.093 Sum_probs=192.5
Q ss_pred HHHHHHHccCC--CCCCCCcHHHHHHHHHHHHHHHhcCCC-----CceE--EecCChhHH--HHHHHHccCCCCCeEEEE
Q 017726 22 DQVIRAMNRNN--EDYRSPAVPALTKTLLEDIKKIFKTTS-----GTPF--LIPTTGTGA--WESALTNTLSPGDRIISF 90 (367)
Q Consensus 22 ~~v~~a~~~~~--~~~~~~~~~~~~~~~~~~la~~~~~~~-----~~~v--~~~~ggt~a--l~~~~~~~~~~gd~vl~~ 90 (367)
+.+.+++.+.. .....|....+..++|+.+++++.... ++.+ ..+.+|+++ +...+..++.|||+|+++
T Consensus 69 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~ 148 (423)
T PLN02397 69 NVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIP 148 (423)
T ss_pred hHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEe
Confidence 45566543321 112245556778899999999874321 1223 113344444 444444555799999999
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeC-C-CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHh
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVES-D-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDE 165 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~ 165 (367)
+|.|+.+. ..++..|.+++.+++ + .++.+|++.+++.+.+.+ ++++++++++||||||.+++ +++|.++|++
T Consensus 149 ~P~y~~y~--~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~-~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~ 225 (423)
T PLN02397 149 NPTWGNHH--NIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP-DGSFVLLHACAHNPTGVDPTPEQWEQISDLIKS 225 (423)
T ss_pred CCCchhHH--HHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Confidence 99776643 567888999999987 3 346789999988887542 46789999999999999997 4557777888
Q ss_pred cCCCcEEEEeeeeccCcee------ec---cccc-cceEEEecCCCcccCCCc--ceeee--e-CHHHHHHhccCCCCce
Q 017726 166 YRHPALFLVDGVSSICAID------FR---MDEW-GIDVALTGSQKALSLPTG--MGIVC--A-SPKALEASKTAKSVRV 230 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~------~~---~~~~-~~d~~~~s~~K~~~g~~g--~g~~~--~-~~~~~~~~~~~~~~~~ 230 (367)
+|++||+|++|...... .. .... ...+++.|+||.++ ++| +|+++ . +++.++++....
T Consensus 226 --~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~-~~G~RvG~~v~~~~~~~~~~~~~~~~---- 298 (423)
T PLN02397 226 --KNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG-LYGERVGALSVVCKSADVAVRVKSQL---- 298 (423)
T ss_pred --CCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCC-CccccceEEEEEeCCHHHHHHHHHHH----
Confidence 99999999998754321 01 1111 23588889999995 444 69984 3 555544332110
Q ss_pred eechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHH--H-Hh--ChHHHHHHHHHHHHHHHHHHHHcC----CccccCCC
Q 017726 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI--F-EE--GLENVIERHRRLGKATRLAVEAWG----LKNCTQKE 301 (367)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~--~-~~--g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~ 301 (367)
....... ...++.....+...++..- . ++ .++++++++.++++.+.+.|+++| +.+..|
T Consensus 299 --------~~~~~~~--~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p-- 366 (423)
T PLN02397 299 --------KLIARPM--YSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITK-- 366 (423)
T ss_pred --------HHHHhcc--cCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccC--
Confidence 0000010 1123333323333333221 0 11 156778899999999999999986 555555
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
.+++++|+++ + ++++++|.+++||.+.+ ++ ||++.+ ..+..+...+.|+
T Consensus 367 --~gg~fl~~~l----~-~~~~~~Ll~~~~V~v~~------~~--Ri~~~~~~~~~i~~~~~~i~ 416 (423)
T PLN02397 367 --QIGMFSFTGL----N-KEQVDRMTKEYHIYMTR------DG--RISMAGLSSKNVPYLADAIH 416 (423)
T ss_pred --CceEEEecCC----C-HHHHHHHHHhCCEEECC------CC--eEEEeeCCHHHHHHHHHHHH
Confidence 5666666655 2 46999999999999862 22 998764 3334444444443
No 215
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=3.6e-23 Score=188.02 Aligned_cols=295 Identities=14% Similarity=0.138 Sum_probs=191.5
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHH
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (367)
..++.++++.+.....+.........++++.+++++|.+. +++++|||+|+.+++.++ +.|||+|+++.+.|.+..
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~~~---~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~ 85 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGTKK---ALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA 85 (376)
T ss_pred CCHHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHH
Confidence 4555566776644333222234667899999999988753 889999999999988876 899999999999877653
Q ss_pred HHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+...|++++.++++.+ +.+|+++++++++ +++|+|+ |+|++|...|+++|.++|++ +|++||+|++
T Consensus 86 --~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~----~~tk~Ii---p~~~~G~~~d~~~I~~la~~--~~i~vIeDaa 154 (376)
T TIGR02379 86 --NAFVLRGAKIVFVDIRPDTMNIDETLIESAIT----HRTKAIV---PVHYAGVACDMDTIMALANK--HQLFVIEDAA 154 (376)
T ss_pred --HHHHHcCCEEEEEecCCCcCCCCHHHHHHhcC----cCceEEE---EeCCCCCccCHHHHHHHHHH--CCCEEEEECc
Confidence 445678999999999866 5789999999987 4679886 45679999999999999999 9999999999
Q ss_pred eccCceeecccccc--ceEEEecC--CCcccC-CCcceeee-eCHHHHHHhccCCCCceeec-hHH-HHHHh---hcCCc
Q 017726 178 SSICAIDFRMDEWG--IDVALTGS--QKALSL-PTGMGIVC-ASPKALEASKTAKSVRVFFD-WKD-YIKFY---NLGTF 246 (367)
Q Consensus 178 ~~~~~~~~~~~~~~--~d~~~~s~--~K~~~g-~~g~g~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~---~~~~~ 246 (367)
|+.++. ++....+ .|+.++|+ .|.+.+ +.| |+++ .++++.+++...+..+...+ ... ....+ ..|.
T Consensus 155 ~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~g-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~- 231 (376)
T TIGR02379 155 QGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEG-GALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGS- 231 (376)
T ss_pred cccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCc-eEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecc-
Confidence 998763 2222222 25666664 465643 355 6555 45888887775543211100 000 00000 0121
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc---C-Ccccc-CCCccCCCceEEEEcCCCCCHHH
Q 017726 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW---G-LKNCT-QKEEWFSDTVTAVIVPSHINSSE 321 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 321 (367)
.+-++- +.+++...+-..+++..++.+++++...+.|+++ + ..+.. +........++++.++...+.++
T Consensus 232 -n~~~~~-----~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~r~~ 305 (376)
T TIGR02379 232 -SYLPSE-----LQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDEDDRNE 305 (376)
T ss_pred -cCCccH-----HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcCCHHH
Confidence 111222 2233333322336667777788888888888764 1 12211 11222233456677754456789
Q ss_pred HHHHHHhhCCeEEccCC
Q 017726 322 IVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~ 338 (367)
+.+.|.++ ||.++.++
T Consensus 306 l~~~L~~~-gI~~~~~~ 321 (376)
T TIGR02379 306 LIKYLKEQ-EIMAVFHY 321 (376)
T ss_pred HHHHHHHC-CCCccccC
Confidence 99999755 99887543
No 216
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=6.7e-23 Score=186.68 Aligned_cols=214 Identities=19% Similarity=0.133 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~ 119 (367)
.....++++.+++++|.+. +++++||+.|+..++.+++.+||+|+++.+.|.+.. +...++..|+++..+.
T Consensus 52 np~~~~lE~~lA~l~g~~~---~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~----- 123 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVD---ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY----- 123 (385)
T ss_pred CccHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-----
Confidence 3567789999999999653 566789999999999888999999999999887764 2233355688777653
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
+|++++++++++ .++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|++++|+
T Consensus 124 -~d~~~l~~~i~~---~~tklV~ie~p~NPtG~v~dl~~I~~la~~--~gi~livD~t~a~~~~~-~~l~~GaDivv~S~ 196 (385)
T PRK08574 124 -PSTEDIIEAIKE---GRTKLVFIETMTNPTLKVIDVPEVAKAAKE--LGAILVVDNTFATPLLY-RPLRHGADFVVHSL 196 (385)
T ss_pred -CCHHHHHHhcCc---cCceEEEEECCCCCCCEecCHHHHHHHHHH--cCCEEEEECCCCccccC-ChhhhCCcEEEeeC
Confidence 358899999874 267999999999999999999999999999 99999999999765432 22245789999999
Q ss_pred CCcccCCCc--ceeee-eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.. .|+++ .++++.+++.... +. .|. .++....+.+...++ -+..+.+
T Consensus 197 sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-------------~~-~g~----~~~p~~a~l~l~~l~-----tL~~R~~ 253 (385)
T PRK08574 197 TKYIAGHNDVVGGVAVAWSGEFLEELWEWR-------------RR-LGT----IMQPFEAYLVLRGLK-----TLEVRFE 253 (385)
T ss_pred ceeecCCCCceeEEEEECcHHHHHHHHHHH-------------Hh-cCC----CCCHHHHHHHHcccC-----cHHHHHH
Confidence 999987643 26344 4677666654221 00 121 233221111111222 2566778
Q ss_pred HHHHHHHHHHHHHHHc
Q 017726 277 RHRRLGKATRLAVEAW 292 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (367)
+..+++..+.+.|++.
T Consensus 254 ~~~~na~~la~~L~~~ 269 (385)
T PRK08574 254 RQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8888999999999886
No 217
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=4.4e-23 Score=188.40 Aligned_cols=283 Identities=15% Similarity=0.121 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. .+++ +||++|+..++.+++++||+|+++.+.|.+.. +...+...|+++..++.
T Consensus 61 p~~~~Le~~lA~~~g~~~--~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~---- 133 (388)
T PRK07811 61 PTRTALEEQLAALEGGAY--GRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL---- 133 (388)
T ss_pred ccHHHHHHHHHHHhCCCc--eEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC----
Confidence 567899999999999876 3444 67899999999999999999999999777543 33334446787777765
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++|+|++++.+....+. ..++|++++|+
T Consensus 134 -~d~e~l~~~i~----~~tklV~ie~p~NPtg~~~dl~~I~~la~~--~gi~lIvD~a~a~~~~~~p~-~~gaDivv~S~ 205 (388)
T PRK07811 134 -SDLDAVRAAIT----PRTKLIWVETPTNPLLSITDIAALAELAHD--AGAKVVVDNTFASPYLQQPL-ALGADVVVHST 205 (388)
T ss_pred -CCHHHHHHhcC----cCCeEEEEECCCCCcceecCHHHHHHHHHH--cCCEEEEECCCCccccCCch-hhCCcEEEecC
Confidence 38999999987 467999999999999999999999999999 99999999999876433232 35789999999
Q ss_pred CCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++++ +++.+++.... ...|. ..+... ...++..+ ..+..+.+
T Consensus 206 sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~--------------~~~g~----~~s~~~---a~l~~~~L--~tl~~R~~ 262 (388)
T PRK07811 206 TKYIGGHSDVVGGALVTNDEELDEAFAFLQ--------------NGAGA----VPGPFD---AYLTLRGL--KTLAVRMD 262 (388)
T ss_pred ceeecCCCCcEEEEEEECCHHHHHHHHHHH--------------HhcCC----CCCHHH---HHHHHhcc--CcHHHHHH
Confidence 999987654 4777765 55555443210 00111 122211 11112211 12567778
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+..+++..+.+.|++. ++. +.-|. +. ...+.+++|.+..+. ....|.+.|. -..+.+.-|- .
T Consensus 263 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~s 341 (388)
T PRK07811 263 RHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTK-VFTLAESLGGVES 341 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCC-cceeeccCCCCcc
Confidence 8899999999999987 543 22221 10 123568899983221 1233444442 1122222121 0
Q ss_pred ----C--------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K--------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~--------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.||+| .|-++.+|+..++.
T Consensus 342 l~~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 383 (388)
T PRK07811 342 LIEHPSAMTHASTAGSQLEVPDDLVRLS-VGIEDVADLLADLE 383 (388)
T ss_pred eEeCCcccCcccCCHhhcCCCCCEEEEE-eCCCCHHHHHHHHH
Confidence 0 113569998 58778888876654
No 218
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.93 E-value=1.2e-22 Score=185.99 Aligned_cols=235 Identities=14% Similarity=0.106 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. .++++||+.|+..++.+++.+||+|+++...|.+.. +...++..|+++..++..
T Consensus 70 p~~~~le~~lA~l~g~~~---al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~--- 143 (403)
T PRK07810 70 PTVSMFEERLRLIEGAEA---CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE--- 143 (403)
T ss_pred chHHHHHHHHHHHhCCCc---EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC---
Confidence 447799999999999663 577799999999999888999999999876554432 445677789999999753
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+...-+. ..++|++++|+
T Consensus 144 --d~~~l~~ai~----~~tklV~~esp~Nptg~v~dl~~I~~la~~--~g~~vivD~a~a~~~~~~~~-~~gaDivv~S~ 214 (403)
T PRK07810 144 --DLSQWEEALS----VPTQAVFFETPSNPMQSLVDIAAVSELAHA--AGAKVVLDNVFATPLLQRGL-PLGADVVVYSG 214 (403)
T ss_pred --CHHHHHHhcC----cCceEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCCccccCChh-hcCCcEEEccC
Confidence 8999999998 467999999999999999999999999999 99999999999866542222 45799999999
Q ss_pred CCcccCCCc--ceeeeeCHHHHHH-hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPKALEA-SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|... .|+++++++.+.. +.... + ..|. .++....+.+..+++. +..+.+
T Consensus 215 tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~-------------~-~~g~----~~s~~~a~l~l~~L~t-----l~~R~~ 271 (403)
T PRK07810 215 TKHIDGQGRVLGGAILGDREYIDGPVQKLM-------------R-HTGP----ALSAFNAWVLLKGLET-----LALRVR 271 (403)
T ss_pred CceecCCcCceeEEEEeChHHHHHHHHHHH-------------H-HhCC----CCCHHHHHHHHhccCc-----HHHHHH
Confidence 999975432 4888888876542 32110 0 1121 2333222222222222 677788
Q ss_pred HHHHHHHHHHHHHHHc-CCcccc-CC---Cc---------cCCCceEEEEcC
Q 017726 277 RHRRLGKATRLAVEAW-GLKNCT-QK---EE---------WFSDTVTAVIVP 314 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~-~~---~~---------~~~~~~~~~~~~ 314 (367)
+..+++..+.+.|++. ++..+. |. .+ ...+.+++|.+.
T Consensus 272 ~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 272 HSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 8999999999999987 543222 21 10 124568889884
No 219
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=6.9e-23 Score=185.25 Aligned_cols=283 Identities=16% Similarity=0.178 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+..+.+++.++.+-+.+. .++++||++|+..++.+++++||+|+++++.|++.. +...++..|+++..++.+
T Consensus 63 nPt~~~Le~~la~le~~~~---~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-- 137 (395)
T PRK05967 63 TPTTDALCKAIDALEGSAG---TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-- 137 (395)
T ss_pred ChHHHHHHHHHHHHhCCCC---EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC--
Confidence 4556788888888876443 355577899999999999999999999999988865 235678899999988643
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+.+.++++++ ++||+|++++|+||++.+.|+++|.++|++ +|+++++|++++.+ ......++|+|+++.|
T Consensus 138 ---~~e~l~~al~----~~TklV~lesPsNP~l~v~dl~~I~~la~~--~g~~vvVD~t~a~p-~~~~pl~~GaDivv~S 207 (395)
T PRK05967 138 ---IGAGIAKLMR----PNTKVVHTEAPGSNTFEMQDIPAIAEAAHR--HGAIVMMDNTWATP-LYFRPLDFGVDISIHA 207 (395)
T ss_pred ---CHHHHHHhcC----cCceEEEEECCCCCCCcHHHHHHHHHHHHH--hCCEEEEECCccCc-eecChhHcCCCEEEEe
Confidence 3578999887 467999999999999999999999999999 99999999999764 3345556799999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
.+|+++|..+ .|+++.+++..+++... +...|. +.+....+.+...++. +.-+.+
T Consensus 208 ~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~--------------~~~~G~----~~~p~da~l~~rgl~T-----l~lR~~ 264 (395)
T PRK05967 208 ATKYPSGHSDILLGTVSANEKCWPQLLEA--------------HGTLGL----CAGPDDTYQILRGLRT-----MGIRLE 264 (395)
T ss_pred cccccCCCCCeeEEEEEcCHHHHHHHHHH--------------HHHcCC----CCCHHHHHHHHcCccc-----HHHHHH
Confidence 9999986544 37777777765554321 001132 2333222222212221 566788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC--C---HHHHHHHHHhhCCeEEccC
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI--N---SSEIVRRAWQRYNLSLGLG 337 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~--~---~~~l~~~L~~~~gv~v~~g 337 (367)
+..+++..+.+.|++. .+. +.-|. +. ...+.+++|.+..+. + ..+|.+.|+ -..+.+.-|
T Consensus 265 ~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~-l~~~~~slG 343 (395)
T PRK05967 265 HHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALE-IFGLGYSWG 343 (395)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCC-cceEccCCC
Confidence 8999999999999986 442 22221 10 123568889884231 1 234444442 222222212
Q ss_pred C-C----------------CCCCcEEEEeecCCCCHHHHHHhh
Q 017726 338 L-N----------------KVAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 338 ~-~----------------~~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
- . ...++.+||| .|-++.+|+..++
T Consensus 344 ~~~sLi~~~~~~~~~~~~~~~~~~liRlS-vGlEd~~dLi~Dl 385 (395)
T PRK05967 344 GYESLALHVKLGDRTVAKAPYAGPVIRLQ-IGLEDVPDLKADL 385 (395)
T ss_pred CcceeeeeCCCChhHhhhccCCCCeEEEE-eccCCHHHHHHHH
Confidence 1 0 0123469998 5777777776654
No 220
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=2e-23 Score=189.60 Aligned_cols=230 Identities=16% Similarity=0.138 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++.|.+. .++++||++|+..++ +++.+||+|+++++.|.+.. +...++..|+++..++..
T Consensus 51 ~pt~~~le~~la~l~g~~~---~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 124 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQ---GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA-- 124 (366)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC--
Confidence 3567899999999999876 366788899998765 57789999999999887653 445567789999988753
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||+|.+.++++|.++|++ +|+++++|++++.+....+. ..++|+++.|
T Consensus 125 ---d~~~l~~~i~----~~tklv~le~P~NP~~~~~dl~~I~~la~~--~g~~lIvD~t~~~~~~~~p~-~~g~di~i~S 194 (366)
T PRK08247 125 ---SLKAIEQAIT----PNTKAIFIETPTNPLMQETDIAAIAKIAKK--HGLLLIVDNTFYTPVLQRPL-EEGADIVIHS 194 (366)
T ss_pred ---CHHHHHHhcc----cCceEEEEECCCCCCCcHHHHHHHHHHHHH--cCCEEEEECCCccccccCch-hcCCcEEEee
Confidence 8899999987 467999999999999999999999999999 99999999998644322222 3478999999
Q ss_pred CCCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+++|+.+ .|+++.+ +++.+++.... ...+. ..+......+..+++ .+..++
T Consensus 195 ~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~--------------~~~g~----~~s~~~a~l~~~~l~-----tl~~r~ 251 (366)
T PRK08247 195 ATKYLGGHNDVLAGLVVAKGQELCERLAYYQ--------------NAAGA----VLSPFDSWLLIRGMK-----TLALRM 251 (366)
T ss_pred cceeccCCCceeeeEEecChHHHHHHHHHHH--------------HhcCC----CCChHHHHHHHhccC-----cHHHHH
Confidence 9999987644 3777776 55655554221 00111 122221122222222 245667
Q ss_pred HHHHHHHHHHHHHHHHc-CCcc-ccCCCccCCCceEEEEc
Q 017726 276 ERHRRLGKATRLAVEAW-GLKN-CTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~~~~~~ 313 (367)
++.+++++.+.+.|++. ++.. ..| ..+.++.|.+
T Consensus 252 ~~~~~~a~~l~~~L~~~p~v~~v~~P----~~gg~~sf~~ 287 (366)
T PRK08247 252 RQHEENAKAIAAFLNEQPGVTDVLYP----GRGGMLSFRL 287 (366)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEecC----CcCcEEEEEE
Confidence 77899999999999997 6653 233 1344677777
No 221
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.92 E-value=7.7e-23 Score=185.52 Aligned_cols=275 Identities=14% Similarity=0.132 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-H-HHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-W-IDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~-~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++. . .+ .++++||++|+..++.+++.+||+|+++++.|+... + ...++..|++++.++.+.+
T Consensus 50 ~p~~~~Le~~lA~l~--~-~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~ 125 (366)
T PRK07582 50 NPTWRALEAALGELE--G-AE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGM 125 (366)
T ss_pred CccHHHHHHHHHHHc--C-CC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCCh
Confidence 356789999999998 2 23 566688889999999888999999999999887764 2 2334567999999987532
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeecc--CceeeccccccceEEE
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI--CAIDFRMDEWGIDVAL 196 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~--~~~~~~~~~~~~d~~~ 196 (367)
+ + .+. +++++|++++|+||+|.+.|+++|.++|++ +|+++++|+++.. +..+++ .++|+++
T Consensus 126 ~----~----~~~----~~t~lV~le~p~NPtg~v~di~~I~~~a~~--~g~~lvVD~t~~~~~~~~p~~---~g~Divv 188 (366)
T PRK07582 126 A----E----AAL----AGADLVLAETPSNPGLDVCDLAALAAAAHA--AGALLVVDNTTATPLGQRPLE---LGADLVV 188 (366)
T ss_pred H----H----Hhc----cCceEEEEECCCCCCCCccCHHHHHHHHHH--cCCEEEEECCCCCccccCchh---cCCcEEE
Confidence 1 1 222 367999999999999999999999999999 9999999999753 333333 4789999
Q ss_pred ecCCCcccCCCc--ceeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHH
Q 017726 197 TGSQKALSLPTG--MGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (367)
Q Consensus 197 ~s~~K~~~g~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~ 273 (367)
+|++|+++|+.| .|+++.+ +++.+++.... .. .|. +++......+...++ -++.
T Consensus 189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~-------------~~-~g~----~~~~~~a~l~~r~l~-----tl~~ 245 (366)
T PRK07582 189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWR-------------LL-AGA----IPGPFEAWLAHRSLG-----TLGL 245 (366)
T ss_pred ecccccccCCCCeeEEEEEcCcHHHHHHHHHHH-------------HH-hCC----CCCHHHHHHHHhccc-----cHHH
Confidence 999999988877 4888874 66666554321 00 111 233322222222222 1556
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCcccc-CC---Cc---------cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc-cCC
Q 017726 274 VIERHRRLGKATRLAVEAW-GLKNCT-QK---EE---------WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-LGL 338 (367)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~-g~~~~~-~~---~~---------~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~-~g~ 338 (367)
+.++..+++..+.+.|++. .+..+. |. .+ ...+.++.|.+. +.++..+.+ +..++... ..+
T Consensus 246 R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~---~~~~~~~~~-~~l~~~~~~~s~ 321 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA---DAAAAERFV-AASRLVVAATSF 321 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC---CHHHHHHHH-HhCCcceecccC
Confidence 6788889999999999997 543222 21 11 014568889983 445555555 44465443 211
Q ss_pred CC--------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 339 NK--------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 339 ~~--------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+. ..++.||+| .+.++.+|++.++.
T Consensus 322 G~~~sl~~~~~~~~~~~~~~liR~s-vGlE~~~dli~dl~ 360 (366)
T PRK07582 322 GGVHTSADRRARWGDAVPEGFVRLS-CGIEDTDDLVADLE 360 (366)
T ss_pred CCccchhhhHHHcCCCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 10 223569998 46666676665543
No 222
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.92 E-value=8.4e-23 Score=187.33 Aligned_cols=219 Identities=15% Similarity=0.108 Sum_probs=161.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. .++++||+.|+..++.+++.+||+|+++.+.|.... +...++..|+++..++.+
T Consensus 64 ~p~~~~le~~lA~l~g~~~---~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 138 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEA---AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-- 138 (403)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC--
Confidence 3567899999999999865 356678899999999888999999999988664432 334566789999988764
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|
T Consensus 139 ---d~~~l~~~i~----~~tklV~le~p~NPtG~~~di~~I~~la~~--~gi~lIvD~a~a~~~~~~~l-~~g~Di~v~S 208 (403)
T PRK07503 139 ---DPAALKAAIS----DKTRMVYFETPANPNMRLVDIAAVAEIAHG--AGAKVVVDNTYCTPYLQRPL-ELGADLVVHS 208 (403)
T ss_pred ---CHHHHHHhcC----ccCcEEEEeCCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hhCCCEEEcc
Confidence 7899999987 467999999999999999999999999999 99999999999765332222 3578999999
Q ss_pred CCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
++|+++|+.+ .|+++.++++++++...... . ..|. .++....+.+...++ -+..+.+
T Consensus 209 ~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~-----------~-~~g~----~~s~~~a~l~l~~L~-----tl~~r~~ 267 (403)
T PRK07503 209 ATKYLGGHGDITAGLVVGGKALADRIRLEGLK-----------D-MTGA----VMSPFDAFLLMRGLK-----TLALRMD 267 (403)
T ss_pred ccccccCCCceeEEEEEcCHHHHHHHHhhhHH-----------h-CcCC----CCCHHHHHHHHcCcc-----hHHHHHH
Confidence 9999976443 58888888887777521100 0 0011 233322111111222 1556667
Q ss_pred HHHHHHHHHHHHHHHc-CCc
Q 017726 277 RHRRLGKATRLAVEAW-GLK 295 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~ 295 (367)
+..+++..+.+.|++. .+.
T Consensus 268 ~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 268 RHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 7789999999999986 443
No 223
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.92 E-value=2.4e-22 Score=183.17 Aligned_cols=311 Identities=14% Similarity=0.073 Sum_probs=219.8
Q ss_pred CCCCCCcccccCCCCCChHHHHHHHccCCCCCCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc
Q 017726 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~ 79 (367)
.++-+|.|+-...-+.+-+.+.+++.++.....+ .+......++++.|++++|.++ .++.++|..|+..++.+
T Consensus 105 l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~---all~sSGy~AN~~~i~a 181 (476)
T PLN02955 105 LLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED---CLVCPTGFAANMAAMVA 181 (476)
T ss_pred EEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc---EEEECChHHHHHHHHHH
Confidence 4456777888887777888888999887654222 2445778899999999999776 45668889999888876
Q ss_pred cC--------------CCCCeEEEEeCCcchHHHHHHHHHh----CCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE
Q 017726 80 TL--------------SPGDRIISFLIGQFSLLWIDQQQRL----NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (367)
Q Consensus 80 ~~--------------~~gd~vl~~~~~~~~~~~~~~~~~~----g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv 141 (367)
+. .+++.|+.....|.|.. ..++.. ++++..++.+ |+++|+++++... .+.++|
T Consensus 182 L~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~--dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~-~~~~~V 253 (476)
T PLN02955 182 IGSVASLLAASGKPLKNEKVAIFSDALNHASII--DGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCK-MKRKVV 253 (476)
T ss_pred HhhccccccccccccCCCCcEEEEeccchHHHH--HHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCC-CCceEE
Confidence 52 34445555444455433 333333 4666666655 8999999997654 345788
Q ss_pred EEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---------ccccccceEEEecCCCcccCCCcceee
Q 017726 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIV 212 (367)
Q Consensus 142 ~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~g~~ 212 (367)
++....++.|.+.|+++|.++|++ +|+++++|++|+.+.+.- ... ...|+++.+++|.+ |..| |++
T Consensus 254 v~EgV~SmdGdiapL~eL~~L~~~--~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~-G~~G-Gfi 328 (476)
T PLN02955 254 VTDSLFSMDGDFAPMEELSQLRKK--YGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAA-GCHG-GFI 328 (476)
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHH--cCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccch-hccC-cee
Confidence 888889999999999999999999 999999999998765421 111 25789999999998 4665 899
Q ss_pred eeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 213 CASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
++++++++.+.... ..+.+ ....++....+..++++.+... +..+++++++.+++++. .
T Consensus 329 ~gs~~~~~~l~~~~-~~~if---------------Stalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~ 387 (476)
T PLN02955 329 ACSKKWKQLIQSRG-RSFIF---------------STAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---S 387 (476)
T ss_pred ecHHHHHHHHHHhC-CCCee---------------cccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---c
Confidence 99998887776432 12122 1235555556677777776554 35677888888888873 3
Q ss_pred CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~~~~ 360 (367)
|+.+. .+++.+.+++.....++.++|.++ ||.+.+...|. ....+||++...++++|+.
T Consensus 388 G~~~~--------sPI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId 449 (476)
T PLN02955 388 GVDIS--------SPIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK 449 (476)
T ss_pred CCCCC--------CCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH
Confidence 65431 346667775555567789999765 99998765443 2346999998888776654
No 224
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.92 E-value=5.8e-23 Score=167.37 Aligned_cols=330 Identities=13% Similarity=0.145 Sum_probs=228.3
Q ss_pred cccccCCCC--CChHHHHHHHccCCCCCCCCc------H----HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHH
Q 017726 10 NHLFVPGPV--HIPDQVIRAMNRNNEDYRSPA------V----PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESAL 77 (367)
Q Consensus 10 ~~~~~~~p~--~~~~~v~~a~~~~~~~~~~~~------~----~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~ 77 (367)
.++..|=.. -++++..+++.+.++.+.--+ . .+-...+.+.+++++|.+. +-+|+|+.++-..++
T Consensus 17 ~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~---~R~t~GARe~KfavM 93 (382)
T COG1103 17 FINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDE---VRVTAGAREAKFAVM 93 (382)
T ss_pred ccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCce---eeecccchhhHHHHH
Confidence 345555322 468889999999776533111 0 1224567777999999876 679999999999999
Q ss_pred HccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccC---CCCccEEEEEecCCCccc
Q 017726 78 TNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADT---AHTIKAICIVHNETATGV 152 (367)
Q Consensus 78 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~---~~~~~lv~~~~~~n~tG~ 152 (367)
.+++.+||.|++....|++.. .++++.|.++..||.. ++..+++|...+.|++.. ...+.+.+++++....|.
T Consensus 94 hal~~~gd~vV~D~~aHYtty--vAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN 171 (382)
T COG1103 94 HALCKEGDWVVVDSLAHYTTY--VAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN 171 (382)
T ss_pred HHhccCCCEEEEcCcchHHHH--HHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC
Confidence 999999999999988888865 4589999999999954 245788888777776632 145789999999999999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+.|.+++.++|++ +|++++..++|..|.++++..+.++||++.|+||.++....+|++.++.++.+.........+-.
T Consensus 172 l~Dakkva~ic~e--~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~ 249 (382)
T COG1103 172 LADAKKVAKICRE--YGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPK 249 (382)
T ss_pred chhhHHHHHHHHH--cCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhccccccc
Confidence 9999999999999 99999999999999999999999999999999999987666899999999987765432111100
Q ss_pred chHHHHHHhh-cCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEE
Q 017726 233 DWKDYIKFYN-LGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 310 (367)
+..+ -|....+.+-+..+++.....+.... ...-.+++++|.+.|+++ |+...+..+- ...++.
T Consensus 250 ------KEvellGCT~rGapivTlmASfP~V~eRVkr------WdeEv~kaR~fv~elEkigg~~qlG~rPk--~HdLm~ 315 (382)
T COG1103 250 ------KEVELLGCTVRGAPIVTLMASFPHVVERVKR------WDEEVEKARWFVAELEKIGGVKQLGERPK--NHDLMK 315 (382)
T ss_pred ------ceeeeecccccCchHHHHHhcCHHHHHHHHH------HHHHHHHHHHHHHHHHHhhhHHHhCCCCc--ccceee
Confidence 1111 12212333333333333333333222 234467888999999999 6888775442 333566
Q ss_pred EEcCCCC--------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCC-CHHHHHHhhh
Q 017726 311 VIVPSHI--------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHL-NEVMFNFQLL 364 (367)
Q Consensus 311 ~~~~~~~--------~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~-~~~~~~~~~l 364 (367)
|..|.-. ..--|.+.|+++ ||. |..+....+|.+|.++.. ++.+....++
T Consensus 316 Fetp~f~eIakk~~r~gyFlY~ELK~R-gI~---GI~~G~Tk~~K~svyGl~~Eqve~V~~af 374 (382)
T COG1103 316 FETPVFHEIAKKHKRKGYFLYEELKKR-GIH---GIQPGQTKYFKLSVYGLSWEQVEYVVDAF 374 (382)
T ss_pred ecCchHHHHHHhCcCCceeeHHHHHhc-Ccc---ccccCceeEEEEEeecCCHHHHHHHHHHH
Confidence 6664210 111266667554 442 233333467999988744 3344433333
No 225
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=8.6e-23 Score=175.83 Aligned_cols=311 Identities=17% Similarity=0.174 Sum_probs=227.4
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC--------CCCC---cHH-HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED--------YRSP---AVP-ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA 76 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~~---~~~-~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~ 76 (367)
+.+.+++.---+++.|++++-....+ .++| .+. ....-+.++..++||++..+ +-..||+.|+..+
T Consensus 27 ~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~an--VQPhSGs~AN~av 104 (413)
T COG0112 27 EHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYAN--VQPHSGSQANQAV 104 (413)
T ss_pred hceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccc--cCCCCchHHHHHH
Confidence 45667777778899999988764321 2222 233 44445688889999999765 5557889999999
Q ss_pred HHccCCCCCeEEEEeCCcchHHHHH-HHHHhC--CceEEEeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc
Q 017726 77 LTNTLSPGDRIISFLIGQFSLLWID-QQQRLN--FNVDVVESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGV 152 (367)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~~~~-~~~~~g--~~~~~v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~ 152 (367)
+.++++|||+|+-.+..+.++.... -....| .+.+..+++. ++.+|.|++++.+.+ .|||+|++-. +-.-.
T Consensus 105 ~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e---~kPK~ii~G~--SaY~r 179 (413)
T COG0112 105 YLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKE---VKPKLIIAGG--SAYSR 179 (413)
T ss_pred HHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHH---hCCCEEEECc--ccccc
Confidence 9999999999999887666653111 011122 4555566663 478999999999998 5889998754 33445
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCCcceeeeeCH-HHHHHhccCC
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAK 226 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~-~~~~~~~~~~ 226 (367)
..|.++++++|++ .|+++++|.+|-+|.. +-++. .+|++++|+||+|.||+| |++..++ ++.+++....
T Consensus 180 ~id~~~~reIad~--VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aV 254 (413)
T COG0112 180 PIDFKRFREIADE--VGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAV 254 (413)
T ss_pred ccCHHHHHHHHHH--hCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhc
Confidence 6799999999999 9999999999965432 33333 489999999999999998 8888875 7788777643
Q ss_pred CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
.+. . .+.|....+++...++....+.+.++-.++..+|++.|.+.|.+.|+++++... .+
T Consensus 255 FPg---------------~--qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgT---dn 314 (413)
T COG0112 255 FPG---------------L--QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGT---DN 314 (413)
T ss_pred CCc---------------c--CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCc---cc
Confidence 321 1 223777778899999999999888999999999999999999999999998532 34
Q ss_pred ceEEEEcC-CCCCHHHHHHHHHhhCCeEEccC---CC---CCCCcEEEEeecC
Q 017726 307 TVTAVIVP-SHINSSEIVRRAWQRYNLSLGLG---LN---KVAGKVFRIGHLG 352 (367)
Q Consensus 307 ~~~~~~~~-~~~~~~~l~~~L~~~~gv~v~~g---~~---~~~~~~iRi~~~~ 352 (367)
+++.+++. ++.+.++....| ++.||.+--. ++ +..++.||||...
T Consensus 315 Hl~lVDl~~~~~~Gk~ae~~L-~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa 366 (413)
T COG0112 315 HLVLVDLRSKGLTGKKAEAAL-ERAGITVNKNAIPFDPESPFVTSGIRIGTPA 366 (413)
T ss_pred eEEEEEcccCCCCHHHHHHHH-HHcCEeeccCCCCCCCCCCCCCccceeccHH
Confidence 45556663 356777776666 6679988522 11 3345669998743
No 226
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.92 E-value=1e-22 Score=181.82 Aligned_cols=312 Identities=18% Similarity=0.155 Sum_probs=201.9
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCC--------C---CCcH-HHHHHHHHHHHHHHhcCCCCce--EEecCChhHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY--------R---SPAV-PALTKTLLEDIKKIFKTTSGTP--FLIPTTGTGAWE 74 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~~-~~~~~~~~~~la~~~~~~~~~~--v~~~~ggt~al~ 74 (367)
+.+.++|.--.+++.+++++.....+. + +..+ ..+..-++++++++|++++.++ -+=.-||+.|+.
T Consensus 21 ~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~ 100 (399)
T PF00464_consen 21 STLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANL 100 (399)
T ss_dssp HSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHH
T ss_pred cCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHH
Confidence 456788888889999999988743321 1 1223 3444446788899999984322 245568999999
Q ss_pred HHHHccCCCCCeEEEEeCCcchHH---HH-HH----HHHhCCceEEEeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEe
Q 017726 75 SALTNTLSPGDRIISFLIGQFSLL---WI-DQ----QQRLNFNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~---~~-~~----~~~~g~~~~~v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
.++.++++|||+|+..+..+.++. .. .. +.....+....+++ +.+.+|.|++++.+++ .+||+|++..
T Consensus 101 av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~---~kPklIi~G~ 177 (399)
T PF00464_consen 101 AVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKE---HKPKLIICGA 177 (399)
T ss_dssp HHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHH---H--SEEEEE-
T ss_pred HHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhh---cCCCEEEECc
Confidence 999999999999999988654432 11 00 12234667777777 5678999999999997 5789999876
Q ss_pred cCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC-----ceeeccccccceEEEecCCCcccCCCcceeeeeC-----
Q 017726 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-----AIDFRMDEWGIDVALTGSQKALSLPTGMGIVCAS----- 215 (367)
Q Consensus 146 ~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~-----~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~----- 215 (367)
-.+ -...|.++++++|++ .|+++++|.+|..| ..+-++. ++|++++|+||+|.||.| |++..+
T Consensus 178 S~y--~~~~d~~~~reIad~--vga~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~GPrg-giI~~~~~~~~ 250 (399)
T PF00464_consen 178 SSY--PRPIDFKRFREIADE--VGAYLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRGPRG-GIILTNKGSKN 250 (399)
T ss_dssp SST--SS---HHHHHHHHHH--TT-EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-SSS--EEEEES-SEEE
T ss_pred hhc--cCccCHHHHHHHHHh--cCcEEEecccccccceehheecCccc--cceEEEeeccccccccCc-eEEEEcCCccc
Confidence 443 345789999999999 99999999999654 3344554 489999999999999997 999988
Q ss_pred ---------HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Q 017726 216 ---------PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATR 286 (367)
Q Consensus 216 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~ 286 (367)
+++.+++.....+ +. ...+....++++..++..+.....++-.++..+|++.|.
T Consensus 251 ~~~~~~~~~~~l~~~I~~avfP---------------~~--qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La 313 (399)
T PF00464_consen 251 VDKKGKEIDEELAEKIDSAVFP---------------GL--QGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALA 313 (399)
T ss_dssp E-TTS-EEEHHHHHHHHHHHTT---------------TT---SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHhccccCC---------------Cc--ccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 6777766643222 11 223667777888888888766556788999999999999
Q ss_pred HHHHHcCCccccCCCccCCCceEEEEcC-CCCCHHHHHHHHHhhCCeEEcc----CCC-CCCCcEEEEeec
Q 017726 287 LAVEAWGLKNCTQKEEWFSDTVTAVIVP-SHINSSEIVRRAWQRYNLSLGL----GLN-KVAGKVFRIGHL 351 (367)
Q Consensus 287 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~~gv~v~~----g~~-~~~~~~iRi~~~ 351 (367)
+.|.+.|+.++... ..++++++++. .+++..+..+.| ++.||.+.. +.. +..++.+|||..
T Consensus 314 ~~L~~~G~~v~~gg---Td~H~vlvd~~~~~~~g~~a~~~L-e~~gI~vnkn~iP~d~~~~~~sGlRlGT~ 380 (399)
T PF00464_consen 314 EALQERGFKVVTGG---TDNHQVLVDLRSFGIDGKEAEKAL-EEAGIIVNKNTIPGDRSPFVPSGLRLGTP 380 (399)
T ss_dssp HHHHHTT-EEGGGS----SSSEEEEEGGGGTS-HHHHHHHH-HHTTEE-EEE--TTTSTTTT-SEEEEESH
T ss_pred HHHhhCCcEEEECC---CCCCeEEEEecccccchHHHHHHH-HhcCeeecccccCCCCCCCCCCEEEECCH
Confidence 99999999998743 45667888883 356777877777 577998853 221 233467999973
No 227
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.4e-22 Score=184.30 Aligned_cols=282 Identities=17% Similarity=0.120 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++.|.+. . +++++|+.++..++ .++.+||+|+++++.|.+.. +...+...|++++.++..
T Consensus 49 ~p~~~~Le~~lA~l~g~~~--~-~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 122 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHA--G-FAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS-- 122 (377)
T ss_pred ChHHHHHHHHHHHHhCCCc--e-EEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCC--
Confidence 4667899999999999765 3 55677788887655 56889999999999877543 344566789999888743
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+...-+ ...++|++++|
T Consensus 123 ---d~~~l~~ai~----~~tklV~le~P~NPtg~~~dl~~I~~la~~--~g~~lvvD~a~~~~~~~~p-~~~g~Divv~S 192 (377)
T PRK07671 123 ---NLEEVEEAIR----PNTKAIYVETPTNPLLKITDIKKISTIAKE--KGLLTIVDNTFMTPYWQSP-ISLGADIVLHS 192 (377)
T ss_pred ---CHHHHHHhcC----CCCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEECCCCccccCCh-hhhCCeEEEec
Confidence 7899999997 467999999999999999999999999999 9999999999875432222 24578999999
Q ss_pred CCCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+++|+.+ .|++++ ++++.+++...+ . ..|. ..+... .+.++.-+ .-+..++
T Consensus 193 ~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~-------------~-~~g~----~~~~~~---a~l~~~~l--~tl~~R~ 249 (377)
T PRK07671 193 ATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ-------------N-STGG----ILGPQD---SWLLLRGL--KTLGIRM 249 (377)
T ss_pred CcccccCCccceeEEEEeCcHHHHHHHHHHH-------------H-hhcC----CCCHHH---HHHHHcCc--ChHHHHH
Confidence 9999987754 366666 456666554321 0 0111 122211 11111111 1155678
Q ss_pred HHHHHHHHHHHHHHHHc-CC-ccccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCCC-
Q 017726 276 ERHRRLGKATRLAVEAW-GL-KNCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGLN- 339 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~-~~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~~- 339 (367)
++.++++..+.+.|++. ++ .++-|. +. ...+.++.|.+ .+. ....|++.|. -..+.+.-|-.
T Consensus 250 ~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~f~~~l~-l~~~~~s~G~~~ 327 (377)
T PRK07671 250 EEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANKVLERLQ-YFTLAESLGAVE 327 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHHHHHhCC-cceEccCCCCCC
Confidence 88899999999999986 43 222221 00 12356888988 331 1233444432 11112211110
Q ss_pred -----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 -----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 -----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ..++.||+| .|-++.+|++.++-
T Consensus 328 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 373 (377)
T PRK07671 328 SLISIPSQMTHASIPADRRKELGITDGLIRIS-VGIEDGEDLIEDLA 373 (377)
T ss_pred eEeECCCccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0 113469998 58788888876653
No 228
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=7.5e-23 Score=188.31 Aligned_cols=159 Identities=14% Similarity=0.095 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|.+. .++++||++|+.+++.+++.+||+|+++...|.+.. +...++..|++++.++.+
T Consensus 63 ~p~~~~le~~lA~l~g~~~---av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 137 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVG---AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-- 137 (433)
T ss_pred ChHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC--
Confidence 3568899999999999765 588899999999999888999999999998887653 233456689999999864
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ ++||+|++.+++||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|
T Consensus 138 ---d~~~l~~~i~----~~TklV~~e~~~np~g~v~Di~~I~~la~~--~gi~livD~t~a~~~~~~pl-~~GaD~vv~S 207 (433)
T PRK08134 138 ---DIDGWRAAIR----PNTRLLFGETLGNPGLEVLDIPTVAAIAHE--AGVPLLVDSTFTTPYLLRPF-EHGADLVYHS 207 (433)
T ss_pred ---CHHHHHHhcC----CCCeEEEEECCCcccCcccCHHHHHHHHHH--cCCEEEEECCCcccccCCch-hcCCCEEEec
Confidence 7999999998 577999999999999999999999999999 99999999999877665444 5689999999
Q ss_pred CCCcccCCCc-ceeeee
Q 017726 199 SQKALSLPTG-MGIVCA 214 (367)
Q Consensus 199 ~~K~~~g~~g-~g~~~~ 214 (367)
.||+++|+.. +|.+++
T Consensus 208 ~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 208 ATKFLGGHGTAIGGVLV 224 (433)
T ss_pred cccccCCCCCceEEEEE
Confidence 9999965432 344433
No 229
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=3e-22 Score=182.96 Aligned_cols=284 Identities=14% Similarity=0.069 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
....+++++.++++.|.+ .+++++||++|+..++.+++.+||+|+++++.|.+.. +...+...|+++..++..
T Consensus 64 ~pt~~~Le~~lA~l~g~~---~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~-- 138 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGR---HALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL-- 138 (394)
T ss_pred CHHHHHHHHHHHHHhCCC---eEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC--
Confidence 355789999999999954 4889999999999999999999999999999887654 334567789999888643
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+.++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+.. ......|+|+++.|
T Consensus 139 ---~~~~l~~~i~----~~tklV~le~p~Np~~~~~di~~I~~ia~~--~gi~livD~a~a~~~~-~~~l~~GaDi~v~S 208 (394)
T PRK07050 139 ---IGAGIADLIQ----PNTRLIWLEAPGSVTMEVPDVPAITAAARA--RGVVTAIDNTYSAGLA-FKPFEHGVDISVQA 208 (394)
T ss_pred ---CHHHHHHhcC----CCCeEEEEECCCCCCccHhhHHHHHHHHHH--cCCEEEEECCcccccc-cCHHHcCCeEEEEE
Confidence 4578888887 577999999999999999999999999999 9999999999987654 33334578999999
Q ss_pred CCCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
.+|+++|..+ .|.++. ++++.+++...+ ...|. +.+.. ..+.++..+. .+..+.
T Consensus 209 ~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~--------------~~~G~----~~~~~---~a~l~lr~l~--tl~~Rl 265 (394)
T PRK07050 209 LTKYQSGGSDVLMGATITADAELHAKLKLAR--------------MRLGI----GVSAD---DCSLVLRGLP--SLQVRL 265 (394)
T ss_pred CCceecCCCCeeEEEEEECCHHHHHHHHHHH--------------HhcCC----CCCHH---HHHHHHcCCC--cHHHHH
Confidence 9999987654 365554 667766665321 11121 12221 1122222111 255577
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-cccCC----C--------ccCCCceEEEEcCCCC---CHHHHHHHHHhhCCeEEccCC
Q 017726 276 ERHRRLGKATRLAVEAW-GLK-NCTQK----E--------EWFSDTVTAVIVPSHI---NSSEIVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~~~~~----~--------~~~~~~~~~~~~~~~~---~~~~l~~~L~~~~gv~v~~g~ 338 (367)
++..+++..+.+.|++. ++. ++-|. + ....+.++.|.+..+. +.+++++.|+ ..++.+.-|-
T Consensus 266 ~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~-~~~~~~s~G~ 344 (394)
T PRK07050 266 AAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALE-LFAIGWSWGG 344 (394)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCC-CCeeccccCC
Confidence 78888888999999986 443 22111 0 0124567888884332 3456666664 3454444331
Q ss_pred -C----C------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 339 -N----K------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 339 -~----~------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
. + ..++.||+| .|-++.+|+..++-
T Consensus 345 ~~sl~~~~~~~~~~~~~~~~~~~~iR~s-vGlE~~~dl~~dl~ 386 (394)
T PRK07050 345 ACSLAMPYDVASMRTAKWPHRGTLVRLY-IGLEDEADLIADLE 386 (394)
T ss_pred ccceEeeCcccccchhhcCCCCCEEEEE-eCcCCHHHHHHHHH
Confidence 1 1 123569998 57777777776653
No 230
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=1.3e-22 Score=186.89 Aligned_cols=159 Identities=18% Similarity=0.180 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
......+++.++++.|.+. .++++||+.|+..++.+++.+||+|+++++.|.+.. +...++..|++++.++..
T Consensus 63 ~p~~~~Le~~lA~leg~~~---al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~-- 137 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIG---ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS-- 137 (431)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC--
Confidence 3557789999999999643 578899999999999888999999999998776653 456678899999999763
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||||.+.|+++|.++|++ +|+++|+|++++.+....+. ++++|+++.|
T Consensus 138 ---d~e~l~~ai~----~~tklV~l~sp~NPtG~v~di~~I~~la~~--~gi~vIvD~t~a~~~~~~pl-~~gaDivv~S 207 (431)
T PRK08248 138 ---DPENFEAAIT----DKTKALFAETIGNPKGDVLDIEAVAAIAHE--HGIPLIVDNTFASPYLLRPI-EHGADIVVHS 207 (431)
T ss_pred ---CHHHHHHhcC----CCCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCEEEEeCCCCccccCChh-HcCCCEEEEc
Confidence 7999999997 467999999999999999999999999999 99999999998754333333 5689999999
Q ss_pred CCCcccCCCc-ceeeee
Q 017726 199 SQKALSLPTG-MGIVCA 214 (367)
Q Consensus 199 ~~K~~~g~~g-~g~~~~ 214 (367)
.+|+++|+.. +|.+++
T Consensus 208 ~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 208 ATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CccccCCCCCceEEEEE
Confidence 9999976542 455554
No 231
>PRK07049 methionine gamma-lyase; Validated
Probab=99.92 E-value=1.4e-22 Score=186.82 Aligned_cols=290 Identities=13% Similarity=0.110 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-H-HHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-W-IDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~-~~~~~~~g~~~~~v~~~~~~ 119 (367)
.....+++.++++.|.+. +++++||++|+..++.+++++||.|+++.|.|..+. . ...++..|++++.++..
T Consensus 83 Pt~~~Le~~lA~leg~~~---~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~--- 156 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAES---AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG--- 156 (427)
T ss_pred cCHHHHHHHHHHHhCCCc---EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC---
Confidence 446789999999998553 677799999999999999999999999999887764 2 33456678887666522
Q ss_pred CCCHHHHHHHHhccC-CCCccEEEEEecCCCccccccHHHHHHHHHhcC----CCcEEEEeeeeccCceeeccccccceE
Q 017726 120 GAKLDVLASKLAADT-AHTIKAICIVHNETATGVTNNLSKVRKLLDEYR----HPALFLVDGVSSICAIDFRMDEWGIDV 194 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~-~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~----~~~~vi~D~~~~~~~~~~~~~~~~~d~ 194 (367)
.|++++++++.+.. .+++|+|++++|+||||.++|++++.++++... +++++++|+++......-+. ..++|+
T Consensus 157 -~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl-~~g~di 234 (427)
T PRK07049 157 -LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL-EHGADL 234 (427)
T ss_pred -CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc-ccCCCE
Confidence 46788887775321 146899999999999999999999999987621 58999999997543221122 346899
Q ss_pred EEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChH
Q 017726 195 ALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLE 272 (367)
Q Consensus 195 ~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~ 272 (367)
++.|++|+++|..| +|+++.++++++++..... ..| .+.+......+..+++. +.
T Consensus 235 vv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~--------------~~g----~~ls~~~a~l~~r~L~t-----l~ 291 (427)
T PRK07049 235 SVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRS--------------AIG----TQLDPHSCWMLGRSLET-----LV 291 (427)
T ss_pred EEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHH--------------hcC----CCCCHHHHHHHHcCCCh-----HH
Confidence 99999999986555 4999999988877753211 001 12444332333333322 55
Q ss_pred HHHHHHHHHHHHHHHHHHHc-CCccc-cC-----CCc---------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEc
Q 017726 273 NVIERHRRLGKATRLAVEAW-GLKNC-TQ-----KEE---------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~-g~~~~-~~-----~~~---------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~ 335 (367)
.++++..+++..+.+.|++. ++..+ -| +.. ...+.++.|.+..+. ....|++.|+ -..+.+.
T Consensus 292 ~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-l~~~~~s 370 (427)
T PRK07049 292 LRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQ-IFKLAVS 370 (427)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCc-ccEEccc
Confidence 66777799999999999987 54321 11 110 123568889883221 1334555442 2222222
Q ss_pred cC-CC-----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 336 LG-LN-----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 336 ~g-~~-----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
-| .. + ..++.||+| .|-++.+|+..++-
T Consensus 371 lG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~s-vGlE~~~dl~~dl~ 421 (427)
T PRK07049 371 LGGTESLASHPASMTHSGVPADVRERIGVLESTIRLS-IGIEHPDDLIADLA 421 (427)
T ss_pred CCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEE-eCcCCHHHHHHHHH
Confidence 22 11 0 113469998 57777787776553
No 232
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.92 E-value=1.4e-22 Score=197.07 Aligned_cols=313 Identities=12% Similarity=0.026 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHH---HHHccC-----CCCCeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWES---ALTNTL-----SPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~---~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
..+...++.++++++.|.+.. -+..++|+.+-.. +++... ...++|+++...|.++. ..+...|++++
T Consensus 528 ~lq~i~elq~~l~eltGmd~~--Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP--asa~~~G~~Vv 603 (939)
T TIGR00461 528 YQELIAQLEKWLCSITGFDAI--SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP--ASAAMAGMQVV 603 (939)
T ss_pred HHHHHHHHHHHHHHHHCCCCc--ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH--HHHHHCCCEEE
Confidence 567888999999999999963 3677777765553 333211 13356888888887764 33677899999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-HHHHHHHHHhcCCCcEEEEeeeeccCc-eeecccc
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-LSKVRKLLDEYRHPALFLVDGVSSICA-IDFRMDE 189 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~-~~~i~~~~~~~~~~~~vi~D~~~~~~~-~~~~~~~ 189 (367)
.++++.++.+|+++|+++++++. +++++|++++|+| +|.+.| +++|+++||+ +|.++++|+++..+. ...+..+
T Consensus 604 ~V~~d~~G~iDle~L~~~i~~~~-~~taaV~iT~pst-~G~~e~~I~eI~~iah~--~G~~v~VDgAq~~al~~l~~Pg~ 679 (939)
T TIGR00461 604 PVNCDQDGNIDLVDLKNKAEQHG-DELAAVMVTYPST-HGVFEPTIQHACDIVHS--FGGQVYLDGANMNAQVGLTSPGD 679 (939)
T ss_pred EeccCCCCCcCHHHHHHHHhhcC-CceEEEEEEeCCc-CceecccHHHHHHHHHH--cCCEEEEEecChhhCCCCCCccc
Confidence 99998899999999999998643 4789999999998 799887 9999999999 999999999996633 3334466
Q ss_pred ccceEEEecCCCccc-----CCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCC-ccCCCCcHHHHHHHHHHH
Q 017726 190 WGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGT-FWPYTPSIQLLYGLRAAL 263 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~-----g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~al 263 (367)
.++|++++|.||+|+ |++|+|++++++.+...+....... ..+.....+ ..+. ....+.+...+...+..+
T Consensus 680 ~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~-t~d~~greq--~Iga~s~~~~g~a~~~l~a~~yi 756 (939)
T TIGR00461 680 LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVS-MITGIGGSK--SIGSVSAAPYGSASILPISWMYI 756 (939)
T ss_pred cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccc-cccCCCCcc--ccccccccccCcHHHHHHHHHHH
Confidence 799999999999998 5667799999988766555332211 011100000 0111 111234555556677777
Q ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC-----CCCHHHHHHHHHhhCCeEEccCC
Q 017726 264 DLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS-----HINSSEIVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 264 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~gv~v~~g~ 338 (367)
..+..+|++++.+....+++|++++|++ ++++..+........-+.++++. +.+..++.++|.+. |+..-.-.
T Consensus 757 ~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~-G~hapt~~ 834 (939)
T TIGR00461 757 KMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDY-GFHAPTLS 834 (939)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhC-CeeccccC
Confidence 8888899999999999999999999988 55554432111111235566631 46788999999765 88654311
Q ss_pred CCCCCc-EEEEeecCCCCHHHHHHhhhh
Q 017726 339 NKVAGK-VFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 339 ~~~~~~-~iRi~~~~~~~~~~~~~~~l~ 365 (367)
.+..+. .+|.+-....++.|.+.+++.
T Consensus 835 ~pv~g~lmiepTE~eskeelD~f~~al~ 862 (939)
T TIGR00461 835 FPVPGTLMVEPTESESLEELDRFCDAMI 862 (939)
T ss_pred CccCCeEEEEeeccCCHHHHHHHHHHHH
Confidence 233343 267664334445555555543
No 233
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.92 E-value=2e-22 Score=187.33 Aligned_cols=308 Identities=18% Similarity=0.112 Sum_probs=204.4
Q ss_pred ChHHHHHHHccCCCC--CCCC--cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCC
Q 017726 20 IPDQVIRAMNRNNED--YRSP--AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIG 93 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~~~--~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~ 93 (367)
.++.+.+++.+.... +... ...+...++++.++++++.+. +.+++++||++|+..++..+ ..++++|++.++.
T Consensus 53 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~ 131 (413)
T cd00610 53 NHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL-DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGA 131 (413)
T ss_pred CCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC-CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCC
Confidence 345566666554321 1111 124678899999999998644 35999999999999998865 3678999999998
Q ss_pred cchHHHHHHHHHh-----------CCceEEEeCCC------CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-
Q 017726 94 QFSLLWIDQQQRL-----------NFNVDVVESDW------GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (367)
Q Consensus 94 ~~~~~~~~~~~~~-----------g~~~~~v~~~~------~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~- 155 (367)
|++.......... ..++..++.+. ++..|+++++++++++. .+++++++...++++|.+.+
T Consensus 132 yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~vi~~p~~~~~G~~~~~ 210 (413)
T cd00610 132 YHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP-EEVAAVIVEPIQGEGGVIVPP 210 (413)
T ss_pred cCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCC-CCEEEEEEccccCCCCCccCC
Confidence 8886422211111 12355666552 23347899999988642 35678888888888899887
Q ss_pred ---HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCC
Q 017726 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (367)
Q Consensus 156 ---~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~ 227 (367)
+++|.++|++ +|+++++|++|+.... ..+......|++ +.+|+++++.++|++++++++++.+....
T Consensus 211 ~~~l~~l~~l~~~--~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~- 285 (413)
T cd00610 211 PGYLKALRELCRK--HGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGP- 285 (413)
T ss_pred HHHHHHHHHHHHH--cCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcHHHHHhhccCC-
Confidence 8999999999 9999999999874311 111122234655 55699986666899999999888761000
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCC--ccccCCCccCC
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGL--KNCTQKEEWFS 305 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~~~~~~ 305 (367)
.... ..++.+...+++..++++.+.+. ++.++..++.+++++.|+++.. ....... ..
T Consensus 286 -------------~~~~--~t~~~~~~~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~--~~ 345 (413)
T cd00610 286 -------------GLHG--GTFGGNPLACAAALAVLEVLEEE---GLLENAAELGEYLRERLRELAEKHPLVGDVR--GR 345 (413)
T ss_pred -------------CCCC--CCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEEee--cC
Confidence 0001 13345556667777788887663 4567888889999999888621 2221101 23
Q ss_pred CceEEEEcCCC--------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 306 DTVTAVIVPSH--------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 306 ~~~~~~~~~~~--------~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+.++++.+++. ....++++.|.++ ||.+.++. +..+|+++....+++++
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~----~~~lR~~~~~~~t~~~i 402 (413)
T cd00610 346 GLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG----GNVIRLLPPLIITEEEI 402 (413)
T ss_pred ceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHH
Confidence 45677777443 3456788888755 99998764 46799987776665544
No 234
>PLN02509 cystathionine beta-lyase
Probab=99.92 E-value=2e-22 Score=185.74 Aligned_cols=281 Identities=14% Similarity=0.120 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
...+++++.++++.+.+. .++++||+.++..++ .++.+||+|+++.+.|.+.. +...+...|++++.++..
T Consensus 133 pt~~aLE~~lA~leg~e~---ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~--- 205 (464)
T PLN02509 133 PTRDALESLLAKLDKADR---AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT--- 205 (464)
T ss_pred HHHHHHHHHHHHHhCCCE---EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC---
Confidence 467899999999987543 466678888886555 56899999999999887754 334556789998888642
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|++++++++. +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|+
T Consensus 206 --d~e~l~~ai~----~~TklV~lesPsNPtG~i~Dl~~I~~lAk~--~g~~lIVD~A~a~~~~~~pl-~~gaDivv~S~ 276 (464)
T PLN02509 206 --NLDEVAAAIG----PQTKLVWLESPTNPRQQISDIRKIAEMAHA--QGALVLVDNSIMSPVLSRPL-ELGADIVMHSA 276 (464)
T ss_pred --CHHHHHHhCC----cCCeEEEEECCCCCCCCHHHHHHHHHHHHH--cCCEEEEECCccccccCChh-hcCCcEEEecC
Confidence 7899999987 467999999999999999999999999999 99999999998776543332 35799999999
Q ss_pred CCcccCCCc--ceeeeeCHHH-HHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTG--MGIVCASPKA-LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g--~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+++|+.+ .|+++++++. .+++... .+. .+. ..+....+.+...++. ++.+++
T Consensus 277 tK~l~G~gdv~gG~v~~~~~~l~~~~~~~-------------~~~-~g~----~l~p~~A~l~lr~L~t-----L~~R~~ 333 (464)
T PLN02509 277 TKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------------QNS-EGS----GLAPFDCWLCLRGIKT-----MALRIE 333 (464)
T ss_pred cccccCCCccceeEEEeccHHHHHHHHHH-------------HHh-cCC----CcCHHHHHHHHhhhhh-----HHHHHH
Confidence 999987765 5888875543 3332211 000 121 1233222222223333 567788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC-C-
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL-N- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~-~- 339 (367)
+.++++..+.+.|++. .++ +.-|. +. ...+.+++|.+ .+. ....|++.|+ -..+.+.-|- .
T Consensus 334 r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~f~~~l~-l~~~a~slG~~~S 411 (464)
T PLN02509 334 KQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKHLVETTK-YFSIAVSFGSVKS 411 (464)
T ss_pred HHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHHHHHcCC-cceEcccCCCCCc
Confidence 9999999999999986 442 22221 11 12356888887 332 1334444442 2222222221 0
Q ss_pred ----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 340 ----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 340 ----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
+ ...+.||+| .|-++.+|++.++-
T Consensus 412 Li~~p~~~sh~~~~~~~~~~~Gi~~~liRlS-vGlE~~~DLi~Dl~ 456 (464)
T PLN02509 412 LISMPCFMSHASIPAEVREARGLTEDLVRIS-AGIEDVDDLISDLD 456 (464)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 0 113569998 57778888776653
No 235
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.92 E-value=2.2e-22 Score=183.05 Aligned_cols=213 Identities=13% Similarity=0.080 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++.|.+. .++++||+.|+.+++ +++.+||+|+++++.|.+.. +...+...|+++..++..
T Consensus 49 ~p~~~~Le~~la~l~g~~~---al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~-- 122 (380)
T PRK06176 49 NPTRFALEELIADLEGGVK---GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS-- 122 (380)
T ss_pred ChhHHHHHHHHHHHhCCCC---EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC--
Confidence 3557899999999999665 355588888998666 46799999999998776653 445677789988888753
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+....+. ..++|++++|
T Consensus 123 ---d~e~l~~ai~----~~t~lV~lesP~Nptg~~~di~~I~~la~~--~gi~vivD~t~a~~~~~~p~-~~gaDivv~S 192 (380)
T PRK06176 123 ---DLSQIKKAIK----PNTKALYLETPSNPLLKITDLAQCASVAKD--HGLLTIVDNTFATPYYQNPL-LLGADIVVHS 192 (380)
T ss_pred ---CHHHHHHhcC----cCceEEEEECCCCCCceecCHHHHHHHHHH--cCCEEEEECCccccccCCcc-ccCCCEEEec
Confidence 7999999987 467999999999999999999999999999 99999999998865432222 4689999999
Q ss_pred CCCcccCCCc--ceeeeeCH-HHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
++|+++|+.. .|+++.++ ++.+++.... + ..|. ..+....+ +....-..+..+.
T Consensus 193 ~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~-------------~-~~G~----~~~~~~~~-----l~~~gl~tl~~R~ 249 (380)
T PRK06176 193 GTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ-------------N-AIGG----VLGPQDSW-----LLQRGIKTLGLRM 249 (380)
T ss_pred CceeccCCccceeeEEEecHHHHHHHHHHHH-------------H-HhcC----CCCHHHHH-----HHHhccCcHHHHH
Confidence 9999987653 37677754 4444443210 0 1121 11221111 1111112256677
Q ss_pred HHHHHHHHHHHHHHHHc
Q 017726 276 ERHRRLGKATRLAVEAW 292 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~ 292 (367)
++.++++..+.+.|++.
T Consensus 250 ~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 250 EAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 78888899999999886
No 236
>PRK04311 selenocysteine synthase; Provisional
Probab=99.91 E-value=4.1e-22 Score=183.72 Aligned_cols=289 Identities=16% Similarity=0.112 Sum_probs=196.5
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCCC--CCc-----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYR--SPA-----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~--~~~-----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+..+.+..|-.++++++++++.+....+. .++ ....+.++++.+++++|.+. .++++|++.|+.+++.+
T Consensus 86 g~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~---a~vv~sgtaAl~l~l~~- 161 (464)
T PRK04311 86 GVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAED---ALVVNNNAAAVLLALNA- 161 (464)
T ss_pred ccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHH-
Confidence 35567777888899999999988654322 111 13456799999999999864 56778899999988865
Q ss_pred CCCCCeEEEEeCCcch----HHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCC--cc--c
Q 017726 81 LSPGDRIISFLIGQFS----LLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA--TG--V 152 (367)
Q Consensus 81 ~~~gd~vl~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~--tG--~ 152 (367)
+.+||+|++++.+++. .++....+..|+++++++.+. ..++++++++++ ++|++|++++++|+ +| .
T Consensus 162 l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~----~~TklV~~vh~sN~~i~G~~~ 235 (464)
T PRK04311 162 LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN----ENTALLLKVHTSNYRIEGFTK 235 (464)
T ss_pred hCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC----ccCeEEEEEcCCCccccccCC
Confidence 5799999999876552 234455677899999997643 357899999998 46799999999998 34 5
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccC---------cee--eccccccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSIC---------AID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~---------~~~--~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
..|+++|.++||+ +|+++++|.+++.. ..+ .+....|+|++++|++|+++||. .|+++++++++++
T Consensus 236 ~~dl~eI~~lak~--~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~~li~~ 312 (464)
T PRK04311 236 EVSLAELAALGKE--HGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIAR 312 (464)
T ss_pred cCCHHHHHHHHHH--cCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEcHHHHHH
Confidence 6799999999999 99999999854321 111 12223689999999999998775 6999999999987
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-----C------hHHHHHHHHHHHHHHHHHHH
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-----G------LENVIERHRRLGKATRLAVE 290 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-----g------~~~~~~~~~~~~~~l~~~L~ 290 (367)
+...... ..+. ..-..+.++.+++..+... + +....++.++++..+.+.|+
T Consensus 313 l~~~~~~----------r~lr--------~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~ 374 (464)
T PRK04311 313 LKKHPLK----------RALR--------VDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALK 374 (464)
T ss_pred HhhchhH----------HHHh--------cchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 7632110 1111 1223335566666643211 1 22334667778888888887
Q ss_pred Hc---C--CccccC--------CCcc-CCCceEEEEcCCCCCHHHHHHHHHh
Q 017726 291 AW---G--LKNCTQ--------KEEW-FSDTVTAVIVPSHINSSEIVRRAWQ 328 (367)
Q Consensus 291 ~~---g--~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (367)
+. + +.+... .+.. .....+.+. +.+.+..++.++|++
T Consensus 375 ~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~-~~~~~~~~l~~~lr~ 425 (464)
T PRK04311 375 AALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLT-PKDRSLEALAARLRL 425 (464)
T ss_pred hccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEe-CCCCCHHHHHHHHhc
Confidence 75 2 233332 1111 111223333 346678999999964
No 237
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=3.3e-22 Score=182.66 Aligned_cols=299 Identities=13% Similarity=0.064 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|... .+.++||+.|+.+++.+++.+||+||++.+.|.+.. +...+...|+++..++.
T Consensus 60 nPtv~~lE~~la~leg~~~---av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~--- 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVG---AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP--- 133 (432)
T ss_pred CcHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC---
Confidence 3567899999999999765 567899999999999988999999999998877653 33446778999998864
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
.+|+++++++|+ ++||+|++.+|+||++.+.|+++|.++|++ +|+++++|++.+.+. .....+.|+|+++.|
T Consensus 134 -~~d~~~l~~~I~----~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~--~gi~livD~T~~tP~-~~~pl~~GADIvv~S 205 (432)
T PRK06702 134 -NLTADEIVALAN----DKTKLVYAESLGNPAMNVLNFKEFSDAAKE--LEVPFIVDNTLATPY-LCQAFEHGANIIVHS 205 (432)
T ss_pred -CCCHHHHHHhCC----cCCeEEEEEcCCCccccccCHHHHHHHHHH--cCCEEEEECCCCchh-hCChhhcCCCEEEEc
Confidence 368999999998 467999999999999999999999999999 999999999976432 123345689999999
Q ss_pred CCCcccCCCcc--eeeeeCHHHH--H----Hhcc----CCCCceeec--hHH----HHHHh--hcCCccCCCCcHHHHHH
Q 017726 199 SQKALSLPTGM--GIVCASPKAL--E----ASKT----AKSVRVFFD--WKD----YIKFY--NLGTFWPYTPSIQLLYG 258 (367)
Q Consensus 199 ~~K~~~g~~g~--g~~~~~~~~~--~----~~~~----~~~~~~~~~--~~~----~~~~~--~~~~~~~~~~~~~~~~a 258 (367)
.+|+++|..+. |+++.++.+. . .+.. .....+..+ ... ..... ..|. .++....+.
T Consensus 206 ~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~sp~~a~l 281 (432)
T PRK06702 206 TTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGN----CMSPFNAYI 281 (432)
T ss_pred cccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccC----CCCHHHHHH
Confidence 99999887552 5554333210 0 0000 000000000 000 00001 1121 344422222
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc-CC-Cc------------cCCCceEEEEcCCCC-CHHHH
Q 017726 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT-QK-EE------------WFSDTVTAVIVPSHI-NSSEI 322 (367)
Q Consensus 259 l~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~-~~------------~~~~~~~~~~~~~~~-~~~~l 322 (367)
+..+|+ -++.+.++.++|+..+.+.|++. .+..+. |. +. ...+.+++|.+..+. ...+|
T Consensus 282 ~~rgL~-----Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f 356 (432)
T PRK06702 282 SNIGLE-----TLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEF 356 (432)
T ss_pred HHhccC-----cHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHH
Confidence 222222 26777888899999999999997 544322 21 10 123568899984221 13345
Q ss_pred HHHHHhhCCeEEccC-CC-----C-----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 323 VRRAWQRYNLSLGLG-LN-----K-----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g-~~-----~-----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
++.|+ -..+.+.-| .. + ..++.||+| .|-++.+|+..++-
T Consensus 357 ~~~l~-l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlS-vGlEd~eDLi~Dl~ 419 (432)
T PRK06702 357 IANVK-LATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLS-VGIEDVSDIIADLE 419 (432)
T ss_pred HHhCc-cceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 55552 223222222 11 0 013469998 57777777776653
No 238
>PRK05939 hypothetical protein; Provisional
Probab=99.91 E-value=4.2e-22 Score=181.84 Aligned_cols=160 Identities=16% Similarity=0.184 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~ 119 (367)
.+...++++.++++.|... + +.+++|+.|+..++.+++++||+|+++++.|.+.. +...++..|++++.++..
T Consensus 46 ~p~~~~lE~~la~leg~~~--~-v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~--- 119 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVG--T-VCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT--- 119 (397)
T ss_pred CHHHHHHHHHHHHHhCCCe--E-EEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC---
Confidence 3667899999999999765 3 45567799999999888999999999988776653 224467789999999763
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|+++++++++ +++|+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+. .++....++|+++.|+
T Consensus 120 --d~e~l~~~l~----~~tklV~vesp~NptG~v~dl~~I~~la~~--~gi~livD~t~a~~~-~~~~~~~gaDivv~S~ 190 (397)
T PRK05939 120 --DVQNVAAAIR----PNTRMVFVETIANPGTQVADLAGIGALCRE--RGLLYVVDNTMTSPW-LFRPKDVGASLVINSL 190 (397)
T ss_pred --CHHHHHHhCC----CCCeEEEEECCCCCCCCHHhHHHHHHHHHH--cCCEEEEECCccccc-ccCccccCCEEEEecC
Confidence 7899999997 577999999999999999999999999999 999999999987653 3455556899999999
Q ss_pred CCcccCCCc-ceeeeeC
Q 017726 200 QKALSLPTG-MGIVCAS 215 (367)
Q Consensus 200 ~K~~~g~~g-~g~~~~~ 215 (367)
+|+++|... +|.++..
T Consensus 191 sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 191 SKYIAGHGNALGGAVTD 207 (397)
T ss_pred eecccCCCCeEEEEEec
Confidence 999986433 3555443
No 239
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=5.8e-22 Score=175.21 Aligned_cols=290 Identities=16% Similarity=0.159 Sum_probs=203.4
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHH
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~ 98 (367)
+.+.-++++.+...+.+-.. +....++++.+++++|.+. .+.++|||.|+.+++.++ +.|||.||++...+.+..
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~~v~~FE~~~ae~~G~k~---ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa 88 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GPFVRRFEQAFAEYLGVKY---AVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA 88 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-ChHHHHHHHHHHHHhCCCe---EEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH
Confidence 55666666666544433111 4778899999999999887 577899999999999854 799999999977655542
Q ss_pred HHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
......|++++.|+++++ +.+|++.+|++|+ ++||+|+.+|. .|...|+++|.++|++ ||++||+|++
T Consensus 89 --n~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt----~~tKAIipVhl---~G~~~dm~~i~~la~~--~~l~vIEDaA 157 (374)
T COG0399 89 --NAVLLVGAKPVFVDIDPDTLNIDPDLIEAAIT----PRTKAIIPVHL---AGQPCDMDAIMALAKR--HGLPVIEDAA 157 (374)
T ss_pred --HHHHHcCCeEEEEecCCcccCCCHHHHHHHcc----cCCeEEEEehh---ccCCCCHHHHHHHHHH--cCCeEEEEcc
Confidence 445678999999999965 7899999999999 57899999985 7999999999999999 9999999999
Q ss_pred eccCceeecccc---c-cceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcH
Q 017726 178 SSICAIDFRMDE---W-GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSI 253 (367)
Q Consensus 178 ~~~~~~~~~~~~---~-~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (367)
|++|+.- .... . ++-+..+...|.+.+..|..++.-++++.++++..+..+...+........+.|. ...+
T Consensus 158 qa~Ga~y-~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~----N~rm 232 (374)
T COG0399 158 QAHGATY-KGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGY----NYRL 232 (374)
T ss_pred hhccCee-cCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeeccc----ccCH
Confidence 9998752 2111 1 2456666678999777664444456666776665433222110000000001121 1222
Q ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCC-CccCCCceEEEEcCCC-CCHHHHHHHHHhhC
Q 017726 254 QLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK-EEWFSDTVTAVIVPSH-INSSEIVRRAWQRY 330 (367)
Q Consensus 254 ~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~ 330 (367)
-.+++|+.+.+-+.++++.++.+++++.+.+.|++. ++.+.... ....++.+..+.+++. .+-+.+.+.|+++
T Consensus 233 ---~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~- 308 (374)
T COG0399 233 ---TEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEA- 308 (374)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhC-
Confidence 346777777766668889999999999999999987 54443332 2234566666776543 6678899999755
Q ss_pred CeE
Q 017726 331 NLS 333 (367)
Q Consensus 331 gv~ 333 (367)
||.
T Consensus 309 gi~ 311 (374)
T COG0399 309 GVG 311 (374)
T ss_pred CCC
Confidence 554
No 240
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.91 E-value=7.1e-22 Score=180.46 Aligned_cols=274 Identities=14% Similarity=0.140 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC-
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG- 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~- 118 (367)
....+++++.+++++|.+ .+++++||++|+.+++.++ +.+||+|+++.+.|.+.. ..+...|++++.++++.+
T Consensus 30 ~~~~~~~e~~la~~~g~~---~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~--~~~~~~G~~~v~~d~d~~~ 104 (375)
T PRK11706 30 GGFTRRCQQWLEQRFGSA---KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA--NAFVLRGAKIVFVDIRPDT 104 (375)
T ss_pred CHHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH--HHHHHcCCEEEEEecCCCc
Confidence 356778899999999874 3889999999998877654 789999999999877653 456778999999998866
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccc--cceEEE
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEW--GIDVAL 196 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~--~~d~~~ 196 (367)
+.+|+++++++++ +++|+|++++ ++|...|+++|.++|++ +|++||+|++|+++.. .+.... ..|+-+
T Consensus 105 ~~~d~~~le~~i~----~~tk~i~~~~---~~G~~~~~~~i~~la~~--~~i~vIeD~a~a~g~~-~~~~~~g~~~~~~~ 174 (375)
T PRK11706 105 MNIDETLIEAAIT----PKTRAIVPVH---YAGVACEMDTIMALAKK--HNLFVVEDAAQGVMST-YKGRALGTIGHIGC 174 (375)
T ss_pred CCcCHHHHHHhcC----CCCeEEEEeC---CCCCccCHHHHHHHHHH--cCCEEEEECccccccc-cCCeeeecCcCEEE
Confidence 4789999999997 4679998764 69999999999999999 9999999999998763 111111 246677
Q ss_pred ecCC--CcccCCCcceeeeeCHHHHHHhccCCCCceeec-hHH-HHHH---hhcCCccCCCCcHHHHHHHHHHHHHHHHh
Q 017726 197 TGSQ--KALSLPTGMGIVCASPKALEASKTAKSVRVFFD-WKD-YIKF---YNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (367)
Q Consensus 197 ~s~~--K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~---~~~~~~~~~~~~~~~~~al~~al~~~~~~ 269 (367)
+|+| |.+..+.|.+++..++++.+++......+...+ ... .... ...|. ...++ .+.+++...+-.
T Consensus 175 ~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~--~~~~~-----~~~aa~~~~ql~ 247 (375)
T PRK11706 175 FSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGS--SYLPS-----ELQAAYLWAQLE 247 (375)
T ss_pred EeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeeccc--ccCcC-----HHHHHHHHHHHH
Confidence 7766 999655554566667788776654432110000 000 0000 00111 11111 233344433333
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHcC----Ccccc-CCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccC
Q 017726 270 GLENVIERHRRLGKATRLAVEAWG----LKNCT-QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG 337 (367)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g 337 (367)
.+++..++.+++.+.+.+.|++.. +.+.. +......+.++++.++++.+.+++.+.|.++ ||.++..
T Consensus 248 ~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-gI~~~~~ 319 (375)
T PRK11706 248 AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDLEDRSALINFLKEA-GIMAVFH 319 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCcCCHHHHHHHHHHC-CCCcccc
Confidence 367778888889999999988752 22211 2122234445667775556788999999765 9987644
No 241
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=5e-22 Score=179.48 Aligned_cols=277 Identities=16% Similarity=0.098 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHH-HHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQ-QQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~-~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|.+ .++.++||++|+.+++. ++.+||+|+++.+.|.+.. +... ....++++ .
T Consensus 53 ~p~~~~le~~lA~leg~~---~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~-------~ 121 (364)
T PRK07269 53 NPTRAKLEETLAAIESAD---YALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF-------T 121 (364)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE-------E
Confidence 355789999999999854 37888999999998884 5789999999988766543 2121 12112211 1
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+..|+++++++++ ++||+|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|++++|
T Consensus 122 ~~~d~~~l~~~i~----~~TklV~lesP~NPtg~~~di~~I~~la~~--~gi~vvvD~t~~~~~~~-~pl~~gaDivv~S 194 (364)
T PRK07269 122 YANTEEELIAAIE----EDTDIVYIETPTNPLMVEFDIEKVAKLAHA--KGAKVIVDNTFYSPIYQ-RPIELGADIVLHS 194 (364)
T ss_pred ecCCHHHHHHhcC----cCceEEEEECCCCCCCeeeCHHHHHHHHHH--cCCEEEEECCCcccccC-CchhhCCcEEEec
Confidence 2247899999997 467999999999999999999999999999 99999999997654322 2234589999999
Q ss_pred CCCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
.+|+++|+.. .|+++. ++++.+++.... ...|. ..+.. .+++....-..++.++
T Consensus 195 ~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~--------------~~~G~----~~s~~-----~a~l~~~~L~tL~~r~ 251 (364)
T PRK07269 195 ATKYLSGHNDVLAGVVVTNDLELYEKLFYNL--------------NTTGA----VLSPF-----DSYLLMRGLKTLSLRM 251 (364)
T ss_pred CceeccCCCcccceEEEeCcHHHHHHHHHHH--------------HHhCC----CCCHH-----HHHHHHcCCCcHHHHH
Confidence 9999987554 377676 455665554210 01121 23332 2222222222377888
Q ss_pred HHHHHHHHHHHHHHHHc-CC-ccccCCCccCCCceEEEEcCCCC-CHHHHHHHHHh---------hCCeEEccCCCC---
Q 017726 276 ERHRRLGKATRLAVEAW-GL-KNCTQKEEWFSDTVTAVIVPSHI-NSSEIVRRAWQ---------RYNLSLGLGLNK--- 340 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~---------~~gv~v~~g~~~--- 340 (367)
++.++++..+.+.|++. ++ .+.-| ..+.+++|.+. +. ....|.+.|.- ...+.+.|....
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~v~yp----g~gg~~sf~~~-~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~ 326 (364)
T PRK07269 252 ERSTANAQEVVAFLKKSPAVKEVLYT----GKGGMISFKVA-DETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHAD 326 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEeCC----CcCcEEEEEEC-CHHHHHHHHHhCCcceEccCCCCcCeEeeCCccccccc
Confidence 89999999999999987 54 33323 13457888873 21 12234433321 011222221110
Q ss_pred ----------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 341 ----------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 341 ----------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
..++.||+| .|-++.+|+..++-
T Consensus 327 ~~~~~r~~~Gi~~~liRls-vGlE~~~dli~dl~ 359 (364)
T PRK07269 327 IPAEVRHSYGLTDDLLRLS-IGIEDARDLIADLK 359 (364)
T ss_pred CCHHHHHhcCCCCCeEEEE-eccCCHHHHHHHHH
Confidence 113469998 57778888876654
No 242
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=6.2e-22 Score=182.03 Aligned_cols=289 Identities=16% Similarity=0.127 Sum_probs=193.5
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCCCC--C-----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYRS--P-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT 80 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~--~-----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~ 80 (367)
+..+.+..|-.++++++++++.+....+.. + .......++++.+++++|.+. .++++|++.|+.+++.+
T Consensus 81 g~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~---alvv~sg~aAi~l~l~~- 156 (454)
T TIGR00474 81 GVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED---ALVVNNNAAAVLLALNT- 156 (454)
T ss_pred CcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHH-
Confidence 356677788888999999999875443211 1 123557899999999999876 34568889999888854
Q ss_pred CCCCCeEEEEeCCcc----hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc--c--c
Q 017726 81 LSPGDRIISFLIGQF----SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--G--V 152 (367)
Q Consensus 81 ~~~gd~vl~~~~~~~----~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t--G--~ 152 (367)
+.+||+|++++..|. +..+...++..|++++.++.+. ..++++++++++ ++|++|++++++|++ | .
T Consensus 157 l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~----~~T~lv~~~h~sN~~~~G~~~ 230 (454)
T TIGR00474 157 LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT----ENTALLLKVHTSNYRIVGFTE 230 (454)
T ss_pred hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC----cCCEEEEEEccCcccccCCCC
Confidence 689999999987642 1233455677899999997643 357899999998 467999999999985 6 5
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeecc---------Ccee--eccccccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSI---------CAID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~---------~~~~--~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
+.|+++|.++||+ +|+++++|.+.+. ...+ .+....|+|++++|++|+++||. .|+++++++++++
T Consensus 231 ~~dl~~I~~la~~--~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~~i~~ 307 (454)
T TIGR00474 231 EVSIAELVALGRE--HGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIER 307 (454)
T ss_pred CCCHHHHHHHHHH--cCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHHHHHh
Confidence 7899999999999 9999999976332 1222 13445689999999999998775 6999999999887
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh--------C---hHHHHHHHHHHHHHHHHHHH
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE--------G---LENVIERHRRLGKATRLAVE 290 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~--------g---~~~~~~~~~~~~~~l~~~L~ 290 (367)
+...... ..+..+. ..++++.+++...... + +....++.++++..+.+.|+
T Consensus 308 l~~~~l~----------r~lr~~k--------~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~ 369 (454)
T TIGR00474 308 LKKNPLT----------RALRVDK--------LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLK 369 (454)
T ss_pred hhhchhH----------HHHhhCh--------HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHH
Confidence 6532110 1111111 1223344444333211 1 22334566677888888887
Q ss_pred Hc---C--CccccCC--------CccC-CCceEEEEcCCCCCHHHHHHHHHh
Q 017726 291 AW---G--LKNCTQK--------EEWF-SDTVTAVIVPSHINSSEIVRRAWQ 328 (367)
Q Consensus 291 ~~---g--~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 328 (367)
+. + ..+.... +... ....+.+. +.+.+..++.++|++
T Consensus 370 ~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~-~~~~~~~~l~~~lr~ 420 (454)
T TIGR00474 370 AALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLT-PDGLSAEKLEARLRE 420 (454)
T ss_pred hhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEe-cCCCCHHHHHHHHhc
Confidence 63 2 2333321 1111 12223333 346788999999964
No 243
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=1.1e-21 Score=180.48 Aligned_cols=163 Identities=18% Similarity=0.169 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|.+. .++++||+.|+.+++.+++.+||+|++++..|.+.. +...++..|+++..++ +.
T Consensus 68 ~pt~~~le~~la~l~g~~~---~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~~- 142 (437)
T PRK05613 68 NPTVEALENRIASLEGGVH---AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-NP- 142 (437)
T ss_pred ChHHHHHHHHHHHHhCCCe---EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-CC-
Confidence 4668899999999999853 345566779998888888899999999988888763 4456677899999997 22
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
.|+++++++++ +++++|++.++.||+|.+.|+++|.++|++ +|+++++|++++.+.. ......|+|++++|
T Consensus 143 --~d~e~l~~~l~----~~tk~V~~e~~~Np~~~v~di~~I~~la~~--~gi~livD~t~a~g~~-~~p~~~GaDivv~S 213 (437)
T PRK05613 143 --DDPESWQAAVQ----PNTKAFFGETFANPQADVLDIPAVAEVAHR--NQVPLIVDNTIATAAL-VRPLELGADVVVAS 213 (437)
T ss_pred --CCHHHHHHhCC----ccCeEEEEECCCCCCCcccCHHHHHHHHHH--cCCeEEEECCCccccc-cChHHhCCCEEEee
Confidence 27899999998 467999999999999999999999999999 9999999999977654 34445689999999
Q ss_pred CCCcccCCC-cc-eeeeeCHH
Q 017726 199 SQKALSLPT-GM-GIVCASPK 217 (367)
Q Consensus 199 ~~K~~~g~~-g~-g~~~~~~~ 217 (367)
+||+++|.. ++ |+++.+++
T Consensus 214 ~~K~l~G~gd~~gG~vv~~~~ 234 (437)
T PRK05613 214 LTKFYTGNGSGLGGVLIDGGK 234 (437)
T ss_pred ccceecCCCcceeEEEEecCc
Confidence 999997542 33 44544433
No 244
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=2.5e-21 Score=178.86 Aligned_cols=275 Identities=19% Similarity=0.187 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-CeEEEEeCCcchHHHHHHHHHhCC------------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNF------------ 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~------------ 108 (367)
....++.+.++++++.+..+.+++++||++|+..++.....+| +.|+...++|++..... ....|.
T Consensus 85 ~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~-~~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 85 EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGA-LALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHH-HhccCCcccccCCCCCCC
Confidence 3346899999999886533569999999999999988654455 46777767777753211 111221
Q ss_pred ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-
Q 017726 109 NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI- 183 (367)
Q Consensus 109 ~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~- 183 (367)
++..+|. .|++++++++. +++++|++++++||+|.+.| +++|.++|++ +|+++|+|++++....
T Consensus 164 ~~~~~~~-----~d~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~--~~~llI~DEv~~g~gr~ 232 (398)
T PRK03244 164 GVEHVPY-----GDVDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDR--HGALLVLDEVQTGIGRT 232 (398)
T ss_pred CceEeCC-----CCHHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCccc
Confidence 2223332 27899998885 46799999999999999987 8899999999 9999999999863221
Q ss_pred ----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHH
Q 017726 184 ----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (367)
Q Consensus 184 ----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 259 (367)
.+.......|++++ +|+++++.++|++++++++++.+..... +. .+..+...+.+.
T Consensus 233 g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~~~~~~~~~~~----------------~~--t~~~~~~~~aaa 292 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGPAADLLTPGLH----------------GS--TFGGNPVACAAA 292 (398)
T ss_pred chHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHHHHhhccCCCC----------------cC--CCCCCHHHHHHH
Confidence 11222334677644 7999765568999999998776653211 11 234556566666
Q ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCC
Q 017726 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLN 339 (367)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~ 339 (367)
.++++.+.+. +..++..++.+++.+.|++++++....-. ..+.++++.++. ....++.+.|.++ ||.+.+.
T Consensus 293 ~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~--g~g~~~~i~~~~-~~~~~~~~~l~~~-Gv~~~~~-- 363 (398)
T PRK03244 293 LAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVR--GRGLLLGIVLTA-PVAKAVEAAAREA-GFLVNAV-- 363 (398)
T ss_pred HHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEe--eccEEEEEEEec-cHHHHHHHHHHHC-CeEEeec--
Confidence 6677766554 34567788889999999987644332111 144567777742 2456788888755 9999763
Q ss_pred CCCCcEEEEeecCCCCHHHH
Q 017726 340 KVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 340 ~~~~~~iRi~~~~~~~~~~~ 359 (367)
..+.+|+++....+++|+
T Consensus 364 --~~~~iR~~p~~~~t~~~i 381 (398)
T PRK03244 364 --APDVIRLAPPLIITDAQV 381 (398)
T ss_pred --CCCEEEEECCCcCCHHHH
Confidence 236799997776655443
No 245
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=3.8e-21 Score=177.42 Aligned_cols=158 Identities=18% Similarity=0.174 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. .++++||+.|+..++.+++.+||+|+++.+.|.+.. +...+...|++++.++..
T Consensus 63 p~~~~le~~lA~l~g~~~---al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (427)
T PRK05994 63 PTNAVLEERVAALEGGTA---ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--- 136 (427)
T ss_pred ccHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC---
Confidence 456789999999999765 467799999999999989999999999999887753 445567789999988754
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|+++.|.
T Consensus 137 --d~~~l~~ai~----~~tklV~vesp~NptG~v~dl~~I~~la~~--~gi~livD~a~a~~~~~-~pl~~gaDivv~S~ 207 (427)
T PRK05994 137 --DPASFERAIT----PRTKAIFIESIANPGGTVTDIAAIAEVAHR--AGLPLIVDNTLASPYLI-RPIEHGADIVVHSL 207 (427)
T ss_pred --CHHHHHHhcC----cCCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCccccccC-CccccCCcEEEEcC
Confidence 7899999987 467999999999999999999999999999 99999999999865432 33356899999999
Q ss_pred CCcccCCCc-ceeeee
Q 017726 200 QKALSLPTG-MGIVCA 214 (367)
Q Consensus 200 ~K~~~g~~g-~g~~~~ 214 (367)
+|+++|+.+ +|.+++
T Consensus 208 tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 208 TKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCCCCcEEEEEE
Confidence 999986654 344443
No 246
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.1e-21 Score=180.33 Aligned_cols=159 Identities=18% Similarity=0.116 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
....++++.++++.|.+. .++++||+.|+..++.+++.+||+|++....|.+.. +...+...|++++.++ +.
T Consensus 69 p~~~~Le~~lA~l~g~~~---av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~-- 142 (436)
T PRK07812 69 PTQDVVEQRIAALEGGVA---ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP-- 142 (436)
T ss_pred chHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence 556799999999999765 467788999999999999999999999988776643 3344566788888885 22
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
.|+++++++++ +++++|++.+++||+|.+.|+++|.++||+ +|+++++|++++.+....+ ...++|+++.|+
T Consensus 143 -~d~e~l~~ai~----~~tklV~ie~~sNp~G~v~Dl~~I~~la~~--~gi~liVD~t~a~~~~~~p-l~~GaDivv~S~ 214 (436)
T PRK07812 143 -DDLDAWRAAVR----PNTKAFFAETISNPQIDVLDIPGVAEVAHE--AGVPLIVDNTIATPYLIRP-LEHGADIVVHSA 214 (436)
T ss_pred -CCHHHHHHhCC----CCCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcccccCCc-hhcCCCEEEEec
Confidence 28999999887 467999999999999999999999999999 9999999999876544323 346899999999
Q ss_pred CCcccCCCc-ceeeee
Q 017726 200 QKALSLPTG-MGIVCA 214 (367)
Q Consensus 200 ~K~~~g~~g-~g~~~~ 214 (367)
+|+++|..+ +|.+++
T Consensus 215 tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 215 TKYLGGHGTAIAGVIV 230 (436)
T ss_pred ccccCCCCCeEEEEEE
Confidence 999975533 444444
No 247
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.90 E-value=3.3e-22 Score=180.72 Aligned_cols=294 Identities=17% Similarity=0.147 Sum_probs=196.6
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCC------ceEEecCChhHHHHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSG------TPFLIPTTGTGAWESAL 77 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~------~~v~~~~ggt~al~~~~ 77 (367)
+.+.+.+++...+.-+.+.+....+. ..+|.......++.+++++++|.+.+ -.-++|+|||+++..++
T Consensus 41 ~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al 120 (373)
T PF00282_consen 41 RFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYAL 120 (373)
T ss_dssp TBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHH
T ss_pred hHhhhccCCccHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHH
Confidence 55666676655444444444443222 22455677888999999999999821 24689999999998877
Q ss_pred HccC--------C-----CCC-eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEE
Q 017726 78 TNTL--------S-----PGD-RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAI 141 (367)
Q Consensus 78 ~~~~--------~-----~gd-~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv 141 (367)
.+.. . .++ .|+++...|++ +.+.+..+|+.++.||+++++++|+++|++++++... ..+-+|
T Consensus 121 ~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S--~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~v 198 (373)
T PF00282_consen 121 LAARERALPRSKAKGVEEIPKPVIYVSEQAHYS--IEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAV 198 (373)
T ss_dssp HHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH--HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHhhhhhhcccccccccccccccccccH--HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceee
Confidence 4321 0 122 35555556776 4588999999999999999999999999999876321 124477
Q ss_pred EEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee------ccccccceEEEecCCCcccCCCcceeeeeC
Q 017726 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF------RMDEWGIDVALTGSQKALSLPTGMGIVCAS 215 (367)
Q Consensus 142 ~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~ 215 (367)
+.+...+.+|.+.|+++|.++|++ +++|+++|++++...+.. ...-..+|.++.++|||+..|.++|+++.+
T Consensus 199 vat~Gtt~~Ga~D~l~~i~~i~~~--~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r 276 (373)
T PF00282_consen 199 VATAGTTNTGAIDPLEEIADICEK--YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVR 276 (373)
T ss_dssp EEEBS-TTTSBB-SHHHHHHHHHH--CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEES
T ss_pred eccCCCcccccccCHHHHhhhccc--cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEee
Confidence 888999999999999999999999 999999999988643321 112236899999999999999999999988
Q ss_pred HHH-HHHhccCCCCceeechH--HHHHHhhcCCc-cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Q 017726 216 PKA-LEASKTAKSVRVFFDWK--DYIKFYNLGTF-WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (367)
Q Consensus 216 ~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (367)
.+. +...... ...|+... ........+.+ ..++. -...+.++.+++.+..+|+.+++++..++++++.+.|++
T Consensus 277 ~~~~l~~~~~~--~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 277 DKSDLRDAFSI--NADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp SGGGHHGGGEE--EETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHhcc--Chhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 764 3322211 11111100 00000111111 11122 445578888899999999999999999999999999999
Q ss_pred c-CCccccCCCccCCCceEEEEc
Q 017726 292 W-GLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 292 ~-g~~~~~~~~~~~~~~~~~~~~ 313 (367)
. +++++.+ ....+++|+.
T Consensus 354 ~~~~el~~~----~~~~~vcFr~ 372 (373)
T PF00282_consen 354 DPRFELVNE----PDLNIVCFRY 372 (373)
T ss_dssp STTEEESST----TSSSEEEEEE
T ss_pred CCCEEEEcC----CCceEEEEEe
Confidence 8 6888775 4556788876
No 248
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.90 E-value=2.7e-21 Score=190.42 Aligned_cols=305 Identities=13% Similarity=0.105 Sum_probs=218.5
Q ss_pred CChHHHHHHHccCCCC---CC--CC----cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCC--CCe
Q 017726 19 HIPDQVIRAMNRNNED---YR--SP----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSP--GDR 86 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~---~~--~~----~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~--gd~ 86 (367)
.+|..+++++.+...- +. .+ +..+...++++.+++++|++.++ +.++.++|.+.+.++.+. +.+ +++
T Consensus 116 ~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~an-aSL~d~aTAaaea~~~a~~~~~g~~~~ 194 (993)
T PLN02414 116 HVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSN-ASLLDEGTAAAEAMAMCNNILKGKKKK 194 (993)
T ss_pred cCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhh-EeecCChHHHHHHHHHHHhcccCCCCE
Confidence 4788887888875431 11 11 23455778999999999998765 888899999998777654 444 478
Q ss_pred EEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 87 IISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 87 vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
|++++..|+++. +...++..|++++.++.+.. + ... ..+ ..++++..|.+|.+.|+++|.++||
T Consensus 195 VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~----~~v-~~vlvq~P~~~G~v~dv~~I~~~ah 260 (993)
T PLN02414 195 FLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS----GDV-CGVLVQYPATDGEVLDYAEFVKNAH 260 (993)
T ss_pred EEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc----Cce-EEEEEecCCCCeEEcCHHHHHHHHH
Confidence 999999999875 56677889999999987531 1 111 111 2344666678999999999999999
Q ss_pred hcCCCcEEEEeeeeccCceee-ccccccceEEEecCCCcccCCCc-----ceeeeeCHHHHHHhccCCCCceee------
Q 017726 165 EYRHPALFLVDGVSSICAIDF-RMDEWGIDVALTGSQKALSLPTG-----MGIVCASPKALEASKTAKSVRVFF------ 232 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~~-~~~~~~~d~~~~s~~K~~~g~~g-----~g~~~~~~~~~~~~~~~~~~~~~~------ 232 (367)
+ +|+++++ +++..+...+ ++.++|+||+++++|||. +|.| .|++++++++.+.+.....+ +..
T Consensus 261 ~--~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG-~s~d~~g~~ 335 (993)
T PLN02414 261 A--NGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIG-VSVDSSGKP 335 (993)
T ss_pred H--cCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccC-cccCCCCCc
Confidence 9 9999999 8777766666 477889999999999997 3433 79999999987755432221 111
Q ss_pred ------chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHH-----HHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Q 017726 233 ------DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-----IFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKE 301 (367)
Q Consensus 233 ------~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~-----~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 301 (367)
....+..|++.++ +|+....++.+++.. +...|++++.+++.+++.++.+.|++.|+++..+
T Consensus 336 ~~~l~LqtReqhiRrEkaT-----sNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~-- 408 (993)
T PLN02414 336 ALRMAMQTREQHIRRDKAT-----SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSL-- 408 (993)
T ss_pred ccccccccccchhhhcccc-----cchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCC--
Confidence 1223334566554 777555666666543 3457899999999999999999998889887654
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. ... .+.|+++ +..++.++|.++ ||.++... ++.+|+|++.+++.+|++
T Consensus 409 ~-~f~-~vt~~~~---~~~~v~~~L~~~-gI~l~~~~----~~~lrvs~~e~~T~edId 457 (993)
T PLN02414 409 P-FFD-TVKVKCS---DADAIADAAAKV-GINLRVVD----ANTVTVSFDETTTLEDVD 457 (993)
T ss_pred C-CcC-eEEEecC---CHHHHHHHHHHC-CCeeEEec----CCeEEEEeeccCCHHHHH
Confidence 2 222 5667764 457899999755 98776432 356999998887766544
No 249
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.90 E-value=2.5e-21 Score=168.01 Aligned_cols=288 Identities=17% Similarity=0.104 Sum_probs=211.5
Q ss_pred CcHHHHHHHHHHHHHHHhc----CC--CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 38 PAVPALTKTLLEDIKKIFK----TT--SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 38 ~~~~~~~~~~~~~la~~~~----~~--~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
|+...+..++...+.++.+ .+ .+.++++|+|.|.++..+++.+++.||.|++....+.+. ....+..|++++
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~A--L~s~~a~gv~~i 173 (472)
T KOG0634|consen 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSA--LQSMEALGVKII 173 (472)
T ss_pred cccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHH--HHhccccCceEE
Confidence 3444556677777777555 22 334599999999999999999999999999987766553 355678899999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCC-----CCccEE-EEEecCCCccccccH---HHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 112 VVESDWGEGAKLDVLASKLAADTA-----HTIKAI-CIVHNETATGVTNNL---SKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~-----~~~~lv-~~~~~~n~tG~~~~~---~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
.|+++.++ +++|.+++.++.... ++++++ .+.+.+||||..++. ++|.++|++ |+.+||+|+.|.+..
T Consensus 174 pv~md~~G-i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArK--yDfLIVeDdpYy~Lq 250 (472)
T KOG0634|consen 174 PVKMDQDG-IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARK--YDFLIVEDDPYYFLQ 250 (472)
T ss_pred eccccCCC-CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHH--cCEEEEecCccceee
Confidence 99987655 799999999887431 456766 667889999999874 579999999 999999999876544
Q ss_pred ee--------------------------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 183 ID--------------------------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 183 ~~--------------------------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
+. .+.+-.|..+-..|+||.++.+.++|++.+++..++++....
T Consensus 251 ~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~a---------- 320 (472)
T KOG0634|consen 251 MNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLA---------- 320 (472)
T ss_pred ccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhc----------
Confidence 33 112223667888899999976667899999998888776431
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHc---C-CccccCCCccCCCce
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG----LENVIERHRRLGKATRLAVEAW---G-LKNCTQKEEWFSDTV 308 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g----~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~~~~~ 308 (367)
+..+ . .|+-.....+.+.++.+.++| +.+++..+...+..+..+|.+. + +++.+| .++.+
T Consensus 321 -----e~~t--~-~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P----~aGmF 388 (472)
T KOG0634|consen 321 -----EVAT--S-GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPP----KAGMF 388 (472)
T ss_pred -----ceee--c-CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecC----CcceE
Confidence 1111 1 133333355667777777766 6667778888889999999884 4 566677 78889
Q ss_pred EEEEcC-------CCCC-HHHHHHHHHhhCCeEEccCCCCC------CCc-EEEEeecC
Q 017726 309 TAVIVP-------SHIN-SSEIVRRAWQRYNLSLGLGLNKV------AGK-VFRIGHLG 352 (367)
Q Consensus 309 ~~~~~~-------~~~~-~~~l~~~L~~~~gv~v~~g~~~~------~~~-~iRi~~~~ 352 (367)
+|++++ ++++ .+++......++||.+..|..+. .++ ++|+++..
T Consensus 389 iwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~ 447 (472)
T KOG0634|consen 389 IWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAF 447 (472)
T ss_pred EEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeec
Confidence 999996 5565 66777767778899999885421 134 79998643
No 250
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.90 E-value=3.1e-21 Score=178.02 Aligned_cols=161 Identities=17% Similarity=0.176 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.+++++|.+. .++++||+.|+..++.+++.+||+|+++++.|.+.. +...++..|++++.++.+
T Consensus 56 ~p~~~~le~~lA~l~g~~~---~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~-- 130 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGVA---ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD-- 130 (418)
T ss_pred ChhHHHHHHHHHHHhCCCe---EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC--
Confidence 3556899999999999643 688899999999999888999999999998776643 445677889999998753
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|+++.|
T Consensus 131 ---d~~~l~~~l~----~~t~~V~le~p~NPtg~v~dl~~I~~la~~--~~i~livD~t~~~~~~~-~~l~~g~Divv~S 200 (418)
T TIGR01326 131 ---DPEEFEKAID----ENTKAVFAETIGNPAINVPDIEAIAEVAHA--HGVPLIVDNTFATPYLC-RPIDHGADIVVHS 200 (418)
T ss_pred ---CHHHHHHhcC----cCCeEEEEECCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCchhhcC-CchhcCCeEEEEC
Confidence 7999999987 467999999999999999999999999999 99999999999765322 2224579999999
Q ss_pred CCCcccCCC-cceeeeeCH
Q 017726 199 SQKALSLPT-GMGIVCASP 216 (367)
Q Consensus 199 ~~K~~~g~~-g~g~~~~~~ 216 (367)
++|+++|+. .+|++++++
T Consensus 201 ~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 201 ATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ccccccCCccceEEEEEec
Confidence 999997532 257777654
No 251
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-21 Score=167.91 Aligned_cols=297 Identities=14% Similarity=0.107 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHhc----CC---CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeC
Q 017726 43 LTKTLLEDIKKIFK----TT---SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (367)
Q Consensus 43 ~~~~~~~~la~~~~----~~---~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (367)
+..++|+++|+++. .. +++.+++++|+|.|++.++..+.+|||..+++.|-|++.- ..+.-+.|++++.|.+
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfd-rdl~~rTgveivpv~c 200 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFD-RDLRWRTGVEIVPVHC 200 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccc-ccceeccCceEEEEEe
Confidence 35567777777653 22 4567999999999999999999999999999999666542 2344457899988887
Q ss_pred CC--CCCCCHHHHHHHHhcc--CCCCccEEEEEecCCCccccccHHH---HHHHHHhcCCCcEEEEeeeeccCcee----
Q 017726 116 DW--GEGAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNNLSK---VRKLLDEYRHPALFLVDGVSSICAID---- 184 (367)
Q Consensus 116 ~~--~~~~d~e~l~~~i~~~--~~~~~~lv~~~~~~n~tG~~~~~~~---i~~~~~~~~~~~~vi~D~~~~~~~~~---- 184 (367)
.. +.+++.+.+|+++.+. ...++|.|++++|+||.|++++.++ +.+++++ +|+-||+|+.|+.....
T Consensus 201 ~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~--kniHvI~DEIya~sVF~~~~F 278 (471)
T KOG0256|consen 201 SSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASR--KNIHVISDEIYAGSVFDKSEF 278 (471)
T ss_pred ecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhh--cceEEEeehhhcccccCccCc
Confidence 64 4578999998887762 1268999999999999999998655 5666667 99999999998754321
Q ss_pred ec-------cc-cccceEEEecCCCcccCCCcc--eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHH
Q 017726 185 FR-------MD-EWGIDVALTGSQKALSLPTGM--GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQ 254 (367)
Q Consensus 185 ~~-------~~-~~~~d~~~~s~~K~~~g~~g~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (367)
.+ .. ..+..-++.|.+|-| |.+|. |+++...+.+-........ + + .-++...
T Consensus 279 ~Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS~ne~VvsaA~kmss-f-------------~---~vSs~tQ 340 (471)
T KOG0256|consen 279 RSVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYSNNEDVVSAATKMSS-F-------------G---LVSSQTQ 340 (471)
T ss_pred eEHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEecChHHHHHHHHHhh-c-------------c---CCcHHHH
Confidence 01 11 123446788999999 57774 8898766654443322110 0 0 0011111
Q ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCC---C---HHHHHHHHHh
Q 017726 255 LLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHI---N---SSEIVRRAWQ 328 (367)
Q Consensus 255 ~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~l~~~L~~ 328 (367)
-+++....=+++.+.-+.+..+|+...-+++.+.|+++|+++... .++.++|+++..-. + .-+|.+++.+
T Consensus 341 ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s----~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~ 416 (471)
T KOG0256|consen 341 YLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKS----NAGLFCWVDLRKLLTSLTFEGELELWERILD 416 (471)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeec----CCeeEEEEEhHHhcCcCChHHHHHHHHHHHH
Confidence 111111111233333377788888999999999999999999987 67778888873211 1 2357888888
Q ss_pred hCCeEEccCCC--CCCCcEEEEeecCCCCH-HHHHHhhh
Q 017726 329 RYNLSLGLGLN--KVAGKVFRIGHLGHLNE-VMFNFQLL 364 (367)
Q Consensus 329 ~~gv~v~~g~~--~~~~~~iRi~~~~~~~~-~~~~~~~l 364 (367)
+-++.+.||.. +..++++|+++.+..++ .++..+.|
T Consensus 417 ~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri 455 (471)
T KOG0256|consen 417 NVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRL 455 (471)
T ss_pred hhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHH
Confidence 77999999965 45678999998775443 44344433
No 252
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=1.3e-21 Score=180.10 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.....++++.++++.|.+. .++++||++|+..++.+++.+||+|++..+.|.+.. +.......|+++..++.
T Consensus 57 ~pt~~~Le~~lA~l~g~~~---~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~--- 130 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVG---ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH--- 130 (425)
T ss_pred CchHHHHHHHHHHHhCCCc---eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC---
Confidence 3556799999999999643 467789999999999999999999999988777543 22222335666666653
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
.|+++++++++ +++++|++++|+||+|.+.|+++|.++|++ +|+++++|++++.+... .....++|++++|
T Consensus 131 --~d~e~le~ai~----~~tklV~lesp~NPtG~v~dl~~I~~la~~--~~i~vVvD~a~a~~~~~-~p~~~gaDivv~S 201 (425)
T PRK06084 131 --DDIAALEALID----ERTKAVFCESIGNPAGNIIDIQALADAAHR--HGVPLIVDNTVATPVLC-RPFEHGADIVVHS 201 (425)
T ss_pred --CCHHHHHHHhc----cCCcEEEEeCCCCCCCeecCHHHHHHHHHH--cCCEEEEECCCcccccC-ChhhcCCCEEEEC
Confidence 38999999997 467999999999999999999999999999 99999999999865443 2234589999999
Q ss_pred CCCcccCCCc-c-eeeeeCH
Q 017726 199 SQKALSLPTG-M-GIVCASP 216 (367)
Q Consensus 199 ~~K~~~g~~g-~-g~~~~~~ 216 (367)
++|+++|+.. + |+++.++
T Consensus 202 ~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 202 LTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred chhcccccccceeEEEEeCC
Confidence 9999986533 3 4444433
No 253
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.90 E-value=4.9e-21 Score=189.51 Aligned_cols=286 Identities=15% Similarity=0.063 Sum_probs=207.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCC--CCeEEEEeCCcchHH--HHHHHHHhCCceEEEe
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSP--GDRIISFLIGQFSLL--WIDQQQRLNFNVDVVE 114 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~--gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 114 (367)
..+...++++.++++.|++..+ +.+..++|.+.+.++.++ +.+ +++|++++..|++.. +...++..|++++.++
T Consensus 119 ~Leal~~~Qt~la~LtG~~~an-aSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~ 197 (954)
T PRK05367 119 RLEALLNFQTMVADLTGLEIAN-ASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGD 197 (954)
T ss_pred HHHHHHHHHHHHHHHHCCChhh-ccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEec
Confidence 3455778999999999998765 788899998888777664 344 489999999998875 5566788999999998
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceE
Q 017726 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDV 194 (367)
Q Consensus 115 ~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~ 194 (367)
.+.+ .+ . .++.. ++.+..|.+|.+.|+++|.++||+ +|+++++|+.+..+....++.++|+||
T Consensus 198 ~~~d----~~------~----~~~~~-vlvq~p~~~G~i~d~~~i~~~ah~--~Gal~~vda~~~Al~~l~~pge~GaDi 260 (954)
T PRK05367 198 AAKA----LD------H----DDVFG-VLLQYPGTSGEVRDYTALIAAAHA--RGALVAVAADLLALTLLTPPGEMGADI 260 (954)
T ss_pred CccC----CC------c----ccEEE-EEEecCCCCeeeccHHHHHHHHHH--cCCEEEEEehhhhccCCCChhhcCCCE
Confidence 7542 11 1 23333 455557899999999999999999 999999999775544445778889999
Q ss_pred EEecCCCc-----ccCCCcceeeeeCHHHHHHhccCCCCceeec------------hHHHHHHhhcCCccCCCCcHHHH-
Q 017726 195 ALTGSQKA-----LSLPTGMGIVCASPKALEASKTAKSVRVFFD------------WKDYIKFYNLGTFWPYTPSIQLL- 256 (367)
Q Consensus 195 ~~~s~~K~-----~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~- 256 (367)
+++++||| ++| ++.|++++++++.+++.+...+ +..+ ..++..+++.++ +|+...
T Consensus 261 ~vgs~qkfg~P~g~GG-P~aGflavr~~~~r~lpgrivG-~s~d~~g~~~~~lalqtReqhiRrekaT-----sNict~q 333 (954)
T PRK05367 261 AVGSAQRFGVPMGFGG-PHAAYFAVRDAYKRSMPGRIVG-VSVDAAGNPALRLALQTREQHIRREKAT-----SNICTAQ 333 (954)
T ss_pred EEeeCcccCCCCCCCC-CCEEEEEECHHHHhhCCCCeee-eecccCCCcccccccccccccccccccc-----cccchHH
Confidence 99999999 543 3689999999998888755432 1111 112223555554 444432
Q ss_pred --HHHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCe
Q 017726 257 --YGLRAAL--DLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNL 332 (367)
Q Consensus 257 --~al~~al--~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv 332 (367)
.++.+++ .++...|++++.++...++.++.+.|++.|+++..+ . ... .+.++++ .+..++.++|.++ ||
T Consensus 334 aL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~--~-~f~-~~~~~~~--~~~~~i~~~l~~~-gi 406 (954)
T PRK05367 334 VLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHD--S-FFD-TLTVEVG--GDAAAVLARALAA-GI 406 (954)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCC--C-CCC-eEEEeCC--CCHHHHHHHHHHC-Cc
Confidence 3333332 446778999999999999999999998888887654 2 222 4556663 3788999999755 98
Q ss_pred EEccCCCCCCCcEEEEeecCCCCHHHHHH
Q 017726 333 SLGLGLNKVAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 333 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~ 361 (367)
.++... +..+|+|++-+++.+|+..
T Consensus 407 ~~~~~~----~~~l~is~~e~~t~~did~ 431 (954)
T PRK05367 407 NLRRVD----DDHVGISLDETTTREDLAA 431 (954)
T ss_pred eecccc----CCEEEEEecccCCHHHHHH
Confidence 874321 4579999988887765543
No 254
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=5.5e-21 Score=163.85 Aligned_cols=307 Identities=13% Similarity=0.082 Sum_probs=197.8
Q ss_pred CChHHHHHHHccCC-CCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchH
Q 017726 19 HIPDQVIRAMNRNN-EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSL 97 (367)
Q Consensus 19 ~~~~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~ 97 (367)
.+.++++++|.+.. .....|+.++...++++.++++++. ..++|++|||.++++++.+.++||+.||+....|...
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~ 87 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK---EAALFVPSGTQANQLALAAHCQPGESVICHETAHIYT 87 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC---ceEEEecCccHHHHHHHHHhcCCCCeEEEecccccee
Confidence 34577899999876 3355677778899999999999998 2489999999999999999999999999988766554
Q ss_pred HHHHHHHHhC-CceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcE
Q 017726 98 LWIDQQQRLN-FNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPAL 171 (367)
Q Consensus 98 ~~~~~~~~~g-~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~ 171 (367)
.-....+.++ +....+.-.+++.+++|++++.+..... ..+.++++.+.+|-.|+++| +++|.++||+ +|+.
T Consensus 88 ~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~--~~l~ 165 (342)
T COG2008 88 DECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKE--HGLP 165 (342)
T ss_pred cccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHH--hCCc
Confidence 3122233333 3333333346889999999998885210 23445555555557799998 5568888898 9999
Q ss_pred EEEeeee---ccCceeeccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCc
Q 017726 172 FLVDGVS---SICAIDFRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (367)
Q Consensus 172 vi~D~~~---~~~~~~~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
+++|++= +.-.+..+.. ..++|+++++++|.++.|. -++++++.++++++..++ +...|.
T Consensus 166 LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~-gAiv~gn~~~~~~a~~~r-------------K~~Ggl- 230 (342)
T COG2008 166 LHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPV-GAIVFGNRDFAKRARRWR-------------KRAGGL- 230 (342)
T ss_pred eeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCccee-eeEEEcCHHHHHHHHHHH-------------HHhccc-
Confidence 9999862 2211112221 2379999999999986454 499999999998886431 111111
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHH
Q 017726 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRR 325 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (367)
..-..+++.+ ++..+++.-......+..+.+..|.+.|++. |+++..+ ...+++++++++ ...+.
T Consensus 231 ----~~k~r~laA~-~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~~-----~~i~~ 296 (342)
T COG2008 231 ----MRKARFLAAQ-GLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLPE-----SAIEA 296 (342)
T ss_pred ----HhhhhHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECCh-----HHHHH
Confidence 1111112222 3333333212222333344499999999975 9999886 233467788742 22244
Q ss_pred HHhhCCeEEccCCCCCCC-cEEEEeecCCCCHHHHH
Q 017726 326 AWQRYNLSLGLGLNKVAG-KVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 326 L~~~~gv~v~~g~~~~~~-~~iRi~~~~~~~~~~~~ 360 (367)
|... +.....|...... ..+|+.++-..+++|+.
T Consensus 297 l~~~-~~~~~~~~~~~~~~~~vRfvts~a~~~edv~ 331 (342)
T COG2008 297 LRLA-GALFYRGVLIGAHGEIVRFVTSWATSEEDVD 331 (342)
T ss_pred HHhh-chhheeeeeccCCCceEEEEeeccCCHHHHH
Confidence 4333 4333333222222 36999877766766665
No 255
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.90 E-value=6.8e-21 Score=175.02 Aligned_cols=283 Identities=16% Similarity=0.131 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---CC----CCCeEEEEeCCcchHHHHHHHHHhCCceE--
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LS----PGDRIISFLIGQFSLLWIDQQQRLNFNVD-- 111 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~~----~gd~vl~~~~~~~~~~~~~~~~~~g~~~~-- 111 (367)
.+...++++.+++++|.+ .+++++||++|+..++..+ .. ++++|+++++.|++.... +...+....
T Consensus 68 ~~~~~~l~~~la~~~g~~---~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~--~~~~~~~~~~~ 142 (379)
T TIGR00707 68 TEPQEELAEKLVEHSGAD---RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMG--ALSATGQPKYQ 142 (379)
T ss_pred CHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHH--HHHhcCChhhh
Confidence 366789999999999865 4899999999999888743 22 379999999987765321 111222111
Q ss_pred --EEeCCCCCCC----CHHHHHHHHhccCCCCccEEEEEecCCCcccc-cc---HHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 112 --VVESDWGEGA----KLDVLASKLAADTAHTIKAICIVHNETATGVT-NN---LSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 112 --~v~~~~~~~~----d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~-~~---~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
..+...+... |++++++.++ +++++|++++++|++|.. .+ +++|.++|++ +|+++++|++|+..
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~--~~~~~i~De~~~~~ 216 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKD--KDALLIFDEVQTGI 216 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCC
Confidence 1122222211 7899999987 467999998887788865 33 7889999999 99999999998732
Q ss_pred cee---e--ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHH
Q 017726 182 AID---F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (367)
Q Consensus 182 ~~~---~--~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (367)
... . .......|++ +++|.++++.++|++++++++++.+..... +. .++.+...+
T Consensus 217 ~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~~~~~~~~~~~~~----------------~~--~~~~~~~~~ 276 (379)
T TIGR00707 217 GRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGATLAKEEVAEAFTPGDH----------------GS--TFGGNPLAC 276 (379)
T ss_pred CccchhhhHHhcCCCCCEE--EEcccccCCcccEEEEEcHHHHhhhcCCCC----------------CC--CCCCCHHHH
Confidence 111 1 1112234655 458999755568999999998887764211 11 234566666
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEcc
Q 017726 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL 336 (367)
Q Consensus 257 ~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~ 336 (367)
.+..++++.+... +..++.+++++++++.|++.+....... ....+.++++.+++ +..++.+.|.++ ||.+.+
T Consensus 277 ~aa~aaL~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~g~~~~~~~~~--~~~~~~~~l~~~-Gv~v~~ 349 (379)
T TIGR00707 277 AAALAVLEVIEKE---RLLENVKEKGDYFKERLEELGKNYPNKE-VRGKGLMLGIELEA--PCKDIVKKALEK-GLLVNC 349 (379)
T ss_pred HHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhhCCCCc-cccCceEEEEEecC--cHHHHHHHHHHC-CcEEee
Confidence 7777777776543 4566778888888888887532221110 00234467777743 467899988655 999987
Q ss_pred CCCCCCCcEEEEeecCCCCH--HHHHHhhhh
Q 017726 337 GLNKVAGKVFRIGHLGHLNE--VMFNFQLLF 365 (367)
Q Consensus 337 g~~~~~~~~iRi~~~~~~~~--~~~~~~~l~ 365 (367)
+. .+++|++++...+. .+....+|+
T Consensus 350 ~~----~~~lRi~~~~~~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 350 AG----PKVLRFLPPLIITKEEIDEAVSALE 376 (379)
T ss_pred CC----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 42 36799997554443 444444443
No 256
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.89 E-value=6.9e-21 Score=188.43 Aligned_cols=303 Identities=14% Similarity=0.104 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHH---HHcc-CCCCC----eEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESA---LTNT-LSPGD----RIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~---~~~~-~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
..+...++.+++++++|.+.. -+..++|+.+.... ++.+ ..+|+ +|+++...|.++. ..+...|++++
T Consensus 540 ~l~~i~e~q~~l~eltG~d~~--sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp--~sa~~~G~~vv 615 (954)
T PRK05367 540 YRELIDQLEAWLAEITGYDAV--SLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNP--ASAVMAGMKVV 615 (954)
T ss_pred HHHHHHHHHHHHHHHHCCCCE--EECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhH--HHHHHCCCEEE
Confidence 456788999999999998852 24455565655333 3322 24555 5888988888865 33677899999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee-ccccc
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-RMDEW 190 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-~~~~~ 190 (367)
.++++.++.+|+++|+++++++. .++.+|++++|++..+...|+++|+++||+ +|+++++|+++..+...+ +....
T Consensus 616 ~v~~d~~G~iD~~~L~~~i~~~~-~~la~V~it~pst~G~~e~~I~eI~~i~h~--~G~~v~VDgA~~~al~~l~~pg~~ 692 (954)
T PRK05367 616 VVACDENGNIDLDDLRAKAEEHA-DNLAAIMITYPSTHGVFEETIREICEIVHE--HGGQVYLDGANMNAQVGLARPGDI 692 (954)
T ss_pred EECCCCCCCcCHHHHHHHHhccC-CCeEEEEEEcCCCCeeecCCHHHHHHHHHH--cCCEEEEECcChhhccCCCChhhc
Confidence 99998889999999999998643 357788888887764445789999999999 999999999997554333 33457
Q ss_pred cceEEEecCCCcccCC-----CcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcH---HHHHHHHHH
Q 017726 191 GIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSI---QLLYGLRAA 262 (367)
Q Consensus 191 ~~d~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~al~~a 262 (367)
|+|++++++||||++| +|+|++++++.+...+.......... .. ..|. ..+.++ ..+...+..
T Consensus 693 GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~------~~-~~g~--v~ta~~g~al~~~~a~~y 763 (954)
T PRK05367 693 GADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGG------ET-GIGA--VSAAPFGSASILPISWMY 763 (954)
T ss_pred CCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCC------CC-CcCc--chhHHHHHHHHHHHHHHH
Confidence 8999999999999655 44679999876655554332110000 00 0011 112222 222223344
Q ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEE-cCC--CCCHHHHHHHHHhhCCeEEccCC
Q 017726 263 LDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVI-VPS--HINSSEIVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 263 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~L~~~~gv~v~~g~ 338 (367)
+..+..+|++++.++...+++++.++|++. .+....+......-.++.++ ++. +.+..++.++|. ++|+....-.
T Consensus 764 i~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~t~~ 842 (954)
T PRK05367 764 IRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAPTMS 842 (954)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH-HCCCeEeecC
Confidence 455556678888888889999999999884 44333322221222233332 222 456789999995 5698776422
Q ss_pred CCCCCcEEEEeecCCCCHHHHH
Q 017726 339 NKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 339 ~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+ ..+.+||++.-..+.+|++
T Consensus 843 ~p-v~~~l~i~ptE~~s~~elD 863 (954)
T PRK05367 843 FP-VAGTLMVEPTESESKAELD 863 (954)
T ss_pred Cc-cCCEEEEEeeecCCHHHHH
Confidence 22 2567888877776665544
No 257
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.89 E-value=5.3e-21 Score=173.93 Aligned_cols=271 Identities=20% Similarity=0.219 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC-CC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD-WG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~ 118 (367)
....+++++.+++++|.+. ++.++|||.|+.+++.++ +.+||+|+++...+.+. .......|++++.++++ .+
T Consensus 24 g~~~~~fE~~~a~~~g~~~---~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~--~~ai~~~G~~pv~~Di~~~~ 98 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKY---AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPAT--ASAILWAGAEPVFVDIDPET 98 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSE---EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THH--HHHHHHTT-EEEEE-BETTT
T ss_pred CHHHHHHHHHHHHHhCCCe---EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHH--HHHHHHhccEEEEEeccCCc
Confidence 4778899999999999655 788899999999999875 57999999998766654 35577899999999998 56
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeec--cccccceEEE
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR--MDEWGIDVAL 196 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~--~~~~~~d~~~ 196 (367)
+.+|++.++++++ +++|+|+++|. .|...|+++|.++|++ +|++||.|++|++|+..-. +... -|+.+
T Consensus 99 ~~id~~~~~~~i~----~~t~ai~~~h~---~G~~~d~~~i~~~~~~--~~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~ 168 (363)
T PF01041_consen 99 LNIDPEALEKAIT----PKTKAILVVHL---FGNPADMDAIRAIARK--HGIPLIEDAAQAFGARYKGRPVGSF-GDIAI 168 (363)
T ss_dssp SSB-HHHHHHHHH----TTEEEEEEE-G---GGB---HHHHHHHHHH--TT-EEEEE-TTTTT-EETTEETTSS-SSEEE
T ss_pred CCcCHHHHHHHhc----cCccEEEEecC---CCCcccHHHHHHHHHH--cCCcEEEccccccCceeCCEeccCC-CCceE
Confidence 7899999999999 57799999985 7999999999999999 9999999999999874311 1122 37777
Q ss_pred ecC--CCcccCCCcceeeeeC-HHHHHHhccCCCCceeechHHHHHHhh----cCCccCCCCcHHHHHHHHHHHHHHHHh
Q 017726 197 TGS--QKALSLPTGMGIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYN----LGTFWPYTPSIQLLYGLRAALDLIFEE 269 (367)
Q Consensus 197 ~s~--~K~~~g~~g~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~al~~al~~~~~~ 269 (367)
+|+ .|.+.++.| |+++.+ +++.+++......+...+ . ..++. .|. .+-++ .+.+++...+-.
T Consensus 169 fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~~~--~-~~~~~~~~~~g~--n~rm~-----~~~AAigl~QL~ 237 (363)
T PF01041_consen 169 FSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRSRD--A-FRRYRHELPPGY--NFRMS-----ELQAAIGLAQLK 237 (363)
T ss_dssp EESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETS--E-CSTTEESSSS----B-B-B-----HHHHHHHHHHHH
T ss_pred ecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcCcc--c-cccccccccCCc--ccccH-----HHHHHHHHHHHH
Confidence 775 599976666 777765 555666654433222110 0 00000 010 11122 345565555555
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHc-CCccccC-CCcc-CCCceEEEEcCCC--CCHHHHHHHHHhhCCeEEccCC
Q 017726 270 GLENVIERHRRLGKATRLAVEAW-GLKNCTQ-KEEW-FSDTVTAVIVPSH--INSSEIVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 270 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~-~~~~~~~~~~~~~--~~~~~l~~~L~~~~gv~v~~g~ 338 (367)
.+++..++.+++++.+.+.|++. ++..... .... ..+..+.+.+++. .+.+++.+.|.++ ||.+...+
T Consensus 238 ~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~-GI~~~~~~ 310 (363)
T PF01041_consen 238 RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRAR-GIETRPHY 310 (363)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHT-TBEEBCST
T ss_pred HhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHC-CCcccccc
Confidence 57888889999999999999998 5544332 2221 3555667777543 3578999999766 99998766
No 258
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.89 E-value=8.9e-21 Score=171.04 Aligned_cols=283 Identities=19% Similarity=0.157 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+....+++.++++.|... +++++||..|+..++.+++.+||+|+++..-|.+.+ +.......|+++..++..
T Consensus 54 nPt~~~le~~la~Le~g~~---a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~-- 128 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGED---ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPT-- 128 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SE---EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTT--
T ss_pred cccHHHHHHHHHHhhcccc---eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCch--
Confidence 4677899999999998643 566799999999999999999999999998877764 445567789999988754
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCC-cEEEEeeeeccCceeeccccccceEEEe
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHP-ALFLVDGVSSICAIDFRMDEWGIDVALT 197 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~-~~vi~D~~~~~~~~~~~~~~~~~d~~~~ 197 (367)
|+++++++++ +++++|++.+|.||+..+.|+++|+++||+ +| +++++|.+.+.+. ..+.-..|+|+++.
T Consensus 129 ---d~~~l~~~l~----~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~--~g~~~~vVDnT~atp~-~~~pL~~GaDivv~ 198 (386)
T PF01053_consen 129 ---DLEALEAALR----PNTKLVFLESPSNPTLEVPDLEAIAKLAKE--HGDILVVVDNTFATPY-NQNPLELGADIVVH 198 (386)
T ss_dssp ---SHHHHHHHHC----TTEEEEEEESSBTTTTB---HHHHHHHHHH--TTT-EEEEECTTTHTT-TC-GGGGT-SEEEE
T ss_pred ---hHHHHHhhcc----ccceEEEEEcCCCcccccccHHHHHHHHHH--hCCceEEeecccccee-eeccCcCCceEEEe
Confidence 7999999998 477999999999999999999999999999 88 9999999876543 23444568999999
Q ss_pred cCCCcccCCCc--ceeeeeCH--HHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHH
Q 017726 198 GSQKALSLPTG--MGIVCASP--KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLEN 273 (367)
Q Consensus 198 s~~K~~~g~~g--~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~ 273 (367)
|.+|+++|... .|.++.++ ++.+++.... + ..|. +++.. .+.+-...-.-+.-
T Consensus 199 S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-------------~-~~G~----~~~p~-----da~ll~rgl~Tl~~ 255 (386)
T PF01053_consen 199 SATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-------------R-LLGA----TLSPF-----DAWLLLRGLRTLPL 255 (386)
T ss_dssp ETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-------------H-HHT-----B--HH-----HHHHHHHHHTTHHH
T ss_pred eccccccCCcceeeEEEEECchhhhhhhhcchh-------------h-hcCc----cchHH-----HHHHHhcCCCcHHH
Confidence 99999987654 37777665 6665554221 1 1121 23332 21221212222677
Q ss_pred HHHHHHHHHHHHHHHHHHc-CCc-cccCC----Cc--------cCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccC-
Q 017726 274 VIERHRRLGKATRLAVEAW-GLK-NCTQK----EE--------WFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLG- 337 (367)
Q Consensus 274 ~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g- 337 (367)
+.++..+++..+.+.|++. .+. +.-|. +. ...+.++.|.+..+. ....|.+.|+ -..+.+.-|
T Consensus 256 R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~-l~~~~~SlGg 334 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALK-LFSIAPSLGG 334 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-S-SSEESSS-SS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhh-hHhhhhhcCC
Confidence 8889999999999999997 442 32221 10 123348999985332 2344555552 211111111
Q ss_pred CC----------------------CCCCcEEEEeecCCCCHHHHHHhh
Q 017726 338 LN----------------------KVAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 338 ~~----------------------~~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
.. ...++.+|+| .|-++.+|++..+
T Consensus 335 ~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlS-vGlEd~~dLi~Dl 381 (386)
T PF01053_consen 335 VESLISHPASTSHRSLSPEERAEAGISDGLIRLS-VGLEDPDDLIADL 381 (386)
T ss_dssp SS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE---SS-HHHHHHHH
T ss_pred cccccccccchhhccCChhhhhccCCCCCeeEEE-eccCCHHHHHHHH
Confidence 11 0123569998 5777777776654
No 259
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=1.4e-20 Score=173.96 Aligned_cols=294 Identities=17% Similarity=0.154 Sum_probs=193.2
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC---------CC-CeE
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS---------PG-DRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~---------~g-d~v 87 (367)
.+.+.+++.+.... +.+ ........++.+.++++++.+ .+++++||++|++.++..... +| ++|
T Consensus 59 ~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~v 135 (401)
T PRK00854 59 HPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGSH---KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEI 135 (401)
T ss_pred CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceE
Confidence 45566666554322 111 112356778999999998753 489999999999998876531 23 678
Q ss_pred EEEeCCcchHHHHHHHHHhC-------------CceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 88 ISFLIGQFSLLWIDQQQRLN-------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
++....|++..... . ..+ ..+..++. .|++++++++. +++++|++++++||+|.+.
T Consensus 136 i~~~~~~HG~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~----~~~~aii~e~~~~~~G~~~ 204 (401)
T PRK00854 136 IVCADNFHGRTLSI-V-GFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAIT----PNTVAFLVEPIQGEAGVII 204 (401)
T ss_pred EEECCCcCCccHHH-H-hccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhC----CCeEEEEEccccCCCCCcC
Confidence 88888777753211 1 111 12233322 37899999987 4679999999999999998
Q ss_pred c----HHHHHHHHHhcCCCcEEEEeeeec-cCcee--e--ccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhcc
Q 017726 155 N----LSKVRKLLDEYRHPALFLVDGVSS-ICAID--F--RMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKT 224 (367)
Q Consensus 155 ~----~~~i~~~~~~~~~~~~vi~D~~~~-~~~~~--~--~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~ 224 (367)
| +++|+++|++ +|+++|+|++|+ ++... + .......|++++ +|++++.. .+|++++++++++.+..
T Consensus 205 ~~~~~l~~l~~l~~~--~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~--~K~l~gg~~~ig~v~~~~~~~~~l~~ 280 (401)
T PRK00854 205 PPAGYFTRVRELCTA--NNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLI--GKALSGGFYPVSAVLSNSEVLGVLKP 280 (401)
T ss_pred CCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEe--cccccCCccCeEEEEEcHHHHhcccC
Confidence 7 8999999999 999999999997 43321 1 112234688776 49997652 46889999998876643
Q ss_pred CCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 017726 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (367)
... +. .+..+...+++..++|+.+.+.+ ..++.+++++++.+.|++++........ .
T Consensus 281 ~~~----------------~~--t~~~~~~~~aa~~a~L~~l~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~--g 337 (401)
T PRK00854 281 GQH----------------GS--TFGGNPLACAVARAALKVLTEEG---MIENAAEMGAYFLEGLRSIRSNIVREVR--G 337 (401)
T ss_pred CCC----------------CC--CCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhhccCceEEEe--c
Confidence 110 11 22345556677777887766543 4567888999999999987543221101 1
Q ss_pred CCceEEEEc-CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 305 SDTVTAVIV-PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 305 ~~~~~~~~~-~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+.++.+.+ ++..+..++++.|.++ ||.+.+. .+.++|++++...+++++.
T Consensus 338 ~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~----~~~~lR~~p~~~~t~e~i~ 389 (401)
T PRK00854 338 RGLMLAVELEPEAGGARQYCEALKER-GLLAKDT----HDHTIRLAPPLVITREQVD 389 (401)
T ss_pred cceEEEEEEecCchhHHHHHHHHHHC-CeEEecC----CCCEEEEeCCcccCHHHHH
Confidence 233444444 3333567899999765 9998642 2368999987666655443
No 260
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.89 E-value=1.3e-20 Score=182.17 Aligned_cols=311 Identities=14% Similarity=0.056 Sum_probs=198.1
Q ss_pred CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEEEEeCCcchHHHHHHHHHhCCc
Q 017726 38 PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQRLNFN 109 (367)
Q Consensus 38 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~ 109 (367)
.+..+...+++++++++.|.+... +.-++|+.+....++++. ...++|+++...|.++.. .+...|++
T Consensus 539 QG~lq~i~elq~~l~eLtGmd~~S--l~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--sa~~~Gie 614 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFDAIC--MQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--SAQMAGMR 614 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCCeEe--ecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--HHHHCCCE
Confidence 346778899999999999998742 555577766655444421 124577888888877642 26678999
Q ss_pred eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeec-cc
Q 017726 110 VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR-MD 188 (367)
Q Consensus 110 ~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~-~~ 188 (367)
++.++.++++.+|+++|++++++.. +++++|++++|++-.+...|+++|+++||+ +|++|++|+++..+...++ ..
T Consensus 615 Vv~Vp~D~~G~iDle~L~a~I~~~~-~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~--~Galv~vDgA~~~a~~~l~~Pg 691 (954)
T PRK12566 615 VVIVECDPDGNVDLDDLKAKAAAAG-DRLSCLMITYPSTHGVYEEGIREICEVVHQ--HGGQVYMDGANLNAQVGLARPA 691 (954)
T ss_pred EEEeccCCCCCcCHHHHHHHhhccC-CCEEEEEEEecCcCceecchHHHHHHHHHH--cCCEEEEEeeChhhccCCCChh
Confidence 9999998889999999999998543 477888888888777776789999999999 9999999999987666555 46
Q ss_pred cccceEEEecCCCcccCCCcceeeeeCH-HHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH
Q 017726 189 EWGIDVALTGSQKALSLPTGMGIVCASP-KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF 267 (367)
Q Consensus 189 ~~~~d~~~~s~~K~~~g~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~ 267 (367)
++|+|++++++||||++|.|.|..++.+ ...+.+.+.....-..+... .+-+.++. .. ....+...+..++.++.
T Consensus 692 ~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G--~~~r~ga~-S~-~~~gsa~~l~~A~~Yi~ 767 (954)
T PRK12566 692 DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEG--PDPNNGAV-SA-APWGSASILPISWMYIA 767 (954)
T ss_pred hcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCC--CCCCCCce-ee-cccchHHHHHHHHHHHH
Confidence 7899999999999998887765554444 33332222111000000000 00011221 11 11111122333444444
Q ss_pred HhC--hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCcc-CCCceEEEEcC--CCCCHHHHHHHHHhhCCeEEccCCCCC
Q 017726 268 EEG--LENVIERHRRLGKATRLAVEAW-GLKNCTQKEEW-FSDTVTAVIVP--SHINSSEIVRRAWQRYNLSLGLGLNKV 341 (367)
Q Consensus 268 ~~g--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~l~~~L~~~~gv~v~~g~~~~ 341 (367)
..| +.+..+....+++|+.++|++. ++...++++.. +...+..+.++ .+.+.+++.++|. ++||....-..+
T Consensus 768 ~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Gihapt~~fP- 845 (954)
T PRK12566 768 MMGPQLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHAPTMSFP- 845 (954)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH-HCCcEEeEEeec-
Confidence 444 5555666678999999999883 44332211110 11111112222 2467788999998 668876542223
Q ss_pred CCcEEEEeecCCCCHHHHHH
Q 017726 342 AGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 342 ~~~~iRi~~~~~~~~~~~~~ 361 (367)
..+.+||+..-+++.+|+++
T Consensus 846 v~~~LmIepTE~eskeEIDr 865 (954)
T PRK12566 846 VPGTLMVEPTESESKAELDR 865 (954)
T ss_pred cCCEEEEEeeeeCCHHHHHH
Confidence 35679999888777665443
No 261
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=6.4e-21 Score=157.50 Aligned_cols=307 Identities=15% Similarity=0.161 Sum_probs=213.5
Q ss_pred CChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-CCCCeEEEEeCCcchH
Q 017726 19 HIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-SPGDRIISFLIGQFSL 97 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-~~gd~vl~~~~~~~~~ 97 (367)
.+..++.++|.+......-|+......++++..|+++|-+. .+|++|||.+++++++.-+ ++|.+||+-+..|...
T Consensus 33 ~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~GKEA---gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~ 109 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFGKEA---GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHR 109 (384)
T ss_pred CChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhCccc---eeeecccccccHHHHHHHhcCCCceEEeccchheee
Confidence 44677888888876665545555677899999999999776 5899999999999998854 5899999887765543
Q ss_pred H-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC----CCCccEEEEEecCCCcc-ccccHH---HHHHHHHhcCC
Q 017726 98 L-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT----AHTIKAICIVHNETATG-VTNNLS---KVRKLLDEYRH 168 (367)
Q Consensus 98 ~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~----~~~~~lv~~~~~~n~tG-~~~~~~---~i~~~~~~~~~ 168 (367)
. ...++...|+.++.+..++++.+|++++++++.... .+.+++|++.+-+|.+| .++|++ ++.++|++ |
T Consensus 110 ~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~--~ 187 (384)
T KOG1368|consen 110 YEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKR--H 187 (384)
T ss_pred hhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhc--c
Confidence 2 234567788999999988999999999999998421 15789999999998888 888865 57888888 9
Q ss_pred CcEEEEeeeecc---Cceeeccccc--cceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 169 PALFLVDGVSSI---CAIDFRMDEW--GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 169 ~~~vi~D~~~~~---~~~~~~~~~~--~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
|+.+++|++--+ -+..+++..+ .+|.+..++||.++.|-| ++++++++++++....+ +.+ .
T Consensus 188 glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVG-SViVG~k~FI~kA~~~R------------Kal-G 253 (384)
T KOG1368|consen 188 GLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVG-SVIVGSKDFIDKARHFR------------KAL-G 253 (384)
T ss_pred CCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcc-cEEEccHHHHHHHHHHH------------HHh-c
Confidence 999999987321 1222333332 479999999999987776 89999999988765221 111 1
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEc-CCCCCHHH
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-PSHINSSE 321 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 321 (367)
|+ .--.++.+ .+++-.+++. +. ..++-.+.+..+.+.+.+. ++.+..+.- ..+ ++.+.+ -.++++++
T Consensus 254 GG-----mRQsGvLa-aaaLval~~~-~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~--etN-iv~~~l~q~~~~~~~ 322 (384)
T KOG1368|consen 254 GG-----MRQSGVLA-AAALVALDEN-VP-LLRADHKRAKELAEYINTPEEIRVEVPAV--ETN-IVNMVLCQARLTAEE 322 (384)
T ss_pred Cc-----hhHHHHHH-HHHHHHhhcc-hH-HHHHHHHHHHHHHHHhccccceeeecchh--hcc-eeeeecccccCCHHH
Confidence 22 11111122 2233333332 33 3445566777778888777 466655421 243 333333 24678999
Q ss_pred HHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 322 IVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
|++.+ +++||.+.++.. ..+||.++.-.++++..
T Consensus 323 l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve 356 (384)
T KOG1368|consen 323 LCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVE 356 (384)
T ss_pred HHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHH
Confidence 99999 466998876543 34999988877766554
No 262
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=6.1e-20 Score=169.84 Aligned_cols=301 Identities=17% Similarity=0.110 Sum_probs=193.1
Q ss_pred hHHHHHHHccCCCC--CCCCc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC----------CCCCeE
Q 017726 21 PDQVIRAMNRNNED--YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----------SPGDRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~-~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~----------~~gd~v 87 (367)
++.+.+++.+.... +.+.. ..+...++++.++++.+.+ .+++++||++|+..++.... ..+++|
T Consensus 49 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~v 125 (400)
T PTZ00125 49 HPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGYD---KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKI 125 (400)
T ss_pred CHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeE
Confidence 56677777765321 22221 2456788899998887653 48899999999999887542 135789
Q ss_pred EEEeCCcchHHHHHHHHHhCCceE--EEeCCCC----CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 88 ISFLIGQFSLLWIDQQQRLNFNVD--VVESDWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
++.+.+|++..+.......+.... ..+...+ ...|++++++.++. +++++|++.+++|++|.+.| ++
T Consensus 126 l~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~v~~ep~~~~~G~~~~~~~~l~ 202 (400)
T PTZ00125 126 IFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD---PNVAAFIVEPIQGEAGVIVPDDGYLK 202 (400)
T ss_pred EEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC---CCeEEEEEcCccCCCCCccCCHHHHH
Confidence 999888888654322221111110 0000000 11389999999862 46899999999999999997 99
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhccCCCCcee
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
+|.++|++ +|+++|+|++|+.... ..+......|++++ +|+++++. ++|++++++++++.+.....
T Consensus 203 ~l~~l~~~--~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~~~~~~~~~~~~~---- 274 (400)
T PTZ00125 203 QVYELCKK--YNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLANDDVMLVIKPGEH---- 274 (400)
T ss_pred HHHHHHHH--cCCEEEEeccccCCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEcHHHHhhccCCCC----
Confidence 99999999 9999999999863221 12222234577765 59997653 68999999999887753211
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CC-ccccCCCccCCCceE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GL-KNCTQKEEWFSDTVT 309 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~ 309 (367)
+. .+..+...+.+..++++.+.++++ .++..++.+++++.|+++ +. .....-. ..+.++
T Consensus 275 ------------~~--t~~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~--~~g~~~ 335 (400)
T PTZ00125 275 ------------GS--TYGGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIR--GKGLLN 335 (400)
T ss_pred ------------CC--CCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEe--cccEEE
Confidence 11 122444455666677877766554 345566777888888774 21 1111101 134466
Q ss_pred EEEcCC--CCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 310 AVIVPS--HINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 310 ~~~~~~--~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
++.++. ..+..++++.|.++ ||.+.++ .+.++||++....+++++
T Consensus 336 ~v~~~~~~~~~~~~~~~~l~~~-Gv~v~~~----~~~~lRi~~~~~~~~~~i 382 (400)
T PTZ00125 336 AIVFDHSDGVNAWDLCLKLKEN-GLLAKPT----HDNIIRFAPPLVITKEQL 382 (400)
T ss_pred EEEEccCcchHHHHHHHHHHHC-CeEEeec----CCCEEEEECCccCCHHHH
Confidence 666642 34567899999754 9999764 246899998765655443
No 263
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.88 E-value=8.6e-20 Score=168.15 Aligned_cols=298 Identities=16% Similarity=0.120 Sum_probs=191.6
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC---------CCC-CeE
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL---------SPG-DRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~---------~~g-d~v 87 (367)
.+.+.+++.+.... +.+ ....+...++.++++++.+. +.+++++||++|+..++.... .+| ++|
T Consensus 58 ~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~i 134 (396)
T PRK04073 58 HPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK---DMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEI 134 (396)
T ss_pred CHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC---CeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEE
Confidence 45566666554322 111 11234566788888888764 358999999999999887532 133 678
Q ss_pred EEEeCCcchHHHHHHHHHhCC------------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 88 ISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
+..+.+|++..... ....+. .+..++.+ |+++++++++ +++++|++++++||+|.+.|
T Consensus 135 i~~~~~~HG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~i~----~~~~~viiep~~~~~G~~~~ 204 (396)
T PRK04073 135 IACEGNFHGRTMAA-VSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAAIT----PNTAAFLVEPIQGEAGINIP 204 (396)
T ss_pred EEECCCcCCCCHHH-HhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHhcc----cCeEEEEEcCccCCCCCccC
Confidence 88877777753211 111111 11223222 7899999886 46799999999999999986
Q ss_pred ----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccC
Q 017726 156 ----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~ 225 (367)
+++|.++|++ +|+++|+|++|+.... ..+......|++++ +|.++++ ..+|++++++++++.+...
T Consensus 205 ~~~~l~~l~~l~~~--~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~~~i~~~~~~~ 280 (396)
T PRK04073 205 PEGFLKAARELCKE--ENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVAANRDILGVFTPG 280 (396)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEEEcHHHHhhhcCC
Confidence 7899999999 9999999999874321 11223334677765 6988654 3479999999988776532
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFS 305 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 305 (367)
.. +. .+..+...+++..++|+.+.+++ ..++..++++++.+.|++++...+..-. ..
T Consensus 281 ~~----------------~~--t~~~~~~~~aaa~aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~~~--~~ 337 (396)
T PRK04073 281 SH----------------GS--TFGGNPLACAVSIAALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKEVR--GR 337 (396)
T ss_pred CC----------------CC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCccccee--cc
Confidence 11 11 23355666666777887776654 3456677899999999887433222111 12
Q ss_pred CceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 306 DTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
+.++.+.++ .+..+++++|.++ ||.+.+. .+++|||++....+++ |...++|+
T Consensus 338 g~~~~~~~~--~~~~~~~~~l~~~-Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~ 392 (396)
T PRK04073 338 GLFIGVELN--EPARPYCEALKEE-GLLCKET----HETVIRFAPPLVITKEELDWAFEKIK 392 (396)
T ss_pred eEEEEEEec--chHHHHHHHHHHC-CeEEecC----CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 345666663 2467899998755 9998752 2368999975555544 44444443
No 264
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=4.2e-20 Score=170.76 Aligned_cols=273 Identities=16% Similarity=0.174 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---------CCCCCeEEEEeCCcchHHHHHHHHHhCCceEE
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---------LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDV 112 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---------~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 112 (367)
....++++.+++++|.+. +++++|||+|+..++.++ +.+||+|+++.++|.+.. ..+...|++++.
T Consensus 63 ~~~~~fe~~lA~~~g~~~---~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~--~~v~~~G~~pv~ 137 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRY---ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTV--NPIIQNGLVPVF 137 (438)
T ss_pred hhHHHHHHHHHHHhCCCe---EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHH--HHHHHcCCEEEE
Confidence 457799999999999753 788899999999888754 578999999999877654 345668999999
Q ss_pred EeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeec--ccc
Q 017726 113 VESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR--MDE 189 (367)
Q Consensus 113 v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~--~~~ 189 (367)
++++ .++.+|++.++++++ +++|+|+++++ .|...++++|.++|++ +|++||+|++|++|+..-+ ...
T Consensus 138 vdvd~~~~~id~~~le~~i~----~~tkaVi~~~~---~G~p~dl~~I~~la~~--~gi~vIeDaa~a~G~~~~g~~~G~ 208 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVS----PKTKAIMIAHT---LGNPFDLAAVKAFCDK--HNLWLIEDNCDALGSTYDGRMTGT 208 (438)
T ss_pred EecCCCcCCcCHHHHHHHcC----cCCeEEEEeCC---CCChhhHHHHHHHHHH--CCCEEEEECccchhhhcCCeeeec
Confidence 9887 457789999999987 47799999874 7888899999999999 9999999999998875422 222
Q ss_pred ccceEEEecC--CCcccCCCcceeeeeCHHH-HHHhccCCCCcee------ec------hH----HH----HHHh---hc
Q 017726 190 WGIDVALTGS--QKALSLPTGMGIVCASPKA-LEASKTAKSVRVF------FD------WK----DY----IKFY---NL 243 (367)
Q Consensus 190 ~~~d~~~~s~--~K~~~g~~g~g~~~~~~~~-~~~~~~~~~~~~~------~~------~~----~~----~~~~---~~ 243 (367)
.| |+.++|+ .|.+.+..| |+++.+++. .+++......+.. .+ .. .. ...+ ..
T Consensus 209 ~g-d~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (438)
T PRK15407 209 FG-DIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHL 286 (438)
T ss_pred cC-ceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccc
Confidence 22 6666664 477876666 777766555 4333322111100 00 00 00 0000 01
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc--CCCccCCCceEEEEcCC--CCC
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT--QKEEWFSDTVTAVIVPS--HIN 318 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~~--~~~ 318 (367)
|. .+.+ --+.+|+...+-..++++.++.+++++++.+.|++. +..... +.....++..+.+.+.+ +.+
T Consensus 287 G~--n~rm-----sel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 359 (438)
T PRK15407 287 GY--NLKI-----TDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFT 359 (438)
T ss_pred cc--ccCc-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCC
Confidence 11 1112 235556666555557888889999999999999876 322222 12222333345555532 345
Q ss_pred HHHHHHHHHhhCCeEEccCC
Q 017726 319 SSEIVRRAWQRYNLSLGLGL 338 (367)
Q Consensus 319 ~~~l~~~L~~~~gv~v~~g~ 338 (367)
.+++.+.|.++ ||..+..+
T Consensus 360 Rd~l~~~L~~~-GI~~~~~~ 378 (438)
T PRK15407 360 RVELVKYLEEN-KIGTRLLF 378 (438)
T ss_pred HHHHHHHHHHC-CCCccccC
Confidence 78999999765 99776443
No 265
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.87 E-value=7.9e-20 Score=156.79 Aligned_cols=314 Identities=14% Similarity=0.127 Sum_probs=214.0
Q ss_pred CcccccCCCCCChHHHHHHHccCCCCCCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CC
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LS 82 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~ 82 (367)
|-|+..-+.+.+-.++.+.+.+++....+ .+-..-..++++.+|++.+-+. .++| +|.--|+...+..+ .-
T Consensus 179 NDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~a--ALlF-sSCfVANDstLftLak~l 255 (570)
T KOG1360|consen 179 NDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEA--ALLF-SSCFVANDSTLFTLAKKL 255 (570)
T ss_pred CccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcc--eeee-eeeeeccchHHHHHHHHC
Confidence 44555545555555555555554432111 1223446689999999998776 3555 55556665544433 34
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHH
Q 017726 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (367)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~ 162 (367)
||=.++ ++.+.+.. +..-.+..+++=.....+ |+++|++++...+...||+|.+.+.++.+|.+.|+++|+++
T Consensus 256 pgcei~-SD~gNHAS-MI~GIrns~v~K~IFrHN-----D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDv 328 (570)
T KOG1360|consen 256 PGCEIF-SDEGNHAS-MIQGIRNSRVPKHIFRHN-----DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDV 328 (570)
T ss_pred CCcEEe-ccccchHH-HHHHhhhcCCcceeeccC-----CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHH
Confidence 664444 44433332 222234444433333333 89999999988654679999999999999999999999999
Q ss_pred HHhcCCCcEEEEeeeeccCceee--------ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeech
Q 017726 163 LDEYRHPALFLVDGVSSICAIDF--------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 163 ~~~~~~~~~vi~D~~~~~~~~~~--------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
+++ +|++.++|+.|+.|..-. +......||+.++..|.| |.-| ||+..+..+++-++.... ++.+
T Consensus 329 ah~--yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVG-GYIAat~~LvDmiRSyAa-GFIF-- 401 (570)
T KOG1360|consen 329 AHK--YGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVG-GYIAATRKLVDMIRSYAA-GFIF-- 401 (570)
T ss_pred HHH--hCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-cccc-ceehhhhhHHHHHHHhcC-ceEE--
Confidence 999 999999999988754321 112235799999999999 4665 999999999988876432 2222
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcC
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVP 314 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 314 (367)
..+.+...+++...+++.+..+.-...++..+++..++++.|.+.|+++++. -..++.+++.
T Consensus 402 -------------TTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~-----pSHIiPv~vg 463 (570)
T KOG1360|consen 402 -------------TTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPN-----PSHIIPVRVG 463 (570)
T ss_pred -------------ecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCC-----Ccceeeeecc
Confidence 2345555666777788877644234567778999999999999999999985 2347778886
Q ss_pred CCCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHH
Q 017726 315 SHINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEV 357 (367)
Q Consensus 315 ~~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~ 357 (367)
+..-+.++++.|..+++|+|...-.|. ....+||.+....++.
T Consensus 464 da~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~ 509 (570)
T KOG1360|consen 464 DAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQ 509 (570)
T ss_pred CHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHH
Confidence 555577899999999999998653332 2345999987766654
No 266
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.87 E-value=4.8e-21 Score=155.55 Aligned_cols=164 Identities=29% Similarity=0.301 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCH
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL 123 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 123 (367)
..++++.++++++.+. +.+++++|+++|+.+++.++..++++|++.++.|++..+ ..++..|.+++.++.+.++..+.
T Consensus 2 ~~~~~~~l~~~~~~~~-~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~~ 79 (170)
T cd01494 2 LEELEEKLARLLQPGN-DKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDDAGYGGL 79 (170)
T ss_pred HHHHHHHHHHHcCCCC-CcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh-hHHHhcCCEEEEeccCCCCccch
Confidence 4689999999997444 348888999999999999988889999999999888764 56788899999998876543333
Q ss_pred --HHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---ccccccceEEEec
Q 017726 124 --DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---RMDEWGIDVALTG 198 (367)
Q Consensus 124 --e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~d~~~~s 198 (367)
+.+++... + ++++++++++++|++|...|+++|.++|++ +|+++++|+++..+.... +....++|+++.|
T Consensus 80 ~~~~~~~~~~--~-~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 80 DVAILEELKA--K-PNVALIVITPNTTSGGVLVPLKEIRKIAKE--YGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred hhhhhhhccc--c-CceEEEEEecCcCCCCeEcCHHHHHHHHHH--cCCEEEEecccccccccccccccccccCCEEEEE
Confidence 24443332 1 578999999999999999999999999999 999999999999877664 4555679999999
Q ss_pred CCCcccCCCcceeeeeC
Q 017726 199 SQKALSLPTGMGIVCAS 215 (367)
Q Consensus 199 ~~K~~~g~~g~g~~~~~ 215 (367)
+||++++ +|.|+++++
T Consensus 155 ~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccCC-CceEEEEeC
Confidence 9999976 778999875
No 267
>PRK07505 hypothetical protein; Provisional
Probab=99.87 E-value=3.7e-19 Score=164.36 Aligned_cols=303 Identities=12% Similarity=0.112 Sum_probs=182.3
Q ss_pred hHHHHHHHccCCCC-----CCCC---cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc----cCCCCC-eE
Q 017726 21 PDQVIRAMNRNNED-----YRSP---AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN----TLSPGD-RI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~-----~~~~---~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~----~~~~gd-~v 87 (367)
++++.+++.++... +.+. ...+...++++.++++++. + .++.++|++|+..++.. ...+|+ .+
T Consensus 62 ~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~-~~~~~sG~~a~~~ai~~~~~~~~~~~~~~v 137 (402)
T PRK07505 62 HPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---S-VLTFTSCSAAHLGILPLLASGHLTGGVPPH 137 (402)
T ss_pred CHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---C-EEEECChHHHHHHHHHHHHhcccCCCCCCE
Confidence 56666766664321 1111 2356788999999999986 3 35456778888876643 222233 36
Q ss_pred EEEeCCcchHHH-HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc
Q 017726 88 ISFLIGQFSLLW-IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY 166 (367)
Q Consensus 88 l~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~ 166 (367)
++.+..+++... .......+.+++.++.+ |++++++++++ +++++++++|+||+|.+.|+++|.++|++
T Consensus 138 i~~~~~~H~s~~~~~~~~~~~~~v~~~~~~-----d~~~l~~~~~~----~~~~~vl~~p~~~~G~~~~~~~i~~l~~~- 207 (402)
T PRK07505 138 MVFDKNAHASLNILKGICADETEVETIDHN-----DLDALEDICKT----NKTVAYVADGVYSMGGIAPVKELLRLQEK- 207 (402)
T ss_pred EEEchhhhHhHHhhhhhhhcCCeEEEeCCC-----CHHHHHHHHhc----CCCEEEEEecccccCCcCCHHHHHHHHHH-
Confidence 566554444321 11122235667777653 89999999873 45899999999999999999999999999
Q ss_pred CCCcEEEEeeeeccCce-----ee--c-cc--cccceEEEecCCCcccCCCcceeeee-CHHHHHHhccCCCCceeechH
Q 017726 167 RHPALFLVDGVSSICAI-----DF--R-MD--EWGIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWK 235 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~-----~~--~-~~--~~~~d~~~~s~~K~~~g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+|+++|+|++|+.+.+ .+ + .. .....+++.|++|.++ ..| |+++. ++++++.+.......
T Consensus 208 -~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~-~~G-g~~~~~~~~~~~~~~~~~~~~------ 278 (402)
T PRK07505 208 -YGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFG-ASG-GVIMLGDAEQIELILRYAGPL------ 278 (402)
T ss_pred -cCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhh-ccC-eEEEeCCHHHHHHHHHhCCCc------
Confidence 9999999999854211 11 1 11 1234577889999986 444 77664 777777765421110
Q ss_pred HHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC
Q 017726 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS 315 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
+ +..+++...+++..++++.+.++.+.+..++.+++.+.+.+.+... +.. ....+..+.+++
T Consensus 279 ---------t-~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~g-----~~~~i~~~~~~~ 340 (402)
T PRK07505 279 ---------A-FSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE---QSG-----SFLPIRLIYIGD 340 (402)
T ss_pred ---------e-eCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc---CCC-----CCCCEEEEEeCC
Confidence 0 1123556666777777776655555555555555544433322111 111 122223333322
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCC---CCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKV---AGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~---~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
..+..++.+.|.++ ||.+++...+. ...++|+++....+++ +....+|+
T Consensus 341 ~~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~ 394 (402)
T PRK07505 341 EDTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLK 394 (402)
T ss_pred HHHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHH
Confidence 22356899999755 99998763221 2257999987655544 44444443
No 268
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=1.9e-19 Score=165.67 Aligned_cols=275 Identities=16% Similarity=0.128 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc----CCCCC----eEEEEeCCcchHHHHHHHHHhCCceEE-
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT----LSPGD----RIISFLIGQFSLLWIDQQQRLNFNVDV- 112 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~----~~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~~~- 112 (367)
+...++.++++++.+. +.+++++||++|+..+++.. ..+|| +|++.++.|++..... ....+.....
T Consensus 73 ~~~~~la~~l~~~~~~---~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~-~~~~~~~~~~~ 148 (389)
T PRK01278 73 PEQERLAERLVENSFA---DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLAT-IAAGGQEKYLE 148 (389)
T ss_pred hHHHHHHHHHHhhCCC---CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHH-HhccCChhhcc
Confidence 4556788888887642 35999999999999988764 34565 8999999888864211 1111221111
Q ss_pred --EeCCCCCC----CCHHHHHHHHhccCCCCccEEEEEecCCCccccc----cHHHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 113 --VESDWGEG----AKLDVLASKLAADTAHTIKAICIVHNETATGVTN----NLSKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 113 --v~~~~~~~----~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~----~~~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
.+...+.. .|+++++++++ +++++|+++.++|++|... .+++|.++|++ +|+++|+|++|....
T Consensus 149 ~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~--~g~~lI~DEv~~g~g 222 (389)
T PRK01278 149 GFGPLVPGFDQVPFGDIEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDE--NGLLLIFDEVQCGMG 222 (389)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCC
Confidence 01111111 48999999987 4679999999999999443 48889999999 999999999987322
Q ss_pred e-----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHH
Q 017726 183 I-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (367)
Q Consensus 183 ~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (367)
. .........|++ +.+|.+++...+|++++++++++.+..... + ..++.+...++
T Consensus 223 ~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~----------------~--~t~~~~~~~~a 282 (389)
T PRK01278 223 RTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATEEAAKGMTPGTH----------------G--STYGGNPLAMA 282 (389)
T ss_pred cCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcHHHHhccCCCCC----------------C--CCCCccHHHHH
Confidence 1 111112235654 568999654447999999988776643211 1 12345666666
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 017726 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (367)
Q Consensus 258 al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v 334 (367)
+..++++.+.+.+ ..++..++.+++++.|+++ ... +...-. ..+.++++.++ .+..++++.|.++ ||.+
T Consensus 283 aa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~--g~G~~~~i~~~--~~~~~~~~~l~~~-GV~~ 354 (389)
T PRK01278 283 VGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVR--GKGLLLGLKCV--VPNRDLVQALRDE-GLLT 354 (389)
T ss_pred HHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEe--cccEEEEEEEe--cCHHHHHHHHHHC-CeEE
Confidence 7777787775543 3445666777777777664 122 222111 13345555553 2577899999876 9998
Q ss_pred ccCCCCCCCcEEEEeecCCCCHHH
Q 017726 335 GLGLNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 335 ~~g~~~~~~~~iRi~~~~~~~~~~ 358 (367)
.++. .+++|+++....++++
T Consensus 355 ~p~~----~~~lR~~p~~~~~~~~ 374 (389)
T PRK01278 355 VGAG----DNVVRLLPPLIITEEE 374 (389)
T ss_pred eecC----CCEEEEeCCcccCHHH
Confidence 8752 4689999755455443
No 269
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.87 E-value=1.9e-19 Score=162.89 Aligned_cols=280 Identities=15% Similarity=0.134 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+...++++.++++.|.+. .+.++||+.|+.+++.+++.+||+|+++...|.... +...+...|+++..++.++.
T Consensus 63 ~P~~~~lE~~la~leg~~~---av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAEH---ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred ChhHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 4667899999999999764 567788999999999999999999999766443333 33567778999999987632
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
..++ ++. +++++|++.++.||++.+.|+++|.++|++ ++ +++|++++.+.. ......++|++++|
T Consensus 140 ~~~~-------l~~---~~tklv~~e~~snpt~~v~Di~~I~~la~~--~~--lvVD~t~~s~~~-~~pl~~gaDivv~S 204 (384)
T PRK06434 140 NSLD-------FDP---SNYDLIYAESITNPTLKVPDIKNVSSFCHE--ND--VIVDATFASPYN-QNPLDLGADVVIHS 204 (384)
T ss_pred hhee-------ecC---CCeeEEEEEcCCCCCceeecHHHHHHHHHH--cC--eEEECCCCCccc-CCchhcCCCEEEee
Confidence 2222 221 367999999999999999999999999999 87 466999764332 22224579999999
Q ss_pred CCCcccCCCc--ceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHH
Q 017726 199 SQKALSLPTG--MGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVI 275 (367)
Q Consensus 199 ~~K~~~g~~g--~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~ 275 (367)
.+|+++|+.+ .|.++. ++++.+++.... ...|. ..+. ..+++...+-.-++.+.
T Consensus 205 ~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~--------------~~~G~----~~~~-----~~A~l~~~gL~tL~~R~ 261 (384)
T PRK06434 205 ATKYISGHSDVVMGVAGTNNKSIFNNLVERR--------------KTLGS----NPDP-----IQAYLALRGLKTLGLRM 261 (384)
T ss_pred cccccCCCCCceEEEEecCcHHHHHHHHHHH--------------HhcCC----CCCH-----HHHHHHHhCCCcHHHHH
Confidence 9999987664 366656 444444443210 01121 1222 23344333333478889
Q ss_pred HHHHHHHHHHHHHHHHc-CCc-cccCCC------ccCCCceEEEEcCCCC-CHHHHHHHHHhhCCeEEccCC-C-----C
Q 017726 276 ERHRRLGKATRLAVEAW-GLK-NCTQKE------EWFSDTVTAVIVPSHI-NSSEIVRRAWQRYNLSLGLGL-N-----K 340 (367)
Q Consensus 276 ~~~~~~~~~l~~~L~~~-g~~-~~~~~~------~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~v~~g~-~-----~ 340 (367)
++..+++..+.+.|++. .+. +.-|.- ....+.++.|.+. +. ....|.+.|. -..+.+.-|- . +
T Consensus 262 ~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l~-l~~~~~slG~~~sl~~~p 339 (384)
T PRK06434 262 EKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR-SMEDVHKFIRNLE-IPMVAASLGGVESLITLP 339 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC-CHHHHHHHHHhCC-cceEccCCCCCCeeeECC
Confidence 99999999999999987 442 222210 0124568889983 31 1223333331 1122222221 0 0
Q ss_pred -----------------CCCcEEEEeecCCCCHHHHHHhhh
Q 017726 341 -----------------VAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 341 -----------------~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
..++.||+| .|-++.+|+..++.
T Consensus 340 ~~~~h~~~~~e~~~~~gi~~~liRls-vGlEd~~dLi~dl~ 379 (384)
T PRK06434 340 VETSHSSLSPEERERLGISDNLVRFS-IGIEDIDDLIKDIE 379 (384)
T ss_pred CccccccCCHHHHHhcCCCcCeEEEE-eCcCCHHHHHHHHH
Confidence 113469998 57778888776654
No 270
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.87 E-value=3.3e-19 Score=158.72 Aligned_cols=286 Identities=15% Similarity=0.118 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+....+++.++.+-|... .+.++||..|+..++.+++++||+|++++.-|.+.+ +....++.|+++..++..
T Consensus 62 nPT~~~lE~~~a~LEg~~~---~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~-- 136 (396)
T COG0626 62 NPTRDALEEALAELEGGED---AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG-- 136 (396)
T ss_pred CccHHHHHHHHHHhhCCCc---EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC--
Confidence 3556788888898887555 466688999999999999999999999999777764 556777899999888654
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+.+++++++.+ ++||+|++.+|.||+-.+.|+++|.++||+ +|+++++|.+.+.+.. ...-..|+||++.|
T Consensus 137 ---~~~~~~~~~~~---~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~--~g~~vvVDNTfatP~~-q~PL~~GaDIVvhS 207 (396)
T COG0626 137 ---DDEALEAAIKE---PNTKLVFLETPSNPLLEVPDIPAIARLAKA--YGALVVVDNTFATPVL-QRPLELGADIVVHS 207 (396)
T ss_pred ---ChHHHHHHhcc---cCceEEEEeCCCCcccccccHHHHHHHHHh--cCCEEEEECCcccccc-cChhhcCCCEEEEe
Confidence 45677777763 367999999999999999999999999999 9999999999876443 23334589999999
Q ss_pred CCCcccCCCcc--eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 199 SQKALSLPTGM--GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 199 ~~K~~~g~~g~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
.+|+++|...+ |++..+++.+....... .+-..|. .++....+.+...++- +.-+.+
T Consensus 208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~~------------~~~~~G~----~l~p~dA~l~lRGlkT-----L~~Rm~ 266 (396)
T COG0626 208 ATKYLGGHSDVLGGVVLTPNEELYELLFFA------------QRANTGA----VLSPFDAWLLLRGLRT-----LALRME 266 (396)
T ss_pred ccccccCCcceeeeEEecChHHHHHHHHHH------------HHhhcCC----CCCHHHHHHHHhccch-----HHHHHH
Confidence 99999887553 76665665544332100 0101122 2333222222222222 566788
Q ss_pred HHHHHHHHHHHHHHHc-CCc-cccCC----Cc-------c-CCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccC-CC--
Q 017726 277 RHRRLGKATRLAVEAW-GLK-NCTQK----EE-------W-FSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG-LN-- 339 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~-~~~~~----~~-------~-~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g-~~-- 339 (367)
+..+++..+.+.|++. .++ ++-|. +. . ..+.+++|.+..+.+..+|.+.|+ -..+...-| ..
T Consensus 267 ~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~-l~~~a~SlGgveSL 345 (396)
T COG0626 267 RHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLK-LFKLAESLGGVESL 345 (396)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCC-ccEEeccCCCcccc
Confidence 8999999999999996 432 33331 10 1 156689999943323445555552 333333322 11
Q ss_pred ---C-----------------CCCcEEEEeecCCCCHHHHHHhh
Q 017726 340 ---K-----------------VAGKVFRIGHLGHLNEVMFNFQL 363 (367)
Q Consensus 340 ---~-----------------~~~~~iRi~~~~~~~~~~~~~~~ 363 (367)
+ ..++.+|+| .|-++.+|+...+
T Consensus 346 i~~pa~~th~~~~~~~r~~~Gi~~~LvRlS-VGlEd~eDLi~Dl 388 (396)
T COG0626 346 ISHPATMTHASIPLEERAKAGITDGLVRLS-VGLEDVEDLIADL 388 (396)
T ss_pred cccccccCcccCCHhHHHhcCCCCCeEEEE-ecCCCHHHHHHHH
Confidence 1 124569998 5777777766554
No 271
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=3.3e-19 Score=164.78 Aligned_cols=275 Identities=16% Similarity=0.147 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-------CeEEEEeCCcchHHHHHHHHHhCCceE--
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-------DRIISFLIGQFSLLWIDQQQRLNFNVD-- 111 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-------d~vl~~~~~~~~~~~~~~~~~~g~~~~-- 111 (367)
.+...++.+.++++.+. +.+++++||++|+..++......+ ++|++..+.|++...... ...+....
T Consensus 80 ~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~-~~~~~~~~~~ 155 (396)
T PRK02627 80 IEPQEELAEKLVELSGM---DKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATL-SATGQPKYQE 155 (396)
T ss_pred CHHHHHHHHHHHhhcCC---CEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHH-HhcCCccccc
Confidence 45667788888888664 359999999999999988543222 678888888876532111 11121111
Q ss_pred -EEeCCCCC----CCCHHHHHHHHhccCCCCccEEEEEecCCCccc-ccc---HHHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 112 -VVESDWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGV-TNN---LSKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 112 -~v~~~~~~----~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~-~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
..+...+. ..|++++++++. +++++|++++++|++|. ++| +++|.++|++ +|+++|+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~--~~~~lI~DE~~~g~g 229 (396)
T PRK02627 156 GFEPLVEGFIYVPFNDIEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDE--NGILLILDEVQTGMG 229 (396)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhcCCC
Confidence 11111111 128899999986 47799999999999994 444 7889999999 999999999987321
Q ss_pred e-----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHH
Q 017726 183 I-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (367)
Q Consensus 183 ~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (367)
. .+.......|++ +++|.++++..+|++++++++++.+..... . ..+..+...+.
T Consensus 230 ~~g~~~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~~~~~~~~~~~~----------------~--~t~~~~~~~~~ 289 (396)
T PRK02627 230 RTGKLFAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKEKVADVFTPGDH----------------G--STFGGNPLACA 289 (396)
T ss_pred ccCceeeehhcCCCCCEE--EEcchhhCCcccEEEEEcHHHHhccCCCCC----------------C--CCCCCCHHHHH
Confidence 1 111222235655 467998754557999999998776653211 1 13345665666
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 017726 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 258 al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~ 335 (367)
+..++++.+.+.+ ..++.+++.+++++.|++. .+.....-. ..+.++++.++ .+..++++.|.++ ||.+.
T Consensus 290 aa~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~i~~~--~~~~~~~~~l~~~-Gv~v~ 361 (396)
T PRK02627 290 AALAVIEIIEEEG---LLENAAEVGEYLRAKLRELLEKYPGIKEVR--GLGLMIGIELD--RPAAEIVKKALEK-GLLIN 361 (396)
T ss_pred HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhCCCeeeec--cCcEEEEEEec--CcHHHHHHHHHHC-CeEEe
Confidence 6666777665543 3456666677777777664 222221111 13446777762 3578899999876 99998
Q ss_pred cCCCCCCCcEEEEeecCCCCHH
Q 017726 336 LGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 336 ~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
++. ..++|+++....+++
T Consensus 362 ~~~----~~~lRi~~~~~~~~~ 379 (396)
T PRK02627 362 VTG----DNVLRLLPPLIISKE 379 (396)
T ss_pred ecC----CCEEEEECCcccCHH
Confidence 752 367999865444443
No 272
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.86 E-value=4.2e-19 Score=162.06 Aligned_cols=263 Identities=12% Similarity=0.130 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHHccC--C-CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeC
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALTNTL--S-PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt-~al~~~~~~~~--~-~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 115 (367)
.....+++.+.+++++|.+.....++++|+| .++.+++.++- . +|+.|+++...|.+. .+.+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~--~kAi~~~G~~pv~Vd~ 180 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSC--IKAISTAGFEPRVIET 180 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHH--HHHHHHcCCeEEEeee
Confidence 5677889999999999998444478889999 58877776643 2 589999998876654 3678889999999995
Q ss_pred ---CCCCCCCHHHHHHHHhccCCCCccEEEEEecC-CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee-----c
Q 017726 116 ---DWGEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF-----R 186 (367)
Q Consensus 116 ---~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~-n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-----~ 186 (367)
+.++.+|+++++++|++.+ ++..++++.+++ +..|...|+++|.++|++ +|+++|+|++|+.+.... .
T Consensus 181 ~~d~~~~~iD~e~Le~aIt~~~-~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k--~gI~lIvDaAyg~~~~~~~~~~~~ 257 (444)
T TIGR03531 181 VLDGDELTTDVEDIERAIEEIG-PDNILCVLSTTSCFAPRSPDDIEEIAKICAN--YDIPHIVNNAYGLQSNKYMELINK 257 (444)
T ss_pred eecCcCCCcCHHHHHHHHHhcc-CCCEEEEEEcCCcCCCcchhCHHHHHHHHHH--cCCEEEEECcCcCcChhhhhhhhc
Confidence 3457899999999998543 245666666654 444578899999999999 999999999999755321 1
Q ss_pred cccc-cceEEEecCCCcccCCCcceeeee-CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHH
Q 017726 187 MDEW-GIDVALTGSQKALSLPTGMGIVCA-SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD 264 (367)
Q Consensus 187 ~~~~-~~d~~~~s~~K~~~g~~g~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~ 264 (367)
.... .+|++++|+||++..|.+.|+++. ++++.+.+.... .+. ..+. ....++.++.
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y----------------~g~----~~~s-~~~~~~~~ll 316 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSY----------------PGR----ASAS-PSLDVLITLL 316 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhc----------------cCC----CCCh-HHHHHHHHHH
Confidence 1112 369999999999986666677766 667776665321 011 0111 1234455555
Q ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCCceEEEEcC--CCCCHHHHHHHHHhhCCe
Q 017726 265 LIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVP--SHINSSEIVRRAWQRYNL 332 (367)
Q Consensus 265 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~gv 332 (367)
.+...|+++++++..++++++.+.|+++ |..++... ....-+.+.+. .+.+...+-..|..+ +|
T Consensus 317 ~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~---~n~is~~~~~~~~~~~~~~~~g~~l~~~-~v 386 (444)
T TIGR03531 317 SLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP---ENPISSAMTLSTLKGKDPTMLGSMLYSR-RV 386 (444)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC---CCceeEEEecccccccCHHHHHHHHHhC-CC
Confidence 6666779999999999999999999885 55555431 11111223331 234566777777544 44
No 273
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.86 E-value=3.1e-19 Score=147.36 Aligned_cols=311 Identities=16% Similarity=0.130 Sum_probs=220.5
Q ss_pred CCcccccCCCCCChHHHHHHHccCCCCCCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCC
Q 017726 8 GKNHLFVPGPVHIPDQVIRAMNRNNEDYRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSP 83 (367)
Q Consensus 8 ~~~~~~~~~p~~~~~~v~~a~~~~~~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~ 83 (367)
+|+|+-....+.+..+..+++.++.....+ -+...+.+.++..||++.+.++ .++.+++-.|+..++.+++.|
T Consensus 74 aNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED---~ilypscfdANag~feail~p 150 (417)
T KOG1359|consen 74 ANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED---TILYPSCFDANAGAFEAILTP 150 (417)
T ss_pred ccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc---eEEeccccccchHHHHHhcCh
Confidence 577887788888888889999998765433 3457889999999999988665 355588889999999899999
Q ss_pred CCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHH
Q 017726 84 GDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKL 162 (367)
Q Consensus 84 gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~ 162 (367)
.|.|+.....|-|.. =..++++ ...+|+-.++..+.+....|-|+|+-....+..|.+.|+++|.++
T Consensus 151 edAvfSDeLNhASIIdGirLckr------------y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~L 218 (417)
T KOG1359|consen 151 EDAVFSDELNHASIIDGIRLCKR------------YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQL 218 (417)
T ss_pred hhhhhccccccchhhhhhHHHhh------------hccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHH
Confidence 998887766665543 1133332 223455555555543221466788888888999999999999999
Q ss_pred HHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 163 LDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 163 ~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+++ ||.++++|++|+-+..- +.+ ...+|++.++.+|.++|..| ||..++++++.-++.. .+++.+
T Consensus 219 a~k--YgaLlfiDecHaTgf~G~tGrGt~E~~~v-m~~vdiinsTLgKAlGga~G-Gyttgp~~li~llrqr-~RpylF- 292 (417)
T KOG1359|consen 219 AKK--YGALLFIDECHATGFFGETGRGTAEEFGV-MGDVDIINSTLGKALGGASG-GYTTGPKPLISLLRQR-SRPYLF- 292 (417)
T ss_pred HHh--cCcEEEEeecccceeecCCCCChHHHhCC-CCcceehhhhhhhhhcCCCC-CCccCChhHHHHHHhc-CCceee-
Confidence 999 99999999999754321 111 13589999999999987776 9999999998877653 223332
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
.++.+...+-....+++.+... ....++.+.+.+++++..+..|+.+.+. +.++..+.+
T Consensus 293 --------------SnslppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aGftIsg~-----~hPI~pv~l 351 (417)
T KOG1359|consen 293 --------------SNSLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAGFTISGA-----SHPICPVML 351 (417)
T ss_pred --------------cCCCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcCceecCC-----CCCccceec
Confidence 2334433333344456665554 4567788899999999999999999885 344566666
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCC--CC-cEEEEeecCCCCHHHHHH
Q 017726 314 PSHINSSEIVRRAWQRYNLSLGLGLNKV--AG-KVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 314 ~~~~~~~~l~~~L~~~~gv~v~~g~~~~--~~-~~iRi~~~~~~~~~~~~~ 361 (367)
.+..-+..+.+.|++. ||+|.....|. ++ -.+|+-+....+++|+++
T Consensus 352 Gda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~ 401 (417)
T KOG1359|consen 352 GDARLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDR 401 (417)
T ss_pred ccHHHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHH
Confidence 5544566788888866 99998554332 23 348887777776666554
No 274
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.86 E-value=5.1e-19 Score=151.11 Aligned_cols=263 Identities=17% Similarity=0.148 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 118 (367)
.+....++++++.+-|--. .+.+.||..|+..++.++..+||.|+....-|.+.. +....+++|+++++++.+
T Consensus 61 NPT~~vlE~RiAaLEGG~a---a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-- 135 (426)
T COG2873 61 NPTTDVLEERIAALEGGVA---ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-- 135 (426)
T ss_pred CchHHHHHHHHHHhhcchh---hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC--
Confidence 3556788999998877544 367789999999999999999999998877666553 556678999999999865
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
|+|.++++|++ +||+|++.+..||.+.+.|+++|.++||+ +|++++||.+-+.+. -+...+.|+|+++.|
T Consensus 136 ---d~~~~~~aI~~----nTkavf~EtigNP~~~v~Die~ia~iAh~--~gvpliVDNT~atpy-l~rP~~hGADIVvHS 205 (426)
T COG2873 136 ---DPENFEAAIDE----NTKAVFAETIGNPGLDVLDIEAIAEIAHR--HGVPLIVDNTFATPY-LCRPIEHGADIVVHS 205 (426)
T ss_pred ---CHHHHHHHhCc----ccceEEEEeccCCCccccCHHHHHHHHHH--cCCcEEEecCCCcce-ecchhhcCCCEEEEe
Confidence 79999999994 67999999999999999999999999999 999999998876542 234445689999999
Q ss_pred CCCcccCC-CcceeeeeCHHHHHHhccCCCCce------ee--chHH------HH-----HHhh-cCCccCCCCcHHHHH
Q 017726 199 SQKALSLP-TGMGIVCASPKALEASKTAKSVRV------FF--DWKD------YI-----KFYN-LGTFWPYTPSIQLLY 257 (367)
Q Consensus 199 ~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~------~~--~~~~------~~-----~~~~-~~~~~~~~~~~~~~~ 257 (367)
.+||++|. ..+|.+++...--+.....+.+.+ |. .+.+ +. +.++ -|. +.+....+
T Consensus 206 ~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa----~lsPfnAf 281 (426)
T COG2873 206 ATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGA----TLSPFNAF 281 (426)
T ss_pred ecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccc----ccCcHHHH
Confidence 99999753 224544433222111111121111 10 1111 11 1111 121 23332222
Q ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc-C----CC---------ccCCCceEEEEcCCCCC-HHH
Q 017726 258 GLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT-Q----KE---------EWFSDTVTAVIVPSHIN-SSE 321 (367)
Q Consensus 258 al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~----~~---------~~~~~~~~~~~~~~~~~-~~~ 321 (367)
.+...++. +.-++++..+|+..+.+.|++. .+.++. | ++ ....+.++.|.+.++.+ .+.
T Consensus 282 l~lqGlET-----L~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~ 356 (426)
T COG2873 282 LLLQGLET-----LSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKK 356 (426)
T ss_pred HHHhchhh-----hHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHH
Confidence 22222222 4456888999999999999997 444433 1 11 12345588888854432 345
Q ss_pred HHHHHH
Q 017726 322 IVRRAW 327 (367)
Q Consensus 322 l~~~L~ 327 (367)
+++.|+
T Consensus 357 fi~~l~ 362 (426)
T COG2873 357 FIDALK 362 (426)
T ss_pred HHHHHH
Confidence 655553
No 275
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.85 E-value=4.4e-20 Score=165.65 Aligned_cols=269 Identities=15% Similarity=0.179 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC--
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (367)
.....+.++..|+.+|++. ...+++|+|.++..++.+++.+||+|++..+.|-|.. ..+...|+++++++....
T Consensus 65 ~G~I~eAe~~aA~~fGAd~--t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~--~alil~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADK--TFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY--NALILSGAIPVYIPPEDNEY 140 (417)
T ss_dssp BTHHHHHHHHHHHHHTESE--EEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH--HHHHHHTEEEEEEEEEE-TT
T ss_pred ccHHHHHHHHHHHhcCCCe--EEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH--HHHHHcCCeEEEecCCcccc
Confidence 3567899999999999987 4688899999999999999999999999999887754 457778999988876421
Q ss_pred ---CCCCH-----HHHHHHHhccCCC-CccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC---c-eee
Q 017726 119 ---EGAKL-----DVLASKLAADTAH-TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC---A-IDF 185 (367)
Q Consensus 119 ---~~~d~-----e~l~~~i~~~~~~-~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~---~-~~~ 185 (367)
+.+++ +.+++++++++.. .++++++++| |..|.+.|+++|.++|++ ++++|++|+||+.- . ++-
T Consensus 141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~--~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHK--HGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCC--TECEEEEE-TT-TTGGCSGGGT
T ss_pred CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcc--cCCEEEEEccccccccCCCCcc
Confidence 23466 9999999987521 1345888876 689999999999999999 99999999998742 1 112
Q ss_pred ccccccce-------EEEecCCCcccCCCcceeeeeCHHH---HHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHH
Q 017726 186 RMDEWGID-------VALTGSQKALSLPTGMGIVCASPKA---LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQL 255 (367)
Q Consensus 186 ~~~~~~~d-------~~~~s~~K~~~g~~g~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (367)
+....++| +++-|.||++++....+++..+.+. .+++... ..+-. ..+|+...
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-------------l~~~~----TTSPSY~l 280 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-------------LSMHQ----TTSPSYPL 280 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-------------HHHHS-----SS--HHH
T ss_pred chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-------------HHHHc----CCChHHHH
Confidence 23345788 9999999999988888888877663 2233211 11111 23689999
Q ss_pred HHHHHHHHHHH-HHhChHHHHHHHHHHHHHHHHHHHH---c-CCccccCCCc-------------------------cCC
Q 017726 256 LYGLRAALDLI-FEEGLENVIERHRRLGKATRLAVEA---W-GLKNCTQKEE-------------------------WFS 305 (367)
Q Consensus 256 ~~al~~al~~~-~~~g~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~-------------------------~~~ 305 (367)
++++..+.+.+ ...| ++..++..+++..+++.+++ . ++.+..++.- ...
T Consensus 281 mASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lD 359 (417)
T PF01276_consen 281 MASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLD 359 (417)
T ss_dssp HHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-
T ss_pred HHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccC
Confidence 99999999999 5665 56777888888889999854 2 5665554210 012
Q ss_pred CceEEEEcC----------CCCCHHHHHHHHHhhCCeEEc
Q 017726 306 DTVTAVIVP----------SHINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 306 ~~~~~~~~~----------~~~~~~~l~~~L~~~~gv~v~ 335 (367)
..-+.+.+| .|+++..+.++|.++ ||.+-
T Consensus 360 P~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~-~I~~E 398 (417)
T PF01276_consen 360 PTKLTINTPGIDADGELSELGIPGYIVEKYLREH-GIQVE 398 (417)
T ss_dssp TTEEEEE-STBETTSSB-SS---HHHHHHHHHHT-TEE-S
T ss_pred CcEEEEEccCcCcCCcccccCCCHHHHHHHHHHc-CCEEE
Confidence 222334432 356778888888765 98874
No 276
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.85 E-value=9.7e-19 Score=157.52 Aligned_cols=265 Identities=14% Similarity=0.123 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC----
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD---- 116 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 116 (367)
...+.++++.+++++|.+. +++++||+.|++++....++|||.| +.+.++.... ...+..|..++.++.+
T Consensus 70 ~~s~~~lE~~va~~~G~~~---av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~-ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 70 SRNFYHLERTVRELYGFKY---VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTR-YHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCcHHHHHHHHHHHHCCCe---EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHH-HHHHhCCeEEEeeecccccc
Confidence 3446699999999999876 8999999999988777778999976 4455555432 2246778876666443
Q ss_pred ------CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc-cccc---cHHHHHHHHHhcCCCcEEEEeeeeccCc-e--
Q 017726 117 ------WGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTN---NLSKVRKLLDEYRHPALFLVDGVSSICA-I-- 183 (367)
Q Consensus 117 ------~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t-G~~~---~~~~i~~~~~~~~~~~~vi~D~~~~~~~-~-- 183 (367)
..+.+|+++++++|++...+++++|.+..++|.. |... +++++.++|++ +|+.||.|+++.++. .
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~--~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEA--HGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHH--cCCEEEEEccchhhChhhh
Confidence 3577899999999987432456788888888866 7775 47899999999 999999999987642 1
Q ss_pred --------eeccc------cccceEEEecCCCcccCCCcceeee-eCHHHHHHhccCCCCceeechHHHHHHhhcCCccC
Q 017726 184 --------DFRMD------EWGIDVALTGSQKALSLPTGMGIVC-ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWP 248 (367)
Q Consensus 184 --------~~~~~------~~~~d~~~~s~~K~~~g~~g~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (367)
..+.. -..+|.+++|++|...++.| |+++ .+++++++.+..... + .|..+.
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~------------~-eG~~ty 287 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVV------------F-EGMPSY 287 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhh------------c-CCcccc
Confidence 11110 11589999999999987877 6666 788888877654211 1 011112
Q ss_pred CCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCC--------CCCHH
Q 017726 249 YTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPS--------HINSS 320 (367)
Q Consensus 249 ~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 320 (367)
+......+.++..++....+. ....+....+++|.+.|++.|++++.| ..++.++++..+ ..++.
T Consensus 288 Ggla~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~Gvpv~~p----~ggh~V~vda~~~lph~~~~~~p~~ 360 (450)
T TIGR02618 288 GGLAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAAGVPIVEP----VGGHAVFLDARRFLPHIPQDQFPAQ 360 (450)
T ss_pred CchhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHCCCcccCC----CCcceEEEEhHHhCCCCChhhChHH
Confidence 223333445555555554332 233445567899999999999999776 345567676521 23455
Q ss_pred HHHHHHHhhCCeEE
Q 017726 321 EIVRRAWQRYNLSL 334 (367)
Q Consensus 321 ~l~~~L~~~~gv~v 334 (367)
.|+-+|..+.||--
T Consensus 361 al~~~ly~~~gir~ 374 (450)
T TIGR02618 361 SLAASIYVETGVRS 374 (450)
T ss_pred HHHHHHHHHhCccE
Confidence 67777777767643
No 277
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=3.8e-19 Score=144.47 Aligned_cols=286 Identities=17% Similarity=0.143 Sum_probs=196.2
Q ss_pred HHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCC-CeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHH
Q 017726 47 LLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPG-DRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDV 125 (367)
Q Consensus 47 ~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~g-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~ 125 (367)
++..+++--++.+ +.+.+..|+-+.+.+++++.+.|| ++|+..+| .||.+. .-+...+++++.+|.++++.++.|+
T Consensus 74 ls~a~~~dkpLt~-dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPP-tysMY~-v~A~iNd~eVvkvpl~pdF~lnvda 150 (375)
T KOG0633|consen 74 LSDALAQDKPLTS-DNICVGVGSDELIDLIIRCVCDPGKEKILDCPP-TYSMYV-VDAAINDAEVVKVPLNPDFSLNVDA 150 (375)
T ss_pred hhhhcccCCCCCc-cceEEecCcHHHHHHHHhheecCCccceeecCC-cceeEE-EEeecCCceEEEecCCCCccccHHH
Confidence 3333443333444 347777777899999999999999 78888877 455542 2245578999999999999999999
Q ss_pred HHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCcee---e-ccccccceEEEecCCC
Q 017726 126 LASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID---F-RMDEWGIDVALTGSQK 201 (367)
Q Consensus 126 l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---~-~~~~~~~d~~~~s~~K 201 (367)
+.+.++.. .++|.+++++|+||||.+...+.|.++.+. +.|.+|++|++|--++-. . -+.+...-++.-++||
T Consensus 151 i~evl~~d--s~iK~~F~tSPgNPtg~~ik~~di~KiLe~-p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 151 IAEVLELD--SKIKCIFLTSPGNPTGSIIKEDDILKILEM-PDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred HHHHHhcc--ccceEEEEcCCCCCCcccccHHHHHHHHhC-CCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhh
Confidence 99998865 488999999999999999998888888875 348899999998533221 1 1223344577778899
Q ss_pred cccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC---hHHHHH
Q 017726 202 ALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG---LENVIE 276 (367)
Q Consensus 202 ~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g---~~~~~~ 276 (367)
.| |..| +|+-+.+.++++-+...+. |+..+. .+..+||+.+.... ++..+.
T Consensus 228 sf-GLAGiRvG~~~~~~~ia~iln~~Ka--------------------PYNiS~---~~s~~AL~Als~~n~kkme~~rd 283 (375)
T KOG0633|consen 228 SF-GLAGIRVGYGAFPLSIAEILNRAKA--------------------PYNISV---AGSVAALAALSDSNGKKMEDVRD 283 (375)
T ss_pred hc-CcceeEeecccccHHHHHHHHhccC--------------------Cccccc---hhHHHHHHhcCcccchHHHHHHH
Confidence 88 5666 4888888888776654332 222333 34455666655332 666677
Q ss_pred HHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCC--CHHHHHHHHHhhCCeEEc-cCCCCCCCcEEEEeecC
Q 017726 277 RHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI--NSSEIVRRAWQRYNLSLG-LGLNKVAGKVFRIGHLG 352 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~~gv~v~-~g~~~~~~~~iRi~~~~ 352 (367)
.+.+.+.+|...|... ++.-+. .+ ..++ ++.+++..+- -++.+...+..++||.|+ .|......+++||+ .|
T Consensus 284 aiv~er~RL~keLt~v~~~~~~~-gg-~daN-FiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRit-vG 359 (375)
T KOG0633|consen 284 AIVRERERLFKELTEVPFLNDYP-GG-SDAN-FILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT-VG 359 (375)
T ss_pred HHHHHHHHHHHHhhcCccccCCC-Cc-cccc-EEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEE-cC
Confidence 7777777888888776 333111 11 1344 4556663332 245666677778899998 45556677899997 68
Q ss_pred CCCHHHHHHhhhhc
Q 017726 353 HLNEVMFNFQLLFQ 366 (367)
Q Consensus 353 ~~~~~~~~~~~l~~ 366 (367)
+.++-+...+-+++
T Consensus 360 t~EentvL~k~~K~ 373 (375)
T KOG0633|consen 360 TPEENTVLMKCLKQ 373 (375)
T ss_pred CcccchHHHHHHHh
Confidence 77777776665554
No 278
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.84 E-value=4.2e-18 Score=157.28 Aligned_cols=299 Identities=18% Similarity=0.177 Sum_probs=193.3
Q ss_pred hHHHHHHHccCCCC--CCCCc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---------CCCC-CeE
Q 017726 21 PDQVIRAMNRNNED--YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---------LSPG-DRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~-~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---------~~~g-d~v 87 (367)
.+++.+++.+.... +.+.. ..+...++.+.++++++.+ .+++++||++|+..++... ..+| +.|
T Consensus 55 ~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i 131 (401)
T TIGR01885 55 HPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGYD---KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAII 131 (401)
T ss_pred CHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCCC---EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEE
Confidence 56777777664321 22221 3466788999999998742 5899999999999988753 1233 455
Q ss_pred EEEeCCcchHHHHHHHHH--------hC---CceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-
Q 017726 88 ISFLIGQFSLLWIDQQQR--------LN---FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN- 155 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~--------~g---~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~- 155 (367)
+.....|++..+...... .+ ..+..++.+ |++++++++++.. +++.+|++..+++++|.+.|
T Consensus 132 ~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~-~~~~avi~E~v~~~~G~~~~~ 205 (401)
T TIGR01885 132 VSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHG-PNVCAFIVEPIQGEAGVVVPD 205 (401)
T ss_pred EEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcC-CCEEEEEEeCccCCCCCccCC
Confidence 556556665432222211 11 112223222 7899999887543 46788899999999999987
Q ss_pred ---HHHHHHHHHhcCCCcEEEEeeeeccCce---e--eccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCC
Q 017726 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAI---D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAK 226 (367)
Q Consensus 156 ---~~~i~~~~~~~~~~~~vi~D~~~~~~~~---~--~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~ 226 (367)
+++|.++|++ +|+++++|++|..... . ........|++++ +|.+++. ..+|+++.++++++.+....
T Consensus 206 ~~~l~~l~~l~~~--~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~~ig~v~~~~~i~~~~~~~~ 281 (401)
T TIGR01885 206 DGYLKKVRELCTK--HNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVYPVSAVLADDDVMLTIKPGE 281 (401)
T ss_pred HHHHHHHHHHHHH--cCCEEEEechhhCCCccchhhHHhhcCCCCCEEEe--eccccCCCCCcEEEEEcHHHHhhccCCC
Confidence 8999999999 9999999999753211 1 1222345687765 4988653 34688999999887665311
Q ss_pred CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 227 SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
. +. .++.+...+.+..++++.+.+++ +.++..++.+++++.|++++..++..-. ..+
T Consensus 282 ~----------------~~--t~~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~~~--g~g 338 (401)
T TIGR01885 282 H----------------GS--TYGGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITEVR--GRG 338 (401)
T ss_pred C----------------CC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeEEe--ecC
Confidence 0 11 22344555677777888877654 3457777899999999998544433111 133
Q ss_pred ceEEEEcCCC---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 307 TVTAVIVPSH---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 307 ~~~~~~~~~~---~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.++.+.++++ .+..++++.|.++ ||.+.++ .+..+||+++...+++++.
T Consensus 339 ~~~~i~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~----~~~~lRi~p~l~~t~~~i~ 390 (401)
T TIGR01885 339 LLNAIVIDESKTGRTAWDLCLKLKEK-GLLAKPT----HGNIIRLAPPLVITEEQLD 390 (401)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHhC-CEEEEec----CCCEEEEeCCccCCHHHHH
Confidence 4555555332 2467899999754 9998753 2468999987666665544
No 279
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.83 E-value=7.2e-18 Score=159.21 Aligned_cols=280 Identities=14% Similarity=0.099 Sum_probs=191.9
Q ss_pred CCCcccccCCCCCChHHHHHHHccCCCC-----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-
Q 017726 7 PGKNHLFVPGPVHIPDQVIRAMNRNNED-----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT- 80 (367)
Q Consensus 7 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~- 80 (367)
|+|.....++|+.+|.-+.+.+.-..+. ..++....+..++-+++++++|.+... -++|+|||.|+..++...
T Consensus 83 P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~-G~~TsGGT~ANl~aL~~AR 161 (608)
T TIGR03811 83 AGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGW-GHIVADGSLANLEGLWYAR 161 (608)
T ss_pred ccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCC-eEEeCChHHHHHHHHHHHH
Confidence 4577777887776666555555543332 235666788889999999999998643 679999999998755421
Q ss_pred --C-CC------------------------------------------------CC------eEEEEeCCcchHHHHHHH
Q 017726 81 --L-SP------------------------------------------------GD------RIISFLIGQFSLLWIDQQ 103 (367)
Q Consensus 81 --~-~~------------------------------------------------gd------~vl~~~~~~~~~~~~~~~ 103 (367)
. .| |. +++++...|+| +.+.+
T Consensus 162 ~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS--~~KAa 239 (608)
T TIGR03811 162 NIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS--WLKAA 239 (608)
T ss_pred HhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHH--HHHHH
Confidence 0 00 00 35555555766 55788
Q ss_pred HHhCC---ceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCccccccHHHHHHHHHh-cCCCc--EEEEe
Q 017726 104 QRLNF---NVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPA--LFLVD 175 (367)
Q Consensus 104 ~~~g~---~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~-~~~~~--~vi~D 175 (367)
..+|+ +++.||++.++++|+++|+++|++... ..+-+|+.+...+.+|.+.|+++|.++|++ ..+|+ |+++|
T Consensus 240 ~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVD 319 (608)
T TIGR03811 240 DIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVD 319 (608)
T ss_pred HHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeee
Confidence 88888 589999999999999999999975210 234567888999999999999999999943 22787 69999
Q ss_pred eeeccCc--eeec--------------------c----------------ccccceEEEecCCCcccCCCcceeeeeCHH
Q 017726 176 GVSSICA--IDFR--------------------M----------------DEWGIDVALTGSQKALSLPTGMGIVCASPK 217 (367)
Q Consensus 176 ~~~~~~~--~~~~--------------------~----------------~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~ 217 (367)
+|++... +..+ + .-..+|.++..+||++..|.++|.+++++.
T Consensus 320 AAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 320 AAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred ccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 9998642 1111 0 012689999999999999999998888766
Q ss_pred HHHHhccCCCCceeec--hHHHHHHhhcCCcc-CCCCcHHHHHHHHHHHHHH--HHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 218 ALEASKTAKSVRVFFD--WKDYIKFYNLGTFW-PYTPSIQLLYGLRAALDLI--FEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~al~~al~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
.......... .|.. ...... ..+.+. -++.+-...++++.+++.+ ...|+.++.++..++++++.+.|+++
T Consensus 400 ~~~~~~~~~a--~Yl~~~~~~~p~--~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 400 RMRDVISYFA--TYVFEKGADIPA--LLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHhcCc--chhccccccCcc--cccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4433322211 1110 000000 001110 1122334457888888887 77889999999999999999999985
Q ss_pred C
Q 017726 293 G 293 (367)
Q Consensus 293 g 293 (367)
+
T Consensus 476 ~ 476 (608)
T TIGR03811 476 E 476 (608)
T ss_pred c
Confidence 3
No 280
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.82 E-value=1e-17 Score=147.33 Aligned_cols=213 Identities=19% Similarity=0.161 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 119 (367)
+....+++.++++.|... ++..+||..|+..++..++.+|++++.....|.+.+ +.......|++...++.+
T Consensus 77 Pt~~~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~--- 150 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAAH---ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD--- 150 (409)
T ss_pred CchHHHHHHHHHHhCCce---EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh---
Confidence 446688889999998776 456688899999999999999999999988777764 556777899999888876
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
|++.++++++ +++++|++.+|.||+..+.|++++.++||+ +|++|++|++-+.+ ...+....|+|+++.|.
T Consensus 151 --~~~~~~~~i~----~~t~~V~~ESPsNPll~v~DI~~l~~la~~--~g~~vvVDnTf~~p-~~~~pL~lGADIV~hSa 221 (409)
T KOG0053|consen 151 --DLKKILKAIK----ENTKAVFLESPSNPLLKVPDIEKLARLAHK--YGFLVVVDNTFGSP-YNQDPLPLGADIVVHSA 221 (409)
T ss_pred --hHHHHHHhhc----cCceEEEEECCCCCccccccHHHHHHHHhh--CCCEEEEeCCcCcc-cccChhhcCCCEEEEee
Confidence 6889999998 467999999999999999999999999999 99999999997754 34566667899999999
Q ss_pred CCcccCCCcc--eeeeeC-HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHH
Q 017726 200 QKALSLPTGM--GIVCAS-PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIE 276 (367)
Q Consensus 200 ~K~~~g~~g~--g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~ 276 (367)
+|+|+|...+ |.++.+ +++.+++.... + .-| +.++.....-+...++. +.-+++
T Consensus 222 TKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-------------~-~lg----~~~~p~~~~ll~Rglkt-----l~lRi~ 278 (409)
T KOG0053|consen 222 TKYIGGHSDVIGGSVVLNSEELASRLKFLQ-------------E-DLG----WCEDPFDLFLLSRGLKT-----LHLRIN 278 (409)
T ss_pred eeeecCCcceeeeEEecCcHHHHHHHHHHH-------------H-Hhc----CCCCHHHHHHHhcCcch-----hhhhHH
Confidence 9999987553 777775 77766665321 0 012 23554322222212211 333566
Q ss_pred HHHHHHHHHHHHHHHc
Q 017726 277 RHRRLGKATRLAVEAW 292 (367)
Q Consensus 277 ~~~~~~~~l~~~L~~~ 292 (367)
+..+++..+.+.|++.
T Consensus 279 ~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 279 KHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHhhhC
Confidence 6777777788888775
No 281
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.82 E-value=1.9e-17 Score=151.88 Aligned_cols=269 Identities=13% Similarity=0.090 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-C-CCCCeEEEEeCCcchHHHHHHHHHhCC------------
Q 017726 43 LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-L-SPGDRIISFLIGQFSLLWIDQQQRLNF------------ 108 (367)
Q Consensus 43 ~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~-~~gd~vl~~~~~~~~~~~~~~~~~~g~------------ 108 (367)
...++.+.+.+..+. +.+++++||++|+..++... . ..+++|++.++.|++....... ..+.
T Consensus 72 ~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~ 147 (377)
T PRK02936 72 LQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLP 147 (377)
T ss_pred HHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCC
Confidence 334444444443332 35899999999999998742 2 2345788888888865422221 1121
Q ss_pred ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-
Q 017726 109 NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI- 183 (367)
Q Consensus 109 ~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~- 183 (367)
.+..++. .|++++++.+. +++++|++..++++.|...+ +++|.++|++ +|+++|+|++|.....
T Consensus 148 ~~~~~~~-----~d~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~--~~~~lI~DEv~~g~g~~ 216 (377)
T PRK02936 148 GFTHVPF-----NDIKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKK--FGALLIIDEVQTGIGRT 216 (377)
T ss_pred CceEeCC-----CCHHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcC
Confidence 1112221 17899999886 46799999999999887753 8899999999 9999999999863221
Q ss_pred --eecc--ccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHH
Q 017726 184 --DFRM--DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (367)
Q Consensus 184 --~~~~--~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 259 (367)
.+.. .....|++ +.+|.+++...+|++++++++.+.+..... . ..+..+...+++.
T Consensus 217 g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~----------------~--~t~~~~~~~~aaa 276 (377)
T PRK02936 217 GTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKKELGTAFGPGSH----------------G--STFGGNPLAMAAA 276 (377)
T ss_pred chhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcHHHHhhccCCCC----------------C--CCCCCCHHHHHHH
Confidence 1111 11234654 568999644347999999998777653210 1 1224566666777
Q ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccC
Q 017726 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLG 337 (367)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g 337 (367)
.++++.+... ...++..++.+++++.|++. ++.....-. ..+.++++.+++ +..++.+.|.+ .||.+.++
T Consensus 277 ~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~--~~g~~~~i~~~~--~~~~~~~~l~~-~gv~v~~~ 348 (377)
T PRK02936 277 KEVLQVIKQP---SFLEEVQEKGEYFLQKLQEELEHLECVKNIR--GKGLMIGIECTE--EVAPVIEQLRE-EGLLVLSA 348 (377)
T ss_pred HHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe--ecceEEEEEecc--hHHHHHHHHHH-CCeEEecC
Confidence 7788776443 34456777888888888773 344332111 133567787743 36678887755 59998763
Q ss_pred CCCCCCcEEEEeecCCCCHHH
Q 017726 338 LNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 338 ~~~~~~~~iRi~~~~~~~~~~ 358 (367)
- .+.+|+++....++++
T Consensus 349 g----~~~lRi~p~~~~~~~~ 365 (377)
T PRK02936 349 G----PNVIRLLPPLVVTKEE 365 (377)
T ss_pred C----CCEEEEECCcccCHHH
Confidence 2 3689999755555443
No 282
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.82 E-value=1.3e-17 Score=150.63 Aligned_cols=265 Identities=13% Similarity=0.069 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES------ 115 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~------ 115 (367)
..+.++++.+++++|.+. ++.+++||.|+++++...+.+||.| +...++.... ...+..|.....+..
T Consensus 78 ~s~~~LE~~vAe~lG~e~---aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~-ahI~~~Ga~fvDi~~d~a~~~ 151 (460)
T PRK13237 78 RNFYHLEETVQEYYGFKH---VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTR-YHQELNGGIFVDIIIDEAHDA 151 (460)
T ss_pred CcHHHHHHHHHHHHCCCe---EEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhH-HHHHhCCcEEEeeeccccccc
Confidence 346689999999999876 7899999999998776678899964 4343454432 224667775555531
Q ss_pred ----CCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc-cccc---cHHHHHHHHHhcCCCcEEEEeeeeccCcee---
Q 017726 116 ----DWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT-GVTN---NLSKVRKLLDEYRHPALFLVDGVSSICAID--- 184 (367)
Q Consensus 116 ----~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t-G~~~---~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~--- 184 (367)
+..+.+|++.++++|++.+.++++++.+..++|.. |... +++++.++|++ +|+.||.|+++.++...
T Consensus 152 ~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~--~Gl~Vi~DaAra~gna~fI~ 229 (460)
T PRK13237 152 QSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDK--HGIKVFFDATRCVENAYFIK 229 (460)
T ss_pred ccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHH--cCCEEEEECcchhcChhhhc
Confidence 23578999999999987543566788888888888 5665 67999999999 99999999998876321
Q ss_pred -----e---ccc------cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 185 -----F---RMD------EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 185 -----~---~~~------~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+ +.. -...|.+++|++|.+.++.|..++.-++++.++++....... |.-+.+.
T Consensus 230 ~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~e-------------G~~tygg 296 (460)
T PRK13237 230 EREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYE-------------GMPSYGG 296 (460)
T ss_pred ccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccC-------------CCcCCCC
Confidence 1 110 014799999999999877763444456667777765422110 1101222
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc----C----CCCCHHHH
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV----P----SHINSSEI 322 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~l 322 (367)
.+.-.+.++..++....+. ...++.....++|.+.|++.|++++.| .+++.++++. | ...++..|
T Consensus 297 ~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~p----~ggH~v~vda~~~lph~~~~~~p~~al 369 (460)
T PRK13237 297 MAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVEP----VGGHAVFLDARRFLPHLPQDQFPAQAL 369 (460)
T ss_pred hhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceecC----CCceEEEEEhHHhCCCCCcccChHHHH
Confidence 3233445555555544333 445556678899999999999999987 3445566654 1 12355678
Q ss_pred HHHHHhhCCeEE
Q 017726 323 VRRAWQRYNLSL 334 (367)
Q Consensus 323 ~~~L~~~~gv~v 334 (367)
+-.|..+.||--
T Consensus 370 ~~~ly~~~GiR~ 381 (460)
T PRK13237 370 AAELYIESGVRS 381 (460)
T ss_pred HHHHHHHhCcCe
Confidence 888877767644
No 283
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.82 E-value=1.3e-17 Score=154.15 Aligned_cols=271 Identities=15% Similarity=0.114 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---C-----CCCCeEEEEeCCcchHHHHHHHHHhC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---L-----SPGDRIISFLIGQFSLLWIDQQQRLN------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~-----~~gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (367)
+...++.+.++++.+. +.+.+++||++|+..++... . ...++|+..+..|++..+. .....+
T Consensus 82 ~~~~~l~~~l~~~~~~---~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~-~~~~~~~~~~~~ 157 (403)
T PRK05093 82 EPALRLAKKLIDATFA---ERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLF-TVSVGGQPKYSD 157 (403)
T ss_pred HHHHHHHHHHHhhCCC---CEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhh-hHhhcCChhhhh
Confidence 3345888888887653 35899999999999988742 1 1245688888777775421 111111
Q ss_pred ------CceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-c----HHHHHHHHHhcCCCcEEEEee
Q 017726 108 ------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-N----LSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 108 ------~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~----~~~i~~~~~~~~~~~~vi~D~ 176 (367)
.++..++.+ |++++++.+. +++++|+++ |.|++|.+. + +++|+++|++ ||+++|+|+
T Consensus 158 ~~~~~~~~~~~~~~~-----d~~~l~~~l~----~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~--~g~~lI~DE 225 (403)
T PRK05093 158 GFGPKPADITHVPFN-----DLAAVKAVID----DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQ--HNALLIFDE 225 (403)
T ss_pred cCCCCCCCcEEeCCC-----CHHHHHHHhc----CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEec
Confidence 112222222 7899999886 467888888 556665443 3 8899999999 999999999
Q ss_pred eeccCcee---ec--cccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCC
Q 017726 177 VSSICAID---FR--MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (367)
Q Consensus 177 ~~~~~~~~---~~--~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (367)
+|+..... .. ......|+. |.+|.+++...+|++++++++++.+..... +. .+..
T Consensus 226 v~~g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~vv~~~~i~~~l~~~~~----------------~~--t~~~ 285 (403)
T PRK05093 226 VQTGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTAEIASHFKVGTH----------------GS--TYGG 285 (403)
T ss_pred hhhCCCCCccchhhhhcCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCC----------------CC--CCCC
Confidence 98732211 11 112235644 568998654447999999998877753211 11 2234
Q ss_pred cHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCCceEEEEcCCCC--CHHHHHHHHH
Q 017726 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSHI--NSSEIVRRAW 327 (367)
Q Consensus 252 ~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~ 327 (367)
+...+++..++++.+.+. +..++++++.+++.+.|++++ +.+...-+ ..+.++++.+++.. +..++++.|.
T Consensus 286 ~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~G~~~~~~l~~~~~~~~~~~~~~l~ 360 (403)
T PRK05093 286 NPLACAVAEAVFDIINTP---EVLEGVKARRQRFVDGLQKINQKYGVFSEIR--GMGLLIGAELKPQYKGRARDFLNAAA 360 (403)
T ss_pred CHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeEeEe--eCceEEEEEecCcchhHHHHHHHHHH
Confidence 555556667777776543 345688889999999998863 22221100 23456777764432 4568999997
Q ss_pred hhCCeEEccCCCCCCCcEEEEeecCCCCHHH
Q 017726 328 QRYNLSLGLGLNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 328 ~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~ 358 (367)
++ ||.+.++ ..+++|+++....++++
T Consensus 361 ~~-Gv~v~~~----g~~~lRl~~~~~~~~~~ 386 (403)
T PRK05093 361 EE-GVMVLVA----GPDVLRFAPSLVIEEAD 386 (403)
T ss_pred HC-CeEEecC----CCCEEEEeCCCCCCHHH
Confidence 65 9998863 23679997655555444
No 284
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.81 E-value=2.9e-18 Score=140.86 Aligned_cols=331 Identities=16% Similarity=0.188 Sum_probs=230.8
Q ss_pred CCCCCCcccccCCCCCChHHHHHHHccCC------------CCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecC-Chh
Q 017726 4 MYAPGKNHLFVPGPVHIPDQVIRAMNRNN------------EDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPT-TGT 70 (367)
Q Consensus 4 ~~~~~~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~-ggt 70 (367)
|..|.+..+|.|||..+|..|+..+.+.. .+||+.++..+.++.+..+++++++++...|+|.. |||
T Consensus 2 ~~a~~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt 81 (370)
T KOG2790|consen 2 MDAPERVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGT 81 (370)
T ss_pred CCCccceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCc
Confidence 45689999999999999999999988842 24677788899999999999999999877776655 456
Q ss_pred HHHHHHHHccC--CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEe-CCC-C--CCCCHHHHHHHHhccCCCCccEEEEE
Q 017726 71 GAWESALTNTL--SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVE-SDW-G--EGAKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 71 ~al~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~-~~~-~--~~~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
+-+-.+...+. ..|+..-....+.||.....-++.+|..-..++ ..+ . .-+|.+.++. + ++.+.+++|
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~----~da~yvyyC 155 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--N----PDASYVYYC 155 (370)
T ss_pred ccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--C----CCccEEEEe
Confidence 66555544444 445433333355677664456677775533333 221 1 2234444432 2 355799999
Q ss_pred ecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhcc
Q 017726 145 HNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKT 224 (367)
Q Consensus 145 ~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~ 224 (367)
...+..|.-.+.-. . ..++|+++++|..+-+.+.++|+.. .+++..+.+|.+ |+.|+-+++++++++.+...
T Consensus 156 aNETVHGVEf~~~P---~--~~~~~~vlVaDmSSnflSrpvDvsk--~gvi~aGAQKN~-G~aG~Tvvivr~dllg~~~~ 227 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP---V--NDPKGAVLVADMSSNFLSRPVDVSK--FGVIFAGAQKNV-GPAGVTVVIVRKDLLGNALD 227 (370)
T ss_pred cCceeeceecCCCC---C--CCCCCceEEEecccchhcCCccchh--cceEEecccccc-CccccEEEEEehhhhccccc
Confidence 99999998775332 1 1348999999999999999999985 568888999999 69999999999999876554
Q ss_pred CCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 017726 225 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (367)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (367)
.. +..++|.... .+....+|+|...+..+...++|+.+.| ++.+.+..++.++.+++.+.+. |+...+-++.
T Consensus 228 ~t--P~v~dyk~~~----~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~ 301 (370)
T KOG2790|consen 228 IT--PSVLDYKIMD----KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPS 301 (370)
T ss_pred CC--ccccceeeec----cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchh
Confidence 31 1122221111 2333567899999999999999998886 9999999999999999999997 8877776666
Q ss_pred cCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH
Q 017726 303 WFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
.++-.-+.|++.++.=.++|.+...+++-+.+. |. ..-+.+|.|+++..+-+
T Consensus 302 ~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LK-Gh--RSVGGiRASlYNAisv~ 353 (370)
T KOG2790|consen 302 VRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLK-GH--RSVGGIRASLYNAISVE 353 (370)
T ss_pred hhhhcccceeecchHHHHHHHHHHHHhhhhccc-cc--cccccchhhhhccccHH
Confidence 677767888885322223444444344344332 11 11245999998876544
No 285
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.81 E-value=9.6e-20 Score=158.35 Aligned_cols=256 Identities=18% Similarity=0.177 Sum_probs=172.6
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL- 98 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~- 98 (367)
..+++++++.+....+..|+......++++.+++++|.+. .+|+.+||.|+.+++.+++.|++.|+...+.|....
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e~---a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E 83 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKEA---ALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDE 83 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSSE---EEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSS
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCCE---EEEeCCCChHHHHHHHHHHhcCCceeccccceeeeec
Confidence 4566788887766555567777899999999999999775 578999999999999998899999999888665543
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCc-ccccc---HHHHHHHHHhcCCCcEE
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETAT-GVTNN---LSKVRKLLDEYRHPALF 172 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~t-G~~~~---~~~i~~~~~~~~~~~~v 172 (367)
........|.++..++.+.++.+|+++|++.+.+... .++++|++++++|.. |.+++ +++|.++||+ +|+.+
T Consensus 84 ~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~--~gl~l 161 (290)
T PF01212_consen 84 TGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE--HGLPL 161 (290)
T ss_dssp TTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH--HT-EE
T ss_pred cchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh--CceEE
Confidence 2233466899999999876689999999999998432 578999999998875 67775 6678888999 99999
Q ss_pred EEeeee---ccCcee---eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCc
Q 017726 173 LVDGVS---SICAID---FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (367)
Q Consensus 173 i~D~~~---~~~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
+.|++= +..... -+.. .++|++++|++|.++.+.| ++++++++++++...+. +++- |..
T Consensus 162 hmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~G-avl~~~~~~i~~~~~~~------------k~~g-g~~ 226 (290)
T PF01212_consen 162 HMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGG-AVLAGNKEFIAKARRQR------------KRLG-GGM 226 (290)
T ss_dssp EEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSE-EEEEESHHHHHHHHHHH------------HHHT-HHH
T ss_pred EEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccc-eEEEechHHHHHHHHHH------------HHhc-cCe
Confidence 999872 111111 1222 3799999999999865554 99999999766543210 1111 100
Q ss_pred cCCCCcHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccC
Q 017726 247 WPYTPSIQLLYGL--RAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQ 299 (367)
Q Consensus 247 ~~~~~~~~~~~al--~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 299 (367)
. ...+.....+ ..++..+ +. ......+..+.++.+.+.|+..+..+..+
T Consensus 227 -~-~~G~~~a~~~~~~~~l~~l-~~-~~~~~~~~~~~A~~La~~l~~~~~~~~~~ 277 (290)
T PF01212_consen 227 -R-QAGVLAAAELYQFAALRAL-EL-WLERARHANAMAKRLAAGLEALGGVLPRP 277 (290)
T ss_dssp -H-HTTHHHHHHHHHHHHHCHE-EC-SHHHHHCHHHHHHCHHHCHHEECEEEETT
T ss_pred -e-ecceeeeechhhHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 0 0001110000 1122111 11 23456677788999999998887655443
No 286
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=3.7e-17 Score=157.25 Aligned_cols=228 Identities=11% Similarity=0.064 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-C
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G 118 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~ 118 (367)
+.....+.++..|+.+|++. ...++||+|.++.+++++.+.+||+|++..+.|=|.. ..+...|++++++.... .
T Consensus 203 p~G~I~eAq~~aA~~fgA~~--t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~--~al~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADR--SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE--QGLILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCc--EEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeEEEecccccc
Confidence 34667899999999999987 4688899999999999999999999999999887754 45778899999886432 1
Q ss_pred ----CCCC-----HHHHHHHHhccCC------CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC--
Q 017726 119 ----EGAK-----LDVLASKLAADTA------HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-- 181 (367)
Q Consensus 119 ----~~~d-----~e~l~~~i~~~~~------~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~-- 181 (367)
+.++ ++.+++++++++. ++++++++++| |..|.+.|+++|.++|++ ++++|++|+||+.-
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~--~~~~llvDEAhGah~~ 355 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEK--TSDRLHFDEAWYGYAR 355 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHh--cCCeEEEECccccccc
Confidence 2344 8999999987641 23448888876 689999999999999999 99999999998751
Q ss_pred -ceeec----c-----ccccce-EEEecCCCcccCCCcceeeeeCHH--HH--HHhccCCCCceeechHHHHHHhhcCCc
Q 017726 182 -AIDFR----M-----DEWGID-VALTGSQKALSLPTGMGIVCASPK--AL--EASKTAKSVRVFFDWKDYIKFYNLGTF 246 (367)
Q Consensus 182 -~~~~~----~-----~~~~~d-~~~~s~~K~~~g~~g~g~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
+..++ + ...|+| +++-|.||++++....+++-++.. .+ +++. ..+..-
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~---------------~~l~~~-- 418 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFN---------------QAYMMH-- 418 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHH---------------HHHHHH--
Confidence 11111 1 125788 999999999988777777776443 11 1111 111111
Q ss_pred cCCCCcHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHc
Q 017726 247 WPYTPSIQLLYGLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
...+|+...++++..|...+.. .| ++..++..+.+..+++.+++.
T Consensus 419 qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 419 ATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred cCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhc
Confidence 1336899999999999998886 55 556777778888888888765
No 287
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=2.6e-17 Score=150.73 Aligned_cols=297 Identities=15% Similarity=0.112 Sum_probs=181.0
Q ss_pred hHHHHHHHccCCCCC-CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~ 97 (367)
.+++++++.+..... ..+. ....++++.+++.+....+..+++++||++|+..++... ..++++|++.+..|++.
T Consensus 46 ~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~ 123 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHSPN--LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGR 123 (375)
T ss_pred CHHHHHHHHHHHHhcCcccC--ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcc
Confidence 455777777754321 1111 223466777777664443334689999999999888753 24567888888887765
Q ss_pred HHHHHHHHhCCc---------eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHH
Q 017726 98 LWIDQQQRLNFN---------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (367)
Q Consensus 98 ~~~~~~~~~g~~---------~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~ 164 (367)
.+.. +...+.+ +..++.. ...|++++++++. +++++|++++++|++|.+.+ ++++.++|+
T Consensus 124 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~ 196 (375)
T PRK04260 124 TFGS-MSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQ 196 (375)
T ss_pred cHHH-HhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHH
Confidence 3221 1111111 1111110 0137899998886 35689999999999998875 799999999
Q ss_pred hcCCCcEEEEeeeeccCcee---ec--cccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 165 EYRHPALFLVDGVSSICAID---FR--MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~---~~--~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+ +|+++++|++|...... .. ......|++ +++|.+++...+|++++++++.+.+.....
T Consensus 197 ~--~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~------------ 260 (375)
T PRK04260 197 E--TGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSH------------ 260 (375)
T ss_pred H--cCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCC------------
Confidence 9 99999999998532211 11 112345655 678999644447999999998776643211
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCC
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
.+ .++.+...+.+..++++.+...+ ..++..++.+++++.|++. ....+..-. ..+.++++.+. .
T Consensus 261 ---~~---t~~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~--~ 327 (375)
T PRK04260 261 ---GS---TFGGNKLSMAAASATLDIMLTAG---FLEQALENGNYLQEQLQKALQDKETVTTVR--GLGYMIGIETT--A 327 (375)
T ss_pred ---CC---CCCcCHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--ccceEEEEEec--C
Confidence 01 23445555666666777665443 3334444455555555443 111111100 14556777762 3
Q ss_pred CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 318 NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 318 ~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+..++.+.+.++ ||.+.+. ....+|+++....+++|+.
T Consensus 328 ~~~~~~~~l~~~-Gi~v~~~----~~~~lR~~~~~~~t~~~i~ 365 (375)
T PRK04260 328 DLSQLVEAARDK-GLIVLTA----GTNVIRLLPPLTLTKEEIE 365 (375)
T ss_pred cHHHHHHHHHhC-CCEEecC----CCCEEEEcCCCccCHHHHH
Confidence 567899998754 9998754 2367999987777755444
No 288
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.80 E-value=4.8e-17 Score=149.78 Aligned_cols=274 Identities=14% Similarity=0.085 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEEEEeCCcchHHHHHHHHHhCC-----
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQRLNF----- 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~----- 108 (367)
+...++.++|+++.+. +.+.+++||++|+..++.... ...++|+..+.+|++.... .....+.
T Consensus 77 ~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~-~~~~~~~~~~~~ 152 (397)
T TIGR03246 77 EPVLRLAKKLVDATFA---DKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLF-TVSVGGQPKYSQ 152 (397)
T ss_pred HHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHH-HHHhcCCccccc
Confidence 4567889999988754 258999999999999887531 1345688888778775421 1222221
Q ss_pred -------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-c---HHHHHHHHHhcCCCcEEEEeee
Q 017726 109 -------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-N---LSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 109 -------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~---~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
.+..++. .|++++++++. +++++|+++.++++.|.+. | +++|+++|++ +|+++|+|++
T Consensus 153 ~~~~~~~~~~~~~~-----~d~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~--~g~llI~DEv 221 (397)
T TIGR03246 153 GFAPLPGGIKHAPY-----NDLAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDR--HNALLIFDEV 221 (397)
T ss_pred CCCCCCCceEEeCC-----CCHHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEech
Confidence 1222222 27899999987 4678999998777778664 2 8899999999 9999999999
Q ss_pred eccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCc
Q 017726 178 SSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (367)
Q Consensus 178 ~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (367)
+...... .......+|++ +.+|.++|...+|++++++++++.+..... .. .+..+
T Consensus 222 ~tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~~i~~~~~~~~~---------------~~---t~~~~ 281 (397)
T TIGR03246 222 QTGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTTEIAAHLKVGTH---------------GT---TYGGN 281 (397)
T ss_pred hhcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcHHHHHhccCCCc---------------CC---CCCCC
Confidence 8432111 11112246766 558988654447999999998776642210 11 22345
Q ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCCceEEEEcCCC--CCHHHHHHHHHh
Q 017726 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSH--INSSEIVRRAWQ 328 (367)
Q Consensus 253 ~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~ 328 (367)
...+++..++++.+.+. ++.++.+++.+++.+.|++++ +.+...-. ..+.++.+.+.+. .....+++.|.+
T Consensus 282 p~~~aaa~a~l~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vr--g~G~~~~i~~~~~~~~~~~~~~~~l~~ 356 (397)
T TIGR03246 282 PLACAVAGKVLDLVNTP---ELLAGVKQRHDLFVDGLEKINARYNVFSEIR--GKGLLIGAVLTEAYQGKAKQFVNAAAE 356 (397)
T ss_pred HHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhcCCCeEeee--cCceEEEEEEcCchhhHHHHHHHHHHH
Confidence 55566667777776543 456788889999999998863 33322111 1233444544221 235678888876
Q ss_pred hCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 329 RYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 329 ~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+ ||.+.+. ..+++|+++....+++++.
T Consensus 357 ~-Gv~~~~~----g~~~lR~~p~~~~t~~~i~ 383 (397)
T TIGR03246 357 E-GVIALIA----GPNVVRFAPSLVISDDDID 383 (397)
T ss_pred C-CeEEeec----CCCEEEEeCCCCCCHHHHH
Confidence 5 9988652 1368999876666655443
No 289
>PLN02624 ornithine-delta-aminotransferase
Probab=99.80 E-value=4.3e-17 Score=152.65 Aligned_cols=298 Identities=18% Similarity=0.162 Sum_probs=186.8
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC---------CCC-eE
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS---------PGD-RI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~---------~gd-~v 87 (367)
.+.+.+++.+.... +.+ ....+...++.+.++++++.+ .+.+++||++|+..++..... +++ .|
T Consensus 93 ~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~~---~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~i 169 (474)
T PLN02624 93 HPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGYD---MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAII 169 (474)
T ss_pred CHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCCC---eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEE
Confidence 66677777664432 111 123456678889999988642 589999999999998863211 133 46
Q ss_pred EEEeCCcchHHHHHHHHHhC------------CceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 88 ISFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
+.....|++.....+.. .+ ..+..++. -|++.+++.++... +++++|++..++|++|.+.|
T Consensus 170 i~~~~~yHG~t~~~~s~-~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~-~~iaaiiiEpv~~~~G~v~p 242 (474)
T PLN02624 170 VSCCGCFHGRTLAAISM-SCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDG-DRIAAFLFEPIQGEAGVVIP 242 (474)
T ss_pred EEECCCcCCCCHHHhhc-CCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCC-CCEEEEEECCccCCCCCcCC
Confidence 66666666642211111 11 01222322 16899999887544 57899999999999999987
Q ss_pred ----HHHHHHHHHhcCCCcEEEEeeeeccCc-----eeeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccC
Q 017726 156 ----LSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ----~~~i~~~~~~~~~~~~vi~D~~~~~~~-----~~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~ 225 (367)
+++|.++|++ ||+++|+|++|.... ...+......|+++. +|.++++ ..+|.++.++++++.+...
T Consensus 243 ~~~~L~~l~~lc~~--~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~~~~i~~~~~~~ 318 (474)
T PLN02624 243 PDGYLKAVRELCSK--HNVLMIADEIQTGLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLADKDVMLCIKPG 318 (474)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeeecHHHHhHhccC
Confidence 8999999999 999999999987321 112223345677776 5888654 3478899988877665432
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC--Cc-cccCCCc
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LK-NCTQKEE 302 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~ 302 (367)
. .+. .+..+...+++..++++.+.+++ +.++..++.+++++.|+++. ++ .+..-.
T Consensus 319 ~----------------~~~--T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vr- 376 (474)
T PLN02624 319 E----------------HGS--TFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVR- 376 (474)
T ss_pred C----------------cCC--CCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEE-
Confidence 1 111 22356666777777888776654 34466677778887777752 22 111100
Q ss_pred cCCCceEEEEcCCC----CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 303 WFSDTVTAVIVPSH----INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 303 ~~~~~~~~~~~~~~----~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..+.++.+.+.+. ....++++.|.+ .||.+.++ .+..+||++....+++++.
T Consensus 377 -g~G~~~~i~l~~~~~~~~~a~~~~~~L~e-~GV~v~p~----~~~~lR~~p~l~~t~e~id 432 (474)
T PLN02624 377 -GRGLLNAVVLNSPKLGPVSAYDVCLKLKE-RGLLAKPT----HDTIIRLAPPLSISEDELQ 432 (474)
T ss_pred -eeEEEEEEEecCCCcChHHHHHHHHHHHh-CCeEEecC----CCCEEEEECCccCCHHHHH
Confidence 1223444444221 124578888865 59999765 2467999976666655443
No 290
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.80 E-value=3.8e-18 Score=146.25 Aligned_cols=277 Identities=16% Similarity=0.116 Sum_probs=169.8
Q ss_pred HHHHHHHccCCCC------CCCCcHH-HHHHHHHHHHHHHhcCCCCceEEe--cCChhHHHHHHHHccCCCCCeEEEEeC
Q 017726 22 DQVIRAMNRNNED------YRSPAVP-ALTKTLLEDIKKIFKTTSGTPFLI--PTTGTGAWESALTNTLSPGDRIISFLI 92 (367)
Q Consensus 22 ~~v~~a~~~~~~~------~~~~~~~-~~~~~~~~~la~~~~~~~~~~v~~--~~ggt~al~~~~~~~~~~gd~vl~~~~ 92 (367)
..|++|+++.-.. ..+|++. ...+.+.+-.|+.+|.+++ ++= --|||+|+..++.+++.|||+++....
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfgaE~A--LVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG 104 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFGAEDA--LVRPQFVSGTHAIALALFGVLRPGDELLSITG 104 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT-SEE--EEETTS-SHHHHHHHHHHHH--TT-EEEESSS
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhCchhh--hhcccccchHHHHHHHHHhcCCCCCeEEEcCC
Confidence 4688888885322 2245543 4577888889999998853 221 136899999999999999999987544
Q ss_pred C-cchHH-HH-------HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccc-------cccH
Q 017726 93 G-QFSLL-WI-------DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGV-------TNNL 156 (367)
Q Consensus 93 ~-~~~~~-~~-------~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~-------~~~~ 156 (367)
. |-... .. .-++..|+++..|++.+++.+|.|.++++++ +++|+|++.- +.|. +.++
T Consensus 105 ~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~----~~tk~v~IQR---SrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 105 KPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKALK----PNTKMVLIQR---SRGYSWRPSLTIEEI 177 (403)
T ss_dssp S--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH----TTEEEEEEE----S-TTSSS----HHHH
T ss_pred CchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHhhc----cCceEEEEec---CCCCCCCCCCCHHHH
Confidence 2 22221 10 0124468999999999999999999999999 4779998863 2443 3357
Q ss_pred HHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCC--CcceeeeeCHHHHHHhccCCC-Cceeec
Q 017726 157 SKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLP--TGMGIVCASPKALEASKTAKS-VRVFFD 233 (367)
Q Consensus 157 ~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~--~g~g~~~~~~~~~~~~~~~~~-~~~~~~ 233 (367)
+++.+++|+.+++++++||.||+-+.......+.|+|++.+|+-|..+|. +..||++++++++++...... ++..
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG-- 255 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIG-- 255 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTG--
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccc--
Confidence 77778888877899999999999888777777789999999999998763 224999999999998764432 1111
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEc
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 313 (367)
-+.|. |.... -.+...+-+ -.++.....+-+......++++|+++.+...+.++..+..+.+
T Consensus 256 -------~e~G~----t~~~~--R~~~QGlFl-----AP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l 317 (403)
T PF06838_consen 256 -------KEVGA----TLGTN--RLMFQGLFL-----APHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIEL 317 (403)
T ss_dssp -------GGSS------TTTH--HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-
T ss_pred -------ccccc----CcchH--HHHHhHHhh-----chHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEEC
Confidence 12222 11110 111222222 1344555566677777778889999988776778888889988
Q ss_pred CCCCCHHHHHHHHH
Q 017726 314 PSHINSSEIVRRAW 327 (367)
Q Consensus 314 ~~~~~~~~l~~~L~ 327 (367)
.+...-..||+.+.
T Consensus 318 ~~~e~l~~FC~~iQ 331 (403)
T PF06838_consen 318 GSPEKLIAFCQGIQ 331 (403)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 42222335666664
No 291
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=4.9e-17 Score=142.53 Aligned_cols=314 Identities=18% Similarity=0.170 Sum_probs=209.5
Q ss_pred CCCCCcccccC-CC-----CCChHHHHHHHccCCCC--CCCCc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHH
Q 017726 5 YAPGKNHLFVP-GP-----VHIPDQVIRAMNRNNED--YRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWES 75 (367)
Q Consensus 5 ~~~~~~~~~~~-~p-----~~~~~~v~~a~~~~~~~--~~~~~-~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~ 75 (367)
+..++.|++.- |- ..-++.+.++++++... |.+.. ..+...++.+.|.+..+ . .+.|.|+|||+||++.
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~-~d~vff~NSGaEA~Ea 115 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-F-ADRVFFCNSGAEANEA 115 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-c-ccEEEEcCCcHHHHHH
Confidence 44555555533 32 24478888888886543 22322 23556678788887776 2 4569999999999999
Q ss_pred HHHcc---CC-C-CCeEEEEeCCcchHHHHHHHHH------hCC-----ceEEEeCCCCCCCCHHHHHHHHhccCCCCcc
Q 017726 76 ALTNT---LS-P-GDRIISFLIGQFSLLWIDQQQR------LNF-----NVDVVESDWGEGAKLDVLASKLAADTAHTIK 139 (367)
Q Consensus 76 ~~~~~---~~-~-gd~vl~~~~~~~~~~~~~~~~~------~g~-----~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~ 139 (367)
++... .. + ..+|+....++++-.+..++.. .++ .+..+|.+ |++++++++++ .|.
T Consensus 116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~----~ta 186 (404)
T COG4992 116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDE----DTA 186 (404)
T ss_pred HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhcc----CeE
Confidence 98642 21 2 3478877777766322111110 111 12333333 89999999995 569
Q ss_pred EEEEEecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcce
Q 017726 140 AICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMG 210 (367)
Q Consensus 140 lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g 210 (367)
+|++...+--.|.+.+ +++++++|++ ||+++|.||.|...... ........||++. .|.++|...+|
T Consensus 187 AvivEPIQGEgGV~~~~~~fl~~lr~lCd~--~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tl--aK~LgGG~Pig 262 (404)
T COG4992 187 AVIVEPIQGEGGVIPAPPEFLKALRELCDE--HGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTL--AKALGGGFPIG 262 (404)
T ss_pred EEEEecccCCCCCCCCCHHHHHHHHHHHHH--hCeEEEEeccccCCCccchHHHHHHhCCCCCEEEe--eccccCCccce
Confidence 9999999999998876 7789999999 99999999999754432 2333345687766 69998877789
Q ss_pred eeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Q 017726 211 IVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVE 290 (367)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~ 290 (367)
.++.++...+.+.+..+ |+ .+.-|.+++++..++++.+.+++ ..++.++..++|.+.|+
T Consensus 263 A~la~~~~~~~~~~G~H----------------gS--TfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~ 321 (404)
T COG4992 263 AMLATEEIASAFTPGDH----------------GS--TFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLR 321 (404)
T ss_pred eeEEchhhhhcCCCCcc----------------cC--CCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHH
Confidence 99988555554444322 22 44577878888888899888875 44467788889999998
Q ss_pred Hc--CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHH
Q 017726 291 AW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNF 361 (367)
Q Consensus 291 ~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~ 361 (367)
++ .+.++..-. -.+.++-+.+.....+.++++.+.++ |+.+... .++.+|+.+-..++++++..
T Consensus 322 ~l~~~~~~v~~vR--G~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a----~~~ViR~~PpL~i~~eei~~ 387 (404)
T COG4992 322 ELKRRYPLVKEVR--GRGLMIGIELKEPYRARDIVRALREE-GVLVLPA----GPNVIRFLPPLVITEEEIDE 387 (404)
T ss_pred HHhhcCCceeeee--cceeEEEEEecCcccHHHHHHHHHHC-CeEEecC----CCCeEEecCCccCCHHHHHH
Confidence 86 344333211 23446666663333478999999765 9887642 23589999877777665543
No 292
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.79 E-value=3.3e-17 Score=152.47 Aligned_cols=309 Identities=15% Similarity=0.087 Sum_probs=184.9
Q ss_pred ChHHHHHHHccCCCCCC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcch
Q 017726 20 IPDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFS 96 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~ 96 (367)
.++.+.+++.++..... .........+++++|++++... +.+++++||++|+..+++.. ...+++|++..++|++
T Consensus 65 ~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~~--~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG 142 (423)
T TIGR00713 65 AHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPSV--EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHG 142 (423)
T ss_pred CCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCcc--cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCC
Confidence 35666766666543211 1223356678999999987643 36999999999999988742 2356899999998888
Q ss_pred HHHHHHHH-HhCCc-----------------eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---
Q 017726 97 LLWIDQQQ-RLNFN-----------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (367)
Q Consensus 97 ~~~~~~~~-~~g~~-----------------~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~--- 155 (367)
......+. ..+.. ...++. .|++++++++++.. +++++|++....+.+|.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~-~~~aavi~ep~~~~~G~~~~~~~ 216 (423)
T TIGR00713 143 HHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEYG-EEIAGVIVEPVAGNMGVVPPKPE 216 (423)
T ss_pred ChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHcC-CcEEEEEEeCCCCCCCCcCCCHH
Confidence 53111110 01100 111111 27899999997543 46788888644444898876
Q ss_pred -HHHHHHHHHhcCCCcEEEEeeeeccCce--e--eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCce
Q 017726 156 -LSKVRKLLDEYRHPALFLVDGVSSICAI--D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (367)
Q Consensus 156 -~~~i~~~~~~~~~~~~vi~D~~~~~~~~--~--~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 230 (367)
+++|.++|++ +|+++|+|++|..... . ........|++ +++|.+++...+|++++++++++.+.... ..
T Consensus 217 ~l~~l~~l~~~--~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~--~~ 290 (423)
T TIGR00713 217 FLAGLRALTEE--YGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAFGGRREIMERLAPEG--PV 290 (423)
T ss_pred HHHHHHHHHHH--hCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhhcCCCceeeeeEHHHHHHhhCcCC--Ce
Confidence 6889999999 9999999999864321 1 11112235654 57899975444799999999988775311 00
Q ss_pred eechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceE
Q 017726 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (367)
.. ++ .+..+...+++..++++.+.+.+ ++...+....+.+.+.+.+++.++...... .+ .++
T Consensus 291 ~~-----------~~--T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~---~g-~~~ 353 (423)
T TIGR00713 291 YQ-----------AG--TLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR---VG-SMF 353 (423)
T ss_pred ee-----------cc--CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEe---ec-cEE
Confidence 00 11 33466666677777888877654 445555555566666666666654432211 12 234
Q ss_pred EEEcC-CC---------CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 310 AVIVP-SH---------IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 310 ~~~~~-~~---------~~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
.+.+. +. .+ ...+++.|.+ +||.+.++. .+.+|+++....++.+...++|
T Consensus 354 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~----~~~~~l~~~~t~~~i~~~~~~l 416 (423)
T TIGR00713 354 SLFFTEEEVTNYADAKKSDTELFAKFFHEMLD-KGVFLPPSQ----FEACFLSAAHTEEDIENTIEAA 416 (423)
T ss_pred EEEEecCCCCChhhhhcccHHHHHHHHHHHHH-CCeEEecCC----ccceeeECCCCHHHHHHHHHHH
Confidence 33331 11 11 1257778875 599986531 1347887653333334333333
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.79 E-value=9e-17 Score=148.40 Aligned_cols=277 Identities=14% Similarity=0.063 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEEEEeCCcchHHHHHHHHHhCCceEE-
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQRLNFNVDV- 112 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~- 112 (367)
+...++.++++++.+. +.+.+++||++|+..++.... .++.+|+....+|++... ......+.+...
T Consensus 81 ~~~~~la~~l~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~-~~~~~~~~~~~~~ 156 (406)
T PRK12381 81 EPVLRLAKKLIDATFA---DRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTL-FTVSAGGQPKYSQ 156 (406)
T ss_pred HHHHHHHHHHHhhCCC---CeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcch-hHHhhcCCccccc
Confidence 4456888888888753 359999999999999887531 245678888888888643 112222211000
Q ss_pred --EeCCC----CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-----cHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 113 --VESDW----GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-----NLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 113 --v~~~~----~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-----~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
.+..+ ....|++++++.++ +++++|++. |.+++|-+. .+++|+++|++ ||+++|+|++|...
T Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~----~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~--~~~llI~DEv~tG~ 229 (406)
T PRK12381 157 DFAPLPPDIRHAAYNDLNSASALID----DQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDR--HNALLIFDEVQTGV 229 (406)
T ss_pred CCCCCCCCeeEeCCCCHHHHHHhcc----CCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEcchhhCC
Confidence 01000 01137899999886 356788775 677777543 37889999999 99999999998532
Q ss_pred cee---e--ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHH
Q 017726 182 AID---F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (367)
Q Consensus 182 ~~~---~--~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (367)
... + .......|+ .+++|.+++...+|++++++++++.+..... +. .+..+...+
T Consensus 230 gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~----------------~~--t~~~~pl~~ 289 (406)
T PRK12381 230 GRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTEKCASVMTVGTH----------------GT--TYGGNPLAS 289 (406)
T ss_pred CCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcHHHHhhcCCCCC----------------CC--CCCCCHHHH
Confidence 211 1 111223565 4668999655557999999998877653211 11 234566666
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC--CccccCCCccCCCceEEEEcCCCC--CHHHHHHHHHhhCCe
Q 017726 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCTQKEEWFSDTVTAVIVPSHI--NSSEIVRRAWQRYNL 332 (367)
Q Consensus 257 ~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~L~~~~gv 332 (367)
++..++++.+.+. +++++.+++.+++.+.|++++ +.+...-. -.+.++.+.+++.. ....+.+.|.+ +||
T Consensus 290 aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vr--g~Gl~~~~~l~~~~~~~~~~~~~~l~~-~Gv 363 (406)
T PRK12381 290 AVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFSEIR--GLGLLIGCVLNAEYAGKAKQISQEAAK-AGV 363 (406)
T ss_pred HHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEe--cCeEEEEEEecCchhhHHHHHHHHHHH-CCc
Confidence 7777778777544 456788889999999998863 33222110 13445666664322 34677787865 499
Q ss_pred EEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 333 SLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 333 ~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
.+.+. ..+.+|+++....+++++
T Consensus 364 ~v~~~----g~~~lRl~p~~~~t~~~i 386 (406)
T PRK12381 364 MVLIA----GPNVVRFAPALNISEEEI 386 (406)
T ss_pred EEeeC----CCCEEEEeCCccCCHHHH
Confidence 98643 235899987665665543
No 294
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.1e-16 Score=148.58 Aligned_cols=288 Identities=17% Similarity=0.140 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEEEEeCCcchHHHHHHHHHhC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQRLN------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (367)
+...++.+.|.+.+... .+.+.|++||++|++.++.... ....+|+....+|++....... ..+
T Consensus 85 ~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls-~~~~~~~~~ 162 (423)
T PRK05964 85 EPAERLAQRLVALTPGG-LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMS-VGDRGGMHA 162 (423)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHh-cCCCccccc
Confidence 44567778888776422 2359999999999999886421 1235788888888885421111 111
Q ss_pred ------CceEEEeCCCCC--CCCHHHHHHHHhccCCCCccEEEEEe-cCCCcccccc----HHHHHHHHHhcCCCcEEEE
Q 017726 108 ------FNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVH-NETATGVTNN----LSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 108 ------~~~~~v~~~~~~--~~d~e~l~~~i~~~~~~~~~lv~~~~-~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~ 174 (367)
..+..++.+... ..+++.+++.+.++. +++.+|++.. .++..|...+ +++|.++|++ ||+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~-~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~--~g~llI~ 239 (423)
T PRK05964 163 LYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA-GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR--HGVLLIF 239 (423)
T ss_pred cccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC-CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH--cCCEEEE
Confidence 112333333211 112788888887544 4677888776 5777887764 8899999999 9999999
Q ss_pred eeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCC-CCceeechHHHHHHhhcCCcc
Q 017726 175 DGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAK-SVRVFFDWKDYIKFYNLGTFW 247 (367)
Q Consensus 175 D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 247 (367)
|+++..... ........+|+++. +|+++|+ ..+|+++.++++.+.+.... .... + .++
T Consensus 240 DEv~tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~----------~-~~~-- 304 (423)
T PRK05964 240 DEIATGFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAF----------M-HSP-- 304 (423)
T ss_pred echhhCCCcCcchhHHHhcCCCCCeeee--ehhhhcCcccceEEEEcHHHHHhhhcCCccccc----------c-cCC--
Confidence 999863221 11222234677654 6999765 45789999999988774310 0000 0 011
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCC---CHHHHH
Q 017726 248 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI---NSSEIV 323 (367)
Q Consensus 248 ~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~ 323 (367)
.++.+...+++..++++.+.+++ ..++..++.+++.+.|+++ +++.+..-. ..+.++.+.+.+.. ....+.
T Consensus 305 T~~~np~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~~vr--g~Gl~~~i~l~~~~~~~~~~~l~ 379 (423)
T PRK05964 305 SYTANPLACAAANASLDLFEDEP---VLERVAALSAGLAEGLEPFRDLPGVADVR--VLGAIGAVELDRPVLERDGPALR 379 (423)
T ss_pred CCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhccCCCeEEee--cccEEEEEEeccCcchhHHHHHH
Confidence 23467777788888888887654 4567788888898888876 444332111 23345566663321 255788
Q ss_pred HHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 324 RRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 324 ~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.|.+ +||.+.+. ++.+|+++...++++|++
T Consensus 380 ~~l~~-~Gv~v~~~-----~~~lR~~p~l~~t~edId 410 (423)
T PRK05964 380 AFALE-RGVLLRPL-----GNTIYLMPPYIITAEELD 410 (423)
T ss_pred HHHHH-CCeEEEec-----CCEEEEeCCcccCHHHHH
Confidence 88865 49998752 257999988666655443
No 295
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=3.2e-17 Score=143.14 Aligned_cols=320 Identities=15% Similarity=0.193 Sum_probs=212.3
Q ss_pred ccccCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCe
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDR 86 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~ 86 (367)
.-|.-+..+..+.+.+++..+....- .-+-.....++++..|+++|.++ .++|..| -..+...+.+++.||.-
T Consensus 147 LGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mG-f~TNs~~~p~l~~~gsL 223 (519)
T KOG1357|consen 147 LGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVED--AIVFSMG-FATNSMNIPSLLGKGSL 223 (519)
T ss_pred ccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcc--eEEEecc-ccccccCcceeecCCcc
Confidence 34555677788889999998765311 12335778899999999999988 4566544 44555557778899988
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcc---CCCCc-----cEE-EEEecCCCccccccHH
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAAD---TAHTI-----KAI-CIVHNETATGVTNNLS 157 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~---~~~~~-----~lv-~~~~~~n~tG~~~~~~ 157 (367)
|+.....|.|.+ .-++..|+.++....+ |.++||+++.+. ..++| |++ +.....+.-|.+.++.
T Consensus 224 IiSDelNHaSi~--~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp 296 (519)
T KOG1357|consen 224 IISDELNHASLI--TGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLP 296 (519)
T ss_pred eeeccccchhee--ccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccH
Confidence 887777666654 3478889999988876 788888888872 11222 344 4445556889999999
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCceee---------ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCC
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAIDF---------RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~~---------~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~ 228 (367)
++.+++|+ +.++++.|++|+.|++.- .++...+|++.+.+.|.++ ..| |++.+++++++.+......
T Consensus 297 ~vvalkkk--ykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfg-a~G-Gyiagsk~lid~lrt~s~~ 372 (519)
T KOG1357|consen 297 EVVALKKK--YKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFG-AAG-GYIAGSKELIDYLRTPSPS 372 (519)
T ss_pred HHHHhhcc--ccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcc-ccc-ceecCcHHHHhhhccCCCc
Confidence 99999999 999999999999887631 2223357999999999884 555 9999999998877653222
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH-hC---hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE-EG---LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~-~g---~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (367)
..+- + ..++++ +.-...++..+.. .| .++..+++.+|+.+++..|+++|+.++..+++
T Consensus 373 ~~ya------------t--~~sppv--aqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dS-- 434 (519)
T KOG1357|consen 373 ALYA------------T--SLSPPV--AQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDS-- 434 (519)
T ss_pred eeec------------c--cCChHH--HHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCC--
Confidence 1111 1 112222 2223335555542 22 67788999999999999999999999987432
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEc-cCCC--CCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLG-LGLN--KVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~-~g~~--~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
.++.+.+--......+.+.|+++ ++.+. -|+. +.-....|++....+..+ |..++.++
T Consensus 435 --pVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~ 497 (519)
T KOG1357|consen 435 --PVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVID 497 (519)
T ss_pred --CcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHh
Confidence 22322221122345777777655 54443 3443 333456788766655444 44444433
No 296
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=4.9e-16 Score=151.76 Aligned_cols=313 Identities=13% Similarity=0.047 Sum_probs=209.4
Q ss_pred CCChHHHHHHHccCCC--C---CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---CCCCC
Q 017726 18 VHIPDQVIRAMNRNNE--D---YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LSPGD 85 (367)
Q Consensus 18 ~~~~~~v~~a~~~~~~--~---~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~~~gd 85 (367)
..+|+.+.+.+.+... . ... .+..+..-+++++++++.|.+-.+ .-+..++|.+-++++.+. ..+++
T Consensus 76 ~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aN-aSl~d~atA~aEa~~~a~~~~~~~~~ 154 (939)
T TIGR00461 76 TILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVAN-ASLLDEGTAAAEAMALSFNVSKKKAN 154 (939)
T ss_pred CcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhh-hhccchhhHHHHHHHHHHHhhcCCCC
Confidence 4557777755555321 1 122 234455778899999999998543 345577776666555442 22347
Q ss_pred eEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHH
Q 017726 86 RIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLL 163 (367)
Q Consensus 86 ~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~ 163 (367)
+|++++..|+... +...++..|++++.++ ++++++.++ +..+++. ..|..|.+.|+++|.+++
T Consensus 155 ~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~~------~~~v~~q-~Pn~~G~ied~~~i~~~~ 219 (939)
T TIGR00461 155 KFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAVD------VFGCLLQ-YPATDGSILDYKQLIDAL 219 (939)
T ss_pred EEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcCC------EEEEEEE-CCCCCeEEecHHHHHHHH
Confidence 8999988888765 4456788899988874 445555442 3444444 457899999999999999
Q ss_pred HhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCccc----CCCcceeeeeCHHHHHHhccCCCC---------ce
Q 017726 164 DEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALS----LPTGMGIVCASPKALEASKTAKSV---------RV 230 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~----g~~g~g~~~~~~~~~~~~~~~~~~---------~~ 230 (367)
|+ +|++++++..........++.++|+||++++.+++.. |.++.|++++++++++++.....+ .+
T Consensus 220 h~--~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~ 297 (939)
T TIGR00461 220 HS--HKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTAL 297 (939)
T ss_pred HH--cCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccc
Confidence 99 9999999776666666667778899999888776543 234479999999999888765542 01
Q ss_pred eechH--HHHHHhhcCCccCCCCcHHHHHHHHHH--HHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCC
Q 017726 231 FFDWK--DYIKFYNLGTFWPYTPSIQLLYGLRAA--LDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSD 306 (367)
Q Consensus 231 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~a--l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 306 (367)
.+.++ ++..+.+..+ ++......+.++.++ +.++..+|++++.++...++.++.+.|++.|+++..+ .++.
T Consensus 298 ~l~LqtReqhIrRekAt--SNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~- 372 (939)
T TIGR00461 298 RLALQTREQHIRRDKAT--SNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFD- 372 (939)
T ss_pred eeecccccccccccccC--cchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cccc-
Confidence 11111 1223444443 222233333444445 4456778899999999999999999999999888765 2222
Q ss_pred ceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 307 TVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
-+.+++ ...+.+++.+.+.++ ||.++.. .++.+++|+.-..+.+|+.
T Consensus 373 -~~~v~~-~~~~~~~i~~~~~~~-gi~l~~~----~~~~i~~s~~E~~t~~di~ 419 (939)
T TIGR00461 373 -TLTVKV-GNGISSELLKAAEEF-NINLRAV----DTTTVGIALDETTTKADVE 419 (939)
T ss_pred -eEEEEe-CCCCHHHHHHHHHHC-CCeeeec----CCCEEEEEeecCCCHHHHH
Confidence 244555 234678899999765 9987652 2357999987777766544
No 297
>PLN00144 acetylornithine transaminase
Probab=99.77 E-value=6.2e-16 Score=141.31 Aligned_cols=293 Identities=16% Similarity=0.103 Sum_probs=181.5
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---CC------C-----
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LS------P----- 83 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~~------~----- 83 (367)
++++.+++.++... +.. ........++.+.+.+..+ .+.+.|++||++|++.++... .. +
T Consensus 33 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~ 109 (382)
T PLN00144 33 DPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF---ADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAAS 109 (382)
T ss_pred CHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC---CCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCcccccc
Confidence 44555555554321 111 1113445567777776653 236999999999999988632 11 1
Q ss_pred -CCeEEEEeCCcchHHHHHHHHHhCCc------------eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc
Q 017726 84 -GDRIISFLIGQFSLLWIDQQQRLNFN------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT 150 (367)
Q Consensus 84 -gd~vl~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t 150 (367)
..+|+....+|++....... ..+-. +..++. .|++.+++.+.. .++++|++...+||.
T Consensus 110 ~r~~ii~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~---~~~aavi~eP~q~~g 180 (382)
T PLN00144 110 SATEFVSFSNSFHGRTLGALA-LTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQK---GKTAAVFVEPVQGEG 180 (382)
T ss_pred ccceEEEECCCcccccHHHHh-cCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcCC---CCeEEEEEccccCCC
Confidence 25788888888886422111 11110 122222 268999988853 467899888888996
Q ss_pred ccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee---e--ccccccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 151 GVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID---F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 151 G~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---~--~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
|...+ +++++++|++ ||+++|+|++++..... + +......| +.+.+|.+++...+|++++++++.+.
T Consensus 181 g~~~~~~~~~~~l~~l~~~--~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~pig~v~~~~~~~~~ 256 (382)
T PLN00144 181 GIYPATKEFLQGLRALCDE--AGALLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLPIGAVLVTEKVASA 256 (382)
T ss_pred CCccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCccchHhhhhhcCCCCC--EEEecccccCCcceEEEEEcHHHHhc
Confidence 65542 7889999999 99999999998743221 1 12233467 45558999766668999999998877
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccC
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQ 299 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 299 (367)
+..... .. .+..+...+++..++++++.+.++ .++..+..+++++.|++. ..+....
T Consensus 257 ~~~~~~---------------~~---T~~~~pl~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~~~~~~~~~~~ 315 (382)
T PLN00144 257 INPGDH---------------GS---TFAGGPLVCNAALAVLDKISKPGF---LASVAKKGEYLRELLRRKLGGNPHVKE 315 (382)
T ss_pred cCCCCC---------------CC---CCCCCHHHHHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 753211 11 334666666777778888876543 345555666666666553 2322221
Q ss_pred CCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHH
Q 017726 300 KEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~ 358 (367)
-. ..+.++++.+ + .+...+.+.+.+ .||.+.++.. ++.+|+++....++++
T Consensus 316 vr--g~G~~~~l~l-~-~~~~~~~~~~~~-~Gv~i~~~~~---~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 316 VR--GVGLLVGIQL-D-VPAGPLVDACRD-SGLLVLTAGK---GDVVRLVPPLVISEAE 366 (382)
T ss_pred ee--cCceEEEEEe-c-CccHHHHHHHHH-CCeEEeecCC---CCEEEEeCCCccCHHH
Confidence 11 2556777777 2 345788888865 4999987621 4789999766565544
No 298
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.76 E-value=7.1e-16 Score=147.07 Aligned_cols=242 Identities=12% Similarity=0.062 Sum_probs=171.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC--
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (367)
.....+.++..|+.+|++. ...++||+|.++.+++.+.+.+||.||+..+.|=|.. ..++...|+.++++....+
T Consensus 173 eG~i~eAq~~AA~~fgAd~--tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADK--TYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HGALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCc--eEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HHHHHHcCCeEEEeecccccc
Confidence 3557799999999999987 3588899999999999999999999999999877743 2246778999998865431
Q ss_pred ---CCCCH-----HHHHHHHhccCCC-----C-ccEEEEEecCCCccccccHHHHHHH-HHhcCCCcEEEEeeeeccCce
Q 017726 119 ---EGAKL-----DVLASKLAADTAH-----T-IKAICIVHNETATGVTNNLSKVRKL-LDEYRHPALFLVDGVSSICAI 183 (367)
Q Consensus 119 ---~~~d~-----e~l~~~i~~~~~~-----~-~~lv~~~~~~n~tG~~~~~~~i~~~-~~~~~~~~~vi~D~~~~~~~~ 183 (367)
+.++. +.++++|++++.. + .+++++++| |..|.+++++.|.+. ++. ++ +|++|+||+.-..
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~--~~-~llvDEAhgah~~ 325 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHL--CD-YILFDSAWVGYEQ 325 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhcc--CC-cEEEeCcchhhhc
Confidence 23454 4599999876211 2 478888876 789999999999998 677 77 9999999864221
Q ss_pred e------e--ccccccce----EEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCC
Q 017726 184 D------F--RMDEWGID----VALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (367)
Q Consensus 184 ~------~--~~~~~~~d----~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (367)
. + ...+.|+| +++-|.||.+++....+++-++.+.++. ...+.+...+...+..- ...+|
T Consensus 326 F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g------~~~~v~~~r~~~al~m~--qSTSP 397 (720)
T PRK13578 326 FIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKG------QARYCPHKRLNNAFMLH--ASTSP 397 (720)
T ss_pred cCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCccccc------ccccCCHHHHHHHHHHH--cCCCh
Confidence 1 1 11245788 9999999999887777777776554220 00112222222222211 13368
Q ss_pred cHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH-HHc-CCccc
Q 017726 252 SIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAV-EAW-GLKNC 297 (367)
Q Consensus 252 ~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L-~~~-g~~~~ 297 (367)
+...++++..+.+.+....-++..++..+++..+++.| +.. ++.+.
T Consensus 398 sY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~ 445 (720)
T PRK13578 398 FYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF 445 (720)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 88888899988888876323667778888888888888 544 66655
No 299
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=1.9e-15 Score=140.71 Aligned_cols=309 Identities=17% Similarity=0.108 Sum_probs=185.2
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
++++.+++.+.... ..+....+...++.++|++++.-. .+.+.|++||++|+..++... .....+|+....+|
T Consensus 61 ~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~y 139 (433)
T PRK08117 61 HPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGG-LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCF 139 (433)
T ss_pred CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCC-CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCc
Confidence 45566666554322 111123355678888888887322 236899999999999988742 22345788888878
Q ss_pred chHHHHHHHHHh-------C-----CceEEEeCCCCCC------------CCHHHHHHHHhcc-CCCCccEEEEEecCCC
Q 017726 95 FSLLWIDQQQRL-------N-----FNVDVVESDWGEG------------AKLDVLASKLAAD-TAHTIKAICIVHNETA 149 (367)
Q Consensus 95 ~~~~~~~~~~~~-------g-----~~~~~v~~~~~~~------------~d~e~l~~~i~~~-~~~~~~lv~~~~~~n~ 149 (367)
++.....+.... + ..+..+|.+.... .+++++++.++.. ...++.+|++......
T Consensus 140 HG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~ 219 (433)
T PRK08117 140 HGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGE 219 (433)
T ss_pred CCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCC
Confidence 775322111100 0 0123343332111 1456677776531 1146788899988888
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee---ecccc--ccceEEEecCCCcccCCCcceeeeeCHHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID---FRMDE--WGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---~~~~~--~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~ 220 (367)
.|.+.| +++++++|++ ||+++|+|++|+..... +.... ...|+ .+++|.+++...+|++++++++.+
T Consensus 220 ~G~~~~~~~~l~~l~~lc~~--~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pigav~~~~~i~~ 295 (433)
T PRK08117 220 GGYIVPPKSFLKKLREICDR--HGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPLSAVVASKELME 295 (433)
T ss_pred CCCccCCHHHHHHHHHHHHH--cCCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhccCCCcceeEEEcHHHHh
Confidence 899988 9999999999 99999999998743221 11111 22455 577899975444799999999877
Q ss_pred HhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC--Ccccc
Q 017726 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG--LKNCT 298 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g--~~~~~ 298 (367)
.+..... .+ .++.+...+++..++++.+++.+ ..++..++.+++++.|+++. +.+..
T Consensus 296 ~~~~~~~---------------~~---T~~~np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~ 354 (433)
T PRK08117 296 QWPLGSH---------------GT---TFGGNPVACAAALATLEVIKEEK---LLDNANEMGAYALERLEVLKEKHPVIG 354 (433)
T ss_pred hccCCCC---------------CC---CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence 6642110 11 23456666777788888776553 45567777888888887752 33222
Q ss_pred CCCccCCCceEEEEcCCC------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSH------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.-. ..+.++.+.+.+. .....+.+.+.+ +||.+.+.. ..+..+|+++....+++++.
T Consensus 355 ~vr--g~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g--~~~~~lRl~p~~~~t~~~i~ 417 (433)
T PRK08117 355 DVR--GIGLMIGIEIVDPDGEPDGDAVEKILDKCLE-KGLLFYLCG--NAGNVLRMIPPLTVTKEEID 417 (433)
T ss_pred eee--cCCcEEEEEEecCCCCcchHHHHHHHHHHHH-CCCEEeecC--CCCCEEEEeCCccCCHHHHH
Confidence 101 1223444444211 123456677765 599886521 12468999975555554443
No 300
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.74 E-value=4.7e-15 Score=137.41 Aligned_cols=307 Identities=16% Similarity=0.110 Sum_probs=179.7
Q ss_pred hHHHHHHHccCCCC--CCC--CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED--YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~--~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
.+++.+++.++... +.. ....+...++.++|.++......+.+.|++||++|++.++... .....+|+....+|
T Consensus 51 ~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~y 130 (420)
T TIGR00700 51 HPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGF 130 (420)
T ss_pred CHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCc
Confidence 45566666654332 111 1222445567777777764222246999999999999988632 23345788888888
Q ss_pred chHHHHHHHH-------HhCC-----ceEEEeCCCCCC-------C----CHHHHHHHHh--ccCCCCccEEEEEecCCC
Q 017726 95 FSLLWIDQQQ-------RLNF-----NVDVVESDWGEG-------A----KLDVLASKLA--ADTAHTIKAICIVHNETA 149 (367)
Q Consensus 95 ~~~~~~~~~~-------~~g~-----~~~~v~~~~~~~-------~----d~e~l~~~i~--~~~~~~~~lv~~~~~~n~ 149 (367)
++.....+.. ..+. .+..++.+...+ . +++.+++.+. ... +++.+|++......
T Consensus 131 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iAavi~Epi~g~ 209 (420)
T TIGR00700 131 HGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGA-NNVAALVIEPVQGE 209 (420)
T ss_pred CCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCC-CcEEEEEECCccCC
Confidence 8864211110 0111 123333321111 0 2456666663 122 56789999988888
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~ 220 (367)
+|.+++ +++|+++|++ ||+++|+|+++...... +.......|+++ .+|.+++...+|++++++++++
T Consensus 210 ~G~~~~~~~~l~~l~~lc~~--~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G~pig~v~~~~~i~~ 285 (420)
T TIGR00700 210 GGFIVPAKGFVPALLDWCRE--HGIVFIADEVQTGFARTGAMFACEHEGPEPDLIT--TAKSLADGLPLSGVTGRAEIMD 285 (420)
T ss_pred CCCccCCHHHHHHHHHHHHH--cCCEEEEEecccCCcccchhHHHhhcCCCCCEEE--eeccccCCcceEEEEecHHHHh
Confidence 898876 8889999999 99999999998643221 111223467665 6899976555799999999887
Q ss_pred HhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-C-Ccccc
Q 017726 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G-LKNCT 298 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g-~~~~~ 298 (367)
.+..... .+ .+..+...+++..++++.+.+.++. ++..+..+++++.|+++ . ++.+.
T Consensus 286 ~~~~~~~---------------~~---T~~~~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~ 344 (420)
T TIGR00700 286 APAPGGL---------------GG---TYAGNPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRIG 344 (420)
T ss_pred hcCCCCc---------------CC---CCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 7653211 11 2345566667777788887776533 34555555666666554 2 22211
Q ss_pred CCCccCCCceEEEEcCCC---CC----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHH
Q 017726 299 QKEEWFSDTVTAVIVPSH---IN----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~---~~----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~ 358 (367)
.-. ..+.++++.+.+. .+ ...+.+.+. ++||.+.++... ++++|+++....++++
T Consensus 345 ~vr--g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~ 406 (420)
T TIGR00700 345 DVR--GLGAMIAVELVDPGTTEPDAGLAERIATAAH-AAGLLLLTCGMF--GNIIRFLPPLTIGDEL 406 (420)
T ss_pred Eee--ccceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeccCCC--CCEEEEECCCCcCHHH
Confidence 100 1244566655211 11 234555554 459999876332 4689999755455443
No 301
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=9.5e-16 Score=127.31 Aligned_cols=287 Identities=13% Similarity=0.140 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHHccC---CCCC--eE-EEEeCCcchHHHHHHHH------HhC
Q 017726 41 PALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTNTL---SPGD--RI-ISFLIGQFSLLWIDQQQ------RLN 107 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~-~~~~v~~~~ggt~al~~~~~~~~---~~gd--~v-l~~~~~~~~~~~~~~~~------~~g 107 (367)
....+.+.+.+.+-+|.. .++++.+|+|+..+...++..+- ..|+ +| +-..|+|.++. .+.- ...
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~--d~~l~~d~fVs~k 154 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYA--DAGLEEDLFVSAK 154 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccc--ccccCccceeecc
Confidence 355666677777777776 55679999999899888776542 3343 33 33445555532 1110 011
Q ss_pred CceEEEeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCce
Q 017726 108 FNVDVVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICAI 183 (367)
Q Consensus 108 ~~~~~v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~ 183 (367)
-++..++.. -..++|.+++.- . +.+.+|+++-|.||||.+.. +.++.+++++ ||+++++|.+|+..-.
T Consensus 155 P~iel~~~g~FKY~vDF~~l~i--~----e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~--~giPliIDnAYg~PFP 226 (417)
T COG3977 155 PNIELLPAGQFKYHVDFEHLHI--G----ESTGAICVSRPTNPTGNVLTDEELAKLDALARQ--HGIPLIIDNAYGVPFP 226 (417)
T ss_pred CCcccccccceeeccCHHHccc--c----cccceEEecCCCCCCCCcccHHHHHHHHHHhhh--cCCcEEEecccCCCCC
Confidence 111111110 012467777643 2 46789999999999999974 6667778888 9999999999986432
Q ss_pred eecccc----c-cceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHH
Q 017726 184 DFRMDE----W-GIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLL 256 (367)
Q Consensus 184 ~~~~~~----~-~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (367)
.+-+.+ + ..-+.+.|.||. |.+| +|+++.++++++.+...... ..+ ..++ ...
T Consensus 227 ~iifsd~~~~w~~NiilC~SLSK~--GLPG~R~GIiIane~viqaitnmn~i-isL---------ap~~-----~G~--- 286 (417)
T COG3977 227 GIIFSDATPLWNENIILCMSLSKL--GLPGSRCGIIIANEKVIQAITNMNGI-ISL---------APGR-----MGP--- 286 (417)
T ss_pred ceecccccccCCCCEEEEeehhhc--CCCCcceeEEEccHHHHHHHHhccce-eee---------cCCC-----ccH---
Confidence 222211 1 245788899995 3444 79999999999887654221 000 0111 111
Q ss_pred HHHHHHHHHHHHhChHH-----HHHHHHHHHHHHHHHHHH-cC---CccccCCCccCCCceEEEEcCC-CCCHHHHHHHH
Q 017726 257 YGLRAALDLIFEEGLEN-----VIERHRRLGKATRLAVEA-WG---LKNCTQKEEWFSDTVTAVIVPS-HINSSEIVRRA 326 (367)
Q Consensus 257 ~al~~al~~~~~~g~~~-----~~~~~~~~~~~l~~~L~~-~g---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L 326 (367)
+....++ +.-.+.+ ++--+....+...+.|++ ++ +.+..| .+..+.|+++.+ .++.++|+++|
T Consensus 287 Aia~~mi---e~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkp----EGAIFlWLWf~dLPItt~~LYq~L 359 (417)
T COG3977 287 AIAAEMI---ESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKP----EGAIFLWLWFKDLPITTEELYQRL 359 (417)
T ss_pred HHHHHHh---hcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecC----CcceeehhhhccCCCCHHHHHHHH
Confidence 1111111 1111221 233345555556666665 32 333444 344566666633 46789999999
Q ss_pred HhhCCeEEccCCC---------CCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 327 WQRYNLSLGLGLN---------KVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 327 ~~~~gv~v~~g~~---------~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
+++ ||.+.||.. ++...++|+++....+..+.-.++|.
T Consensus 360 Ka~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~la 406 (417)
T COG3977 360 KAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILA 406 (417)
T ss_pred HhC-eEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHH
Confidence 766 999999843 34457899998877776666555554
No 302
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.74 E-value=3.7e-15 Score=134.70 Aligned_cols=316 Identities=19% Similarity=0.139 Sum_probs=200.6
Q ss_pred CChHHHHHHHccCCC----CCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeC
Q 017726 19 HIPDQVIRAMNRNNE----DYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLI 92 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~ 92 (367)
.-++.|.+++.++.. .+..+...+...++.++|.+.+-.+....+.|++||++|++.++... ......||....
T Consensus 72 H~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~ 151 (447)
T COG0160 72 HNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDG 151 (447)
T ss_pred CCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECC
Confidence 346677777777432 22233333556677777777776543345899999999999998642 334567888888
Q ss_pred CcchHHHHHHH-------HH-----hCCceEEEeCCCCCC----C--------CHHHHHHHHhcc--CCCCccEEEEEec
Q 017726 93 GQFSLLWIDQQ-------QR-----LNFNVDVVESDWGEG----A--------KLDVLASKLAAD--TAHTIKAICIVHN 146 (367)
Q Consensus 93 ~~~~~~~~~~~-------~~-----~g~~~~~v~~~~~~~----~--------d~e~l~~~i~~~--~~~~~~lv~~~~~ 146 (367)
+|++.....++ .. ....+..+|.+...+ . ..+.++..+.+. ...++.++++...
T Consensus 152 afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpI 231 (447)
T COG0160 152 AFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPI 231 (447)
T ss_pred cccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecc
Confidence 88875321111 10 112356666654321 1 234455544442 1256889999999
Q ss_pred CCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHH
Q 017726 147 ETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPK 217 (367)
Q Consensus 147 ~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~ 217 (367)
+.-.|.+.| +++++++|++ ||+++|+|+.|+..... +.......|+++. +|.+++...+|.++++++
T Consensus 232 QgegG~~v~p~~fl~~l~~~~~~--~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~--aK~ig~G~Pl~avv~r~e 307 (447)
T COG0160 232 QGEGGIIVPPKGFLKALRKLCRE--HGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL--AKSLGGGLPLSAVVGRAE 307 (447)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCccccchhhhhcCCCCCEEEe--cccccCCCceeEEeccHH
Confidence 999998886 7789999999 99999999999754331 2333335788877 688877666899999999
Q ss_pred HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc
Q 017726 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK 295 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~ 295 (367)
+.+ ..+.... + .+..|...+++..+.|+.+++++ +.++..+..+++++.|+++ .++
T Consensus 308 i~~-~~~g~~~---------------~---Tf~GNpva~Aaa~AvL~vie~e~---L~~~a~~~G~~l~~~L~~l~~~~~ 365 (447)
T COG0160 308 IMD-WPPGGHG---------------G---TFGGNPVACAAALAVLDVIEEEN---LLERAAELGEYLRDRLEELQEKHP 365 (447)
T ss_pred hcc-cCCcccC---------------C---CCCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHhhcC
Confidence 876 3332111 2 23456666677777888777764 5568888999999999986 466
Q ss_pred cccCCCccCCCceEEEEcCCC-----CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH--HHHHhhhh
Q 017726 296 NCTQKEEWFSDTVTAVIVPSH-----IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV--MFNFQLLF 365 (367)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~-----~~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~--~~~~~~l~ 365 (367)
.+..-.. .+.++.+.+-++ .+ .+.+++.+.++ |+.+... . ..++.+||.+--..+++ |...++|+
T Consensus 366 ~IgdVRG--~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~-G-~~~nviRi~PPL~is~e~~d~~l~il~ 440 (447)
T COG0160 366 LIGDVRG--LGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTC-G-PHGNVLRILPPLTISDEELDEGLDILE 440 (447)
T ss_pred ceecccc--cceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEecc-C-CCCcEEEEeCCcccCHHHHHHHHHHHH
Confidence 6654221 233444444221 11 34577777655 8866532 1 22578999887777655 34444443
No 303
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.74 E-value=1.4e-15 Score=145.02 Aligned_cols=227 Identities=11% Similarity=0.078 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC--
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG-- 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-- 118 (367)
.....+.++..|+.+|++. ...++||+|.++.+++.+.+.+||.||+..+.|=|.. ..+...|+.+++++...+
T Consensus 194 ~G~i~eAe~~AA~~fgAd~--tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~--haLilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADR--SYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT--HLMMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred ChHHHHHHHHHHHHhCCCc--EEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeEEEeccccccc
Confidence 3557799999999999987 3588899999999999999999999999999887753 457778999999865431
Q ss_pred ---CCCC-----HHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCce---eec
Q 017726 119 ---EGAK-----LDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI---DFR 186 (367)
Q Consensus 119 ---~~~d-----~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~---~~~ 186 (367)
+.++ .+.+++++++++. ++|+.+++++| |..|.+++++.|.+.|+. ++ +++|+||+.-.. .++
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~--~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDV--KS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCC--CC--EEEEccchhhhccCcccC
Confidence 2334 8999999988652 23447777776 899999999999999987 76 689999864211 111
Q ss_pred ---cccccc---e--EEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHH
Q 017726 187 ---MDEWGI---D--VALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYG 258 (367)
Q Consensus 187 ---~~~~~~---d--~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 258 (367)
....+. | +++-|.||.+++....+++-++.. .+...+...+..- ...+|+...+++
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~--------------vd~~~~n~a~~m~--~STSPsY~l~AS 408 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD--------------VNEETFNEAYMMH--TTTSPHYGIVAS 408 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC--------------CCHHHHHHHHHHH--cCCCcHHHHHHH
Confidence 011234 4 999999999987766566544221 1111111222211 133688889999
Q ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 259 LRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 259 l~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
+..+.+.+....-++..++..+.+..+++.|.+.
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~ 442 (714)
T PRK15400 409 TETAAAMMKGNAGKRLINGSIERAIKFRKEIKRL 442 (714)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998886333667788888899999999886
No 304
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.74 E-value=2.6e-15 Score=131.05 Aligned_cols=300 Identities=15% Similarity=0.109 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHH---HHHHccC-----CCCCeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWE---SALTNTL-----SPGDRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~---~~~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
+.+...++++++.++.|.+.- -+-.+.|+++=. ++|.+.- ...+.||+++..|..+.. + +...|.+|+
T Consensus 107 ~l~li~~Lq~~L~~ITG~Dav--sLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA-S-Aam~G~~VV 182 (496)
T COG1003 107 YLELIYELQEWLKEITGMDAV--SLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA-S-AAMAGFKVV 182 (496)
T ss_pred HHHHHHHHHHHHHHhcCCcee--eccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh-h-HhhcCceEE
Confidence 445677888888888887762 133334443322 2344331 134578888888777753 2 566899999
Q ss_pred EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-cHHHHHHHHHhcCCCcEEEEeeeeccCcee-ecccc
Q 017726 112 VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDEYRHPALFLVDGVSSICAID-FRMDE 189 (367)
Q Consensus 112 ~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-~~~~~ 189 (367)
.|++++++.+|+|+|++++.+ ++.++.+++| |..|... ++.+|+++.|+ +|..|..|++.-...+. ....+
T Consensus 183 ~V~~~~~G~VDlddLk~k~~~----~~AalMiTnP-sT~GvFE~~I~ei~~ivH~--~Gg~vY~DGANlNA~vG~~rPGd 255 (496)
T COG1003 183 VVKCDENGNVDLDDLRAKAED----NLAALMITNP-STLGVFEEDIREICEIVHE--AGGQVYYDGANLNAIVGLARPGD 255 (496)
T ss_pred EEecCCCCCccHHHHHHHhcc----ceeEEEeccC-cccccchhhHHHHHHHHHH--cCCEEEecCcchhhhhccccccc
Confidence 999999999999999999994 5688888887 4567775 79999999999 99999999986433221 23445
Q ss_pred ccceEEEecCCCcccCC-----CcceeeeeCHHHHHHhccCC----CCceeechHHHHHHhhcCCccCCCCcHHHHHHHH
Q 017726 190 WGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAK----SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLR 260 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 260 (367)
.|.|++..+.||+|+.| +|.|-+.+++.++..+.... ...+..++. ..-..+....+..+...+.-.+
T Consensus 256 ~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~---~~~s~g~~~a~~Gs~~il~~a~ 332 (496)
T COG1003 256 MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYD---GKKSIGVSAAPYGSASILPIAW 332 (496)
T ss_pred cccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCC---CCccceeeccccCcchHHHHHH
Confidence 68999999999999876 55678888877766555321 111111110 0001111112223444445566
Q ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEc-----CCCCCHHHHHHHHHhhCCeEE
Q 017726 261 AALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-----PSHINSSEIVRRAWQRYNLSL 334 (367)
Q Consensus 261 ~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~L~~~~gv~v 334 (367)
..+..+..+|+++.-+...-|++|+.++|+.. .+...+. . +...=+.+.. ..+++..+++++|.+ +|+..
T Consensus 333 ~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~-~--~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD-~GfHa 408 (496)
T COG1003 333 AYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGE-N--RVAHECILDARPLKKETGVRALDVAKRLLD-YGFHA 408 (496)
T ss_pred HHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccCCC-C--cceeEEEeechHhHhhcCCcHHHHHHHHHh-cCCCC
Confidence 67777888899999999999999999999984 3322221 1 1112233333 126788999999985 47654
Q ss_pred ccCCCCC-CCcEEEEeecCCCCHH
Q 017726 335 GLGLNKV-AGKVFRIGHLGHLNEV 357 (367)
Q Consensus 335 ~~g~~~~-~~~~iRi~~~~~~~~~ 357 (367)
-.-.+|+ -...+=|-+--.++.+
T Consensus 409 PT~~FPliV~~tLMIEPTEsEsk~ 432 (496)
T COG1003 409 PTMYFPLIVAGTLMIEPTESESKE 432 (496)
T ss_pred CcccCccccccceeecCCCCCCHH
Confidence 3322231 2334555443344433
No 305
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.73 E-value=6.9e-15 Score=136.07 Aligned_cols=288 Identities=21% Similarity=0.212 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHHH-------HhCC----
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQ-------RLNF---- 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~-------~~g~---- 108 (367)
+...++.+.+.+.......+.+.|++||++|++.++... .....+|+....+|++........ ..+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~ 162 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFP 162 (421)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 444567777777654322246899999999999988642 233457888888888853211111 0010
Q ss_pred -ceEEEeCCCCC-CC----CHHHHHHHHhcc-CCCCccEEEEEecCCCccccc-c---HHHHHHHHHhcCCCcEEEEeee
Q 017726 109 -NVDVVESDWGE-GA----KLDVLASKLAAD-TAHTIKAICIVHNETATGVTN-N---LSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 109 -~~~~v~~~~~~-~~----d~e~l~~~i~~~-~~~~~~lv~~~~~~n~tG~~~-~---~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
.+..++.+.+. .+ +++.+++.+.+. ..+++++|++...++++|... | +++|+++|++ +|+++|+|++
T Consensus 163 ~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~--~g~llI~DEv 240 (421)
T PRK09792 163 GSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDE--HGIVMIADEV 240 (421)
T ss_pred CCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEecc
Confidence 12333433211 11 347788877641 114678999999999999766 5 7889999999 9999999999
Q ss_pred eccCcee---eccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCc
Q 017726 178 SSICAID---FRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPS 252 (367)
Q Consensus 178 ~~~~~~~---~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (367)
++..... +... ....|++ +.+|.+++...+|++++++++.+.+..... .+ .+..+
T Consensus 241 ~tg~gr~G~~~a~~~~~~~pDi~--t~gK~l~~G~pigav~~~~~i~~~~~~~~~---------------~~---T~~gn 300 (421)
T PRK09792 241 QSGFARTGKLFAMDHYADKPDLM--TMAKSLAGGMPLSGVVGNANIMDAPAPGGL---------------GG---TYAGN 300 (421)
T ss_pred ccCCCCCCchhHHHhcCCCCcEE--EeehhhcCCCceEEEEEcHHHHhccCCCCc---------------CC---CCCCC
Confidence 7643221 1111 1246754 558999765568999999998877653211 12 23455
Q ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCC-CceEEEEcCCC-------CCHHHH
Q 017726 253 IQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFS-DTVTAVIVPSH-------INSSEI 322 (367)
Q Consensus 253 ~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~l 322 (367)
...+++..++++.+.+.+ ..++.+++.+++.+.|+++ .++.+.. .++ +.++++.+++. .....+
T Consensus 301 pl~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~p~v~~---vrG~Gl~~~ie~~~~~~~~~~~~~~~~l 374 (421)
T PRK09792 301 PLAVAAAHAVLNIIDKES---LCERANQLGQRLKNTLIDAKESVPAIAA---VRGLGSMIAAEFNDPQTGEPSAAIAQKI 374 (421)
T ss_pred HHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhCCCcce---ecccceEEEEEecCCccCCcchHHHHHH
Confidence 656666677888776653 3445556677777777664 2332221 123 56778887533 123567
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
++.+.++ ||.+.+. ...++.||+.+....+++++.
T Consensus 375 ~~~~~~~-Gv~i~~~--g~~~~~irl~P~l~i~~~ei~ 409 (421)
T PRK09792 375 QQRALAQ-GLLLLTC--GAYGNVIRFLYPLTIPDAQFD 409 (421)
T ss_pred HHHHHHC-CcEEeec--CCCCCEEEEeCCCcCCHHHHH
Confidence 7777654 9988531 122578999866556555444
No 306
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.73 E-value=5.3e-15 Score=137.39 Aligned_cols=290 Identities=18% Similarity=0.152 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHHHHhC-------C-----
Q 017726 43 LTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLN-------F----- 108 (367)
Q Consensus 43 ~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g-------~----- 108 (367)
...++-+.+.+..+.+..+.+++++||++|+..++... ......|+...++|++........... .
T Consensus 85 ~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~ 164 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPG 164 (425)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCC
Confidence 34467777777666443235899999999888877542 233456777788888864211111110 0
Q ss_pred ceEEEeCCCC-CCCC----HHHHHHHHhcc-CCCCccEEEEEecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeee
Q 017726 109 NVDVVESDWG-EGAK----LDVLASKLAAD-TAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 109 ~~~~v~~~~~-~~~d----~e~l~~~i~~~-~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
.+..++.+.+ ...+ ++++++++++. ..+++++|++.......|.+.+ +++|.++|++ +|+++|+|+++
T Consensus 165 ~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~--~~~~lI~Dev~ 242 (425)
T PRK08088 165 HVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDE--HGIMLIADEVQ 242 (425)
T ss_pred CcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccc
Confidence 0111111111 1122 45688877521 1145678887777666676665 8889999999 99999999998
Q ss_pred ccCcee---eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHH
Q 017726 179 SICAID---FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQL 255 (367)
Q Consensus 179 ~~~~~~---~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (367)
+..... ......+.+.-+.|++|.+++...+|++++++++++.+..... . ..+..+...
T Consensus 243 ~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~----------------~--~t~~~~~~~ 304 (425)
T PRK08088 243 TGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGGL----------------G--GTYAGNPIA 304 (425)
T ss_pred cCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCCCCC----------------C--CCCCcCHHH
Confidence 742211 1111123333356779999765558999999999887754211 1 123355555
Q ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCC--------CCHHHHHHH
Q 017726 256 LYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH--------INSSEIVRR 325 (367)
Q Consensus 256 ~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~ 325 (367)
+.+..++++....+. ..++.++..+++++.|+++ ..+.+..-. ..+.++++.+.++ ....++.+.
T Consensus 305 ~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~--g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~ 379 (425)
T PRK08088 305 CAAALAVLKVFEQEN---LLQKANALGEKLKDGLLAIAEKHPEIGDVR--GLGAMIAIELFEDGDHSKPNAKLTAQIVAR 379 (425)
T ss_pred HHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEe--ccceEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 666666777665544 3333444445555555443 122211100 1255778877322 125678888
Q ss_pred HHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 326 AWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 326 L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.++ ||.+.++... ++.+|+++....+++++.
T Consensus 380 ~~~~-Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~ 411 (425)
T PRK08088 380 ARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIR 411 (425)
T ss_pred HHhC-CCEEecCCCC--CCEEEEECCCCcCHHHHH
Confidence 8655 9888754221 467999987666555433
No 307
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.73 E-value=1e-15 Score=134.68 Aligned_cols=275 Identities=15% Similarity=0.066 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc----CC-CC---CeEEEEeCCcchHHHHHHHHHhCCceE
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT----LS-PG---DRIISFLIGQFSLLWIDQQQRLNFNVD 111 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~----~~-~g---d~vl~~~~~~~~~~~~~~~~~~g~~~~ 111 (367)
......++...++.+++.+++.+-..|.|+|++..++.... .+ .| ..++++...+ .-|.+.++.++++++
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~--~a~eK~a~yf~v~l~ 195 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVH--AAFEKAARYFEVELR 195 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHH--HHHHHHHhhEEEEEE
Confidence 34556788889999999987665677888899955444321 11 11 1233322211 127788999999999
Q ss_pred EEeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCce-------
Q 017726 112 VVESD-WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI------- 183 (367)
Q Consensus 112 ~v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~------- 183 (367)
.|+++ .+.++|+..+.+.+++ +|..++.+.++.|+|.+.|+++|.++..+. +++.+++|++.+.+..
T Consensus 196 ~V~~~~~~~~~D~~k~~~~i~e----Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~-w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 196 EVPLDEGDYRVDPGKVVRMIDE----NTIMLVGSLPNFPTGEIEDVEKLADLLLEI-WDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred eeeccccceEecHHHHHHHhcc----ceEEEEEEcCCCCccchhhHHHHHHHHHHH-hCCceeecccCccccccccccCc
Confidence 99998 5678999999999996 559999999999999999999999998774 7999999999876554
Q ss_pred -eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHH
Q 017726 184 -DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAA 262 (367)
Q Consensus 184 -~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 262 (367)
.+++...++-.+..++||+-..|.|+|+++-+.+-...-+-. +..+|. ..........++-+-.++++.+++
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~----~~~~w~---Gg~y~s~TlngSR~g~~va~~wa~ 343 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLF----FHTDWL---GGIYASPTLNGSRPGSQVAAQWAA 343 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEE----Eecccc---CccccCcccccCCcccHHHHHHHH
Confidence 345555677788999999988899998888665532211100 001110 111111112334566677899999
Q ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEE
Q 017726 263 LDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSL 334 (367)
Q Consensus 263 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v 334 (367)
+-.+.++|..+..+++.+++..+++.+++. ++.+++. ....++.+. ....+.-++.+.|.++ |..+
T Consensus 344 ~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk----p~vs~~~~~-s~~~~i~elsd~l~~~-GW~l 410 (491)
T KOG1383|consen 344 LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK----PLVSFILFG-SNDVNIFELSDLLRKK-GWIL 410 (491)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC----CcEEEEEcc-CCccchhhhhHHHHhc-CcCc
Confidence 999999999999999999999999999998 8999885 232233332 2456778899999755 7544
No 308
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=3.4e-14 Score=131.93 Aligned_cols=306 Identities=16% Similarity=0.176 Sum_probs=184.4
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
++.+.+++.++... ...+...+...++-+.|.+...... +.+.|++||++|++.++... .....+|+....+|
T Consensus 59 ~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~y 137 (443)
T PRK08360 59 NPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDN-PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSY 137 (443)
T ss_pred CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCC-CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCc
Confidence 45555555554332 1112223445677777877765432 36999999999999988642 23345677777778
Q ss_pred chHHHHHHHHHhC------------CceEEEeCCCCCC------------CCHHHHHHHHhcc-CCCCccEEEEEecCCC
Q 017726 95 FSLLWIDQQQRLN------------FNVDVVESDWGEG------------AKLDVLASKLAAD-TAHTIKAICIVHNETA 149 (367)
Q Consensus 95 ~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~d~e~l~~~i~~~-~~~~~~lv~~~~~~n~ 149 (367)
++....... ..+ ..+..++.+.... -+++.++++++.. ..+++++|++...+|+
T Consensus 138 HG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~ 216 (443)
T PRK08360 138 YGSTYGAMS-LTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGD 216 (443)
T ss_pred CCcCHHHHH-hcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCC
Confidence 775321111 111 1133343332110 1234566666531 1157899999988899
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCceee-----ccccccceEEEecCCCcccCCCcceeeeeCHHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAIDF-----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~-----~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~ 220 (367)
+|.+++ ++++.++|++ +|+++|+|+++......- .......|+++. +|.+++...+|++++++++++
T Consensus 217 ~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~pigav~~~~~i~~ 292 (443)
T PRK08360 217 AGMIVPPEDYFKKLKKILDE--HGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPISATIGRAEIMD 292 (443)
T ss_pred CCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCccchhhhhcCCCCCEEEe--cccccCCceeEEEEEcHHHHh
Confidence 998876 7789999999 999999999987432211 111234577654 899975444799999999887
Q ss_pred HhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCcccc
Q 017726 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCT 298 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 298 (367)
.+..... + ..+..+...+++..++++.+.+.+ ..++.+++.+++++.|+++ ...++.
T Consensus 293 ~~~~~~~----------------~--~T~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~ 351 (443)
T PRK08360 293 SLPPLAH----------------A--FTLSGNPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIG 351 (443)
T ss_pred hhcCCCC----------------C--CCCCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 7753210 1 122345555677777888877654 4567777888888888775 344333
Q ss_pred CCCccCCCceEEEEcCCC--------CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSH--------INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~--------~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.-. -.+.++.+.+.+. .....+.+.+.+ +||.+.+. .+..+|+++....+++|+.
T Consensus 352 ~vr--g~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~----~~~~lr~~P~l~~t~~~id 414 (443)
T PRK08360 352 DVR--GIGLMIGVDLVKDRETKERAYEEAAKVVWRAWE-LGLIVTFF----SGNVLRIQPPLTIEKEVLD 414 (443)
T ss_pred eee--ccceEEEEEEecCCcccCccHHHHHHHHHHHHH-CCeEEeec----CCCEEEEeCCCCCCHHHHH
Confidence 211 1333454544211 013467777765 49988642 2467999877777666544
No 309
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.71 E-value=6.4e-16 Score=134.12 Aligned_cols=272 Identities=13% Similarity=0.105 Sum_probs=184.1
Q ss_pred CCCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------------
Q 017726 16 GPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------------ 81 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------------ 81 (367)
.|..+..+.+.+..+.+.. ...|.+.-...++-....+..|.+..-+-+|++||+-++..++.+..
T Consensus 113 D~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm 192 (510)
T KOG0629|consen 113 DPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGM 192 (510)
T ss_pred CHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhh
Confidence 4555555566555554332 11344555667788888889999864336899999977777664321
Q ss_pred --CCCCeEEEEeCCcchHHHHHHHHHhC---CceEEEeCCCCCCCCHHHHHHHHhccCC--CCccEEEEEecCCCccccc
Q 017726 82 --SPGDRIISFLIGQFSLLWIDQQQRLN---FNVDVVESDWGEGAKLDVLASKLAADTA--HTIKAICIVHNETATGVTN 154 (367)
Q Consensus 82 --~~gd~vl~~~~~~~~~~~~~~~~~~g---~~~~~v~~~~~~~~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~ 154 (367)
-|.-.+.++...|||. .+.+..+| -+++.|++++.|.+++++||++|.+... -.|-+|..+...+..|.+.
T Consensus 193 ~~~p~lilFtSeesHYSi--~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD 270 (510)
T KOG0629|consen 193 FALPPLILFTSEESHYSI--KKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD 270 (510)
T ss_pred hcCCcEEEEecccchhhH--HHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC
Confidence 1222334455566664 35566666 6889999999999999999999988531 1256777888889999999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeeeccCcee-------eccccccceEEEecCCCcccCCCcceeeeeCHHH-HHHhccCC
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVSSICAID-------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA-LEASKTAK 226 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~-~~~~~~~~ 226 (367)
|+..|+++|++ |+.|++||+|.+.+.+- +... ..++.+..++||+++.|..++....+.+- +++.....
T Consensus 271 dL~~iadiC~k--~~lWmHvDAAwGGglLmS~k~R~kl~Gi-era~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~ 347 (510)
T KOG0629|consen 271 DLNGIADICEK--HKLWMHVDAAWGGGLLMSRKHRHKLTGI-ERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMS 347 (510)
T ss_pred cHHHHHHHHHh--cCEEEEeecccccccccChhhHhhccCc-cccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccc
Confidence 99999999999 99999999998865431 1111 25789999999999888878877776665 33322211
Q ss_pred C------Ccee-echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 017726 227 S------VRVF-FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT 298 (367)
Q Consensus 227 ~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (367)
. ..+| ..+....+..+.|+ ..++ .-++..++.-...|.++.++++.++++||.++|++. |+..+.
T Consensus 348 A~YLFq~dK~YdvS~DTgdK~iQCGR----h~D~---FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~ 420 (510)
T KOG0629|consen 348 AIYLFQQDKFYDVSYDTGDKAIQCGR----HVDV---FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLF 420 (510)
T ss_pred hhhhhccCceeecccccccchhhcCc----cccH---HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehh
Confidence 1 1111 11222233444453 2344 345555565566789999999999999999999998 655554
Q ss_pred C
Q 017726 299 Q 299 (367)
Q Consensus 299 ~ 299 (367)
.
T Consensus 421 ~ 421 (510)
T KOG0629|consen 421 E 421 (510)
T ss_pred c
Confidence 3
No 310
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.71 E-value=2.1e-14 Score=132.45 Aligned_cols=309 Identities=16% Similarity=0.152 Sum_probs=184.7
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCC--CCceEEe-cCChhHHHHHHHHcc--CCCCCeEEEEe
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT--SGTPFLI-PTTGTGAWESALTNT--LSPGDRIISFL 91 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~--~~~~v~~-~~ggt~al~~~~~~~--~~~gd~vl~~~ 91 (367)
++.+.+++.++... +......+...++-+++.+.+..+ ..+.+.| ++||++|++.++... .....+|+...
T Consensus 53 ~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~ 132 (412)
T TIGR02407 53 NPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFT 132 (412)
T ss_pred CHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEEC
Confidence 56666666664331 111112344556777777764222 1223556 589999999988642 23346788888
Q ss_pred CCcchHHHHHHHH------H--hC---CceEEEeCCCCCC---CCHHHHHHHHhccCC--CCccEEEEEecCCCcccccc
Q 017726 92 IGQFSLLWIDQQQ------R--LN---FNVDVVESDWGEG---AKLDVLASKLAADTA--HTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 92 ~~~~~~~~~~~~~------~--~g---~~~~~v~~~~~~~---~d~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~~ 155 (367)
.+|++........ . .+ ..+..+|.+.... -+++.+++.++++.. +++.+|++....+..|.+.+
T Consensus 133 ~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~ 212 (412)
T TIGR02407 133 NAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVA 212 (412)
T ss_pred CCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccC
Confidence 8888864211111 0 11 1223344321100 246778888864321 25688899988899998653
Q ss_pred ----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccC-CCcceeeeeCHHHHHHhccC
Q 017726 156 ----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTA 225 (367)
Q Consensus 156 ----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g-~~g~g~~~~~~~~~~~~~~~ 225 (367)
+++|+++|++ +|+++|+|++++.... .........|++++ +|++++ ...+|++++++++ +.+...
T Consensus 213 ~~~~l~~l~~lc~~--~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~--~K~lg~~G~pigav~~~~~~-~~~~~~ 287 (412)
T TIGR02407 213 SDEWLQRLEKLCRR--HDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCL--SKSISGYGLPLALTLIKPEL-DVWKPG 287 (412)
T ss_pred CHHHHHHHHHHHHH--cCCEEEEechhhCCCccchhHHhcccCCCCCEEEe--chhccCCccceeEEEEchhh-hccCCC
Confidence 7889999999 9999999999862211 12223345787765 599864 4447999998875 444311
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHH-HHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDL-IFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKE 301 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~-~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~ 301 (367)
. ..+ .++.+...+++..++++. +.+. +..++..+..+++.+.|+++ .+. .....
T Consensus 288 ~---------------~~~---T~~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~v- 345 (412)
T TIGR02407 288 E---------------HNG---TFRGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELIKQV- 345 (412)
T ss_pred c---------------cCC---CCCccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCceEee-
Confidence 0 012 334566666677778885 4443 34556677777777777663 222 11111
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...+.++++.+++.....++.+.+.++ ||.+.+.- ..++.+|+++....+++|+.
T Consensus 346 -rg~Gl~~~l~l~~~~~~~~~~~~~~~~-Gv~v~~~~--~~~~~lr~~p~l~~t~~~i~ 400 (412)
T TIGR02407 346 -RGRGLMQGIECGDGDLAGKIAKAAFEN-GLIIETSG--PNDEVIKLLPPLTIDEETLQ 400 (412)
T ss_pred -ecceeEEEEEecChHHHHHHHHHHHHC-CCEEeccC--CCCCEEEEECCCCCCHHHHH
Confidence 124557788885443356788888755 99987531 12467999987777766544
No 311
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.71 E-value=1.8e-15 Score=126.04 Aligned_cols=307 Identities=15% Similarity=0.104 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCC---eEEEEeCCcchHH--HHHHHHHhCCceE----E
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGD---RIISFLIGQFSLL--WIDQQQRLNFNVD----V 112 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd---~vl~~~~~~~~~~--~~~~~~~~g~~~~----~ 112 (367)
..-+-....++.+.|+.+.+ |.+.++-|.-+..++.++..|-. +|+...-.++|.. +.+.++.-|+++. .
T Consensus 111 ~~De~il~l~~~iVGA~e~E-vavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ 189 (465)
T KOG3846|consen 111 SIDEPILPLLAPIVGAQENE-VAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQ 189 (465)
T ss_pred ecchhhhhhhhhhccCCchh-hhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEE
Confidence 33445667788999998865 88889888888888888776543 5666655555543 4466777787643 2
Q ss_pred EeCCC-CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeecccccc
Q 017726 113 VESDW-GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWG 191 (367)
Q Consensus 113 v~~~~-~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~ 191 (367)
+.-.+ +..+-.|++...|++++ ....+|+++..+..||...|+.+|...-+. .|++|=.|-+|+.+-.+.-+..|+
T Consensus 190 iePREGEetlRteDILd~IEkng-DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~--kgc~VGfDLAHAvgNVpL~LHdWg 266 (465)
T KOG3846|consen 190 IEPREGEETLRTEDILDTIEKNG-DEIALVCFSGVQYYTGQYFDIGAITFAGQF--KGCLVGFDLAHAVGNVPLQLHDWG 266 (465)
T ss_pred ecccccccchhHHHHHHHHHhcC-CeEEEEEeecceeecccccchhhhhhcccC--CCcEechhhhhhhcCCceEEeecC
Confidence 32222 23566788888888876 567889999999999999999999976666 899999999999999999999999
Q ss_pred ceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHH---HHhh----cCCccCCCCcHHHHHHHHHHH
Q 017726 192 IDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI---KFYN----LGTFWPYTPSIQLLYGLRAAL 263 (367)
Q Consensus 192 ~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~al~~al 263 (367)
+||.+.+++|+++.. .|+|.+.+..++.....+...+.+..+....- ..++ ..+|-...|++...+++..+|
T Consensus 267 VDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SL 346 (465)
T KOG3846|consen 267 VDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSL 346 (465)
T ss_pred CceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhH
Confidence 999999999999654 55788888888766555554443333211110 0011 011112348899999999999
Q ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCc-----------cccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCC
Q 017726 264 DLIFEEGLENVIERHRRLGKATRLAVEAW-GLK-----------NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYN 331 (367)
Q Consensus 264 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 331 (367)
+.+.+..+++++++..-+..|+...++.. |.+ ++.|..-...+....+.+.. +...+.+.|.+ +|
T Consensus 347 e~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss--p~~~vfqeL~k-rG 423 (465)
T KOG3846|consen 347 ELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS--PTPKVFQELHK-RG 423 (465)
T ss_pred HHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC--CchHHHHHHHH-cC
Confidence 99998889999999999998888877764 533 34443323345566666632 44688899964 48
Q ss_pred eEEccCCCCCCCcEEEEeecC-CCCHHHH
Q 017726 332 LSLGLGLNKVAGKVFRIGHLG-HLNEVMF 359 (367)
Q Consensus 332 v~v~~g~~~~~~~~iRi~~~~-~~~~~~~ 359 (367)
+.+. ...++.||+++.. +++..|.
T Consensus 424 v~~D----kR~PNvIRvAPvpLYN~f~Dv 448 (465)
T KOG3846|consen 424 VIGD----KRRPNVIRVAPVPLYNTFSDV 448 (465)
T ss_pred eecc----ccCCCceEeecchhhccHHHH
Confidence 8653 2345789999866 6665554
No 312
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.71 E-value=2.9e-14 Score=131.52 Aligned_cols=309 Identities=14% Similarity=0.090 Sum_probs=187.9
Q ss_pred hHHHHHHHccCCCC--CC--CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CCCCeEEE
Q 017726 21 PDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPGDRIIS 89 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~gd~vl~ 89 (367)
++++.+++.++... +. .....+...++.++|+++.... .+.+.|++||++|++.++.... .+..+|+.
T Consensus 61 ~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~-~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~ 139 (428)
T PRK07986 61 HPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQP-LECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLT 139 (428)
T ss_pred CHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 45666666665432 11 1112344567777777776432 2469999999999999886421 23467888
Q ss_pred EeCCcchHHHHHHHHHhC-------------CceEEEeCCCCC------CCCHHHHHHHHhccCCCCccEEEEEec-CCC
Q 017726 90 FLIGQFSLLWIDQQQRLN-------------FNVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHN-ETA 149 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~------~~d~e~l~~~i~~~~~~~~~lv~~~~~-~n~ 149 (367)
...+|++........ .+ ..+..++..... .-|++++++.+++.. +++.+|++... +..
T Consensus 140 ~~~~yHG~t~~a~s~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~-~~iaavi~Epi~~g~ 217 (428)
T PRK07986 140 LRHGYHGDTFGAMSV-CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHR-HEIAAVILEPIVQGA 217 (428)
T ss_pred ECCCcCCCcHhhhcc-cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCC-CcEEEEEEechhcCc
Confidence 888888753211110 01 112233322110 125678888886543 45677777764 555
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKAL 219 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~ 219 (367)
.|.+.+ +++|+++|++ +|+++|+||++..... .........|+++ .+|.++|. ..+|.+++++++.
T Consensus 218 gg~~~~~~~~L~~l~~lc~~--~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~gG~~p~~av~~~~~i~ 293 (428)
T PRK07986 218 GGMRIYHPEWLKRVRKLCDR--EGILLIADEIATGFGRTGKLFACEHAGIAPDILC--LGKALTGGTMTLSATLTTREVA 293 (428)
T ss_pred CCcccCCHHHHHHHHHHHHH--cCCEEEEeccccCCccCCCeeeecccCCCCCEEE--echhhhCCcccCcchhchHHHH
Confidence 665542 7899999999 9999999999853221 1122233468885 58988665 3468888999988
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT 298 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (367)
+.+.......+. .+. .++.+...+++..++++.+.+.+ ..++..++.++|.+.|+++ ..+.+.
T Consensus 294 ~~~~~~~~~~~~-----------~~~--T~~g~p~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~ 357 (428)
T PRK07986 294 ETISNGEAGCFM-----------HGP--TFMGNPLACAVANASLSLLESGD---WQQQVAAIEAQLREELAPLRDAPMVA 357 (428)
T ss_pred HHhhcCCCCccc-----------cCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 777532100000 121 33466777788888888887764 3667888888999988886 433332
Q ss_pred CCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.-. -.+.+..+.+.+..+...+.+.+.++ ||.+.+. ++.+|+.+.-..+++++.
T Consensus 358 ~vR--g~Gl~~~ve~~~~~~~~~~~~~l~~~-Gl~~~~~-----g~~i~~~Ppl~it~~ei~ 411 (428)
T PRK07986 358 DVR--VLGAIGVVETTRPVNMAALQRFFVEQ-GVWIRPF-----GKLIYLMPPYIILPEQLQ 411 (428)
T ss_pred eEe--ccceEEEEEeCCcccHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCCCCHHHHH
Confidence 110 12335555553333456788888655 9998652 357999876666655443
No 313
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=3.7e-14 Score=131.24 Aligned_cols=286 Identities=20% Similarity=0.143 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHHHHhCC-----------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLNF----------- 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~----------- 108 (367)
+...++-+.+.++......+.+.|++||++|++.++... .....+|+....+|++....... ..+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s-~t~~~~~~~~~~~~~ 161 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMA-LTGKVAPYKVGFGPF 161 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHh-hcCCCcccccCCCCC
Confidence 344567777777765332346899999999999988642 23345688888888886421111 1111
Q ss_pred --ceEEEeCCCCC-----CCCHHHHHHHHhc--cCCCCccEEEEEecCCCcccc-cc---HHHHHHHHHhcCCCcEEEEe
Q 017726 109 --NVDVVESDWGE-----GAKLDVLASKLAA--DTAHTIKAICIVHNETATGVT-NN---LSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 109 --~~~~v~~~~~~-----~~d~e~l~~~i~~--~~~~~~~lv~~~~~~n~tG~~-~~---~~~i~~~~~~~~~~~~vi~D 175 (367)
.+..++.+... ..+++.+++.+.+ .+ +++.+|++....+..|.. .| +++|.++|++ +|+++|+|
T Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~-~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~--~g~llI~D 238 (421)
T PRK06777 162 PGSIFHALYPNELHGVSVEEALSSVERLFKADIAP-DQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDE--HGILLIAD 238 (421)
T ss_pred CCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCC-CceEEEEECCccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEe
Confidence 11222222111 1135667777753 22 467888888888888864 44 8899999999 99999999
Q ss_pred eeeccCcee---eccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCC
Q 017726 176 GVSSICAID---FRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250 (367)
Q Consensus 176 ~~~~~~~~~---~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+++...... +... ....|++ +.+|.+++...+|++++++++++.+..... +. .+.
T Consensus 239 Ev~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pigav~~~~~i~~~~~~~~~----------------~~--T~~ 298 (421)
T PRK06777 239 EVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGL----------------GG--TYA 298 (421)
T ss_pred chhhCCccCCchhhhhhcCCCCCEE--eeehhhcCCCceEEEEEcHHHHhccCCCCC----------------CC--CCC
Confidence 998743211 1111 2236766 568999755557999999998776653211 11 234
Q ss_pred CcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCC---CCCH----HH
Q 017726 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPS---HINS----SE 321 (367)
Q Consensus 251 ~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~ 321 (367)
.+...+++..++++.+.++ .+.++..++.+++.+.|+++ ..+.+..-. ..+.++.+.+.+ +.+. ..
T Consensus 299 ~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--g~G~~~~i~~~~~~~~~~~~~~~~~ 373 (421)
T PRK06777 299 GNPLAVAAALAVLDVIAEE---KLCQRALILGAHLVEVLEKAKASCPAIVDIR--ARGSMVAVEFNDPQTGKPSPEFTRQ 373 (421)
T ss_pred cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeEEec--CceEEEEEEEecCccCCccHHHHHH
Confidence 5666677777788877664 45667888888888888875 222221100 122344443311 1112 23
Q ss_pred HHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 322 IVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 322 l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+.+.+.+ .||.+.++-.. ++++|+++....+++++
T Consensus 374 l~~~~~~-~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i 408 (421)
T PRK06777 374 YQRQALE-EGLLLLSCGVH--GNVIRFLYPLTIPDAQF 408 (421)
T ss_pred HHHHHHh-CCeEEeecCCC--CCEEEEeCCCCCCHHHH
Confidence 4444444 59999875322 46899997545554443
No 314
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.71 E-value=4e-14 Score=132.96 Aligned_cols=293 Identities=14% Similarity=0.102 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeEEEEeCCcchHHHHHHHHHhCCc---
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRIISFLIGQFSLLWIDQQQRLNFN--- 109 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~vl~~~~~~~~~~~~~~~~~~g~~--- 109 (367)
.+...++.++|.+.+.-.+...+.|++||++|+..++.... . + ..+||....+|++..+.. ....|.+
T Consensus 132 ~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a-~slsg~~~~~ 210 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLIS-ASLSGLPALH 210 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhh-hhccCChhhc
Confidence 34556777777777532222358999999999999887532 1 2 357888888888864321 1112211
Q ss_pred ---------eEEEeCCCCCC-------------CCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHH
Q 017726 110 ---------VDVVESDWGEG-------------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLL 163 (367)
Q Consensus 110 ---------~~~v~~~~~~~-------------~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~ 163 (367)
+..++.+..++ ...+++++++.+...+++.+|++.......|.+.| +++++++|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc 290 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVL 290 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 22233221111 01245777765322145788888888888898887 99999999
Q ss_pred HhcCCCcEEEEeeeec-cCcee----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhccCCCCceeechHHH
Q 017726 164 DEYRHPALFLVDGVSS-ICAID----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDY 237 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~-~~~~~----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
++ +|+++|+||++. +|-.- .......+|++++ .|.++|.. .+|.+++++++.+.+........
T Consensus 291 ~~--~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl--gK~lggG~~PigAv~~~~~i~d~~~~~~~~~~------- 359 (504)
T PLN02760 291 KK--YDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL--AKALSSAYMPIGAVLVSPEISDVIHSQSNKLG------- 359 (504)
T ss_pred HH--cCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe--cccccCCccccceEeecHHHHhhhhccccccc-------
Confidence 99 999999999984 43221 1222234787665 78886642 36889999998877653110000
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCC
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
.+..+. .++.+...+++..++|+.+++++ +.++.+++.++|++.|+++ ...++..-. -.+.++.+.+.+.
T Consensus 360 --~~~h~~--T~~gnPl~~Aaala~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vr--G~Gl~~gie~~~~ 430 (504)
T PLN02760 360 --SFAHGF--TYSGHPVSCAVALEALKIYKERN---IPEHVNKIAPRFQDGIKAFSGSPIIGEIR--GTGLILGTEFVDN 430 (504)
T ss_pred --CcccCC--CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEE--eCceEEEEEEecC
Confidence 001121 33456667777788888887764 4567788888888888775 333322111 1233555544221
Q ss_pred CC-----------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 IN-----------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 ~~-----------~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.. ...+.+.+.+ +||.+.+. +..+|+++....+++|++
T Consensus 431 ~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~-----g~~lrl~Ppl~it~eeid 479 (504)
T PLN02760 431 KSPNDPFPAEWGVGAYFGAECKK-RGMLVRVA-----GDNIMMSPPLIITPEEVD 479 (504)
T ss_pred CcccccccchhHHHHHHHHHHHh-CCcEEEec-----CCEEEEECCCCCCHHHHH
Confidence 11 3346677765 49988652 346899977666655443
No 315
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.70 E-value=1.8e-14 Score=137.45 Aligned_cols=225 Identities=13% Similarity=0.100 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-C-
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW-G- 118 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~- 118 (367)
.....+.++..|+.+|++. ...++||+|.++.+++.+.+.+||+||+..+.|=|.. ..+...|+.+++++... .
T Consensus 194 ~G~i~eAe~~aA~~fgAd~--tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~--~aLilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQ--SYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA--HLLMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHhCCCc--EEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH--HHHHHcCCeeEEeccccccc
Confidence 3557789999999999987 3588899999999999999999999999999887753 45777899999986442 1
Q ss_pred ---CCCCH-----HHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCc-EEEEeeeeccCce--e-e
Q 017726 119 ---EGAKL-----DVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPA-LFLVDGVSSICAI--D-F 185 (367)
Q Consensus 119 ---~~~d~-----e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~-~vi~D~~~~~~~~--~-~ 185 (367)
+.++. +.+++++++++. ++|+.+++++| |..|.+++++.|.+.| |+ ++++|+||+.-.. + +
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~-----g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL-----DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh-----CCCEEEEeccchhhhhcCccc
Confidence 23455 999999998652 35578888876 8999999999999998 34 3479999874211 1 1
Q ss_pred c----ccc-ccceEE---EecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHH
Q 017726 186 R----MDE-WGIDVA---LTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLY 257 (367)
Q Consensus 186 ~----~~~-~~~d~~---~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (367)
. +.. .+.|.+ +-|.||.+++....+++-++..+ +...+...+..- ...+|+...++
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v--------------d~~~~n~a~~m~--~STSPsY~LmA 407 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY--------------DEETFNEAFMMH--TSTSPSYPIVA 407 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC--------------CHHHHHHHHHHH--cCCCcHHHHHH
Confidence 1 111 135666 88999999988777888664421 111111222211 13368899999
Q ss_pred HHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHc
Q 017726 258 GLRAALDLIFE-EGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 258 al~~al~~~~~-~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
++..+.+.+.. .| ++..++..+.+..+++.|.+.
T Consensus 408 SLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~ 442 (713)
T PRK15399 408 SVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRL 442 (713)
T ss_pred HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhc
Confidence 99999999885 54 667788888888899888875
No 316
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=3.7e-14 Score=131.05 Aligned_cols=310 Identities=12% Similarity=0.067 Sum_probs=191.0
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEE
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl 88 (367)
.+++.+++.++... + ......+...++.+++.+.+... .+.+.|++||++|++.++.... .+ ..+|+
T Consensus 62 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii 140 (429)
T PRK06173 62 HPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFA 140 (429)
T ss_pred CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEE
Confidence 45666666664332 1 11112345567777777776422 2469999999999999886421 12 35688
Q ss_pred EEeCCcchHHHHHHHH-------HhC-----CceEEEeCCCCC------CCCHHHHHHHHhccCCCCccEEEEEec-CCC
Q 017726 89 SFLIGQFSLLWIDQQQ-------RLN-----FNVDVVESDWGE------GAKLDVLASKLAADTAHTIKAICIVHN-ETA 149 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~-------~~g-----~~~~~v~~~~~~------~~d~e~l~~~i~~~~~~~~~lv~~~~~-~n~ 149 (367)
....+|++..+..... ..+ ..+..+|.+... .-+++.+++.+.++. +++.+|++... ...
T Consensus 141 ~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~-~~iAAvi~EPi~qg~ 219 (429)
T PRK06173 141 TIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKG-DEIAALILEPVVQGA 219 (429)
T ss_pred EECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCC-CcEEEEEEcchhhcc
Confidence 8888888853221110 000 012233322110 013566778886543 56788888875 777
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-CcceeeeeCHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKAL 219 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~ 219 (367)
.|.+.+ +++++++|++ +|+++|+|+++...... ........|+++ .+|.++|. ..++.+++++++.
T Consensus 220 gG~~~~~~~yl~~l~~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~~p~~a~~~~~~i~ 295 (429)
T PRK06173 220 GGMYFYSPTYLVKARELCDQ--YGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMC--IGKALTGGYLTLSATITTEAIA 295 (429)
T ss_pred CCcccCCHHHHHHHHHHHHH--cCCeEEecchhcCCCcCCcchHHHhcCCCCCEEE--eehhhhCCccccceEEecHHHH
Confidence 787754 7789999999 99999999998532211 122233578887 58988665 2468888999987
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCT 298 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 298 (367)
+.+.......+ ..++ .+..+...+++..++++.+.+++ ..++..++.++|++.|+++ +++.+.
T Consensus 296 ~~~~~~~~~~~-----------~~~~--T~~g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~v~ 359 (429)
T PRK06173 296 QTICSGEAKCF-----------MHGP--TFMANPLACAIAAESIRLLLESP---WQQNIQRIEAQLKQELAPAAEFDSVA 359 (429)
T ss_pred HHHhcCCCCcc-----------ccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCee
Confidence 76642111000 0121 23456777788888888887764 3567888889999999875 554332
Q ss_pred CCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.-. ..+.++.+.+.+..+...+.+.|.++ ||.+.+. ++.+|+.+.-..+++++.
T Consensus 360 ~vR--g~Gl~~~iel~~~~~~~~i~~~l~e~-Gi~v~~~-----g~~l~~~Ppl~it~~ei~ 413 (429)
T PRK06173 360 EVR--VLGAIGVVEMKEPVNMATLQPRFVEH-GIWVRPF-----GKLVYIMPPFIISPDELS 413 (429)
T ss_pred eee--ccceEEEEEeCCcccHHHHHHHHHHC-CeEEEec-----CCEEEEeCCccCCHHHHH
Confidence 110 13446666664433456788888765 9998652 358999887777765544
No 317
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=1.6e-14 Score=132.39 Aligned_cols=298 Identities=14% Similarity=0.100 Sum_probs=178.0
Q ss_pred hHHHHHHHccCCCC--CCCC-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------CCC-CeEEEE
Q 017726 21 PDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------SPG-DRIISF 90 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~-~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~~g-d~vl~~ 90 (367)
.+++.+++.++... +... ...+...++.+.+.+..+ .+.++|++||++|++.++.... .+| ++|++.
T Consensus 54 ~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~---~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~ 130 (395)
T PRK03715 54 NPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHSC---FDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITF 130 (395)
T ss_pred CHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhccC---CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEE
Confidence 45666666654322 1111 112333444444444322 2459999999999999887542 123 568888
Q ss_pred eCCcchHHHHHHHHHhCCceE---EEeCCCCC----CCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHH
Q 017726 91 LIGQFSLLWIDQQQRLNFNVD---VVESDWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKV 159 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~---~v~~~~~~----~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i 159 (367)
+..|++..... ....+.... ..|...+. ..|++++++++. +++++|++...++..|.+.| ++++
T Consensus 131 ~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l 205 (395)
T PRK03715 131 DHSFHGRTLAT-MSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQL 205 (395)
T ss_pred CCCcCCChHHH-HhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHH
Confidence 88888764322 222232111 11111111 137889998886 35689999988888888876 8999
Q ss_pred HHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeech
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW 234 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
+++|++ +|+++|+|++++..... ........|++++ +|.+++...+|.+++++++.. +.. ..
T Consensus 206 ~~l~~~--~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~~~i~~-~~~----~~---- 272 (395)
T PRK03715 206 RALTKQ--HGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAKAEVAV-FEA----GD---- 272 (395)
T ss_pred HHHHHH--cCCEEEEeccccCCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEcccccc-ccC----CC----
Confidence 999999 99999999998732111 1222234687655 699976544688888888742 111 00
Q ss_pred HHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEE
Q 017726 235 KDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 312 (367)
..+ .++.+...+++..++++.+.+++ +.++..++.++|++.|+++ ...+ ..-. -.+.++.+.
T Consensus 273 -------~~~---T~~g~pl~~aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~i-~~vr--G~Glm~~i~ 336 (395)
T PRK03715 273 -------QGG---TYNGNPLMTAVGVAVISQLLAPG---FLEGVRARGEYLKEKLLELSEERGL-EGER--GEGLLRALL 336 (395)
T ss_pred -------cCC---CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHhhcCCc-CeEE--cceeEEEEE
Confidence 012 22455666777788888887653 5667888888888888775 1221 1100 134566666
Q ss_pred cCCCCCHHHHHHHHHh--hCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 313 VPSHINSSEIVRRAWQ--RYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 313 ~~~~~~~~~l~~~L~~--~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.+. ....+.+.+.+ +.||.+... .++.+|+++....+++++.
T Consensus 337 l~~~-~~~~~~~~~~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~ 381 (395)
T PRK03715 337 LGKD-IGPQIVEKARDMQPDGLLLNAP----RPNLLRFMPALNVTTEEID 381 (395)
T ss_pred ecCc-hHHHHHHHHHhccCCCEEEeec----CCCEEEEeCCcccCHHHHH
Confidence 6321 23344444432 238887642 1367999988877766544
No 318
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.70 E-value=2.1e-14 Score=132.66 Aligned_cols=309 Identities=15% Similarity=0.069 Sum_probs=190.2
Q ss_pred hHHHHHHHccCCCC---CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--C---CCCCeEEEEeC
Q 017726 21 PDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--L---SPGDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~---~~gd~vl~~~~ 92 (367)
++++.+++.++... ...+...+...++.++|.+.....- +.+.|++||++|+..++... . ....+|+....
T Consensus 93 hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~ 171 (442)
T TIGR03372 93 NPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASG 171 (442)
T ss_pred CHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECC
Confidence 45566666654321 1112223555677777777764332 35899999999999988642 1 12457888888
Q ss_pred CcchHHHHHHHHHhC------------CceEEEeCCCCCCCCHHHHHHHHhc---cCCCCccEEEEEecCCCcccccc--
Q 017726 93 GQFSLLWIDQQQRLN------------FNVDVVESDWGEGAKLDVLASKLAA---DTAHTIKAICIVHNETATGVTNN-- 155 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~d~e~l~~~i~~---~~~~~~~lv~~~~~~n~tG~~~~-- 155 (367)
+|++........ .+ ..+..+|.+ |.+++++.+++ +. .++.+|++.......|.+.|
T Consensus 172 ~yHG~t~~~ls~-t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~-~~vAavIvEpv~g~gG~~~p~~ 244 (442)
T TIGR03372 172 AFHGKSLGALSA-TAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECKKTG-DDVAAIILEPIQGEGGVILPPE 244 (442)
T ss_pred CccCCCHHHhhc-cCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCC-CcEEEEEEeCccCCCCcccCCH
Confidence 888864211111 11 112223322 67777777753 22 46788899988888898887
Q ss_pred --HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCC
Q 017726 156 --LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKS 227 (367)
Q Consensus 156 --~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~ 227 (367)
+++++++|++ +|+++|+||++...... +.......|+++ .+|.+++. ..+|.+++++++.+.+...
T Consensus 245 ~yl~~l~~lc~~--~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~~~i~~~~~~~-- 318 (442)
T TIGR03372 245 GYLPAVRALCDE--FGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIATEAVFSVLFDN-- 318 (442)
T ss_pred HHHHHHHHHHHH--cCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEecHHHHHhhhcc--
Confidence 8999999999 99999999998532211 112223478876 58999764 2468888898887766311
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccC
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWF 304 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~ 304 (367)
.+.. ++ .+..+...+++..++|+.+++++ +.++.++..+++++.|+++ .++ .+..-. -
T Consensus 319 -~~~~-----------~~--T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR--G 379 (442)
T TIGR03372 319 -PFLH-----------TT--TFGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR--G 379 (442)
T ss_pred -Cccc-----------cC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe--c
Confidence 0000 11 33456667777888888887765 3446677788888888775 232 222111 1
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH--Hhhhh
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN--FQLLF 365 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~--~~~l~ 365 (367)
.+.++.+.+.+......+++.|.++ ||.+..... .++.+|+.+....+++|++ ..+|+
T Consensus 380 ~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 380 KGLLMAIEFRDNEIGYAFAKELFQQ-NILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAK 439 (442)
T ss_pred ceEEEEEEeCChHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 3445666663332345788888764 999864321 2367999887766665444 44443
No 319
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.70 E-value=8e-15 Score=126.89 Aligned_cols=294 Identities=13% Similarity=0.085 Sum_probs=158.5
Q ss_pred CCC-cHHHHHHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHH-cc----C--------CCCCeEEEEeCCcchHHHH
Q 017726 36 RSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALT-NT----L--------SPGDRIISFLIGQFSLLWI 100 (367)
Q Consensus 36 ~~~-~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt-~al~~~~~-~~----~--------~~gd~vl~~~~~~~~~~~~ 100 (367)
+.| +..+...|+|+.+++++|++.++ +++.+|++ ..+.-++. ++ . .+.-+.|.+.|+|--+ +
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~-viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH-F- 138 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPEN-VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH-F- 138 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGG-EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH-H-
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHH-EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH-H-
Confidence 455 66788999999999999999876 66655555 33333332 21 1 1234788899987544 3
Q ss_pred HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEE-ecCCCccccccHHHHHHHHHh--cCCCcEEEEeee
Q 017726 101 DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV-HNETATGVTNNLSKVRKLLDE--YRHPALFLVDGV 177 (367)
Q Consensus 101 ~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~-~~~n~tG~~~~~~~i~~~~~~--~~~~~~vi~D~~ 177 (367)
.+++.+|++.+.||+.++| +|.|.+++++.++ +.+|.++++ .-+||||.+++-+.+.+++.- ...+.-|+.|.+
T Consensus 139 ai~E~~Giemi~VpM~~dG-PDmD~Ve~LV~~D--~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNA 215 (425)
T PF12897_consen 139 AITEHFGIEMIPVPMTEDG-PDMDMVEELVAED--PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNA 215 (425)
T ss_dssp HHHHHCT-EEEEEEEETTE-E-HHHHHHHTHTS--TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-T
T ss_pred HHHHhhCcEEEecCCCCCC-CCHHHHHHHHhcC--CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecC
Confidence 6799999999999999777 6999999999765 478888554 566999999998888888753 347899999999
Q ss_pred eccCcee--e------cc-------ccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhh
Q 017726 178 SSICAID--F------RM-------DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYN 242 (367)
Q Consensus 178 ~~~~~~~--~------~~-------~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
|..=++- . +. .+.+..++..|+||.-....|++++..+++-++.+.....
T Consensus 216 Y~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~--------------- 280 (425)
T PF12897_consen 216 YAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLS--------------- 280 (425)
T ss_dssp TTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHH---------------
T ss_pred ceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhc---------------
Confidence 8764441 1 11 1224568888999987667888999999998887764311
Q ss_pred cCCccCCCCcHHHHHHHHHHHHHHH-Hh-ChHHHHHH--------HHHHHHHHHHHHH-HcC-CccccCCCccCCCceEE
Q 017726 243 LGTFWPYTPSIQLLYGLRAALDLIF-EE-GLENVIER--------HRRLGKATRLAVE-AWG-LKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 243 ~~~~~~~~~~~~~~~al~~al~~~~-~~-g~~~~~~~--------~~~~~~~l~~~L~-~~g-~~~~~~~~~~~~~~~~~ 310 (367)
..+ . .+.-...+. -.+.+. .+ |+++.+++ .....+.|.+.|. ..| ..|..| .++++++
T Consensus 281 ~~t--I-gpdKvNQLR---Hvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P----~GGYFIs 350 (425)
T PF12897_consen 281 VQT--I-GPDKVNQLR---HVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKP----KGGYFIS 350 (425)
T ss_dssp HH---S----HHHHHH---HHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE-------SBSS-EE
T ss_pred Cce--e-CccHHHHHH---HHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCC----CCceEEE
Confidence 000 0 022111111 111221 12 22222222 2222333344444 333 366666 6788999
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEcc-CCC-CC----CCcEEEEeecC-CCCHHHHHHh
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGL-GLN-KV----AGKVFRIGHLG-HLNEVMFNFQ 362 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~-g~~-~~----~~~~iRi~~~~-~~~~~~~~~~ 362 (367)
+.+.++ .++.+.+..+ +.||.+.+ |.. |. .+..|||++.. ..++.+...+
T Consensus 351 ld~~~G-~AkrvV~lak-eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~ 407 (425)
T PF12897_consen 351 LDVLDG-TAKRVVELAK-EAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMD 407 (425)
T ss_dssp EEESTT--HHHHHHHHH-HTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHH
T ss_pred EecCCC-hHHHHHHHHH-HhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHH
Confidence 999765 5677777664 56999987 532 11 24679998643 3444444433
No 320
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.70 E-value=4.6e-15 Score=123.24 Aligned_cols=282 Identities=15% Similarity=0.114 Sum_probs=188.7
Q ss_pred HHHHHHHccCCCC--C----CCCcHHHH-HHHHHHHHHHHhcCCCCce-EEecCChhHHHHHHHHccCCCCCeEEEEeCC
Q 017726 22 DQVIRAMNRNNED--Y----RSPAVPAL-TKTLLEDIKKIFKTTSGTP-FLIPTTGTGAWESALTNTLSPGDRIISFLIG 93 (367)
Q Consensus 22 ~~v~~a~~~~~~~--~----~~~~~~~~-~~~~~~~la~~~~~~~~~~-v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~ 93 (367)
..|++++++.-.. | .+|++.+. .+.+.+-.|+.+|.+.+-. .-+ -|||+|+..++..++.|||+++.....
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~-isGTHAI~~aLfg~LRpgDell~i~G~ 116 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGAEAALVRPQI-ISGTHAIACALFGILRPGDELLYITGS 116 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhccccceeeeee-ecchhHHHHHHHhccCCCCeEEEecCC
Confidence 4678888774321 2 24555443 5667888899999986421 223 357999999999999999999876553
Q ss_pred cchHHH---------HHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEe----cCCCccccccHHHHH
Q 017726 94 QFSLLW---------IDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVH----NETATGVTNNLSKVR 160 (367)
Q Consensus 94 ~~~~~~---------~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~----~~n~tG~~~~~~~i~ 160 (367)
-+...- ...++..|++++.+++..++.+|.+.+...++ +++|+|.+.- ..-|+=.+.+++++.
T Consensus 117 PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~----~~tkli~IQRS~GY~~RpS~~I~eI~~~i 192 (416)
T COG4100 117 PYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS----DRTKLIGIQRSKGYAWRPSLSIAEIEEMI 192 (416)
T ss_pred cchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC----ccceEEEEEeccCcCCCCcccHHHHHHHH
Confidence 232211 11245578999999999999999999999999 5779997752 223444455788889
Q ss_pred HHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCC--cceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 161 KLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPT--GMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 161 ~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~--g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
++.|+.+.++++++|.||+-+.........|+|++.+|+-|.-+|.. -.||+.++.+++++..-....+...
T Consensus 193 ~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG------ 266 (416)
T COG4100 193 TFVKEINPNVIVFVDNCYGEFVEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIG------ 266 (416)
T ss_pred HHHHhcCCCEEEEEeccchhhhhccCccccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCcc------
Confidence 99998778999999999998777667777899999999999876541 1399999999988765332111000
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHIN 318 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (367)
-+.| .....+..+...+-+ -.++..+..+-+......|+++|+++.+...+.+...+..+++++...
T Consensus 267 --~e~G------at~~~l~~myqGlFl-----APhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eK 333 (416)
T COG4100 267 --REGG------ATLYSLREMYQGLFL-----APHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEK 333 (416)
T ss_pred --cccc------ccHHHHHHHHhhhcc-----chHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecCCHHH
Confidence 0111 111111111111111 234555566667777778888999887765555777677788864433
Q ss_pred HHHHHHHHH
Q 017726 319 SSEIVRRAW 327 (367)
Q Consensus 319 ~~~l~~~L~ 327 (367)
.-.||+.+.
T Consensus 334 mIaFcqaiQ 342 (416)
T COG4100 334 MIAFCQAIQ 342 (416)
T ss_pred HHHHHHHHh
Confidence 445666664
No 321
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=6.7e-14 Score=129.37 Aligned_cols=310 Identities=20% Similarity=0.180 Sum_probs=183.1
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
++.+.+++.++... + ......+...++-+++.+.+.....+.+.|++||++|+..++... .....+|+....+|
T Consensus 58 ~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~y 137 (425)
T PRK07495 58 HPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGF 137 (425)
T ss_pred CHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCc
Confidence 44556665554332 1 111223445667777777764322246999999999999988642 23345788888888
Q ss_pred chHHHHHHHH-------HhC-----CceEEEeCCCCC-CCC----HHHHHHHHhcc-CCCCccEEEEEecCCCccccc-c
Q 017726 95 FSLLWIDQQQ-------RLN-----FNVDVVESDWGE-GAK----LDVLASKLAAD-TAHTIKAICIVHNETATGVTN-N 155 (367)
Q Consensus 95 ~~~~~~~~~~-------~~g-----~~~~~v~~~~~~-~~d----~e~l~~~i~~~-~~~~~~lv~~~~~~n~tG~~~-~ 155 (367)
++.......- ..+ ..+..+|.+.+. ..+ ++++++.+.+. ..+++++|++......+|.+. |
T Consensus 138 HG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~ 217 (425)
T PRK07495 138 HGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAP 217 (425)
T ss_pred CCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCC
Confidence 8754211110 001 123344443211 122 44557666531 114678888887776678554 3
Q ss_pred ---HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCC
Q 017726 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS 227 (367)
Q Consensus 156 ---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~ 227 (367)
+++++++|++ +|+++|+|+++...... ........|+ .+.+|.+++...+|++++++++.+.+.....
T Consensus 218 ~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G~pigav~~~~~i~~~~~~~~~ 293 (425)
T PRK07495 218 AAFMKALRELCDQ--HGILLIADEVQTGFARTGKLFAMEHHEVAADL--TTMAKGLAGGFPLAAVTGRAEIMDAPGPGGL 293 (425)
T ss_pred HHHHHHHHHHHHH--cCCEEEEechhhcCCcCCCceeecccCCCCCE--EeehhhhcCCccceEEEEcHHHHhccCCCCc
Confidence 7889999999 99999999998633221 1111223455 4558988765557999999998776653210
Q ss_pred CceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCC
Q 017726 228 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFS 305 (367)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~ 305 (367)
+ ..+..+...+++..++++.+.+.+ ..++..++.+++++.|+++ .++.+..-. ..
T Consensus 294 ----------------~--~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--G~ 350 (425)
T PRK07495 294 ----------------G--GTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIR--GP 350 (425)
T ss_pred ----------------C--CCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeee--cC
Confidence 1 133466666677778888887654 4556777888888888775 233222111 12
Q ss_pred CceEEEEcCCCC----C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 306 DTVTAVIVPSHI----N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 306 ~~~~~~~~~~~~----~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.++++.+.+.. + ...+.+.+.+ .|+.+... .. .++.+|+.+....++++++
T Consensus 351 Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~-g~-~~~~~r~~Ppl~it~~~id 409 (425)
T PRK07495 351 GFMNAVEFNDADSGLPSAEFANRVRLKALE-KGLILLTC-GV-HGNVIRFLAPITIQDDVFA 409 (425)
T ss_pred ceEEEEEEecCCCCCccHHHHHHHHHHHHH-CCeEEeec-CC-CCCEEEEeCCCccCHHHHH
Confidence 456677662211 1 2346666665 59988642 11 2478999977776665444
No 322
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=9.4e-15 Score=124.59 Aligned_cols=323 Identities=16% Similarity=0.173 Sum_probs=209.5
Q ss_pred CcccccCCCCCChHHHHHHHccCCCC--------CCCC---cHHH-HHHHHHHHHHHHhcCCCCceE--EecCChhHHHH
Q 017726 9 KNHLFVPGPVHIPDQVIRAMNRNNED--------YRSP---AVPA-LTKTLLEDIKKIFKTTSGTPF--LIPTTGTGAWE 74 (367)
Q Consensus 9 ~~~~~~~~p~~~~~~v~~a~~~~~~~--------~~~~---~~~~-~~~~~~~~la~~~~~~~~~~v--~~~~ggt~al~ 74 (367)
+-+.++|.---++.+|++++-....+ .++| .+.+ +..=++++..+.|+++++.+- +-.=||+-|+.
T Consensus 41 ~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANf 120 (477)
T KOG2467|consen 41 RGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANF 120 (477)
T ss_pred cceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhh
Confidence 44566777777888899888764332 2223 2333 333356777788999865433 33347889999
Q ss_pred HHHHccCCCCCeEEEEeCCcchHH---HHHHHHHh-CCceE----EEeCC-CCCCCCHHHHHHHHhccCCCCccEEEEEe
Q 017726 75 SALTNTLSPGDRIISFLIGQFSLL---WIDQQQRL-NFNVD----VVESD-WGEGAKLDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 75 ~~~~~~~~~gd~vl~~~~~~~~~~---~~~~~~~~-g~~~~----~v~~~-~~~~~d~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
.+-.+++.|++++--.+.++.++. +..-.+.- ...+. ...++ ..+-+|.|.||+.... -|||+|+.-.
T Consensus 121 avYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~---frPk~iiaG~ 197 (477)
T KOG2467|consen 121 AVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATL---FRPKLIIAGT 197 (477)
T ss_pred HHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHh---cCCcEEEecc
Confidence 999999999999877666444432 11000110 11111 11223 3467899999988664 4789887643
Q ss_pred cCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC-----ceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHH
Q 017726 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC-----AIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (367)
Q Consensus 146 ~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~-----~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~ 220 (367)
+..-...|-++++++|++ .|+++++|.+|-.| ..+.+++ .+|+++.+.||.+.||+| |++..++...
T Consensus 198 --SaY~R~~DYaR~R~Iad~--~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPRg-~mIFyRkGvk- 269 (477)
T KOG2467|consen 198 --SAYSRLIDYARFRKIADK--VGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPRG-AMIFYRKGVK- 269 (477)
T ss_pred --ccchhhccHHHHHHHHHh--cCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCcc-eeEEEeccCC-
Confidence 234456789999999999 99999999998543 3344554 689999999999999997 8888776542
Q ss_pred HhccCCCCceeechHHHHH-----HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCc
Q 017726 221 ASKTAKSVRVFFDWKDYIK-----FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~ 295 (367)
...+........|+.+... .++ |+ |.-..+.++..||+.......++-.++..+|++.|.+.|.++|++
T Consensus 270 ~~~~k~g~~i~ydlE~kINfaVFP~lQ-GG-----PHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~ 343 (477)
T KOG2467|consen 270 SIKPKQGKEILYDLEDKINFAVFPGLQ-GG-----PHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYK 343 (477)
T ss_pred cCCCCCCCcceechhhhhhhhcccccc-CC-----CCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCce
Confidence 2221122222333322211 122 33 444455888999998887778888999999999999999999999
Q ss_pred cccCCCccCCCceEEEEc-CCCCCHHHHHHHHHhhCCeEEc----cC-CCCCCCcEEEEeecC
Q 017726 296 NCTQKEEWFSDTVTAVIV-PSHINSSEIVRRAWQRYNLSLG----LG-LNKVAGKVFRIGHLG 352 (367)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~~gv~v~----~g-~~~~~~~~iRi~~~~ 352 (367)
+++... .++++.+++ |.+++...+ ++.++..+|.+- +| ...+.++.+|||.-+
T Consensus 344 lvtgGT---DnHlvLvDLr~~G~dGarv-E~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPA 402 (477)
T KOG2467|consen 344 LVTGGT---DNHLVLVDLRPKGVDGARV-EKVLELCHIALNKNTVPGDKSALSPGGIRIGTPA 402 (477)
T ss_pred EecCCc---cceEEEEeccccCCchHHH-HHHHHHhhhhhcCCcCCCCccccCCCceeccchh
Confidence 988643 344555555 457776544 444455566653 33 224556779998744
No 323
>PRK06541 hypothetical protein; Provisional
Probab=99.69 E-value=7.5e-14 Score=130.17 Aligned_cols=291 Identities=14% Similarity=0.061 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C--CCCeEEEEeCCcchHHHHHHHHHhC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S--PGDRIISFLIGQFSLLWIDQQQRLN------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~--~gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (367)
+...++.+++.++...+ .+.+.|++||++|++.++.... . ...+|+....+|++....... ..|
T Consensus 95 ~~~~~la~~l~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s-~~~~~~~~~ 172 (460)
T PRK06541 95 PPAIELAERLAALAPGD-LNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALA-ITGLPAFKA 172 (460)
T ss_pred HHHHHHHHHHHHhCCCC-cCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhc-CcCChhhcc
Confidence 44567777777775432 2469999999999999886321 1 246788888888875421111 111
Q ss_pred ------CceEEEeCCCCCC-----CC--------HHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHH
Q 017726 108 ------FNVDVVESDWGEG-----AK--------LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (367)
Q Consensus 108 ------~~~~~v~~~~~~~-----~d--------~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~ 164 (367)
..+..++.+.... -+ ++.+++.++.....++.+|++....++.|.+.+ +++++++|+
T Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~ 252 (460)
T PRK06541 173 PFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICD 252 (460)
T ss_pred ccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 1123333321110 11 366777776422135677777777899999987 899999999
Q ss_pred hcCCCcEEEEeeee-ccCcee----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 165 EYRHPALFLVDGVS-SICAID----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 165 ~~~~~~~vi~D~~~-~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+ +|+++|+||++ ++|... ........|+++ .+|.+++.. .+|.+++++++.+.+.... ..+..
T Consensus 253 ~--~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~-~~~~~------ 321 (460)
T PRK06541 253 R--YDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGP-TMFLH------ 321 (460)
T ss_pred H--cCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccCCccceeEEEEcHHHHHHhhcCC-Ccccc------
Confidence 9 99999999998 443211 111122468776 589887542 4799999999987765321 11100
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCC-
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSH- 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 316 (367)
.+ .+..+...+++..++++.+.+.+ ..++..++.++|.+.|+++ ...++..-. ..+.++.+.+.++
T Consensus 322 ----~~---T~~gnp~~~aaala~l~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~vr--g~Gl~~~ie~~~~~ 389 (460)
T PRK06541 322 ----GY---TFGGHPVSAAVALANLDIFEREG---LLDHVRDNEPAFRATLEKLLDLPIVGDVR--GDGYFYGIELVKDK 389 (460)
T ss_pred ----CC---CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEEE--ecceEEEEEEecCc
Confidence 11 23355555666677777776654 4568888999999999886 433322100 1233444544211
Q ss_pred -----CC-------H-HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 -----IN-------S-SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 -----~~-------~-~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+ . ..+.+.|.+ +||.+.+.. .....+|+++....+++|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~--~g~~~lrl~Ppl~~t~~~id 443 (460)
T PRK06541 390 ATKETFTDDESERLLRGFLSPALFE-AGLYCRADD--RGDPVVQLAPPLISGQEEFD 443 (460)
T ss_pred ccccCCcchhhhhhHHHHHHHHHHh-CCeEEEecC--CCCCEEEEECCCCCCHHHHH
Confidence 00 0 245567765 499987621 12367999988767665544
No 324
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=4.7e-14 Score=129.69 Aligned_cols=303 Identities=16% Similarity=0.102 Sum_probs=178.1
Q ss_pred hHHHHHHHccCCCC--CCCC-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C--C-CCeEE
Q 017726 21 PDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S--P-GDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~-~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~--~-gd~vl 88 (367)
++.+.+++.++... +... ...+...++.++|.+.... .+.+.|++||++|++.++.... . + ..+|+
T Consensus 58 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii 135 (408)
T PRK04612 58 DPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIV 135 (408)
T ss_pred CHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEE
Confidence 45566666654332 1111 1223445666767666532 2469999999999999886421 1 1 23688
Q ss_pred EEeCCcchHHHHHHHHHhCCceEE---EeCCCC----CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-----H
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDV---VESDWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-----L 156 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~---v~~~~~----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~-----~ 156 (367)
....+|++....... ..+..... -+...+ ...|++.+++.+.. .++. .++..|.+++|-+.+ +
T Consensus 136 ~~~~~yHG~t~~~~s-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~a-avi~eP~~~~gg~~~~~~~~l 210 (408)
T PRK04612 136 TFRGSFHGRTLAAVT-ATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG---GDVA-AVMLEPIQGEGGVMPAAPGFL 210 (408)
T ss_pred EECCCcCCccHHHHH-hcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC---CCEE-EEEECCccCCCCCcCCCHHHH
Confidence 888888886422111 11111000 011111 01278889888853 2344 445555666665543 7
Q ss_pred HHHHHHHHhcCCCcEEEEeeeeccCceee---ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 157 SKVRKLLDEYRHPALFLVDGVSSICAIDF---RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 157 ~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
++|+++|++ +|+++|+|++++.....- .....+....+.+.+|.+++...+|++++++++.+.+.....
T Consensus 211 ~~l~~l~~~--~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~------ 282 (408)
T PRK04612 211 ARVRALCDQ--HDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAH------ 282 (408)
T ss_pred HHHHHHHHH--cCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCc------
Confidence 889999999 999999999986432211 111123344455668999755457998888887766643110
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEE
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAV 311 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~ 311 (367)
.. .++.+...+.+..++++.+.++ ++.++.+++.+++.+.|+++ .+.++..-. -.+.++.+
T Consensus 283 ---------~~---t~~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vr--g~Gl~~~i 345 (408)
T PRK04612 283 ---------GT---TFGGNPLAAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVR--GRGLMLGA 345 (408)
T ss_pred ---------CC---CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeee--ccceEEEE
Confidence 11 2345666777777788888765 45667888888888888875 233332211 12345555
Q ss_pred EcCCC--CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 312 IVPSH--INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 312 ~~~~~--~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+.+. ....++++.+.+ +||.+.+. ..+.+|+.+....+++|+.
T Consensus 346 ~~~~~~~~~a~~i~~~l~~-~Gvlv~~~----g~~~lRl~Ppl~it~eeid 391 (408)
T PRK04612 346 VLAPAHAGQAGAILDLAAE-HGLLLLQA----GPDVLRFVPALNLTDAELA 391 (408)
T ss_pred EecCchhhHHHHHHHHHHH-CCeEEeeC----CCCEEEEcCCccCCHHHHH
Confidence 54221 124567787765 59998652 2367999987777765543
No 325
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.69 E-value=3.1e-14 Score=126.39 Aligned_cols=308 Identities=17% Similarity=0.132 Sum_probs=192.7
Q ss_pred hHHHHHHHccCCCCCCCCc-HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNEDYRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~ 97 (367)
++.|.+++.+......++. +.+..-++-+.+.+.+..-+ .|-|++|||+|...+++.. ....|+|+.....|++.
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~~e--~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~ 148 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPSIE--KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGH 148 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCccc--EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCC
Confidence 4556666666544333222 23555577777887776543 5999999999999988642 34567888888888886
Q ss_pred H-HHHHHHHhCC-----------------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----
Q 017726 98 L-WIDQQQRLNF-----------------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---- 155 (367)
Q Consensus 98 ~-~~~~~~~~g~-----------------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---- 155 (367)
. +.-.-...|. ....+|.+ |++.+++++++.+ ++..+|++.......|.+.|
T Consensus 149 ~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g-~~IAaVIvEPv~gn~g~i~p~~~F 222 (432)
T COG0001 149 SDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEEAFEEYG-DDIAAVIVEPVAGNMGVVPPEPGF 222 (432)
T ss_pred ccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHHHHHHcC-CcEEEEEeccccCCCCCCCCCHHH
Confidence 4 2111000111 12233333 8999999999875 57889999988888999887
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCceee----ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAIDF----RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~----~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
++.++++|++ +|+++|.||....+..+. .......|+. +..|.++|...+|.+.++.++.+++.+.. .
T Consensus 223 l~~Lr~lt~e--~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlt--tlGKiIGGGlP~ga~gGr~eiM~~~~p~g--~-- 294 (432)
T COG0001 223 LEGLRELTEE--HGALLIFDEVITGFRVALGGAQGYYGVEPDLT--TLGKIIGGGLPIGAFGGRAEIMEQLAPLG--P-- 294 (432)
T ss_pred HHHHHHHHHH--cCcEEEEecchhhcccCCcccccccCcCcchh--hhhhhhcCCcceeeeccHHHHHhhhCCCC--C--
Confidence 7789999999 999999999976443332 1112234554 45899988777899999999999777542 1
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-C-hHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceE
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-G-LENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 309 (367)
.++.|| ++-|...++|-.++++.+.+. + .+.+.+...++++-+.+.+++.|+++... +.+.++
T Consensus 295 --------vyqaGT---~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~----~~gsm~ 359 (432)
T COG0001 295 --------VYQAGT---LSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVN----RVGSMF 359 (432)
T ss_pred --------ccccCC---CCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe----eecceE
Confidence 123454 346666777778888887763 4 44444444444555555555557777665 333344
Q ss_pred EEEcCC--CC--------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhh
Q 017726 310 AVIVPS--HI--------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLL 364 (367)
Q Consensus 310 ~~~~~~--~~--------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l 364 (367)
.+.+.+ .. + ...+...|.++ ||++.|+.. ...=+|.....++.|....++
T Consensus 360 ~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~----ea~flS~ahte~di~~~~~a~ 422 (432)
T COG0001 360 GIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQF----EAGFLSTAHTEEDIDRTLEAA 422 (432)
T ss_pred EEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccc----cceeeecccCHHHHHHHHHHH
Confidence 444422 11 1 12344566655 888876532 123344444445544444443
No 326
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.8e-13 Score=127.56 Aligned_cols=307 Identities=13% Similarity=0.101 Sum_probs=178.3
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
.+++.+++.++... + ......+...++.+++.+.+.....+.+.|++||++|++.++... ....++|+....+|
T Consensus 74 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~y 153 (443)
T PRK06058 74 APRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAY 153 (443)
T ss_pred CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCc
Confidence 44555555554321 1 111123455677777777765332236899999999999988731 23447888888888
Q ss_pred chHHHHHHHH-------HhCC-----ceEEEeCCCCCC------CC--------HHHHHHHHhccCCCCccEEEEEecCC
Q 017726 95 FSLLWIDQQQ-------RLNF-----NVDVVESDWGEG------AK--------LDVLASKLAADTAHTIKAICIVHNET 148 (367)
Q Consensus 95 ~~~~~~~~~~-------~~g~-----~~~~v~~~~~~~------~d--------~e~l~~~i~~~~~~~~~lv~~~~~~n 148 (367)
++........ ..+. .+..++.....+ .+ .+.+++.+. + +++.+|++...+.
T Consensus 154 HG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~-~~iAavi~EPi~g 230 (443)
T PRK06058 154 HGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--A-DNLAAVIIEPIQG 230 (443)
T ss_pred CcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--C-CceEEEEECCccC
Confidence 8864211110 0111 122233221111 00 122223222 1 4677888776665
Q ss_pred Ccccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHH
Q 017726 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKAL 219 (367)
Q Consensus 149 ~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~ 219 (367)
..|.+.| +++|+++|++ +|+++|.||++...... ........|+++. .|.+++...+|.+++++++.
T Consensus 231 ~gG~~~p~~~yl~~lr~lc~~--~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~G~Pi~av~~~~~i~ 306 (443)
T PRK06058 231 EGGFIVPAEGFLPALLEWCRE--NGVVFIADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAGGLPLSAVTGRAEIM 306 (443)
T ss_pred CCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEE--cccccCCCccEEEEEcHHHH
Confidence 5666664 8899999999 99999999998643221 1222234688877 59987655579999999987
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC 297 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 297 (367)
+.+..... +. .+..+...+++..++++.+.+++ +.++..++.+++.+.|+++ ...++
T Consensus 307 ~~~~~~~~----------------~~--T~~gnpl~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i 365 (443)
T PRK06058 307 DAPHPGGL----------------GG--TYGGNPVACAAALAAIETIEEDD---LVARARQIEALMTDRLRALAAEDDRI 365 (443)
T ss_pred hhccCCCC----------------CC--CCCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCcE
Confidence 76653211 11 33466666777888888877764 4556777788888888875 23432
Q ss_pred cCCCccCCCceEEEEcCCC---C-C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 298 TQKEEWFSDTVTAVIVPSH---I-N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~---~-~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..-. -.+.++.+.+.+. . + ...+.+.+.+ +||.+.++... ++.+|+.+....+++++.
T Consensus 366 ~~vr--g~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~-~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~ 430 (443)
T PRK06058 366 GDVR--GRGAMIAIELVKPGTTEPDAELTKALAAAAHA-AGVIVLTCGTY--GNVIRLLPPLVIGDELLR 430 (443)
T ss_pred Eeee--ccceEEEEEEecCCCCCCcHHHHHHHHHHHHH-CCeEEeccCCC--CCEEEEECCCccCHHHHH
Confidence 2111 1233444444111 1 1 2346666655 59999764221 468999766555554433
No 327
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1.2e-13 Score=128.45 Aligned_cols=307 Identities=14% Similarity=0.100 Sum_probs=182.9
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
++++.+++.++... + ......+...++.++|++.+.....+.+.|++||++|++.++... .....+|+....+|
T Consensus 60 ~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~Y 139 (445)
T PRK08593 60 PPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAY 139 (445)
T ss_pred CHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCc
Confidence 45566666554322 1 111223556678888888774332246999999999999988742 22345688888888
Q ss_pred chHHHHHHHHHhC-------------CceEEEeCCCCCC-----CC-------HHHHHHHHhcc-CCCCccEEEEEecCC
Q 017726 95 FSLLWIDQQQRLN-------------FNVDVVESDWGEG-----AK-------LDVLASKLAAD-TAHTIKAICIVHNET 148 (367)
Q Consensus 95 ~~~~~~~~~~~~g-------------~~~~~v~~~~~~~-----~d-------~e~l~~~i~~~-~~~~~~lv~~~~~~n 148 (367)
++....... ..+ ..+..+|.+.... .+ ++++++.+.+. ..+++.+|++.....
T Consensus 140 HG~t~~als-~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g 218 (445)
T PRK08593 140 HGSTYGSLS-MSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQG 218 (445)
T ss_pred CCCcHHHHh-hcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccC
Confidence 885421111 111 1133344332111 11 13455444321 114678999999888
Q ss_pred Ccccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHH
Q 017726 149 ATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKAL 219 (367)
Q Consensus 149 ~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~ 219 (367)
..|.+.| +++++++|++ +|+++|+||++...... ........|+++ .+|.+++...+|++++++++.
T Consensus 219 ~gG~~~~~~~yl~~l~~lc~~--~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t--~gK~l~~G~p~gav~~~~~i~ 294 (445)
T PRK08593 219 DGGLLEPVPGYFEALYKFCRE--HGILFAVDDIQQGLGRTGKWSSISHFNITPDLMS--FGKSLAGGMPMSAIVGRKEIM 294 (445)
T ss_pred CCCCcCCCHHHHHHHHHHHHH--cCCEEEEechhhCCCcCchHHHHHhcCCCCCEee--ecccccCCcccEEEEEcHHHH
Confidence 8898876 8899999999 99999999998532111 111122467665 578886544479999999988
Q ss_pred HHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccc
Q 017726 220 EASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC 297 (367)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~ 297 (367)
+.+..... . +.+..+...+++..++++.+++++ +.++..++.++|++.|+++ ..+++
T Consensus 295 ~~~~~~~~----------------~--~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v 353 (445)
T PRK08593 295 ESLEAPAH----------------L--FTTGANPVSCAAALATIDMIEDES---LLQRSAEKGEYARKRFDQWVSKYNFV 353 (445)
T ss_pred hhhccCCC----------------C--CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 77642110 0 123355666777778888887753 4567777888888888774 23333
Q ss_pred cCCCccCCCceEEEEcCCC----C----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 298 TQKEEWFSDTVTAVIVPSH----I----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~----~----~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..-. -.+.++.+.+... . ....+++.+.+ +||.+.+. .++.+|+.+....+++|+.
T Consensus 354 ~~vr--G~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~-~Gv~~~~~----~~~~lr~~p~l~~t~~~id 417 (445)
T PRK08593 354 GDVR--GYGLSIGIDIVSDKKLKTRDNEAALKICNYCFE-HGVVIIAV----AGNVLRFQPPLVITYEQLD 417 (445)
T ss_pred EEEe--ccceEEEEEEecCCCcCCCcHHHHHHHHHHHHH-CCeEEecc----CCCEEEEECCCccCHHHHH
Confidence 2111 1222333333111 1 13457777765 49988642 2467999887777766554
No 328
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.68 E-value=1.9e-14 Score=133.61 Aligned_cols=308 Identities=15% Similarity=0.084 Sum_probs=181.2
Q ss_pred hHHHHHHHccCCCC-CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--CCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNED-YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--SPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--~~gd~vl~~~~~~~~~ 97 (367)
++++.+++.+.... ...+.......++.+++.+++.- .+.+.+++||++|+..++.... ..+++|+..++.|++.
T Consensus 68 ~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~ 145 (426)
T PRK00062 68 HPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVPS--IEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGH 145 (426)
T ss_pred CHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCC--CCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCc
Confidence 44555555554332 11122335556888888877631 2358999999999999887632 3467899999988886
Q ss_pred HHHHHHH-H-----hCCc-----eE-----EEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 98 LWIDQQQ-R-----LNFN-----VD-----VVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 98 ~~~~~~~-~-----~g~~-----~~-----~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
....... . .+.. .. .+..+ ..|++++++.+.+.. +++++|++......+|.+.+ ++
T Consensus 146 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~~~~-~~~aaiivEpv~~~~G~~~~~~~~l~ 221 (426)
T PRK00062 146 ADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFEEYG-DEIAAVIVEPVAGNMGVVPPKPGFLE 221 (426)
T ss_pred hhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHHhCC-CcEEEEEEeCCcCCCCCcCCCHHHHH
Confidence 4111111 0 0100 00 01111 127899999887543 46788899888888999987 89
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCcee----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAID----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+|+++|++ ||+++|+|++|...... ........|+ .+.+|.+++...+|++++++++++.+.... ..+.
T Consensus 222 ~l~~l~~~--~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~--~~~~- 294 (426)
T PRK00062 222 GLRELCDE--HGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTLGKIIGGGLPVGAFGGRREIMEQLAPLG--PVYQ- 294 (426)
T ss_pred HHHHHHHH--cCCEEEEeechhccccCCccHHHHhCCCcch--HhhhhHhhCCCcceeeeEHHHHHHhhccCC--Ccee-
Confidence 99999999 99999999998733110 1111123465 456799975434688899999888775211 0000
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH----cCCccccCCCccCCCceE
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA----WGLKNCTQKEEWFSDTVT 309 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~ 309 (367)
+ ..+..+...+++..++++.+.+. +..++.+++.+++++.|++ .++..... ..+.++
T Consensus 295 ----------~--~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vr----g~G~~~ 355 (426)
T PRK00062 295 ----------A--GTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTVN----RVGSMF 355 (426)
T ss_pred ----------c--ccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEE----EecceE
Confidence 1 12345666667777788877664 3455666666666666654 34332111 123344
Q ss_pred EEEcCC-CC---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 310 AVIVPS-HI---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 310 ~~~~~~-~~---------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
.+.+.+ .. + ...+.+.|.++ ||.+.+.. .+.+|+......++.|....+|.
T Consensus 356 ~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l~ 419 (426)
T PRK00062 356 GLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAAR 419 (426)
T ss_pred EEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC----cCceeeeccCCHHHHHHHHHHHH
Confidence 444421 11 1 24677788654 99987632 13466654334444455555544
No 329
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.67 E-value=5.6e-14 Score=130.69 Aligned_cols=310 Identities=15% Similarity=0.070 Sum_probs=189.5
Q ss_pred hHHHHHHHccCCCC---CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---CC-C-CCeEEEEeC
Q 017726 21 PDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---LS-P-GDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~~-~-gd~vl~~~~ 92 (367)
++++.+++.++... ...+...+...++.++|.++..... +.+.|++||++|+..++... .. + ..+|+....
T Consensus 100 ~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~ 178 (459)
T PRK11522 100 NPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSG 178 (459)
T ss_pred CHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecC
Confidence 45666666664332 1112224556677777777764322 35899999999999988642 11 2 346888888
Q ss_pred CcchHHHHHHHHHhCCceEE---EeCCCCC----CCCHHHHHHHHhcc--CCCCccEEEEEecCCCcccccc----HHHH
Q 017726 93 GQFSLLWIDQQQRLNFNVDV---VESDWGE----GAKLDVLASKLAAD--TAHTIKAICIVHNETATGVTNN----LSKV 159 (367)
Q Consensus 93 ~~~~~~~~~~~~~~g~~~~~---v~~~~~~----~~d~e~l~~~i~~~--~~~~~~lv~~~~~~n~tG~~~~----~~~i 159 (367)
+|++........ .+-.... .+..++. ..|.+++++++++. ..+++.+|++.......|.+.| ++++
T Consensus 179 ~yHG~t~~~ls~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~l 257 (459)
T PRK11522 179 AFHGKSLGALSA-TAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAV 257 (459)
T ss_pred CCCCCcHHHhhh-cCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHH
Confidence 888853211111 1111000 1111110 12678888887631 1135678899988888898887 8999
Q ss_pred HHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeec
Q 017726 160 RKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+++|++ +|+++|+||++..... .+.......|+++. +|.+++. ..+|.+++++++.+.+... .+..
T Consensus 258 r~lc~~--~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~Pigav~~~~~i~~~~~~~---~~~~- 329 (459)
T PRK11522 258 RKLCDE--FGALLILDEVQTGMGRTGKMFACEHENVQPDILCL--AKALGGGVMPIGATIATEEVFSVLFDN---PFLH- 329 (459)
T ss_pred HHHHHH--cCCEEEeccceecCCccchhhhhhccCCCCCEEEe--chhhhCCCccceeEEEcHHHHHHhccC---Cccc-
Confidence 999999 9999999999853211 11222234687744 7998764 2478888998887655321 0000
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCCceEE
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTA 310 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~ 310 (367)
++ .+..+...+++..++++.+.+++ ..++..++.++|++.|+++ .++ ++..-. -.+.++.
T Consensus 330 ----------~~--T~~gnp~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~Vr--G~Gl~~g 392 (459)
T PRK11522 330 ----------TT--TFGGNPLACAAALATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLVQEAR--GKGMLMA 392 (459)
T ss_pred ----------CC--CCCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEE--eceeEEE
Confidence 11 23346666677777888887753 5668888899999999886 343 222111 1234566
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.+.+......+.+.|.+ +||.+.+... .+..+|+.+....+++|+.
T Consensus 393 iel~~~~~~~~i~~~l~~-~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id 439 (459)
T PRK11522 393 IEFVDNEIGYNFASEMFR-QRVLVAGTLN--NAKTIRIEPPLTLTIEQCE 439 (459)
T ss_pred EEecCchHHHHHHHHHHH-CCeEEEecCC--CCCEEEEECCccCCHHHHH
Confidence 666332234578888876 4999875321 2467999887777665444
No 330
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.67 E-value=1.4e-13 Score=127.71 Aligned_cols=308 Identities=16% Similarity=0.147 Sum_probs=180.0
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCC--CceEEe-cCChhHHHHHHHHcc--CCCCCeEEEEe
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTS--GTPFLI-PTTGTGAWESALTNT--LSPGDRIISFL 91 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~--~~~v~~-~~ggt~al~~~~~~~--~~~gd~vl~~~ 91 (367)
++.+.+++.++... +..........++.+++.+.+..+. .+.+.| ++||++|++.++... .....+|+...
T Consensus 57 ~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~ 136 (425)
T PRK09264 57 NPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFT 136 (425)
T ss_pred CHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEC
Confidence 45566666553321 1111123445667777777653321 224656 589999999988642 23345788888
Q ss_pred CCcchHHHHHHHH------H--hC---CceEEEeCCCCC---CCCHHHHHHHHhccC--CCCccEEEEEecCCCccccc-
Q 017726 92 IGQFSLLWIDQQQ------R--LN---FNVDVVESDWGE---GAKLDVLASKLAADT--AHTIKAICIVHNETATGVTN- 154 (367)
Q Consensus 92 ~~~~~~~~~~~~~------~--~g---~~~~~v~~~~~~---~~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~- 154 (367)
.+|++........ . .+ ..+..+|.+... .-|++++++.+.+.. .+++.+|++.......|.+.
T Consensus 137 ~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~ 216 (425)
T PRK09264 137 NGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVA 216 (425)
T ss_pred CccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCC
Confidence 8888854211111 0 11 123445543211 126778888886531 13567888888888788765
Q ss_pred ---cHHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccC-CCcceeeeeCHHHHHHhccC
Q 017726 155 ---NLSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSL-PTGMGIVCASPKALEASKTA 225 (367)
Q Consensus 155 ---~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g-~~g~g~~~~~~~~~~~~~~~ 225 (367)
.+++|+++|++ ||+++|+|++++.... .........|++++ +|.+++ ...+|++++++++ ..+...
T Consensus 217 ~~~~l~~l~~lc~~--~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~~~~i-~~~~~~ 291 (425)
T PRK09264 217 SAEWLQRLAKLCRK--HDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLIKPEL-DVWKPG 291 (425)
T ss_pred CHHHHHHHHHHHHH--cCcEEEEechhhCCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEEchhh-hccCCC
Confidence 38899999999 9999999999863221 12222345687766 698864 3336999998875 333211
Q ss_pred CCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHH-HHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccc-cCCC
Q 017726 226 KSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAAL-DLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNC-TQKE 301 (367)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al-~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~-~~~~ 301 (367)
. ..+ .++.+...+++..+++ ..+.+. +..++..++.+++.+.|+++ .++.. ..-.
T Consensus 292 ~---------------~~~---T~~gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr 350 (425)
T PRK09264 292 E---------------HNG---TFRGNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERLEEIAAKYPGLGAEVR 350 (425)
T ss_pred c---------------cCC---CCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHHhCCCceecce
Confidence 0 112 2334555556666677 343332 45667778888888888774 23321 1111
Q ss_pred ccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 302 EWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
..+.++++.+++......+++.+.++ ||.+.+.-. .+..||+++....+++++
T Consensus 351 --g~Gl~~~i~l~~~~~~~~l~~~~~~~-Gv~~~~~~~--~~~~lr~~p~l~~t~~ei 403 (425)
T PRK09264 351 --GRGMMQGIDFGDGELAGKIAAEAFEN-GLIIETSGP--EDEVVKLLPPLTIDEEEL 403 (425)
T ss_pred --ecccEEEEEecChHHHHHHHHHHHHC-CCEEeccCC--CCCEEEEeCCCCCCHHHH
Confidence 23456677774333355788888655 999875321 236799987655555443
No 331
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.67 E-value=1.3e-13 Score=127.65 Aligned_cols=293 Identities=12% Similarity=0.075 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEEEEeCCcchHHHHHHHHHhCC-----
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRIISFLIGQFSLLWIDQQQRLNF----- 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl~~~~~~~~~~~~~~~~~~g~----- 108 (367)
....++.+.+++++... -+.+.++++|++|+..++.... .+ ..+|+....+|++......+ ..+.
T Consensus 88 ~~~~~la~~l~~~~~~~-~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s-~~~~~~~~~ 165 (427)
T TIGR00508 88 KPAIELCQKLVKMTPNA-LDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMS-VCDPENSMH 165 (427)
T ss_pred HHHHHHHHHHHhhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhc-ccCCccccc
Confidence 44567777777776432 2469999999999998886422 12 35788888888886421111 1111
Q ss_pred --------ceEEEeCCCC-C-----CCCHHHHHHHHhccCCCCccEEEEEec-CCCccccc----cHHHHHHHHHhcCCC
Q 017726 109 --------NVDVVESDWG-E-----GAKLDVLASKLAADTAHTIKAICIVHN-ETATGVTN----NLSKVRKLLDEYRHP 169 (367)
Q Consensus 109 --------~~~~v~~~~~-~-----~~d~e~l~~~i~~~~~~~~~lv~~~~~-~n~tG~~~----~~~~i~~~~~~~~~~ 169 (367)
....++.+.. . .-|++++++++.+.. +++.+|++... ....|... .+++++++|++ +|
T Consensus 166 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~-~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~--~~ 242 (427)
T TIGR00508 166 SLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHS-DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQ--YD 242 (427)
T ss_pred ccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcC-CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH--cC
Confidence 1112222111 0 114677788886543 45677777765 55556544 48889999999 99
Q ss_pred cEEEEeeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 170 ALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 170 ~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
+++|+|+++..... .........|+++ .+|.++|. ..++.++.++++.+.+.......+..
T Consensus 243 ~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~----------- 309 (427)
T TIGR00508 243 ILLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMH----------- 309 (427)
T ss_pred CEEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcCcccceEEEEcHHHHHHHhcCCCCcccc-----------
Confidence 99999999843211 1112223578776 48988654 23688889999887775321111000
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcC-CccccCCCccCCCceEEEEcCCCCCHHHH
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-LKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (367)
+. .+..+...+++..++++.+.+.. ..++.+++.++|++.|++++ ...... ..-.+.++.+.+.+..+...+
T Consensus 310 ~~--T~~g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~--vrg~G~~~~i~~~~~~~~~~~ 382 (427)
T TIGR00508 310 GP--TFMGNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLRKNPVVKD--VRVLGAIGVVEMYKPVNVEEL 382 (427)
T ss_pred CC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCEEe--EeccccEEEEEECCccCHHHH
Confidence 11 22356667777888888887654 35688889999999998874 222221 001234566666433456788
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH--HHhhhh
Q 017726 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF--NFQLLF 365 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~--~~~~l~ 365 (367)
.+.|.++ ||.+.+. +..+|+++....+++|+ ...+|+
T Consensus 383 ~~~l~~~-Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~ 421 (427)
T TIGR00508 383 QKKFVEQ-GVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALI 421 (427)
T ss_pred HHHHHHC-CeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 8888765 9998642 24699987755555444 344443
No 332
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.67 E-value=1.7e-13 Score=128.06 Aligned_cols=307 Identities=18% Similarity=0.178 Sum_probs=173.2
Q ss_pred hHHHHHHHccCCCC--CCC--CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED--YRS--PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~--~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
.+.+.+++.++... +.. ....+...++.+.|.+++.....+.+.|++||++|++.++... .....+|+....+|
T Consensus 72 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~y 151 (451)
T PRK06918 72 HPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGF 151 (451)
T ss_pred CHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 44555555554322 111 1123556678788887775332246999999999999988642 23345788888888
Q ss_pred chHHHHHHHHHhC-------------CceEEEeCCCCC----CCC--------HHHHHHHHhc--cCCCCccEEEEEecC
Q 017726 95 FSLLWIDQQQRLN-------------FNVDVVESDWGE----GAK--------LDVLASKLAA--DTAHTIKAICIVHNE 147 (367)
Q Consensus 95 ~~~~~~~~~~~~g-------------~~~~~v~~~~~~----~~d--------~e~l~~~i~~--~~~~~~~lv~~~~~~ 147 (367)
++....... ..+ ..+..+|.+... ... .+.+++.+.. .. +++.+|++...+
T Consensus 152 HG~t~~~ls-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iAavi~EPi~ 229 (451)
T PRK06918 152 HGRTLMTMT-MTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAP-ETIAAVVMEPVQ 229 (451)
T ss_pred Cccchhhhh-hcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCC-CceEEEEECccc
Confidence 886421111 111 112333332110 110 1234443321 11 356777777666
Q ss_pred CCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce---eecccccc--ceEEEecCCCcccCCCcceeeeeCHHH
Q 017726 148 TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI---DFRMDEWG--IDVALTGSQKALSLPTGMGIVCASPKA 218 (367)
Q Consensus 148 n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~---~~~~~~~~--~d~~~~s~~K~~~g~~g~g~~~~~~~~ 218 (367)
...|.++| +++|.++|++ +|+++|+|+.+..... .+.....+ .|++ +.+|.+++...+|++++++++
T Consensus 230 g~gG~~~~~~~~l~~l~~l~~~--~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~~G~pig~v~~~~~i 305 (451)
T PRK06918 230 GEGGFIVPSKKFVQEVRNICSE--HGILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLGAGVPISGVIGRKEI 305 (451)
T ss_pred CCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhhcCCCccEEEEEcHHH
Confidence 55676664 7789999999 9999999999864322 12222222 6755 678999765557999999998
Q ss_pred HHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCcc
Q 017726 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKN 296 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~ 296 (367)
.+.+..... +. .+..+...+++..++++.+.+.++. ++.++..+++.+.|+++ ....
T Consensus 306 ~~~~~~~~~----------------~~--T~~g~~l~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~ 364 (451)
T PRK06918 306 MDESAPGEL----------------GG--TYAGSPLGCAAALAVLDIIEKENLN---DRAIELGKVVMNRFEEMKNKYNC 364 (451)
T ss_pred HhccCCCCc----------------Cc--CCCcCHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCC
Confidence 877653211 11 2345666667777788877665443 34555667777777664 3332
Q ss_pred ccCCCccCCCceEEEEcC-CC---CC----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 297 CTQKEEWFSDTVTAVIVP-SH---IN----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~-~~---~~----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
...-.. .+. ++.+.+. +. .+ ...+.+.+.+ +||.+.++... ++++|+++....+++++
T Consensus 365 ~~~vrg-~G~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~Gvlv~~~~~~--~~~lrl~p~l~~t~~~i 430 (451)
T PRK06918 365 IGDVRG-LGA-MCAFELVQDRKTKEPDKTLTANICKEANK-RGLLLLSAGTY--GNVIRVLMPLVITDEQL 430 (451)
T ss_pred ceeecc-cee-EEEEEEccCCCcCCCcHHHHHHHHHHHHH-CCeEEeecCCC--CCEEEEECCCccCHHHH
Confidence 211111 232 3333321 11 11 3345566654 59999875321 46899987554555443
No 333
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.67 E-value=1.9e-13 Score=126.95 Aligned_cols=314 Identities=18% Similarity=0.177 Sum_probs=185.5
Q ss_pred ChHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeE
Q 017726 20 IPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRI 87 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~v 87 (367)
-.+.+.+++.++... .......+...++.+++.+++... -+.+.|++||++|++.++.... . + ..+|
T Consensus 63 ~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~i 141 (442)
T PRK13360 63 GRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGG-LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRL 141 (442)
T ss_pred CCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 345566666554321 111112344557777788776322 2358999999999999886421 1 2 3578
Q ss_pred EEEeCCcchHHHHHHH------HHh--C---CceEEEeCCCC---CCC----------CHHHHHHHHhccCCCCccEEEE
Q 017726 88 ISFLIGQFSLLWIDQQ------QRL--N---FNVDVVESDWG---EGA----------KLDVLASKLAADTAHTIKAICI 143 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~------~~~--g---~~~~~v~~~~~---~~~----------d~e~l~~~i~~~~~~~~~lv~~ 143 (367)
+....+|++....... ... + ..+..+|.... ..+ .++++++++.....+++.+|++
T Consensus 142 i~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aaviv 221 (442)
T PRK13360 142 IGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIV 221 (442)
T ss_pred EEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8888888885321110 000 1 12333443311 001 1457788876432246788899
Q ss_pred EecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeec-cCce----eeccccccceEEEecCCCcccCC-Ccceeee
Q 017726 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI----DFRMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (367)
Q Consensus 144 ~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~-~~~~----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~ 213 (367)
.......|.+.| +++|+++|++ +|+++|+||++. +|.. .........|++++ +|.+++. ..+|.++
T Consensus 222 Epi~g~~G~~~~~~~fl~~lr~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~--gK~l~gG~~P~gav~ 297 (442)
T PRK13360 222 EPVAGSTGVLIPPKGYLQRLREICDK--HGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC--AKGLTNGAIPMGAVF 297 (442)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCccchhhhhcCCCCceeee--eeccccCccceEEEE
Confidence 988888899888 9999999999 999999999984 4321 11222234677754 7988653 2368888
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+......... .+... .++.+...+++..++++.+.+++ ..++.+++.+++.+.|+++
T Consensus 298 ~~~~i~~~~~~~~~~~~~--------~~~~~---T~~g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~ 363 (442)
T PRK13360 298 VSSEIHDAFMQGPEAGIE--------FFHGY---TYSGHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSLR 363 (442)
T ss_pred EcHHHHHHhhcCCccccc--------cccCC---CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhh
Confidence 999987766431100000 00112 33467777788888999888765 4557778888899888876
Q ss_pred CCccccCCCccCCCceEEEEc-CC-C---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIV-PS-H---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.+..+.+-. -.+.+..+.+ +. . ....++.+.|.++ ||.+... +..+|+++....++++++
T Consensus 364 ~~~~v~~vr--G~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-----~~~lr~~Ppl~~t~~eid 428 (442)
T PRK13360 364 DAPHVIDIR--NLGLVGAVELAPRDGKPGKRAYEVFLKCFEK-GLMIRYT-----GDILALSPPLIIEEAQID 428 (442)
T ss_pred cCCCeeeee--ccceEEEEEEecCCCCcchhHHHHHHHHHHC-CcEEEec-----CCEEEEeCCCccCHHHHH
Confidence 333322110 0121222232 11 1 1234677777654 9988642 357999977666655443
No 334
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.66 E-value=4.4e-14 Score=129.55 Aligned_cols=269 Identities=17% Similarity=0.163 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCC---
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG--- 118 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--- 118 (367)
....++++..|+.+|++.. ..++||+|.|+..++++.+.+||.||+..+.|=|.. ......|+..+++....+
T Consensus 70 G~i~eAqe~aA~~fgAd~t--yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~--~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 70 GPIKEAQELAARVFGADHT--YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH--HGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred ccHHHHHHHHHHHhCCCce--EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHH--HHHHHcCCceEEecCCCCccc
Confidence 4467899999999999873 578899999999999999999999999999877754 225567888887765432
Q ss_pred ---CCCCHHHHHHHHhccCCCCc-cEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCc-----eeecccc
Q 017726 119 ---EGAKLDVLASKLAADTAHTI-KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA-----IDFRMDE 189 (367)
Q Consensus 119 ---~~~d~e~l~~~i~~~~~~~~-~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~-----~~~~~~~ 189 (367)
+.++.+.+++.+.++. .. |++++++| +..|+.++.++|.+.++. .++|+.+|++|.+-. ++-...+
T Consensus 146 gi~ggI~~~~~~~~l~~~~--~~~k~~vitnp-TYdGv~~n~~~i~~~~~~--~~a~v~~deah~~~~~~~~~l~~~~~~ 220 (557)
T COG1982 146 GIIGGIPLETFKEALLAHP--DAEKLAVITNP-TYDGVCYNLRKIVELLHH--YGAWVLYDEAHPAHFDFSPMLPESALN 220 (557)
T ss_pred cccCCCCHHHHHHHHHhCh--hhheeEEEecC-ccceEeecHHHHHHHHhh--cCceEEhhhcCcccccccccCcchhhh
Confidence 4679999999988764 33 67777765 789999999999999999 999999999986521 1112223
Q ss_pred ccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh
Q 017726 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE 269 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~ 269 (367)
.++|+++-|.||.+++....+++..+.. + ..+...+.+.+..- +..+|+...++++..|-......
T Consensus 221 ~~~~~~tqS~HK~l~alSQaS~iHv~~~--~----------~~~~~r~nea~~~h--~STSPsY~l~ASlD~Ar~~~~~~ 286 (557)
T COG1982 221 GGADFVTQSTHKLLAALSQASMIHVKDG--R----------AVNHERFNEALMMH--QSTSPSYPLMASLDVARMQEGNA 286 (557)
T ss_pred cCceEEEechhhhhhhhhhhHHHhhCCC--c----------cCCHHHHHHHHHHH--ccCCchHHHHHHHHHHHHhhhhh
Confidence 5789999999999987665566666542 0 11111111222211 13367777777777755555555
Q ss_pred C---hHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc-----------------cCCCceEEEEcC-CCCCHHHHHHHHH
Q 017726 270 G---LENVIERHRRLGKATRLAVEAW-GLKNCTQKEE-----------------WFSDTVTAVIVP-SHINSSEIVRRAW 327 (367)
Q Consensus 270 g---~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~l~~~L~ 327 (367)
| .++........++.+++...+. ++++..+..- ...+.-+.+..| .|+++..+.++|.
T Consensus 287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~ 366 (557)
T COG1982 287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLR 366 (557)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHH
Confidence 5 2333566677777777777776 5666665320 012222334443 4788999999997
Q ss_pred hhCCeEE
Q 017726 328 QRYNLSL 334 (367)
Q Consensus 328 ~~~gv~v 334 (367)
++ |+..
T Consensus 367 e~-gii~ 372 (557)
T COG1982 367 EH-GIIP 372 (557)
T ss_pred Hc-CCee
Confidence 66 6544
No 335
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=3.8e-13 Score=125.22 Aligned_cols=310 Identities=17% Similarity=0.117 Sum_probs=185.6
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEE
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl 88 (367)
++++.+++.++... .......+...++.+++.+..+..- +.+.|++||++|+..++.... ....+|+
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii 150 (453)
T PRK06943 72 NPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTL-GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFV 150 (453)
T ss_pred CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 45555555554321 1111123455677777877765332 369999999999999887531 1245788
Q ss_pred EEeCCcchHHHHHHHHHhC------------CceEEEeCCCCCC------------CCHHHHHHHHhccCCCCccEEEEE
Q 017726 89 SFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
....+|++......+ ..| ..+..++.+.... -+++++++.++++. +++.+|++.
T Consensus 151 ~~~~~yHG~t~gals-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~iAAviiE 228 (453)
T PRK06943 151 CLANGYHGETIGALG-VTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERA-GKIAALIVE 228 (453)
T ss_pred EECCCcCCCcHHhhc-ccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-CceEEEEEe
Confidence 888888885321111 011 1123343322110 12467777776544 577888888
Q ss_pred e-cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-Ccceeee
Q 017726 145 H-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (367)
Q Consensus 145 ~-~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~ 213 (367)
. .....|.+.+ +++++++|++ ||+++|.||.++..... ........|+++. .|.++|. ..+|.++
T Consensus 229 Pvvqg~gG~~~~~~~yl~~lr~lc~~--~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~gG~~Pi~av~ 304 (453)
T PRK06943 229 PLVQCAAGMAMHDPSYLRGLRALCDR--YGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCL--SKGISGGYLPLSLVL 304 (453)
T ss_pred ccccccCCcccCCHHHHHHHHHHHHH--cCCEEEeechhhCCCCCcchhHHHhCCCCCCeEee--ehhhccCcccceEEE
Confidence 7 4777787764 7789999999 99999999997643221 1222335788888 6888765 3579999
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+........ +..+. .+..+...+++..++|+.+++++ ..++..+..++|.+.|+++
T Consensus 305 ~~~ei~~~~~~~~~~~~----------~~~~~--T~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~ 369 (453)
T PRK06943 305 SRDAIFAAFYDDDVTRG----------FLHSH--SYTGNPLACRAALATLDLFAEDD---VLARNARKSARLRAALAPLA 369 (453)
T ss_pred EcHHHHHhhcccCccCC----------ccCCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHh
Confidence 99998876653110000 00121 33467777788888888888775 3456667778888888775
Q ss_pred CCccccCCCccCCCceEEEEcCCCCC-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSHIN-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
....+..-. -.+.++.+.+..+.+ ...+.+.+.+ +||.+.+. +..+|+++....+++|+.
T Consensus 370 ~~~~v~~vr--G~Gl~~gvel~~~~~~~~~~~~~i~~~~~~-~Gll~~~~-----g~~l~~~Ppl~it~~eid 434 (453)
T PRK06943 370 AHPQVRHLR--QRGTIFAFDVALDGDAARTFSRRFFEAALE-RELLLRPI-----GTTVYLMPPYVLDDDEIA 434 (453)
T ss_pred cCCCEEeEe--ccccEEEEEEccCCCcchHHHHHHHHHHHH-CCcEEEec-----CCEEEEeCCCcCCHHHHH
Confidence 322222111 233455555521111 2356777765 49988642 246999866666555443
No 336
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=3.3e-13 Score=125.40 Aligned_cols=283 Identities=16% Similarity=0.105 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHHHHhC------------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLN------------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g------------ 107 (367)
+...++.++|.+.......+.+.|++||++|++.++... ....++|+....+|++.....+.. .+
T Consensus 97 ~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~-t~~~~~~~~~~~~~ 175 (441)
T PRK05769 97 EPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSL-TASKPVQRKGFFPL 175 (441)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHh-cCCCcccccCCCCC
Confidence 455678888887764322246999999999999988642 233467888888888864211111 11
Q ss_pred -CceEEEeCCCCCC-----CC--------HHHHHH-HHhc--cCCCCccEEEEEecCCCcccccc----HHHHHHHHHhc
Q 017726 108 -FNVDVVESDWGEG-----AK--------LDVLAS-KLAA--DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEY 166 (367)
Q Consensus 108 -~~~~~v~~~~~~~-----~d--------~e~l~~-~i~~--~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~ 166 (367)
..+..++.+.... -+ ++.+++ .+++ .+ +++.+|++.......|.+.| ++++.++|++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~-~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~- 253 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP-EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK- 253 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC-CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH-
Confidence 1133343321111 01 233555 3322 12 46788888888888899888 9999999999
Q ss_pred CCCcEEEEeeeeccCcee---eccc--cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHh
Q 017726 167 RHPALFLVDGVSSICAID---FRMD--EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFY 241 (367)
Q Consensus 167 ~~~~~vi~D~~~~~~~~~---~~~~--~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
+|+++|+|++++..... +... ....|++++ +|.+++...+|.+++++++.......
T Consensus 254 -~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~--~K~l~~G~p~gav~~~~~i~~~~~~~---------------- 314 (441)
T PRK05769 254 -YGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITL--AKAIAGGLPLGAVIGRAELMFLPPGS---------------- 314 (441)
T ss_pred -cCCEEEEechhhCCCcccceehhhccCCCCCEEEE--cccccCCcccEEEEEehhhhhcCCCC----------------
Confidence 99999999998732111 1111 223588765 68887655578999998876422100
Q ss_pred hcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCC--
Q 017726 242 NLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHI-- 317 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~-- 317 (367)
..++ ++.+...+++..++++.+.+ ...++..++.++|++.|+++ .+.+...-. -.+.++.+.+.+..
T Consensus 315 ~~~T---~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vr--g~G~~~~i~~~~~~~~ 385 (441)
T PRK05769 315 HANT---FGGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVR--GLGLMIGVELVKDRKE 385 (441)
T ss_pred CCCC---CCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeee--cceEEEEEEeccCCcc
Confidence 0122 23455566777778888766 34567778888888888775 244333211 12335555542210
Q ss_pred ----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 318 ----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 318 ----~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
....+.+.+.+ .||.+.+. ....+|+++....+++|+.
T Consensus 386 ~~~~~~~~~~~~~~~-~Gil~~~~----~~~~lr~~p~l~~t~~~id 427 (441)
T PRK05769 386 PDPKLRDKVLYEAFK-RGLLLLGA----GKSAIRIIPPLIITEEEAD 427 (441)
T ss_pred ccHHHHHHHHHHHHh-CCcEEecC----CCCEEEEeCCCCCCHHHHH
Confidence 12356666765 49988642 2357999987766665554
No 337
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.65 E-value=3e-13 Score=125.75 Aligned_cols=292 Identities=19% Similarity=0.179 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C--CCCeEEEEeCCcchHHHHHHHH------H--
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S--PGDRIISFLIGQFSLLWIDQQQ------R-- 105 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~--~gd~vl~~~~~~~~~~~~~~~~------~-- 105 (367)
+...++.++|.+++... .+.+.|++||++|++.++.... . ...+|+....+|++........ .
T Consensus 92 ~~~~~la~~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~ 170 (445)
T PRK09221 92 PLAFELAERLAELAPGG-LDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKM 170 (445)
T ss_pred HHHHHHHHHHHHhCCCC-CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhc
Confidence 44557777777776422 2369999999999999886421 1 1347888888888753211110 0
Q ss_pred hC---CceEEEeCCC-C----CCC--------CHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHh
Q 017726 106 LN---FNVDVVESDW-G----EGA--------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (367)
Q Consensus 106 ~g---~~~~~v~~~~-~----~~~--------d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~ 165 (367)
.+ ..+..++.+. . +.. ..+++++.++....+++.+|++.......|.+.| +++++++|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~ 250 (445)
T PRK09221 171 FGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDK 250 (445)
T ss_pred cCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 00 1123333321 0 000 1357777776432246788999998888999888 9999999999
Q ss_pred cCCCcEEEEeeeec-cCce--e--eccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 166 YRHPALFLVDGVSS-ICAI--D--FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 166 ~~~~~~vi~D~~~~-~~~~--~--~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+|+++|+||+++ +|.. . ........|++++ +|.+++. ..+|.+++++++.+.+.... ....
T Consensus 251 --~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~--~~~~------- 317 (445)
T PRK09221 251 --HGILLIFDEVITGFGRLGAAFAAERFGVTPDIITF--AKGLTNGAIPMGAVIASDEIYDAFMQGP--EYAI------- 317 (445)
T ss_pred --cCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEe--ccccccCcccceeeEEcHHHHHhhccCc--cccc-------
Confidence 999999999985 3311 1 1222234587765 6777543 23688899999887664310 0000
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC--C
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS--H 316 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--~ 316 (367)
.+..+. .++.+...+++..++++.+.+++ +.++..++.++|++.|+++ +...+.+-. -.+.+..+.+.+ .
T Consensus 318 ~~~~~~--T~~~~pl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vr--g~Gl~~~v~~~~~~~ 390 (445)
T PRK09221 318 EFFHGY--TYSAHPVACAAGLATLDIYREED---LFERAAELAPYFEDAVHSLKGLPHVIDIR--NIGLVAGIELAPRPG 390 (445)
T ss_pred cccccc--CCCcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEEEe--cCceEEEEEEecccc
Confidence 000121 23456656677777888887764 4668888999999999886 443323211 122233333311 1
Q ss_pred ---CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 ---INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 ---~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
....++.+.+.++ ||.+..+ +..+|+++....+++++.
T Consensus 391 ~~~~~~~~~~~~~~~~-Gv~~~~~-----~~~lr~~Ppl~~t~~eid 431 (445)
T PRK09221 391 APGARGYEAFMKCFEK-GLLVRYT-----GDTIALSPPLIIEKAQID 431 (445)
T ss_pred cccchHHHHHHHHHHC-CeEEeec-----CCEEEEECCccCCHHHHH
Confidence 1234677888655 9998642 357999977666655443
No 338
>PRK07678 aminotransferase; Validated
Probab=99.65 E-value=5.7e-13 Score=124.18 Aligned_cols=315 Identities=13% Similarity=0.072 Sum_probs=184.9
Q ss_pred hHHHHHHHccCCCC--CCCC-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CCC-CeEEE
Q 017726 21 PDQVIRAMNRNNED--YRSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPG-DRIIS 89 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~-~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~g-d~vl~ 89 (367)
.+++.+++.++... +... ...+...++.+.|.++++.. +.+.|++||++|++.++.... .+| .+|+.
T Consensus 65 ~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~--~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~ 142 (451)
T PRK07678 65 RKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGE--YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFIS 142 (451)
T ss_pred CHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 45556655554332 1111 12244567888888887543 369999999999999886421 123 57888
Q ss_pred EeCCcchHHHHHHHHHhC------------CceEEEeCCCCCCC---------C---HHHHHHHHhccCCCCccEEEEEe
Q 017726 90 FLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEGA---------K---LDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~~---------d---~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
...+|++....... ..+ ..+..++.+..... + ++.++++++....+++.+|++..
T Consensus 143 ~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP 221 (451)
T PRK07678 143 RYRAYHGNSMGALA-ATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEP 221 (451)
T ss_pred ECCCcCCccHHHhh-cCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEcc
Confidence 88888885421111 111 11233332211111 1 23356666522115688999998
Q ss_pred cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-CcceeeeeC
Q 017726 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVCAS 215 (367)
Q Consensus 146 ~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~ 215 (367)
.....|.+.| +++++++|++ +|+++|.||++...... +.......|+++. .|.+++. ..+|.++++
T Consensus 222 iqg~gG~~~~~~~fl~~lr~lc~~--~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~--gK~lggG~~Pi~av~~~ 297 (451)
T PRK07678 222 IITGGGVLMPPQDYMKAVKEICQK--HGALLISDEVICGFGRTGKAFGFMNYGVKPDIITM--AKGITSAYLPLSATAVK 297 (451)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHH--cCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEe--ecccccCCcceeEEEEc
Confidence 8877888876 7889999999 99999999998532211 1222334788876 7988765 347999999
Q ss_pred HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--C
Q 017726 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--G 293 (367)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g 293 (367)
+++.+.+....... .+..+. .++.+...+++..++++.+.+++ +.++..++.++|++.|++. .
T Consensus 298 ~~i~~~~~~~~~~~----------~~~h~~--T~~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~ 362 (451)
T PRK07678 298 KEIYEAFKGKGEYE----------HFRHVN--TFGGNPAACALALKNLEIMENEN---LIERSAQLGELLLEQLKEELGE 362 (451)
T ss_pred HHHHHHHhccCccc----------ccccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhc
Confidence 99987775321000 001121 34567777788888898887765 3456677777777777553 3
Q ss_pred CccccCCCccCCCceEEEEcCCC------CC---HHHHHHHHHhhCCeEEccCCC--CCCCcEEEEeecCCCCHHHHH
Q 017726 294 LKNCTQKEEWFSDTVTAVIVPSH------IN---SSEIVRRAWQRYNLSLGLGLN--KVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~l~~~L~~~~gv~v~~g~~--~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...+..-. ..+.++.+.+.++ .+ ...+.+.+.++ ||.+.+... +..+..+|+++...++++|+.
T Consensus 363 ~~~v~~vr--g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid 437 (451)
T PRK07678 363 HPLVGDIR--GKGLLVGIELVNDKETKEPADNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSPPLVISSEEIA 437 (451)
T ss_pred CCCEEEEE--eeceEEEEEEecCCcccCcCchHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEECCCcCCHHHHH
Confidence 32222100 1233444544211 01 34577777655 999865321 122467999987766655443
No 339
>PRK06105 aminotransferase; Provisional
Probab=99.65 E-value=3.2e-13 Score=126.10 Aligned_cols=313 Identities=13% Similarity=0.064 Sum_probs=186.0
Q ss_pred hHHHHHHHccCCCC----CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeE
Q 017726 21 PDQVIRAMNRNNED----YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~v 87 (367)
++++.+++.++... +.. ....+...++.+.|.+++..+- +.+.|++||++|+..++.... . + ..+|
T Consensus 66 ~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~i 144 (460)
T PRK06105 66 EQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKI 144 (460)
T ss_pred CHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 45566666654322 111 1123555678888888775322 368999999999999887521 1 2 3578
Q ss_pred EEEeCCcchHHHHHHH--H------HhC---CceEEEeCCCCCCC-------------CHHHHHHHHhccCCCCccEEEE
Q 017726 88 ISFLIGQFSLLWIDQQ--Q------RLN---FNVDVVESDWGEGA-------------KLDVLASKLAADTAHTIKAICI 143 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~--~------~~g---~~~~~v~~~~~~~~-------------d~e~l~~~i~~~~~~~~~lv~~ 143 (367)
+....+|++....... . ..+ ..+..++.+..... ..+++++++.+....++.+|++
T Consensus 145 l~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIv 224 (460)
T PRK06105 145 ISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIG 224 (460)
T ss_pred EEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEE
Confidence 8888878875321110 0 001 11223333211111 1356777775321146788899
Q ss_pred EecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeec-cCce----eeccccccceEEEecCCCcccCC-Ccceeee
Q 017726 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAI----DFRMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (367)
Q Consensus 144 ~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~-~~~~----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~ 213 (367)
.......|.+.+ +++++++|++ +|+++|+||++. +|-. .+.......|+++. +|.++|. ..+|.++
T Consensus 225 EPiqg~gG~~~~~~~yl~~lr~lc~~--~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~--gK~lggG~~P~~av~ 300 (460)
T PRK06105 225 EPVMGAGGVIVPPKTYWEKIQAVLRK--YDILLVADEVICGFGRTGNMFGCETFGIKPDILVM--SKQLSSSYQPLSAVL 300 (460)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHH--cCCeEEEeccccCCCcCchhhhHHhcCCCCCeeee--ecccccCcccceEEE
Confidence 888888888876 8899999999 999999999984 4321 12222335787765 7888764 2369999
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+......... +..+ ..+..+...+++..++++.+.+++ ..++.+++.++|++.|+++
T Consensus 301 ~~~~i~~~~~~~~~~~~~---------~~h~--~T~~gnpl~~aaa~a~L~~i~~~~---l~~~v~~~g~~l~~~L~~l~ 366 (460)
T PRK06105 301 MNEKVYDPIADESGKIGT---------FGHG--FTASGHPVAAAVALENLAIIEERD---LVGNAAERGARLQARLRALA 366 (460)
T ss_pred EcHHHHHHHhcccccCcc---------cccC--CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhh
Confidence 999987766532100000 0001 133466666777777888888764 4567888888888888876
Q ss_pred CCccccCCCccCCCceEEEEcCCC-C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSH-I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~-~-----~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...++..-. -.+.+..+.+... . + ...+.+.+.+ +||.+.+. ++.+|+++....+++|+.
T Consensus 367 ~~~~v~~vr--G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~-~Gvl~~~~-----g~~i~l~Ppl~it~~eid 437 (460)
T PRK06105 367 DHPLVGEVR--GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHE-HGVISRAM-----GDTLAFCPPLIITAAQVD 437 (460)
T ss_pred cCCCeEEEE--ecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHH-CCeEEEec-----CCEEEEECCCccCHHHHH
Confidence 333322111 1233444544111 0 1 2356777764 59998752 357999987766655444
No 340
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.65 E-value=2.5e-13 Score=125.96 Aligned_cols=241 Identities=16% Similarity=0.111 Sum_probs=155.2
Q ss_pred hHHHHHHHccCCCCCC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~ 97 (367)
.+.+.+++.++..... .....+...++.+++.+.+. ..+.+.|++||++|++.++... .....+|+....+|++.
T Consensus 71 ~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p--~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~ 148 (428)
T PRK12389 71 HPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP--SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGH 148 (428)
T ss_pred CHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC--CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCC
Confidence 3556666665433211 11122445667777777654 2346999999999999988642 23346788888888885
Q ss_pred HHHHHHHHhCCc-------------------eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc---
Q 017726 98 LWIDQQQRLNFN-------------------VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--- 155 (367)
Q Consensus 98 ~~~~~~~~~g~~-------------------~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~--- 155 (367)
....+.. .+.. +..++. .|++.+++.++++. +++.+|++.......|.+.|
T Consensus 149 t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~-~~vaavi~EPv~g~~G~~~p~~~ 221 (428)
T PRK12389 149 SDLVLVA-AGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWG-DEVAAVLVEPIVGNFGIVEPKPG 221 (428)
T ss_pred hHHHHHh-cCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcC-CcEEEEEEeCCCCCCCCcCCCHH
Confidence 4211111 1111 111111 26889999887654 46788899988888898887
Q ss_pred -HHHHHHHHHhcCCCcEEEEeeeeccCcee----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCce
Q 017726 156 -LSKVRKLLDEYRHPALFLVDGVSSICAID----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRV 230 (367)
Q Consensus 156 -~~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~ 230 (367)
+++++++|++ +|+++|+||+++.+-.. ........|+++ ..|.++|...+|.+++++++.+.+.... ..
T Consensus 222 yl~~l~~lc~~--~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt--~gK~lggG~Pi~av~~~~~i~~~~~~~~--~~ 295 (428)
T PRK12389 222 FLEAVNELAHE--AGALVIYDEVITAFRFMYGGAQDLLGVEPDLTA--LGKIIGGGLPIGAYGGRKDIMEQVAPLG--PA 295 (428)
T ss_pred HHHHHHHHHHH--cCCEEEEEccccccccCcchhhHHhCCCCCeee--echhhcCCCceeEEeEHHHHHhhhccCC--Cc
Confidence 8899999999 99999999998744111 111123468764 4798876544788899999887764210 00
Q ss_pred eechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 231 FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
.. .+ .+..+...+++..++++.+.+++ ..++..++.++|++.|+++
T Consensus 296 ~~----------~~---T~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l 341 (428)
T PRK12389 296 YQ----------AG---TMAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEA 341 (428)
T ss_pred cc----------cc---CCccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHH
Confidence 00 12 33466767778888888887654 4557777888888888764
No 341
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.64 E-value=4.4e-13 Score=123.75 Aligned_cols=307 Identities=14% Similarity=0.092 Sum_probs=182.2
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEE
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl 88 (367)
.+++.+++.++... + ......+...++.+.+.+..... .+.+.|++||++|++.++.... .+ ..+|+
T Consensus 58 ~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii 136 (422)
T PRK05630 58 HPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNG-LDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLL 136 (422)
T ss_pred CHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 34555555554322 1 11112344567777787776422 2469999999999999886421 12 35788
Q ss_pred EEeCCcchHHHHHHHHHhC-------------CceEEEeCCCCCCCC-------HHHHHHHHhccCCCCccEEEEEec-C
Q 017726 89 SFLIGQFSLLWIDQQQRLN-------------FNVDVVESDWGEGAK-------LDVLASKLAADTAHTIKAICIVHN-E 147 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g-------------~~~~~v~~~~~~~~d-------~e~l~~~i~~~~~~~~~lv~~~~~-~ 147 (367)
....+|++........ .+ .....+|.+.....+ .+.+++.+. +++.+|++... .
T Consensus 137 ~~~~~yHG~t~~als~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~iAAvi~EPi~q 211 (422)
T PRK05630 137 TWRSGYHGDTFAAMSV-CDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID----ETVAAIIIEPIVQ 211 (422)
T ss_pred EECCCcCCccHHHhcc-CCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh----hceEEEEEechhc
Confidence 8888888853211111 11 112333333111111 234445454 35678888874 6
Q ss_pred CCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-CcceeeeeCHH
Q 017726 148 TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPK 217 (367)
Q Consensus 148 n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~ 217 (367)
...|.+.| +++++++|++ +|+++|+||++...... ........|++++ .|.++|. ..+|.+.++++
T Consensus 212 g~gG~~~~~~~~l~~lr~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l~gG~~p~~av~~~~~ 287 (422)
T PRK05630 212 GAGGMRFHDVALIEGVRTLCDK--HDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKALTGGFMSFAATLCTDK 287 (422)
T ss_pred CcCCcccCCHHHHHHHHHHHHH--cCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--echhhcCccccceeeccHH
Confidence 66777654 7889999999 99999999998533221 1222334788854 7999653 34688999999
Q ss_pred HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcc
Q 017726 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN 296 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 296 (367)
+.+.+....... .+..+. .+..+...+++..++++.+.+++ ..++..++.++|++.|+++ ..+.
T Consensus 288 i~~~~~~~~~~~----------~~~h~~--T~~g~Pla~aaa~aaL~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~ 352 (422)
T PRK05630 288 VAQLISTPNGGG----------ALMHGP--TFMANPLACAVAHASLEIIETGM---WRKQVKRIEAELIAGLSPLAHLPG 352 (422)
T ss_pred HHHHHhccCCCC----------ccccCC--CCcCCHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHhhcCCC
Confidence 887664211000 001122 34567777788888899887764 3457777888888888765 2222
Q ss_pred ccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 297 CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+..-. -.+.++.+.+.+..+...+.+.+.++ |+.+.+. ++.+|+.+.-..++++++
T Consensus 353 v~~vR--g~Gl~~~ie~~~~~~~~~~~~~~~~~-Gl~~~~~-----g~~l~~~PpL~it~~~i~ 408 (422)
T PRK05630 353 VADVR--VLGAIGVVEMEQPVDMEEATQAAVDH-GVWLRPF-----GRLVYVMPPYITTSEQIA 408 (422)
T ss_pred eeeee--ccccEEEEEECCcccHHHHHHHHHHC-CeEEEec-----CCEEEEECCccCCHHHHH
Confidence 22101 13446666663333456788888655 9998642 367999887666665443
No 342
>PRK07482 hypothetical protein; Provisional
Probab=99.63 E-value=9.2e-13 Score=123.03 Aligned_cols=315 Identities=14% Similarity=0.060 Sum_probs=185.7
Q ss_pred hHHHHHHHccCCCC----CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C--CCCeE
Q 017726 21 PDQVIRAMNRNNED----YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S--PGDRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~--~gd~v 87 (367)
++++.+++.++... +.. ....+...++.++|.+..... .+.+.|++||++|++.++.... . ...+|
T Consensus 68 ~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~-~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~I 146 (461)
T PRK07482 68 RTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAG-MSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKI 146 (461)
T ss_pred CHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceE
Confidence 45566666664332 111 112355667777787776422 2468999999999999886431 1 13568
Q ss_pred EEEeCCcchHHHHHHH--------HHhC---CceEEEeCCCCCC-------------CCHHHHHHHHhccCCCCccEEEE
Q 017726 88 ISFLIGQFSLLWIDQQ--------QRLN---FNVDVVESDWGEG-------------AKLDVLASKLAADTAHTIKAICI 143 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~--------~~~g---~~~~~v~~~~~~~-------------~d~e~l~~~i~~~~~~~~~lv~~ 143 (367)
+....+|++....... ...+ ..+..++.+.... .+++.+++.+.....+++.+|++
T Consensus 147 i~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~ 226 (461)
T PRK07482 147 ISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIA 226 (461)
T ss_pred EEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8888888885321110 0011 1122233221111 13567787775322146788899
Q ss_pred EecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCC-cceeee
Q 017726 144 VHNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPT-GMGIVC 213 (367)
Q Consensus 144 ~~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~ 213 (367)
.......|.+.+ +++|+++|++ +|+++|.||.+..... .........|+++. .|.++|.. .+|.++
T Consensus 227 EPvqg~gG~~~~~~~yl~~lr~lc~~--~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~ 302 (461)
T PRK07482 227 EPVLGTGGIVPPPAGYWPAIQAVLKK--YDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITV--AKGLTSAYAPLSGSI 302 (461)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHH--hCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEE--ccccccCccccceee
Confidence 888877787764 7789999999 9999999999764322 12222335788887 68887653 578889
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+........ .+..+. .++.+...+++..++++.+.+++ ..++..++.+++.+.|+++
T Consensus 303 ~~~~i~~~~~~~~~~~~---------~~~h~~--T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~ 368 (461)
T PRK07482 303 VGEKVWDVLEQGSDEHG---------AIGHGW--TYSGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAF 368 (461)
T ss_pred ecHHHHHHHhcccccCC---------ccccCC--CCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHH
Confidence 99998776642110000 001121 34567777788888898888775 3445667777888887764
Q ss_pred -CCccccCCCccCCCceEEEEcCCCC------C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 -GLKNCTQKEEWFSDTVTAVIVPSHI------N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...++..-. -.+.++.+.+.++. + ...+++.+.++ ||.+.+.- .++.+|+.+....+++|+.
T Consensus 369 ~~~~~v~~vr--G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~---~~~~i~~~Ppl~it~~ei~ 442 (461)
T PRK07482 369 GDHPLVGEVR--GVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALER-GVIARAMP---HGDILGFAPPLVLTRAEAD 442 (461)
T ss_pred hcCCCEEEEe--eceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHC-CcEEecCC---CCCEEEEeCCCCCCHHHHH
Confidence 333322111 13334555552211 1 24577777654 99885421 2467999866666655543
No 343
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.63 E-value=5.4e-14 Score=123.47 Aligned_cols=247 Identities=17% Similarity=0.088 Sum_probs=163.2
Q ss_pred cCCCCCChHHHHHHHccCCCCCC----CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEE
Q 017726 14 VPGPVHIPDQVIRAMNRNNEDYR----SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIIS 89 (367)
Q Consensus 14 ~~~p~~~~~~v~~a~~~~~~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~ 89 (367)
.-|-...++++++++.+....+. +-.......+....-...++...++.+.++++.+.|+..++.++..++ ++++
T Consensus 33 ~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~-EvVi 111 (395)
T COG1921 33 NLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGK-EVVV 111 (395)
T ss_pred cCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCC-eEEE
Confidence 34667788888888888544322 111123333444434445566555557888999999999888876644 4444
Q ss_pred EeC-----CcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc--ccHHHHHHH
Q 017726 90 FLI-----GQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT--NNLSKVRKL 162 (367)
Q Consensus 90 ~~~-----~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~--~~~~~i~~~ 162 (367)
... ++| +....++..|++++++... +.....+++.+|.+ ++++++-++.+|. |.. .+.+++.++
T Consensus 112 s~g~lV~gg~~--~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIne----~ta~llkV~s~~~-~f~~~l~~~~l~~i 182 (395)
T COG1921 112 SRGELVEGGAF--RVPDIIRLAGAKLVEVGTT--NRTHLKDYELAINE----NTALLLKVHSSNY-GFTGMLSEEELVEI 182 (395)
T ss_pred EccccccCCCC--ChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhcc----CCeeEEEEeeccc-cccccccHHHHHHH
Confidence 322 233 3567889999999988754 34578999999995 5588877777765 433 578899999
Q ss_pred HHhcCCCcEEEEeeeeccCcee-e---ccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 163 LDEYRHPALFLVDGVSSICAID-F---RMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 163 ~~~~~~~~~vi~D~~~~~~~~~-~---~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
||+ +|+++++|.+++..... . ..-..|+|++++|+.|.|+||. .|+++++++++++++.....
T Consensus 183 a~~--~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPq-aGii~GkKelI~~lq~~~l~---------- 249 (395)
T COG1921 183 AHE--KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQ-AGIIVGKKELIEKLQSHPLK---------- 249 (395)
T ss_pred HHH--cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCc-cceEechHHHHHHHHhhhhh----------
Confidence 999 99999999998653211 1 1223489999999999998888 59999999999988753211
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (367)
..+ ...-..++++.++|+.+..........+..+......+.|.+
T Consensus 250 Ral--------rv~K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~~ 294 (395)
T COG1921 250 RAL--------RVDKETLAALEAALELYLQPEILGERLRTLRLLTQPAEALLA 294 (395)
T ss_pred hhh--------hcCcHhHHHHHHHHHHHcCchhhhhhhHHHHhhccHHHHHHH
Confidence 111 233345588999999887653222233333333344444444
No 344
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.8e-12 Score=120.79 Aligned_cols=308 Identities=15% Similarity=0.140 Sum_probs=183.6
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
.+++.+++.++... ...........++.+.+.+...... +.+.|++||++|++.++... .....+|+....+|
T Consensus 71 ~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~y 149 (457)
T PRK05639 71 HPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIEN-PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAY 149 (457)
T ss_pred CHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCc-CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCc
Confidence 45566666654332 1112223455677788887765332 36999999999999988642 23445788888888
Q ss_pred chHHHHHHHH-------HhCC-----ceEEEeCCCCCC--------CCH--------HHHHHHHhcc--CCCCccEEEEE
Q 017726 95 FSLLWIDQQQ-------RLNF-----NVDVVESDWGEG--------AKL--------DVLASKLAAD--TAHTIKAICIV 144 (367)
Q Consensus 95 ~~~~~~~~~~-------~~g~-----~~~~v~~~~~~~--------~d~--------e~l~~~i~~~--~~~~~~lv~~~ 144 (367)
++........ ..+. .+..+|.+.... -+. +.+++.+.+. ..+++.+|++.
T Consensus 150 HG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~E 229 (457)
T PRK05639 150 HGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAE 229 (457)
T ss_pred CCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEEC
Confidence 8854211111 0111 233444432111 022 2344444221 11567889999
Q ss_pred ecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeC
Q 017726 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCAS 215 (367)
Q Consensus 145 ~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~ 215 (367)
......|.+.| +++++++|++ +|+++|+||+++..... .......+|+++ .+|.+++..++|.++++
T Consensus 230 Piqg~gG~~~p~~~yl~~l~~lc~~--~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~gG~pi~av~~~ 305 (457)
T PRK05639 230 PIQGDAGIVVPPENFFKELKKLLDE--HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVASGMGLSGVIGR 305 (457)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcCCCcceeEEeh
Confidence 88887888765 7789999999 99999999998732211 121223578888 48999866668999999
Q ss_pred HHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--C
Q 017726 216 PKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--G 293 (367)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g 293 (367)
+++.+ .... . +. . .+..+...+++..++++.+.+++ ..++..++.++|++.|+++ +
T Consensus 306 ~~i~~-~~~~---~-~~-----------~---T~~g~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~ 363 (457)
T PRK05639 306 KELMD-LTSG---S-AL-----------L---TPAANPVISAAAEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKES 363 (457)
T ss_pred HHHHh-hcCC---C-cc-----------c---CCCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHh
Confidence 99876 2211 0 00 1 22355666677777888887764 3456666888888888774 3
Q ss_pred CccccCCCccCCCceEEEEcCC--CC-C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 294 LKNCTQKEEWFSDTVTAVIVPS--HI-N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~--~~-~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.++..-. -.+.++.+.+.+ .. + ...+.+.+.++ |+.+.+. +..++.+|+.+....+++|++
T Consensus 364 ~~~~~~Vr--G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~--g~~~~~lr~~Ppl~it~~~id 431 (457)
T PRK05639 364 FEVIGDVR--GKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPSY--GMFGNVIRITPPLVITKEIAE 431 (457)
T ss_pred CCCEEeec--cceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEeec--CCCCCEEEEeCCCccCHHHHH
Confidence 44433211 122344444311 11 1 24567777654 9998653 122468999987777766544
No 345
>PRK05965 hypothetical protein; Provisional
Probab=99.63 E-value=1.2e-12 Score=122.27 Aligned_cols=314 Identities=16% Similarity=0.120 Sum_probs=188.2
Q ss_pred hHHHHHHHccCCCC--CCC---CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeE
Q 017726 21 PDQVIRAMNRNNED--YRS---PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~---~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~v 87 (367)
.+++.+++.++... +.. ....+...++.++|.++...+ .+.+.|++||++|++.++.... . + ..+|
T Consensus 64 ~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~ki 142 (459)
T PRK05965 64 QESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQF 142 (459)
T ss_pred CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCC-cCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEE
Confidence 56677777775432 111 111344557777777776322 2469999999999999886421 1 2 3578
Q ss_pred EEEeCCcchHHHHHHHH--------HhC---CceEEEeCCCCC----CCC--------HHHHHHHHhccCCCCccEEEEE
Q 017726 88 ISFLIGQFSLLWIDQQQ--------RLN---FNVDVVESDWGE----GAK--------LDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~~--------~~g---~~~~~v~~~~~~----~~d--------~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
+....+|++........ ..+ ..+..++.+... .-| ++++++.+++...+++.+|++.
T Consensus 143 i~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvE 222 (459)
T PRK05965 143 ISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCE 222 (459)
T ss_pred EEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 88888888853211110 011 112233322111 112 2567777765322467889999
Q ss_pred ecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeeee
Q 017726 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVCA 214 (367)
Q Consensus 145 ~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~ 214 (367)
......|.+.+ +++++++|++ ||+++|.||++...... ........|+++. .|.++|.. .+|.+++
T Consensus 223 Piqg~gG~~~p~~~yl~~lr~lc~~--~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~ 298 (459)
T PRK05965 223 PIQGSGGVIVPPKGWLKAMREACRE--LGILFVADEVITGFGRTGPLFACEAEGVVPDLMTV--AKGLTSGYVPMGAVLM 298 (459)
T ss_pred ccccCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhccCccCchhhhHhhcCCCCCeEEe--chhhccCCcceeEEEE
Confidence 88888888765 7789999999 99999999997643211 1222335788887 68887762 5899999
Q ss_pred CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-C
Q 017726 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-G 293 (367)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 293 (367)
++++.+.+........ .+..+. .++.+...+++..++++.+++++ ..++..+..++|.+.|+++ .
T Consensus 299 ~~~i~~~~~~~~~~~~---------~~~h~~--T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~ 364 (459)
T PRK05965 299 SDHVYQGIADGAGAAA---------PVGHGY--TYSAHPVSAAVGLEVLRLYHEGG---LLANGQKAGPRFAAGLDALRA 364 (459)
T ss_pred cHHHHHHHhccccccc---------cccccC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhcc
Confidence 9999876643110000 000121 33466667777888888888775 4456778888888888876 3
Q ss_pred CccccCCCccCCCceEEEEcCCCC------C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 294 LKNCTQKEEWFSDTVTAVIVPSHI------N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..++..-. -.+.++.+.+.++. + ...+.+.+.++ ||.+.+. .+..+|+.+....+++++.
T Consensus 365 ~~~v~~vr--G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gll~~~~----g~~~i~~~PpL~it~~ei~ 435 (459)
T PRK05965 365 HPLVGDVR--GRGLLGALELVADKATKTPFDAALDPADRIFDRAYAN-GLVFRAF----GDGVLGFAPALCCTEGEFD 435 (459)
T ss_pred CCCEEEEe--ecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhC-CeEEEec----CCcEEEEECCCcCCHHHHH
Confidence 33322111 13334445442110 1 23466666654 9988642 2356999876666655444
No 346
>PRK06062 hypothetical protein; Provisional
Probab=99.63 E-value=1.1e-12 Score=122.24 Aligned_cols=307 Identities=14% Similarity=0.065 Sum_probs=183.1
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcc
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQF 95 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~ 95 (367)
.+++.+++.++... +.. ....+...++-++|.++.... .+.+.|++||++|+..++... .....+|+....+|+
T Consensus 71 ~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yH 149 (451)
T PRK06062 71 HPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGD-LSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYH 149 (451)
T ss_pred CHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCC-CCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCC
Confidence 35566666654332 111 112344567777777776422 246999999999999988642 233457888888888
Q ss_pred hHHHHHHHHHhCC-----------ceEEEeCCCCCC------CC-------HHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 96 SLLWIDQQQRLNF-----------NVDVVESDWGEG------AK-------LDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 96 ~~~~~~~~~~~g~-----------~~~~v~~~~~~~------~d-------~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
+.....+.. .+. .+..++.+.... -| +++++++++....+++.+|++.......|
T Consensus 150 G~t~~als~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG 228 (451)
T PRK06062 150 GGTGSAINL-TGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAG 228 (451)
T ss_pred CCCHHHHhh-cCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCC
Confidence 864211111 110 122232221111 12 56778888643214678899998888889
Q ss_pred cccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHH
Q 017726 152 VTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEA 221 (367)
Q Consensus 152 ~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~ 221 (367)
.+.| +++++++|++ +|+++|+||+++..... ........|++++ .|.+++.. .+|.+++++++.+.
T Consensus 229 ~~~p~~~yl~~lr~lc~~--~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~--gK~lggG~~Pigav~~~~~i~~~ 304 (451)
T PRK06062 229 ILVPPPGYLAGVRELCDR--HGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITF--AKGVNSGYVPLGGVAISEAIAAT 304 (451)
T ss_pred cccCCHHHHHHHHHHHHH--cCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeee--chhhhcCCcCcEEEEEcHHHHHH
Confidence 8887 8999999999 99999999998743221 1222335787755 79997642 47888899988776
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHc--CCcccc
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLG-KATRLAVEAW--GLKNCT 298 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~-~~l~~~L~~~--g~~~~~ 298 (367)
+.... +..+. .++.+...+++..++|+.+++++ ..++..+.. +++.+.|+++ .++.+.
T Consensus 305 ~~~~~--------------~~~~~--T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~ 365 (451)
T PRK06062 305 FADRP--------------YPGGL--TYSGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVG 365 (451)
T ss_pred hccCC--------------CCCCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence 64210 00121 33456777778888888887765 444556665 4777777664 233322
Q ss_pred CCCccCCCceEEEEcCCC------C--------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSH------I--------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~------~--------~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.-. -.+.++.+.+.+. . ....+.+.|.+ .||.+.+ .++.+|+++....+++|++
T Consensus 366 ~vr--G~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gvl~~~-----~~~~lrl~ppl~~t~~eid 433 (451)
T PRK06062 366 EVR--GLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKE-RGLLPFV-----NGNRIHVVPPCTVTEDEVR 433 (451)
T ss_pred eEe--ccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHH-CCcEEee-----cCCEEEEECCccCCHHHHH
Confidence 110 1233444444111 0 12367777765 4998754 2457999876666655443
No 347
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.62 E-value=2.4e-13 Score=125.53 Aligned_cols=312 Identities=12% Similarity=0.081 Sum_probs=180.1
Q ss_pred hHHHHHHHccCCCCCCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNEDYRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~ 97 (367)
.+.+.+++.+....... ........++-+.+.+.+.... +.+.|++||++|+..++... .....+|+....+|++.
T Consensus 71 ~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~ 149 (433)
T PRK00615 71 HPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLED-HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGH 149 (433)
T ss_pred CHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCc-CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCC
Confidence 45556555554332111 1122445677777777775332 36999999999999988642 22345677777777774
Q ss_pred H-H-HHHHHHhCCc---eEE-E--eC-CCC----CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH----HHHH
Q 017726 98 L-W-IDQQQRLNFN---VDV-V--ES-DWG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL----SKVR 160 (367)
Q Consensus 98 ~-~-~~~~~~~g~~---~~~-v--~~-~~~----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~----~~i~ 160 (367)
. + .......+-. ... . +. ... ..-|++++++.+.+.. +++.+|++.......|.+.|. ++|+
T Consensus 150 td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~ 228 (433)
T PRK00615 150 ADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPGFIEGII 228 (433)
T ss_pred CcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHHHHHHHH
Confidence 2 1 0111111100 000 0 00 000 0126889999987544 467788888888888988874 5999
Q ss_pred HHHHhcCCCcEEEEeeeeccCce--e--eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 161 KLLDEYRHPALFLVDGVSSICAI--D--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 161 ~~~~~~~~~~~vi~D~~~~~~~~--~--~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++|++ ||+++|+|+++...-. . ........|+++ .+|.++|...+|.+++++++.+.+... ...+.
T Consensus 229 ~lc~~--~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~~i~~~~~~~--~~~~~---- 298 (433)
T PRK00615 229 QTCRR--TGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHKSIMDHLAPE--GTIFQ---- 298 (433)
T ss_pred HHHHH--cCCEEEEEcccccccccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecHHHHhhhcCC--CCccc----
Confidence 99999 9999999999852211 0 111123468876 589997543369999999998777431 00000
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH----cCCccccCCCccCCCceEEEE
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA----WGLKNCTQKEEWFSDTVTAVI 312 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~ 312 (367)
.+ .+..+...+++..++++.+++++ ..++..++.++|.+.|++ .|+++... +.+.++.+.
T Consensus 299 ------~~---T~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~----r~G~~~~i~ 362 (433)
T PRK00615 299 ------AG---TLSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLV----RYGSMFSFF 362 (433)
T ss_pred ------CC---CCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEE----eeceEEEEE
Confidence 12 23456667788888888887654 355666666777666655 35553222 233455555
Q ss_pred cCCCC----------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHhhhh
Q 017726 313 VPSHI----------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQLLF 365 (367)
Q Consensus 313 ~~~~~----------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~l~ 365 (367)
+.+.. + ...+.+.|.++ ||.+.+...+. .+++. ....++.|...++++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~--~~ls~--~ht~~did~~~~a~~ 423 (433)
T PRK00615 363 FNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFEA--SFLSS--AHSMENLDYAQNVLI 423 (433)
T ss_pred EeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCccccc--cceec--CCCHHHHHHHHHHHH
Confidence 52210 1 12577777655 99987654322 23333 334455555555554
No 348
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.62 E-value=1.9e-13 Score=123.10 Aligned_cols=238 Identities=13% Similarity=0.088 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChh---HHHHHHHHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEe
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGT---GAWESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVE 114 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt---~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 114 (367)
..+..-++...++++.|.+-.. .-+-.+++ +|+.++.+.--.+.++|+++..-|+.+. ....+...|++++.++
T Consensus 108 ~Lq~lfe~Qs~i~eLTGmdvaN-aSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~ 186 (429)
T PF02347_consen 108 RLQALFEYQSMICELTGMDVAN-ASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVP 186 (429)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-
T ss_pred HHHHHHHHHHHHHHhhCCCccC-CCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEec
Confidence 4566779999999999998432 23445555 4444444433344568999998888765 3345666799999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeee--ccCceeeccccccc
Q 017726 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS--SICAIDFRMDEWGI 192 (367)
Q Consensus 115 ~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~--~~~~~~~~~~~~~~ 192 (367)
.++++..| + +++..|++.+| |..|.+.++++|.+++|+ +|+++++ .+. +++.+ -+..++|+
T Consensus 187 ~~~~~~~d--------~----~~~a~v~vq~P-n~~G~~ed~~~i~~~~h~--~gal~~~-~ad~~aL~~l-~~Pge~GA 249 (429)
T PF02347_consen 187 LDEDGTTD--------D----DDTAAVMVQNP-NTFGVFEDIKEIADIAHA--AGALVIV-GADPNALGGL-KSPGEYGA 249 (429)
T ss_dssp BBTTCSB---------S----TTEEEEEEESS--TTSB--THHHHHHHHHH--TT-EEEE-CGGCCGCCTC---GGGGT-
T ss_pred ccccCCcc--------c----cCeEEEEeecC-CCCceEeeHHHHHHHHHH--cCCEEEE-ecCHHHHhCc-CChhhcCc
Confidence 88776555 3 46788988887 589999999999999999 9999887 443 22222 24456799
Q ss_pred eEEEecCCCcccCC-----CcceeeeeCHHHHHHhccCCCC---------ceeechH--HHHHHhhcCCccCCCCcHHHH
Q 017726 193 DVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKSV---------RVFFDWK--DYIKFYNLGTFWPYTPSIQLL 256 (367)
Q Consensus 193 d~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 256 (367)
|+++++ +|.|+.| ++.|++.++++++++++....+ .+.+.++ ++..+-+..+...-|...+..
T Consensus 250 DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A 328 (429)
T PF02347_consen 250 DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLA 328 (429)
T ss_dssp SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHH
T ss_pred cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHH
Confidence 999776 7877544 5579999999998888764331 1222222 233333444311112222222
Q ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCcc
Q 017726 257 YGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKN 296 (367)
Q Consensus 257 ~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 296 (367)
.+....+.++..+|++++.++...++.++++.|++. ++.+
T Consensus 329 ~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~ 369 (429)
T PF02347_consen 329 LAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF 369 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 233344556778899999999999999999999997 4433
No 349
>PRK12403 putative aminotransferase; Provisional
Probab=99.62 E-value=1.9e-12 Score=120.94 Aligned_cols=289 Identities=12% Similarity=0.041 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CCCCe-EEEEeCCcchHHHHHHHHHhCCc---
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPGDR-IISFLIGQFSLLWIDQQQRLNFN--- 109 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~gd~-vl~~~~~~~~~~~~~~~~~~g~~--- 109 (367)
.+...++.+++++++...- +.+.|++||++|+..++.... .+++. |+....+|++..... ....|.+
T Consensus 97 ~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~-~s~s~~~~~~ 174 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHY-SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAA-TALGGMKFMH 174 (460)
T ss_pred CHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhh-hhcCCCcccc
Confidence 3556788888888876332 358999999999999887532 23333 444555666653211 1111211
Q ss_pred --------eEEEeCCCCC----CC--------CHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHh
Q 017726 110 --------VDVVESDWGE----GA--------KLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (367)
Q Consensus 110 --------~~~v~~~~~~----~~--------d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~ 165 (367)
+..+|.+... .. +.+++++.+.+...+++.+|++.......|.+.| +++++++|++
T Consensus 175 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~ 254 (460)
T PRK12403 175 EMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQ 254 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 2333322110 11 1355666664322146778888888888898887 8999999999
Q ss_pred cCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 166 YRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+|+++|+||+++..... ........|+++ ..|.++|.. .+|.+++++++.+.+.... ..+
T Consensus 255 --~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~~~~~-~~~--------- 320 (460)
T PRK12403 255 --YDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTSGYVPMGGLVLSKRIAEALVEQG-GVF--------- 320 (460)
T ss_pred --cCCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--EcccccccccceEEEEECHHHHHHHhcCC-Ccc---------
Confidence 99999999998643221 122223468886 579887652 4688889988877664210 000
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCC
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHR-RLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~-~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
..++ .+..+...+++..++|+.+++++ ..++.. ++.++|++.|+++ ...++..-. -.+.+..+.+.+.
T Consensus 321 --~~~~--T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--G~Gl~~gie~~~~ 391 (460)
T PRK12403 321 --AHGL--TYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQ--GAGLVAALQFAED 391 (460)
T ss_pred --ccCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEe--ecceEEEEEEccC
Confidence 0111 33467777788888898888765 344554 6777777777664 333333211 1333455544211
Q ss_pred -C-----C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 -I-----N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 -~-----~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. . ...+.+.+.+ .|+.+.+. ++.+|+++.-..+++|+.
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-----~~~~~l~Ppl~it~~eid 440 (460)
T PRK12403 392 KATRKRFANENDLAWRCRTIGFE-EGVIIRST-----LGRMIMAPALVAGRAEID 440 (460)
T ss_pred ccccccccchhHHHHHHHHHHHh-CCEEEEec-----CCEEEEECCCCCCHHHHH
Confidence 0 1 1123344444 49988642 245899887766655443
No 350
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=2.4e-13 Score=114.54 Aligned_cols=301 Identities=21% Similarity=0.201 Sum_probs=196.8
Q ss_pred CChHHHHHHHccCCCCC--CCC-cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-----C-C--C-CCe
Q 017726 19 HIPDQVIRAMNRNNEDY--RSP-AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-----L-S--P-GDR 86 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~~--~~~-~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-----~-~--~-gd~ 86 (367)
.-.+.++++++++...- .+. .+.+...++.+.+.++++.+. ++-++.|.+|.+.++... . . | ...
T Consensus 75 hchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~k---vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka 151 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYDK---VLPMNTGAEAVETACKLARKWGYRKKNIPKNKA 151 (427)
T ss_pred CCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcce---eeecccchhHHHHHHHHHHHHHHhhccCCccce
Confidence 44677888888865531 111 245778899999999999766 788899999999877531 1 1 2 223
Q ss_pred EEEEeCCcchHH-HH--------HHHHHhCC----ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc
Q 017726 87 IISFLIGQFSLL-WI--------DQQQRLNF----NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT 153 (367)
Q Consensus 87 vl~~~~~~~~~~-~~--------~~~~~~g~----~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~ 153 (367)
+++...+.|.-+ .. ..-+..|- .+..||.+ |.++++.++++ ++.+.+++...+--.|.+
T Consensus 152 ~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~---~~vaaFivEPIQGEaGVv 223 (427)
T KOG1402|consen 152 KILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKS---PNVAAFIVEPIQGEAGVV 223 (427)
T ss_pred eEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcC---CCeeEEEeeccccccceE
Confidence 343333333222 10 00111221 13334433 78999999986 688999999999999999
Q ss_pred cc----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhc
Q 017726 154 NN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASK 223 (367)
Q Consensus 154 ~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~ 223 (367)
.| +++++++|++ ||+++|.|+.|+..+. ..+..+...|+++. .|.++|. ...+.+.+++++.-.+.
T Consensus 224 vP~~GYL~~vreLCtk--ynvl~I~DEvQTGl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl~~~~im~~~~ 299 (427)
T KOG1402|consen 224 VPPPGYLKKVRELCTK--YNVLLIADEVQTGLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLADDDIMLNIK 299 (427)
T ss_pred eCCchhHHHHHHHHHh--hcEEEEehhhhhcccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEecHHHHhccC
Confidence 86 8899999999 9999999999976543 45667777899887 5777664 33577778888866666
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCcc-ccCC
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKN-CTQK 300 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~-~~~~ 300 (367)
+... |. .+.-|.++....-++++.+.++ ...++...+...|+.+|.++ .++- +..-
T Consensus 300 pgeH----------------gs--TyggNpLg~~vaiAalevi~ee---kL~era~~lG~~l~~~L~~l~~~~p~~v~~V 358 (427)
T KOG1402|consen 300 PGEH----------------GS--TYGGNPLGCAVAIAALEVIVEE---KLVERAAKLGEILRDQLNKLQKKFPHVVKEV 358 (427)
T ss_pred CCcc----------------cc--ccCCChHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhccccccchhhee
Confidence 5432 21 2235566666777788888776 55668888999999999887 3311 2211
Q ss_pred CccCCCceEEEEc-C---CCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHHHh
Q 017726 301 EEWFSDTVTAVIV-P---SHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFNFQ 362 (367)
Q Consensus 301 ~~~~~~~~~~~~~-~---~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~ 362 (367)
.. + +.+..+.+ | ++.++.++|-.|++. |+...| ..+..||+.+--.++++|+...
T Consensus 359 RG-r-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~-g~LAkp----tH~~IiRfaPPL~I~e~dl~eg 417 (427)
T KOG1402|consen 359 RG-R-GLLNAIVINPSKTSGQDAWDVCLALKEN-GLLAKP----THGNIIRFAPPLVISEEDLREG 417 (427)
T ss_pred ec-c-ceEEEEEeccccccchhHHHHHHccccc-ccccCC----CCCCeEEecCCcccCHHHHHHH
Confidence 10 1 22222222 1 235677888888654 776543 3467899998778877776543
No 351
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.61 E-value=2.7e-12 Score=119.57 Aligned_cols=308 Identities=13% Similarity=0.114 Sum_probs=178.7
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCC-C-CceEEecCChhHHHHHHHHcc--CCCCCeEEEEeC
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT-S-GTPFLIPTTGTGAWESALTNT--LSPGDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~-~-~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~ 92 (367)
++++.+++.++... +......+...++.++|.++.... . ...+.+++||++|+..++... .....+|+....
T Consensus 57 ~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~ 136 (442)
T TIGR00709 57 HPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSG 136 (442)
T ss_pred CHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 45566666664332 211122355667777787776432 1 122455689999999988642 233457888888
Q ss_pred CcchHHHHHHHHH------hC-----CceEEEeCCCCCCC--------CH----HHHHHHHhc---cCCCCccEEEEEec
Q 017726 93 GQFSLLWIDQQQR------LN-----FNVDVVESDWGEGA--------KL----DVLASKLAA---DTAHTIKAICIVHN 146 (367)
Q Consensus 93 ~~~~~~~~~~~~~------~g-----~~~~~v~~~~~~~~--------d~----e~l~~~i~~---~~~~~~~lv~~~~~ 146 (367)
+|++......+.. .+ ..+..++.+..... +. +.+++.+.+ .. .++.+|++...
T Consensus 137 ~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~iaavi~Epi 215 (442)
T TIGR00709 137 GFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGV-DKPAAVILEAI 215 (442)
T ss_pred CcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCC-CceEEEEEccc
Confidence 8888642111110 11 11333333221111 11 123344431 11 35788888888
Q ss_pred CCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee---e--ccccccceEEEecCCCcccCCCcceeeeeCHH
Q 017726 147 ETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID---F--RMDEWGIDVALTGSQKALSLPTGMGIVCASPK 217 (367)
Q Consensus 147 ~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---~--~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~ 217 (367)
.+..|.+.+ +++++++|++ +|+++|.||++...... + .......|+++. +|.+++...+|.++++++
T Consensus 216 ~g~~G~~~~~~~yl~~lr~lc~~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~Pigav~~~~~ 291 (442)
T TIGR00709 216 QGEGGVVAAPSEWLQKIREVTRK--HDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLPLAVLLIAPE 291 (442)
T ss_pred cCCCCCccCCHHHHHHHHHHHHH--cCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEE--cccccCCcccEEEEEchH
Confidence 887787753 7889999999 99999999998643221 1 112234788885 788876555799999888
Q ss_pred HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc
Q 017726 218 ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK 295 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~ 295 (367)
.+.+.... . +. .+..+...+++..++++.+.+++ ..++.+++.++|.+.|+++ .++
T Consensus 292 -~~~~~~~~---------------~-~~--T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~ 349 (442)
T TIGR00709 292 -FDAWQPAG---------------H-TG--TFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHP 349 (442)
T ss_pred -HhccCCCc---------------C-CC--CCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 44442110 0 11 33566767777788888877765 3447777888888888874 344
Q ss_pred cccCCCccCCCceEEEEcCCCC--------------CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 296 NCTQKEEWFSDTVTAVIVPSHI--------------NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
++..-. -.+.++.+.+.+.. -...+.+.+.+ +||.+.+.. ..++.+|+.+....+++++.
T Consensus 350 ~v~~vr--G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~--~~~~~l~~~Ppl~it~~ei~ 423 (442)
T TIGR00709 350 CIGNVR--GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFE-NGLLLETGG--REGEVFRLLCPITIDQEECE 423 (442)
T ss_pred Ceeeee--ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHH-CCeEEeecC--CCCCEEEEECCCCCCHHHHH
Confidence 333211 13335555552210 02346666654 599886531 12578999877766665544
No 352
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=1.8e-12 Score=120.98 Aligned_cols=311 Identities=14% Similarity=0.070 Sum_probs=185.4
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEE
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl 88 (367)
.+++.+++.++... .......+...++.+++.++.... .+.+.|++||++|++.++.... ....+|+
T Consensus 65 ~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii 143 (466)
T PRK07030 65 NPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPG-LSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFV 143 (466)
T ss_pred CHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEE
Confidence 45566666554322 111122355667777787766422 2469999999999999886431 1235688
Q ss_pred EEeCCcchHHHHHHHHHhCC------------ceEEEeCCCCCC------------CCHHHHHHHHhccCCCCccEEEEE
Q 017726 89 SFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
....+|++....... ..+. .+..+|.+.... -+++.+++.+.+.. +++.+|++.
T Consensus 144 ~~~~~yHG~t~ga~s-~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~-~~iAAvi~E 221 (466)
T PRK07030 144 TLTNSYHGETLAAMS-VGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHH-DEIAAVIVE 221 (466)
T ss_pred EECCCcCcccHHHHh-ccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-CceEEEEEe
Confidence 888888875421111 1111 122333222110 12466777776544 567888888
Q ss_pred e-cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-Ccceeee
Q 017726 145 H-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (367)
Q Consensus 145 ~-~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~ 213 (367)
. .....|.+.+ +++++++|++ +|+++|.||.+...... ........|++++ .|.++|. ..+|.++
T Consensus 222 P~iqg~gG~~~~~~~yl~~lr~lc~~--~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~ 297 (466)
T PRK07030 222 PLIQGAGGMRMYHPVYLKLLREACDR--YGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCL--SKALTGGYLPLAAVL 297 (466)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHH--cCCEEEEeehhhCcCccccchHHHhcCCCCCEEee--ehhccCCcccceEEE
Confidence 7 4677787765 7789999999 99999999997633211 1222345788888 6888766 2579999
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+........ .+..+. .++.+...+++..++++.+.+++ +.++..++.++|.+.|+++
T Consensus 298 ~~~ei~~~~~~~~~~~~---------~~~h~~--T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~ 363 (466)
T PRK07030 298 TTDTVYQAFYDDYPTLR---------AFLHSH--SYTGNPLACAAALATLDIFEQDN---VIENNRALARRMAEATAHLA 363 (466)
T ss_pred ecHHHHHHHhccccccc---------ccccCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHh
Confidence 99998876642100000 000121 33466777788888888888765 4457778888888888876
Q ss_pred CCccccCCCccCCCceEEEEcCCCC--------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSHI--------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
..+.+..-. -.+.++.+.+.++. + ...+.+.+.++ |+.+.+. +..+|+.+....+++|+.
T Consensus 364 ~~~~v~~vr--G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~-----g~~i~~~Ppl~it~~eid 434 (466)
T PRK07030 364 DHPHVAEVR--QTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALER-GALLRPL-----GSVVYFLPPYVITPEQID 434 (466)
T ss_pred cCCCEEEeE--eceeEEEEEeccCccccccCcchhHHHHHHHHHHHHC-CeEEEec-----CCEEEEECCccCCHHHHH
Confidence 333222111 13334555442111 0 13567777654 9988642 357999866666655443
No 353
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=2.7e-12 Score=119.84 Aligned_cols=311 Identities=14% Similarity=0.091 Sum_probs=184.6
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEE
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl 88 (367)
++++.+++.++... .......+...++.+.|++++...- +.+.|++||++|++.++.... .+ ..+|+
T Consensus 74 ~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii 152 (460)
T PRK06916 74 VPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGL-KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFV 152 (460)
T ss_pred CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 55566666554332 1111123445678888887764321 369999999999999886422 12 35788
Q ss_pred EEeCCcchHHHHHHHHHhC------------CceEEEeCCCCCC------------CCHHHHHHHHhccCCCCccEEEEE
Q 017726 89 SFLIGQFSLLWIDQQQRLN------------FNVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
....+|++...... ...+ ..+..+|.+.... -+++.+++.+++.. +++.+|++.
T Consensus 153 ~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~iAAvi~E 230 (460)
T PRK06916 153 TLKNAYHGDTIGAV-SVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKH-EEIAAIIVE 230 (460)
T ss_pred EECCcCCcccHHhH-hccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCC-CcEEEEEEe
Confidence 88888888532111 1111 1123343321100 13456777776543 567888888
Q ss_pred e-cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-Ccceeee
Q 017726 145 H-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVC 213 (367)
Q Consensus 145 ~-~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~ 213 (367)
. +....|.+.+ +++++++|++ +|+++|.||++...... ........|+++. .|.++|. ..+|.++
T Consensus 231 P~iqg~gG~~~~~~~fl~~lr~lc~~--~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~ 306 (460)
T PRK06916 231 PLVQGAGGMITMPKGYLKGLRNLCTK--YNVLFITDEVATGFGRTGKMFACEHENVTPDIMTA--GKGLTGGYLPIAITV 306 (460)
T ss_pred ccccCCCCcccCCHHHHHHHHHHHHH--cCCEEEeechhhCCCcCchhhHHHhcCCCCCeeee--ehhhhcCccccceee
Confidence 7 5777787764 7789999999 99999999997633211 1222335788865 7888765 3579999
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+....... ..+..+. .++.+...+++..++++.+.+++ ..++..++.+++.+.|+++
T Consensus 307 ~~~ei~~~~~~~~~~~---------~~~~~~~--T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~l~~l~ 372 (460)
T PRK06916 307 TTDEIYNAFYGDYEEQ---------KTFFHGH--SYTGNPLGCAVALANLELYEKTN---LIEQVARKTEYVATQLEDLF 372 (460)
T ss_pred ecHHHHHHhhcccccc---------CccccCC--CCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhh
Confidence 9999877664211000 0000111 33456666778888888887765 4457788888888888876
Q ss_pred CCccccCCCccCCCceEEEEcCCCC--------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSHI--------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
....+..-. -.+.++.+.+.+.. + ...+.+.+.+ .||.+.+. ++.+|+.+....+++|+.
T Consensus 373 ~~~~v~~vr--G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~-~Gvl~~~~-----g~~l~~~Ppl~it~~~id 443 (460)
T PRK06916 373 ALKHVGDIR--QLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRE-LGMLTRPL-----GNTIVFMPPLASTIDELD 443 (460)
T ss_pred cCCCeEEee--cCCceeeEEeecccccccCCCchhhHHHHHHHHHHH-CCeEEEec-----CCEEEEeCCcccCHHHHH
Confidence 333222111 12234444441110 1 2357777765 49998652 357999866666655443
No 354
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=1.7e-12 Score=121.13 Aligned_cols=311 Identities=15% Similarity=0.087 Sum_probs=182.5
Q ss_pred hHHHHHHHccCCCC--C--CCCcHHHHHHHHHHHHHHHhcCC----CCceEEecCChhHHHHHHHHccC-------CC-C
Q 017726 21 PDQVIRAMNRNNED--Y--RSPAVPALTKTLLEDIKKIFKTT----SGTPFLIPTTGTGAWESALTNTL-------SP-G 84 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~~~~~~~~~~~~~~la~~~~~~----~~~~v~~~~ggt~al~~~~~~~~-------~~-g 84 (367)
.+++.+++.++... + ......+...++-+.+.+.+... ..+.+.|++||++|+..++.... .+ .
T Consensus 82 ~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r 161 (472)
T PRK08742 82 EPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRR 161 (472)
T ss_pred CHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCC
Confidence 45566666664321 1 11112244567777777776421 22469999999999999886421 12 3
Q ss_pred CeEEEEeCCcchHHHHHHHHHhCC------------ceEEEeCCCCCC------------CCHHHHHHHHhccCCCCccE
Q 017726 85 DRIISFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEG------------AKLDVLASKLAADTAHTIKA 140 (367)
Q Consensus 85 d~vl~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~d~e~l~~~i~~~~~~~~~l 140 (367)
.+|+....+|++......+. .+. .+..++.+.... .+++.+++.+.... +++.+
T Consensus 162 ~~ii~~~~syHG~t~gals~-~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~iAA 239 (472)
T PRK08742 162 TRFIALENGYHGETIGALAV-GDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSP-GEICA 239 (472)
T ss_pred cEEEEECCCcCCCchhhhhc-cCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCC-CceEE
Confidence 57888888888854211111 111 123343322111 12466777776433 46778
Q ss_pred EEEEe-cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cc
Q 017726 141 ICIVH-NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GM 209 (367)
Q Consensus 141 v~~~~-~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~ 209 (367)
|++.. .....|.+.+ +++++++|++ +|+++|.||.+...... +.......|+++. .|.++|.. .+
T Consensus 240 vI~EPviqg~gG~~~~p~~fl~~lr~lc~~--~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~gG~~Pl 315 (472)
T PRK08742 240 LILEPRLQCAGGMRMHHPAYLRRARELCDA--HGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCL--SKGLTGGFLPL 315 (472)
T ss_pred EEEccccccCCCcccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCCCccchHHHhcCCCCCEEEE--cccccCCCCCc
Confidence 88887 4677787664 7789999999 99999999997643221 2222335788887 68887652 47
Q ss_pred eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Q 017726 210 GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAV 289 (367)
Q Consensus 210 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L 289 (367)
|.+++++++.+.+........ +..+. .++.+...+++..++++.+.++++ .++..+..+++.+.+
T Consensus 316 aav~~~~ei~~~~~~~~~~~~----------~~h~~--T~~gnpl~~Aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~~ 380 (472)
T PRK08742 316 SAVLATQQLYDAFLDDSRERA----------FLHSH--SYTGNPLACAAALATLDIFADDDV---IARNQPTAARMTQLA 380 (472)
T ss_pred ceeeccHHHHHHhhccCccCc----------cCcCC--CCCccHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHH
Confidence 999999998776642110000 00121 344667777888888999888764 334555566666555
Q ss_pred HHc-CCccccCCCccCCCceEEEEcCCCC------C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH
Q 017726 290 EAW-GLKNCTQKEEWFSDTVTAVIVPSHI------N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 290 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
+.. .+.++..-. -.+.++.+.+.... + ...+.+.+.++ ||.+.+. ++.||+.+....+++
T Consensus 381 ~~~~~~~~i~dvR--G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----g~vi~~~PpL~it~~ 452 (472)
T PRK08742 381 AQIGEHPHVADVR--QAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR-GVVLRPL-----GDVLYWMPPYCVDEA 452 (472)
T ss_pred HHHhcCCCeeeEe--ccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC-CeEEEec-----CCEEEEECCCCCCHH
Confidence 554 333332211 23344555542111 1 13466667654 9998652 368999887777665
Q ss_pred HHH
Q 017726 358 MFN 360 (367)
Q Consensus 358 ~~~ 360 (367)
++.
T Consensus 453 ei~ 455 (472)
T PRK08742 453 QLA 455 (472)
T ss_pred HHH
Confidence 543
No 355
>PRK07046 aminotransferase; Validated
Probab=99.60 E-value=1.2e-12 Score=121.81 Aligned_cols=242 Identities=16% Similarity=0.073 Sum_probs=151.3
Q ss_pred HHHHHHHccCCCCCC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHH
Q 017726 22 DQVIRAMNRNNEDYR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLL 98 (367)
Q Consensus 22 ~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~ 98 (367)
+.+.+++.+...... .....+...++.+.|.+.++ .+.+.|++|||+|+..+++.. ....++|+....+|++..
T Consensus 94 p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~---~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~ 170 (453)
T PRK07046 94 APVARALAEQARRGLTTMLPSEDAAWVGEELARRFG---LPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTV 170 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC---CCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCc
Confidence 556666655433211 11123555677888888774 245999999999999988642 234567888888788852
Q ss_pred -HHHHHHHhC----------C------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 99 -WIDQQQRLN----------F------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 99 -~~~~~~~~g----------~------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
+.......+ . .+..++. -|++.+++.+.. .++.+|++.......|.+.| ++
T Consensus 171 d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~---~~vAavi~EPi~g~~G~~~p~~~fl~ 242 (453)
T PRK07046 171 DDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALAD---GDVAAVLAEPAMTNIGMVLPEPGFHE 242 (453)
T ss_pred HHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhCC---CCeEEEEECCCCCCCCCcCCCHHHHH
Confidence 111110011 1 0111111 278999998853 46788888888777788776 78
Q ss_pred HHHHHHHhcCCCcEEEEeeeec----cCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeec
Q 017726 158 KVRKLLDEYRHPALFLVDGVSS----ICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFD 233 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~----~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
+++++|++ +|+++|.||+++ .+.. ........|++++ .|.++|...+|.+++++++.+.+..........
T Consensus 243 ~lr~lc~~--~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t~--gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~- 316 (453)
T PRK07046 243 ALRELTRR--YGTLLVIDETHTISSGPGGY-TRAHGLEPDFLVV--GKPIAGGVPCAVYGFSAELAERAQAAKASAPPG- 316 (453)
T ss_pred HHHHHHHH--hCCEEEEEccccCccCCcch-hHHhCCCccceee--hhhhcCCCcceeeeehHHHHHHHhhccccCCCC-
Confidence 99999999 999999999985 3321 1111234788765 899987655899999999988775321100000
Q ss_pred hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Q 017726 234 WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (367)
.....+ .+..+...+++..++++.+.+.+ ..++..+..++|++.|++
T Consensus 317 -----~~~~~~---T~~gnpl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 317 -----HSGIGT---TLSANALAMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRA 363 (453)
T ss_pred -----CceeCC---CCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHH
Confidence 000112 33466767777888888876654 355666677777777765
No 356
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=6.3e-13 Score=123.84 Aligned_cols=242 Identities=16% Similarity=0.091 Sum_probs=151.7
Q ss_pred hHHHHHHHccCCCCCCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchH
Q 017726 21 PDQVIRAMNRNNEDYRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSL 97 (367)
Q Consensus 21 ~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~ 97 (367)
++.+.+++.++...... ....+...++-+.+.+.+.. .+.+.|++|||+|++.++... ....++|+....+|++.
T Consensus 117 ~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~--~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~ 194 (474)
T PLN02482 117 DDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS--VEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGH 194 (474)
T ss_pred CHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC--CCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCC
Confidence 35666666664432111 11224455677777776642 346999999999999988642 23346788887778874
Q ss_pred H-HHHHHHHhC-----------C------ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----
Q 017726 98 L-WIDQQQRLN-----------F------NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN---- 155 (367)
Q Consensus 98 ~-~~~~~~~~g-----------~------~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~---- 155 (367)
. +.......+ . .+..++. -|++++++.+.++. .++.+|++.......|.+.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~-~~iAavI~Epv~g~~G~i~p~~~f 268 (474)
T PLN02482 195 ADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANK-GEIAAVILEPVVGNSGFIVPKKEF 268 (474)
T ss_pred cchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCC-CceEEEEECCCCCCCCCcCCCHHH
Confidence 2 111000001 0 0111111 17899999887654 46788888888888898876
Q ss_pred HHHHHHHHHhcCCCcEEEEeeeeccCcee----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee
Q 017726 156 LSKVRKLLDEYRHPALFLVDGVSSICAID----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF 231 (367)
Q Consensus 156 ~~~i~~~~~~~~~~~~vi~D~~~~~~~~~----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 231 (367)
+++++++|++ +|+++|+||++...-.. ........|++++ .|.++|...+|.+++++++.+.+... ...+
T Consensus 269 l~~lr~lc~~--~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~ei~~~~~~~--~~~~ 342 (474)
T PLN02482 269 LEGLREITKE--NGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRREIMEMVAPA--GPMY 342 (474)
T ss_pred HHHHHHHHHH--cCCEEEEeccccCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcHHHHHhhccC--CCcc
Confidence 5589999999 99999999998532111 0111224677654 89997654578889999998877521 0001
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
. .+ .+..+...+++..++|+.+++.+ ..++..++.++|++.|+++
T Consensus 343 ~----------~~---T~~gnpl~~aAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 343 Q----------AG---TLSGNPLAMTAGIHTLKRLQQPG---TYEYLDKITKKLIQGILEA 387 (474)
T ss_pred c----------cc---CcchhHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHH
Confidence 1 12 22355666677777888886653 4557777788888888765
No 357
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.2e-12 Score=113.23 Aligned_cols=318 Identities=15% Similarity=0.084 Sum_probs=196.6
Q ss_pred ccccCCCCCChHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHh-cCCC----Cce--EEecCChhHHHHHHHHcc-
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIF-KTTS----GTP--FLIPTTGTGAWESALTNT- 80 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~-~~~~----~~~--v~~~~ggt~al~~~~~~~- 80 (367)
|.+--|-+++-++|.+|-+..... ...|-...+..++.+.+++++ |.+. ..+ -+-|.|||+|+..+...+
T Consensus 36 Y~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~ 115 (396)
T COG1448 36 YKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLA 115 (396)
T ss_pred eeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHH
Confidence 445567778888888777765443 334555566677777777754 5331 112 267789999999876543
Q ss_pred -CCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH
Q 017726 81 -LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW--GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS 157 (367)
Q Consensus 81 -~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~ 157 (367)
..+...|-+++|.+..+. .+.+..|.++...+.-+ ...+|.+.+.+.++.-+ ++.-+++-...|||||.-++.+
T Consensus 116 ~~~~~~~vwis~PtW~NH~--~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~-~~~vvLLH~CcHNPTG~D~t~~ 192 (396)
T COG1448 116 RFFPDATVWISDPTWPNHK--AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP-EGSVVLLHGCCHNPTGIDPTEE 192 (396)
T ss_pred HhCCCceEEeCCCCcHhHH--HHHHhcCCceeeeeccccccccccHHHHHHHHHhCC-CCCEEEEecCCCCCCCCCCCHH
Confidence 456667999999665543 44567899998887632 34589999988888754 3444455566789999887655
Q ss_pred ---HHHHHHHhcCCCcEEEEeeeeccCceeeccc--------ccc-ceEEEecCCCcccCCCc--c---eeeeeCHHHHH
Q 017726 158 ---KVRKLLDEYRHPALFLVDGVSSICAIDFRMD--------EWG-IDVALTGSQKALSLPTG--M---GIVCASPKALE 220 (367)
Q Consensus 158 ---~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~--------~~~-~d~~~~s~~K~~~g~~g--~---g~~~~~~~~~~ 220 (367)
+|.++.++ .+.+.+.|-+|-.+.--++-+ ..+ --++..|++|.|+ ..| + .++.-+++...
T Consensus 193 qW~~l~~~~~~--r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg-LYgERVGa~~vva~~~~~a~ 269 (396)
T COG1448 193 QWQELADLIKE--RGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG-LYGERVGALSVVAEDAEEAD 269 (396)
T ss_pred HHHHHHHHHHH--cCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh-hhhhccceeEEEeCCHHHHH
Confidence 46666676 999999998875332212111 111 2588889999984 544 3 34444555555
Q ss_pred HhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHH------HHHHhChHHHHHHHHHHHHHHHHHHHHc--
Q 017726 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALD------LIFEEGLENVIERHRRLGKATRLAVEAW-- 292 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~------~~~~~g~~~~~~~~~~~~~~l~~~L~~~-- 292 (367)
++... .+..--+. ..+|+..+.......|. .++++ +..+++++.+.+..|.+.|++.
T Consensus 270 ~v~sq------------lk~~iR~~--ySnPP~~Ga~vva~IL~~p~Lra~W~~E-l~~Mr~Ri~~mR~~lv~~L~~~~~ 334 (396)
T COG1448 270 RVLSQ------------LKAIIRTN--YSNPPAHGAAVVATILNNPELRAEWEQE-LEEMRQRILEMRQALVDALKALGA 334 (396)
T ss_pred HHHHH------------HHHHHHhc--cCCCchhhHHHHHHHhCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCC
Confidence 44421 01111111 11344443333332222 12222 7889999999999999999994
Q ss_pred --CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCC-CCHHHHHHhhhhc
Q 017726 293 --GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH-LNEVMFNFQLLFQ 366 (367)
Q Consensus 293 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~-~~~~~~~~~~l~~ 366 (367)
.+..+.. +.+ ++++ .|.+.++ +++|+++++|++... + ||+..+- ....+-..+.|.+
T Consensus 335 ~~~f~~i~~----Q~G-MFsy---~Gls~~Q-V~rLree~~IY~v~s------G--Ri~vaGl~~~ni~~va~ai~~ 394 (396)
T COG1448 335 PRNFDFIIS----QRG-MFSY---TGLSPEQ-VDRLREEFGIYLVAS------G--RINVAGLNTSNIDYVAKAIAA 394 (396)
T ss_pred CcccchHhh----cCc-eeec---CCCCHHH-HHHHHHhccEEEecC------C--eeeeccCChhhHHHHHHHHHh
Confidence 3556654 343 4433 2566554 477889999988631 1 8887773 4456666665543
No 358
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.60 E-value=7.4e-13 Score=119.16 Aligned_cols=285 Identities=18% Similarity=0.147 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CCC-CeEEEEeCCcchHHHHHHHHHhC--------
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SPG-DRIISFLIGQFSLLWIDQQQRLN-------- 107 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~g-d~vl~~~~~~~~~~~~~~~~~~g-------- 107 (367)
..++-++|+++..-..-+.|.|++|||+|++.++.-.+ +|. .++|.-..+|++..+..++ ..|
T Consensus 89 a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~S-v~g~~~~~~~~ 167 (449)
T COG0161 89 AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMS-VGGPVALRHAF 167 (449)
T ss_pred HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchhee-ccCchhhhhhh
Confidence 56888888888874323569999999999999886321 232 3488888888886432111 111
Q ss_pred -----CceEEEeCCCC--------CC----CCHHHHHHHHhccCCCCccEEEEEecCCC-cccccc----HHHHHHHHHh
Q 017726 108 -----FNVDVVESDWG--------EG----AKLDVLASKLAADTAHTIKAICIVHNETA-TGVTNN----LSKVRKLLDE 165 (367)
Q Consensus 108 -----~~~~~v~~~~~--------~~----~d~e~l~~~i~~~~~~~~~lv~~~~~~n~-tG~~~~----~~~i~~~~~~ 165 (367)
..+..++.+.. +. -..++|+++|.++.+++..++++...-.- .|.++| +++++++|++
T Consensus 168 ~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~k 247 (449)
T COG0161 168 YDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDK 247 (449)
T ss_pred ccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHH
Confidence 12223333321 11 23578889998876567888888887776 777765 7899999999
Q ss_pred cCCCcEEEEeeeeccCcee---e--ccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHHH
Q 017726 166 YRHPALFLVDGVSSICAID---F--RMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIK 239 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~---~--~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
|||++|.||.-..+... + .......|+++. .|.+.|. ..+|.+++++++.+.+..... .
T Consensus 248 --y~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~--aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~-~---------- 312 (449)
T COG0161 248 --YGILLIADEVATGFGRTGKMFACEHAGIVPDILCL--AKGLTGGYLPLSAVLTSDRIYEAFSDGDA-G---------- 312 (449)
T ss_pred --cCcEEEeecceeCCCcCchhhhhhhcCCCCCeeee--cccccccchhhHhHhhhHHHHHHHhcccC-C----------
Confidence 99999999986433221 1 112234688876 5777553 337889999999888775421 1
Q ss_pred HhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-c-CCccccCCCccCCCceEEEEcCCCC
Q 017726 240 FYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA-W-GLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
.|..|. .++.+..++++..+.|+.++++++ .++.++...+|.+.|++ + +.+.+..-. ..+.+..+.+..+.
T Consensus 313 ~f~HG~--TYsghPlacAaAla~L~i~e~e~l---~~~~~~~~~~l~~~L~~~l~~~p~VgdVR--~~Gli~~iElv~d~ 385 (449)
T COG0161 313 AFMHGH--TYSGNPLACAAALANLDILEEEDL---LERVAEIGAYLQAGLQAALADHPLVGDVR--GLGLIGAIELVADK 385 (449)
T ss_pred eeccCC--ccccCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHhcccCCcEEEee--ccceEEEEEEeccc
Confidence 122243 456777777777778888888764 44677888999999987 3 444444311 23445555553332
Q ss_pred C---------HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHH
Q 017726 318 N---------SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 318 ~---------~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~ 357 (367)
+ ...+.+.+.++ |+.++|. +..+=+++-...+.+
T Consensus 386 ~t~~~f~~~~~~~~~~~~~e~-Gl~iRp~-----g~~i~~~PPliit~~ 428 (449)
T COG0161 386 ATKTPFEARVGARVRAAALER-GLLIRPL-----GDVIYLMPPLIITRE 428 (449)
T ss_pred ccccchhhhHHHHHHHHHHHC-CeEEeec-----CCEEEEcCCccCCHH
Confidence 2 34566666555 9999985 345666554444444
No 359
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.60 E-value=9.4e-16 Score=133.40 Aligned_cols=247 Identities=19% Similarity=0.158 Sum_probs=56.9
Q ss_pred CCCCCChHHHHHHHccCCCCCC--CCc-----HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeE
Q 017726 15 PGPVHIPDQVIRAMNRNNEDYR--SPA-----VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRI 87 (367)
Q Consensus 15 ~~p~~~~~~v~~a~~~~~~~~~--~~~-----~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~v 87 (367)
=|-.++++++++++.+...++. -++ ....+..+.+.++.+.|+++ .+++++...|+.+++.++. +|.+|
T Consensus 13 LGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltgAea---A~VvNnnaAAv~L~l~~la-~~~Ev 88 (367)
T PF03841_consen 13 LGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTGAEA---ALVVNNNAAAVLLALNTLA-KGKEV 88 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc-ccccc
Confidence 3667788899999888544322 111 12334567777888888765 5677888899988887754 67788
Q ss_pred EEEeCCcc----hHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc--ccc--ccHHHH
Q 017726 88 ISFLIGQF----SLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--GVT--NNLSKV 159 (367)
Q Consensus 88 l~~~~~~~----~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t--G~~--~~~~~i 159 (367)
+++..+-. ++++.++.+..|+++++|-... +..+++++++|++ +|.+++-+|++|.. |.. .+++++
T Consensus 89 IvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t~~~Dye~AI~e----~Ta~ll~Vh~Sn~~i~GFt~~~~~~el 162 (367)
T PF03841_consen 89 IVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RTHLSDYEKAITE----NTAALLKVHTSNFRIQGFTGEVSLEEL 162 (367)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred cccccccccccccccccccccccccccccccccc--ccccccccccccc----cccccccccccccccccccccccHHHH
Confidence 88766322 2245567788899999887653 3468899999995 56899888887763 433 489999
Q ss_pred HHHHHhcCCCcEEEEeeeeccC---------cee--eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCC
Q 017726 160 RKLLDEYRHPALFLVDGVSSIC---------AID--FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSV 228 (367)
Q Consensus 160 ~~~~~~~~~~~~vi~D~~~~~~---------~~~--~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~ 228 (367)
.+++++ |++++++|..++.. ..+ -.....|+|++++|+.|-++||. .|+++++++++++++....
T Consensus 163 ~~la~~--~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~lI~~lk~~pl- 238 (367)
T PF03841_consen 163 AELAKE--HGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKELIEKLKKHPL- 238 (367)
T ss_dssp HHHHHH--HT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHHHHHHHHHHHH-
T ss_pred HHHHhh--cCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHHHHHHHhhCCC-
Confidence 999999 99999999876321 111 12234589999999999998877 5999999999998874210
Q ss_pred ceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhC-----------hHHHHHHHHHHHHHHHHHHHHc
Q 017726 229 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEG-----------LENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g-----------~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
++ ..-..-..++++.++++.+.+.. +.+..+.+++.++.+.+.|+..
T Consensus 239 ---------------~R--alrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 239 ---------------GR--ALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp ---------------TT--T-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred ---------------cc--eEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 11 11244456688888888766311 2223344455566666666553
No 360
>PRK07036 hypothetical protein; Provisional
Probab=99.59 E-value=3.2e-12 Score=119.48 Aligned_cols=290 Identities=16% Similarity=0.119 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeEEEEeCCcchHHHHHHHHHhC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRIISFLIGQFSLLWIDQQQRLN------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (367)
+...++.++|.+..... .+.+.|++||++|++.++.... . + ..+|+....+|++..+... ...+
T Consensus 95 ~~~~~lae~L~~~~p~~-~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~-s~~~~~~~~~ 172 (466)
T PRK07036 95 APAAELAAKLAELAPGD-LNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTA-SLTGKAADRT 172 (466)
T ss_pred HHHHHHHHHHHHhCCCC-cCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhh-cccCCCcccc
Confidence 44567777777775332 2469999999999999886421 1 2 3578888888887542111 1111
Q ss_pred ------CceEEEeCCCC----CCCC--------HHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHh
Q 017726 108 ------FNVDVVESDWG----EGAK--------LDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDE 165 (367)
Q Consensus 108 ------~~~~~v~~~~~----~~~d--------~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~ 165 (367)
..+..++.+.. ...+ .+.+++.+.+...+++.+|++.......|.+.| +++++++|++
T Consensus 173 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~ 252 (466)
T PRK07036 173 EFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRR 252 (466)
T ss_pred cccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 11233332211 0111 244556665322256789999988888898876 8899999999
Q ss_pred cCCCcEEEEeeeeccCcee---ec---cccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 166 YRHPALFLVDGVSSICAID---FR---MDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 166 ~~~~~~vi~D~~~~~~~~~---~~---~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
||+++|+||+++..... +- ......|+++. +|.+++. ..+|.+++++++.+.+.........
T Consensus 253 --~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~------- 321 (466)
T PRK07036 253 --YDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITF--AKGLTSGYQPLGAVIISERLLDVISGPNAKGNV------- 321 (466)
T ss_pred --cCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEE--ccccccCccccEEEEEcHHHHHHHhcccCcCcc-------
Confidence 99999999998533221 11 12235788766 7888765 2479999999998776531110000
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPSHI 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 317 (367)
+..+. .++.+...+++..++++.+++.+ +.++..++.++|++.|+++ ..+++..-. -.+.++.+.+.+..
T Consensus 322 --~~~~~--T~~gnpl~~aaa~a~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vr--G~Gl~~~ve~~~~~ 392 (466)
T PRK07036 322 --FTHGF--TYSGHPVACAAALKNIEIMEREG---LCEHVREVGPYFEERLASLRELPLVGDVR--GDHLMACVECVADK 392 (466)
T ss_pred --cccCC--CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhccCCCEEEEE--eeceEEEEEEccCc
Confidence 11121 33466767788888888887764 4556777888888888765 333222111 13345555552110
Q ss_pred --------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 318 --------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 318 --------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+ ...+.+.+.++ ||.+.+. ++.+|+++....+++|+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~-----~~~~~l~Ppl~it~~~i 439 (466)
T PRK07036 393 GSKALLPEDIAIGQRIDRHCQER-GLLVRPL-----EHLCVLSPPLIITRAQI 439 (466)
T ss_pred cccCCCCchhHHHHHHHHHHHHC-CcEEeec-----CCEEEEeCCCcCCHHHH
Confidence 0 23566677654 9988642 24689987665565544
No 361
>PRK06917 hypothetical protein; Provisional
Probab=99.59 E-value=1e-11 Score=115.67 Aligned_cols=314 Identities=12% Similarity=0.064 Sum_probs=182.5
Q ss_pred hHHHHHHHccCCCC--CC--CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEE
Q 017726 21 PDQVIRAMNRNNED--YR--SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRII 88 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl 88 (367)
.+++.+++.++... +. .....+...++.++|.+.+.... +.+.|++||++|++.++.... ....+|+
T Consensus 49 hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii 127 (447)
T PRK06917 49 VKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDL-NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKIL 127 (447)
T ss_pred CHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 45555555554332 11 11123455678888887764322 368999999999999887431 1235788
Q ss_pred EEeCCcchHHHHHHHHHhCC------------ceEEEeCCCCCC------------CCHHHHHHHHhccCCCCccEEEEE
Q 017726 89 SFLIGQFSLLWIDQQQRLNF------------NVDVVESDWGEG------------AKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~------------~~~~v~~~~~~~------------~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
....+|++....... ..+. .+..++.+.... -+++.+++.++++..+++.+|++.
T Consensus 128 ~~~~~yHG~t~~als-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~E 206 (447)
T PRK06917 128 SRWMSYHGITMGALS-MSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAE 206 (447)
T ss_pred EECCCcCCccHHHHH-hcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEe
Confidence 888888885421111 1111 112222211110 024567777765432357888888
Q ss_pred ecCCC-cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeee
Q 017726 145 HNETA-TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVC 213 (367)
Q Consensus 145 ~~~n~-tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~ 213 (367)
..... -|.+.| +++++++|++ +|+++|+||++...... ........|++++ +|.+++.. .+|.+.
T Consensus 207 Pi~g~~gG~~~p~~~fl~~lr~lc~~--~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~--gK~l~~G~~Pi~a~~ 282 (447)
T PRK06917 207 PIIGAAGAAVVPPKGYYKVIKEICDH--YDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTL--GKGLGAGYTPIAATV 282 (447)
T ss_pred ccccCcCceecCCHHHHHHHHHHHHH--cCCEEEEechhhCcCcccchhhHHhcCCCCCEEEe--eehhccCCcceEEEE
Confidence 76653 456654 7789999999 99999999997632211 1122234788766 78887653 479999
Q ss_pred eCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-
Q 017726 214 ASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW- 292 (367)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~- 292 (367)
+++++.+.+..... . +..+. .++.+...+++..++++.+.+++ +.++..++.++|.+.|+++
T Consensus 283 ~~~~i~~~~~~~~~-~-----------~~~~~--T~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~ 345 (447)
T PRK06917 283 VSDRVMEPILRGSR-S-----------IMSGH--TLSANPLSAATALAVLEYMEKHN---LPEKAAEKGEYLIKGLQKVQ 345 (447)
T ss_pred EcHHHHHHHhccCc-c-----------ccccc--CCCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHH
Confidence 99998776643110 0 00111 23456666788888888887764 4557777888888888775
Q ss_pred -CCccccCCCccCCCceEEEEcC-CC-----C-----CHHHHHHHHHhhCCeEEccCCC---CCCCcEEEEeecCCCCHH
Q 017726 293 -GLKNCTQKEEWFSDTVTAVIVP-SH-----I-----NSSEIVRRAWQRYNLSLGLGLN---KVAGKVFRIGHLGHLNEV 357 (367)
Q Consensus 293 -g~~~~~~~~~~~~~~~~~~~~~-~~-----~-----~~~~l~~~L~~~~gv~v~~g~~---~~~~~~iRi~~~~~~~~~ 357 (367)
...++..-. -.+.++.+.+- +. . -...+++.+.+ +||.+.+... ...++.+|+++.-..+++
T Consensus 346 ~~~~~i~~vr--G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~ 422 (447)
T PRK06917 346 QQSTIIGDVR--GKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAK-NGLLLYPAVAGQDGKEGDAVIIAPPMTITYS 422 (447)
T ss_pred hcCCCEEEEe--ecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHh-CCcEEEecccccCCCCCCEEEEECCCcCCHH
Confidence 233322111 13334444441 11 0 13456677765 4999976421 123568999877555555
Q ss_pred HHH
Q 017726 358 MFN 360 (367)
Q Consensus 358 ~~~ 360 (367)
|+.
T Consensus 423 eid 425 (447)
T PRK06917 423 ELD 425 (447)
T ss_pred HHH
Confidence 443
No 362
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.59 E-value=3.3e-12 Score=111.89 Aligned_cols=293 Identities=15% Similarity=0.085 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc---cCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeC
Q 017726 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN---TLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVES 115 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~---~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~ 115 (367)
.+..-++...++++.|.+=.. .-+-.++|.+=+.+..+ -..+..+++++..-|+... ....++..|+++..++.
T Consensus 119 LqaLfefQtlv~dLTGm~VAN-ASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~ 197 (450)
T COG0403 119 LEALFEFQTLVADLTGLDVAN-ASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA 197 (450)
T ss_pred HHHHHHHHHHHHHHhCCCccc-chhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc
Confidence 444667899999999998433 23336666544444433 2334678999888787765 44567778888888876
Q ss_pred CCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc-ccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceE
Q 017726 116 DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG-VTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDV 194 (367)
Q Consensus 116 ~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG-~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~ 194 (367)
+ |.++++++ ++ ..+..+++.+|+ ..| ...|+.++.+.+|. +|+++++=.---...+--+..++|+||
T Consensus 198 ~-----d~~~l~~~-~~---~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~--~~al~~v~aDplaL~LL~pPGe~GADI 265 (450)
T COG0403 198 D-----DLDDLESA-DD---GDVFGVLVQYPN-TFGIVEEDLRALIEAAHS--AGALVIVAADPLALGLLKPPGEFGADI 265 (450)
T ss_pred c-----hhhhhhhc-cc---cCeEEEEEecCC-CCCccchhHHHHHHHHhh--cCCEEEEEechhHhhccCCccccCCce
Confidence 6 78888888 43 246788888876 666 66679999999999 888877543322222222455679999
Q ss_pred EEecCCCcc----cCCCcceeeeeCHHHHHHhccCCCC---------ceeechHH--HHHHhhcCCccCCCCcHHHHHHH
Q 017726 195 ALTGSQKAL----SLPTGMGIVCASPKALEASKTAKSV---------RVFFDWKD--YIKFYNLGTFWPYTPSIQLLYGL 259 (367)
Q Consensus 195 ~~~s~~K~~----~g~~g~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~al 259 (367)
++++++..- .|.+.+|++.+++++.++++....+ .+.+.++. +-.|-+..| ++......+.|+
T Consensus 266 vvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKAT--SNICTnQaLlA~ 343 (450)
T COG0403 266 VVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKAT--SNICTNQALLAL 343 (450)
T ss_pred EEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccc--hhhhHHHHHHHH
Confidence 999988741 1223369999999998887765431 11122332 223334443 232333334444
Q ss_pred HHHHH--HHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 017726 260 RAALD--LIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 260 ~~al~--~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~ 335 (367)
.+++. ++...|++++.++..+++.+++++|++. |+++... .++.. +.++++. .....+.++.. ..|+-++
T Consensus 344 ~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt--~~v~~~~-~~~~~l~~~~~-~~G~~L~ 417 (450)
T COG0403 344 AASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDT--FTVRVPE-EVAEALLAAAI-AGGINLR 417 (450)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceee--EEEecch-hHHHHHHHHHH-hcCCcee
Confidence 44443 4567789999999999999999999975 5777764 22232 4566642 22344455443 3366555
Q ss_pred cCCCCCCCcEEEEeecCCCCHHH
Q 017726 336 LGLNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 336 ~g~~~~~~~~iRi~~~~~~~~~~ 358 (367)
.-. ...+-++..-..+.++
T Consensus 418 ~~~----~~~~~ia~tEt~t~~~ 436 (450)
T COG0403 418 RVD----ADTVLIALTETTTKED 436 (450)
T ss_pred eec----CCceEEEeecccCHHH
Confidence 322 2245555544444443
No 363
>PRK07483 hypothetical protein; Provisional
Probab=99.59 E-value=7.3e-12 Score=116.42 Aligned_cols=294 Identities=16% Similarity=0.126 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEEEEeCCcchHHHHHHHHH--------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRIISFLIGQFSLLWIDQQQR-------- 105 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl~~~~~~~~~~~~~~~~~-------- 105 (367)
+...++.++|.++..... +.+.|++||++|++.++.... .+ ..+|+....+|++.........
T Consensus 73 ~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~ 151 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL-EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREP 151 (443)
T ss_pred HHHHHHHHHHHHhCCCCC-CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccc
Confidence 445677777777664222 369999999999999886421 12 3468888888888632111110
Q ss_pred hC---CceEEEeCCCCCC-C------------CHHHHHHHHhccCCCCccEEEEEecCC-Ccccccc----HHHHHHHHH
Q 017726 106 LN---FNVDVVESDWGEG-A------------KLDVLASKLAADTAHTIKAICIVHNET-ATGVTNN----LSKVRKLLD 164 (367)
Q Consensus 106 ~g---~~~~~v~~~~~~~-~------------d~e~l~~~i~~~~~~~~~lv~~~~~~n-~tG~~~~----~~~i~~~~~ 164 (367)
.+ ..+..++...... . .++++++++.+...+++.+|++..... ..|.+.+ ++.++++|+
T Consensus 152 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~ 231 (443)
T PRK07483 152 FAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCD 231 (443)
T ss_pred cCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHH
Confidence 00 1122233221111 0 025666666532214677888887764 3476665 788999999
Q ss_pred hcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 165 EYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+ +|+++|.||++...... ........|+++. .|.++|.. .+|.+++++++.+.+.... .
T Consensus 232 ~--~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~~~~i~~~~~~~~--~--------- 296 (443)
T PRK07483 232 R--YGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTI--AKGLGAGYQPIGAVLASDRIYDAIADGS--G--------- 296 (443)
T ss_pred H--hCCEEEEecceeCcccCcHHHHHhhcCCCCCeeee--hhhhccCccccEEEEEcHHHHHHHhcCC--C---------
Confidence 9 99999999997643221 1122335788877 68887663 5799999999877665311 0
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
.+..+. .+..+...+++..++++.+++++ ..++..+..++|++.|+++ ..+.+..-. -.+.++.+.+.+.
T Consensus 297 -~~~h~~--T~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vR--G~Glm~gie~~~~ 368 (443)
T PRK07483 297 -FFQHGH--TYLGHATACAAALAVQRVIAEDG---LLANVRARGEQLRARLRERLGQHPHVGDIR--GRGLFVGVELVAD 368 (443)
T ss_pred -ccccCC--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCeeeEe--ecccEEEEEEeec
Confidence 001121 33466667788888888888765 4456777778888888763 333332111 1233444444211
Q ss_pred C------C-----HHHHHHHHHhhCCeEEccCCC---CCCCcEEEEeecCCCCHHHHH
Q 017726 317 I------N-----SSEIVRRAWQRYNLSLGLGLN---KVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 ~------~-----~~~l~~~L~~~~gv~v~~g~~---~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. + ...+.+.+.++ |+.+.+.-. ...++.+|+.+.-..++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid 425 (443)
T PRK07483 369 RATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425 (443)
T ss_pred ccccCCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEEEEECCCCCCHHHHH
Confidence 0 1 24577777654 999875311 112468999887766665544
No 364
>PRK06149 hypothetical protein; Provisional
Probab=99.58 E-value=2.1e-12 Score=130.93 Aligned_cols=308 Identities=15% Similarity=0.058 Sum_probs=183.7
Q ss_pred hHHHHHHHccCCCC--CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcch
Q 017726 21 PDQVIRAMNRNNED--YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFS 96 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~ 96 (367)
.+++.+++.++... +.+....+...++.+++++++...- +.+.|++||++|+..+++.. .....+|+....+|++
T Consensus 601 hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG 679 (972)
T PRK06149 601 HPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGL-DTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHG 679 (972)
T ss_pred CHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 45555555554321 1111123456688888888873222 35899999999999988731 2334578888888887
Q ss_pred HHHHHHHH--H----hCC------ceEEEeCCCCCC--C---C-----HHHHHHHHhc---cCCCCccEEEEEecCCCcc
Q 017726 97 LLWIDQQQ--R----LNF------NVDVVESDWGEG--A---K-----LDVLASKLAA---DTAHTIKAICIVHNETATG 151 (367)
Q Consensus 97 ~~~~~~~~--~----~g~------~~~~v~~~~~~~--~---d-----~e~l~~~i~~---~~~~~~~lv~~~~~~n~tG 151 (367)
.......- . .+. .+..++.+...+ + + .+++++.+++ .. .++.+|++.......|
T Consensus 680 ~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~iAavI~Epv~g~gG 758 (972)
T PRK06149 680 WTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASG-RGLAGFICEPVYGNAG 758 (972)
T ss_pred cChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcC-CceEEEEEcccccCCC
Confidence 43111100 0 000 122232221111 1 1 2444444432 22 4678888888888889
Q ss_pred cccc----HHHHHHHHHhcCCCcEEEEeeeec-cCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHH
Q 017726 152 VTNN----LSKVRKLLDEYRHPALFLVDGVSS-ICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA 221 (367)
Q Consensus 152 ~~~~----~~~i~~~~~~~~~~~~vi~D~~~~-~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~ 221 (367)
.+.+ +++++++|++ +|+++|+||++. +|..- +.......|++++ +|.+++...+|.+++++++.+.
T Consensus 759 ~i~~p~~yL~~l~~lc~~--~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~Pl~av~~~~~i~~~ 834 (972)
T PRK06149 759 GIALPPGYLQQVYAAVRA--RGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHPLGAVITRREIAEA 834 (972)
T ss_pred cccCCHHHHHHHHHHHHH--cCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEe--cccccCCeeeEEEEEcHHHHhh
Confidence 8887 8999999999 999999999984 43221 1112335788855 7888765557999999998876
Q ss_pred hccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccC
Q 017726 222 SKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQ 299 (367)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~ 299 (367)
+... ..+. + .+..+...+++..++|+.+++++ +.++..+..++|++.|+++ ...++..
T Consensus 835 ~~~~---~~~~-----------s---T~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~ 894 (972)
T PRK06149 835 LEAE---GYFF-----------S---STGGSPVSCRIGMAVLDVLREEK---LQENARRVGDHLKARLEALADRHPLIGA 894 (972)
T ss_pred hccC---Cccc-----------C---CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 6531 0011 1 22456666677777888887764 4556777888888888875 2343332
Q ss_pred CCccCCCceEEEEcCCC-----CC---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 300 KEEWFSDTVTAVIVPSH-----IN---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 300 ~~~~~~~~~~~~~~~~~-----~~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
-. -.+.++.+.+.++ .+ ...+++.|.++ ||.+.+. ...++.+||.+.-..+++++
T Consensus 895 vr--G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~--g~~~~vl~~~Ppl~it~~~i 957 (972)
T PRK06149 895 VH--GMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPT--GDHLNILKIKPPLCLDRESA 957 (972)
T ss_pred Ee--ecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeec--CCCCCEEEEECCCcCCHHHH
Confidence 11 1233444544111 11 34677888765 9998763 12246799987655555443
No 365
>PRK07481 hypothetical protein; Provisional
Probab=99.57 E-value=8.8e-12 Score=116.20 Aligned_cols=292 Identities=15% Similarity=0.106 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-------CC-CCeEEEEeCCcchHHHHHHHHHhC------
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-------SP-GDRIISFLIGQFSLLWIDQQQRLN------ 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-------~~-gd~vl~~~~~~~~~~~~~~~~~~g------ 107 (367)
+...++.++|.++++-...+.+.|++||++|++.++.... .+ ..+|+....+|++....... ..+
T Consensus 86 ~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s-~~~~~~~~~ 164 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGAS-VNGNTVFRR 164 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhc-cCCCccccc
Confidence 5556788888887742223469999999999999886421 12 35788888888885321111 001
Q ss_pred ------CceEEEeCCCC----CC-CCHHH--------HHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHH
Q 017726 108 ------FNVDVVESDWG----EG-AKLDV--------LASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLD 164 (367)
Q Consensus 108 ------~~~~~v~~~~~----~~-~d~e~--------l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~ 164 (367)
..+..++.+.. +. .|++. +++.+.....+++.+|++.......|.+.+ +++++++|+
T Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~ 244 (449)
T PRK07481 165 NYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCD 244 (449)
T ss_pred ccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHH
Confidence 11233332211 00 13333 344443211146789999988888888765 788999999
Q ss_pred hcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHH
Q 017726 165 EYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+ +|+++|.||++...... +.......|+++. .|.+++. ..+|.+++++++.+.+........
T Consensus 245 ~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~-------- 312 (449)
T PRK07481 245 R--HGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITSGYVPLGATMVNARIADAFEANADFGG-------- 312 (449)
T ss_pred H--cCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccCCCcCceEEEEcHHHHHHHhccCcccc--------
Confidence 9 99999999997643221 1222335788877 6888764 247999999998877653210000
Q ss_pred HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCC
Q 017726 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
.+..+. .+..+...+++..++++.+.+++ ..++..+..++|.+.|+++ .+.++..-. -.+.++.+.+.++
T Consensus 313 -~~~h~~--T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vr--G~Glm~gi~l~~~ 384 (449)
T PRK07481 313 -AIMHGY--TYSGHPVACAAALATLDIVVRED---LPANAAKRGAYLLEGLQPLKERFELVGDVR--GKGLMLALDLVAD 384 (449)
T ss_pred -ccccCC--CCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEe--ecceEEEEEeccc
Confidence 011121 33456666777777888887764 4456777788888888775 244333211 1233455554211
Q ss_pred ---C---C-----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 ---I---N-----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 ---~---~-----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. + ...+.+.+.+ .||.+.+. +..+|+++....+++|++
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~-----g~~i~l~Ppl~it~~eid 433 (449)
T PRK07481 385 KATREPIDPSKGYANAVADVARE-NGVLVRPS-----GTKIILSPPLVIQREDVD 433 (449)
T ss_pred ccccCCCCchhHHHHHHHHHHHh-CCeEEEec-----CCEEEEECCCCCCHHHHH
Confidence 0 1 2356666755 49988653 235899876655655443
No 366
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=1.6e-11 Score=114.57 Aligned_cols=305 Identities=14% Similarity=0.087 Sum_probs=181.1
Q ss_pred ChHHHHHHHccCCCC--CC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCc
Q 017726 20 IPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQ 94 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~ 94 (367)
-.+.+.+++.++... +. .....+...++.+++++++.... +.+.|++||++|+..++... .....+|+....+|
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~y 166 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGEL-NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSF 166 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 345566666664332 11 11224566788888888875322 36999999999999988642 23346788888888
Q ss_pred chHHHHHHHHHhCC------------ceEEEeCCCCCC-----C------CHHHHHHHHhccCCCCccEEEEEecCCCcc
Q 017726 95 FSLLWIDQQQRLNF------------NVDVVESDWGEG-----A------KLDVLASKLAADTAHTIKAICIVHNETATG 151 (367)
Q Consensus 95 ~~~~~~~~~~~~g~------------~~~~v~~~~~~~-----~------d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG 151 (367)
++...... ...|. .+..++...... . +++.+++.+++. .++.+|++....+..+
T Consensus 167 HG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~vAavIvEPv~g~g~ 243 (459)
T PRK06082 167 HGASLDAI-SVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE--GGIGAFIAEAVRNTDV 243 (459)
T ss_pred cCccHHHH-hhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC--CCEEEEEECCccCCCC
Confidence 87542111 11111 122333221110 1 135577777642 3567888887766533
Q ss_pred cccc---HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCC-cceeeeeCHHHHHHh
Q 017726 152 VTNN---LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPT-GMGIVCASPKALEAS 222 (367)
Q Consensus 152 ~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~~~~~~~~~ 222 (367)
.+.| +++++++|++ +|+++|+||+++..... ........|+++ .+|.++|.. .+|.+++++++....
T Consensus 244 ~~~~~~yl~~lr~lc~~--~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P~~av~~~~~i~~~~ 319 (459)
T PRK06082 244 QVPSKAYWKRVREICDK--HNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVPIAAMITKDKYNTAA 319 (459)
T ss_pred cCCCHHHHHHHHHHHHH--cCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--ecccccCCCCcceEEEEcHHHHhhc
Confidence 3445 7899999999 99999999998643221 122233578887 589997652 478888988865332
Q ss_pred ccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCC
Q 017726 223 KTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQK 300 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~ 300 (367)
... + .. +.+..+...+++..++++.+.+++ ..++..++.++|.+.|+++ .+.++..-
T Consensus 320 ~~~---------------~--~~-~T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 378 (459)
T PRK06082 320 QIS---------------L--GH-YTHEKSPLGCAAALATIEVIEQEG---LLEKVKADSQFMRERLLEMKAKYPLIGDV 378 (459)
T ss_pred cCC---------------C--CC-CCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence 210 0 00 133456666777777888887764 4567788888888888775 24333321
Q ss_pred CccCCCceEEEEcCCCC-----C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 301 EEWFSDTVTAVIVPSHI-----N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 301 ~~~~~~~~~~~~~~~~~-----~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
. -.+.++.+.+.+.. + ...+.+.+.+ .||.+.+. .++.+|+++....++++++
T Consensus 379 r--G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~----~~~~i~~~Ppl~it~~eid 439 (459)
T PRK06082 379 R--GIGLLWGVELVTDRHTKERAYDEAEAVLYRCLN-NGLSFKVS----QGNVIQLSPPLIITREELT 439 (459)
T ss_pred e--eccceeEEEEccCccccCccHHHHHHHHHHHHh-CCCEEEec----CCCEEEEeCCCccCHHHHH
Confidence 1 12334555552111 1 2356666654 59988652 2467999976666655443
No 367
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.56 E-value=3.1e-12 Score=115.54 Aligned_cols=283 Identities=13% Similarity=0.122 Sum_probs=172.4
Q ss_pred hHHHHHHHccCCCC--CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCC-CeEEEEeCCcc
Q 017726 21 PDQVIRAMNRNNED--YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPG-DRIISFLIGQF 95 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~g-d~vl~~~~~~~ 95 (367)
++++.+++.++... +.+ ....+...++.++++++.+.+ .+.+++||++|++.++... ...| ++|++...+|+
T Consensus 42 ~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~---~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syH 118 (364)
T PRK04013 42 HPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYE---YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFH 118 (364)
T ss_pred CHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCC---EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccc
Confidence 34556666654332 111 112355678888888887543 4899999999999988753 2234 78999888888
Q ss_pred hHHHHHHHH------HhCCc-----eEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-c---HHHHH
Q 017726 96 SLLWIDQQQ------RLNFN-----VDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-N---LSKVR 160 (367)
Q Consensus 96 ~~~~~~~~~------~~g~~-----~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~---~~~i~ 160 (367)
+........ ..+.. +..++. .|++.+++.+. +++++|++.+.....|... | +++++
T Consensus 119 G~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr 189 (364)
T PRK04013 119 GRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLR 189 (364)
T ss_pred cCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHH
Confidence 753211110 01111 222222 26788888886 4678999998887777665 4 88999
Q ss_pred HHHHhcCCCcEEEEeeeeccC---ce-eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 161 KLLDEYRHPALFLVDGVSSIC---AI-DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 161 ~~~~~~~~~~~vi~D~~~~~~---~~-~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++|++ +|+++|.|++++.. .+ .........|+++. .|.+++...+|.++.+.++ ....
T Consensus 190 ~lc~~--~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~~----~~~~---------- 251 (364)
T PRK04013 190 DLTED--VGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFDV----ERGK---------- 251 (364)
T ss_pred HHHHH--cCCEEEEechhhcCCCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEecccc----cCCC----------
Confidence 99999 99999999997632 11 11122234787777 7888765446777777664 1100
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCC
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSH 316 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 316 (367)
.+ ..+..+...+++..++++.++++++-+..++ . +. .+.. +.+..-. -.+.++.+.+.+
T Consensus 252 ------~~--~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~---~---l~-~l~~---~~v~~vR--G~Gl~~gve~~~- 310 (364)
T PRK04013 252 ------HG--STFGGNPLACKAVAVTLRILRRERLVEKAGE---K---FI-EIKG---ERVVTTR--GRGLMIGIVLKK- 310 (364)
T ss_pred ------cC--CCCCcCHHHHHHHHHHHHHHHhccHHHHHHH---H---HH-Hhcc---Ccceeee--eCcEEEEEEeCC-
Confidence 01 1345677777888888999988874332222 1 21 2211 1212111 133455666621
Q ss_pred CCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 317 INSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 317 ~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+...+.+.+.+ +|+.+.+. ..+.+|+.+.-..+++++.
T Consensus 311 -~~~~i~~~~~~-~Gll~~~~----g~~vlr~~Ppl~it~~~i~ 348 (364)
T PRK04013 311 -PVGKYVEELQN-RGYLVHTA----GQRVIRLLPPLIISKDTME 348 (364)
T ss_pred -cHHHHHHHHHh-CCcEEeeC----CCCEEEEeCCcccCHHHHH
Confidence 35678888865 49988642 2367999987777765543
No 368
>PRK07480 putative aminotransferase; Validated
Probab=99.56 E-value=5.6e-12 Score=117.52 Aligned_cols=310 Identities=14% Similarity=0.089 Sum_probs=178.8
Q ss_pred hHHHHHHHccCCCC--C--CC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC------C-C-CCeE
Q 017726 21 PDQVIRAMNRNNED--Y--RS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL------S-P-GDRI 87 (367)
Q Consensus 21 ~~~v~~a~~~~~~~--~--~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~------~-~-gd~v 87 (367)
.+++.+++.++... + .. ....+...++.++|.+.+... .+.+.|++||++|++.++.... . + ..+|
T Consensus 68 ~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~i 146 (456)
T PRK07480 68 RKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPG-FNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVI 146 (456)
T ss_pred CHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEE
Confidence 45566666554332 1 11 112355667888888877432 2369999999999999886421 1 2 3467
Q ss_pred EEEeCCcchHHHHHHH--------HHhC---CceEEEeCCCCC----CCC--------HHHHHHHHhccCCCCccEEEEE
Q 017726 88 ISFLIGQFSLLWIDQQ--------QRLN---FNVDVVESDWGE----GAK--------LDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 88 l~~~~~~~~~~~~~~~--------~~~g---~~~~~v~~~~~~----~~d--------~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
+....+|++....... +..+ ..+..++.+... ..+ ++.+++.+.+...+++.+|++.
T Consensus 147 i~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~E 226 (456)
T PRK07480 147 ISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGE 226 (456)
T ss_pred EEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 8777778775321111 0001 011222221100 001 2566655543322467889999
Q ss_pred ecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eeccccccceEEEecCCCcccCCC-cceeeee
Q 017726 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPT-GMGIVCA 214 (367)
Q Consensus 145 ~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~-g~g~~~~ 214 (367)
......|.+.+ +++++++|++ +|+++|+||++..... .+.......|++++ +|.++|.. .+|.+++
T Consensus 227 Piqg~gG~~~~~~~yl~~lr~lc~~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~gG~~Pi~av~~ 302 (456)
T PRK07480 227 PIQGAGGVIIPPATYWPEIQRICRK--YDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTI--AKGLTSGYIPMGAVGV 302 (456)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHH--cCCEEEEechhhCCCcCcchhhhhhcCCCCCeeee--ehhhccCCccceEEEE
Confidence 88887888776 8889999999 9999999999853221 11222334687766 78887642 3788889
Q ss_pred CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHH-HHHHHHHHHHHHHc-
Q 017726 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERH-RRLGKATRLAVEAW- 292 (367)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~-~~~~~~l~~~L~~~- 292 (367)
++++.+.+.... .. +..+. .++.+...+++..++|+.+.++++ .++. .+..++|.+.|+++
T Consensus 303 ~~~i~~~~~~~~-~~-----------~~~~~--T~~gnpl~~Aaa~a~L~~l~~~~l---~~~~~~~~g~~l~~~l~~l~ 365 (456)
T PRK07480 303 GDRVAEVLIEEG-GE-----------FNHGF--TYSGHPVAAAVALANLRILRDEGI---VERVRDDTGPYLQKRLRELA 365 (456)
T ss_pred cHHHHHHHhcCC-CC-----------cccCC--CCCcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHhh
Confidence 999877663100 00 01122 345677778888889998887753 3355 35667777777664
Q ss_pred CCccccCCCccCCCceEEEEcCCC-C------C----HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSH-I------N----SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~-~------~----~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
...++..-. -.+.++.+.+-+. . + ...+.+.+.+ .||.+.+. ++.+|+.+....+++|++
T Consensus 366 ~~~~i~~vr--G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~-----~~~l~~~Ppl~it~~eid 436 (456)
T PRK07480 366 DHPLVGEVR--GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA-NGLIMRAV-----GDRMIISPPLVITHAEID 436 (456)
T ss_pred cCCCeeeEE--eecceEEEEEeccccccccCcchhhHHHHHHHHHHH-CCcEEeec-----CCEEEEECCCCCCHHHHH
Confidence 332222111 1233444444111 0 1 1345566655 49988641 357999877766655443
No 369
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.56 E-value=4.4e-12 Score=117.76 Aligned_cols=291 Identities=14% Similarity=0.150 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC----------C----CCCeEEEEeCCcchHHHHHHHHHhC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----------S----PGDRIISFLIGQFSLLWIDQQQRLN 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~----------~----~gd~vl~~~~~~~~~~~~~~~~~~g 107 (367)
....++-++++++..-+..+.+.|++||++|++.++.... . .+.+|+....+|++......+. .|
T Consensus 85 ~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~-~~ 163 (431)
T TIGR03251 85 VAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSL-TN 163 (431)
T ss_pred HHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhc-cC
Confidence 3445566666666422223468999999999999886421 0 1367998888888864211111 11
Q ss_pred Cc-eE----------EEeCC-------CCC-C-------CCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 108 FN-VD----------VVESD-------WGE-G-------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 108 ~~-~~----------~v~~~-------~~~-~-------~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
.. .. .++.+ ... . -+++++++.+.... +++.+|++.......|.+.+ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~iAavivEPv~g~~G~~~~~~~~l~ 242 (431)
T TIGR03251 164 TDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERP-HDIACFIAEPIQGEGGDNHFRPEFLR 242 (431)
T ss_pred CccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCC-CcEEEEEEeccccCCCCcCCCHHHHH
Confidence 10 00 01110 000 0 12455666676444 57889999988888898763 78
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccC-CCCcee
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTA-KSVRVF 231 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~-~~~~~~ 231 (367)
+|+++|++ +|+++|+|++++..... ++.....+|+++. +|.+ + ..|++.. +++.+..... ....
T Consensus 243 ~l~~lc~~--~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~--gK~~--~-~~g~~~~-~~i~~~~~~~~~~~~-- 312 (431)
T TIGR03251 243 AMRALCDE--HDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAF--GKKT--Q-VCGIMAG-RRVDEVADNVFAVPS-- 312 (431)
T ss_pred HHHHHHHH--cCCEEEEecchhccCccchHHHHHhcCCCCCEEEe--cccC--c-cceEEec-chHHHhhhhcccCcc--
Confidence 89999999 99999999998732221 1222345788876 4544 2 2355544 3321111100 0000
Q ss_pred echHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCCce
Q 017726 232 FDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTV 308 (367)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~ 308 (367)
..++ .++.+...+++..++++.+.++++ .++.+++.+++.+.|+++ ... +...-. ..+.+
T Consensus 313 ----------~~~~--T~~gnpl~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~~i~~vr--g~G~~ 375 (431)
T TIGR03251 313 ----------RLNS--TWGGNLVDMVRATRILEIIEEERL---VDNARVQGAHLLARLHELAAEFPHLVSNPR--GRGLM 375 (431)
T ss_pred ----------ccCC--CCCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCccceeccc--cccee
Confidence 0111 234666777888888998877763 334555566666666553 222 222211 12446
Q ss_pred EEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH--HHhhhhc
Q 017726 309 TAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF--NFQLLFQ 366 (367)
Q Consensus 309 ~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~--~~~~l~~ 366 (367)
+.+.+++......+.+.|.+ .||.+.+.- ...+|+++....+++|+ ..++|++
T Consensus 376 ~~i~~~~~~~~~~~~~~l~~-~Gvl~~~~g----~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 376 CAFDLPSTADRDEVIRQLYR-EGVLLLGCG----ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEEEeCCHHHHHHHHHHHHh-CCeEEecCC----CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 66776432224568888875 499986531 25689887776665544 4555543
No 370
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.55 E-value=2e-12 Score=115.86 Aligned_cols=283 Identities=13% Similarity=0.082 Sum_probs=176.8
Q ss_pred ChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC-CCCeEEEEeC------
Q 017726 20 IPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS-PGDRIISFLI------ 92 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~-~gd~vl~~~~------ 92 (367)
++++++++|.. .+. .|.-...+.++++.+++++|.+. +++|.+|+.+-++++..++. +|+.+++..+
T Consensus 55 pS~~m~aAM~~-GDD--~Y~gdpSv~~Lee~vael~G~E~---alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~h 128 (467)
T TIGR02617 55 VTQSMQAAMMR-GDE--AYSGSRSYYALAESVKNIFGYQY---TIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS 128 (467)
T ss_pred CCHHHHHHHHc-CCc--ccccCchHHHHHHHHHHHhCCce---EEECCCCchHHHHHHHhhcccccccccccccccccce
Confidence 67888888886 222 23333556799999999999876 68888999999999988887 6666653222
Q ss_pred -CcchHHHHHHHHHhCCceEEEeC----------CCCCCCCHHHHHHHHhccCCCCccEEEEEecCCC-cccccc---HH
Q 017726 93 -GQFSLLWIDQQQRLNFNVDVVES----------DWGEGAKLDVLASKLAADTAHTIKAICIVHNETA-TGVTNN---LS 157 (367)
Q Consensus 93 -~~~~~~~~~~~~~~g~~~~~v~~----------~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~-tG~~~~---~~ 157 (367)
-||.. ....+...|+.++.++. +..+.+|+++++++|.+...++...+...-.+|. -|.+.| +.
T Consensus 129 n~~fet-t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr 207 (467)
T TIGR02617 129 NYFFDT-TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLK 207 (467)
T ss_pred EEEEec-chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHH
Confidence 12221 12346678888777632 2357899999999998643123333333323343 456665 66
Q ss_pred HHHHHHHhcCCCcEEEEeeee----cc-------Cceeecccc------ccceEEEecCCCcccCCCcceeeeeCHH---
Q 017726 158 KVRKLLDEYRHPALFLVDGVS----SI-------CAIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASPK--- 217 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~----~~-------~~~~~~~~~------~~~d~~~~s~~K~~~g~~g~g~~~~~~~--- 217 (367)
++.++|++ +|+.++.|++= +. +....+..+ ..+|.++.|++|.++.|-| |+++++++
T Consensus 208 ~V~~la~~--~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~ 284 (467)
T TIGR02617 208 AVYEIAKK--YDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFF 284 (467)
T ss_pred HHHHHHHH--cCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHH
Confidence 78899999 99999999752 11 122222211 2589999999999977777 88888776
Q ss_pred -HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCcc
Q 017726 218 -ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKN 296 (367)
Q Consensus 218 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~ 296 (367)
+.++.+...... | |.-+.+..+.-.+-++...|....++ ...++...-.++|.+.|++.|+++
T Consensus 285 ~l~~~~~~~~i~~------------E-Gf~tYGGlagrd~ea~a~Gl~e~~~~---~yl~~ri~qv~yl~~~L~~~Gvpi 348 (467)
T TIGR02617 285 DVYTECRTLCVVQ------------E-GFPTYGGLEGGAMERLAVGLYDGMNL---DWLAYRINQVQYLVNGLEEIGVVC 348 (467)
T ss_pred HHHHHHHhhcccc------------c-CCcCcCchhHHHHHHHHhhhhhcccH---HHHHHHHHHHHHHHHHHHhCCCcE
Confidence 233333221111 0 11123335555555666555554332 234444556679999999999988
Q ss_pred ccCCCccCCCceEEEEc----C----CCCCHHHHHHHHHhhCCeE
Q 017726 297 CTQKEEWFSDTVTAVIV----P----SHINSSEIVRRAWQRYNLS 333 (367)
Q Consensus 297 ~~~~~~~~~~~~~~~~~----~----~~~~~~~l~~~L~~~~gv~ 333 (367)
+.. ++.-++++. | ...++..|+-+|..+.||-
T Consensus 349 ~~~-----Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR 388 (467)
T TIGR02617 349 QQA-----GGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIR 388 (467)
T ss_pred Eec-----CccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcc
Confidence 763 333344432 1 1235566887787776764
No 371
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=2.9e-11 Score=112.96 Aligned_cols=307 Identities=18% Similarity=0.144 Sum_probs=179.4
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCC--CCceEEec-CChhHHHHHHHHcc--CCCCCeEEEEe
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTT--SGTPFLIP-TTGTGAWESALTNT--LSPGDRIISFL 91 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~--~~~~v~~~-~ggt~al~~~~~~~--~~~gd~vl~~~ 91 (367)
++.+.+++.++... +......+...++-+++.+.+... ..+.+.|+ +||++|+..++... .....+|+...
T Consensus 81 ~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~ 160 (464)
T PRK06938 81 HPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQ 160 (464)
T ss_pred CHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEEC
Confidence 55677777665421 111112344445666666655321 11246565 79999999988642 22346788888
Q ss_pred CCcchHHHHHHHHHhC------------CceEEEeCCCCCC------------CCHHHHHHHHhccC--CCCccEEEEEe
Q 017726 92 IGQFSLLWIDQQQRLN------------FNVDVVESDWGEG------------AKLDVLASKLAADT--AHTIKAICIVH 145 (367)
Q Consensus 92 ~~~~~~~~~~~~~~~g------------~~~~~v~~~~~~~------------~d~e~l~~~i~~~~--~~~~~lv~~~~ 145 (367)
.+|++......+. .+ ..+..++.+...+ .+.+.+++.+.+.. .+++.+|++..
T Consensus 161 ~~yHG~t~~als~-t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EP 239 (464)
T PRK06938 161 GGYHGMSQGALSL-MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEV 239 (464)
T ss_pred CccCCccHHHHhh-cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEcc
Confidence 8888854211111 11 1233444432111 12567788876421 02578888888
Q ss_pred cCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCH
Q 017726 146 NETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASP 216 (367)
Q Consensus 146 ~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~ 216 (367)
.....|.+.| +++++++|++ +|+++|.||.+...... ........|+++. .|.++|...+|.+++++
T Consensus 240 iqg~gG~~~p~~~yl~~lr~lc~~--~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gKglggG~PlsAv~~~~ 315 (464)
T PRK06938 240 VQGEGGVIPAPIEWLRGLRRITEE--AGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVL--SKAIGGSLPLAVVVYRE 315 (464)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHH--cCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEe--eccccCCCceEEEeehh
Confidence 7777787765 7889999999 99999999997643221 1222335788887 68887655578888887
Q ss_pred HHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CC
Q 017726 217 KALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GL 294 (367)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~ 294 (367)
++ +.+.... ..+ .+..+...+++..++++.+.+++ ..++..++.++|.+.|+++ .+
T Consensus 316 ~~-~~~~~~~---------------~~~---T~~gnpla~Aaa~a~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~ 373 (464)
T PRK06938 316 WL-DTWQPGA---------------HAG---TFRGNQMAMAAGSATLRYIKEHR---LAEHAAAMGERLREHLRQLQRDY 373 (464)
T ss_pred Hh-hccCCCC---------------CCC---CCCcCHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhC
Confidence 74 4332110 112 33466667777888888887764 4556777788888888775 24
Q ss_pred ccccCCCccCCCceEEEEcCCC--C---------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 295 KNCTQKEEWFSDTVTAVIVPSH--I---------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~--~---------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+++..-. -.+.++.+.+.+. . + ...+.+.+.+ +|+.+.++- ..++.+|+.+....+++|+
T Consensus 374 ~~i~~Vr--G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gll~~~~g--~~~~~l~~~Ppl~it~~ei 447 (464)
T PRK06938 374 PQLGDVR--GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLR-RGLILELGG--RHGSVVRFLPPLIITAEQI 447 (464)
T ss_pred CCeeeee--ccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHH-CCeEEeecC--CCCCEEEEECCCccCHHHH
Confidence 4333211 1233455554211 0 1 2346666765 599887531 1246899986666665544
No 372
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=4.3e-12 Score=109.45 Aligned_cols=318 Identities=13% Similarity=0.083 Sum_probs=185.5
Q ss_pred ChHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHh----cCC-CCceEEecCChhHHHHHHHHccC-CCCCeEEE
Q 017726 20 IPDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIF----KTT-SGTPFLIPTTGTGAWESALTNTL-SPGDRIIS 89 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~ggt~al~~~~~~~~-~~gd~vl~ 89 (367)
.|..+++........ -..|...+..+-+|+.+|+++ |.+ ++++|.+|+|++.|+..++..++ .+.+-|++
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gvli 166 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLI 166 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEe
Confidence 445555554443322 223444455666677776665 432 44679999999999998887653 57788999
Q ss_pred EeCCcchHHHHHHHHHhCCceE--EEeCCCCCCCCHHHHHHHHhccC-CCCccEEEEEecCCCcccccc---HHHHHHHH
Q 017726 90 FLIGQFSLLWIDQQQRLNFNVD--VVESDWGEGAKLDVLASKLAADT-AHTIKAICIVHNETATGVTNN---LSKVRKLL 163 (367)
Q Consensus 90 ~~~~~~~~~~~~~~~~~g~~~~--~v~~~~~~~~d~e~l~~~i~~~~-~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~ 163 (367)
+.|-|+-+. ..++. .|...+ .++-+..|.+|.++|++.+++.. .-+++++++.+|.||||.+.. +++|..+|
T Consensus 167 PiPQYPLYs-Ati~l-~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa 244 (475)
T KOG0258|consen 167 PIPQYPLYS-ATISL-LGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFA 244 (475)
T ss_pred ecCCCchhH-HHHHH-hCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHH
Confidence 999776543 34444 444433 34444578999999999888731 146899999999999999874 78888899
Q ss_pred HhcCCCcEEEEeeeeccCc-----eee-------ccccccc----eEEEecCCCcccCCCc--ceeee---eCHHHHHHh
Q 017726 164 DEYRHPALFLVDGVSSICA-----IDF-------RMDEWGI----DVALTGSQKALSLPTG--MGIVC---ASPKALEAS 222 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~-----~~~-------~~~~~~~----d~~~~s~~K~~~g~~g--~g~~~---~~~~~~~~~ 222 (367)
++ .+++++.|+.|.--. ... .+..... -+...|.||.+.|-.| .|++= ..++..+++
T Consensus 245 ~~--~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi 322 (475)
T KOG0258|consen 245 AE--EGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI 322 (475)
T ss_pred HH--cCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence 98 999999999753211 110 1111111 2444578888766433 36653 345554443
Q ss_pred ccCCCCceeechHHHH-HHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCC
Q 017726 223 KTAKSVRVFFDWKDYI-KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQK 300 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 300 (367)
.+...-........+. ....-..-.++.++. +....+ -+.+.......+..+.+.++++ |+.+..+.
T Consensus 323 ~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy----------~~~~~E-kd~il~~l~~ra~l~~~~~ns~~gi~cn~~q 391 (475)
T KOG0258|consen 323 KKLASIKLCPQVSGQKLVDLVVNPPKPGDPSY----------DLFSSE-KDGILSSLRSRAKLTEDAFNSLEGISCNPVQ 391 (475)
T ss_pred HHHHhhhhcCCccchhhhceecCCCCCCCcch----------hhhhhh-hHhHHHHHHHHhHHHHHHHhhcCceeeccCc
Confidence 3221111000000000 000001101222222 222222 2456667788888999999998 99998874
Q ss_pred CccCCCceEEEEcCC---------CCCH-HHHHHHHHhhCCeEEccCCCC--CCCcE-EEEeecCCC
Q 017726 301 EEWFSDTVTAVIVPS---------HINS-SEIVRRAWQRYNLSLGLGLNK--VAGKV-FRIGHLGHL 354 (367)
Q Consensus 301 ~~~~~~~~~~~~~~~---------~~~~-~~l~~~L~~~~gv~v~~g~~~--~~~~~-iRi~~~~~~ 354 (367)
+....-. -+.+|. ++.+ .-.|..|++.-||.+.||.++ ..|.+ +|..+....
T Consensus 392 GAMY~fP--~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 392 GAMYLFP--QISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred cceeecc--cccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 3322221 122231 1222 235678888999999998654 34444 999876644
No 373
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.51 E-value=3.2e-11 Score=112.15 Aligned_cols=287 Identities=15% Similarity=0.163 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC----------C---C-CCeEEEEeCCcchHHHHHHHHHhC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL----------S---P-GDRIISFLIGQFSLLWIDQQQRLN 107 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~----------~---~-gd~vl~~~~~~~~~~~~~~~~~~g 107 (367)
+...++.+.++++.+-+..+.+.|++||++|++.++.... . + ..+|+....+|++......+. .+
T Consensus 92 ~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~-~~ 170 (443)
T PRK08297 92 VEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL-TN 170 (443)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh-cC
Confidence 4455676777766532222469999999999999886431 1 1 257888888888864211111 11
Q ss_pred C--------ce---EEEeCCC------CCC---------CCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 108 F--------NV---DVVESDW------GEG---------AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 108 ~--------~~---~~v~~~~------~~~---------~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
. .. ..++.+. +.. -+++++++.+.+++ +++.+|++.......|.+.+ ++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~iAavI~EPi~g~~G~~~pp~~yl~ 249 (443)
T PRK08297 171 TDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHP-HDIACFIAEPIQGEGGDNHFRPEFFA 249 (443)
T ss_pred CcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCC-CcEEEEEEccccCCCCCcCCCHHHHH
Confidence 0 00 0011110 000 02456667776554 57889999988888887753 78
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
+++++|++ +|+++|.||++...... ........|++++ +|.+. +|.++..+++.+.........
T Consensus 250 ~lr~lc~~--~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~----~~a~l~~~~i~~~~~~~~~~~--- 318 (443)
T PRK08297 250 AMRELCDE--HDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAF--GKKTQ----VCGIMAGRRVDEVEDNVFAVS--- 318 (443)
T ss_pred HHHHHHHH--cCCEEEEechhhccCccchHHHHHhcCCCCCEEEe--ccccc----ccceecchHHHHhhhhhccCc---
Confidence 89999999 99999999998633221 1112235788876 67762 333344444322111000000
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEE
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTA 310 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~ 310 (367)
....+ .+..+...+++..++++.+.+.+ +.++.+++.+++.+.|+++ .++....+-. ..+.++.
T Consensus 319 -------~~~~~---T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr-g~G~~~~ 384 (443)
T PRK08297 319 -------SRINS---TWGGNLVDMVRARRILEVIEEDG---LVENAARQGEYLLARLEELAAEFPAVVSNVR-GRGLMCA 384 (443)
T ss_pred -------cccCC---CCCccHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHCCCcceeee-ccceEEE
Confidence 00112 33456666777777888877654 4556777788888888775 2332210000 1345667
Q ss_pred EEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 311 VIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 311 ~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+.+++......+++.|.+ +||.+.+.- ...+|+.+....+++++.
T Consensus 385 i~~~~~~~~~~~~~~l~~-~Gvl~~~~~----~~~lr~~P~l~~t~~eid 429 (443)
T PRK08297 385 FDLPTTADRDEVIRRLWE-EGVLVLPCG----ERSIRFRPALTVTTEEID 429 (443)
T ss_pred EEecCHHHHHHHHHHHHH-CCEEEecCC----CCeEEEECCccCCHHHHH
Confidence 777432234578888875 599987531 246899766555554443
No 374
>PRK06148 hypothetical protein; Provisional
Probab=99.51 E-value=2.8e-11 Score=122.97 Aligned_cols=288 Identities=12% Similarity=0.046 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHH-------HHhC----C
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQ-------QRLN----F 108 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~-------~~~g----~ 108 (367)
+...++.+++.+.+... .+.+.|++||++|+..+++.. .....+|++...+|++....... ...+ .
T Consensus 663 ~~~~~lAe~L~~~~p~~-~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~ 741 (1013)
T PRK06148 663 DAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPD 741 (1013)
T ss_pred HHHHHHHHHHHHhCCCC-cCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCC
Confidence 44567777777776422 245899999999999988642 23345788888888875311111 0001 1
Q ss_pred ceEEEeCCCC--CCC---C-------HHHHHHHHhc---cCCCCccEEEEEecCCCcccccc----HHHHHHHHHhcCCC
Q 017726 109 NVDVVESDWG--EGA---K-------LDVLASKLAA---DTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHP 169 (367)
Q Consensus 109 ~~~~v~~~~~--~~~---d-------~e~l~~~i~~---~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~ 169 (367)
.+..++.+.. ..+ + .+.+++.++. .. ..+.+|++.......|.+.+ +++++++|++ +|
T Consensus 742 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~-~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~--~g 818 (1013)
T PRK06148 742 HVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKG-RGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRA--AG 818 (1013)
T ss_pred CceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccC-CceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHH--hC
Confidence 1222221110 001 1 1345555542 22 45788888888877888776 8899999999 99
Q ss_pred cEEEEeeeeccCc-e-----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhc
Q 017726 170 ALFLVDGVSSICA-I-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243 (367)
Q Consensus 170 ~~vi~D~~~~~~~-~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
+++|.||++.... . .+.......|+++. .|.+++...+|.+++++++.+.+.... .+.
T Consensus 819 ~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~--gK~lggG~Plgav~~~~ei~~~~~~g~---~~~----------- 882 (1013)
T PRK06148 819 GVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTM--GKPIGNGHPMGAVVTTREIADSFDNGM---EYF----------- 882 (1013)
T ss_pred CEEEEEecccCCCCCCCcchhhhhcCCCcceeee--cccccCCcceEEEEEcHHHHhhccCCC---ccc-----------
Confidence 9999999985322 1 11222335788776 799977666899999999887664310 000
Q ss_pred CCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCC----
Q 017726 244 GTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHI---- 317 (367)
Q Consensus 244 ~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---- 317 (367)
+ .+..+...+++..++++.+.+++ +.++..+..++|++.|+++ .+.++..-. -.+.++.+.+..+.
T Consensus 883 ~---Tf~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~Vr--G~Gl~~gvel~~~~~~~~ 954 (1013)
T PRK06148 883 N---TFGGNPVSCAIGLAVLDIIEDED---LQRNALEIGNYLLAGLRELQDRFDIIGDVR--GMGLFLGIELVTDRKTKA 954 (1013)
T ss_pred c---CCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEe--eeceEEEEEecCCccccC
Confidence 2 33466666777788888887765 4456777888888888775 343332111 12334555542110
Q ss_pred -C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 318 -N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 318 -~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+ ...+++.+.+ +||.+.+. . ..++.+||.+....++++++
T Consensus 955 ~~~~~~~~i~~~~~~-~Gvl~~~~-g-~~~~vlr~~Ppl~it~~~id 998 (1013)
T PRK06148 955 PATAIARYVKNGARE-RGILIGTE-G-PHDNVLKIRPPLIFSRADAD 998 (1013)
T ss_pred ccHHHHHHHHHHHHh-CCeEEecc-C-CCCCEEEEeCCccCCHHHHH
Confidence 1 2357777765 49998653 1 12577999876666665443
No 375
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.50 E-value=1.8e-11 Score=113.42 Aligned_cols=270 Identities=14% Similarity=0.126 Sum_probs=159.8
Q ss_pred ceEEecCChhHHHHHHHHccC---C-----------------------C---CCeEEEEeCCcchHHHHHHHHHh-----
Q 017726 61 TPFLIPTTGTGAWESALTNTL---S-----------------------P---GDRIISFLIGQFSLLWIDQQQRL----- 106 (367)
Q Consensus 61 ~~v~~~~ggt~al~~~~~~~~---~-----------------------~---gd~vl~~~~~~~~~~~~~~~~~~----- 106 (367)
+.+.|++||++|++.++.... . + ..+||....+|++..........
T Consensus 123 ~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~ 202 (464)
T TIGR00699 123 DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH 202 (464)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 469999999999999886421 0 1 12688888888886422111100
Q ss_pred --C---CceEEEeCCCC---C-----------CCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHH
Q 017726 107 --N---FNVDVVESDWG---E-----------GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLL 163 (367)
Q Consensus 107 --g---~~~~~v~~~~~---~-----------~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~ 163 (367)
+ .....+|.+.. + .-+++.++++++++. .++.+|++.......|.+.| +++++++|
T Consensus 203 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~-~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc 281 (464)
T TIGR00699 203 KLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWH-KPVAAIIVEPIQSEGGDNHASPDFFRKLRDIT 281 (464)
T ss_pred ccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcC-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence 1 11122222210 0 013566778886543 46889999988888898887 88999999
Q ss_pred HhcCCCcEEEEeeeeccCcee-----eccccc--cceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHH
Q 017726 164 DEYRHPALFLVDGVSSICAID-----FRMDEW--GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKD 236 (367)
Q Consensus 164 ~~~~~~~~vi~D~~~~~~~~~-----~~~~~~--~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (367)
++ +|+++|+||++...... ...... ..|++++ +|.+++ .|+++.+ +. +... ..
T Consensus 282 ~~--~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~~~-~~---~~~~-~~-------- 341 (464)
T TIGR00699 282 KK--HNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFFHD-PA---FRPN-KP-------- 341 (464)
T ss_pred HH--cCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc---CCccccc-hh---ccCC-CC--------
Confidence 99 99999999998633221 111112 2788666 788731 1443333 21 1110 00
Q ss_pred HHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCc-cccCCCccCCCceEEEEc
Q 017726 237 YIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLK-NCTQKEEWFSDTVTAVIV 313 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~ 313 (367)
+..++ .+..+...+++..++++.+.+++ ..++..+..++|++.|+++ .++ ++..-...-.+.++.+.+
T Consensus 342 ----~~~~~--T~~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~ 412 (464)
T TIGR00699 342 ----YRQFN--TWMGDPSRALILREIIQEIKRKD---LLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDT 412 (464)
T ss_pred ----ccccc--CCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEec
Confidence 00111 33466667777888888887765 3446667777888888775 243 222100001345666776
Q ss_pred CCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH--Hhhhh
Q 017726 314 PSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN--FQLLF 365 (367)
Q Consensus 314 ~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~--~~~l~ 365 (367)
++......+.+.+.++ |+.+... ..+.+|+.+....+++|+. ..+|+
T Consensus 413 ~~~~~~~~i~~~~~~~-Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~ 461 (464)
T TIGR00699 413 PDEAKRDKLLKKARNN-GVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIIS 461 (464)
T ss_pred CCHHHHHHHHHHHHHC-CcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHH
Confidence 4322245678888765 9998642 2367999987777766554 44443
No 376
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.47 E-value=8.8e-11 Score=114.84 Aligned_cols=316 Identities=16% Similarity=0.095 Sum_probs=192.5
Q ss_pred ccccCCCC--CChHHHHHHHccCCC---C--CCC----CcHHHHHHHHHHHHHHHhcCCCCceEEecCChh---HHHHHH
Q 017726 11 HLFVPGPV--HIPDQVIRAMNRNNE---D--YRS----PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGT---GAWESA 76 (367)
Q Consensus 11 ~~~~~~p~--~~~~~v~~a~~~~~~---~--~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt---~al~~~ 76 (367)
.+.+.|-. -+|..+.+.+.+... . .+. .+..+..-++..+++++.|.+-...=++ .++| +|+.++
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~-D~atA~aEA~~ma 160 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLL-DEATAAAEAMALA 160 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhc-cchhHHHHHHHHH
Confidence 34444443 446666466555321 1 122 2334556788999999999983221133 4444 555554
Q ss_pred HHccCCCCCeEEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc
Q 017726 77 LTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 77 ~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
....-.+..+++++..-|+..+ ....++..|++++. ++++++++ ..+..+++.+| |..|.+.
T Consensus 161 ~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~----~~~~~v~vq~P-~~~G~i~ 224 (954)
T PRK12566 161 KRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA----HAVFGALLQYP-DTHGEIR 224 (954)
T ss_pred HHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC----CCEEEEEEECC-CCceEEc
Confidence 4332223567888877776654 34566777887774 33344444 24567777776 5899999
Q ss_pred cHHHHHHHHHhcCCCcEEEEeeee-ccCceeeccccccceEEEecCCCccc-----CCCcceeeeeCHHHHHHhccCCCC
Q 017726 155 NLSKVRKLLDEYRHPALFLVDGVS-SICAIDFRMDEWGIDVALTGSQKALS-----LPTGMGIVCASPKALEASKTAKSV 228 (367)
Q Consensus 155 ~~~~i~~~~~~~~~~~~vi~D~~~-~~~~~~~~~~~~~~d~~~~s~~K~~~-----g~~g~g~~~~~~~~~~~~~~~~~~ 228 (367)
|+++|.+++|+ .|+++++-.-- +++.+ -+..++|+||++++.+. |+ |.+..|++.+++++.+++.....+
T Consensus 225 d~~~i~~~~h~--~gal~~~~~d~laL~ll-~~Pge~GADI~vG~~Q~-fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG 300 (954)
T PRK12566 225 DLRPLIDQLHG--QQALACVAADLLSLLVL-TPPGELGADVVLGSTQR-FGVPMGYGGPHAAYFACRDDYKRAMPGRIIG 300 (954)
T ss_pred cHHHHHHHHHH--cCCEEEEEeCHHHHhCC-CChhhcCCcEEeeCCCc-CCCCCCCCCCCeeeeeehHHHHhhCCCCccc
Confidence 99999999999 89986633221 22222 23456799999887653 32 234469999999998888765542
Q ss_pred ---------ceeechHH--HHHHhhcCCccCCCCcHHHHHHHHHHHH--HHHHhChHHHHHHHHHHHHHHHHHHHHcCCc
Q 017726 229 ---------RVFFDWKD--YIKFYNLGTFWPYTPSIQLLYGLRAALD--LIFEEGLENVIERHRRLGKATRLAVEAWGLK 295 (367)
Q Consensus 229 ---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~al~~al~--~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~ 295 (367)
.+.+.++. +-.|-+..+ .+.-....+.|+.+++. ++..+|++++.+++..++.++.+.|++.|++
T Consensus 301 ~s~D~~G~~a~~l~LqtREQHIRReKAt--SNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~ 378 (954)
T PRK12566 301 VSRDARGNTALRMALQTREQHIRREKAN--SNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIK 378 (954)
T ss_pred eeecCCCCeeeehhhhHHHHHhhhcccc--chhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 11122333 233444444 33333344455555544 3456789999999999999999999999988
Q ss_pred cccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 296 NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+... .++.. +.+++ . .+..++.++..++ ||-++-- .+..+.||+.-+.+..|+.
T Consensus 379 ~~~~--~fF~~--~~v~~-~-~~~~~~~~~a~~~-~~n~r~~----~~~~~~~s~de~~~~~~~~ 432 (954)
T PRK12566 379 RLNR--HFFDT--LTLEV-G-GAQAAIIESAEAA-RINLRIL----GRGRLGVSLDETCDEATVA 432 (954)
T ss_pred cccC--Cccce--EEEEc-c-CCHHHHHHHHHHC-CCeeEEe----CCCeEEEEeCCCCCHHHHH
Confidence 7653 22332 33444 2 1466777777554 8777642 2346888876666665543
No 377
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.47 E-value=2.7e-10 Score=106.42 Aligned_cols=309 Identities=14% Similarity=0.129 Sum_probs=176.6
Q ss_pred hHHHHHHHccCCCC----CCCCcHHHHHHHHHHHHHHHhcCCC-C-ceEEecCChhHHHHHHHHcc--CCCCCeEEEEeC
Q 017726 21 PDQVIRAMNRNNED----YRSPAVPALTKTLLEDIKKIFKTTS-G-TPFLIPTTGTGAWESALTNT--LSPGDRIISFLI 92 (367)
Q Consensus 21 ~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~~~~~-~-~~v~~~~ggt~al~~~~~~~--~~~gd~vl~~~~ 92 (367)
.+++.+++.++... +......+...++.+++.+.+.... . ..+.+++||++|++.++... ....++|+....
T Consensus 76 ~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~ 155 (459)
T PRK06931 76 HPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSG 155 (459)
T ss_pred CHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 45666666665431 1111223555677777777764321 1 22455689999999988642 234557888888
Q ss_pred CcchHHHHHHHHH--h---------CCceEEEeCCCCCCC--------CHHHH----HHHHhcc--CCCCccEEEEEecC
Q 017726 93 GQFSLLWIDQQQR--L---------NFNVDVVESDWGEGA--------KLDVL----ASKLAAD--TAHTIKAICIVHNE 147 (367)
Q Consensus 93 ~~~~~~~~~~~~~--~---------g~~~~~v~~~~~~~~--------d~e~l----~~~i~~~--~~~~~~lv~~~~~~ 147 (367)
+|++......+.. . ...+..++.+...+. +.+.+ ++.+++. ..+++.+|++....
T Consensus 156 ~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiq 235 (459)
T PRK06931 156 GYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQ 235 (459)
T ss_pred CcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEcccc
Confidence 8888642111110 0 012333443321110 12322 3333321 11357888888887
Q ss_pred CCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHH
Q 017726 148 TATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKA 218 (367)
Q Consensus 148 n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~ 218 (367)
...|.+.+ +++++++|++ +|+++|.||.+...... +.......|+++. .|.++|...+|.+..++++
T Consensus 236 g~gG~~~~~~~yl~~lr~lc~~--~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~--gK~l~gG~Pi~av~~~~~~ 311 (459)
T PRK06931 236 GEGGVNPAPVEWLQKIREVTQK--HGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVM--SKAVGGGLPLAVLGIKKEF 311 (459)
T ss_pred CCCCCcCCCHHHHHHHHHHHHH--cCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEe--cccccCCcceeeeeeHHHH
Confidence 77787765 7889999999 99999999997643211 1222335788877 6888765557888887663
Q ss_pred HHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCcc
Q 017726 219 LEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKN 296 (367)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~ 296 (367)
+.+.+.. ..+ .+..+...+++..++++.+++++ ..++..+..++|.+.|+++ ..++
T Consensus 312 -~~~~~~~---------------~~~---T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~ 369 (459)
T PRK06931 312 -DAWQPGG---------------HTG---TFRGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPC 369 (459)
T ss_pred -hhccCCC---------------CCC---CCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4442110 112 33466667777788888887765 3446677777777777765 2333
Q ss_pred ccCCCccCCCceEEEEcCCCC-----------C---HHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 297 CTQKEEWFSDTVTAVIVPSHI-----------N---SSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~-----------~---~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
+..-. -.+.++.+.+.+.. + ...+.+.+.+ .||.+.+.- ..++.+|+.+....++++++
T Consensus 370 i~~vr--G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gvl~~~~~--~~~~~l~~~Ppl~it~~eid 442 (459)
T PRK06931 370 IGNVR--GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFE-NGLLLERGG--RNGNVVRLLPPLLITQAECE 442 (459)
T ss_pred eEeEe--cCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHH-CCcEEeecC--CCCCEEEEECCCCcCHHHHH
Confidence 32211 13334545542110 1 2346666654 599886531 12467999877766665543
No 378
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.46 E-value=2.9e-11 Score=104.61 Aligned_cols=309 Identities=16% Similarity=0.081 Sum_probs=186.2
Q ss_pred ChHHHHHHHccCCCC--CC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc--cCCCCCeEEEEeCCc
Q 017726 20 IPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIGQ 94 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~--~~~~gd~vl~~~~~~ 94 (367)
-.+++.+++.++... |. .-...+-..++.+.|...+-.+- ..+.|+|||++|+++++.- +....-.+|....+|
T Consensus 67 chP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l-~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~Y 145 (442)
T KOG1404|consen 67 CHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDL-KVVFFVNSGSEANELALKMARLYTGNLDIIARRNSY 145 (442)
T ss_pred CChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCc-eEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccc
Confidence 356777777776432 11 11112233455555665554332 2489999999999987753 122233677777778
Q ss_pred chHHHHHHHHHhCCceEEEeCC-----------CC---CCC--C---------HHHHHHHHhccCCCCccEEEEEecCCC
Q 017726 95 FSLLWIDQQQRLNFNVDVVESD-----------WG---EGA--K---------LDVLASKLAADTAHTIKAICIVHNETA 149 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~-----------~~---~~~--d---------~e~l~~~i~~~~~~~~~lv~~~~~~n~ 149 (367)
++.... .+...+.....-+.+ ++ +.+ + .++++..+...+.+++..++..+....
T Consensus 146 HG~t~~-t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGv 224 (442)
T KOG1404|consen 146 HGNTLY-TLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGV 224 (442)
T ss_pred cCCchh-hcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccC
Confidence 886421 111222221111110 00 000 1 134444554444356778888888888
Q ss_pred cccccc----HHHHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHH
Q 017726 150 TGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALE 220 (367)
Q Consensus 150 tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~ 220 (367)
-|.+.+ +++..++|++ +|.++|.|++++....- +.-...-.||++ ..|.++....+|.++.++++.+
T Consensus 225 gG~v~~p~GYlka~~~~v~k--~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~EIa~ 300 (442)
T KOG1404|consen 225 GGIVELPPGYLKAAYKVVRK--RGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTPEIAD 300 (442)
T ss_pred CccccCCchHHHHHHHHHHH--cCCEEEehhhhhccccccccccccccCCCccHHH--HHhhccCCCcceeeecCHHHHH
Confidence 888864 8899999999 99999999998754331 222222356654 5788877777899999999988
Q ss_pred HhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--CCcccc
Q 017726 221 ASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW--GLKNCT 298 (367)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 298 (367)
.+..... ++ +.+..+....++-.+.|+.+.++ ++.++......+|.+.|.++ +.+++.
T Consensus 301 v~~~~~~---~f--------------nTyggnP~a~avg~aVL~Vikee---~LqE~aa~vG~yl~~~l~~l~d~h~iIG 360 (442)
T KOG1404|consen 301 VLNQKSS---HF--------------NTYGGNPVACAVGLAVLKVIKEE---NLQENAAEVGSYLLEKLAALKDKHPIIG 360 (442)
T ss_pred HHHhccc---cc--------------cccCCCchhHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 7765422 11 12223333334445577777765 56668888999999999996 677777
Q ss_pred CCCccCCCceEEEEcCCCC----CH-----HHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHH
Q 017726 299 QKEEWFSDTVTAVIVPSHI----NS-----SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMF 359 (367)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~----~~-----~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~ 359 (367)
+-.. .+.++-+.+-++. ++ ..+-+.++ ++|+.| |.....++.|||++--.++.+|+
T Consensus 361 dVRG--~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~ck-e~Gvlv--g~g~i~G~vfriaPPlciT~edi 425 (442)
T KOG1404|consen 361 DVRG--RGLMLGVELVSDKSEPKPPATAEGAVIGEQCK-ELGVLV--GKGGIHGNVFRIAPPLCITKEDI 425 (442)
T ss_pred eccc--ceeEEEEEEecccCCCCCcchHHHHHHHHHHH-HhCeee--ecccccceEEEecCCeeccHHHH
Confidence 5221 2223333331111 11 13556664 569999 55556677999998778888777
No 379
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.45 E-value=1e-11 Score=111.73 Aligned_cols=227 Identities=22% Similarity=0.211 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC--------CCCCeEEEEeCCcchHHHHHHHH------H
Q 017726 40 VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL--------SPGDRIISFLIGQFSLLWIDQQQ------R 105 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~------~ 105 (367)
..+...++.+.|.+.++- ..+.+.+++||++|++.++.... ....+|+....+|++........ +
T Consensus 57 ~~~~~~~la~~L~~~~p~-~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 135 (339)
T PF00202_consen 57 THPEAAELAEKLAELFPG-GLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYR 135 (339)
T ss_dssp EEHHHHHHHHHHHHHSST-TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHH
T ss_pred eccchhhhhhhhhhcccc-ccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccc
Confidence 345667888888888844 23469999999999999886433 23457888888888753211110 0
Q ss_pred --hC---CceEEEeCCCCCC-----CCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HHHHHHHHHhcCCCcE
Q 017726 106 --LN---FNVDVVESDWGEG-----AKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LSKVRKLLDEYRHPAL 171 (367)
Q Consensus 106 --~g---~~~~~v~~~~~~~-----~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~~i~~~~~~~~~~~~ 171 (367)
.+ ..+..+|.+.... -..+.+++.+.+...++..+|++.......|...+ +++++++|++ +|++
T Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~--~gil 213 (339)
T PF00202_consen 136 KGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCRE--HGIL 213 (339)
T ss_dssp TTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHH--TT-E
T ss_pred ccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccc--cccc
Confidence 11 2345566552111 01122333333321146778888888877787764 7889999999 9999
Q ss_pred EEEeeeeccCce-----eeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCc
Q 017726 172 FLVDGVSSICAI-----DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTF 246 (367)
Q Consensus 172 vi~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
+|+||++..... ........+|+++++ |.+++...+|.+++++++.+.+..... +.
T Consensus 214 lI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~----------------~~- 274 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQPGSH----------------GS- 274 (339)
T ss_dssp EEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSS----------------TC-
T ss_pred eecccccccccccCCccceecccccCcccccc--cchhhhhhcccccccchhhcccccccc----------------cc-
Confidence 999999874321 122233457999885 999877668999999998776643211 11
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc
Q 017726 247 WPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW 292 (367)
Q Consensus 247 ~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 292 (367)
.+..+...+++..++++.+++.++ .++..+..++|.+.|+++
T Consensus 275 -T~~g~p~~~aaa~~~l~~~~~~~~---~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 275 -TFGGNPLSCAAALATLEILEEEDL---LERVRELGERLREGLREL 316 (339)
T ss_dssp -TTTT-HHHHHHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHH
T ss_pred -ccccchHhhhhhhhHHHhhccHHH---HHHHHHHHHHHHHHHHHH
Confidence 334666677788888888888753 345566677777777664
No 380
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.44 E-value=2.2e-11 Score=113.10 Aligned_cols=222 Identities=17% Similarity=0.142 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc-CCCC-CeEEEE-eCCcchHH-HHHH--HHHhCCc--e--EEE
Q 017726 44 TKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT-LSPG-DRIISF-LIGQFSLL-WIDQ--QQRLNFN--V--DVV 113 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~-~~~g-d~vl~~-~~~~~~~~-~~~~--~~~~g~~--~--~~v 113 (367)
..++.+.|.+++.. .+.+.|++||++|++.++... .-.| .+|+.. ..++++.. +... ....+.. . ..+
T Consensus 90 ~~~la~~l~~~~p~--~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~ 167 (431)
T PRK06209 90 ELDAAESFLELIDG--ADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV 167 (431)
T ss_pred HHHHHHHHHHhCCc--cceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc
Confidence 34667777777632 236999999999999988742 1123 345444 22333211 1000 0000110 0 011
Q ss_pred eCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceee---c-ccc
Q 017726 114 ESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDF---R-MDE 189 (367)
Q Consensus 114 ~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~---~-~~~ 189 (367)
... .-|++++++++++.. .++.+|++.......+....++++.++|++ +|+++|+|+++....... . ...
T Consensus 168 ~~~---~~d~~~l~~~l~~~~-~~~aavi~Epv~g~~~~~~~l~~l~~lc~~--~g~lLI~DEv~tG~~~~~~g~~~~~g 241 (431)
T PRK06209 168 TFR---YNDIASLEALFEDHP-GRIACVILEPATADEPQDGFLHEVRRLCHE--NGALFILDEMITGFRWHMRGAQKLYG 241 (431)
T ss_pred ccC---CCCHHHHHHHHHhCC-CCEEEEEEccccCCCCCHHHHHHHHHHHHH--cCCEEEEEcccccCCcCcchhhHHhC
Confidence 111 127899999987543 356677776543222222238899999999 999999999875322211 0 112
Q ss_pred ccceEEEecCCCcccCCCcceeeeeCHHHHHH--hccCC-CCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHH
Q 017726 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEA--SKTAK-SVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLI 266 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~ 266 (367)
...|+++ .+|.+++...+|.+++++++.+. +.... ...+.. ++ .++++...+++..++++.+
T Consensus 242 v~PDi~t--~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~-----------~~--T~~~np~~~aaa~a~l~~i 306 (431)
T PRK06209 242 IVPDLSC--FGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLL-----------ST--THGAETHALAAAIATMAIY 306 (431)
T ss_pred CCcceee--ehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceee-----------cc--CCCCCHHHHHHHHHHHHHH
Confidence 2467654 58999765446889999888765 21110 011111 22 3456677778888899998
Q ss_pred HHhChHHHHHHHHHHHHHHHHHHHH
Q 017726 267 FEEGLENVIERHRRLGKATRLAVEA 291 (367)
Q Consensus 267 ~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (367)
.+++ +.++..++.+++++.|++
T Consensus 307 ~~~~---~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 307 RDED---VIERLHEQGAKLAAGVNE 328 (431)
T ss_pred hccC---HHHHHHHHHHHHHHHHHH
Confidence 8765 344556666666666655
No 381
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.42 E-value=3.3e-10 Score=111.38 Aligned_cols=212 Identities=17% Similarity=0.062 Sum_probs=131.0
Q ss_pred HHHHHHHhc----cCCCCccEEEEEec-CCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce-----eecccc
Q 017726 124 DVLASKLAA----DTAHTIKAICIVHN-ETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI-----DFRMDE 189 (367)
Q Consensus 124 e~l~~~i~~----~~~~~~~lv~~~~~-~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~-----~~~~~~ 189 (367)
+.+++.|++ ...+++.+|++... ....|.+.+ ++.++++|++ +|+++|.||++..... ..+...
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~--~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRS--RKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH--hCCEEEEeecccCCCcccchhhHHhcC
Confidence 456666653 11146778888874 677788775 7789999999 9999999999864422 122223
Q ss_pred ccceEEEecCCCcccCC-CcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH
Q 017726 190 WGIDVALTGSQKALSLP-TGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (367)
Q Consensus 190 ~~~d~~~~s~~K~~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~ 268 (367)
...|+++. .|.++|. ..+|.+.+++++.+.+....... .+..+. .++.+..++++..++|+.+++
T Consensus 645 v~PDIi~~--gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~----------~~~hg~--Ty~gnpl~cAaala~L~~~~~ 710 (817)
T PLN02974 645 CKPDIACY--AKLLTGGLVPLAATLATEEVFEAFRGPSKLD----------ALLHGH--SYTAHPMGCAAAAKALQWYKD 710 (817)
T ss_pred CCCCEEee--cccccCCCCccEEEEEcHHHHHhhccccccC----------CcccCC--CCCcCHHHHHHHHHHHHHHHc
Confidence 35788877 6888776 35899999999988774210000 011132 446777777888888999888
Q ss_pred hC-hHHHHHHHHHHHHHHHHHHH-Hc-CCccccCCCccCCCceEEEEcCCCC--------CHHHHHHHHHhhCCeEEccC
Q 017726 269 EG-LENVIERHRRLGKATRLAVE-AW-GLKNCTQKEEWFSDTVTAVIVPSHI--------NSSEIVRRAWQRYNLSLGLG 337 (367)
Q Consensus 269 ~g-~~~~~~~~~~~~~~l~~~L~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~L~~~~gv~v~~g 337 (367)
++ .+.+.++..++.+++.+.|. .+ ..+.+..-. -.+.+..+.+.++. -...+.+.+..++||.+++.
T Consensus 711 ~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR--g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~ 788 (817)
T PLN02974 711 PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV--SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL 788 (817)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE--eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec
Confidence 75 44555666667777776663 33 333333211 13345555552211 12457777763559999762
Q ss_pred CCCCCCcEEEEeecCCCCHHH
Q 017726 338 LNKVAGKVFRIGHLGHLNEVM 358 (367)
Q Consensus 338 ~~~~~~~~iRi~~~~~~~~~~ 358 (367)
++.+|+..-...++++
T Consensus 789 -----Gnvi~l~pP~~i~~e~ 804 (817)
T PLN02974 789 -----GNVVYLMCGPTTSPET 804 (817)
T ss_pred -----CCEEEEeCCCCCCHHH
Confidence 3678886545444443
No 382
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.3e-10 Score=102.76 Aligned_cols=295 Identities=16% Similarity=0.073 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHhcCCC--------CceEEecCChhHHHHHHHHcc-------CCC-----------CCeEEEEeCCc
Q 017726 41 PALTKTLLEDIKKIFKTTS--------GTPFLIPTTGTGAWESALTNT-------LSP-----------GDRIISFLIGQ 94 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~--------~~~v~~~~ggt~al~~~~~~~-------~~~-----------gd~vl~~~~~~ 94 (367)
.++..-.-++++++++++. +-.-++.++++++...++.+. ... ++-|.+.....
T Consensus 112 TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqa 191 (511)
T KOG0628|consen 112 TELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQA 191 (511)
T ss_pred HHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcc
Confidence 3333445577788777762 112355577778887766431 111 22344444433
Q ss_pred chHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCC--CccEEEEEecCCCccccccHHHHHHHHHhcCCCcEE
Q 017726 95 FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAH--TIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALF 172 (367)
Q Consensus 95 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~--~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~v 172 (367)
++. ..+.+...|++++.++.+.+..++.+.|+++|+++-+. -|-.++.+-..+.+-...++.++..+|++ +|+|+
T Consensus 192 hss-veka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~--~glWL 268 (511)
T KOG0628|consen 192 HSS-VEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE--EGLWL 268 (511)
T ss_pred cch-HHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh--cCEEE
Confidence 433 34678888999999999988899999999999884211 12233333333333355679999999999 99999
Q ss_pred EEeeeeccCcee---eccc---cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCcee---------echHHH
Q 017726 173 LVDGVSSICAID---FRMD---EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVF---------FDWKDY 237 (367)
Q Consensus 173 i~D~~~~~~~~~---~~~~---~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 237 (367)
++|++|+..+.- ++.- -..+|.+.+.+|||+..-..+..++.++... -.........+ .|+..|
T Consensus 269 HVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~-~~~~~~vdp~yL~h~~~~~~~Dyrhw 347 (511)
T KOG0628|consen 269 HVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTK-LSRAFNVDPLYLKHAYQGSAPDYRHW 347 (511)
T ss_pred EeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCce-eeeeeecChHhhcchhhccCCCcccc
Confidence 999999854322 1110 1147999999999997666677777766520 01111111111 122222
Q ss_pred HHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEcCC-
Q 017726 238 IKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIVPS- 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
..-+ ++ -..-+-++..++.+.-+++++.+++..++++.+.+.+.+- .|++..+ +--.+++|++..
T Consensus 348 qipl--~r-------RfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~----~~lgLvcFRlk~~ 414 (511)
T KOG0628|consen 348 QIPL--GR-------RFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK----RILGLVCFRLKGD 414 (511)
T ss_pred cccc--cc-------chhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc----cccceeEEeecCC
Confidence 1100 10 0111345666777777778888888899999988888775 6888776 455688999832
Q ss_pred CCCHHHHHHHHHhhCCeEEccCCCCCCCcE-EEEeecCCC
Q 017726 316 HINSSEIVRRAWQRYNLSLGLGLNKVAGKV-FRIGHLGHL 354 (367)
Q Consensus 316 ~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~-iRi~~~~~~ 354 (367)
+...+.|.+++....+|.+.+.. ..+.+ +|++.-...
T Consensus 415 N~~ne~Ll~~in~~g~i~l~~~~--l~gk~vlRf~V~s~~ 452 (511)
T KOG0628|consen 415 NEINEALLNRLNSSGRIHLVPAS--LHGKFVLRFAVCSPL 452 (511)
T ss_pred cHHHHHHHHHHHhcCcEEEEEee--ecceEEEEEEecCCC
Confidence 23456788989877677776543 23455 899865543
No 383
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.7e-10 Score=100.58 Aligned_cols=248 Identities=17% Similarity=0.110 Sum_probs=157.9
Q ss_pred ChHHHHHHHccCCCC--CC-CCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHcc---C---CC--CCeEE
Q 017726 20 IPDQVIRAMNRNNED--YR-SPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNT---L---SP--GDRII 88 (367)
Q Consensus 20 ~~~~v~~a~~~~~~~--~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~---~---~~--gd~vl 88 (367)
..+++.+++.+.... |. ...+....-++.+.+.+.++-...+.|.|++|||+|++.++... . .+ ...+|
T Consensus 73 anpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~I 152 (433)
T KOG1401|consen 73 ANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFI 152 (433)
T ss_pred CCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEE
Confidence 377888888886543 22 22223335677888888887767778999999999999988531 1 11 12588
Q ss_pred EEeCCcchHHHHHHHHHhCCceEEEeCC---CC----CCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc----HH
Q 017726 89 SFLIGQFSLLWIDQQQRLNFNVDVVESD---WG----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN----LS 157 (367)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~----~~ 157 (367)
....+|++.... ++...+..-...+.+ ++ ..-|..++++.++.+. ....+|++....--.|.... +.
T Consensus 153 af~nsyHG~tlg-als~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~-~~IaAVIvEPiqGaGG~~p~~peFl~ 230 (433)
T KOG1401|consen 153 AFENSYHGRTLG-ALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK-GEIAAVIVEPIQGAGGIIPADPEFLI 230 (433)
T ss_pred EEecCcCCcchh-HHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC-CceEEEEEecccCCCCcccCCHHHHH
Confidence 888888886432 222223222222211 11 1127899999999865 34678888877766676653 66
Q ss_pred HHHHHHHhcCCCcEEEEeeeeccCcee-----eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceee
Q 017726 158 KVRKLLDEYRHPALFLVDGVSSICAID-----FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFF 232 (367)
Q Consensus 158 ~i~~~~~~~~~~~~vi~D~~~~~~~~~-----~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
.|+++|++ +++++|.||.+.....- ...-....|+.+. .|.++|...+|...++.++.+.+.+...
T Consensus 231 ~L~k~C~~--~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~--aK~L~gGlPigA~~v~~kV~~~i~~~~~----- 301 (433)
T KOG1401|consen 231 GLRKECDD--NGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTV--AKPLGGGLPIGATGVRDKVAEMISPGDH----- 301 (433)
T ss_pred HHHHHHhh--cCceEEeehhhhCccccchHHHHHHhCcCCcceee--hhhccCCceeEEEeehHHHHhhcCCCCc-----
Confidence 79999999 99999999998642221 1111234677665 6888777668999999999888876432
Q ss_pred chHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Q 017726 233 DWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEA 291 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~ 291 (367)
+..|+ .++.+..++.+...+++++.+.+ ..++..+..+.|++.|.+
T Consensus 302 --------l~hg~--Tf~gnpLacsa~~~~l~~l~~~e---~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 302 --------LYHGG--TFSGNPLACSAGIKVLDELKDPE---TLKNVSKIGKELRKLLDE 347 (433)
T ss_pred --------cccCc--ccCCChhhhhHHHHHHHHHcCHH---HHHHHHHHHHHHHHHHHH
Confidence 11233 34566666666677777776653 334444455555555544
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.31 E-value=4.7e-11 Score=105.16 Aligned_cols=287 Identities=14% Similarity=0.096 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhcCCCCceEEecCChh-HHHHHHHHccC--CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCC-
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPFLIPTTGT-GAWESALTNTL--SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDW- 117 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v~~~~ggt-~al~~~~~~~~--~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~- 117 (367)
...+.+...+-+..|+......++++-+| .++.+++.++. ..++.|+.+..++.+-. ..++..|.+++.|+...
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~--kai~~AGl~~~vV~~~~~ 133 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF--KAIERAGLEPVVVENVLE 133 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH--HHHHHTT-EEEEE-EEEE
T ss_pred HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH--HHHHhcCCeEEEeeccCC
Confidence 44555666666678887544456677777 44455555543 56788999988887643 56778899999998532
Q ss_pred -CC-CCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc-HHHHHHHHHhcCCCcEEEEeeeecc--------------
Q 017726 118 -GE-GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN-LSKVRKLLDEYRHPALFLVDGVSSI-------------- 180 (367)
Q Consensus 118 -~~-~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~-~~~i~~~~~~~~~~~~vi~D~~~~~-------------- 180 (367)
+. ..|.+.+++++++.+ +.+.+.++++.+-..|...| +++|.++|++ +|++.++..||+.
T Consensus 134 ~d~l~td~~~ie~~i~~~G-~~~iLcvltttscfapr~~D~i~~IakiC~~--~~IPhlvNnAYgvQ~~~~~~~i~~a~~ 210 (389)
T PF05889_consen 134 GDELITDLEAIEAKIEELG-ADNILCVLTTTSCFAPRLPDDIEEIAKICKE--YDIPHLVNNAYGVQSSKCMHLIQQAWR 210 (389)
T ss_dssp TTEEEEHHHHHHHHHHHHC-GGGEEEEEEESSTTTTB----HHHHHHHHHH--HT--EEEEGTTTTT-HHHHHHHHHHHH
T ss_pred CCeeeccHHHHHHHHHHhC-CCCeEEEEEecCccCCCCCccHHHHHHHHHH--cCCceEEccchhhhHHHHHHHHHHHHh
Confidence 22 347889999997754 45577789999888898888 9999999999 9999999999998
Q ss_pred -CceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHH
Q 017726 181 -CAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGL 259 (367)
Q Consensus 181 -~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 259 (367)
|-++..+...+.||++-++||.+++ ..+..+..+..... |. .+.....-+
T Consensus 211 ~GRvda~vqS~dkNF~VPvGgai~As--------~~~~~i~~vs~~Yp----------------GR-----as~sp~ld~ 261 (389)
T PF05889_consen 211 VGRVDAFVQSTDKNFMVPVGGAIMAS--------FDPSGILAVSKEYP----------------GR-----ASASPSLDL 261 (389)
T ss_dssp HSTCSEEEEEHHHHHCEESSHEEEEE--------SSHHHHHHHHHTSH----------------SH-----BTSHHHHHH
T ss_pred cCCcceeeeecCCCEEecCCCcEEEe--------cCHHHHHHHHHHhh----------------hh-----hhcccchHH
Confidence 5555555544555555555554442 23455655543211 21 111111233
Q ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc----CCccccCCCccCCCceEEEEcCC--C---CCHHHHHHHHHhhC
Q 017726 260 RAALDLIFEEGLENVIERHRRLGKATRLAVEAW----GLKNCTQKEEWFSDTVTAVIVPS--H---INSSEIVRRAWQRY 330 (367)
Q Consensus 260 ~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~l~~~L~~~~ 330 (367)
--.+..+...|+........+...++.++|++. +-.+.. .+ +....+.+.++. . .+...|...|..+
T Consensus 262 ~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~-~p--~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R- 337 (389)
T PF05889_consen 262 FITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLE-TP--RNHISMAFTLDTLYEISQKDGTFLGSMLFKR- 337 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS-ST--T-SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CC--CCCeeEEEECccchhhccchhhhHHHHHHhC-
Confidence 445555556667777777888888888888775 422222 12 233345566531 1 1235788888755
Q ss_pred CeEEcc----CCC-------CCCCcEEEE-eecC-CCCHHHHHHhhhhc
Q 017726 331 NLSLGL----GLN-------KVAGKVFRI-GHLG-HLNEVMFNFQLLFQ 366 (367)
Q Consensus 331 gv~v~~----g~~-------~~~~~~iRi-~~~~-~~~~~~~~~~~l~~ 366 (367)
+|.=.. +.. ..+-.++-+ +..| ..++.|.+.+.|++
T Consensus 338 ~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k 386 (389)
T PF05889_consen 338 GVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDK 386 (389)
T ss_dssp TEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHH
T ss_pred CcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 653211 111 123367888 4344 34455666666553
No 385
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.30 E-value=5.2e-10 Score=96.91 Aligned_cols=320 Identities=15% Similarity=0.103 Sum_probs=199.1
Q ss_pred CCCCcccccCCCCCChHHHHHHHccCCCC---CCC-CcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC
Q 017726 6 APGKNHLFVPGPVHIPDQVIRAMNRNNED---YRS-PAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL 81 (367)
Q Consensus 6 ~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~~-~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~ 81 (367)
..+.|++...+-..+-+++...+.+++.. +++ |+-.+....+++.|++++|.++ .+++. -|-.++..++.++.
T Consensus 99 ~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~--aivYs-~gF~ti~S~ipafs 175 (467)
T KOG1358|consen 99 FASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED--AIVYS-YGFSTIESAIPAFS 175 (467)
T ss_pred ccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc--eeeec-cccchhhhcchhhh
Confidence 45677888888888999999999998654 222 3445667789999999999987 46774 45577777888999
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC-----CCC----ccEEEEEecCCCccc
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT-----AHT----IKAICIVHNETATGV 152 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~-----~~~----~~lv~~~~~~n~tG~ 152 (367)
..||.+.+...-+|. .+...+...-.+.....+ |.+++++.+.+.+ .+| -+.|+....--++|.
T Consensus 176 KrGDIi~~de~~nfa--Iq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~ 248 (467)
T KOG1358|consen 176 KRGDIIFVDEAVNFA--IQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD 248 (467)
T ss_pred ccCcEEEEehhhhHH--HHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCc
Confidence 999988776664444 333334444455555544 6788877776643 011 245666777788999
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccCcee---------eccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhc
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSICAID---------FRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK 223 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~---------~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~ 223 (367)
+.|+.+|.++..+ +..-|++|+..++|... +.+....+|++++|+.-.+++ .| |+.+++.-++ .-+
T Consensus 249 i~pl~~iv~lk~K--yk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~G-gFc~G~~~i~-~hQ 323 (467)
T KOG1358|consen 249 ICPLPEIVKLKNK--YKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GG-GFCAGKSFIA-DHQ 323 (467)
T ss_pred ccccHHHHHHHhh--heEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cC-ceeecceeeE-eee
Confidence 9999999999999 99999999998876542 122222579999998776643 22 5555543321 111
Q ss_pred cCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCc
Q 017726 224 TAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEE 302 (367)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 302 (367)
.. ....|. ++.-.|+... .+...++..+..+ .++.+..+.....+.+.|... ++.+.++
T Consensus 324 rL-Sg~~Y~-------------fSAslPp~la-~aa~~ai~i~~~~--p~~~~~L~~k~~~~H~~l~~~s~~~v~~~--- 383 (467)
T KOG1358|consen 324 RL-SGSGYC-------------FSASLPPYLA-GAAIKAILIEEWN--PEIVQPLRAKVAKFHAALSSNSGFIVSGS--- 383 (467)
T ss_pred ec-ccccee-------------eeccCchhhh-hhHHHHHHHHhhC--cchhhhhhccccccchhhhcCCceEEecC---
Confidence 11 111111 1122344433 3333355555544 236667777788888888886 6777665
Q ss_pred cCCCceEEEEcCCC-CC---H----HHHHHHHHhhCCeEEccC-----CCC-CCCcEEEEeecCCCCHHHHHHh
Q 017726 303 WFSDTVTAVIVPSH-IN---S----SEIVRRAWQRYNLSLGLG-----LNK-VAGKVFRIGHLGHLNEVMFNFQ 362 (367)
Q Consensus 303 ~~~~~~~~~~~~~~-~~---~----~~l~~~L~~~~gv~v~~g-----~~~-~~~~~iRi~~~~~~~~~~~~~~ 362 (367)
...+++.+.+.+. .+ . +++++....+ ++.+... ... .-...+||++....+++++...
T Consensus 384 -~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra 455 (467)
T KOG1358|consen 384 -PESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERA 455 (467)
T ss_pred -cCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHH
Confidence 2334555665321 11 1 1344444444 6666432 111 1234699998888887766554
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.23 E-value=1.2e-09 Score=100.25 Aligned_cols=301 Identities=15% Similarity=0.121 Sum_probs=184.7
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHH---HHHHHccC-CCCC----eEEEEeCCcchHHHHHHHHHhCCce
Q 017726 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW---ESALTNTL-SPGD----RIISFLIGQFSLLWIDQQQRLNFNV 110 (367)
Q Consensus 39 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al---~~~~~~~~-~~gd----~vl~~~~~~~~~~~~~~~~~~g~~~ 110 (367)
++.+...++++.+.++.|.+.-. +-.++|..+= ..++++.. .+|+ ..+++...|..+.. .+...|.++
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~~s--~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--SA~Magmkv 654 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDSFS--LQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--SAAMAGMKV 654 (1001)
T ss_pred hHHHHHHHHHHHhheeeccccee--ecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--hHHhcCCEE
Confidence 45677778888888888877521 3334443322 23455543 2332 45667776666553 256789999
Q ss_pred EEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-cHHHHHHHHHhcCCCcEEEEeeeeccCcee-eccc
Q 017726 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDEYRHPALFLVDGVSSICAID-FRMD 188 (367)
Q Consensus 111 ~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~-~~~~ 188 (367)
+.|.++.++.+|..+|.++.+++. ++-.++.++.|+ ..|... .+++++++.|+ ||.-|..|++......- ....
T Consensus 655 vpV~~~~~G~id~~dLk~kaekh~-~~Laa~MvTYPS-T~GvfE~~i~d~cd~iHe--hGGQVYlDGANMNAqVGlc~pG 730 (1001)
T KOG2040|consen 655 VPVGCDANGNIDMVDLKAKAEKHK-DNLAALMVTYPS-THGVFEEGIDDICDIIHE--HGGQVYLDGANMNAQVGLCRPG 730 (1001)
T ss_pred EEeeccCCCCccHHHHHHHHHHhh-hhhheeEEeccc-ccccccccHHHHHHHHHh--cCCEEEecCCCccceecccCCc
Confidence 999999999999999999998875 556677777775 467665 59999999999 99999999886432221 1334
Q ss_pred cccceEEEecCCCcccCC-----CcceeeeeCHHHHHHhccCCCCce-eechHHHHHHhhcCCccCCCCcHHHHHHHHHH
Q 017726 189 EWGIDVALTGSQKALSLP-----TGMGIVCASPKALEASKTAKSVRV-FFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAA 262 (367)
Q Consensus 189 ~~~~d~~~~s~~K~~~g~-----~g~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~a 262 (367)
..|.|+.....||+|+-| +|+|-+.+++.+...+.....-+. ......-..-..+ .||... ..+--.++.
T Consensus 731 d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsa---aP~Gsa-~ILpISwaY 806 (1001)
T KOG2040|consen 731 DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSA---APWGSA-LILPISWAY 806 (1001)
T ss_pred cccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceec---cCCCcc-eeehhHHHH
Confidence 568999999999999644 556777777766655543322110 0000000000000 122111 111234667
Q ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccCCCccCCCceEEEEc-----CCCCCHHHHHHHHHhhCCeEEcc
Q 017726 263 LDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQKEEWFSDTVTAVIV-----PSHINSSEIVRRAWQRYNLSLGL 336 (367)
Q Consensus 263 l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~L~~~~gv~v~~ 336 (367)
++.+...|++..-+...-|++|+.++|+.. .+-...... ....-+.+++ ..++++.+++++|. .+|+..-.
T Consensus 807 ikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~--~vaHEFIlD~r~fK~~agieavDvAKRL~-DYgFHaPT 883 (1001)
T KOG2040|consen 807 IKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENG--LVAHEFILDLRPFKKTAGIEAVDVAKRLM-DYGFHAPT 883 (1001)
T ss_pred HHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCc--ceeeeeeeechhhccccCCcHHHHHHHHH-hccCCCCc
Confidence 788888889988888999999999999996 332222211 1111222332 24578889999996 55764332
Q ss_pred CCCCCCCcEEEEeecCCCC
Q 017726 337 GLNKVAGKVFRIGHLGHLN 355 (367)
Q Consensus 337 g~~~~~~~~iRi~~~~~~~ 355 (367)
-.+|. .+.+=|-+.-.++
T Consensus 884 mswPV-~gtLMIEPTESE~ 901 (1001)
T KOG2040|consen 884 MSWPV-AGTLMIEPTESED 901 (1001)
T ss_pred ccccc-CCceEeccCcccc
Confidence 22332 3445554433333
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.14 E-value=1.6e-08 Score=86.97 Aligned_cols=290 Identities=16% Similarity=0.131 Sum_probs=174.8
Q ss_pred CCCCChHHHHHHHccCCCCCCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccC-----CCCCeEEEE
Q 017726 16 GPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTL-----SPGDRIISF 90 (367)
Q Consensus 16 ~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~-----~~gd~vl~~ 90 (367)
|...+....+.+|..--..+.+. .-+..+.+.+++++|.+. ++.|.-|-+|=++++..++ .||.+.+++
T Consensus 56 GTgams~~qwaamm~GDEAYags---rs~~~L~~avkdifGfq~---~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~ 129 (471)
T COG3033 56 GTGAMTDKQWAAMMRGDEAYAGS---RSYYALADAVKDIFGFQY---TIPTHQGRGAENILIPILIKKGEQEPGSKMVAF 129 (471)
T ss_pred CcccccHHHHHHHhccchhhccc---ccHHHHHHHHHHhcCcee---eeeccCCccHHHHHHHHHhhhccccCCcccccc
Confidence 56667777777777643332211 223467778888998643 5666666666665554443 466666777
Q ss_pred eCCcchHHHHHHHHHhCCceEEEeCCC----------CCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc-ccc---cH
Q 017726 91 LIGQFSLLWIDQQQRLNFNVDVVESDW----------GEGAKLDVLASKLAADTAHTIKAICIVHNETATG-VTN---NL 156 (367)
Q Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~v~~~~----------~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG-~~~---~~ 156 (367)
.+.||...- ...+..|..++.++.++ .+.+|++.|++.|++-+.+++-.|+++-.+|..| ... ++
T Consensus 130 sN~~FdTTr-~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~ 208 (471)
T COG3033 130 SNYHFDTTR-GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANM 208 (471)
T ss_pred ccceecchh-HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhH
Confidence 777776532 22355677777666543 2568999999999996656666776665555555 333 57
Q ss_pred HHHHHHHHhcCCCcEEEEeeeec----cC-------ceeecccc------ccceEEEecCCCcccCCCcceeeeeCHH--
Q 017726 157 SKVRKLLDEYRHPALFLVDGVSS----IC-------AIDFRMDE------WGIDVALTGSQKALSLPTGMGIVCASPK-- 217 (367)
Q Consensus 157 ~~i~~~~~~~~~~~~vi~D~~~~----~~-------~~~~~~~~------~~~d~~~~s~~K~~~g~~g~g~~~~~~~-- 217 (367)
+++.++|++ +++.++.|++-- .+ -..-...+ ..+|-.+.|.-|--...-| |+++.+++
T Consensus 209 r~v~~ia~k--y~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~ 285 (471)
T COG3033 209 KAVYEIAKK--YDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSF 285 (471)
T ss_pred HHHHHHHHH--cCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccH
Confidence 889999999 999999997621 10 00111110 1368888888776444454 89998877
Q ss_pred --HHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHcCCc
Q 017726 218 --ALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295 (367)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~ 295 (367)
+...+...... +-|.-+.+...--.+.++...|....+. ...++..+-.++|.+.|.+.|++
T Consensus 286 fDvy~~~~~~~V~-------------~eG~~tYGgl~GrdmealAvGL~e~~~~---~yl~~Rv~Qv~YL~~~l~~~GVp 349 (471)
T COG3033 286 FDVYEECRTLVVV-------------QEGFPTYGGLAGRDMEALAVGLREGVNF---DYLAHRVAQVQYLADGLEEAGVP 349 (471)
T ss_pred HHHHHHHHhheEe-------------eccccccCcccchhHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHhcCCe
Confidence 33333322110 0111112234444455566555544333 22334455567999999999999
Q ss_pred cccCCCccCCCceEEEEcCC---C-----CCHHHHHHHHHhhCCeEEc
Q 017726 296 NCTQKEEWFSDTVTAVIVPS---H-----INSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~---~-----~~~~~l~~~L~~~~gv~v~ 335 (367)
++.| .+++-++++..+ . .++..|.-.|..+.||-..
T Consensus 350 i~~p----aGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRav 393 (471)
T COG3033 350 IVQP----AGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAV 393 (471)
T ss_pred eEec----CCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeee
Confidence 8887 445455555411 1 3455677777778888664
No 388
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.03 E-value=7e-09 Score=89.28 Aligned_cols=280 Identities=14% Similarity=0.076 Sum_probs=136.3
Q ss_pred HHHHHHHHHHH---hcC--CCCceEEecCChhHHHHHHHHccCC------CCCeEEEEeCCcchHHHHHHHHHhCCceEE
Q 017726 44 TKTLLEDIKKI---FKT--TSGTPFLIPTTGTGAWESALTNTLS------PGDRIISFLIGQFSLLWIDQQQRLNFNVDV 112 (367)
Q Consensus 44 ~~~~~~~la~~---~~~--~~~~~v~~~~ggt~al~~~~~~~~~------~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 112 (367)
..++++.|+++ .|- .++.-|++.+|+|+.++.++.++.. +.-+|+...| |++.. ......+.-....
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aP-YY~~Y-~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAP-YYSSY-PEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS---CHH-HHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCC-Cccch-HHHHHhccccCcc
Confidence 33455555444 442 2444589989999999998877532 1225666666 55543 2222323222222
Q ss_pred EeCCCCCCCCHHHHHHHHhccCCCCccEE-EEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCce-eeccccc
Q 017726 113 VESDWGEGAKLDVLASKLAADTAHTIKAI-CIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI-DFRMDEW 190 (367)
Q Consensus 113 v~~~~~~~~d~e~l~~~i~~~~~~~~~lv-~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~-~~~~~~~ 190 (367)
..-+ ..... ++. .....| ++++||||.|.+-. .+++. .+..+|.|-+|...+. ++.- ..
T Consensus 123 w~Gd------a~~~~---~~~--~~~~~IElVTSPNNPDG~lr~-----~V~~g--~~~k~I~D~AYYWPhyTpI~~-~a 183 (363)
T PF04864_consen 123 WAGD------ASNFK---NSD--NPSPYIELVTSPNNPDGQLRE-----AVLNG--SSGKVIHDLAYYWPHYTPITA-PA 183 (363)
T ss_dssp EEEE------CCCGT---T-S---CCGEEEEEESS-TTT-----------SSTT--TEEEEEEE-TT-STTTS---S--B
T ss_pred cccc------HHhhc---cCC--CCCCeEEEEeCCCCCcccccc-----hhcCC--CCcceeeeeeeecccccccCC-CC
Confidence 2222 11111 111 122455 99999999997631 12244 6778899999887664 2222 23
Q ss_pred cceEEEecCCCcccCCCc--ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH
Q 017726 191 GIDVALTGSQKALSLPTG--MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (367)
Q Consensus 191 ~~d~~~~s~~K~~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~ 268 (367)
+-|+++++.||. .|..| +|+.+++++.+.+-... .++.++ .+.+-- ++..+++++..
T Consensus 184 D~DiMLFT~SK~-TGHAGSR~GWAlVKD~~Va~kM~~--------------y~~lnT--iGvS~d----sQLRa~kiLk~ 242 (363)
T PF04864_consen 184 DHDIMLFTLSKL-TGHAGSRFGWALVKDEEVAKKMTK--------------YMELNT--IGVSRD----SQLRALKILKV 242 (363)
T ss_dssp --SEEEEEHHHH-CS-GGG-EEEEEES-HHHHHHHHH--------------HHHHHC--SS--HH----HHHHHHHHHHH
T ss_pred CCceEEEEEecc-cCccccccceeeecCHHHHHHHHH--------------HHHHhc--ccCcHH----HHHHHHHHHHH
Confidence 458999999994 57776 59999888775443321 111111 111111 12223333321
Q ss_pred ----h----C----hHHHHHHHHHHHHHHHHHHHHcC-Ccc--ccCC-------CccCCCceEEEEcCCCCCHHHHHHHH
Q 017726 269 ----E----G----LENVIERHRRLGKATRLAVEAWG-LKN--CTQK-------EEWFSDTVTAVIVPSHINSSEIVRRA 326 (367)
Q Consensus 269 ----~----g----~~~~~~~~~~~~~~l~~~L~~~g-~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~L 326 (367)
. | .+--.+...++-..|++.+.+.+ |.+ +.++ --..++.+.|++++.. ..++..+.|
T Consensus 243 v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-ed~DC~~~l 321 (363)
T PF04864_consen 243 VLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-EDEDCYAVL 321 (363)
T ss_dssp HHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-GGSSHHHHH
T ss_pred HHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-ccccHHHHH
Confidence 0 0 11112223333344444444432 221 1110 0012567889999533 335566666
Q ss_pred HhhCCeEEccCCCCC-CCcEEEEeecCCCCHHHHHHhhhhcC
Q 017726 327 WQRYNLSLGLGLNKV-AGKVFRIGHLGHLNEVMFNFQLLFQL 367 (367)
Q Consensus 327 ~~~~gv~v~~g~~~~-~~~~iRi~~~~~~~~~~~~~~~l~~~ 367 (367)
+ ++||.-+.|.... ...++|+|+....++.|++.+.|..+
T Consensus 322 ~-~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 322 R-EAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp H-CTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred H-hCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 4 6699999986543 45789999988888888888877653
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.61 E-value=7.2e-06 Score=76.11 Aligned_cols=307 Identities=15% Similarity=0.151 Sum_probs=171.4
Q ss_pred CChHHHHHHHccC-CC-CCC---CCcH----HHHHHHHHHHHHHHhcCCCCceEEecCChh---HHHHHHHHccCCCCCe
Q 017726 19 HIPDQVIRAMNRN-NE-DYR---SPAV----PALTKTLLEDIKKIFKTTSGTPFLIPTTGT---GAWESALTNTLSPGDR 86 (367)
Q Consensus 19 ~~~~~v~~a~~~~-~~-~~~---~~~~----~~~~~~~~~~la~~~~~~~~~~v~~~~ggt---~al~~~~~~~~~~gd~ 86 (367)
.+|+.++.-+.+. .+ ... .++. .+-.-.....++++.|++-...-++ .-|| +|+.++.+ ..++.+
T Consensus 131 ~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLL-DEgTAaaEAm~l~~~--~~krkk 207 (1001)
T KOG2040|consen 131 HVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLL-DEGTAAAEAMALCNR--INKRKK 207 (1001)
T ss_pred cCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhh-ccchhHHHHHHHHHh--hcccce
Confidence 4566666666652 11 111 1122 2334456788899999884332233 3344 44443333 345556
Q ss_pred EEEEeCCcchHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 87 IISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 87 vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
.++...-|+... ....++.+|+++... |+++...-. +.+..+++..| +..|.+.|..++.+.++
T Consensus 208 ~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~~~~~s~-----~~v~gvlvQYP-~t~G~i~d~~el~~~a~ 273 (1001)
T KOG2040|consen 208 FVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIKEADYSS-----KDVSGVLVQYP-DTEGSVLDFDELVELAH 273 (1001)
T ss_pred EEecCCCCcchhhhhhccccccceeEEec--------CHHHhhccc-----cceeEEEEEcC-CCCCcccCHHHHHHHhh
Confidence 666555555543 222233344443322 222222111 23456666655 56799999999999999
Q ss_pred hcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCc-----ceeeeeCHHHHHHhccCCCCceeec------
Q 017726 165 EYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTG-----MGIVCASPKALEASKTAKSVRVFFD------ 233 (367)
Q Consensus 165 ~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g-----~g~~~~~~~~~~~~~~~~~~~~~~~------ 233 (367)
. .+.++++-.---..++-=+..+.|+||+++|++.+ +-|.| .|++.++.++.+.+..... +...|
T Consensus 274 ~--~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRii-GvtkD~~gk~a 349 (1001)
T KOG2040|consen 274 A--NGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRII-GVTKDALGKEA 349 (1001)
T ss_pred c--cCceEEEeehhhHHHccCChhhcCceeeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceE-eeeecccccHH
Confidence 9 88776653221111222244567999999998874 33433 3788888888776655432 22211
Q ss_pred ----hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHH-----HhChHHHHHHHHHHHHHHHHHHHHcCCccccCCCccC
Q 017726 234 ----WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIF-----EEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304 (367)
Q Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~-----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 304 (367)
++...+..+.. --|+|+....|+.+-+..+- .+|++++.+++......|...|+..|.+++... ++
T Consensus 350 ~RLALQTREQHIrRD---KATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k~--fF 424 (1001)
T KOG2040|consen 350 YRLALQTREQHIRRD---KATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHKP--FF 424 (1001)
T ss_pred HHHHHHHHHHHhhhh---ccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcccc--cc
Confidence 11111211111 22466655445544444332 356999999999999999999999887766531 22
Q ss_pred CCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEEEEeecCCCCHHHHH
Q 017726 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVMFN 360 (367)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 360 (367)
.. +-+++. -+.+++.++..++ .|-++- ..++.+-+++.-+.+..|++
T Consensus 425 DT--LkI~~~--~s~~~~l~rA~~~-~iNlr~----~ed~tigvslDETv~~~Dvd 471 (1001)
T KOG2040|consen 425 DT--LKIRCG--CSAEEVLDRAAKR-QINLRL----VEDGTIGVSLDETVTEKDVD 471 (1001)
T ss_pred ce--EEEEec--CcHHHHHHHHHhh-cCceEE----eecCceEEeecccccHHHHH
Confidence 22 334552 2677888777655 555442 23456888876666666554
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.46 E-value=4e-05 Score=64.85 Aligned_cols=301 Identities=12% Similarity=0.068 Sum_probs=163.4
Q ss_pred CChHHHHHHHccCCCC-CCCCc--HHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc--cCCCCCeEEEEeCC
Q 017726 19 HIPDQVIRAMNRNNED-YRSPA--VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN--TLSPGDRIISFLIG 93 (367)
Q Consensus 19 ~~~~~v~~a~~~~~~~-~~~~~--~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~--~~~~gd~vl~~~~~ 93 (367)
...++|.++...+... ..... ..++.+-.+...+.+=+ -+...|++||++|+.++++. -+.+...||+.+..
T Consensus 61 hchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlPe---Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHA 137 (452)
T KOG1403|consen 61 HCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLPE---LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHA 137 (452)
T ss_pred cCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCCC---ceEEEEecCCchhhHHHHHHHHhhcccCceEEEech
Confidence 3455666666654332 11111 12334444444443333 34479999999999998864 23455568888887
Q ss_pred cchHHHHHHHHH--------hC-Cc---eEEEeCCC--CCCC--------C-----HHHHHHHHhccCC--CCccEEEEE
Q 017726 94 QFSLLWIDQQQR--------LN-FN---VDVVESDW--GEGA--------K-----LDVLASKLAADTA--HTIKAICIV 144 (367)
Q Consensus 94 ~~~~~~~~~~~~--------~g-~~---~~~v~~~~--~~~~--------d-----~e~l~~~i~~~~~--~~~~lv~~~ 144 (367)
|+++.. ...+. .+ .+ +...|+++ .+.. | .+.+++.+.+.-. .++.+++..
T Consensus 138 YHGHl~-s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAE 216 (452)
T KOG1403|consen 138 YHGHLQ-SVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAE 216 (452)
T ss_pred hcccee-eeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHH
Confidence 877631 11111 11 11 12223322 1111 1 2456666654211 345566777
Q ss_pred ecCCCcccccc----HHHHHHHHHhcCCCcEEEEeeeeccCce------eeccccccceEEEecCCCcccCCCcceeeee
Q 017726 145 HNETATGVTNN----LSKVRKLLDEYRHPALFLVDGVSSICAI------DFRMDEWGIDVALTGSQKALSLPTGMGIVCA 214 (367)
Q Consensus 145 ~~~n~tG~~~~----~~~i~~~~~~~~~~~~vi~D~~~~~~~~------~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~ 214 (367)
+.++--|.+.| .+++.+..+. +|.+.|.|+.+..+.. .+...+.-.||++. .|-++-....+.++.
T Consensus 217 slQSCGGQiiPPagYFq~Va~~Vr~--aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtm--gKpmGNGhPVa~Vat 292 (452)
T KOG1403|consen 217 SLQSCGGQIIPPAGYFQAVADAVRS--AGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTM--GKPMGNGHPVAAVAT 292 (452)
T ss_pred HHHhcCCcccCchhHHHHHHHHHhc--CCCeEEeehhhhcccccchhhhhhhhhccccchhee--cccCCCCCeeeEEec
Confidence 77788888876 4567777777 9999999999854332 11111112566655 566644444789999
Q ss_pred CHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc--
Q 017726 215 SPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-- 292 (367)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-- 292 (367)
.+++.+.+...-. .|+ ++ .+..++ ..+...+.++..+++ ++..+.++..++|...|+++
T Consensus 293 tkeIA~Af~atgv--~YF-----------NT--yGGnPV-sCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~ 353 (452)
T KOG1403|consen 293 TKEIAQAFHATGV--EYF-----------NT--YGGNPV-SCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQ 353 (452)
T ss_pred cHHHHHHhccccc--eeh-----------hc--cCCCch-hHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhh
Confidence 9999887764321 122 11 112333 233334455555554 45557777888888888775
Q ss_pred CCccccCCCccCCCceEEEEcCCC----C----CHHHHHHHHHhhCCeEEccCCCCCCCcEEEEee
Q 017726 293 GLKNCTQKEEWFSDTVTAVIVPSH----I----NSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH 350 (367)
Q Consensus 293 g~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~l~~~L~~~~gv~v~~g~~~~~~~~iRi~~ 350 (367)
..++++.-. -.+.++-+.+-++ . .+..+.-+|++.++|.+.. .+| ..+.+.|-+
T Consensus 354 kh~~IGDvR--GvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsa-DGP-h~NilKiKP 415 (452)
T KOG1403|consen 354 KHECIGDVR--GVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSA-DGP-HRNILKIKP 415 (452)
T ss_pred hccceeccc--cceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEec-CCC-CCceeecCC
Confidence 566666421 1222333333111 1 2334778888888888763 111 234566643
No 391
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.35 E-value=0.00025 Score=60.46 Aligned_cols=285 Identities=14% Similarity=0.112 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHH-hcCCC----CceE--EecCChhHHHHHHHHcc--CCCCCeEEEEeCCcchHHHHHHHHHhCC-ceEE
Q 017726 43 LTKTLLEDIKKI-FKTTS----GTPF--LIPTTGTGAWESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLNF-NVDV 112 (367)
Q Consensus 43 ~~~~~~~~la~~-~~~~~----~~~v--~~~~ggt~al~~~~~~~--~~~gd~vl~~~~~~~~~~~~~~~~~~g~-~~~~ 112 (367)
..+.+++..+++ +|.+. ++++ +-+-|||+|+.++..-+ +-....|.+++|.+..+. .+.+..|+ .+..
T Consensus 75 Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~--~if~~aGf~tv~~ 152 (410)
T KOG1412|consen 75 GLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHH--AIFEKAGFTTVAT 152 (410)
T ss_pred CchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHH--HHHHHcCCceeee
Confidence 345566555554 44431 2222 45568899998765422 223556888888655543 34566773 3333
Q ss_pred EeCC--CCCCCCHHHHHHHHhccCCCCccEEEEEe-cCCCccccccHHH---HHHHHHhcCCCcEEEEeeeeccC-ceee
Q 017726 113 VESD--WGEGAKLDVLASKLAADTAHTIKAICIVH-NETATGVTNNLSK---VRKLLDEYRHPALFLVDGVSSIC-AIDF 185 (367)
Q Consensus 113 v~~~--~~~~~d~e~l~~~i~~~~~~~~~lv~~~~-~~n~tG~~~~~~~---i~~~~~~~~~~~~vi~D~~~~~~-~~~~ 185 (367)
.+.= +...+|++.+...|+..+ +. .++++.. .+||||.=..-+. |.+..++ .+...+.|-+|..+ +-+.
T Consensus 153 Y~yWd~~~k~~d~e~~Lsdl~~AP-e~-si~iLhaCAhNPTGmDPT~EQW~qia~vik~--k~lf~fFDiAYQGfASGD~ 228 (410)
T KOG1412|consen 153 YPYWDAENKCVDLEGFLSDLESAP-EG-SIIILHACAHNPTGMDPTREQWKQIADVIKS--KNLFPFFDIAYQGFASGDL 228 (410)
T ss_pred eeeecCCCceecHHHHHHHHhhCC-CC-cEEeeeccccCCCCCCCCHHHHHHHHHHHHh--cCceeeeehhhcccccCCc
Confidence 3331 234689999998888654 22 3334443 4899996655555 4455555 88999999886432 2222
Q ss_pred cccc--------ccc-eEEEecCCCcccCCCc--c---eeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCC
Q 017726 186 RMDE--------WGI-DVALTGSQKALSLPTG--M---GIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTP 251 (367)
Q Consensus 186 ~~~~--------~~~-d~~~~s~~K~~~g~~g--~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (367)
+-+. .+. -|++-|+.|-|+ ..+ + -++.-++..+..+..... ...+ .+ +. .|
T Consensus 229 ~~DawAiR~fV~~g~e~fv~QSFaKNfG-lYneRvGnltvv~~n~a~i~~v~SQl~---------lviR---~~-~S-NP 293 (410)
T KOG1412|consen 229 DADAWAIRYFVEQGFELFVCQSFAKNFG-LYNERVGNLTVVVNNPAVIAGVKSQLT---------LVIR---SN-WS-NP 293 (410)
T ss_pred cccHHHHHHHHhcCCeEEEEhhhhhhcc-cccccccceEEEecChhHHHHHHHHHH---------HHHh---hc-cC-CC
Confidence 2221 133 366779999883 422 3 455556665555442210 0011 11 11 23
Q ss_pred cHHHHHHHHHHHH---HHHHh--ChHHHHHHHHHHHHHHHHHHHHcC----CccccCCCccCCCceEEEEcCCCCCHHHH
Q 017726 252 SIQLLYGLRAALD---LIFEE--GLENVIERHRRLGKATRLAVEAWG----LKNCTQKEEWFSDTVTAVIVPSHINSSEI 322 (367)
Q Consensus 252 ~~~~~~al~~al~---~~~~~--g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (367)
+..+.--....|. ..+++ .++.+..|+.+-+..|++.|.+++ +.-+.. ...++++ .|.++..
T Consensus 294 PAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~-----QiGMFSy---TGLtp~q- 364 (410)
T KOG1412|consen 294 PAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQ-----QIGMFSY---TGLTPAQ- 364 (410)
T ss_pred cchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHh-----hccceee---cCCCHHH-
Confidence 3322111221221 11222 267778888888888888888874 222221 2224444 3566544
Q ss_pred HHHHHhhCCeEEccCCCCCCCcEEEEeecC-CCCHHHHHHhhhh
Q 017726 323 VRRAWQRYNLSLGLGLNKVAGKVFRIGHLG-HLNEVMFNFQLLF 365 (367)
Q Consensus 323 ~~~L~~~~gv~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 365 (367)
+++|.++|.|++.+ .+ ||++.| .....|-..++|+
T Consensus 365 V~~li~~h~vyLl~------~G--RInisGLN~~NveyVAkAId 400 (410)
T KOG1412|consen 365 VDHLIENHKVYLLS------DG--RINISGLNMKNVEYVAKAID 400 (410)
T ss_pred HHHHHHhceEEEec------CC--cEeeeccccccHHHHHHHHH
Confidence 47788888888753 23 444445 3345566665554
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.17 E-value=6.7e-05 Score=64.80 Aligned_cols=242 Identities=17% Similarity=0.116 Sum_probs=136.7
Q ss_pred ecCChhHHHHHHHH--ccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhccCCCCccE
Q 017726 65 IPTTGTGAWESALT--NTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESD--WGEGAKLDVLASKLAADTAHTIKA 140 (367)
Q Consensus 65 ~~~ggt~al~~~~~--~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~e~l~~~i~~~~~~~~~l 140 (367)
-+-|||+|+..... +..-++..|.+++|.+ ++. ..+....|+.+.....- ....+|.+.+.+.+.+-+ +..-+
T Consensus 125 Q~lSGTGaLriga~Fl~~f~~~~~I~ip~PTW-gNh-~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p-~gs~i 201 (427)
T KOG1411|consen 125 QTLSGTGALRVGAEFLARFYPSRDIYIPDPTW-GNH-KNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP-EGSII 201 (427)
T ss_pred EeccCcchhhHHHHHHHhhccccceeecCCcc-ccc-CccccccCcceeeeeeccccccccchHHHHHHHhcCC-CCcEE
Confidence 34478888876443 3345788889898854 442 13345677777665543 345688888777777654 33334
Q ss_pred EEEEecCCCcccccc---HHHHHHHHHhcCCCcEEEEeeeeccCc-eeeccc--------cccce-EEEecCCCcccCCC
Q 017726 141 ICIVHNETATGVTNN---LSKVRKLLDEYRHPALFLVDGVSSICA-IDFRMD--------EWGID-VALTGSQKALSLPT 207 (367)
Q Consensus 141 v~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D~~~~~~~-~~~~~~--------~~~~d-~~~~s~~K~~~g~~ 207 (367)
++-.-.|||||+=.. .++|.++.++ .+.+-+.|.+|..++ -.++-+ +.+.+ ++.-|..|-| |..
T Consensus 202 lLhaCaHNPTGvDPt~eqw~ki~~~~~~--k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM-GLY 278 (427)
T KOG1411|consen 202 LLHACAHNPTGVDPTKEQWEKISDLIKE--KNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM-GLY 278 (427)
T ss_pred EeehhhcCCCCCCccHHHHHHHHHHhhh--ccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc-chh
Confidence 444457899996554 4556777777 889999998875332 222211 11233 5566888988 454
Q ss_pred c-----ceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHH---HHHHHh--ChHHHHHH
Q 017726 208 G-----MGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAAL---DLIFEE--GLENVIER 277 (367)
Q Consensus 208 g-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al---~~~~~~--g~~~~~~~ 277 (367)
| +.+++-+.+...++.... +.+-... ..+||+.+......-+ ++..+| .++.+..+
T Consensus 279 gERvGa~svvc~~ad~A~rV~SQl------------k~liRpm--YSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadR 344 (427)
T KOG1411|consen 279 GERVGALSVVCKDADEAKRVESQL------------KILIRPM--YSNPPLHGARIVATILSDPDLKNQWLGEVKGMADR 344 (427)
T ss_pred hhccceeEEEecCHHHHHHHHHHH------------HHHhccc--ccCCCccchhhhhhccCChHHHHHHHHHHHHHHHh
Confidence 3 356676777666554321 0000010 1123332111111111 111122 16677888
Q ss_pred HHHHHHHHHHHHHHcCCcc----ccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEc
Q 017726 278 HRRLGKATRLAVEAWGLKN----CTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLG 335 (367)
Q Consensus 278 ~~~~~~~l~~~L~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~ 335 (367)
+...+..|++.|++.|-.. +.. +- .+++|. ++++ +..+.|.+++-|++.
T Consensus 345 i~~mR~~L~d~L~~~gs~~~W~hI~~----QI-GMF~fT---gl~p-eQv~~l~ke~~iYmT 397 (427)
T KOG1411|consen 345 IISMRQQLFDALEKEGSPGNWSHITK----QI-GMFCFT---GLNP-EQVDWLTKEYHIYLT 397 (427)
T ss_pred hhhhHHHHhHHhhcCCCCccHHHHHH----hh-heeeec---CCCH-HHHHHHHhhheeeec
Confidence 8889999999998875322 222 22 245553 4555 455778888777664
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.89 E-value=0.0015 Score=56.92 Aligned_cols=207 Identities=16% Similarity=0.149 Sum_probs=114.6
Q ss_pred HHHHHHHHhccCC--CCccEEEEEecCCCccccc--c--HHHHHHHHHhcCCCcEEEEeeeeccCcee--------eccc
Q 017726 123 LDVLASKLAADTA--HTIKAICIVHNETATGVTN--N--LSKVRKLLDEYRHPALFLVDGVSSICAID--------FRMD 188 (367)
Q Consensus 123 ~e~l~~~i~~~~~--~~~~lv~~~~~~n~tG~~~--~--~~~i~~~~~~~~~~~~vi~D~~~~~~~~~--------~~~~ 188 (367)
++++|++|.+... ..+.++++...++--|.=. | +..+++++++ |++.+|+|+.+..+... .++.
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~K--h~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKK--HGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHh--cCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 5678888876421 1245666666666666433 2 7889999999 99999999998754321 1222
Q ss_pred cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCceeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHH
Q 017726 189 EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFE 268 (367)
Q Consensus 189 ~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~ 268 (367)
...|++++| |.|. .| |+ +-.+++... .+++ .| + .|.....-++-+...++.+.+
T Consensus 333 -~PpD~vTFS--KK~q--~g-Gf-fh~~~frpn-~pYr-------------if--N---TWmGdP~k~lll~~vv~~I~~ 386 (484)
T KOG1405|consen 333 -SPPDVVTFS--KKFQ--TG-GF-FHDEEFRPN-EPYR-------------IF--N---TWMGDPSKNLLLEEVVQEIKR 386 (484)
T ss_pred -CCccceehh--hhhh--cC-cc-ccCcccCCC-chHH-------------Hh--h---hhcCChHHHHHHHHHHHHHhH
Confidence 247888875 4452 11 32 222222110 0000 00 1 122223334566777777777
Q ss_pred hChHHHHHHHHHHHHHHHHHHHHc--CCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEccCCCCCCCcEE
Q 017726 269 EGLENVIERHRRLGKATRLAVEAW--GLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVF 346 (367)
Q Consensus 269 ~g~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~g~~~~~~~~i 346 (367)
++ +.+......+.|..+|.++ .++-....-- -.+.++.+++|++.--+.++..++ ..|+.+.. .+ ...+
T Consensus 387 ~~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~R-GrGTF~a~d~ps~~~Rdk~i~~~~-~nGv~~GG-Cg---~~si 457 (484)
T KOG1405|consen 387 ED---LLNNVAHVGKALLKGLLELQAKYPGKINNLR-GRGTFIAWDCPSGSIRDKLILIAR-LNGVNLGG-CG---DKSI 457 (484)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHhCchhhhccc-ccceEEEEeCCChHHHHHHHHHHH-HcCceecc-cc---ccee
Confidence 64 3446667778888887765 1111111111 145578888987655567777775 45887653 22 1235
Q ss_pred EEeecC--CCCHHHHHHhhhhc
Q 017726 347 RIGHLG--HLNEVMFNFQLLFQ 366 (367)
Q Consensus 347 Ri~~~~--~~~~~~~~~~~l~~ 366 (367)
|+-+.. ..-..+++.+++++
T Consensus 458 RfRPsLvf~~~Ha~i~l~~~~k 479 (484)
T KOG1405|consen 458 RFRPSLVFRKHHADIFLDIFDK 479 (484)
T ss_pred eeccceeehhhhHHHHHHHHHH
Confidence 654433 33345666666543
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.82 E-value=8.9e-05 Score=58.22 Aligned_cols=54 Identities=13% Similarity=0.076 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHhc--CC-CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcc
Q 017726 42 ALTKTLLEDIKKIFK--TT-SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQF 95 (367)
Q Consensus 42 ~~~~~~~~~la~~~~--~~-~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~ 95 (367)
...+.+.+.+.+.+| .+ .+++|++|+|+++++..++.++++|||.|+++.|.|.
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 344444444444545 32 3456999999999999999999999999999999664
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.67 E-value=0.032 Score=46.85 Aligned_cols=173 Identities=15% Similarity=0.201 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHhcCCC-CceEEecCChh-HHHHHHHHcc--CCCCCe-EEEEeCCcchHHHHHHHHHhCCceEEEeCC
Q 017726 42 ALTKTLLEDIKKIFKTTS-GTPFLIPTTGT-GAWESALTNT--LSPGDR-IISFLIGQFSLLWIDQQQRLNFNVDVVESD 116 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~-~~~v~~~~ggt-~al~~~~~~~--~~~gd~-vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 116 (367)
-+.+++...+-++.|+.. ..++++ +=+| -++.+++.++ ..|..+ |+-+.-..-+. + +..-..|++++.+.--
T Consensus 57 ~isne~a~~~i~l~glhav~nc~vv-pl~tgmslslc~~s~r~krpkakyiiw~ridqks~-~-ksi~~agfepiiie~i 133 (432)
T KOG3843|consen 57 CISNEFAKDAIHLAGLHAVANCFVV-PLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSC-F-KSIIHAGFEPIIIENI 133 (432)
T ss_pred HHHHHHHHHHHHHhhhhhhhceeEE-eccccccHHHHHHHHhhcCCcccEEEEEecchHHH-H-HHHHhcCCCceeeecc
Confidence 445666666777777752 233333 3333 4455555554 344444 33333322221 2 3334578888777532
Q ss_pred CCC---CCCHHHHHHHHhccCCCCccEEEEEecCCCccccc-----cHHHHHHHHHhcCCCcEEEEeeeeccCceee---
Q 017726 117 WGE---GAKLDVLASKLAADTAHTIKAICIVHNETATGVTN-----NLSKVRKLLDEYRHPALFLVDGVSSICAIDF--- 185 (367)
Q Consensus 117 ~~~---~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-----~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~--- 185 (367)
-++ .-|++.+++++++.+ +..|+..+ +.|.... .+++|..+|.. |+++-++..+|+......
T Consensus 134 ~d~d~l~tdleav~~~iee~g---~dcilci~--sttscfapr~pd~leaiaaica~--~diphivnnayglqsee~i~~ 206 (432)
T KOG3843|consen 134 LDGDELITDLEAVEAIIEELG---EDCILCIH--STTSCFAPRSPDNLEAIAAICAA--HDIPHIVNNAYGLQSEECIHK 206 (432)
T ss_pred ccchHHHHhHHHHHHHHHHhC---CceEEEEe--ecccccCCCCCchHHHHHHHHHc--cCchhhhccccccchHHHHHH
Confidence 222 348999999999754 34443332 2233332 38999999999 999999999988754321
Q ss_pred --ccccc-cceEEEecCCCcccCCCcceeee-eCHHHHHHhcc
Q 017726 186 --RMDEW-GIDVALTGSQKALSLPTGMGIVC-ASPKALEASKT 224 (367)
Q Consensus 186 --~~~~~-~~d~~~~s~~K~~~g~~g~g~~~-~~~~~~~~~~~ 224 (367)
...++ .+|.++-|..|.|.-|-|..++. .+..+++.+..
T Consensus 207 iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak 249 (432)
T KOG3843|consen 207 IAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAK 249 (432)
T ss_pred HHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHH
Confidence 01111 36888899999998887744333 57777777664
No 396
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=90.71 E-value=4 Score=37.96 Aligned_cols=191 Identities=13% Similarity=0.047 Sum_probs=105.0
Q ss_pred EEEEeCCcchHHHHHHHHHhCCceEEEeC----C---CCCCCCHHHHHHHHhccC-C-CCccEEEEEecCCCccccccHH
Q 017726 87 IISFLIGQFSLLWIDQQQRLNFNVDVVES----D---WGEGAKLDVLASKLAADT-A-HTIKAICIVHNETATGVTNNLS 157 (367)
Q Consensus 87 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~----~---~~~~~d~e~l~~~i~~~~-~-~~~~lv~~~~~~n~tG~~~~~~ 157 (367)
+++..+..+..+..-+++.+|+....+.. + .++++|.-.+++.|++.- + .+|-+++..-..+-.|...-+-
T Consensus 233 t~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~ 312 (838)
T KOG0630|consen 233 TFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMIL 312 (838)
T ss_pred eEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHH
Confidence 34444434444444567778876544321 1 135789889999988742 1 3344445555557788888899
Q ss_pred HHHHHHHhcCCC-cEEEEeeeeccCceee----ccc---cccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 158 KVRKLLDEYRHP-ALFLVDGVSSICAIDF----RMD---EWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 158 ~i~~~~~~~~~~-~~vi~D~~~~~~~~~~----~~~---~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
+|.++|++ ++ .|++.-+- +..++.+ ... ....|.+.....-|++ .+-.-++.....+...-.. .
T Consensus 313 kildi~ea--hakfWLHasGh-aiAALt~aepnnil~HV~eqldSMal~ialWLG-iPSaPiV~LHRPleg~aaS----a 384 (838)
T KOG0630|consen 313 KILDICEA--HAKFWLHASGH-AIAALTCAEPNNILGHVEEQLDSMALNIALWLG-IPSAPIVLLHRPLEGSAAS----A 384 (838)
T ss_pred HHHHHHHH--hhheeEeeccc-hhhheeecCcccchhHHHHHHhhccchhHHHhC-CCCCceEEeecccccccch----h
Confidence 99999999 65 78776532 2111111 100 1124566666667774 4444555554332110000 0
Q ss_pred eeechHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHc-CCccccC
Q 017726 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAW-GLKNCTQ 299 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 299 (367)
+-.| .-...++ +. ..++.++..+....+..++.....+.+.+.+.+.+. ++++++.
T Consensus 385 fesd-pi~rekL----------da---Lp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~ 441 (838)
T KOG0630|consen 385 FESD-PILREKL----------DA---LPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGH 441 (838)
T ss_pred cccC-hHHHHhh----------cc---chHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEecc
Confidence 0000 0000111 11 234566666666657777788888888888888775 6766653
No 397
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=87.32 E-value=4.9 Score=29.86 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=51.3
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
....++..|.++..++.+ .+.+++.+.+.+ .++++|.++.. .+.......++.+..|+...++.+++=+.+
T Consensus 20 la~~l~~~G~~v~~~d~~----~~~~~l~~~~~~---~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDAN----VPPEELVEALRA---ERPDVVGISVS--MTPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp HHHHHHHTTBEEEEEESS----B-HHHHHHHHHH---TTCSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred HHHHHHHCCCeEEEECCC----CCHHHHHHHHhc---CCCcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 456677789999888765 345888888776 46799988764 234445677788888775568898887766
Q ss_pred c
Q 017726 179 S 179 (367)
Q Consensus 179 ~ 179 (367)
.
T Consensus 91 ~ 91 (121)
T PF02310_consen 91 A 91 (121)
T ss_dssp S
T ss_pred h
Confidence 4
No 398
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=85.72 E-value=13 Score=33.61 Aligned_cols=126 Identities=13% Similarity=0.018 Sum_probs=69.1
Q ss_pred cHHHHHHHHHHHHHHHhcCCC--CceEEecCChhHHHHHHHHccCCCCCeE--EEEeCCcchH----HHHHHHHHhCCce
Q 017726 39 AVPALTKTLLEDIKKIFKTTS--GTPFLIPTTGTGAWESALTNTLSPGDRI--ISFLIGQFSL----LWIDQQQRLNFNV 110 (367)
Q Consensus 39 ~~~~~~~~~~~~la~~~~~~~--~~~v~~~~ggt~al~~~~~~~~~~gd~v--l~~~~~~~~~----~~~~~~~~~g~~~ 110 (367)
++.....++++.+.++-+... -++++..+||-.+..++......-|..+ ++.++++.+. .....++.+|+++
T Consensus 37 ~~~~~~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~ 116 (343)
T TIGR03573 37 DWDEREKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDL 116 (343)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCe
Confidence 345556667777766654433 4578888999877665422211123333 4555554432 1446677789998
Q ss_pred EEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeec
Q 017726 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (367)
Q Consensus 111 ~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~ 179 (367)
..+..+ .+.+.....+.. + -...|..+.. ......+.++|++ +|+.+|+.+.+.
T Consensus 117 ~~i~~d------~~~~~~l~~~~~----~--~~~~pc~~c~-~~~~~~l~~~A~~--~gi~~Il~G~~~ 170 (343)
T TIGR03573 117 HTITIN------PETFRKLQRAYF----K--KVGDPEWPQD-HAIFASVYQVALK--FNIPLIIWGENI 170 (343)
T ss_pred EEEeCC------HHHHHHHHHHHH----h--ccCCCchhhh-hHHHHHHHHHHHH--hCCCEEEeCCCH
Confidence 888764 344433332100 0 0111111111 1235678889999 999999887654
No 399
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=83.68 E-value=13 Score=34.09 Aligned_cols=95 Identities=9% Similarity=0.063 Sum_probs=59.9
Q ss_pred HHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCC--
Q 017726 72 AWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETA-- 149 (367)
Q Consensus 72 al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~-- 149 (367)
.+..+...+...+ +|++...+-....+.-.++++|+....+.+-.+ .++|++.+.+++ .+|+++++.+.++.
T Consensus 109 LLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE--t~~e~I~~~l~~---~~p~lvVIDSIQT~~s 182 (456)
T COG1066 109 LLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE--TNLEDIIAELEQ---EKPDLVVIDSIQTLYS 182 (456)
T ss_pred HHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh--cCHHHHHHHHHh---cCCCEEEEeccceeec
Confidence 3333344445555 777776654444455567888865443333222 378999998887 57899998877642
Q ss_pred -c-----ccccc----HHHHHHHHHhcCCCcEEEE
Q 017726 150 -T-----GVTNN----LSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 150 -t-----G~~~~----~~~i~~~~~~~~~~~~vi~ 174 (367)
. |.+.- -.++.++||+ .|+.++.
T Consensus 183 ~~~~SapGsVsQVRe~t~~L~~~AK~--~~i~~fi 215 (456)
T COG1066 183 EEITSAPGSVSQVREVAAELMRLAKT--KNIAIFI 215 (456)
T ss_pred ccccCCCCcHHHHHHHHHHHHHHHHH--cCCeEEE
Confidence 2 54432 3468889999 8887665
No 400
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=81.38 E-value=40 Score=30.19 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHhcC-------------CCCceEEecC-Ch---hHHHHHHHHccCCCCCeEEEEeCCcchHH----
Q 017726 40 VPALTKTLLEDIKKIFKT-------------TSGTPFLIPT-TG---TGAWESALTNTLSPGDRIISFLIGQFSLL---- 98 (367)
Q Consensus 40 ~~~~~~~~~~~la~~~~~-------------~~~~~v~~~~-gg---t~al~~~~~~~~~~gd~vl~~~~~~~~~~---- 98 (367)
.....+.+++.+.+++.- ..+..+++++ || |..+-.+..-+.+.|-+|++.....|-.-
T Consensus 106 ~~~v~~~l~~~l~~il~~~~~~~~~~~~~~~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQ 185 (340)
T COG0552 106 EETVKEALREALIEILRPVDKVDLPLEIPKEKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQ 185 (340)
T ss_pred HHHHHHHHHHHHHHHhcccccccchhhhccCCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHH
Confidence 344455566666666652 1234333332 33 45555555556678889998888666532
Q ss_pred HHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhccCCCCccEEEEEec---CCCccccccHHHHHHHHHhc----CCCc
Q 017726 99 WIDQQQRLNFNVDVVESDWG-EGAKLDVLASKLAADTAHTIKAICIVHN---ETATGVTNNLSKVRKLLDEY----RHPA 170 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-~~~d~e~l~~~i~~~~~~~~~lv~~~~~---~n~tG~~~~~~~i~~~~~~~----~~~~ 170 (367)
....+++.|++++.-+...| -.+-.+.++++..+ +.++|++.+. ||-...+..+++|.+++++. +|-+
T Consensus 186 L~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar----~~DvvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~ 261 (340)
T COG0552 186 LEVWGERLGVPVISGKEGADPAAVAFDAIQAAKAR----GIDVVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEI 261 (340)
T ss_pred HHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHc----CCCEEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceE
Confidence 23456778888776542211 12345778888774 5588888763 34455555688888888872 2447
Q ss_pred EEEEeeeec
Q 017726 171 LFLVDGVSS 179 (367)
Q Consensus 171 ~vi~D~~~~ 179 (367)
+++.|+..+
T Consensus 262 llvlDAttG 270 (340)
T COG0552 262 LLVLDATTG 270 (340)
T ss_pred EEEEEcccC
Confidence 888898754
No 401
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=81.13 E-value=18 Score=31.99 Aligned_cols=113 Identities=13% Similarity=0.123 Sum_probs=61.6
Q ss_pred EEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCC----------------------C
Q 017726 63 FLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE----------------------G 120 (367)
Q Consensus 63 v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~----------------------~ 120 (367)
+.+++||-+-+...+...+.-...++-.-.+..+..+....+..|++...++.+.+. .
T Consensus 31 ~~~~aGGKGINVa~vL~~lG~~~~a~GflGg~tg~~~~~~l~~~gi~~~fv~v~g~TRinvki~~~~~~~~Tein~~Gp~ 110 (310)
T COG1105 31 VTKTAGGKGINVARVLKDLGIPVTALGFLGGFTGEFFVALLKDEGIPDAFVEVKGDTRINVKILDEEDGEETEINFPGPE 110 (310)
T ss_pred ceecCCCCceeHHHHHHHcCCCceEEEecCCccHHHHHHHHHhcCCCceEEEccCCCeeeEEEEecCCCcEEEecCCCCC
Confidence 456666666555555444444334444444444333444455555555444432211 2
Q ss_pred CCHHHHHHHHhccC--CCCccEEEEEecCCCcccccc-HHHHHHHHHhcCCCcEEEEeeee
Q 017726 121 AKLDVLASKLAADT--AHTIKAICIVHNETATGVTNN-LSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 121 ~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~~-~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
++.+++++.++.-. .....+|+++ .+=|.|.-.+ ..+|.++|++ .|+.|++|...
T Consensus 111 is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g~~~d~y~~li~~~~~--~g~~vilD~Sg 168 (310)
T COG1105 111 ISEAELEQFLEQLKALLESDDIVVLS-GSLPPGVPPDAYAELIRILRQ--QGAKVILDTSG 168 (310)
T ss_pred CCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCCCCHHHHHHHHHHHHh--cCCeEEEECCh
Confidence 34444444433210 0233455544 5567776665 6789999999 99999999764
No 402
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=79.61 E-value=22 Score=26.26 Aligned_cols=70 Identities=16% Similarity=0.055 Sum_probs=45.2
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCC-CcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH-PALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~-~~~vi~D~~ 177 (367)
.....+..|.++..+.. ...++++.+.+.+ .++++|.++... +.......++.+.+++... ++.+++=+.
T Consensus 19 ~~~~l~~~G~~V~~lg~----~~~~~~l~~~~~~---~~pdvV~iS~~~--~~~~~~~~~~i~~l~~~~~~~~~i~vGG~ 89 (119)
T cd02067 19 VARALRDAGFEVIDLGV----DVPPEEIVEAAKE---EDADAIGLSGLL--TTHMTLMKEVIEELKEAGLDDIPVLVGGA 89 (119)
T ss_pred HHHHHHHCCCEEEECCC----CCCHHHHHHHHHH---cCCCEEEEeccc--cccHHHHHHHHHHHHHcCCCCCeEEEECC
Confidence 44667778988865542 2567888777776 467899887542 2234567778888877433 565555443
No 403
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=76.02 E-value=68 Score=29.85 Aligned_cols=131 Identities=12% Similarity=0.097 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHhcCCC-----CceE-EecCChh---HHHHHHHHccCCCCCeEEEEeCCcch--H--HHHHHHHHhC
Q 017726 41 PALTKTLLEDIKKIFKTTS-----GTPF-LIPTTGT---GAWESALTNTLSPGDRIISFLIGQFS--L--LWIDQQQRLN 107 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~-----~~~v-~~~~ggt---~al~~~~~~~~~~gd~vl~~~~~~~~--~--~~~~~~~~~g 107 (367)
......+.+.+...++.+. +..+ ++..+|+ ..+..+...+...|.+|.+.+.+.+- . .+...++..|
T Consensus 217 ~~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lg 296 (436)
T PRK11889 217 EEVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIG 296 (436)
T ss_pred HHHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcC
Confidence 3455566666666665431 1223 3333442 23332223344556566655554342 1 1444556677
Q ss_pred CceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHh-cCCCcEEEEeeee
Q 017726 108 FNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVS 178 (367)
Q Consensus 108 ~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~-~~~~~~vi~D~~~ 178 (367)
+++..+. +++++.+.+..... .+.++|++.++....-....+.++.++.+. .++.+++++|++.
T Consensus 297 ipv~v~~-------d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsATt 362 (436)
T PRK11889 297 FEVIAVR-------DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASM 362 (436)
T ss_pred CcEEecC-------CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCcc
Confidence 6665442 45666666643210 135788888765433223346666666655 3456777788753
No 404
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=75.40 E-value=32 Score=28.87 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=38.7
Q ss_pred HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 101 DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 101 ~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
...+..|++++..+.+ |.+.|.++++ ....|+++.+.+......-...+.+.|++ .|+..++
T Consensus 38 ~~l~~~g~~vv~~d~~-----~~~~l~~al~-----g~d~v~~~~~~~~~~~~~~~~~li~Aa~~--agVk~~v 99 (233)
T PF05368_consen 38 QQLQALGAEVVEADYD-----DPESLVAALK-----GVDAVFSVTPPSHPSELEQQKNLIDAAKA--AGVKHFV 99 (233)
T ss_dssp HHHHHTTTEEEES-TT------HHHHHHHHT-----TCSEEEEESSCSCCCHHHHHHHHHHHHHH--HT-SEEE
T ss_pred hhhhcccceEeecccC-----CHHHHHHHHc-----CCceEEeecCcchhhhhhhhhhHHHhhhc--cccceEE
Confidence 4455678887766554 7899999997 45667666654443333345678888888 6665443
No 405
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=72.97 E-value=40 Score=25.87 Aligned_cols=58 Identities=10% Similarity=-0.057 Sum_probs=40.5
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
....++..|.+++.+-.+ ..++++.+++.+ .++++|.++...+ .....+.++.+.+++
T Consensus 23 v~~~lr~~G~eVi~LG~~----vp~e~i~~~a~~---~~~d~V~lS~~~~--~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 23 LDRALTEAGFEVINLGVM----TSQEEFIDAAIE---TDADAILVSSLYG--HGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEcCccc--cCHHHHHHHHHHHHh
Confidence 456678889998877654 467888888876 4678998876543 233456677777776
No 406
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=72.62 E-value=41 Score=27.72 Aligned_cols=69 Identities=14% Similarity=0.126 Sum_probs=46.3
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCC--CcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRH--PALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~--~~~vi~D~ 176 (367)
.....+..|.++..+..+ +.++++.+.+.+ .++++|.++...+. ....+.++.+.+++... ++.|++=+
T Consensus 102 v~~~l~~~G~~vi~lG~~----~p~~~l~~~~~~---~~~d~v~lS~~~~~--~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 102 VATMLEANGFEVIDLGRD----VPPEEFVEAVKE---HKPDILGLSALMTT--TMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccccc--cHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 456678889988766533 568888888876 46789888764332 34567888888877333 55655543
No 407
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=72.18 E-value=32 Score=32.98 Aligned_cols=73 Identities=15% Similarity=0.111 Sum_probs=51.2
Q ss_pred HHHHHHhC-CceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeee
Q 017726 100 IDQQQRLN-FNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 100 ~~~~~~~g-~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
...++..| .++..++.. ...++.+++.+.+.+ .++++|.++.. |.......++.+.+|+..+++.||+=+.|
T Consensus 29 Aa~L~~~G~~~V~iiD~~-~~~~~~~~~~~~l~~---~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h 101 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAM-TGPLTDEKLVERLRA---HCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIH 101 (497)
T ss_pred HHHHHhcCCcceEEeccc-ccCCCHHHHHHHHHh---cCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 34456678 688888754 334677888888875 46799988642 44445567788888885569999987776
Q ss_pred c
Q 017726 179 S 179 (367)
Q Consensus 179 ~ 179 (367)
.
T Consensus 102 ~ 102 (497)
T TIGR02026 102 P 102 (497)
T ss_pred c
Confidence 4
No 408
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=72.11 E-value=31 Score=28.61 Aligned_cols=92 Identities=13% Similarity=0.037 Sum_probs=50.5
Q ss_pred eEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE
Q 017726 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (367)
Q Consensus 62 ~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv 141 (367)
.+++.+||..|...+ ..++..|-.|.+.+|. ++......++. | ++..+.-+ .+.+++ . ...+|
T Consensus 11 ~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~-~~~~l~~l~~~-~-~i~~~~~~----~~~~dl----~-----~~~lV 73 (205)
T TIGR01470 11 AVLVVGGGDVALRKA-RLLLKAGAQLRVIAEE-LESELTLLAEQ-G-GITWLARC----FDADIL----E-----GAFLV 73 (205)
T ss_pred eEEEECcCHHHHHHH-HHHHHCCCEEEEEcCC-CCHHHHHHHHc-C-CEEEEeCC----CCHHHh----C-----CcEEE
Confidence 477778888777654 4455667677777664 33323333332 2 44444322 122332 2 22455
Q ss_pred EEEecCCCccccccHHHHHHHHHhcCCCcEEE-Eeee
Q 017726 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFL-VDGV 177 (367)
Q Consensus 142 ~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi-~D~~ 177 (367)
+++ ||....-..+...|++ .++++- +|..
T Consensus 74 i~a-----t~d~~ln~~i~~~a~~--~~ilvn~~d~~ 103 (205)
T TIGR01470 74 IAA-----TDDEELNRRVAHAARA--RGVPVNVVDDP 103 (205)
T ss_pred EEC-----CCCHHHHHHHHHHHHH--cCCEEEECCCc
Confidence 544 3333334678999998 888874 4543
No 409
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=71.88 E-value=11 Score=36.51 Aligned_cols=311 Identities=13% Similarity=0.078 Sum_probs=155.7
Q ss_pred ccccCCCCCChHHHHHHHccCC------CCCCCC----cHHHHHHHHHHHHHHHhcCC-CCceEEecCChhHHHHHHHHc
Q 017726 11 HLFVPGPVHIPDQVIRAMNRNN------EDYRSP----AVPALTKTLLEDIKKIFKTT-SGTPFLIPTTGTGAWESALTN 79 (367)
Q Consensus 11 ~~~~~~p~~~~~~v~~a~~~~~------~~~~~~----~~~~~~~~~~~~la~~~~~~-~~~~v~~~~ggt~al~~~~~~ 79 (367)
|++.+|.+-..+.-.+...... +.|... ......+..|-++..+++.. .++.++++. .++|+...+.+
T Consensus 23 yldhag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae~ 101 (728)
T KOG2142|consen 23 YLDHAGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAEA 101 (728)
T ss_pred HHHhhhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHHh
Confidence 5556666655555555522211 112111 12355666677777788765 334578877 89999998887
Q ss_pred c--CCCCCeEEEEeCCcchHHHH---HH-HHHhCCceEEE-eCCCCC---CCCHHHHHHHHhccCCCCccEEEEEecCCC
Q 017726 80 T--LSPGDRIISFLIGQFSLLWI---DQ-QQRLNFNVDVV-ESDWGE---GAKLDVLASKLAADTAHTIKAICIVHNETA 149 (367)
Q Consensus 80 ~--~~~gd~vl~~~~~~~~~~~~---~~-~~~~g~~~~~v-~~~~~~---~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~ 149 (367)
+ ...+.++.-....++.+... .. ....|+.+.-+ ..+.-| ..++.+...-+. ...+.....-.|.
T Consensus 102 fp~~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~ls-----~~~L~~g~a~~nf 176 (728)
T KOG2142|consen 102 FPFYSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANLS-----EHSLFGGAAQSNF 176 (728)
T ss_pred CccccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccccccCcc-----cchhcccchhccc
Confidence 5 34454444333333332100 01 11123333333 111111 112222222121 2245555555566
Q ss_pred ccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcccCCCcceeeeeCHHHHHHhccCCCCc
Q 017726 150 TGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229 (367)
Q Consensus 150 tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~~g~~g~g~~~~~~~~~~~~~~~~~~~ 229 (367)
.|..+....+-.+ + .+.+=++++|.++-..+.+++.....+|++-. +.|.|.-+. |.+....+..+.... ....
T Consensus 177 eg~kik~ri~d~L-~-ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet--gAvlv~~r~A~~~Gg-kt~s 250 (728)
T KOG2142|consen 177 EGDKIKLRIMDRL-N-IPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET--GAVLVMNRSAELKGG-KTAS 250 (728)
T ss_pred ccceeeeeeeccc-c-cCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc--hhhHHHhhhhHhhcC-ccce
Confidence 6664221111111 1 12466788999988888888888888998888 888885444 444433343333322 2112
Q ss_pred eeec-------hHHHHHHhhcCCccCCCCcHHHHHHHHHHHHHHHHh-C-hHHHHHHHHHHHHHHHHHHHHc--CCcccc
Q 017726 230 VFFD-------WKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEE-G-LENVIERHRRLGKATRLAVEAW--GLKNCT 298 (367)
Q Consensus 230 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~al~~al~~~~~~-g-~~~~~~~~~~~~~~l~~~L~~~--g~~~~~ 298 (367)
.++. ..++.++++.|+ .+...++.+...+...... | +..+......+++++.-.|.+. |-+.+.
T Consensus 251 a~f~wp~~~l~s~~lkkr~e~gk-----~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd 325 (728)
T KOG2142|consen 251 AEFSWPMLYLLSEKLKKRFEDGK-----LRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMD 325 (728)
T ss_pred eecccchHHHHHHHHHHHHhhcc-----ccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHh
Confidence 2222 234557777775 4443334555555555543 3 5556666677777777777664 533322
Q ss_pred C------CCccCCCceEEEEcCCC-CC--HHHHHHHHHhhCCeEEccCCCC
Q 017726 299 Q------KEEWFSDTVTAVIVPSH-IN--SSEIVRRAWQRYNLSLGLGLNK 340 (367)
Q Consensus 299 ~------~~~~~~~~~~~~~~~~~-~~--~~~l~~~L~~~~gv~v~~g~~~ 340 (367)
. .++ ..+..+.+.+..+ -+ .--+++... -+++..++|...
T Consensus 326 ~yglS~f~Pd-fqg~sf~fv~g~d~psgfGcl~VkKs~-i~~l~lrtGcfc 374 (728)
T KOG2142|consen 326 SYGLSLFQPD-FQGPSFYFVFGRDDPSGFGCLEVKKSA-ISGLELRTGCFC 374 (728)
T ss_pred hhhhhccCcc-ceeeeEEEEeccCCCCceeeeeeehhh-hhceeccCCCCC
Confidence 1 123 3334555555322 01 011223332 457777777553
No 410
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=69.57 E-value=51 Score=27.55 Aligned_cols=68 Identities=7% Similarity=-0.007 Sum_probs=46.6
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
.....+..|.+++.+-.+ +.++++.+.+.+ .++++|.++...+ .....++++.+.+++...++.|++=
T Consensus 108 v~~~l~~~G~~Vi~LG~~----vp~e~~v~~~~~---~~~~~V~lS~~~~--~~~~~~~~~i~~L~~~~~~~~i~vG 175 (213)
T cd02069 108 VGVILSNNGYEVIDLGVM----VPIEKILEAAKE---HKADIIGLSGLLV--PSLDEMVEVAEEMNRRGIKIPLLIG 175 (213)
T ss_pred HHHHHHhCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEccchh--ccHHHHHHHHHHHHhcCCCCeEEEE
Confidence 446678889998877654 568898888887 4778998876533 2345677777777773335555554
No 411
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=68.65 E-value=48 Score=25.13 Aligned_cols=68 Identities=15% Similarity=0.032 Sum_probs=44.9
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcC-CCcEEEEe
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR-HPALFLVD 175 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~-~~~~vi~D 175 (367)
.....+..|++++.+..+ ..+|.+.++..+ +++++|.++... +.+...++++.+.+++.. .++.+++=
T Consensus 19 v~~~L~~~GfeVidLG~~----v~~e~~v~aa~~---~~adiVglS~L~--t~~~~~~~~~~~~l~~~gl~~v~vivG 87 (128)
T cd02072 19 LDHAFTEAGFNVVNLGVL----SPQEEFIDAAIE---TDADAILVSSLY--GHGEIDCKGLREKCDEAGLKDILLYVG 87 (128)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccc--cCCHHHHHHHHHHHHHCCCCCCeEEEE
Confidence 445677889998877654 457777776665 467899887653 334456788888888822 13444443
No 412
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=68.04 E-value=12 Score=29.67 Aligned_cols=51 Identities=20% Similarity=0.243 Sum_probs=40.3
Q ss_pred CHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 122 d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
|..+++++++. ..+.+++- +|.+.+++++.+.+++....+++++|-..++.
T Consensus 12 ~~~~le~~les----~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALES----ESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcC----CCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 56788888884 45777665 58899999999999996667788899887764
No 413
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=65.56 E-value=98 Score=27.43 Aligned_cols=74 Identities=11% Similarity=0.133 Sum_probs=49.7
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHH----HHHHHHhccCCCCccE-EEEEecCCCccccccHHHHHHHHHhcCCCcEEE
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLD----VLASKLAADTAHTIKA-ICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e----~l~~~i~~~~~~~~~l-v~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi 173 (367)
+.+.++..|+.-.-+-.+.-++.+.+ ++.+..+. +.+ +++-+..+.||.-++.+.+.++++. .|+.-+
T Consensus 91 lak~a~~~Gad~il~v~PyY~k~~~~gl~~hf~~ia~a-----~~lPvilYN~P~~tg~~l~~e~i~~la~~--~nivgi 163 (299)
T COG0329 91 LAKHAEKLGADGILVVPPYYNKPSQEGLYAHFKAIAEA-----VDLPVILYNIPSRTGVDLSPETIARLAEH--PNIVGV 163 (299)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCChHHHHHHHHHHHHh-----cCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEE
Confidence 55677888987666655555555543 44444432 233 5555666899999999999999985 788877
Q ss_pred Eeeeec
Q 017726 174 VDGVSS 179 (367)
Q Consensus 174 ~D~~~~ 179 (367)
=|.+..
T Consensus 164 Kd~~gd 169 (299)
T COG0329 164 KDSSGD 169 (299)
T ss_pred EeCCcC
Confidence 776643
No 414
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=64.47 E-value=79 Score=25.98 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=46.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc--CCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY--RHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~--~~~~~vi~D~ 176 (367)
.....+..|.+++.+-.+ +.++++.+.+.+ .++++|.++...+++ ...+.++.+.+++. +.++.+++=+
T Consensus 104 v~~~l~~~G~~vi~LG~~----vp~e~~v~~~~~---~~pd~v~lS~~~~~~--~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 104 VVTMLRANGFDVIDLGRD----VPIDTVVEKVKK---EKPLMLTGSALMTTT--MYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred HHHHHHhCCcEEEECCCC----CCHHHHHHHHHH---cCCCEEEEccccccC--HHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 456678889988877544 568888888887 467899887643333 44577777777773 2245666543
No 415
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=64.42 E-value=22 Score=32.53 Aligned_cols=63 Identities=21% Similarity=0.190 Sum_probs=43.1
Q ss_pred ceEEEeCCCCCC-CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 109 NVDVVESDWGEG-AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 109 ~~~~v~~~~~~~-~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
.+..++.++... .+.+.+.+.+++.- +..++++++- +--|.+.+.+.+.++|++ .|++|++|-
T Consensus 115 QllRvD~Ee~~~~~~~~~ll~~~~~~l-~~~~~vVLSD--Y~KG~L~~~q~~I~~ar~--~~~pVLvDP 178 (467)
T COG2870 115 QLLRLDFEEKFPIEDENKLLEKIKNAL-KSFDALVLSD--YAKGVLTNVQKMIDLARE--AGIPVLVDP 178 (467)
T ss_pred eEEEecccccCcchhHHHHHHHHHHHh-hcCCEEEEec--cccccchhHHHHHHHHHH--cCCcEEECC
Confidence 345565554332 23445555554422 3557787764 568899999999999999 999999993
No 416
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=63.57 E-value=65 Score=24.66 Aligned_cols=58 Identities=14% Similarity=0.006 Sum_probs=41.9
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
....++..|++++.+..+ ..+|++.++..+ +++.+|.+++-. +.....++++.+.+++
T Consensus 21 v~~~l~~~GfeVi~LG~~----v~~e~~v~aa~~---~~adiVglS~l~--~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 21 LDHAFTNAGFNVVNLGVL----SPQEEFIKAAIE---TKADAILVSSLY--GHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHH---cCCCEEEEeccc--ccCHHHHHHHHHHHHH
Confidence 456778889998877654 467877777665 467899888754 3344468888888888
No 417
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=63.04 E-value=47 Score=25.61 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=48.3
Q ss_pred HHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCcc-EEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeec
Q 017726 104 QRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIK-AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (367)
Q Consensus 104 ~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~-lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~ 179 (367)
+..|.++..+...+-|. -+++-+.|.+. +.+ +|++.-|-++...-.|++.+.++|.- ||+++-...+.+
T Consensus 45 ~~tgL~V~~~~SGplGG--DqQIga~Ia~g---~id~vIFf~DPl~~~phepDi~aLlRlc~v--~nIP~AtN~aTA 114 (143)
T TIGR00160 45 RATGLNINAMLSGPMGG--DQQIGALIAEG---KIDAVIFFWDPLNAQPHEPDVKALLRLCTV--WNIPLATNVATA 114 (143)
T ss_pred HHHCCCeEEeccCCccH--HHHHHHHHHhC---CCCEEEEecCCCCCCCCCcCHHHHHHHHHh--hCcccccCHHHH
Confidence 33566666655444332 24566666652 344 56888898999999999999999999 999988775543
No 418
>TIGR00322 diphth2_R diphthamide biosynthesis protein 2-related domain. Because archaeal species are known to have the diphthamide modification to the conserved His of archaeal and eukaryotic EF-2, it may be that the lone homolog of YKL191W in M. jannaschii, A. fulgidus, and M. thermoautotrophicum is orthologous. However, each of these is considerably shorter than YKL191W and seems more closely related to the uncharacterized protein YIL103W than to YKL191W.
Probab=63.03 E-value=23 Score=31.96 Aligned_cols=79 Identities=11% Similarity=0.228 Sum_probs=58.5
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh-cCCCcEEEEeeeeccCcee-eccccccceEEEe
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICAID-FRMDEWGIDVALT 197 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~-~~~~~~vi~D~~~~~~~~~-~~~~~~~~d~~~~ 197 (367)
.++.+...+.|++. +.+-|.+. -|-|....-.++.+..++ ....++|.-|-+|+....+ ......++|+++.
T Consensus 4 ~~e~~~~i~~I~~~---~~krV~LQ---fPdgLl~~a~~ia~~l~~~~~~~v~IlaD~~YGaCcvdd~~a~~~~aD~iVH 77 (332)
T TIGR00322 4 NLETEKVIGNIRKY---NAKRVGLQ---MPEGLKIRALEIAEIIEQFCGVETVISGDTSFGACDIDDFTARALDVDLIVH 77 (332)
T ss_pred cccHHHHHHHHHHc---CCCEEEEE---CCHHHHHHHHHHHHHHHhccCceEEEEcCCceecCCCCHHHHhhcCCCEEEE
Confidence 45677877777764 34556554 578988888888888876 3467888889999988763 2334458999999
Q ss_pred cCCCccc
Q 017726 198 GSQKALS 204 (367)
Q Consensus 198 s~~K~~~ 204 (367)
-+|.++.
T Consensus 78 yGHscl~ 84 (332)
T TIGR00322 78 YAHTPLV 84 (332)
T ss_pred cCCCCCC
Confidence 9999986
No 419
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=62.41 E-value=84 Score=25.70 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=31.0
Q ss_pred CHHHHHHHHhccCCCCccEEEEEecCCCccccc-cHHHHHHHHHh
Q 017726 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTN-NLSKVRKLLDE 165 (367)
Q Consensus 122 d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~-~~~~i~~~~~~ 165 (367)
|++...++.+..+.-++..|+-...+|+||... |-..+.++|..
T Consensus 121 dp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 566555555544423456676668889999665 88899999987
No 420
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=61.08 E-value=1e+02 Score=26.03 Aligned_cols=91 Identities=16% Similarity=0.184 Sum_probs=50.7
Q ss_pred eEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE
Q 017726 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (367)
Q Consensus 62 ~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv 141 (367)
.+++++||..|...+- .++..|-.|.+..|.... .....+.... +..+.-+ ++.++++ ...+|
T Consensus 27 ~VLVVGGG~VA~RK~~-~Ll~~gA~VtVVap~i~~-el~~l~~~~~--i~~~~r~----~~~~dl~---------g~~LV 89 (223)
T PRK05562 27 KVLIIGGGKAAFIKGK-TFLKKGCYVYILSKKFSK-EFLDLKKYGN--LKLIKGN----YDKEFIK---------DKHLI 89 (223)
T ss_pred EEEEECCCHHHHHHHH-HHHhCCCEEEEEcCCCCH-HHHHHHhCCC--EEEEeCC----CChHHhC---------CCcEE
Confidence 4788899998877643 455667777777775433 2323333222 3333322 2344431 23566
Q ss_pred EEEecCCCccccccHHHHHHHHHhcCCCcEEE-Eee
Q 017726 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFL-VDG 176 (367)
Q Consensus 142 ~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi-~D~ 176 (367)
+.++. ...=-+.|.+.|++ .++++. +|.
T Consensus 90 iaATd-----D~~vN~~I~~~a~~--~~~lvn~vd~ 118 (223)
T PRK05562 90 VIATD-----DEKLNNKIRKHCDR--LYKLYIDCSD 118 (223)
T ss_pred EECCC-----CHHHHHHHHHHHHH--cCCeEEEcCC
Confidence 65542 11224568899988 777655 454
No 421
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=60.56 E-value=1.3e+02 Score=27.13 Aligned_cols=148 Identities=11% Similarity=0.038 Sum_probs=68.7
Q ss_pred hHHHHHHHccCCCC---CCCCcHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCC--CCCeEEEEeCCcc
Q 017726 21 PDQVIRAMNRNNED---YRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLS--PGDRIISFLIGQF 95 (367)
Q Consensus 21 ~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~--~gd~vl~~~~~~~ 95 (367)
..++..++.+...- |+.+...+..+.+++.-. +....+.+..|..+.-.--+..++. ++-.+|+.+..|.
T Consensus 58 ~~~mA~~la~~g~~~~iHk~~~~e~~~~~v~~~~~-----~~~~~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhG 132 (343)
T TIGR01305 58 TFEMAAALSQHSIFTAIHKHYSVDEWKAFATNSSP-----DCLQNVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANG 132 (343)
T ss_pred CHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHhhcc-----cccceEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 45566666664321 555554444444332111 1111234433333333223333333 3455666666554
Q ss_pred hHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEE-------ecCCCcccccc-HHHHHHHHHh-
Q 017726 96 SLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIV-------HNETATGVTNN-LSKVRKLLDE- 165 (367)
Q Consensus 96 ~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~-------~~~n~tG~~~~-~~~i~~~~~~- 165 (367)
... .....+...-.....++=..+-.++|..+.+++. ..+.|.+. ...-.+|.-.| +..+.++++.
T Consensus 133 hs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~a----GAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa 208 (343)
T TIGR01305 133 YSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILS----GADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAA 208 (343)
T ss_pred cHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHc----CCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHh
Confidence 332 2222222211111111112334688999988874 44666543 22233444433 5555555554
Q ss_pred cCCCcEEEEeee
Q 017726 166 YRHPALFLVDGV 177 (367)
Q Consensus 166 ~~~~~~vi~D~~ 177 (367)
..+++.|+.|.-
T Consensus 209 ~~~~v~VIaDGG 220 (343)
T TIGR01305 209 HGLKGHIISDGG 220 (343)
T ss_pred ccCCCeEEEcCC
Confidence 226899999964
No 422
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=59.97 E-value=61 Score=23.79 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=37.8
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
+|++.+-+-...+....++.+|++.+.+..+++. ........ -+++++. +..+.-...+.+.|.+++++
T Consensus 4 kvLIanrGeia~r~~ra~r~~Gi~tv~v~s~~d~----~s~~~~~a------d~~~~~~-~~~~~~~yl~~e~I~~ia~~ 72 (110)
T PF00289_consen 4 KVLIANRGEIAVRIIRALRELGIETVAVNSNPDT----VSTHVDMA------DEAYFEP-PGPSPESYLNIEAIIDIARK 72 (110)
T ss_dssp EEEESS-HHHHHHHHHHHHHTTSEEEEEEEGGGT----TGHHHHHS------SEEEEEE-SSSGGGTTTSHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcceeccCchhc----cccccccc------ccceecC-cchhhhhhccHHHHhhHhhh
Confidence 4566655555555556677778887777765432 11111111 1344443 44444455678888888887
No 423
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=59.83 E-value=1.1e+02 Score=28.26 Aligned_cols=88 Identities=9% Similarity=0.074 Sum_probs=49.1
Q ss_pred cCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc--------c
Q 017726 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--------G 151 (367)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t--------G 151 (367)
....|.+|++...+.........+++.|.....+..-. ..+++.+.+.+.+ .++++|++.+.++.. |
T Consensus 106 ~a~~g~~VlYvs~EEs~~qi~~Ra~rlg~~~~~l~l~~--e~~le~I~~~i~~---~~~~lVVIDSIq~l~~~~~~~~~g 180 (372)
T cd01121 106 LAKRGGKVLYVSGEESPEQIKLRADRLGISTENLYLLA--ETNLEDILASIEE---LKPDLVIIDSIQTVYSSELTSAPG 180 (372)
T ss_pred HHhcCCeEEEEECCcCHHHHHHHHHHcCCCcccEEEEc--cCcHHHHHHHHHh---cCCcEEEEcchHHhhccccccCCC
Confidence 34455677766554322223333555665433332211 1367888888865 467999998876532 2
Q ss_pred cccc----HHHHHHHHHhcCCCcEEEE
Q 017726 152 VTNN----LSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 152 ~~~~----~~~i~~~~~~~~~~~~vi~ 174 (367)
.... +..+.+++++ +++.++.
T Consensus 181 ~~~qvr~~~~~L~~lak~--~~itvil 205 (372)
T cd01121 181 SVSQVRECTAELMRFAKE--RNIPIFI 205 (372)
T ss_pred CHHHHHHHHHHHHHHHHH--cCCeEEE
Confidence 1211 3457788888 7776543
No 424
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=59.53 E-value=46 Score=29.41 Aligned_cols=92 Identities=14% Similarity=0.078 Sum_probs=54.9
Q ss_pred CCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCC-CHHHHHHHHhccCC
Q 017726 57 TTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGA-KLDVLASKLAADTA 135 (367)
Q Consensus 57 ~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~-d~e~l~~~i~~~~~ 135 (367)
+.+...|+=.+||..++-+++.+-. .|=++++.-|+..|..-..+.+.+|++++.+|....+.. -.+.+++...++
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~-- 135 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEI-- 135 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhC--
Confidence 3455568888888888877665533 344555555667776555778899999999987433211 233444444433
Q ss_pred CCcc-EEEE---EecCCCcccc
Q 017726 136 HTIK-AICI---VHNETATGVT 153 (367)
Q Consensus 136 ~~~~-lv~~---~~~~n~tG~~ 153 (367)
+. .+++ .+|.||-...
T Consensus 136 --p~~~~~~~Qf~NpaN~~aH~ 155 (300)
T COG0031 136 --PGYAVWLNQFENPANPEAHY 155 (300)
T ss_pred --CCceEchhhcCCCccHHHHH
Confidence 23 5554 3555544433
No 425
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=58.80 E-value=61 Score=24.81 Aligned_cols=57 Identities=19% Similarity=0.244 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH-HHHHHHHh--cCC-CcEEE-Eeeeec
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS-KVRKLLDE--YRH-PALFL-VDGVSS 179 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~-~i~~~~~~--~~~-~~~vi-~D~~~~ 179 (367)
..+.+.|.+.+++ .++..+++-.|-+..|..-+.. .+.+++++ ... ++.|+ +||.++
T Consensus 37 ~~~~~~l~~li~~---~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 37 EKDIEELKKLIEE---YQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCHHHHHHHHHH---CCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred chHHHHHHHHHHH---hCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 4589999999998 4688999999999999887632 23333332 012 77655 898765
No 426
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=58.38 E-value=1.2e+02 Score=26.46 Aligned_cols=76 Identities=12% Similarity=0.109 Sum_probs=44.5
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+.++..|+.-+.+-.+.....+.+++.+..++-.. ...-+++...| ..+|..++.+.+.++++. .++.-+=|..
T Consensus 87 ~a~~a~~~G~d~v~~~~P~~~~~~~~~l~~~~~~ia~~~~~pi~lYn~P-~~~g~~ls~~~~~~L~~~--p~v~giK~s~ 163 (284)
T cd00950 87 LTKRAEKAGADAALVVTPYYNKPSQEGLYAHFKAIAEATDLPVILYNVP-GRTGVNIEPETVLRLAEH--PNIVGIKEAT 163 (284)
T ss_pred HHHHHHHcCCCEEEEcccccCCCCHHHHHHHHHHHHhcCCCCEEEEECh-hHhCCCCCHHHHHHHhcC--CCEEEEEECC
Confidence 4566777888866665444444455554444333110 12233433333 347999999999999976 6777666644
No 427
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=57.19 E-value=85 Score=23.92 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=38.3
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
.....+..|++++..... .+++++.++..+ .++++|.+|+-. +.+..-++++.+.+++
T Consensus 22 v~~~l~~~GfeVi~lg~~----~s~e~~v~aa~e---~~adii~iSsl~--~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 22 IATAYADLGFDVDVGPLF----QTPEEIARQAVE---ADVHVVGVSSLA--GGHLTLVPALRKELDK 79 (132)
T ss_pred HHHHHHhCCcEEEECCCC----CCHHHHHHHHHH---cCCCEEEEcCch--hhhHHHHHHHHHHHHh
Confidence 345667788888866543 356666555544 467899988753 3444557888887777
No 428
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=56.53 E-value=1.4e+02 Score=27.95 Aligned_cols=96 Identities=22% Similarity=0.104 Sum_probs=55.7
Q ss_pred ceEEecCChhHHHHHHHHcc---------CCCCCeEEEEeCCcchHH---H---HH-HHHHhCCceEEEeCCCCCCCCHH
Q 017726 61 TPFLIPTTGTGAWESALTNT---------LSPGDRIISFLIGQFSLL---W---ID-QQQRLNFNVDVVESDWGEGAKLD 124 (367)
Q Consensus 61 ~~v~~~~ggt~al~~~~~~~---------~~~gd~vl~~~~~~~~~~---~---~~-~~~~~g~~~~~v~~~~~~~~d~e 124 (367)
..+++++|+.+.....+..+ +.++|.|+.+.++.++.. . .. .....|+++.. .....+..+-+
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~h~SgHa~~~ 365 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK-RIHVSGHASQE 365 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe-ceEecCCCCHH
Confidence 44666666553333333222 247888998887666543 1 11 23346666543 12234556788
Q ss_pred HHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 125 VLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 125 ~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
++...++. -+|+.++-+| |-.-.+....+++++
T Consensus 366 dl~~~i~~---~~Pk~~ipvH-----ge~~~~~~~~~~a~~ 398 (422)
T TIGR00649 366 DHKLLLRL---LKPKYIIPVH-----GEYRMLINHTKLAEE 398 (422)
T ss_pred HHHHHHHH---hCCCEEEecC-----CcHHHHHHHHHHHHH
Confidence 88888775 3578887776 444456667777776
No 429
>TIGR00272 DPH2 diphthamide biosynthesis protein 2. This protein has been shown in Saccharomyces cerevisiae to be one of several required for the modification of a particular histidine residue of translation elongation factor 2 to diphthamide. This modified site can then become the target for ADP-ribosylation by diphtheria toxin.
Probab=55.86 E-value=43 Score=32.08 Aligned_cols=78 Identities=15% Similarity=0.210 Sum_probs=57.6
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc----CCCcEEEEeeeeccCcee-eccccccceEE
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY----RHPALFLVDGVSSICAID-FRMDEWGIDVA 195 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~----~~~~~vi~D~~~~~~~~~-~~~~~~~~d~~ 195 (367)
.+++.+.+.|+++. .+=|.+ +-|-|...+-..|.++.++. ...++|+-|-+|+.++.+ +.....++|++
T Consensus 37 yei~~~~~~I~~~~---~krVaL---QFPDgLL~~a~~va~~L~~~~~~~~~~v~IlaDtsYGaCCVDevaA~hv~aD~i 110 (496)
T TIGR00272 37 YEIEPTVGYIKQGN---EYQVAL---QFPDDLLKDSSKVVRLLQSKFPHGKIKFWVLADTAYSSCCVDEVAAEHVHAEAV 110 (496)
T ss_pred hhHHHHHHHHHHCC---CCEEEE---ECChHHHHHHHHHHHHHHhhcccCCceEEEEeCCcccccccCHHHHhhcCCCEE
Confidence 46677777787643 333554 45789998888888888662 367889999999988873 33344589999
Q ss_pred EecCCCccc
Q 017726 196 LTGSQKALS 204 (367)
Q Consensus 196 ~~s~~K~~~ 204 (367)
+.-+|-++.
T Consensus 111 VHyGhsCLs 119 (496)
T TIGR00272 111 VHFGDACLS 119 (496)
T ss_pred EEeCCCCCC
Confidence 999999986
No 430
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=54.12 E-value=33 Score=29.68 Aligned_cols=77 Identities=14% Similarity=0.133 Sum_probs=50.1
Q ss_pred CHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE-eeeeccCceeeccccccceEEEecCC
Q 017726 122 KLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV-DGVSSICAIDFRMDEWGIDVALTGSQ 200 (367)
Q Consensus 122 d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~-D~~~~~~~~~~~~~~~~~d~~~~s~~ 200 (367)
|.+.+.+++.+.+ +...+.++ .++|-|.+..-.+|.++.+++...+.+++ +.|.++|++ -..++|-++.+.+
T Consensus 76 dse~v~raI~~~~-~~~~IdLi--i~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTl----IALaADeIvM~p~ 148 (285)
T PF01972_consen 76 DSEFVLRAIREAP-KDKPIDLI--IHTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTL----IALAADEIVMGPG 148 (285)
T ss_pred hHHHHHHHHHhcC-CCCceEEE--EECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHH----HHHhCCeEEECCC
Confidence 5566777776543 22223333 36889999999999999998544555555 566666553 2335787888777
Q ss_pred CcccCC
Q 017726 201 KALSLP 206 (367)
Q Consensus 201 K~~~g~ 206 (367)
-.+ ||
T Consensus 149 a~L-Gp 153 (285)
T PF01972_consen 149 AVL-GP 153 (285)
T ss_pred Ccc-CC
Confidence 777 45
No 431
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=54.11 E-value=59 Score=29.12 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=55.0
Q ss_pred CHHHHHHHHhcc-CCCCccEEEEEecCCCccccccHHHHHHHHHhcC--CCcEEEEeeeeccCceeeccccccceEEEec
Q 017726 122 KLDVLASKLAAD-TAHTIKAICIVHNETATGVTNNLSKVRKLLDEYR--HPALFLVDGVSSICAIDFRMDEWGIDVALTG 198 (367)
Q Consensus 122 d~e~l~~~i~~~-~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~--~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s 198 (367)
+.+.+++.++.- ..++.|.|++- .|+|-|.+..-..|.+..++.+ .-+++.++...+.|..-+ .+.+|=++.+
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AASGGY~I---A~aAd~I~a~ 156 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAASGGYYI---ALAADKIVAD 156 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeecchhhhh---hccCCEEEec
Confidence 455555554441 11456777554 5688999987666655555521 236666664433333222 2356777777
Q ss_pred CCCcccCCCcceeeeeCHHHHHHhcc
Q 017726 199 SQKALSLPTGMGIVCASPKALEASKT 224 (367)
Q Consensus 199 ~~K~~~g~~g~g~~~~~~~~~~~~~~ 224 (367)
++-..+ + +|++...+++.+-+..
T Consensus 157 p~si~G-S--IGVi~~~~~~~~l~~k 179 (317)
T COG0616 157 PSSITG-S--IGVISGAPNFEELLEK 179 (317)
T ss_pred CCceee-e--ceeEEecCCHHHHHHh
Confidence 766552 3 4788877777555544
No 432
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=53.07 E-value=1.7e+02 Score=26.10 Aligned_cols=76 Identities=11% Similarity=-0.082 Sum_probs=45.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCc-c-EEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTI-K-AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~-~-lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
+.+.++..|+.-.-+-.+.....+.+.+.+..++-. +.+ . -|++-+....||.-++.+-+.++++- .++.-|=|.
T Consensus 95 ~a~~A~~~Gad~vlv~~P~y~~~~~~~l~~yf~~va-~a~~~lPv~iYn~P~~tg~~l~~~~l~~L~~~--pnivgiKds 171 (309)
T cd00952 95 RTRALLDLGADGTMLGRPMWLPLDVDTAVQFYRDVA-EAVPEMAIAIYANPEAFKFDFPRAAWAELAQI--PQVVAAKYL 171 (309)
T ss_pred HHHHHHHhCCCEEEECCCcCCCCCHHHHHHHHHHHH-HhCCCCcEEEEcCchhcCCCCCHHHHHHHhcC--CCEEEEEec
Confidence 456677788886666555444555555444433211 112 1 23333333568888999999999854 677777775
Q ss_pred e
Q 017726 177 V 177 (367)
Q Consensus 177 ~ 177 (367)
.
T Consensus 172 s 172 (309)
T cd00952 172 G 172 (309)
T ss_pred C
Confidence 5
No 433
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=53.06 E-value=14 Score=36.10 Aligned_cols=39 Identities=8% Similarity=0.046 Sum_probs=32.8
Q ss_pred EEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeecc
Q 017726 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180 (367)
Q Consensus 140 lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~ 180 (367)
.+..=.|++..|...+++++++.||+ .||-||+|-+++.
T Consensus 200 ~~g~yAp~sryGtPedfk~fVD~aH~--~GIgViLD~V~~H 238 (628)
T COG0296 200 GTGYYAPTSRYGTPEDFKALVDAAHQ--AGIGVILDWVPNH 238 (628)
T ss_pred cceeccccccCCCHHHHHHHHHHHHH--cCCEEEEEecCCc
Confidence 34455677888999999999999999 9999999987654
No 434
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=51.21 E-value=1.5e+02 Score=26.02 Aligned_cols=76 Identities=11% Similarity=0.067 Sum_probs=46.2
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCc--cEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTI--KAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~--~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
..+.++..|+.-..+-.+..+..+.+++.+..++-. +.+ .-|++-+....+|.-++.+.+.++++. .++.-+=|.
T Consensus 88 ~a~~a~~~Gad~v~~~~P~y~~~~~~~i~~~~~~v~-~a~~~lpi~iYn~P~~tg~~l~~~~~~~L~~~--pnivgiK~s 164 (288)
T cd00954 88 LAKHAEELGYDAISAITPFYYKFSFEEIKDYYREII-AAAASLPMIIYHIPALTGVNLTLEQFLELFEI--PNVIGVKFT 164 (288)
T ss_pred HHHHHHHcCCCEEEEeCCCCCCCCHHHHHHHHHHHH-HhcCCCCEEEEeCccccCCCCCHHHHHHHhcC--CCEEEEEeC
Confidence 456677788887766545444555555544433311 111 123333333468999999999999975 788877776
Q ss_pred e
Q 017726 177 V 177 (367)
Q Consensus 177 ~ 177 (367)
+
T Consensus 165 ~ 165 (288)
T cd00954 165 A 165 (288)
T ss_pred C
Confidence 4
No 435
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=50.47 E-value=1.4e+02 Score=25.22 Aligned_cols=76 Identities=12% Similarity=0.060 Sum_probs=40.6
Q ss_pred ChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCC--CCCHHHHHHHHhccCCCCccEEEEEe
Q 017726 68 TGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGE--GAKLDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 68 ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~--~~d~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
+.++++...+.....++.+|+++............++..|+.+..+.+-... ..+.+.+.+.+.+ .+...|++.+
T Consensus 102 ~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~---~~~d~i~f~S 178 (240)
T PRK09189 102 GDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGG---APFDAVLLYS 178 (240)
T ss_pred CCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhc---CCCCEEEEeC
Confidence 3345554444333346677777766544433445566677777766543221 1234455555553 2456677666
Q ss_pred c
Q 017726 146 N 146 (367)
Q Consensus 146 ~ 146 (367)
+
T Consensus 179 ~ 179 (240)
T PRK09189 179 R 179 (240)
T ss_pred H
Confidence 4
No 436
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=50.24 E-value=2.2e+02 Score=26.72 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHhcCCC----------CceE-EecCCh----hHHHHHHHHccCCCCCeEEEEeCCcchHH--H--HH
Q 017726 41 PALTKTLLEDIKKIFKTTS----------GTPF-LIPTTG----TGAWESALTNTLSPGDRIISFLIGQFSLL--W--ID 101 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~~~~----------~~~v-~~~~gg----t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~--~~ 101 (367)
......+++.+++.+.... ...+ ++.++| |.+..++.......|.+|.+.+.+.+... + ..
T Consensus 194 ~~~~~~l~~~L~~~l~~~~~~~~~~g~~~~~vi~lvGptGvGKTTtaaKLA~~~~~~~G~~V~Lit~Dt~R~aA~eQLk~ 273 (432)
T PRK12724 194 HNVTERAVTYLEERVSVDSDLFSGTGKNQRKVVFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKR 273 (432)
T ss_pred HHHHHHHHHHHHHhcccchhhhhhcccCCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEecccchhhhHHHHHHH
Confidence 3455667777777664321 1212 222333 23333333223456777766655443321 1 23
Q ss_pred HHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhc----CCCcEEEEeee
Q 017726 102 QQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEY----RHPALFLVDGV 177 (367)
Q Consensus 102 ~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~----~~~~~vi~D~~ 177 (367)
.++..|+.+..+. ++..+.+.+.. ...++|++.++..+.-....++++.++++.. +...++++|++
T Consensus 274 yAe~lgvp~~~~~-------~~~~l~~~l~~---~~~D~VLIDTaGr~~rd~~~l~eL~~~~~~~~~~~~~e~~LVLsAt 343 (432)
T PRK12724 274 YADTMGMPFYPVK-------DIKKFKETLAR---DGSELILIDTAGYSHRNLEQLERMQSFYSCFGEKDSVENLLVLSST 343 (432)
T ss_pred HHHhcCCCeeehH-------HHHHHHHHHHh---CCCCEEEEeCCCCCccCHHHHHHHHHHHHhhcCCCCCeEEEEEeCC
Confidence 3445555443221 24455555543 3458888887654433334566666666531 24678888877
Q ss_pred ec
Q 017726 178 SS 179 (367)
Q Consensus 178 ~~ 179 (367)
..
T Consensus 344 ~~ 345 (432)
T PRK12724 344 SS 345 (432)
T ss_pred CC
Confidence 54
No 437
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=49.62 E-value=1.8e+02 Score=25.60 Aligned_cols=77 Identities=6% Similarity=-0.025 Sum_probs=44.7
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC--CCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
..+.++..|+.-..+-.+.....+.+.+.+..+.-. .+..-+++... ...||..++.+.+.+++++. .++.-+=|.
T Consensus 87 ~a~~A~~~Gad~v~v~pP~y~~~~~~~l~~~f~~ia~a~~~lpv~iYn~-P~~tg~~l~~~~l~~L~~~~-pnv~giK~s 164 (294)
T TIGR02313 87 LTKFAEEAGADAAMVIVPYYNKPNQEALYDHFAEVADAVPDFPIIIYNI-PGRAAQEIAPKTMARLRKDC-PNIVGAKES 164 (294)
T ss_pred HHHHHHHcCCCEEEEcCccCCCCCHHHHHHHHHHHHHhccCCCEEEEeC-chhcCcCCCHHHHHHHHhhC-CCEEEEEeC
Confidence 446677788877766555444555554444332210 01223333333 34589999999999999653 466666675
Q ss_pred e
Q 017726 177 V 177 (367)
Q Consensus 177 ~ 177 (367)
.
T Consensus 165 s 165 (294)
T TIGR02313 165 N 165 (294)
T ss_pred C
Confidence 4
No 438
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=49.44 E-value=1.9e+02 Score=25.65 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHhc--CCCCceEEecCChhHHHHHHHHccCCCCC--eEEEEe--CCcchHHHHHHHHHhCCceEEEe
Q 017726 41 PALTKTLLEDIKKIFK--TTSGTPFLIPTTGTGAWESALTNTLSPGD--RIISFL--IGQFSLLWIDQQQRLNFNVDVVE 114 (367)
Q Consensus 41 ~~~~~~~~~~la~~~~--~~~~~~v~~~~ggt~al~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~ 114 (367)
.+..++.++.+++.-- ..++ ++++|-|-+.++..++....+.|. +|++.. |.+-+..+.+..+..|+++..+.
T Consensus 99 i~~~~~a~~~ia~~~a~~i~dg-~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~ 177 (301)
T COG1184 99 IDRVEKAKERIAEIGAERIHDG-DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV 177 (301)
T ss_pred HHHHHHHHHHHHHHHHhhccCC-CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe
Confidence 3444455555554322 1233 478888888777777766555554 566643 34444446667777888877775
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCccEEEEEe-cCCCcccccc---HHHHHHHHHhcCCCcEEEEe-eeec
Q 017726 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVH-NETATGVTNN---LSKVRKLLDEYRHPALFLVD-GVSS 179 (367)
Q Consensus 115 ~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~-~~n~tG~~~~---~~~i~~~~~~~~~~~~vi~D-~~~~ 179 (367)
-. ++-..++ ++..|++-. .=...|.+.. -..|+..||+ .++++++= ++|-
T Consensus 178 Ds--------a~~~~~~-----~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e--~~~Pf~v~aesyK 232 (301)
T COG1184 178 DS--------AVGAFMS-----RVDKVLVGADAILANGALVNKIGTSPLALAARE--LRVPFYVVAESYK 232 (301)
T ss_pred ch--------HHHHHHH-----hCCEEEECccceecCCcEEeccchHHHHHHHHH--hCCCEEEEeeeec
Confidence 21 2223333 233443332 1133455554 3457778888 77776643 3443
No 439
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=49.40 E-value=1.5e+02 Score=24.55 Aligned_cols=146 Identities=15% Similarity=0.175 Sum_probs=72.7
Q ss_pred HHHHHHHccCCCCCC---CCcHHHHHHHHHHHHHHHhcCCCCceE-EecCChhHHHHHHHHccCCCCCeEEEEeCCcchH
Q 017726 22 DQVIRAMNRNNEDYR---SPAVPALTKTLLEDIKKIFKTTSGTPF-LIPTTGTGAWESALTNTLSPGDRIISFLIGQFSL 97 (367)
Q Consensus 22 ~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~la~~~~~~~~~~v-~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~ 97 (367)
+..++.+.+...... .........++-..+++..+... .+ +-|..|..++.++- + +.++.+|++.+...-..
T Consensus 8 ~~~l~~l~~~t~~~~~~~~~~i~~~~g~lL~~l~~~~~~k~--vLEIGt~~GySal~la~-~-l~~~g~i~tiE~~~~~~ 83 (205)
T PF01596_consen 8 PELLKELREFTRENQGLPQMSISPETGQLLQMLVRLTRPKR--VLEIGTFTGYSALWLAE-A-LPEDGKITTIEIDPERA 83 (205)
T ss_dssp THHHHHHHHHHHCTTTTGGGSHHHHHHHHHHHHHHHHT-SE--EEEESTTTSHHHHHHHH-T-STTTSEEEEEESSHHHH
T ss_pred CHHHHHHHHHHHhCcCCCCCccCHHHHHHHHHHHHhcCCce--EEEeccccccHHHHHHH-h-hcccceEEEecCcHHHH
Confidence 344555554332221 22234555567777777776554 12 33344445555432 3 34556788777643222
Q ss_pred H-HHHHHHHhCC--ceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 98 L-WIDQQQRLNF--NVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 98 ~-~~~~~~~~g~--~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
. .....+..|. ++..+.-+ -.+-+.+...+.....-++|++... ......-++.+.++++ .|.++++
T Consensus 84 ~~A~~~~~~ag~~~~I~~~~gd-----a~~~l~~l~~~~~~~~fD~VFiDa~--K~~y~~y~~~~~~ll~---~ggvii~ 153 (205)
T PF01596_consen 84 EIARENFRKAGLDDRIEVIEGD-----ALEVLPELANDGEEGQFDFVFIDAD--KRNYLEYFEKALPLLR---PGGVIIA 153 (205)
T ss_dssp HHHHHHHHHTTGGGGEEEEES------HHHHHHHHHHTTTTTSEEEEEEEST--GGGHHHHHHHHHHHEE---EEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEec-----cHhhHHHHHhccCCCceeEEEEccc--ccchhhHHHHHhhhcc---CCeEEEE
Confidence 1 3344455564 34433321 1344455544321124688888863 3333333555555554 5888899
Q ss_pred eeeeccC
Q 017726 175 DGVSSIC 181 (367)
Q Consensus 175 D~~~~~~ 181 (367)
|.+-..|
T Consensus 154 DN~l~~G 160 (205)
T PF01596_consen 154 DNVLWRG 160 (205)
T ss_dssp ETTTGGG
T ss_pred ccccccc
Confidence 9775443
No 440
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=49.38 E-value=1.7e+02 Score=25.03 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=47.0
Q ss_pred CChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCC--CCHHHHHHHHhccCCCCccEEEEE
Q 017726 67 TTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG--AKLDVLASKLAADTAHTIKAICIV 144 (367)
Q Consensus 67 ~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~--~d~e~l~~~i~~~~~~~~~lv~~~ 144 (367)
.+.++++...+......|.+|++.................|+++..+++-.... .+.+.+...+.. ...+.|+++
T Consensus 106 ~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~---~~~d~v~ft 182 (248)
T COG1587 106 DGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKL---GEVDAVVFT 182 (248)
T ss_pred ccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHh---CCCCEEEEe
Confidence 344566666666555557888888774443335566677899999887654332 233444445554 356788887
Q ss_pred ec
Q 017726 145 HN 146 (367)
Q Consensus 145 ~~ 146 (367)
++
T Consensus 183 S~ 184 (248)
T COG1587 183 SS 184 (248)
T ss_pred CH
Confidence 64
No 441
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=48.91 E-value=1.8e+02 Score=25.25 Aligned_cols=64 Identities=13% Similarity=0.007 Sum_probs=30.2
Q ss_pred CeEEEEeCCcchH-HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc
Q 017726 85 DRIISFLIGQFSL-LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN 155 (367)
Q Consensus 85 d~vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~ 155 (367)
|-+++++...--. .+...++..|+.++.+-.+.. +.+.+++..+- ..-.+++.+-.-.||...+
T Consensus 124 dGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPtt---~~~rl~~i~~~----a~GFiY~vs~~GvTG~~~~ 188 (265)
T COG0159 124 DGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPTT---PDERLKKIAEA----ASGFIYYVSRMGVTGARNP 188 (265)
T ss_pred CEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHh----CCCcEEEEecccccCCCcc
Confidence 4455555432222 244555666666555533211 23444444331 1245566666666665554
No 442
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=48.08 E-value=1.2e+02 Score=23.49 Aligned_cols=48 Identities=15% Similarity=0.240 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCCCccCCCceEEEEcCCCCCHHHHHHHHHhhCCeEEcc
Q 017726 273 NVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGL 336 (367)
Q Consensus 273 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~ 336 (367)
.+.++.++.+..+..+|+++|- +.+|..-|..++.+.|.++.|+.|.+
T Consensus 17 ~RERrRRAIaakIfaGLR~~Gn----------------y~Lp~~aD~NeVLkALc~eAGw~Ve~ 64 (150)
T PF05687_consen 17 RRERRRRAIAAKIFAGLRAHGN----------------YKLPKHADNNEVLKALCREAGWTVEP 64 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----------------CCCCCcCCHHHHHHHHHHhCCEEEcc
Confidence 3444556667778888887741 12344557889999999999998864
No 443
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=47.38 E-value=1.1e+02 Score=25.16 Aligned_cols=93 Identities=10% Similarity=0.139 Sum_probs=47.6
Q ss_pred CCeEEEEeCCcchH--H--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHH
Q 017726 84 GDRIISFLIGQFSL--L--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKV 159 (367)
Q Consensus 84 gd~vl~~~~~~~~~--~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i 159 (367)
+.+|.+.....+-. . ....++..|+++.......+ +.+.+.+.+++...++..+|++.++....-....++++
T Consensus 29 ~~~v~lis~D~~R~ga~eQL~~~a~~l~vp~~~~~~~~~---~~~~~~~~l~~~~~~~~D~vlIDT~Gr~~~d~~~~~el 105 (196)
T PF00448_consen 29 GKKVALISADTYRIGAVEQLKTYAEILGVPFYVARTESD---PAEIAREALEKFRKKGYDLVLIDTAGRSPRDEELLEEL 105 (196)
T ss_dssp T--EEEEEESTSSTHHHHHHHHHHHHHTEEEEESSTTSC---HHHHHHHHHHHHHHTTSSEEEEEE-SSSSTHHHHHHHH
T ss_pred cccceeecCCCCCccHHHHHHHHHHHhccccchhhcchh---hHHHHHHHHHHHhhcCCCEEEEecCCcchhhHHHHHHH
Confidence 66665554443422 1 34567888887776554321 12223333332110345799999875433333334555
Q ss_pred HHHHHh-cCCCcEEEEeeeec
Q 017726 160 RKLLDE-YRHPALFLVDGVSS 179 (367)
Q Consensus 160 ~~~~~~-~~~~~~vi~D~~~~ 179 (367)
.++.+. .+..+++++|+...
T Consensus 106 ~~~~~~~~~~~~~LVlsa~~~ 126 (196)
T PF00448_consen 106 KKLLEALNPDEVHLVLSATMG 126 (196)
T ss_dssp HHHHHHHSSSEEEEEEEGGGG
T ss_pred HHHhhhcCCccceEEEecccC
Confidence 555444 23678888887654
No 444
>PLN02417 dihydrodipicolinate synthase
Probab=47.17 E-value=2e+02 Score=25.20 Aligned_cols=75 Identities=8% Similarity=-0.064 Sum_probs=46.5
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+.++..|+.-..+-.+.-+..+.+.+.+..++-. +.+.+++...| ..||.-++.+-+.++++. .++.-+=|.+
T Consensus 88 ~a~~a~~~Gadav~~~~P~y~~~~~~~i~~~f~~va-~~~pi~lYn~P-~~tg~~l~~~~l~~l~~~--pni~giKdss 162 (280)
T PLN02417 88 ATEQGFAVGMHAALHINPYYGKTSQEGLIKHFETVL-DMGPTIIYNVP-GRTGQDIPPEVIFKIAQH--PNFAGVKECT 162 (280)
T ss_pred HHHHHHHcCCCEEEEcCCccCCCCHHHHHHHHHHHH-hhCCEEEEECh-hHhCcCCCHHHHHHHhcC--CCEEEEEeCC
Confidence 445677788887766555445556566555544321 12234444433 368988999999999865 6777777754
No 445
>PLN02683 pyruvate dehydrogenase E1 component subunit beta
Probab=47.07 E-value=99 Score=28.22 Aligned_cols=26 Identities=8% Similarity=-0.022 Sum_probs=15.7
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
+|.+.|.+.+++ ++.++++++.+..|
T Consensus 268 lD~~~l~~~~~~--t~~vvtvEE~~~~G 293 (356)
T PLN02683 268 LDRDTINASVRK--TNRLVTVEEGWPQH 293 (356)
T ss_pred cCHHHHHHHHhh--cCeEEEEeCCCcCC
Confidence 466667777766 66666666554433
No 446
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=47.06 E-value=2.2e+02 Score=25.74 Aligned_cols=89 Identities=11% Similarity=0.045 Sum_probs=47.8
Q ss_pred CCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEE-------EEecCCCccccc
Q 017726 83 PGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAIC-------IVHNETATGVTN 154 (367)
Q Consensus 83 ~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~-------~~~~~n~tG~~~ 154 (367)
+|-.+|+.+..|.... .....+...-.+..+++=..+-.+.|..+++++.. .+.|- +|+..-.+|.=.
T Consensus 121 ~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aG----AD~vKVGIGpGSiCtTr~vtGvG~ 196 (346)
T PRK05096 121 PALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSG----ADIVKVGIGPGSVCTTRVKTGVGY 196 (346)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcC----CCEEEEcccCCccccCccccccCh
Confidence 5656777767554432 22222222111111111123445788888888743 34442 455556677666
Q ss_pred c-HH---HHHHHHHhcCCCcEEEEeee
Q 017726 155 N-LS---KVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 155 ~-~~---~i~~~~~~~~~~~~vi~D~~ 177 (367)
| +. +.++.+++ +|+.||.|+-
T Consensus 197 PQltAV~~~a~~a~~--~gvpiIADGG 221 (346)
T PRK05096 197 PQLSAVIECADAAHG--LGGQIVSDGG 221 (346)
T ss_pred hHHHHHHHHHHHHHH--cCCCEEecCC
Confidence 6 34 44555555 8999999963
No 447
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=46.82 E-value=6.6 Score=31.55 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=50.0
Q ss_pred HHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCCCcc
Q 017726 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQKAL 203 (367)
Q Consensus 124 e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~K~~ 203 (367)
++++.+++ .++..+++. +|.+..++.+.+.++++..-++|++|-..+++.-. .+.+++ |-.
T Consensus 10 ~~l~~al~----s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D~-----~~i~~L-----~~~ 70 (175)
T PF04309_consen 10 EDLEKALE----SDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRDE-----AGIEYL-----KEY 70 (175)
T ss_dssp CCCCCCCC----SSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SSH-----HHHHHH-----HHT
T ss_pred HHHHHHHc----CCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCCH-----HHHHHH-----HHc
Confidence 34444554 345777775 48899999999999996666778889888765422 122322 112
Q ss_pred cCCCcceeeeeCHHHHHHhccC
Q 017726 204 SLPTGMGIVCASPKALEASKTA 225 (367)
Q Consensus 204 ~g~~g~g~~~~~~~~~~~~~~~ 225 (367)
. .+ -|++..++..++.....
T Consensus 71 ~-~~-dGIISTk~~~i~~Ak~~ 90 (175)
T PF04309_consen 71 G-KP-DGIISTKSNLIKRAKKL 90 (175)
T ss_dssp T----SEEEESSHHHHHHHHHT
T ss_pred C-CC-cEEEeCCHHHHHHHHHc
Confidence 1 12 28888888887766643
No 448
>PF13941 MutL: MutL protein
Probab=46.40 E-value=1.6e+02 Score=28.00 Aligned_cols=89 Identities=11% Similarity=-0.022 Sum_probs=49.3
Q ss_pred cHHHHHHHHHHHHHHHhcCC---CCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEe
Q 017726 39 AVPALTKTLLEDIKKIFKTT---SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVE 114 (367)
Q Consensus 39 ~~~~~~~~~~~~la~~~~~~---~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~ 114 (367)
+......+..+.+.+..+.. .-+.++.|+|+.++|.+++..+. + ..+.. ...++...|+++..+-
T Consensus 40 Dv~~G~~~A~~~l~~~~~~~~~~~~~~~la~SSAaGGLrmvv~Glv----------~-~~Ta~AAk~AAlgAGA~V~~v~ 108 (457)
T PF13941_consen 40 DVTIGLNNALEQLEEQTPASPDDGYDKVLACSSAAGGLRMVVIGLV----------P-DLTAEAAKRAALGAGARVLQVY 108 (457)
T ss_pred cHHHHHHHHHHHHHHhcCCCcccCceEEEEECCCCCcceEEEEecC----------H-HHHHHHHHHHHhcCCcEEEEEe
Confidence 44556667777777777653 23447888888777765443321 1 11111 2344555667666664
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCccEEEEEe
Q 017726 115 SDWGEGAKLDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 115 ~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
.. .+.-+++++... -+|++|+++.
T Consensus 109 s~---~l~~~~l~~i~~----~~PDiILLaG 132 (457)
T PF13941_consen 109 SY---ELTEEDLEEIRE----IRPDIILLAG 132 (457)
T ss_pred cc---CCCHHHHHHHhc----cCCCEEEEeC
Confidence 33 344556655443 3567777653
No 449
>PRK14723 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=46.07 E-value=3.5e+02 Score=27.72 Aligned_cols=88 Identities=18% Similarity=0.111 Sum_probs=47.8
Q ss_pred CCC-CeEEEEeCCcchH----HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH
Q 017726 82 SPG-DRIISFLIGQFSL----LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL 156 (367)
Q Consensus 82 ~~g-d~vl~~~~~~~~~----~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~ 156 (367)
..| .+|.+...+.+-. .+...++..|+++..+. |++++.+.+.+.. ..++|++.++.-......-+
T Consensus 212 ~~G~kkV~lit~Dt~RigA~eQL~~~a~~~gvpv~~~~-------~~~~l~~al~~~~--~~D~VLIDTAGRs~~d~~l~ 282 (767)
T PRK14723 212 REGADQLALLTTDSFRIGALEQLRIYGRILGVPVHAVK-------DAADLRFALAALG--DKHLVLIDTVGMSQRDRNVS 282 (767)
T ss_pred HcCCCeEEEecCcccchHHHHHHHHHHHhCCCCccccC-------CHHHHHHHHHHhc--CCCEEEEeCCCCCccCHHHH
Confidence 344 4665555544431 24456677776554332 5677777776542 44788888764222111223
Q ss_pred HHHHHHHHh-cCCCcEEEEeeee
Q 017726 157 SKVRKLLDE-YRHPALFLVDGVS 178 (367)
Q Consensus 157 ~~i~~~~~~-~~~~~~vi~D~~~ 178 (367)
+++..+++. .+..+++++|++.
T Consensus 283 eel~~l~~~~~p~e~~LVLsAt~ 305 (767)
T PRK14723 283 EQIAMLCGVGRPVRRLLLLNAAS 305 (767)
T ss_pred HHHHHHhccCCCCeEEEEECCCC
Confidence 444444433 3467788888764
No 450
>PRK11823 DNA repair protein RadA; Provisional
Probab=45.87 E-value=2.2e+02 Score=26.91 Aligned_cols=86 Identities=10% Similarity=0.118 Sum_probs=48.7
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc--------ccc
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--------GVT 153 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t--------G~~ 153 (367)
..|.+|++...+.........++++|.....+....+ .+++++.+.+++ .++++|++.+.++.. |..
T Consensus 106 ~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e--~~l~~i~~~i~~---~~~~lVVIDSIq~l~~~~~~~~~g~~ 180 (446)
T PRK11823 106 AAGGKVLYVSGEESASQIKLRAERLGLPSDNLYLLAE--TNLEAILATIEE---EKPDLVVIDSIQTMYSPELESAPGSV 180 (446)
T ss_pred hcCCeEEEEEccccHHHHHHHHHHcCCChhcEEEeCC--CCHHHHHHHHHh---hCCCEEEEechhhhccccccCCCCCH
Confidence 4466777665543322233345666764333322211 357888888865 467899998876432 222
Q ss_pred cc----HHHHHHHHHhcCCCcEEEE
Q 017726 154 NN----LSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 154 ~~----~~~i~~~~~~~~~~~~vi~ 174 (367)
.. +..+.+++++ +|+.++.
T Consensus 181 ~qvr~~~~~L~~~ak~--~~itvil 203 (446)
T PRK11823 181 SQVRECAAELMRLAKQ--RGIAVFL 203 (446)
T ss_pred HHHHHHHHHHHHHHHH--cCCEEEE
Confidence 11 2357888888 7775553
No 451
>KOG2648 consensus Diphthamide biosynthesis protein [Translation, ribosomal structure and biogenesis]
Probab=45.53 E-value=39 Score=31.36 Aligned_cols=80 Identities=14% Similarity=0.170 Sum_probs=57.8
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh-cCCCcEEEEeeeeccCcee-eccccccceEEEec
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE-YRHPALFLVDGVSSICAID-FRMDEWGIDVALTG 198 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~-~~~~~~vi~D~~~~~~~~~-~~~~~~~~d~~~~s 198 (367)
...+.....|+... .+=|.+ +-|-|.+.+-..|.++.++ .+..++|+-|-+|+..+.+ +.....++|+++.-
T Consensus 36 fEi~ktv~~Ir~~~---~kRVAL---QfPD~LL~~S~~I~~ile~~~~~k~~VLaDttYGsCCVDevaA~h~~ad~lVHy 109 (453)
T KOG2648|consen 36 FEIHKTVWFIRSLG---AKRVAL---QFPDGLLMYSCKISDILESFTGAKTFVLGDTTYGSCCVDEVAAEHLDADALVHY 109 (453)
T ss_pred hhhhhHHHHHHhCC---ceEEEE---eCChHHhhHHHHHHHHHHHhccccEEEEecCcccccccchHHHhhcCCCEEEEe
Confidence 34455555565532 233444 4578999988888888888 5679999999999998864 33345689999999
Q ss_pred CCCcccCC
Q 017726 199 SQKALSLP 206 (367)
Q Consensus 199 ~~K~~~g~ 206 (367)
+|-++..+
T Consensus 110 G~aCLsp~ 117 (453)
T KOG2648|consen 110 GHACLSPI 117 (453)
T ss_pred cccccCcc
Confidence 99998643
No 452
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=44.37 E-value=1.8e+02 Score=27.69 Aligned_cols=87 Identities=8% Similarity=-0.005 Sum_probs=48.2
Q ss_pred cCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCc--------c
Q 017726 80 TLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETAT--------G 151 (367)
Q Consensus 80 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~t--------G 151 (367)
+...|.+|++...+.........+++.|.....+..-.+ .+++.+.+.+++ .++++|++.+.++.. |
T Consensus 118 ~a~~g~kvlYvs~EEs~~qi~~ra~rlg~~~~~l~~~~e--~~~~~I~~~i~~---~~~~~vVIDSIq~l~~~~~~~~~g 192 (454)
T TIGR00416 118 LAKNQMKVLYVSGEESLQQIKMRAIRLGLPEPNLYVLSE--TNWEQICANIEE---ENPQACVIDSIQTLYSPDISSAPG 192 (454)
T ss_pred HHhcCCcEEEEECcCCHHHHHHHHHHcCCChHHeEEcCC--CCHHHHHHHHHh---cCCcEEEEecchhhcccccccCCC
Confidence 344556777766643322232334556654332222212 367888888876 467899998776432 2
Q ss_pred cccc----HHHHHHHHHhcCCCcEEE
Q 017726 152 VTNN----LSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 152 ~~~~----~~~i~~~~~~~~~~~~vi 173 (367)
.... +..+.+++++ +|+.++
T Consensus 193 ~~~q~r~~~~~L~~~ak~--~giTvl 216 (454)
T TIGR00416 193 SVSQVRECTAELMRLAKT--RGIAIF 216 (454)
T ss_pred CHHHHHHHHHHHHHHHHH--hCCEEE
Confidence 2222 2347778888 776544
No 453
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated
Probab=44.32 E-value=1.1e+02 Score=27.59 Aligned_cols=27 Identities=11% Similarity=0.223 Sum_probs=17.6
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
+|.+.|.+.+++ ++.+|++++.+..+.
T Consensus 241 lD~~~i~~~~~~--t~~vv~vEE~~~~gG 267 (327)
T CHL00144 241 LDLGTISKSVKK--THKVLIVEECMKTGG 267 (327)
T ss_pred CCHHHHHHHHHh--hCcEEEEECCCCCCC
Confidence 466677777777 666777776654443
No 454
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=44.12 E-value=2.2e+02 Score=25.00 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=45.2
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+.++..|+.-..+-.+.....+.+.+.+-.++-.. -...+++... ...||.-++.+.+.++++. .|+.-+=|..
T Consensus 91 ~a~~a~~~Gad~v~v~~P~y~~~~~~~l~~~f~~va~a~~lPv~iYn~-P~~tg~~l~~~~l~~L~~~--pnvvgiK~s~ 167 (293)
T PRK04147 91 LAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSADNPMIVYNI-PALTGVNLSLDQFNELFTL--PKVIGVKQTA 167 (293)
T ss_pred HHHHHHHcCCCEEEEeCCcCCCCCHHHHHHHHHHHHHhCCCCEEEEeC-chhhccCCCHHHHHHHhcC--CCEEEEEeCC
Confidence 4466677888777665554444455554443332110 1122333333 3458999999999999965 6787777754
No 455
>PRK08811 uroporphyrinogen-III synthase; Validated
Probab=43.91 E-value=63 Score=28.07 Aligned_cols=64 Identities=6% Similarity=-0.134 Sum_probs=40.3
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecC
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE 147 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~ 147 (367)
-.|.+|+++.|...+..+....+..|.++..+|.-.-...+...+...+.+. ...+.|+++++|
T Consensus 16 l~g~~IlvTRp~~q~~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~l~~l--~~~d~iiftS~N 79 (266)
T PRK08811 16 DAAWTLISLRPSGEHAPLRRAVARHGGRLLALSPWRLQRLDTAQARDALRQA--LAAPIVVFTSPA 79 (266)
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHHCCCcEEEcCceeecCCCchhHHHHHhhc--ccCCEEEEECHH
Confidence 4688999999987776677788889999998876211111112233333321 134688888764
No 456
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional
Probab=43.63 E-value=1.3e+02 Score=27.52 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=17.6
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
+|.+.|.+.+++ .+.++++++....+
T Consensus 273 ld~e~i~~~~~~--~~~IvvvEE~~~~G 298 (355)
T PTZ00182 273 WDRETIVKSVKK--TGRCVIVHEAPPTC 298 (355)
T ss_pred CCHHHHHHHHhc--CCEEEEEEeCCCCC
Confidence 567778888877 66666677665443
No 457
>PRK00685 metal-dependent hydrolase; Provisional
Probab=43.59 E-value=1.9e+02 Score=24.03 Aligned_cols=60 Identities=12% Similarity=0.018 Sum_probs=36.0
Q ss_pred HHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh
Q 017726 103 QQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE 165 (367)
Q Consensus 103 ~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~ 165 (367)
.+..++.+..++....+.+++++..+...+ -++|.++.+|-.+......+.+++.+.+++
T Consensus 153 ~~~~~~D~~~~~~~~~~h~~~~ea~~~~~~---~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~ 212 (228)
T PRK00685 153 GELHKPDVALLPIGDNFTMGPEDAALAVEL---IKPKIVIPMHYNTFPLIEQDPEKFKALVEG 212 (228)
T ss_pred HHhhCCCEEEEecCCccccCHHHHHHHHHh---hCCCEEEEeccCCCcCCcCCHHHHHHHHHh
Confidence 333566777776654445777777666554 246778877765332223456677776665
No 458
>smart00642 Aamy Alpha-amylase domain.
Probab=43.55 E-value=25 Score=28.09 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=26.0
Q ss_pred cCCCccccccHHHHHHHHHhcCCCcEEEEeeeec
Q 017726 146 NETATGVTNNLSKVRKLLDEYRHPALFLVDGVSS 179 (367)
Q Consensus 146 ~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~ 179 (367)
++...|+..+++++++.||+ +|+.|+.|.+..
T Consensus 62 i~~~~Gt~~d~~~lv~~~h~--~Gi~vilD~V~N 93 (166)
T smart00642 62 IDPRFGTMEDFKELVDAAHA--RGIKVILDVVIN 93 (166)
T ss_pred CCcccCCHHHHHHHHHHHHH--CCCEEEEEECCC
Confidence 33456888889999999999 999999997643
No 459
>PRK05703 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=42.93 E-value=2.9e+02 Score=25.96 Aligned_cols=128 Identities=14% Similarity=0.130 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHhcCCC------CceEEe-cCCh---h-HHHHHHHHcc-CCCCCeEEEEeCCcchHH----HHHHHHHh
Q 017726 43 LTKTLLEDIKKIFKTTS------GTPFLI-PTTG---T-GAWESALTNT-LSPGDRIISFLIGQFSLL----WIDQQQRL 106 (367)
Q Consensus 43 ~~~~~~~~la~~~~~~~------~~~v~~-~~gg---t-~al~~~~~~~-~~~gd~vl~~~~~~~~~~----~~~~~~~~ 106 (367)
....+++.+++.+.... ...+++ .++| | .+..++.... ...|.+|.+.+...+..- +...++..
T Consensus 198 ~~~~~~~~L~~~l~~~~~~~~~~~~~i~~vGptGvGKTTt~~kLA~~~~~~~~g~~V~li~~D~~r~~a~eqL~~~a~~~ 277 (424)
T PRK05703 198 AWRYLLELLANMIPVRVEDILKQGGVVALVGPTGVGKTTTLAKLAARYALLYGKKKVALITLDTYRIGAVEQLKTYAKIM 277 (424)
T ss_pred HHHHHHHHHHHHhCccccccccCCcEEEEECCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCccHHHHHHHHHHHHHHh
Confidence 45567777777776542 122333 3333 2 2333333222 345667776665444211 22335556
Q ss_pred CCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHh--cCCCcEEEEeeeec
Q 017726 107 NFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDE--YRHPALFLVDGVSS 179 (367)
Q Consensus 107 g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~--~~~~~~vi~D~~~~ 179 (367)
|+.+..+. +.+++...+.+. .+.++|++..+....-....+.++.++.+. .+..+.++++....
T Consensus 278 ~vp~~~~~-------~~~~l~~~l~~~--~~~DlVlIDt~G~~~~d~~~~~~L~~ll~~~~~~~~~~LVl~a~~~ 343 (424)
T PRK05703 278 GIPVEVVY-------DPKELAKALEQL--RDCDVILIDTAGRSQRDKRLIEELKALIEFSGEPIDVYLVLSATTK 343 (424)
T ss_pred CCceEccC-------CHHhHHHHHHHh--CCCCEEEEeCCCCCCCCHHHHHHHHHHHhccCCCCeEEEEEECCCC
Confidence 66554332 345666666543 246889998875433323335556666552 12356777776543
No 460
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=42.84 E-value=2e+02 Score=24.13 Aligned_cols=98 Identities=12% Similarity=0.158 Sum_probs=59.5
Q ss_pred EEecCChhHHHHHHHHccCCCCCeE---EEEeCCc---ch----HH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHH
Q 017726 63 FLIPTTGTGAWESALTNTLSPGDRI---ISFLIGQ---FS----LL--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKL 130 (367)
Q Consensus 63 v~~~~ggt~al~~~~~~~~~~gd~v---l~~~~~~---~~----~~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i 130 (367)
+.+-+||-+++.++..++- .|-.| ++..|.. +. +. ..-.++..|+++......-...-..+++.+++
T Consensus 4 ~aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l 82 (223)
T COG2102 4 IALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEAL 82 (223)
T ss_pred EEEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHH
Confidence 5666888888776665532 33322 2222211 11 11 33567888999988887643334578888888
Q ss_pred hccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEE
Q 017726 131 AADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 131 ~~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi 173 (367)
+.- +...|+ +|.+.. ...+..+|++ -|+.++
T Consensus 83 ~~l---~~d~iv-------~GaI~s~yqk~rve~lc~~--lGl~~~ 116 (223)
T COG2102 83 RRL---KVDGIV-------AGAIASEYQKERVERLCEE--LGLKVY 116 (223)
T ss_pred HhC---cccEEE-------EchhhhHHHHHHHHHHHHH--hCCEEe
Confidence 742 223443 577764 6779999999 777654
No 461
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=42.77 E-value=1.5e+02 Score=28.03 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=19.3
Q ss_pred cEEEEEecCCCccccccHH---HHHHHHHhcCCCcEEEEe
Q 017726 139 KAICIVHNETATGVTNNLS---KVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 139 ~lv~~~~~~n~tG~~~~~~---~i~~~~~~~~~~~~vi~D 175 (367)
++++=+|.--..|.++... .+.-.++. +|++|++=
T Consensus 430 kvfLGahailsNG~vysR~GTa~valvAna--~nVPVlVC 467 (556)
T KOG1467|consen 430 KVFLGAHAILSNGAVYSRVGTACVALVANA--FNVPVLVC 467 (556)
T ss_pred eeeechhhhhcCcchhhhcchHHHHHHhcc--cCCCEEEE
Confidence 4444344444667777632 35555555 77876654
No 462
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=42.23 E-value=31 Score=30.23 Aligned_cols=63 Identities=10% Similarity=0.080 Sum_probs=41.5
Q ss_pred HHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeee
Q 017726 102 QQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 102 ~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
..+.+|++.+.+.--.. .......-...-...++...|+..+++++++.||+ +|+.||+|-+.
T Consensus 12 yl~~lGv~~I~l~Pi~~------------~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~--~gi~VilD~V~ 74 (316)
T PF00128_consen 12 YLKDLGVNAIWLSPIFE------------SPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHK--RGIKVILDVVP 74 (316)
T ss_dssp HHHHHTESEEEESS-EE------------SSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHH--TTCEEEEEEET
T ss_pred HHHHcCCCceecccccc------------cccccccccceeeeccccccchhhhhhhhhhcccc--ccceEEEeeec
Confidence 45668888887752211 00000122333344566678999999999999999 99999999764
No 463
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=41.05 E-value=97 Score=19.93 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=30.1
Q ss_pred CCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEE
Q 017726 118 GEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 118 ~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi 173 (367)
++..+++++.+...+ .+-+.+.++.-+|..|. .++.+.+++ .|+.++
T Consensus 12 ~~~~~~~~~~~~a~~---~g~~~v~iTDh~~~~~~----~~~~~~~~~--~gi~~i 58 (67)
T smart00481 12 DGALSPEELVKRAKE---LGLKAIAITDHGNLFGA----VEFYKAAKK--AGIKPI 58 (67)
T ss_pred cccCCHHHHHHHHHH---cCCCEEEEeeCCcccCH----HHHHHHHHH--cCCeEE
Confidence 445567777776665 35678877776555553 466677777 776654
No 464
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=40.17 E-value=1.8e+02 Score=24.57 Aligned_cols=65 Identities=8% Similarity=0.194 Sum_probs=39.9
Q ss_pred HHHHHHHhCCceEEE-eCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 99 WIDQQQRLNFNVDVV-ESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v-~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
+...++..|.++..+ +...+..--.+.++.++. .+++.|++.... ++ ....+.+-|++ .|++|+.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~----~~~d~Iiv~~~~-~~----~~~~~l~~~~~--~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAIS----QGVDGIIVSPVD-PD----SLAPFLEKAKA--AGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHH----TTESEEEEESSS-TT----TTHHHHHHHHH--TTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHH----hcCCEEEecCCC-HH----HHHHHHHHHhh--cCceEEE
Confidence 456778889998886 444332222356666666 467888876543 22 23345555777 8998774
No 465
>PLN02476 O-methyltransferase
Probab=40.16 E-value=2.6e+02 Score=24.55 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhcCCCCceE--EecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHHHHHhCCc--eEEEeCC
Q 017726 42 ALTKTLLEDIKKIFKTTSGTPF--LIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFN--VDVVESD 116 (367)
Q Consensus 42 ~~~~~~~~~la~~~~~~~~~~v--~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~--~~~v~~~ 116 (367)
....++...+.+..+... + +-|..|..++.++. + +.++.+|++.+...-... .....+..|.. +..+.-+
T Consensus 104 ~~~g~lL~~L~~~~~ak~---VLEIGT~tGySal~lA~-a-l~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd 178 (278)
T PLN02476 104 PDQAQLLAMLVQILGAER---CIEVGVYTGYSSLAVAL-V-LPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL 178 (278)
T ss_pred HHHHHHHHHHHHhcCCCe---EEEecCCCCHHHHHHHH-h-CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 444566666776666543 3 44444555555433 2 334556666655322221 23344556664 2222211
Q ss_pred CCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 117 WGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 117 ~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
-.+.|.+...+.....-++|++... ......-++.+.++.+ .|.++++|.+...|
T Consensus 179 -----A~e~L~~l~~~~~~~~FD~VFIDa~--K~~Y~~y~e~~l~lL~---~GGvIV~DNvL~~G 233 (278)
T PLN02476 179 -----AAESLKSMIQNGEGSSYDFAFVDAD--KRMYQDYFELLLQLVR---VGGVIVMDNVLWHG 233 (278)
T ss_pred -----HHHHHHHHHhcccCCCCCEEEECCC--HHHHHHHHHHHHHhcC---CCcEEEEecCccCC
Confidence 1234444332211134678888764 2222222444444443 57778889775544
No 466
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=40.07 E-value=2.4e+02 Score=24.15 Aligned_cols=115 Identities=15% Similarity=0.092 Sum_probs=58.7
Q ss_pred HHHHHHHHHhcCCCCceEEecCChhHHHHHHHHc-cCCCC-CeEEEEeCC--cch-H-HHHHHHHHhCCceEEEeCCCCC
Q 017726 46 TLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTN-TLSPG-DRIISFLIG--QFS-L-LWIDQQQRLNFNVDVVESDWGE 119 (367)
Q Consensus 46 ~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~-~~~~g-d~vl~~~~~--~~~-~-~~~~~~~~~g~~~~~v~~~~~~ 119 (367)
.+.+.++..+..+.+- .++.+||-.+-.++..+ -.... -..++...+ ... . .....++..|++...+..+
T Consensus 3 ~l~~av~~~~~~~~~v-~~~LSGGlDSs~va~~~~~~~~~~~~~~~~~~~~~~~~e~~~a~~~a~~l~~~~~~~~~~--- 78 (269)
T cd01991 3 LLEDAVRRRLRSDVPV-GVLLSGGLDSSLVAALAARLLPEPVKTFSIGFGFEGSDEREYARRVAEHLGTEHHEVEFT--- 78 (269)
T ss_pred HHHHHHHHHhccCCce-EEeecccHHHHHHHHHHHHhhCCCCceEEEeeCCCCCChHHHHHHHHHHhCCcceEEEcC---
Confidence 4566677666665543 56667776544433322 11111 122332221 111 1 2456788889888888754
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccc--cccHHHHHHHHHhcCCCcEEEEeeee
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGV--TNNLSKVRKLLDEYRHPALFLVDGVS 178 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~--~~~~~~i~~~~~~~~~~~~vi~D~~~ 178 (367)
.+++.+.+.+ ++ ....+|.+. ..+...+.+.+++ +++.++.++..
T Consensus 79 ---~~~~~~~~~~-------~~--~~~~~p~~~~~~~~~~~l~~~a~~--~~~~v~l~G~g 125 (269)
T cd01991 79 ---PADLLAALPD-------VI--WELDEPFADSSAIPLYLLSRLARK--HGIKVVLSGEG 125 (269)
T ss_pred ---HHHHHHHHHH-------HH--HHhCCCCCCcHHHHHHHHHHHHHH--hCCEEEEecCC
Confidence 3444443331 11 111223332 2356678888888 77777776543
No 467
>PRK11892 pyruvate dehydrogenase subunit beta; Provisional
Probab=39.55 E-value=1.4e+02 Score=28.37 Aligned_cols=27 Identities=7% Similarity=0.016 Sum_probs=17.9
Q ss_pred cccHHHHHHHHHhcCCCcEEEEeeeeccC
Q 017726 153 TNNLSKVRKLLDEYRHPALFLVDGVSSIC 181 (367)
Q Consensus 153 ~~~~~~i~~~~~~~~~~~~vi~D~~~~~~ 181 (367)
.+|.+.|.+.+++ .+.+|++++.+..+
T Consensus 379 PlD~~~i~~sv~k--t~~vvtvEE~~~~g 405 (464)
T PRK11892 379 PMDTETIVESVKK--TNRLVTVEEGWPQS 405 (464)
T ss_pred cCCHHHHHHHHHh--cCeEEEEeCCCcCC
Confidence 3567777777777 66667777665443
No 468
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=39.31 E-value=1.5e+02 Score=25.56 Aligned_cols=76 Identities=11% Similarity=0.034 Sum_probs=41.3
Q ss_pred HHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccc---cccHHHHHHHHHhcCCCcEEEEee
Q 017726 101 DQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGV---TNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 101 ~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~---~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
.+++..|-.=+.|-+......+++++..+++.-.. .+.++ ++|.-....|. +.|+..+--+ |+ .+.+||+|.
T Consensus 107 ~LL~a~g~t~kpV~lKrG~~~t~~e~l~aaeyi~~~Gn~~v-iLcERG~tf~y~r~~~D~~~ip~~-k~--~~~PVi~Dp 182 (258)
T TIGR01362 107 DLLVAAAKTGRIVNVKKGQFLSPWDMKNVVEKVLSTGNKNI-LLCERGTSFGYNNLVVDMRSLPIM-RE--LGCPVIFDA 182 (258)
T ss_pred HHHHHHhccCCeEEecCCCcCCHHHHHHHHHHHHHcCCCcE-EEEeCCCCcCCCCcccchhhhHHH-Hh--cCCCEEEeC
Confidence 33344443333344444444677765544443110 23344 45544444465 5677777755 55 579999999
Q ss_pred eecc
Q 017726 177 VSSI 180 (367)
Q Consensus 177 ~~~~ 180 (367)
+|+.
T Consensus 183 SHsv 186 (258)
T TIGR01362 183 THSV 186 (258)
T ss_pred Cccc
Confidence 9985
No 469
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=39.23 E-value=2.7e+02 Score=24.46 Aligned_cols=76 Identities=12% Similarity=0.056 Sum_probs=42.9
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+.++..|+.-..+-.+.-...+.+.+.+..++-.. -...+++...| ..+|..++.+-+.++++. .++.-+=|..
T Consensus 88 ~a~~a~~~G~d~v~~~pP~~~~~~~~~i~~~~~~ia~~~~~pv~lYn~P-~~~g~~l~~~~~~~L~~~--p~v~giK~s~ 164 (292)
T PRK03170 88 LTKFAEKAGADGALVVTPYYNKPTQEGLYQHFKAIAEATDLPIILYNVP-GRTGVDILPETVARLAEH--PNIVGIKEAT 164 (292)
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHhcCCCCEEEEECc-cccCCCCCHHHHHHHHcC--CCEEEEEECC
Confidence 3456667787766664443334444554444332110 11234444443 357888898888888754 6777777754
No 470
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.50 E-value=1.2e+02 Score=27.70 Aligned_cols=60 Identities=15% Similarity=0.033 Sum_probs=36.5
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEec-----C-CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHN-----E-TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~-----~-n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
.+++++..+++.-......=|++|+. . ..+=...|+..|..+-+. .+++||+|.+|+.|.
T Consensus 219 ~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~--~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 219 ATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSL--THLPIMIDPSHGTGK 284 (352)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHh--hCCCEEECCcccCCc
Confidence 36776666654311012233555554 2 122345688888888665 689999999998764
No 471
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=38.19 E-value=2e+02 Score=26.46 Aligned_cols=78 Identities=17% Similarity=0.109 Sum_probs=45.1
Q ss_pred ChhHHHHHHHHccCCCCCeEEEEeCC-----cchHHHHHHHHHhCCceEEEeCCCCCCC-C---HHHHHHHHhccCCCCc
Q 017726 68 TGTGAWESALTNTLSPGDRIISFLIG-----QFSLLWIDQQQRLNFNVDVVESDWGEGA-K---LDVLASKLAADTAHTI 138 (367)
Q Consensus 68 ggt~al~~~~~~~~~~gd~vl~~~~~-----~~~~~~~~~~~~~g~~~~~v~~~~~~~~-d---~e~l~~~i~~~~~~~~ 138 (367)
+.++++...+.....+|.+|++...+ ..........+..|+++..+++-..... + .+.+.+.+.+ .+.
T Consensus 126 ~~~e~L~~~l~~~~~~g~~vli~~~~~~~~~~~~~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~~~~l~~---~~~ 202 (381)
T PRK07239 126 ESSAEVLEYLLEEGVAGKRIAVQLHGATDEWEPLPEFLEALRAAGAEVVPVPVYRWVPPPDPGPLDRLVDAIAS---RGL 202 (381)
T ss_pred CccHHHHHHHhcCCCCCCEEEEEcCCCccccCchHHHHHHHHHCCCEEEEeCcEEEcCCCChhHHHHHHHHHHc---CCc
Confidence 33456655554444578888887543 2222245667778999998876422211 1 2345555553 246
Q ss_pred cEEEEEecCC
Q 017726 139 KAICIVHNET 148 (367)
Q Consensus 139 ~lv~~~~~~n 148 (367)
..|++++++.
T Consensus 203 d~v~FtS~st 212 (381)
T PRK07239 203 DAVTFTSAPA 212 (381)
T ss_pred cEEEEcCHHH
Confidence 7888887644
No 472
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.16 E-value=1e+02 Score=26.48 Aligned_cols=60 Identities=13% Similarity=0.048 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHhccCC-CCccEEEEEe-c--C--CCccccccHHHHHHHHHhcCCCcEEEEeeeeccCc
Q 017726 120 GAKLDVLASKLAADTA-HTIKAICIVH-N--E--TATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICA 182 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~-~~~~lv~~~~-~--~--n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~ 182 (367)
..++++++.+++.-.. ...+++ +++ . . +++-...|+..|..+.+. .+++|++|.+|+.|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~i~-L~eRg~~~Y~~~~~n~~dl~ai~~lk~~--~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSNII-LCERGVRGYDVETRNMLDIMAVPIIQQK--TDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCeEE-EEccccCCCCCccccccCHHHHHHHHHH--hCCCeEECCCCCCcc
Confidence 3567766666554110 123444 443 2 1 233335678888888777 789999999998764
No 473
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=37.89 E-value=1.3e+02 Score=28.45 Aligned_cols=84 Identities=6% Similarity=-0.065 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhcCCC----CceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHH-HHHHHHHhCCceEEEeCCCC
Q 017726 44 TKTLLEDIKKIFKTTS----GTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWG 118 (367)
Q Consensus 44 ~~~~~~~la~~~~~~~----~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~ 118 (367)
..+..+.+.+.++... ....+.|+|+.++|.+++..+. + ..+.. ...++...|+++..+-.-+
T Consensus 40 ~~~a~~~l~~~~~~~~~~~~~~~~~acSSAaGGLkmvv~Glv----------~-~~TaeAAk~AAlgAGA~V~~~~a~~- 107 (463)
T TIGR01319 40 FNKANEKLNEDLAGKELNSGEVAKKACSSAAGGLAMAAIGLV----------P-EITAEAAKRAAHGAGAKIANVYAYD- 107 (463)
T ss_pred HHHHHHHHHHhcCCcccccccceEEEEcccCCChheEEEecc----------c-hhhHHHHHHHHhcCCcEEEEEEeec-
Confidence 4455555555555431 1247888888888876554332 1 12222 3345555677766643322
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEe
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVH 145 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~ 145 (367)
++..++++... -+|++|+++.
T Consensus 108 --l~~~~l~~I~~----~~PDIILLaG 128 (463)
T TIGR01319 108 --LNNKDIEAIEE----SNLDIILFAG 128 (463)
T ss_pred --CCHHHHHHHhh----cCCCEEEEeC
Confidence 23344444433 3556666653
No 474
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=37.39 E-value=2.6e+02 Score=23.73 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=55.6
Q ss_pred CCCeEEEEeCCc---chHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE-EEEecCCCccccc-c--
Q 017726 83 PGDRIISFLIGQ---FSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI-CIVHNETATGVTN-N-- 155 (367)
Q Consensus 83 ~gd~vl~~~~~~---~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv-~~~~~~n~tG~~~-~-- 155 (367)
.|-..++...+. ...+.....+..|.+. -+-.++.. +++.++..+.. .+.| +++-..--.|..+ |
T Consensus 81 aGad~it~H~Ea~~~~~~~~i~~Ik~~G~ka-GlalnP~T--~~~~l~~~l~~-----vD~VLvMsV~PGf~GQ~fi~~~ 152 (229)
T PRK09722 81 AGADFITLHPETINGQAFRLIDEIRRAGMKV-GLVLNPET--PVESIKYYIHL-----LDKITVMTVDPGFAGQPFIPEM 152 (229)
T ss_pred cCCCEEEECccCCcchHHHHHHHHHHcCCCE-EEEeCCCC--CHHHHHHHHHh-----cCEEEEEEEcCCCcchhccHHH
Confidence 344455544542 2223445667778765 34445443 56788877763 3455 3333223334333 2
Q ss_pred ---HHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecC
Q 017726 156 ---LSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGS 199 (367)
Q Consensus 156 ---~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~ 199 (367)
+++++++.++...++.+-+|+.=..... ..+.+.|+|+++.++
T Consensus 153 l~KI~~lr~~~~~~~~~~~IeVDGGI~~~~i-~~~~~aGad~~V~Gs 198 (229)
T PRK09722 153 LDKIAELKALRERNGLEYLIEVDGSCNQKTY-EKLMEAGADVFIVGT 198 (229)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEECCCCHHHH-HHHHHcCCCEEEECh
Confidence 4445555555334577889964221111 133455889887654
No 475
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=37.37 E-value=2.9e+02 Score=24.28 Aligned_cols=84 Identities=6% Similarity=-0.015 Sum_probs=44.3
Q ss_pred EecCChhHHHHHHHHccCC---CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCH-HHHHHHHhccCCCCcc
Q 017726 64 LIPTTGTGAWESALTNTLS---PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL-DVLASKLAADTAHTIK 139 (367)
Q Consensus 64 ~~~~ggt~al~~~~~~~~~---~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~-e~l~~~i~~~~~~~~~ 139 (367)
++.+|....++.++.+... +.+.+++... +... ...++..|+++..++.....+.+. +++.+.+.+ .++.
T Consensus 89 vl~Sg~g~nl~~l~~~~~~g~l~~~i~~visn-~~~~--~~~A~~~gIp~~~~~~~~~~~~~~e~~~~~~l~~---~~~D 162 (280)
T TIGR00655 89 ILVSKEDHCLGDLLWRWYSGELDAEIALVISN-HEDL--RSLVERFGIPFHYIPATKDNRVEHEKRQLELLKQ---YQVD 162 (280)
T ss_pred EEEcCCChhHHHHHHHHHcCCCCcEEEEEEEc-ChhH--HHHHHHhCCCEEEcCCCCcchhhhHHHHHHHHHH---hCCC
Confidence 4444444555555554321 2344444433 3332 245888999998887543222222 345555654 3578
Q ss_pred EEEEEecCCCccccccHH
Q 017726 140 AICIVHNETATGVTNNLS 157 (367)
Q Consensus 140 lv~~~~~~n~tG~~~~~~ 157 (367)
++++.. .+.+.+-.
T Consensus 163 livlag----ym~il~~~ 176 (280)
T TIGR00655 163 LVVLAK----YMQILSPD 176 (280)
T ss_pred EEEEeC----chhhCCHH
Confidence 887764 34455533
No 476
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=37.31 E-value=3.4e+02 Score=25.15 Aligned_cols=88 Identities=10% Similarity=0.137 Sum_probs=51.4
Q ss_pred CCCeEEEEeCCcchH--H--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHH
Q 017726 83 PGDRIISFLIGQFSL--L--WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSK 158 (367)
Q Consensus 83 ~gd~vl~~~~~~~~~--~--~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~ 158 (367)
.|.+|.+.....+-. . +...++..|+++..+. +.+++.+.+.+. .+..+|++.++.-.....+.+.+
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~-------~~~~l~~~L~~~--~~~DlVLIDTaGr~~~~~~~l~e 275 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE-------SFKDLKEEITQS--KDFDLVLVDTIGKSPKDFMKLAE 275 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC-------cHHHHHHHHHHh--CCCCEEEEcCCCCCccCHHHHHH
Confidence 456666555544332 1 3344565666554332 456777766553 35688888887644433344667
Q ss_pred HHHHHHhc--CCCcEEEEeeeec
Q 017726 159 VRKLLDEY--RHPALFLVDGVSS 179 (367)
Q Consensus 159 i~~~~~~~--~~~~~vi~D~~~~ 179 (367)
+.++.+.. +..+++++|++..
T Consensus 276 l~~~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 276 MKELLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred HHHHHHhcCCCCeEEEEEcCCCC
Confidence 77776652 2357888888755
No 477
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=37.07 E-value=2.9e+02 Score=24.28 Aligned_cols=76 Identities=9% Similarity=-0.005 Sum_probs=46.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccC--CCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADT--AHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~--~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
..+.++..|+.-..+-.+.....+.+++.+...+-. .+...+++.. ....||..++.+.+.++++. .++.-+=|.
T Consensus 88 la~~a~~~Gad~v~v~~P~y~~~~~~~i~~yf~~v~~~~~~lpv~lYn-~P~~tg~~l~~~~i~~L~~~--pnv~giK~s 164 (290)
T TIGR00683 88 LGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGGLNMIVYS-IPFLTGVNMGIEQFGELYKN--PKVLGVKFT 164 (290)
T ss_pred HHHHHHHhCCCEEEEeCCcCCCCCHHHHHHHHHHHHhhCCCCCEEEEe-CccccccCcCHHHHHHHhcC--CCEEEEEeC
Confidence 446677788877766544444555555554433311 0122344333 33458999999999999965 678777775
Q ss_pred e
Q 017726 177 V 177 (367)
Q Consensus 177 ~ 177 (367)
+
T Consensus 165 ~ 165 (290)
T TIGR00683 165 A 165 (290)
T ss_pred C
Confidence 4
No 478
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=37.07 E-value=95 Score=23.58 Aligned_cols=56 Identities=18% Similarity=0.137 Sum_probs=37.7
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHH-HHHHHHHhc--CCCcEE-EEeeeec
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLS-KVRKLLDEY--RHPALF-LVDGVSS 179 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~-~i~~~~~~~--~~~~~v-i~D~~~~ 179 (367)
.+.+.|.+.+.+. ++..|++-.|-|..|..-+.. .+.+++++. ..++.| ++||-++
T Consensus 35 ~~~~~l~~~i~~~---~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 35 PDWSRIEELLKEW---TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHHc---CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3578899988874 578999999999999987733 233333331 145544 4888754
No 479
>PRK08462 biotin carboxylase; Validated
Probab=36.69 E-value=2.6e+02 Score=26.36 Aligned_cols=43 Identities=14% Similarity=0.152 Sum_probs=25.8
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEE
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi 173 (367)
.|.+.+.+++++ .++++|+-.. |..-....+.++|++ .|+.++
T Consensus 63 ~~~~~l~~~~~~---~~~D~i~pg~-----g~lse~~~~a~~~e~--~Gi~~~ 105 (445)
T PRK08462 63 LNIPAIISAAEI---FEADAIFPGY-----GFLSENQNFVEICSH--HNIKFI 105 (445)
T ss_pred CCHHHHHHHHHH---cCCCEEEECC-----CccccCHHHHHHHHH--CCCeEE
Confidence 467888888776 3456665432 322333556667776 777655
No 480
>PRK09212 pyruvate dehydrogenase subunit beta; Validated
Probab=36.60 E-value=1.5e+02 Score=26.74 Aligned_cols=25 Identities=8% Similarity=0.078 Sum_probs=17.3
Q ss_pred ccHHHHHHHHHhcCCCcEEEEeeeecc
Q 017726 154 NNLSKVRKLLDEYRHPALFLVDGVSSI 180 (367)
Q Consensus 154 ~~~~~i~~~~~~~~~~~~vi~D~~~~~ 180 (367)
+|.+.|.+.+++ .+.++++++.+..
T Consensus 241 ld~~~i~~~~~~--~~~vv~vEe~~~~ 265 (327)
T PRK09212 241 LDTETIIESVKK--TNRLVVVEEGWPF 265 (327)
T ss_pred CCHHHHHHHHHh--CCeEEEEcCCCCC
Confidence 566678888887 6667777766543
No 481
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=36.09 E-value=3e+02 Score=24.09 Aligned_cols=76 Identities=13% Similarity=0.097 Sum_probs=43.1
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
....++..|+.-..+-.+.....+.+++.+....-.. -...+++... ...||..++.+-+.++++. .++.-+=|.+
T Consensus 85 ~a~~a~~~Gad~v~v~pP~y~~~~~~~i~~~~~~i~~~~~~pi~lYn~-P~~tg~~l~~~~l~~L~~~--~~v~giK~s~ 161 (285)
T TIGR00674 85 LTKFAEDVGADGFLVVTPYYNKPTQEGLYQHFKAIAEEVDLPIILYNV-PSRTGVSLYPETVKRLAEE--PNIVAIKEAT 161 (285)
T ss_pred HHHHHHHcCCCEEEEcCCcCCCCCHHHHHHHHHHHHhcCCCCEEEEEC-cHHhcCCCCHHHHHHHHcC--CCEEEEEeCC
Confidence 3456677788766665444445555555444333110 0122333333 2357999999999999865 5666555654
No 482
>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional
Probab=35.83 E-value=3.1e+02 Score=25.02 Aligned_cols=63 Identities=8% Similarity=0.054 Sum_probs=33.0
Q ss_pred HHHHHHHhCCceEEEeCCCC-----CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHH
Q 017726 99 WIDQQQRLNFNVDVVESDWG-----EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLD 164 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~-----~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~ 164 (367)
+..+.+..++.+..++.... ..+++++..++... -+++.++.+|-..-+....+.+++.++++
T Consensus 234 ~~~i~~~~~iDvall~iG~~p~~~~~hm~p~ea~~~a~~---l~ak~vIpiH~dtf~~~~~dp~~~~~~~~ 301 (355)
T PRK11709 234 FAKHGNDHQIDVALGSYGENPRGITDKMTSIDILRMAES---LNAKVVIPVHHDIWSNFQADPQEILVLWK 301 (355)
T ss_pred HHHHHhcCCCCEEEecCCCCCCCCcCCCCHHHHHHHHHH---cCCCEEEEEChhhccccccCHHHHHHHHH
Confidence 33444445566666655321 13566666555554 24566666665444444445555555554
No 483
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=35.72 E-value=2.6e+02 Score=23.31 Aligned_cols=116 Identities=13% Similarity=0.022 Sum_probs=63.0
Q ss_pred eEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEE
Q 017726 62 PFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAI 141 (367)
Q Consensus 62 ~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv 141 (367)
.+++++||..|.-. +..+++.|..|.+..++. ........+..+++.. . ..++.+.+.. ..+|
T Consensus 14 ~VlvvGgG~va~rK-a~~ll~~ga~v~Vvs~~~-~~el~~~~~~~~i~~~--~----~~~~~~~~~~---------~~lv 76 (210)
T COG1648 14 KVLVVGGGSVALRK-ARLLLKAGADVTVVSPEF-EPELKALIEEGKIKWI--E----REFDAEDLDD---------AFLV 76 (210)
T ss_pred EEEEECCCHHHHHH-HHHHHhcCCEEEEEcCCc-cHHHHHHHHhcCcchh--h----cccChhhhcC---------ceEE
Confidence 47888999888876 345677888888888865 3333344444442222 1 2234444322 2455
Q ss_pred EEEecCCCccccccHHHHHHHHHhcCCCcEEE-Eeeee-ccCceeeccccccceEEEecCCC
Q 017726 142 CIVHNETATGVTNNLSKVRKLLDEYRHPALFL-VDGVS-SICAIDFRMDEWGIDVALTGSQK 201 (367)
Q Consensus 142 ~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi-~D~~~-~~~~~~~~~~~~~~d~~~~s~~K 201 (367)
++++. ...--+++.+.|++ +++++- +|... ....+|.-....+.-+.++|..|
T Consensus 77 iaAt~-----d~~ln~~i~~~a~~--~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G~ 131 (210)
T COG1648 77 IAATD-----DEELNERIAKAARE--RRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGGK 131 (210)
T ss_pred EEeCC-----CHHHHHHHHHHHHH--hCCceeccCCcccCceecceeeccCCeEEEEECCCC
Confidence 55542 22235679999999 777654 45432 22233333333344555555444
No 484
>PF11823 DUF3343: Protein of unknown function (DUF3343); InterPro: IPR021778 This family of proteins are functionally uncharacterised. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.
Probab=35.56 E-value=1.3e+02 Score=19.90 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=20.7
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCC
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDW 117 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 117 (367)
-+++....+....+.+.++..|++.+.+|++.
T Consensus 4 ~~i~F~st~~a~~~ek~lk~~gi~~~liP~P~ 35 (73)
T PF11823_consen 4 YLITFPSTHDAMKAEKLLKKNGIPVRLIPTPR 35 (73)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCcEEEeCCCh
Confidence 35555555555556677777788777777654
No 485
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=35.12 E-value=1.4e+02 Score=22.20 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 120 GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 120 ~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
.++++++++.++. ++.+|++-+. .+|......++.+.+++ .|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~----~peivliGTG--~~~~~~~~~~~~~~l~~--~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE----GVEVIVIGTG--QSGALKVPPETVEKLEK--RGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc----CCCEEEEcCC--CCccccCCHHHHHHHHh--cCCEEEEcCh
Confidence 4789999999984 4577777643 34444456777778888 8888776443
No 486
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=35.01 E-value=1.5e+02 Score=21.78 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=37.3
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEe
Q 017726 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175 (367)
Q Consensus 119 ~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D 175 (367)
..+++|+++..+.+ ++..|++-+. -+|.+.=.++..+++++ .++-|++-
T Consensus 47 Hkl~~eEle~~lee----~~E~ivvGTG--~~G~l~l~~ea~e~~r~--k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE----GPEVIVVGTG--QSGMLELSEEAREFFRK--KGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc----CCcEEEEecC--ceeEEEeCHHHHHHHHh--cCCeEEEe
Confidence 45789999999995 4567766554 47888777888899998 78776664
No 487
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=34.81 E-value=4.1e+02 Score=25.27 Aligned_cols=62 Identities=18% Similarity=0.068 Sum_probs=35.2
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcc--ccccHHHHHHHHHhcCCCcEEEEee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATG--VTNNLSKVRKLLDEYRHPALFLVDG 176 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG--~~~~~~~i~~~~~~~~~~~~vi~D~ 176 (367)
....++..|.+...+..+. +++.+.+.+ ++... .+|.. ...+...+.+.+++ +|+.++.++
T Consensus 301 A~~vA~~lg~~~~~i~~~~------~~~~~~~~~-------~v~~~--~~p~~~~~~~~~~~l~~~a~~--~G~~vlltG 363 (467)
T TIGR01536 301 ARKVADHLGTEHHEVLFSV------EEGLDALPE-------VIYHL--EDPTTIRASIPLYLLSKLARE--DGVKVVLSG 363 (467)
T ss_pred HHHHHHHhCCcCeEEECCH------HHHHHHHHH-------HHHhh--CCCCCCchHHHHHHHHHHHHh--cCCEEEEec
Confidence 4567888999988887653 333333321 11111 12222 22355567788888 888888764
Q ss_pred e
Q 017726 177 V 177 (367)
Q Consensus 177 ~ 177 (367)
.
T Consensus 364 ~ 364 (467)
T TIGR01536 364 E 364 (467)
T ss_pred C
Confidence 4
No 488
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=34.79 E-value=2.8e+02 Score=23.40 Aligned_cols=98 Identities=10% Similarity=0.077 Sum_probs=55.8
Q ss_pred EEecCChhHHHHHHHHccCCCCCeEE--EEeCC---cch-H-----HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHh
Q 017726 63 FLIPTTGTGAWESALTNTLSPGDRII--SFLIG---QFS-L-----LWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131 (367)
Q Consensus 63 v~~~~ggt~al~~~~~~~~~~gd~vl--~~~~~---~~~-~-----~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~ 131 (367)
++..+||-++..++..+..+ .+.+. +..|. .+. + ....+++.+|+++..++......--.+++.+++.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 45668888888777766544 33222 12221 111 1 1346788899998877654333223567777776
Q ss_pred ccCCCCccEEEEEecCCCcccccc---HHHHHHHHHhcCCCcEEE
Q 017726 132 ADTAHTIKAICIVHNETATGVTNN---LSKVRKLLDEYRHPALFL 173 (367)
Q Consensus 132 ~~~~~~~~lv~~~~~~n~tG~~~~---~~~i~~~~~~~~~~~~vi 173 (367)
+. +...++ +|.+.. ...+.++|.+ -|+..+
T Consensus 83 ~~---gv~~vv-------~GdI~s~~qr~~~e~v~~~--lgl~~~ 115 (223)
T TIGR00290 83 TL---DVEAVV-------FGAIYSEYQKTRIERVCRE--LGLKSF 115 (223)
T ss_pred Hc---CCCEEE-------ECCcccHHHHHHHHHHHHh--cCCEEe
Confidence 42 233443 576653 4567888888 666543
No 489
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=34.76 E-value=2.4e+02 Score=22.66 Aligned_cols=120 Identities=14% Similarity=0.054 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHHHHHhcCCCCceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHH-------------
Q 017726 39 AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQR------------- 105 (367)
Q Consensus 39 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~------------- 105 (367)
++.....+.-+.+.+..+.+..+--.+.-|+|.+.++++.. +|.+|.+.....|.... .....
T Consensus 34 d~~~gi~~al~~l~~~~~~~~~~i~~v~~gTT~~tNAl~e~---~g~~v~li~~~G~~d~l-~~~~~~~~~~~~~~~~lv 109 (176)
T PF05378_consen 34 DPAEGILEALDALLEESGIDPSDIDRVRHGTTVATNALLER---KGARVGLITTGGFGDVL-EIGRQWRPDLFDLQDPLV 109 (176)
T ss_pred CHHHHHHHHHHhhhcccCCChhhCcEEEeccHHHHHHHHhc---cCCCceEEeccCcHhhc-chhhccCCcccccccccc
Confidence 33344444444444444444333235556778999988865 33444333332233211 11110
Q ss_pred hCCceEEEeC--CCCC----CCCHHHHHHHHhccCCCCccEEEEEecCCCcccccc--HHHHHHHHHh
Q 017726 106 LNFNVDVVES--DWGE----GAKLDVLASKLAADTAHTIKAICIVHNETATGVTNN--LSKVRKLLDE 165 (367)
Q Consensus 106 ~g~~~~~v~~--~~~~----~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~--~~~i~~~~~~ 165 (367)
..-.+..+.- +.++ .+|.+++++.+.+......+.|.++..+++. .| -.++.+++++
T Consensus 110 ~~~~~~~v~gr~~~~G~~i~~ld~~~v~~~~~~l~~~gv~avAV~~~fS~~---np~hE~~v~eii~e 174 (176)
T PF05378_consen 110 PRERVFEVDGRIDADGEVIEPLDEDEVREALRELKDKGVEAVAVSLLFSYR---NPEHEQRVAEIIRE 174 (176)
T ss_pred cccCEEEECCccccCcEEecCCCHHHHHHHHHHHHhCCCCEEEEECccCCC---CHHHHHHHHHHHHh
Confidence 0112222321 1122 3577888888776432446777777654332 44 3346677666
No 490
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=34.56 E-value=1.5e+02 Score=24.18 Aligned_cols=72 Identities=17% Similarity=0.140 Sum_probs=42.9
Q ss_pred CCHHHHHHHHhccCCCCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeeeeccCceeeccccccceEEEecCC
Q 017726 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEWGIDVALTGSQ 200 (367)
Q Consensus 121 ~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~~~~~~~~~~~~~~~~d~~~~s~~ 200 (367)
++++++.++++. ...+|.+..-.-+-- .+++++.+-+|+ ...+++-|.+.---. ....+.|+|++..+++
T Consensus 52 PT~~ev~~l~~a----GadIIAlDaT~R~Rp--~~l~~li~~i~~--~~~l~MADist~ee~--~~A~~~G~D~I~TTLs 121 (192)
T PF04131_consen 52 PTLKEVDALAEA----GADIIALDATDRPRP--ETLEELIREIKE--KYQLVMADISTLEEA--INAAELGFDIIGTTLS 121 (192)
T ss_dssp -SHHHHHHHHHC----T-SEEEEE-SSSS-S--S-HHHHHHHHHH--CTSEEEEE-SSHHHH--HHHHHTT-SEEE-TTT
T ss_pred CCHHHHHHHHHc----CCCEEEEecCCCCCC--cCHHHHHHHHHH--hCcEEeeecCCHHHH--HHHHHcCCCEEEcccc
Confidence 467899999884 567887775332222 678888888888 669999997632111 1223458999988755
Q ss_pred Cc
Q 017726 201 KA 202 (367)
Q Consensus 201 K~ 202 (367)
-+
T Consensus 122 GY 123 (192)
T PF04131_consen 122 GY 123 (192)
T ss_dssp TS
T ss_pred cC
Confidence 43
No 491
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=34.44 E-value=3.1e+02 Score=23.86 Aligned_cols=61 Identities=13% Similarity=0.016 Sum_probs=38.2
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEec
Q 017726 82 SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHN 146 (367)
Q Consensus 82 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~ 146 (367)
..|-.|.......... +....+..|.++..++-+.++.-|.+++.+.+++ .+++++++.+.
T Consensus 29 ~~g~~v~f~~~~~~~~-~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~---~~~d~vV~D~y 89 (279)
T TIGR03590 29 AQGAEVAFACKPLPGD-LIDLLLSAGFPVYELPDESSRYDDALELINLLEE---EKFDILIVDHY 89 (279)
T ss_pred HCCCEEEEEeCCCCHH-HHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHh---cCCCEEEEcCC
Confidence 4455555444433332 2345567888888887554444477788888875 35788888775
No 492
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=34.40 E-value=76 Score=25.24 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=26.2
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCC----CCHHHHHHHHhc--cCCCCccEEEEEecCCCccccc
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG----AKLDVLASKLAA--DTAHTIKAICIVHNETATGVTN 154 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~----~d~e~l~~~i~~--~~~~~~~lv~~~~~~n~tG~~~ 154 (367)
+|+...++..+......++..|+++..+++..... ++.+.+.++++- ++...|-+|.+.+....||.+.
T Consensus 35 TII~L~~e~~~~~~~~f~~~~~I~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~vv 109 (164)
T PF03162_consen 35 TIINLRPEPPSQDFLEFAEENGIKLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLVV 109 (164)
T ss_dssp EEEE--SS---HHHHHHHHHTT-EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHHH
T ss_pred eEEEecCCCCCHHHHHHHhhcCceEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhHH
Confidence 45555555444433446677777777777654322 344444443321 1112344554445556777653
No 493
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=34.18 E-value=84 Score=26.99 Aligned_cols=63 Identities=10% Similarity=-0.094 Sum_probs=40.8
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCC-CCHHHHHHHHhccCCCCccEEEEEecC
Q 017726 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG-AKLDVLASKLAADTAHTIKAICIVHNE 147 (367)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~e~l~~~i~~~~~~~~~lv~~~~~~ 147 (367)
.|.+|+++.|...+..+...++..|.++..+|+-.-.. -+.+.+...+.+. ...+.|+++++|
T Consensus 2 ~g~~vlvTRp~~~~~~l~~~l~~~G~~~~~~P~i~i~p~~~~~~~~~~l~~l--~~~d~iifTS~n 65 (255)
T PRK05752 2 SGWRLLLTRPAEECAALAASLAEAGIFSSSLPLLAIEPLPETPEQRALLLEL--DRYCAVIVVSKP 65 (255)
T ss_pred CCCEEEECCcHHHHHHHHHHHHHcCCCEEEcCcEEEeeCCCCHHHHHHHhcC--CCCCEEEEECHH
Confidence 36789999997777667777888999999887532111 1233444444432 245788888754
No 494
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=33.68 E-value=2.7e+02 Score=24.38 Aligned_cols=77 Identities=12% Similarity=0.027 Sum_probs=46.4
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCC-CCccEEEEEecCCCccccccHHHHHHHHHhcCCCcEEEEeee
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTA-HTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGV 177 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~-~~~~lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~D~~ 177 (367)
..+.++..|+.-..+-.+.....+.+++.+...+-.. ...-+++...| ..||..++.+.+.++++- .++.-+=|..
T Consensus 88 ~a~~a~~~Gad~v~v~~P~~~~~s~~~l~~y~~~ia~~~~~pi~iYn~P-~~tg~~ls~~~l~~L~~~--~nv~giK~s~ 164 (289)
T PF00701_consen 88 LARHAQDAGADAVLVIPPYYFKPSQEELIDYFRAIADATDLPIIIYNNP-ARTGNDLSPETLARLAKI--PNVVGIKDSS 164 (289)
T ss_dssp HHHHHHHTT-SEEEEEESTSSSCCHHHHHHHHHHHHHHSSSEEEEEEBH-HHHSSTSHHHHHHHHHTS--TTEEEEEESS
T ss_pred HHHHHhhcCceEEEEeccccccchhhHHHHHHHHHHhhcCCCEEEEECC-CccccCCCHHHHHHHhcC--CcEEEEEcCc
Confidence 4566777888876655454555666655544433110 11233333332 257889999999999985 7888777755
Q ss_pred e
Q 017726 178 S 178 (367)
Q Consensus 178 ~ 178 (367)
.
T Consensus 165 ~ 165 (289)
T PF00701_consen 165 G 165 (289)
T ss_dssp S
T ss_pred h
Confidence 3
No 495
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.54 E-value=2.1e+02 Score=23.69 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=51.7
Q ss_pred eEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCccccccH-HHHHHHHH
Q 017726 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNL-SKVRKLLD 164 (367)
Q Consensus 86 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~~~-~~i~~~~~ 164 (367)
.+.+..+..-+.......+.+|+..+.=..+.++.--+-++...+++. +- +..+|..|-|-+..+ +.+..+++
T Consensus 70 ~~amvS~s~DGEliA~~l~kfG~~~IRGSs~Kgg~~Alr~l~k~Lk~G-----~~-i~itpDgPkGp~~~~~~Gii~LA~ 143 (214)
T COG2121 70 IYAMVSPSRDGELIARLLEKFGLRVIRGSSNKGGISALRALLKALKQG-----KS-IAITPDGPKGPVHKIGDGIIALAQ 143 (214)
T ss_pred EEEEEcCCcCHHHHHHHHHHcCceEEeccCCcchHHHHHHHHHHHhCC-----Cc-EEEcCCCCCCCceeccchhhHhhH
Confidence 344444433334466788999999888777665533344455555532 23 344578899988865 45999999
Q ss_pred hcCCCcEEEE
Q 017726 165 EYRHPALFLV 174 (367)
Q Consensus 165 ~~~~~~~vi~ 174 (367)
+ .|+.++-
T Consensus 144 ~--sg~pi~p 151 (214)
T COG2121 144 K--SGVPIIP 151 (214)
T ss_pred h--cCCCeEE
Confidence 9 7877663
No 496
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=33.51 E-value=3.7e+02 Score=24.71 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=45.0
Q ss_pred ceEEecCChhHHHHHHHHccCCCCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccE
Q 017726 61 TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKA 140 (367)
Q Consensus 61 ~~v~~~~ggt~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~l 140 (367)
+.++-.++|..+.-++..+-. .|=++.+..|...+..-....+.+|++++.++...+..-..+...+..++ ++..
T Consensus 112 ~~vV~aSsGN~G~alA~~a~~-~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~----~~~~ 186 (368)
T PLN02556 112 TTLIEPTSGNMGISLAFMAAM-KGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLES----TPDA 186 (368)
T ss_pred CEEEEeCCchHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHh----cCCC
Confidence 346767777777776665522 23334444454444333466788999999886432211123444444442 2244
Q ss_pred EEEEecCCCcc
Q 017726 141 ICIVHNETATG 151 (367)
Q Consensus 141 v~~~~~~n~tG 151 (367)
+++..-+||.+
T Consensus 187 ~~~~q~~np~~ 197 (368)
T PLN02556 187 FMLQQFSNPAN 197 (368)
T ss_pred CccCCCCCHHH
Confidence 44443445544
No 497
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=33.39 E-value=2.3e+02 Score=24.85 Aligned_cols=67 Identities=10% Similarity=0.085 Sum_probs=38.6
Q ss_pred EEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecCCCcccc---ccHHHHHHHHHhcCCCcEEEEeeeecc
Q 017726 111 DVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVT---NNLSKVRKLLDEYRHPALFLVDGVSSI 180 (367)
Q Consensus 111 ~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~---~~~~~i~~~~~~~~~~~~vi~D~~~~~ 180 (367)
+.|.+......+++++..+++.-.....+=|++|.-....|.- .|+..+-.+ ++ .+.+||+|.+|+.
T Consensus 131 kpV~lKkGq~~t~~e~~~aaeki~~~GN~~viLcERG~tFgy~~lv~D~r~ip~m-k~--~~lPVI~DpSHsv 200 (290)
T PLN03033 131 KIINIKKGQFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM-RE--ANCPVVADITHSL 200 (290)
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-Hh--cCCCEEEeCCccc
Confidence 3444444445677776655544111122344555444444543 577776655 45 7899999999985
No 498
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.19 E-value=1.8e+02 Score=20.58 Aligned_cols=62 Identities=11% Similarity=0.100 Sum_probs=40.6
Q ss_pred HHHHHHHhCCceEEEeCCCCCCCCH--HHHHHHHhccCCCCccEEEEEecCCCccccc--cHHHHHHHHHhcCCCcEEEE
Q 017726 99 WIDQQQRLNFNVDVVESDWGEGAKL--DVLASKLAADTAHTIKAICIVHNETATGVTN--NLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 99 ~~~~~~~~g~~~~~v~~~~~~~~d~--e~l~~~i~~~~~~~~~lv~~~~~~n~tG~~~--~~~~i~~~~~~~~~~~~vi~ 174 (367)
+...++..|.+.... -. ++.... ..++..+. ++++|++.+ +.+- -...+.+.|++ ++++++.
T Consensus 15 ~~~~~~~~G~~~~~h-g~-~~~~~~~~~~l~~~i~-----~aD~VIv~t-----~~vsH~~~~~vk~~akk--~~ip~~~ 80 (97)
T PF10087_consen 15 YKRILEKYGGKLIHH-GR-DGGDEKKASRLPSKIK-----KADLVIVFT-----DYVSHNAMWKVKKAAKK--YGIPIIY 80 (97)
T ss_pred HHHHHHHcCCEEEEE-ec-CCCCccchhHHHHhcC-----CCCEEEEEe-----CCcChHHHHHHHHHHHH--cCCcEEE
Confidence 556778899998888 22 222222 34777775 568887764 3332 36678889999 8888764
No 499
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=33.08 E-value=3.6e+02 Score=24.57 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=42.8
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhccCCCCccEEEEEecC-CCccccccHHHHHH
Q 017726 83 PGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAADTAHTIKAICIVHNE-TATGVTNNLSKVRK 161 (367)
Q Consensus 83 ~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~e~l~~~i~~~~~~~~~lv~~~~~~-n~tG~~~~~~~i~~ 161 (367)
++.+|++.+.+.=.+.. ......|+++..||.+. +++++.+. +|+.|++++.. +|.-.-.-++.+.+
T Consensus 178 ~~~~Vv~iD~GvK~nIl-r~L~~rg~~vtVVP~~t----~~eeIl~~-------~pDGiflSNGPGDP~~~~~~i~~ik~ 245 (368)
T COG0505 178 PGKHVVVIDFGVKRNIL-RELVKRGCRVTVVPADT----SAEEILAL-------NPDGIFLSNGPGDPAPLDYAIETIKE 245 (368)
T ss_pred CCcEEEEEEcCccHHHH-HHHHHCCCeEEEEcCCC----CHHHHHhh-------CCCEEEEeCCCCChhHHHHHHHHHHH
Confidence 35578877775443333 44455799999999763 46665443 56889888643 55333333555555
Q ss_pred HHHh
Q 017726 162 LLDE 165 (367)
Q Consensus 162 ~~~~ 165 (367)
+...
T Consensus 246 l~~~ 249 (368)
T COG0505 246 LLGT 249 (368)
T ss_pred Hhcc
Confidence 5544
No 500
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=33.06 E-value=59 Score=26.72 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=28.1
Q ss_pred EEEEEecCCCccccccHHHHHHHHHhcCCCcEEEE
Q 017726 140 AICIVHNETATGVTNNLSKVRKLLDEYRHPALFLV 174 (367)
Q Consensus 140 lv~~~~~~n~tG~~~~~~~i~~~~~~~~~~~~vi~ 174 (367)
..++|-.-|+.|......++.+++++ ||+.++.
T Consensus 158 a~VicEi~~~dG~mar~~~~~~fa~~--h~l~~it 190 (203)
T COG0108 158 AGVICEIMNDDGTMARLPELEEFAKE--HGLPVIT 190 (203)
T ss_pred cEEEEEEeCCCccccChHHHHHHHHH--cCCcEEE
Confidence 45667777889999999999999999 9998773
Done!