RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 017726
(367 letters)
>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate
aminotransferase {Thermus thermophilus [TaxId: 274]}
Length = 348
Score = 187 bits (474), Expect = 7e-57
Identities = 78/349 (22%), Positives = 149/349 (42%), Gaps = 17/349 (4%)
Query: 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTG 69
+ L PGPV + + + A+ R +R+ A + +++ F+T G ++ +G
Sbjct: 1 DWLLTPGPVRLHPKALEALARPQLHHRTEAAREVFLKARGLLREAFRT-EGEVLILTGSG 59
Query: 70 TGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASK 129
T A E+ + N +PG+R++ + G+FS + + V+ ++ +G+ + +
Sbjct: 60 TLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTPRPED---- 115
Query: 130 LAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDE 189
+ +VH+ET+TG +L + + E L D V+S+ + ++
Sbjct: 116 ---VAKEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEA 172
Query: 190 WGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPY 249
G+D A +GSQK L P G+G V SP+ALE K K +
Sbjct: 173 MGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEG----ESAW 228
Query: 250 TPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVT 309
TP+I L+ + A L+ + E++ + + + E + FS V
Sbjct: 229 TPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEGG----LRPVPKRFSPAVA 284
Query: 310 AVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNEVM 358
A +P + + V+ A+ + + G + GKVFR+ +G +
Sbjct: 285 AFYLPEGVPYAR-VKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYE 332
>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase
{Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}
Length = 388
Score = 175 bits (443), Expect = 6e-52
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 10/361 (2%)
Query: 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG 60
+ + + PGP + +V+ AM + + + ++ IF+T +
Sbjct: 9 LRNPLIIPEKIMMGPGPSNCSKRVLTAMTNTVLSNFHAELFRTMDEVKDGLRYIFQTENR 68
Query: 61 TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120
+ + E+ L+N L GDR++ + G ++ ++ +R +V +E
Sbjct: 69 ATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRP 128
Query: 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180
L+ LA A H K + + H ++++G+ L V + ++H L +VD V+S+
Sbjct: 129 FSLETLAR---AIELHQPKCLFLTHGDSSSGLLQPLEGVGQ--ICHQHDCLLIVDAVASL 183
Query: 181 CAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDW-----K 235
C + F MD+W ID TG+QK L P G+ + SPKAL+ + ++ F W
Sbjct: 184 CGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLG 243
Query: 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295
+Y Y+ + +T + L++ LR AL I EEGLEN I+R + + GL
Sbjct: 244 NYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGLD 303
Query: 296 NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355
+ TVT +++P ++ ++ + A ++L + GL GK +R+G +G +
Sbjct: 304 IFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS 363
Query: 356 E 356
Sbjct: 364 T 364
>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 382
Score = 163 bits (412), Expect = 2e-47
Identities = 85/363 (23%), Positives = 159/363 (43%), Gaps = 23/363 (6%)
Query: 10 NHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGT---PFLIP 66
+ L +PGP+ + V +A++ + + SP ++ + +L++ + +FK+ + + PF++
Sbjct: 4 DTLLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLA 63
Query: 67 TTGTGAWESALTNTL---SPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKL 123
+GT W+ +N + +P ++ G FS + D + VDVV +
Sbjct: 64 GSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVP 123
Query: 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI 183
+ ++ A+ + H +T+T V ++L + + + + F+VD V SI
Sbjct: 124 LE--LITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE 181
Query: 184 DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEA-------SKTAKSVRVFFDWKD 236
+F DEWG+D ALT SQKA+ P G+ I S + ++ W
Sbjct: 182 EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTP 241
Query: 237 YIKFYNLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWG-- 293
++ Y G + TP +QL+ L AL I EEGL + HR + + ++
Sbjct: 242 IMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQL 301
Query: 294 LKNCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNK-VAGKVFRIGHLG 352
+ +TAV V + V + + + + G++K + K RIGH+G
Sbjct: 302 TSVSRYPSNMSAHGLTAVYVADPPD----VIAFLKSHGVVIAGGIHKDIGPKYIRIGHMG 357
Query: 353 HLN 355
Sbjct: 358 VTA 360
>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 157 bits (396), Expect = 4e-45
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 11/360 (3%)
Query: 1 MDYMYAPGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG 60
+ + P L PGP ++P +++ A S + + + E I+ +F+T +
Sbjct: 12 LKPLSIP-NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNP 70
Query: 61 TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEG 120
+I +G A E+AL N L PGD + G + +D +R+ V + D G
Sbjct: 71 LTLVISGSGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGH 130
Query: 121 AKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSI 180
L + H + + H E++TGV L +L Y+ LVD V+S+
Sbjct: 131 YTLQEVE---EGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCL--LLVDSVASL 185
Query: 181 CAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK----- 235
MD GID+ +GSQKAL+ P G ++ S KA + + K+ F
Sbjct: 186 GGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLA 245
Query: 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295
++ + + +T + LY LR +L LI E+GLEN +HR ++A GL+
Sbjct: 246 NFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQ 305
Query: 296 NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355
+ TVT V VP+ + +IV +++ + GL GKV RIG LG
Sbjct: 306 LFVKDPALRLPTVTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNA 365
>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase
{Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}
Length = 377
Score = 154 bits (389), Expect = 4e-44
Identities = 101/351 (28%), Positives = 167/351 (47%), Gaps = 8/351 (2%)
Query: 7 PGKNHLFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSGTPFLIP 66
L PGP + V++AMN + + PA AL + ++ +++T + +
Sbjct: 16 VPSRLLLGPGPSNAHPSVLQAMNVSPVGHLDPAFLALMDEIQSLLRYVWQTENPLTIAVS 75
Query: 67 TTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVL 126
TGT A E+ + N + PGD ++ + G F +D R +V + WGE L
Sbjct: 76 GTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEV---FSL 132
Query: 127 ASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFR 186
A H + +VH ET+TG L V +L E L LVD V+S+ +
Sbjct: 133 EELRTALETHRPAILALVHAETSTGARQPLEGVGELCRE--FGTLLLVDTVTSLGGVPIF 190
Query: 187 MDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKS--VRVFFDWKDYIKFYNLG 244
+D WG+D+A + SQK L G S +A+E + ++ + D K++
Sbjct: 191 LDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSE 250
Query: 245 TFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWF 304
+ +T I L Y LR AL LI +EGL N +RH++ + +E GL + +E+
Sbjct: 251 RVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVE-KEYR 309
Query: 305 SDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLN 355
T+T V +P ++ + RR +N+ +G GL ++AGKV+R+G +G +
Sbjct: 310 LPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNS 360
>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase
{Salmonella typhimurium [TaxId: 90371]}
Length = 361
Score = 137 bits (345), Expect = 5e-38
Identities = 70/351 (19%), Positives = 133/351 (37%), Gaps = 11/351 (3%)
Query: 12 LFVPGPVHIPDQVIRAMNRNNEDYRSPAVPALTKTLLEDIKKIFKTTSG-TPFLIPTTGT 70
L PGP+ V AM ++ + + + + + + + + G T L+ +G+
Sbjct: 3 LLTPGPLTTSRTVKEAMLFDSCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGS 62
Query: 71 GAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKL 130
A E+ L + L P D+++ G + ++ + + + DV A
Sbjct: 63 YAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVA--RPDVQAIDA 120
Query: 131 AADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAIDFRMDEW 190
+ TI I +VH+ET TG+ N + +V +R+ ++VD +SS I +
Sbjct: 121 ILNADPTISHIAMVHSETTTGMLNPIDEVGA--LAHRYGKTYIVDAMSSFGGIPMDIAAL 178
Query: 191 GIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNLGTFWPYT 250
ID ++ + K + G V A + L A K + + + W +T
Sbjct: 179 HIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFT 238
Query: 251 PSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTA 310
+ AL + +EG + + + + +A N +E S +TA
Sbjct: 239 SPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITA 298
Query: 311 VIVPSH--INSSEIVRRAWQR-YNLSLGLGLNKVAGKVFRIGHLGHLNEVM 358
P SE RR ++ + + G FRIG++G +
Sbjct: 299 FYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS---QSDCFRIGNIGEVYAAD 346
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Escherichia coli [TaxId: 562]}
Length = 360
Score = 87.5 bits (215), Expect = 8e-20
Identities = 39/352 (11%), Positives = 96/352 (27%), Gaps = 30/352 (8%)
Query: 11 HLFVPGPVHIPDQVIRAMNRNNEDY------------RSPAVPALTKTLLEDIKKIFKTT 58
F GP +P +V++ + D+ R + + +D + +
Sbjct: 3 FNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVP 62
Query: 59 SGTPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWG 118
S L G +A+ + ++ + ++ + +V ++
Sbjct: 63 SNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVT 122
Query: 119 EGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVS 178
L + + + NET G+ ++ + D S
Sbjct: 123 VDG-LRAVKPMREWQLSDNAAYMHYCPNETIDGIAI------DETPDFGADVVVAADFSS 175
Query: 179 SICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYI 238
+I + + +G+ A G+QK + ++ K+ DY
Sbjct: 176 TILSRPIDVSRYGVIYA--GAQKNIGPAGLTIVIVRED------LLGKANIACPSILDYS 227
Query: 239 KFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCT 298
+ G+ + P+ L G+ + + +++ + ++
Sbjct: 228 ILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRND 287
Query: 299 QKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGH 350
+ S + + + L G V G R
Sbjct: 288 VAKRNRSRMNVPFQLADSALDKLFLEES-FAAGLHALKGHRVVGG--MRASI 336
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
{Bacillus alcalophilus [TaxId: 1445]}
Length = 360
Score = 82.8 bits (203), Expect = 3e-18
Identities = 31/334 (9%), Positives = 95/334 (28%), Gaps = 30/334 (8%)
Query: 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY------------RSPAVPALTKTLLEDIKKIFK 56
+ F GP +P + + ++ RS + + + ++++ +
Sbjct: 3 QVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQ 62
Query: 57 TTSG-TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115
+ + + + N L+ G L G +S + + + L +
Sbjct: 63 IPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAAST 122
Query: 116 DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175
+ + + + + T ++ + + + A + D
Sbjct: 123 KANSYQSIPDFSEFQLNENDA--------YLHITSNNTIYGTQYQNFPE--INHAPLIAD 172
Query: 176 GVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235
S I + +++++G+ A G+QK L ++ + ++ +
Sbjct: 173 MSSDILSRPLKVNQFGMIYA--GAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHI 230
Query: 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295
YN + +L + + E+ G
Sbjct: 231 KSDSLYNTPPTFSIYMLRNVLDW-----IKDLGGAEAIAKQNEEKAKIIYDTIDESNGFY 285
Query: 296 NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQR 329
++ S + + + + + +A ++
Sbjct: 286 VGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQ 319
>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
{Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
Length = 361
Score = 82.0 bits (201), Expect = 5e-18
Identities = 47/375 (12%), Positives = 92/375 (24%), Gaps = 41/375 (10%)
Query: 9 KNHLFVPGPVHIPDQVIRAMNRNNEDY------------RSPAVPALTKTLLEDIKKIFK 56
+ + F GP +P +V+ DY R A+ + +
Sbjct: 3 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLG 62
Query: 57 TTSG-TPFLIPTTGTGAWESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVES 115
+G I + + N L G + G ++ + + + + S
Sbjct: 63 NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASS 122
Query: 116 DWGEGAKLDVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD 175
+ L L + + NET G + +
Sbjct: 123 EASNYMTLPKLQ---EIQLQDNAAYLHLTSNETIEGAQ---------FKAFPDTGSVPLI 170
Query: 176 GVSSICAIDFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWK 235
G S + D + G+QK L ++ E+ K ++ + +
Sbjct: 171 GDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYV 230
Query: 236 DYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLK 295
YN + ++ ++ G
Sbjct: 231 KNNSLYNTPPSFGIYM-----VNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFY 285
Query: 296 NCTQKEEWFSDTVTAVIVPSHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGH-- 353
+ SD + S E V+ + Q G V G R
Sbjct: 286 RGCVDVDSRSDMNITFRLASEELEKEFVKASEQE-GFVGLKGHRSVGG--LRASIYNAVP 342
Query: 354 ------LNEVMFNFQ 362
L + M +F+
Sbjct: 343 YESCEALVQFMEHFK 357
>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase
{Escherichia coli [TaxId: 562]}
Length = 405
Score = 59.2 bits (142), Expect = 3e-10
Identities = 53/303 (17%), Positives = 95/303 (31%), Gaps = 27/303 (8%)
Query: 20 IPDQVIRAMNR-NNEDYRSP-----AVPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW 73
P QVI A Y + + A +E+++K
Sbjct: 34 KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGT 93
Query: 74 ESALTNTLS--------PGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKL 123
+ + GD II + + + W R+ + V+ + +L
Sbjct: 94 TEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQL 153
Query: 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI 183
+ L + T + + I H G N L+++ L + H A LVDG ++
Sbjct: 154 ETLPTLFDEKT----RLLAITHVSNVLGTENPLAEMITLAHQ--HGAKVLVDGAQAVMHH 207
Query: 184 DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVRVFFDWKDYIKFYNL 243
+ D + K PTG+GI+ L+ + +
Sbjct: 208 PVDVQALDCDFYVFSGHKLYG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTW 266
Query: 244 GT----FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQ 299
F TP+ + GL AAL+ + GL N+ E + L +E+
Sbjct: 267 TKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYG 326
Query: 300 KEE 302
+
Sbjct: 327 PQN 329
>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS
{Synechocystis sp. PCC 6803 [TaxId: 1148]}
Length = 408
Score = 44.2 bits (103), Expect = 1e-05
Identities = 58/280 (20%), Positives = 94/280 (33%), Gaps = 26/280 (9%)
Query: 20 IPDQVIRAMNRNNEDYRSPAVPAL------TKTLLED----IKKIFKTTSGTPFLIPTTG 69
P V+ + E+ + E + K S +
Sbjct: 34 KPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNA 93
Query: 70 TGA----WESALTNTLSPGDRIISFLIGQFSLL--WIDQQQRLNFNVDVVESDWGEGAKL 123
T A S N L GD II+ ++ S L W + + V+ D E L
Sbjct: 94 TEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDL 153
Query: 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI 183
+ + L+ T K + +VH G N ++ +L ++ A LVD S
Sbjct: 154 EHFKTLLSEKT----KLVTVVHISNTLGCVNPAEEIAQL--AHQAGAKVLVDACQSAPHY 207
Query: 184 DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKALEASK--TAKSVRVFFDWKDYIKFY 241
+ D L S + PTG+G + + LEA + + D+
Sbjct: 208 PLDVQLIDCDW-LVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTG 266
Query: 242 NLGT-FWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRR 280
L F TP+I L AA+D + + G+EN+
Sbjct: 267 ELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 306
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 38.0 bits (87), Expect = 0.001
Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 23/216 (10%)
Query: 20 IPDQVIRAMNRNNEDYRSPAVPA--------LTKTLLED----IKKIFKTTSGTPFLIPT 67
+ +V M + + PA + ++ I +
Sbjct: 14 VDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSG 73
Query: 68 TGTGAW---ESALTNTLSPGDRIISFLIGQFSLL-WIDQQQRLNFNVDVVESDWGEGAKL 123
+ A G II+ ++L Q +R F V + L
Sbjct: 74 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDL 133
Query: 124 DVLASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAI 183
L + + DT + I+H GV +++ + ++ ++ VD S+ +
Sbjct: 134 KELEAAMRDDT----ILVSIMHVNNEIGVVQDIAAIGEM--CRARGIIYHVDATQSVGKL 187
Query: 184 DFRMDEWGIDVALTGSQKALSLPTGMGIVCASPKAL 219
+ + +D+ K G+G + K
Sbjct: 188 PIDLSQLKVDLMSFSGHKIYGPK-GIGALYVRRKPR 222
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 37.1 bits (85), Expect = 0.002
Identities = 26/204 (12%), Positives = 59/204 (28%), Gaps = 16/204 (7%)
Query: 15 PGPVHIPDQVIRAMNRNNEDYRSPA-VPALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAW 73
P HI + A+++ Y + L + + E +KK + I
Sbjct: 38 DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQ 97
Query: 74 ESALTNT--LSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLA 131
+ + L G+ ++ S + V + + +L+V L
Sbjct: 98 AFLMGLSAFLKDGEEVLIPTPAFVS--YAPAVILAGGKPVEVPTYEEDEFRLNVDE--LK 153
Query: 132 ADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVD---------GVSSICA 182
+A+ I TG + ++ D L ++ + +
Sbjct: 154 KYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYS 213
Query: 183 IDFRMDEWGIDVALTGSQKALSLP 206
I + + + G K ++
Sbjct: 214 IASLDGMFERTITVNGFSKTFAMT 237
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 36.3 bits (83), Expect = 0.004
Identities = 31/220 (14%), Positives = 68/220 (30%), Gaps = 17/220 (7%)
Query: 15 PGPVHIPDQVIRAMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPTTG-TGA 72
P HI + A+ + Y + P L + + + +++ G ++ T G +
Sbjct: 43 NTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQS 102
Query: 73 WESALTNTLSPGDRIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVLASKLAA 132
+ + + PGD +I S + + + + + + +
Sbjct: 103 IFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP 162
Query: 133 DTAHTIKAICIVHNETATGVTNNL----------SKVRKLLDEYRHPALFLVDGVSSICA 182
T + N T T + + + L DE L+ SI A
Sbjct: 163 KTKLLV--FNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGA 220
Query: 183 IDFRMDEWGIDVALTGSQKALSLP-TGMGIVCASPKALEA 221
E + +G K ++ +G + ++A
Sbjct: 221 ASPEAYERSVV--CSGFAKTYAMTGWRVGFLAGPVPLVKA 258
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 28.8 bits (63), Expect = 1.3
Identities = 43/295 (14%), Positives = 81/295 (27%), Gaps = 57/295 (19%)
Query: 27 AMNRNNEDY-RSPAVPALTKTLLEDIKKIFKTTSGTPFLIPT-TGTGAWESALTNTLSPG 84
AM +E Y S L + K++F ++IP G GA L
Sbjct: 63 AMITGDEAYAGSRNYYDL----KDKAKELF----NYDYIIPAHQGRGAENILFPVLLKYK 114
Query: 85 DRII------------------SFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLDVL 126
+ + + I ++ + + KL
Sbjct: 115 QKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKEN 174
Query: 127 ASKLAADTAHTIKAICIVHNETATGVT-NNLSKVRKLLDEYRHPALFLVDGVSSICAIDF 185
++ AD I + ++ V+ +NL +V ++ + H ++D F
Sbjct: 175 IAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQ--HGIFVVMDSARFCENAYF 232
Query: 186 RM----------------DEWGIDVALTGSQKALSLPTGMGIVCASPKALEASKTAKSVR 229
D + ALT S K L G+V +
Sbjct: 233 IKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVA----------IRDNEE 282
Query: 230 VFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKA 284
+F + + + ++ + EE L I + + LG
Sbjct: 283 IFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDR 337
>d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein
BC3205 {Bacillus cereus [TaxId: 1396]}
Length = 413
Score = 28.4 bits (63), Expect = 1.7
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 11/39 (28%)
Query: 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124
R++ +L+ + F +E DWG G KL+
Sbjct: 63 RLVKYLV-----------TEMGFTNFAMEEDWGNGLKLN 90
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco
(Nicotiana tabacum) [TaxId: 4097]}
Length = 275
Score = 27.8 bits (61), Expect = 1.9
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Query: 41 PALTKTLLEDIKKIFKTTSGTPFLIPTTGTGAWESALT 78
A K+ EDIK++ KT P ++ W A T
Sbjct: 5 SAQLKSAREDIKELLKTKFCHPIMVRL----GWHDAGT 38
>d3b55a1 c.150.1.3 (A:40-442) Succinoglycan biosynthesis protein
BC3120 {Bacillus cereus [TaxId: 1396]}
Length = 403
Score = 28.0 bits (62), Expect = 2.1
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 11/39 (28%)
Query: 86 RIISFLIGQFSLLWIDQQQRLNFNVDVVESDWGEGAKLD 124
RI+ +L+ F V+E W +LD
Sbjct: 57 RIVKYLV-----------SEKGFTNLVLEEGWDRALELD 84
>d4bcla_ b.75.1.1 (A:) Bacteriochlorophyll A protein
{Prosthecochloris aestuarii, strain 2k [TaxId: 1102]}
Length = 359
Score = 28.0 bits (62), Expect = 2.1
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 28/148 (18%)
Query: 68 TGTGAWESALTNTLSPGDRIISF-LIG-QFSLLWIDQQQRLNFNVDVVESDWGEGAKLDV 125
T G +S + GD I F IG F+ + Q+ V+ + GE + V
Sbjct: 154 TWEGFQQSISGGGANFGDWIREFWFIGPAFAAINEGGQRISPIVVNSSNVEGGEKGPVGV 213
Query: 126 LASKLAADTAHTIKAICIVHNETATGVTNNLSKVRKLLDEYRHPALFLVDGVSSICAID- 184
K + +GV +++S R LF V+ ++ +I+
Sbjct: 214 TRWKFS---------------HAGSGVVDSIS---------RWTELFPVEQLNKPASIEG 249
Query: 185 -FRMDEWGIDVALTGSQKALSLPTGMGI 211
FR D GI+V + G+ +S G G+
Sbjct: 250 GFRSDSQGIEVKVDGNLPGVSRDAGGGL 277
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.418
Gapped
Lambda K H
0.267 0.0578 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,408,207
Number of extensions: 64772
Number of successful extensions: 195
Number of sequences better than 10.0: 1
Number of HSP's gapped: 183
Number of HSP's successfully gapped: 20
Length of query: 367
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 280
Effective length of database: 1,213,086
Effective search space: 339664080
Effective search space used: 339664080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.5 bits)