Query 017731
Match_columns 367
No_of_seqs 365 out of 1238
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 02:56:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017731.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017731hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 4.9E-34 1.1E-38 257.1 26.9 276 16-320 9-293 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 8.2E-33 1.8E-37 246.9 24.0 262 18-324 5-269 (276)
3 KOG4178 Soluble epoxide hydrol 100.0 7.3E-33 1.6E-37 239.2 22.3 276 16-322 23-321 (322)
4 PRK00870 haloalkane dehalogena 100.0 1.1E-32 2.3E-37 249.3 24.6 270 15-321 19-301 (302)
5 PRK03592 haloalkane dehalogena 100.0 1.6E-32 3.4E-37 247.5 23.1 274 17-323 9-291 (295)
6 PLN02679 hydrolase, alpha/beta 100.0 2E-31 4.2E-36 246.1 25.4 272 18-321 64-357 (360)
7 PLN02578 hydrolase 100.0 2.5E-31 5.5E-36 245.0 26.0 273 18-319 69-353 (354)
8 PRK10349 carboxylesterase BioH 100.0 2.8E-31 6.1E-36 234.4 22.1 249 26-320 3-255 (256)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.4E-30 2.9E-35 233.3 25.2 257 24-319 19-281 (282)
10 PLN02965 Probable pheophorbida 100.0 9.6E-31 2.1E-35 230.7 21.5 239 38-321 5-253 (255)
11 PRK06489 hypothetical protein; 100.0 2.3E-30 4.9E-35 239.3 25.0 279 21-323 46-359 (360)
12 TIGR03056 bchO_mg_che_rel puta 100.0 4.1E-30 8.9E-35 229.4 25.5 268 16-319 7-278 (278)
13 PRK03204 haloalkane dehalogena 100.0 1.1E-30 2.5E-35 233.8 20.8 262 16-318 15-285 (286)
14 PLN03087 BODYGUARD 1 domain co 100.0 3.7E-30 8.1E-35 241.2 24.6 272 18-321 179-479 (481)
15 PLN02385 hydrolase; alpha/beta 100.0 5.1E-29 1.1E-33 229.5 25.1 265 18-322 65-346 (349)
16 PRK10673 acyl-CoA esterase; Pr 100.0 3E-29 6.6E-34 221.1 22.4 248 26-320 2-254 (255)
17 TIGR03611 RutD pyrimidine util 100.0 2.9E-29 6.2E-34 220.8 21.6 253 27-320 1-257 (257)
18 PHA02857 monoglyceride lipase; 100.0 1.7E-28 3.8E-33 219.0 25.1 256 19-321 5-273 (276)
19 PRK10749 lysophospholipase L2; 100.0 2.4E-28 5.1E-33 223.2 25.8 275 16-321 32-329 (330)
20 PLN03084 alpha/beta hydrolase 100.0 1.2E-28 2.7E-33 226.7 23.9 266 19-320 109-383 (383)
21 TIGR01738 bioH putative pimelo 100.0 8.9E-29 1.9E-33 215.7 20.7 240 33-318 1-245 (245)
22 PRK07581 hypothetical protein; 100.0 1.1E-28 2.5E-33 226.5 22.4 275 18-321 19-336 (339)
23 PRK08775 homoserine O-acetyltr 100.0 1.6E-28 3.5E-33 225.6 23.3 267 18-322 39-340 (343)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 8.3E-29 1.8E-33 216.5 20.4 245 27-319 2-251 (251)
25 PLN02211 methyl indole-3-aceta 100.0 3.7E-28 8.1E-33 215.7 23.3 254 22-320 4-269 (273)
26 KOG1454 Predicted hydrolase/ac 100.0 2.2E-28 4.7E-33 220.3 21.5 264 35-322 57-325 (326)
27 TIGR01392 homoserO_Ac_trn homo 100.0 4.4E-28 9.5E-33 223.4 23.0 269 19-319 10-351 (351)
28 PLN02298 hydrolase, alpha/beta 100.0 2.4E-27 5.2E-32 217.0 27.5 265 18-322 36-318 (330)
29 PF12697 Abhydrolase_6: Alpha/ 100.0 2.9E-28 6.3E-33 209.6 19.6 224 39-313 1-228 (228)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 8.5E-28 1.8E-32 210.2 22.2 236 35-320 1-241 (242)
31 PRK00175 metX homoserine O-ace 100.0 1.4E-27 3.1E-32 221.7 23.9 287 18-324 26-377 (379)
32 TIGR01250 pro_imino_pep_2 prol 100.0 5.5E-27 1.2E-31 209.6 24.6 268 18-319 5-288 (288)
33 KOG4409 Predicted hydrolase/ac 100.0 9E-27 1.9E-31 201.9 21.8 261 34-320 88-363 (365)
34 TIGR03695 menH_SHCHC 2-succiny 100.0 1E-26 2.2E-31 203.0 20.3 241 37-319 2-251 (251)
35 PRK14875 acetoin dehydrogenase 99.9 5.4E-26 1.2E-30 211.5 24.4 255 18-320 112-370 (371)
36 PRK06765 homoserine O-acetyltr 99.9 1.6E-25 3.4E-30 206.6 25.0 282 20-320 36-387 (389)
37 TIGR01249 pro_imino_pep_1 prol 99.9 1.5E-25 3.2E-30 202.9 23.4 120 19-161 9-129 (306)
38 PLN02894 hydrolase, alpha/beta 99.9 3.4E-25 7.4E-30 206.7 24.4 273 26-324 93-388 (402)
39 PLN02652 hydrolase; alpha/beta 99.9 3.8E-25 8.3E-30 204.8 24.0 258 21-323 117-389 (395)
40 COG2267 PldB Lysophospholipase 99.9 3.9E-25 8.5E-30 197.3 22.3 272 15-322 10-295 (298)
41 PLN02980 2-oxoglutarate decarb 99.9 2.1E-25 4.5E-30 237.8 23.7 260 27-326 1360-1644(1655)
42 PRK05855 short chain dehydroge 99.9 4.6E-26 9.9E-31 224.4 15.6 274 17-322 5-293 (582)
43 KOG2984 Predicted hydrolase [G 99.9 5.4E-26 1.2E-30 181.0 11.5 252 16-321 22-276 (277)
44 KOG1455 Lysophospholipase [Lip 99.9 2.8E-24 6E-29 183.2 22.7 260 16-321 29-312 (313)
45 COG1647 Esterase/lipase [Gener 99.9 3.9E-24 8.5E-29 173.5 18.0 218 37-320 16-243 (243)
46 TIGR01607 PST-A Plasmodium sub 99.9 2.8E-23 6.1E-28 189.4 23.4 257 20-319 3-331 (332)
47 PLN02511 hydrolase 99.9 7.6E-24 1.6E-28 196.9 16.9 264 19-324 76-368 (388)
48 KOG2382 Predicted alpha/beta h 99.9 9.2E-23 2E-27 176.8 19.9 252 35-322 51-314 (315)
49 PRK05077 frsA fermentation/res 99.9 5.7E-21 1.2E-25 178.5 23.3 227 23-321 177-412 (414)
50 PF00561 Abhydrolase_1: alpha/ 99.9 4.5E-22 9.8E-27 172.1 13.6 217 86-315 1-229 (230)
51 TIGR03100 hydr1_PEP hydrolase, 99.9 1.2E-20 2.5E-25 167.8 22.3 246 21-320 8-274 (274)
52 PRK10985 putative hydrolase; P 99.9 1.2E-20 2.6E-25 171.9 21.7 262 18-321 35-320 (324)
53 COG2021 MET2 Homoserine acetyl 99.9 3E-20 6.4E-25 163.4 20.7 278 21-320 32-367 (368)
54 PRK13604 luxD acyl transferase 99.9 2.7E-20 5.8E-25 163.4 20.3 233 21-322 16-260 (307)
55 TIGR01836 PHA_synth_III_C poly 99.9 1.9E-20 4E-25 172.6 20.1 263 19-320 42-349 (350)
56 PLN02872 triacylglycerol lipas 99.9 1.2E-20 2.7E-25 174.1 17.8 280 18-322 48-390 (395)
57 PRK10566 esterase; Provisional 99.9 8.6E-20 1.9E-24 160.3 21.5 213 27-321 15-248 (249)
58 PRK11071 esterase YqiA; Provis 99.8 1.3E-19 2.8E-24 151.7 18.0 185 37-319 2-189 (190)
59 COG0596 MhpC Predicted hydrola 99.8 8.1E-19 1.8E-23 153.7 20.1 266 21-319 6-280 (282)
60 TIGR01838 PHA_synth_I poly(R)- 99.8 5.7E-19 1.2E-23 167.6 19.9 238 36-308 188-462 (532)
61 PF12695 Abhydrolase_5: Alpha/ 99.8 3.5E-19 7.5E-24 142.9 14.2 144 38-301 1-145 (145)
62 KOG2564 Predicted acetyltransf 99.8 2.3E-19 5.1E-24 150.4 11.5 247 35-322 73-328 (343)
63 PRK07868 acyl-CoA synthetase; 99.8 2.5E-17 5.4E-22 170.6 24.2 261 36-323 67-363 (994)
64 COG3208 GrsT Predicted thioest 99.8 3E-17 6.5E-22 136.8 16.4 220 36-321 7-236 (244)
65 KOG1552 Predicted alpha/beta h 99.8 2.8E-17 6E-22 137.9 14.8 193 36-324 60-255 (258)
66 KOG4391 Predicted alpha/beta h 99.8 7.4E-18 1.6E-22 136.2 10.7 217 19-324 59-285 (300)
67 PRK11460 putative hydrolase; P 99.7 6.2E-17 1.3E-21 140.1 17.0 176 34-320 14-211 (232)
68 PF06342 DUF1057: Alpha/beta h 99.7 1.4E-15 3E-20 129.3 23.1 111 28-163 24-138 (297)
69 TIGR03101 hydr2_PEP hydrolase, 99.7 1.9E-16 4.1E-21 138.4 14.1 103 36-162 25-134 (266)
70 PLN02442 S-formylglutathione h 99.7 2.2E-15 4.7E-20 134.4 21.1 117 24-162 29-178 (283)
71 COG1506 DAP2 Dipeptidyl aminop 99.7 4.5E-15 9.7E-20 146.1 21.1 227 18-323 369-618 (620)
72 TIGR02821 fghA_ester_D S-formy 99.7 2.1E-14 4.5E-19 127.8 23.3 119 23-162 23-173 (275)
73 KOG4667 Predicted esterase [Li 99.7 2.2E-15 4.8E-20 121.9 15.1 217 37-322 34-259 (269)
74 PF00326 Peptidase_S9: Prolyl 99.7 3.2E-15 7E-20 128.0 16.5 184 84-323 13-211 (213)
75 PF03096 Ndr: Ndr family; Int 99.7 4.7E-15 1E-19 127.8 17.2 261 20-321 4-279 (283)
76 PLN00021 chlorophyllase 99.6 5.9E-15 1.3E-19 132.5 16.1 103 35-161 51-165 (313)
77 KOG2931 Differentiation-relate 99.6 3.2E-14 6.8E-19 120.9 19.3 267 17-322 24-307 (326)
78 PF00975 Thioesterase: Thioest 99.6 3.2E-14 6.9E-19 123.3 19.8 219 38-318 2-229 (229)
79 PF02230 Abhydrolase_2: Phosph 99.6 3.9E-15 8.6E-20 127.6 13.5 179 33-321 11-215 (216)
80 COG0400 Predicted esterase [Ge 99.6 7.6E-15 1.6E-19 122.7 13.0 169 35-313 17-201 (207)
81 COG0429 Predicted hydrolase of 99.6 1.7E-15 3.6E-20 131.5 8.6 245 35-321 74-340 (345)
82 KOG1838 Alpha/beta hydrolase [ 99.6 1.2E-13 2.7E-18 124.3 18.9 266 21-322 100-389 (409)
83 TIGR01839 PHA_synth_II poly(R) 99.6 1.5E-13 3.3E-18 129.4 18.5 256 9-302 184-482 (560)
84 TIGR03230 lipo_lipase lipoprot 99.6 4E-14 8.7E-19 131.0 13.8 118 27-166 32-158 (442)
85 TIGR01840 esterase_phb esteras 99.6 1.4E-13 3E-18 117.8 15.9 106 34-161 11-129 (212)
86 PF01738 DLH: Dienelactone hyd 99.6 1.5E-13 3.2E-18 118.1 15.3 178 35-321 13-217 (218)
87 TIGR00976 /NonD putative hydro 99.6 3.9E-13 8.5E-18 131.0 19.9 118 21-163 3-133 (550)
88 cd00707 Pancreat_lipase_like P 99.5 2E-14 4.4E-19 127.2 9.9 119 23-164 23-149 (275)
89 PF06500 DUF1100: Alpha/beta h 99.5 1.6E-13 3.5E-18 124.5 15.1 211 36-320 190-408 (411)
90 PF05448 AXE1: Acetyl xylan es 99.5 1.6E-12 3.4E-17 117.0 20.0 207 37-320 84-319 (320)
91 PF06821 Ser_hydrolase: Serine 99.5 9.9E-13 2.1E-17 107.5 16.4 155 39-306 1-158 (171)
92 TIGR01849 PHB_depoly_PhaZ poly 99.5 1.1E-12 2.3E-17 120.3 18.3 258 37-320 103-405 (406)
93 TIGR03502 lipase_Pla1_cef extr 99.5 1E-12 2.2E-17 129.0 17.6 111 15-147 418-575 (792)
94 PF10230 DUF2305: Uncharacteri 99.5 4.2E-12 9.1E-17 111.8 19.1 110 36-164 2-124 (266)
95 COG2945 Predicted hydrolase of 99.5 2.3E-12 5E-17 103.1 14.9 172 34-319 26-205 (210)
96 COG0412 Dienelactone hydrolase 99.5 5.3E-12 1.1E-16 109.0 17.2 178 35-322 26-234 (236)
97 PRK10162 acetyl esterase; Prov 99.4 1.1E-11 2.4E-16 112.5 19.8 102 35-162 80-195 (318)
98 KOG2565 Predicted hydrolases o 99.4 1E-11 2.2E-16 108.8 16.7 131 16-160 125-262 (469)
99 COG3458 Acetyl esterase (deace 99.4 1.8E-11 4E-16 103.0 16.4 226 18-321 60-317 (321)
100 PF08538 DUF1749: Protein of u 99.4 1.8E-11 3.9E-16 106.8 16.3 108 25-163 21-149 (303)
101 KOG2624 Triglyceride lipase-ch 99.4 2.3E-11 5E-16 111.4 16.9 129 18-162 52-199 (403)
102 COG4757 Predicted alpha/beta h 99.3 2.9E-11 6.2E-16 99.5 12.8 254 18-318 9-280 (281)
103 PF12146 Hydrolase_4: Putative 99.3 5.9E-12 1.3E-16 88.7 7.6 76 24-122 1-79 (79)
104 KOG3043 Predicted hydrolase re 99.3 3.3E-11 7.2E-16 98.9 11.9 191 18-320 21-239 (242)
105 PF05728 UPF0227: Uncharacteri 99.3 4.8E-10 1E-14 92.7 18.2 88 39-162 2-91 (187)
106 PRK10252 entF enterobactin syn 99.3 7.4E-11 1.6E-15 127.0 17.2 98 37-161 1069-1170(1296)
107 COG3243 PhaC Poly(3-hydroxyalk 99.3 7.5E-11 1.6E-15 105.8 13.7 232 36-305 107-374 (445)
108 PRK10115 protease 2; Provision 99.3 5.2E-10 1.1E-14 111.2 20.7 121 19-161 421-558 (686)
109 PRK05371 x-prolyl-dipeptidyl a 99.3 1E-09 2.2E-14 109.9 22.1 213 81-321 275-519 (767)
110 COG3545 Predicted esterase of 99.2 4E-10 8.7E-15 89.3 14.5 134 109-321 42-179 (181)
111 COG3319 Thioesterase domains o 99.2 6.2E-10 1.3E-14 96.1 16.3 100 37-163 1-104 (257)
112 PF09752 DUF2048: Uncharacteri 99.2 1.7E-09 3.7E-14 95.9 18.4 232 35-319 91-347 (348)
113 PF02129 Peptidase_S15: X-Pro 99.2 9.4E-10 2E-14 97.8 16.8 119 23-166 1-140 (272)
114 PF02273 Acyl_transf_2: Acyl t 99.2 2.3E-09 5E-14 89.2 17.6 214 23-307 11-242 (294)
115 COG3571 Predicted hydrolase of 99.2 1.5E-09 3.2E-14 84.3 15.4 181 34-320 12-210 (213)
116 PTZ00472 serine carboxypeptida 99.2 6.7E-09 1.5E-13 98.5 21.8 136 24-164 60-218 (462)
117 PF12740 Chlorophyllase2: Chlo 99.2 5.9E-10 1.3E-14 95.6 13.0 112 27-162 8-131 (259)
118 PF03959 FSH1: Serine hydrolas 99.1 2.3E-10 4.9E-15 97.6 9.4 169 35-306 3-206 (212)
119 PF06057 VirJ: Bacterial virul 99.1 1.3E-09 2.8E-14 88.5 13.0 95 38-161 4-106 (192)
120 KOG3975 Uncharacterized conser 99.1 5.9E-09 1.3E-13 86.9 15.9 256 34-318 27-300 (301)
121 PF06028 DUF915: Alpha/beta hy 99.1 2.6E-08 5.5E-13 86.5 20.0 206 37-319 12-253 (255)
122 KOG2551 Phospholipase/carboxyh 99.1 1.1E-08 2.3E-13 84.3 15.5 61 258-321 160-220 (230)
123 PF07859 Abhydrolase_3: alpha/ 99.1 3.6E-09 7.7E-14 90.4 13.6 97 39-161 1-109 (211)
124 PF10503 Esterase_phd: Esteras 99.0 9.3E-09 2E-13 87.1 14.1 107 35-162 15-132 (220)
125 KOG4627 Kynurenine formamidase 99.0 1E-08 2.2E-13 83.0 12.6 186 26-307 55-253 (270)
126 smart00824 PKS_TE Thioesterase 99.0 1.7E-08 3.7E-13 85.7 14.9 95 41-162 2-102 (212)
127 KOG2100 Dipeptidyl aminopeptid 99.0 5.5E-08 1.2E-12 97.4 20.1 221 19-322 502-748 (755)
128 PRK04940 hypothetical protein; 99.0 1.3E-07 2.8E-12 76.7 18.6 51 109-162 38-92 (180)
129 PF07819 PGAP1: PGAP1-like pro 99.0 6E-09 1.3E-13 89.4 11.1 108 36-162 4-123 (225)
130 PF03403 PAF-AH_p_II: Platelet 98.9 3.9E-09 8.4E-14 97.5 9.4 103 36-161 100-261 (379)
131 PF12715 Abhydrolase_7: Abhydr 98.9 1.8E-08 4E-13 90.4 13.0 82 78-160 153-258 (390)
132 PF07224 Chlorophyllase: Chlor 98.9 1E-08 2.2E-13 86.4 10.1 102 36-162 46-157 (307)
133 KOG2112 Lysophospholipase [Lip 98.9 5.5E-08 1.2E-12 79.6 12.4 188 37-315 4-202 (206)
134 PLN02733 phosphatidylcholine-s 98.9 1.1E-08 2.4E-13 95.7 9.3 96 47-165 105-204 (440)
135 PF08840 BAAT_C: BAAT / Acyl-C 98.8 3.1E-08 6.7E-13 84.4 11.2 51 113-164 5-58 (213)
136 COG0657 Aes Esterase/lipase [L 98.8 5.8E-07 1.3E-11 81.6 19.5 101 35-161 78-190 (312)
137 COG4188 Predicted dienelactone 98.8 4.5E-09 9.7E-14 93.6 3.5 93 36-150 71-182 (365)
138 KOG2281 Dipeptidyl aminopeptid 98.8 2.5E-07 5.3E-12 87.0 14.7 205 35-320 641-866 (867)
139 COG4099 Predicted peptidase [G 98.8 1.1E-07 2.3E-12 81.6 11.3 121 23-161 170-303 (387)
140 PF03583 LIP: Secretory lipase 98.8 1.2E-07 2.7E-12 84.6 12.3 59 260-318 218-282 (290)
141 KOG1515 Arylacetamide deacetyl 98.7 1.5E-06 3.2E-11 78.3 18.7 104 35-164 89-209 (336)
142 PF00151 Lipase: Lipase; Inte 98.7 3E-08 6.4E-13 89.8 6.2 111 35-166 70-191 (331)
143 PF04301 DUF452: Protein of un 98.6 1.4E-06 3E-11 73.0 14.7 96 35-178 10-106 (213)
144 PF01674 Lipase_2: Lipase (cla 98.6 8.4E-08 1.8E-12 81.2 7.2 87 38-147 3-95 (219)
145 PF11339 DUF3141: Protein of u 98.6 4.3E-06 9.4E-11 77.5 17.1 73 85-164 100-177 (581)
146 PF05677 DUF818: Chlamydia CHL 98.5 5.2E-06 1.1E-10 73.3 15.9 104 19-148 116-236 (365)
147 KOG1551 Uncharacterized conser 98.5 2.7E-06 5.9E-11 71.8 13.5 210 84-324 140-369 (371)
148 KOG1553 Predicted alpha/beta h 98.5 4.4E-07 9.4E-12 79.4 9.0 75 84-161 267-344 (517)
149 KOG3253 Predicted alpha/beta h 98.5 1.3E-06 2.9E-11 81.7 11.4 131 85-304 208-348 (784)
150 PLN02606 palmitoyl-protein thi 98.5 4.1E-05 8.8E-10 67.3 19.5 107 37-169 27-139 (306)
151 PRK10439 enterobactin/ferric e 98.4 1.7E-05 3.8E-10 74.2 16.9 51 111-161 267-322 (411)
152 PF00450 Peptidase_S10: Serine 98.4 5.1E-05 1.1E-09 71.8 19.4 132 24-162 23-181 (415)
153 COG3509 LpqC Poly(3-hydroxybut 98.4 1.1E-05 2.3E-10 69.9 12.9 125 17-162 37-179 (312)
154 PLN02633 palmitoyl protein thi 98.4 8.5E-05 1.8E-09 65.3 18.6 107 38-170 27-139 (314)
155 KOG3847 Phospholipase A2 (plat 98.3 3.3E-06 7E-11 73.2 9.5 102 36-160 118-273 (399)
156 PF05057 DUF676: Putative seri 98.3 9.2E-06 2E-10 69.5 12.2 90 37-146 5-97 (217)
157 PF05990 DUF900: Alpha/beta hy 98.3 2.2E-06 4.7E-11 74.0 8.2 107 35-161 17-136 (233)
158 COG1075 LipA Predicted acetylt 98.3 3E-06 6.4E-11 77.4 8.6 101 38-164 61-166 (336)
159 PF05705 DUF829: Eukaryotic pr 98.2 9.8E-05 2.1E-09 64.3 16.2 60 259-318 176-240 (240)
160 PF12048 DUF3530: Protein of u 98.2 0.0002 4.3E-09 64.6 18.0 103 37-161 88-228 (310)
161 KOG4840 Predicted hydrolases o 98.2 5.8E-05 1.3E-09 62.4 12.6 99 37-162 37-144 (299)
162 COG2936 Predicted acyl esteras 98.0 0.00014 3.1E-09 69.2 14.2 128 18-165 23-162 (563)
163 COG4814 Uncharacterized protei 98.0 3.8E-05 8.3E-10 64.8 9.1 107 38-161 47-175 (288)
164 COG1073 Hydrolases of the alph 98.0 0.00019 4.1E-09 64.1 14.3 67 255-321 225-297 (299)
165 KOG3101 Esterase D [General fu 97.9 6.7E-05 1.5E-09 61.5 9.0 106 36-162 44-176 (283)
166 PF00756 Esterase: Putative es 97.9 2.6E-05 5.6E-10 68.4 7.0 50 112-161 97-149 (251)
167 COG3946 VirJ Type IV secretory 97.8 0.0004 8.7E-09 62.7 13.0 84 38-150 262-349 (456)
168 PF08386 Abhydrolase_4: TAP-li 97.8 5.6E-05 1.2E-09 56.3 6.5 61 261-322 34-95 (103)
169 KOG2541 Palmitoyl protein thio 97.8 0.0016 3.4E-08 55.8 14.9 105 38-170 25-136 (296)
170 PF02450 LCAT: Lecithin:choles 97.8 0.00016 3.5E-09 67.5 10.1 82 51-164 66-162 (389)
171 PLN02209 serine carboxypeptida 97.8 0.0096 2.1E-07 56.3 21.8 138 24-162 51-212 (437)
172 PLN03016 sinapoylglucose-malat 97.8 0.0058 1.3E-07 57.7 20.1 59 261-320 347-430 (433)
173 COG4782 Uncharacterized protei 97.7 0.00029 6.2E-09 63.0 10.0 106 35-160 115-232 (377)
174 cd00312 Esterase_lipase Estera 97.7 0.00023 4.9E-09 69.0 10.2 77 86-162 126-213 (493)
175 PF10142 PhoPQ_related: PhoPQ- 97.7 0.0013 2.9E-08 60.1 14.0 68 254-324 255-323 (367)
176 PF05577 Peptidase_S28: Serine 97.7 0.00035 7.6E-09 66.5 10.4 80 84-163 58-149 (434)
177 KOG1282 Serine carboxypeptidas 97.6 0.021 4.4E-07 53.9 21.3 134 18-162 47-213 (454)
178 PF10340 DUF2424: Protein of u 97.6 0.00042 9E-09 63.1 9.4 109 35-161 121-234 (374)
179 COG3150 Predicted esterase [Ge 97.6 0.00043 9.4E-09 54.8 7.7 88 39-162 2-91 (191)
180 PF02089 Palm_thioest: Palmito 97.5 0.00019 4.1E-09 62.6 6.0 108 38-170 7-124 (279)
181 KOG3724 Negative regulator of 97.5 0.0013 2.9E-08 64.1 12.0 113 38-161 91-219 (973)
182 PLN02213 sinapoylglucose-malat 97.4 0.012 2.7E-07 53.4 16.9 59 261-320 233-316 (319)
183 COG2830 Uncharacterized protei 97.4 0.0026 5.7E-08 49.9 10.3 96 35-178 10-106 (214)
184 COG4553 DepA Poly-beta-hydroxy 97.4 0.0076 1.6E-07 52.2 14.0 103 36-164 103-211 (415)
185 COG0627 Predicted esterase [Ge 97.2 0.002 4.4E-08 57.9 8.8 55 108-162 127-187 (316)
186 COG2272 PnbA Carboxylesterase 97.2 0.012 2.5E-07 55.2 13.7 118 23-162 78-217 (491)
187 COG1505 Serine proteases of th 97.2 0.0038 8.3E-08 59.4 10.7 119 19-161 399-534 (648)
188 PF11144 DUF2920: Protein of u 97.1 0.021 4.5E-07 52.5 13.9 61 262-322 294-369 (403)
189 cd00741 Lipase Lipase. Lipase 97.0 0.002 4.3E-08 51.8 6.6 52 111-162 8-67 (153)
190 PF00135 COesterase: Carboxyle 97.0 0.0039 8.4E-08 61.0 9.8 118 23-162 107-245 (535)
191 PF07082 DUF1350: Protein of u 97.0 0.084 1.8E-06 45.3 16.3 91 38-161 19-124 (250)
192 KOG1202 Animal-type fatty acid 97.0 0.021 4.5E-07 58.6 14.4 95 34-161 2121-2218(2376)
193 KOG3967 Uncharacterized conser 97.0 0.013 2.9E-07 48.4 10.8 118 37-161 102-226 (297)
194 KOG2183 Prolylcarboxypeptidase 96.9 0.0055 1.2E-07 55.7 8.9 118 25-163 65-203 (492)
195 COG1770 PtrB Protease II [Amin 96.8 0.082 1.8E-06 51.3 15.7 79 84-162 476-562 (682)
196 PF01764 Lipase_3: Lipase (cla 96.7 0.0042 9.1E-08 48.9 6.0 37 111-147 48-84 (140)
197 PLN02517 phosphatidylcholine-s 96.6 0.0043 9.3E-08 59.5 6.4 53 111-163 193-264 (642)
198 COG2382 Fes Enterochelin ester 96.6 0.053 1.2E-06 47.7 12.2 35 128-162 178-212 (299)
199 KOG2369 Lecithin:cholesterol a 96.5 0.0034 7.5E-08 58.1 4.9 87 50-161 124-224 (473)
200 COG2819 Predicted hydrolase of 96.2 0.01 2.2E-07 51.3 5.3 48 114-161 121-171 (264)
201 PF11187 DUF2974: Protein of u 96.1 0.019 4E-07 49.2 6.6 47 115-162 73-123 (224)
202 KOG2182 Hydrolytic enzymes of 96.0 0.043 9.2E-07 51.4 8.9 79 84-162 117-207 (514)
203 cd00519 Lipase_3 Lipase (class 95.8 0.022 4.8E-07 49.1 6.1 29 119-147 120-148 (229)
204 KOG2521 Uncharacterized conser 95.7 1.1 2.4E-05 40.8 16.4 67 261-327 225-296 (350)
205 COG2939 Carboxypeptidase C (ca 95.7 0.064 1.4E-06 50.5 8.7 124 35-162 100-236 (498)
206 PF06441 EHN: Epoxide hydrolas 95.6 0.021 4.5E-07 43.0 4.4 42 14-55 67-111 (112)
207 PF01083 Cutinase: Cutinase; 95.4 0.047 1E-06 45.1 6.2 73 85-161 39-121 (179)
208 KOG2237 Predicted serine prote 95.4 0.12 2.6E-06 49.9 9.4 78 84-161 498-583 (712)
209 PF05576 Peptidase_S37: PS-10 95.3 0.029 6.3E-07 51.4 4.9 109 29-161 56-168 (448)
210 PLN02162 triacylglycerol lipas 95.3 0.049 1.1E-06 51.0 6.5 37 110-146 261-297 (475)
211 PLN00413 triacylglycerol lipas 95.2 0.061 1.3E-06 50.5 6.9 51 111-161 268-326 (479)
212 PF06259 Abhydrolase_8: Alpha/ 95.1 0.08 1.7E-06 43.4 6.6 53 110-162 87-144 (177)
213 PF11288 DUF3089: Protein of u 95.1 0.051 1.1E-06 45.5 5.4 41 108-148 75-116 (207)
214 PLN02454 triacylglycerol lipas 94.8 0.049 1.1E-06 50.5 5.2 35 113-147 212-248 (414)
215 PLN02571 triacylglycerol lipas 94.8 0.047 1E-06 50.6 5.0 37 111-147 208-246 (413)
216 KOG1516 Carboxylesterase and r 94.4 0.23 4.9E-06 48.9 9.1 79 84-162 143-232 (545)
217 KOG4372 Predicted alpha/beta h 94.2 0.047 1E-06 49.9 3.6 101 23-145 67-168 (405)
218 PLN02408 phospholipase A1 94.2 0.075 1.6E-06 48.6 4.9 36 112-147 183-220 (365)
219 COG4947 Uncharacterized protei 94.2 0.098 2.1E-06 41.9 4.8 35 127-161 101-135 (227)
220 PF05277 DUF726: Protein of un 93.8 0.14 3E-06 46.6 5.8 38 125-162 218-260 (345)
221 PLN02934 triacylglycerol lipas 93.8 0.11 2.3E-06 49.3 5.1 37 110-146 304-340 (515)
222 PLN02310 triacylglycerol lipas 93.6 0.2 4.3E-06 46.5 6.5 37 111-147 189-229 (405)
223 PLN02324 triacylglycerol lipas 93.3 0.13 2.8E-06 47.7 4.8 36 112-147 198-235 (415)
224 PF04083 Abhydro_lipase: Parti 93.3 0.14 3.1E-06 34.0 3.7 36 18-53 16-60 (63)
225 PLN02802 triacylglycerol lipas 92.9 0.16 3.6E-06 48.1 4.9 36 112-147 313-350 (509)
226 PLN02753 triacylglycerol lipas 92.7 0.19 4.1E-06 47.9 4.9 37 111-147 291-332 (531)
227 PLN02719 triacylglycerol lipas 92.2 0.23 5.1E-06 47.1 4.9 37 111-147 277-318 (518)
228 PLN03037 lipase class 3 family 92.1 0.22 4.8E-06 47.4 4.7 37 111-147 298-338 (525)
229 PF07519 Tannase: Tannase and 92.0 1 2.2E-05 43.4 9.2 70 253-322 345-428 (474)
230 PLN02761 lipase class 3 family 91.9 0.26 5.7E-06 46.9 4.9 36 111-146 272-313 (527)
231 KOG2029 Uncharacterized conser 91.0 0.32 7E-06 46.7 4.5 86 72-161 472-571 (697)
232 KOG1283 Serine carboxypeptidas 91.0 1.7 3.6E-05 38.8 8.5 115 35-160 30-164 (414)
233 COG4287 PqaA PhoPQ-activated p 90.8 1.5 3.3E-05 39.8 8.2 62 258-322 326-388 (507)
234 KOG4569 Predicted lipase [Lipi 90.4 0.46 1E-05 43.5 4.9 37 111-147 155-191 (336)
235 PLN02847 triacylglycerol lipas 89.8 0.6 1.3E-05 45.3 5.2 26 122-147 246-271 (633)
236 PF08237 PE-PPE: PE-PPE domain 89.7 1.4 3.1E-05 37.7 7.0 64 85-148 2-69 (225)
237 KOG4540 Putative lipase essent 80.8 3.8 8.1E-05 36.0 5.2 30 120-149 269-298 (425)
238 COG5153 CVT17 Putative lipase 80.8 3.8 8.1E-05 36.0 5.2 30 120-149 269-298 (425)
239 COG1448 TyrB Aspartate/tyrosin 79.2 38 0.00083 31.3 11.2 85 38-161 173-264 (396)
240 PF06850 PHB_depo_C: PHB de-po 78.3 3.9 8.4E-05 33.9 4.3 60 261-320 134-201 (202)
241 PF07519 Tannase: Tannase and 77.6 5.3 0.00012 38.5 5.8 78 84-162 58-150 (474)
242 TIGR03712 acc_sec_asp2 accesso 76.5 74 0.0016 30.6 17.9 103 27-159 279-387 (511)
243 PF09949 DUF2183: Uncharacteri 71.9 26 0.00057 25.7 7.0 73 84-157 23-97 (100)
244 KOG2385 Uncharacterized conser 70.6 9.2 0.0002 36.5 5.2 38 124-161 444-486 (633)
245 PRK12467 peptide synthase; Pro 69.5 19 0.00042 44.5 9.0 99 35-160 3691-3793(3956)
246 KOG4388 Hormone-sensitive lipa 66.0 14 0.00031 35.9 5.6 98 38-161 398-507 (880)
247 PF09994 DUF2235: Uncharacteri 65.9 65 0.0014 28.6 9.6 39 109-147 72-112 (277)
248 PF00698 Acyl_transf_1: Acyl t 60.0 6.9 0.00015 35.5 2.4 30 117-146 74-103 (318)
249 smart00827 PKS_AT Acyl transfe 58.2 12 0.00026 33.5 3.6 28 119-146 74-101 (298)
250 COG3933 Transcriptional antite 57.7 49 0.0011 31.3 7.3 74 38-146 111-184 (470)
251 COG0529 CysC Adenylylsulfate k 56.8 44 0.00095 27.5 6.1 60 35-120 21-84 (197)
252 TIGR03131 malonate_mdcH malona 56.0 14 0.0003 33.1 3.6 29 118-146 67-95 (295)
253 COG2939 Carboxypeptidase C (ca 53.9 14 0.0003 35.4 3.3 59 262-320 426-490 (498)
254 PF06792 UPF0261: Uncharacteri 51.8 1.6E+02 0.0034 27.8 9.7 100 39-161 4-129 (403)
255 TIGR00128 fabD malonyl CoA-acy 51.3 17 0.00036 32.3 3.4 29 119-147 74-103 (290)
256 cd01714 ETF_beta The electron 51.1 49 0.0011 27.8 6.0 64 85-158 76-145 (202)
257 PRK02399 hypothetical protein; 50.7 2.2E+02 0.0048 26.8 10.5 100 40-161 6-131 (406)
258 cd07225 Pat_PNPLA6_PNPLA7 Pata 50.6 21 0.00046 32.2 3.9 32 117-148 33-64 (306)
259 cd07198 Patatin Patatin-like p 49.9 24 0.00052 28.6 3.8 31 119-149 18-48 (172)
260 COG1576 Uncharacterized conser 48.9 65 0.0014 25.7 5.8 49 85-144 67-115 (155)
261 PRK10279 hypothetical protein; 48.9 23 0.00049 31.9 3.8 32 118-149 24-55 (300)
262 PF03610 EIIA-man: PTS system 47.5 1E+02 0.0022 23.0 6.7 74 38-146 2-77 (116)
263 cd07207 Pat_ExoU_VipD_like Exo 47.0 27 0.00059 28.8 3.8 30 119-148 19-48 (194)
264 cd07227 Pat_Fungal_NTE1 Fungal 44.7 31 0.00066 30.5 3.9 32 117-148 28-59 (269)
265 COG1752 RssA Predicted esteras 44.2 28 0.00061 31.4 3.7 33 116-148 28-60 (306)
266 PF03283 PAE: Pectinacetyleste 43.8 1.3E+02 0.0028 28.0 7.9 33 127-159 156-192 (361)
267 cd07210 Pat_hypo_W_succinogene 43.6 36 0.00078 29.0 4.1 29 120-148 21-49 (221)
268 COG3887 Predicted signaling pr 41.2 59 0.0013 32.0 5.4 78 81-161 289-377 (655)
269 PF10081 Abhydrolase_9: Alpha/ 39.3 50 0.0011 29.2 4.3 51 112-162 91-147 (289)
270 PF02590 SPOUT_MTase: Predicte 39.1 63 0.0014 25.9 4.6 61 85-161 67-127 (155)
271 cd07228 Pat_NTE_like_bacteria 38.4 46 0.001 27.0 3.9 30 120-149 21-50 (175)
272 TIGR02816 pfaB_fam PfaB family 38.3 34 0.00074 33.6 3.4 31 118-148 255-286 (538)
273 cd07209 Pat_hypo_Ecoli_Z1214_l 38.2 43 0.00094 28.4 3.8 32 118-149 17-48 (215)
274 KOG2872 Uroporphyrinogen decar 37.6 1E+02 0.0022 27.5 5.7 70 37-135 253-336 (359)
275 PF11713 Peptidase_C80: Peptid 35.4 21 0.00046 28.7 1.3 49 91-139 59-116 (157)
276 PRK00103 rRNA large subunit me 35.2 1.3E+02 0.0029 24.1 5.9 45 85-139 67-111 (157)
277 COG0279 GmhA Phosphoheptose is 34.7 89 0.0019 25.3 4.6 78 40-139 44-121 (176)
278 cd07205 Pat_PNPLA6_PNPLA7_NTE1 34.7 65 0.0014 26.1 4.2 30 119-148 20-49 (175)
279 cd07212 Pat_PNPLA9 Patatin-lik 33.1 69 0.0015 29.0 4.4 19 130-148 35-53 (312)
280 PF05576 Peptidase_S37: PS-10 31.9 65 0.0014 30.3 4.0 62 256-320 346-413 (448)
281 PF12242 Eno-Rase_NADH_b: NAD( 31.9 74 0.0016 22.0 3.2 25 124-148 37-61 (78)
282 PF10605 3HBOH: 3HB-oligomer h 31.6 1.2E+02 0.0025 30.2 5.7 34 129-162 287-321 (690)
283 PRK05579 bifunctional phosphop 30.9 4.1E+02 0.0088 25.1 9.2 71 38-134 118-196 (399)
284 cd07230 Pat_TGL4-5_like Triacy 30.1 46 0.001 31.6 2.8 32 121-152 95-126 (421)
285 COG3673 Uncharacterized conser 29.5 4.4E+02 0.0096 24.1 8.6 72 85-160 64-151 (423)
286 cd07208 Pat_hypo_Ecoli_yjju_li 28.8 79 0.0017 27.7 4.0 31 120-150 19-50 (266)
287 cd07229 Pat_TGL3_like Triacylg 28.1 57 0.0012 30.6 3.0 35 120-154 104-138 (391)
288 cd00401 AdoHcyase S-adenosyl-L 27.2 67 0.0015 30.4 3.4 58 84-157 84-141 (413)
289 PF04084 ORC2: Origin recognit 26.2 3.4E+02 0.0074 24.8 7.6 77 40-140 57-150 (326)
290 PF06309 Torsin: Torsin; Inte 26.1 50 0.0011 25.4 1.9 29 33-61 49-79 (127)
291 cd07231 Pat_SDP1-like Sugar-De 25.8 64 0.0014 29.3 2.8 30 121-150 90-119 (323)
292 COG0218 Predicted GTPase [Gene 25.7 97 0.0021 26.0 3.6 62 255-320 129-198 (200)
293 PF14253 AbiH: Bacteriophage a 25.7 73 0.0016 27.9 3.2 15 125-139 233-247 (270)
294 cd07232 Pat_PLPL Patain-like p 25.2 62 0.0013 30.6 2.8 40 115-155 84-123 (407)
295 cd07224 Pat_like Patatin-like 24.8 1E+02 0.0023 26.5 3.9 30 120-149 20-51 (233)
296 COG4822 CbiK Cobalamin biosynt 24.5 2.5E+02 0.0055 23.9 5.7 18 114-131 181-198 (265)
297 TIGR00521 coaBC_dfp phosphopan 24.4 4.8E+02 0.01 24.6 8.4 94 38-161 114-234 (390)
298 PF09419 PGP_phosphatase: Mito 24.4 2.8E+02 0.0061 22.5 6.0 51 83-137 38-88 (168)
299 PF14035 YlzJ: YlzJ-like prote 24.4 1E+02 0.0022 20.6 2.9 40 1-40 5-44 (66)
300 PF01583 APS_kinase: Adenylyls 24.2 78 0.0017 25.4 2.8 35 36-92 1-37 (156)
301 COG0331 FabD (acyl-carrier-pro 24.0 92 0.002 28.2 3.5 22 125-146 83-104 (310)
302 TIGR02764 spore_ybaN_pdaB poly 23.3 41 0.00088 27.8 1.1 33 38-92 153-188 (191)
303 PF00448 SRP54: SRP54-type pro 22.9 2.3E+02 0.0049 23.6 5.5 66 84-159 82-149 (196)
304 cd07206 Pat_TGL3-4-5_SDP1 Tria 22.9 95 0.0021 27.9 3.3 37 115-152 86-122 (298)
305 cd00883 beta_CA_cladeA Carboni 22.6 1.1E+02 0.0023 25.3 3.4 32 113-144 67-98 (182)
306 TIGR03707 PPK2_P_aer polyphosp 22.4 1.3E+02 0.0029 25.9 4.0 70 34-139 28-101 (230)
307 cd07204 Pat_PNPLA_like Patatin 22.3 1.3E+02 0.0028 26.0 4.1 20 130-149 34-53 (243)
308 TIGR00246 tRNA_RlmH_YbeA rRNA 22.3 1.9E+02 0.0042 23.1 4.6 43 86-139 66-108 (153)
309 COG0541 Ffh Signal recognition 21.8 4.1E+02 0.0088 25.4 7.2 66 84-159 181-248 (451)
310 cd00382 beta_CA Carbonic anhyd 21.8 1.3E+02 0.0029 22.7 3.6 30 113-142 45-74 (119)
311 PF08484 Methyltransf_14: C-me 21.5 2.7E+02 0.0059 22.4 5.4 48 113-160 53-102 (160)
312 PRK11613 folP dihydropteroate 21.5 3.8E+02 0.0082 23.9 6.8 48 84-140 175-224 (282)
313 TIGR02873 spore_ylxY probable 21.2 65 0.0014 28.5 1.9 33 38-92 232-264 (268)
314 TIGR02240 PHA_depoly_arom poly 21.1 4.7E+02 0.01 22.6 7.6 58 262-322 26-89 (276)
315 PF00484 Pro_CA: Carbonic anhy 21.0 2.3E+02 0.005 22.2 5.0 35 111-145 39-73 (153)
316 TIGR03709 PPK2_rel_1 polyphosp 20.1 1.3E+02 0.0029 26.5 3.6 38 35-94 54-93 (264)
317 COG3340 PepE Peptidase E [Amin 20.0 3E+02 0.0065 23.4 5.4 36 36-93 32-70 (224)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.9e-34 Score=257.11 Aligned_cols=276 Identities=20% Similarity=0.239 Sum_probs=181.7
Q ss_pred CccccccCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC
Q 017731 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (367)
..++++.+|.+++|...|++.|+|||+||+++++..|..+++.|++ .|+|+++|+||
T Consensus 9 ~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~DlpG 65 (294)
T PLN02824 9 ETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAK-----------------------SHRVYAIDLLG 65 (294)
T ss_pred CCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHh-----------------------CCeEEEEcCCC
Confidence 4678889999999999986446899999999999999999999997 68999999999
Q ss_pred CCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCC--C
Q 017731 96 MGRSSVPVK-----KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--C 168 (367)
Q Consensus 96 ~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--~ 168 (367)
||.|+.+.. ...++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++....... .
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~ 145 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQ 145 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCccccccccc
Confidence 999987542 135899999999999999999999999999999999999999999999999999986432211 1
Q ss_pred CccchhhHHHHHHHhhccChhhh-hhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhcc
Q 017731 169 PKLDLQTLSIAIRFFRAKTPEKR-AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (367)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
+.............+........ .............+...+..... ......+.+........ ...........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 220 (294)
T PLN02824 146 PWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSA---VTDELVEAILRPGLEPG--AVDVFLDFISY 220 (294)
T ss_pred chhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhh---ccHHHHHHHHhccCCch--HHHHHHHHhcc
Confidence 11111111111111111000000 00000000000111111111100 00111111111110000 00000111100
Q ss_pred ccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
.........+.++++|+++|+|++|.++|.+.++.+.+. .++++++++++ ||++++|+|+++++.|.+|+++
T Consensus 221 ~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 221 SGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANF-DAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhc-CCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 011112355788899999999999999999999887775 47789999987 9999999999999999999976
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=8.2e-33 Score=246.86 Aligned_cols=262 Identities=22% Similarity=0.296 Sum_probs=178.7
Q ss_pred cccccCCcEEEEEEe--cCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC
Q 017731 18 AALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~--g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (367)
++++.+|.+++|... ++++++|||+||++++...|.++++.|.+ +|+|+++|+||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G 61 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDP-----------------------DLEVIAFDVPG 61 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhcc-----------------------CceEEEECCCC
Confidence 356779999999775 34556799999999999999999999987 89999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhh
Q 017731 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (367)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (367)
||.|+.+. ..++++++++++.++++.++.++++|+||||||.+++.+|.++|++|+++|++++...... .+.....
T Consensus 62 ~G~S~~~~--~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~- 137 (276)
T TIGR02240 62 VGGSSTPR--HPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVM-VPGKPKV- 137 (276)
T ss_pred CCCCCCCC--CcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcccc-CCCchhH-
Confidence 99998654 4678999999999999999999999999999999999999999999999999998743110 0100000
Q ss_pred HHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCc-hhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHH
Q 017731 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (367)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (367)
.. ..... ....... .........+.... ........+....... ....+...... .......
T Consensus 138 ---~~-~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~ 200 (276)
T TIGR02240 138 ---LM-MMASP--RRYIQPS----HGIHIAPDIYGGAFRRDPELAMAHASKVRSG---GKLGYYWQLFA----GLGWTSI 200 (276)
T ss_pred ---HH-HhcCc--hhhhccc----cccchhhhhccceeeccchhhhhhhhhcccC---CCchHHHHHHH----HcCCchh
Confidence 00 00000 0000000 00000000111000 0000011111100000 00000000000 0111123
Q ss_pred HHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhhhccC
Q 017731 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 255 ~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~~~~~ 324 (367)
+.++++++|+++|+|++|+++|++.++++.+.+ ++++++++++||+++.|+|+++++.|.+|+++.++.
T Consensus 201 ~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~-~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 269 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRI-PNAELHIIDDGHLFLITRAEAVAPIIMKFLAEERQR 269 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC-CCCEEEEEcCCCchhhccHHHHHHHHHHHHHHhhhh
Confidence 557889999999999999999999999999886 889999998899999999999999999999987654
No 3
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=7.3e-33 Score=239.21 Aligned_cols=276 Identities=28% Similarity=0.369 Sum_probs=186.1
Q ss_pred CccccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
..++++.+|++++|...|. +.|.|+++||++.+...|+.++..|+. +||+|+++|+|
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~----------------------~~~rviA~Dlr 80 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLAS----------------------RGYRVIAPDLR 80 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhh----------------------cceEEEecCCC
Confidence 3478889999999999985 567899999999999999999999999 68999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchh
Q 017731 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (367)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (367)
|+|.|+.+.....|++..++.|+..++++++.++++++||+|||++|+.+|..+|++|+++|+++.+.. .|.....
T Consensus 81 GyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~----~p~~~~~ 156 (322)
T KOG4178|consen 81 GYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP----NPKLKPL 156 (322)
T ss_pred CCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC----Ccccchh
Confidence 999999999878999999999999999999999999999999999999999999999999999998754 1111111
Q ss_pred hHHHHHHHhhccChhhh----hhcccCccccHHHHHHHhCCC----------------chhhHhHHHHHHhhhhcCcccc
Q 017731 175 TLSIAIRFFRAKTPEKR----AAVDLDTHYSQEYLEEYVGSS----------------TRRAILYQEYVKGISATGMQSN 234 (367)
Q Consensus 175 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
................. ..........+.....+.... .......+.+...+...+....
T Consensus 157 ~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gp 236 (322)
T KOG4178|consen 157 DSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGP 236 (322)
T ss_pred hhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccccccccc
Confidence 10000000000000000 000000000111111111000 0011112222222223333333
Q ss_pred ccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCc-EEEEcCC-CCcccccChHHHHH
Q 017731 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVA-RMIDLPG-GHLVSHERTEEVNQ 312 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~-~~~~~~g-gH~~~~e~p~~~~~ 312 (367)
..+.+.+...|. .....+.++++|+++|+|++|.+.+........++..+.. +.++++| ||+++.|+|+++++
T Consensus 237 lNyyrn~~r~w~-----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~ 311 (322)
T KOG4178|consen 237 LNYYRNFRRNWE-----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQ 311 (322)
T ss_pred chhhHHHhhCch-----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHH
Confidence 333333333221 1123467889999999999999998764333444333444 6777787 99999999999999
Q ss_pred HHHHHHhhhc
Q 017731 313 ALIDLIKASE 322 (367)
Q Consensus 313 ~i~~fl~~~~ 322 (367)
.|.+|+++..
T Consensus 312 ~i~~f~~~~~ 321 (322)
T KOG4178|consen 312 AILGFINSFS 321 (322)
T ss_pred HHHHHHHhhc
Confidence 9999998753
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-32 Score=249.25 Aligned_cols=270 Identities=17% Similarity=0.184 Sum_probs=176.6
Q ss_pred CCccccccCC-----cEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 15 APDAALNDNG-----IKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 15 ~~~~~~~~~g-----~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
...++++.++ .+++|...|+ ..|+|||+||++++...|..+++.|.+ +||+|
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~----------------------~gy~v 76 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAA----------------------AGHRV 76 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHh----------------------CCCEE
Confidence 3567788888 8999999885 346899999999999999999999986 48999
Q ss_pred EeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCC
Q 017731 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (367)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (367)
+++|+||||.|+.+.....++++++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++........
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 156 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGP 156 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCcccc
Confidence 99999999999876543468999999999999999999999999999999999999999999999999998642111100
Q ss_pred CccchhhHHHHHHHhhccCh---hhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhh
Q 017731 169 PKLDLQTLSIAIRFFRAKTP---EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (367)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
. ................ ..............+....+...... .. ........... . ........
T Consensus 157 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~--~-~~~~~~~~---- 224 (302)
T PRK00870 157 M---PDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPD-ES-YKAGARAFPLL--V-PTSPDDPA---- 224 (302)
T ss_pred c---hHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhcccCC-hh-hhcchhhhhhc--C-CCCCCCcc----
Confidence 0 0001101100000000 00000000011111111111110000 00 00000000000 0 00000000
Q ss_pred ccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcE---EEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR---MIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~---~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
..........+.++++|+++|+|++|.++|... +.+.+.+ ++++ ++++++ ||++++|+|+++++.|.+|++++
T Consensus 225 -~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~-~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 225 -VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRI-PGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred -hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhc-ccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 000111234567899999999999999999766 7787776 6655 788998 99999999999999999999764
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.6e-32 Score=247.47 Aligned_cols=274 Identities=16% Similarity=0.199 Sum_probs=177.1
Q ss_pred ccccccCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC
Q 017731 17 DAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (367)
Q Consensus 17 ~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (367)
..+++.+|.+++|...|+++ +|||+||++++...|..+++.|.+ .++|+++|+|||
T Consensus 9 ~~~~~~~g~~i~y~~~G~g~-~vvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~D~~G~ 64 (295)
T PRK03592 9 MRRVEVLGSRMAYIETGEGD-PIVFLHGNPTSSYLWRNIIPHLAG-----------------------LGRCLAPDLIGM 64 (295)
T ss_pred ceEEEECCEEEEEEEeCCCC-EEEEECCCCCCHHHHHHHHHHHhh-----------------------CCEEEEEcCCCC
Confidence 45677899999999999765 699999999999999999999997 569999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhH
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (367)
|.|+.+. ..++++++++|+.+++++++.++++++||||||.+++.++.++|++|+++|++++..... ....... ..
T Consensus 65 G~S~~~~--~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~-~~~~~~~-~~ 140 (295)
T PRK03592 65 GASDKPD--IDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPM-TWDDFPP-AV 140 (295)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCc-chhhcch-hH
Confidence 9998775 368999999999999999999999999999999999999999999999999999843211 0011111 11
Q ss_pred HHHHHHhhccChhhhhhcccCccccHHHHHHHhCCC---chhhHhHHHHHHhhhhcCc-cccccccchhhh--h--hccc
Q 017731 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS---TRRAILYQEYVKGISATGM-QSNYGFDGQIHA--C--WMHK 248 (367)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~--~~~~ 248 (367)
......+......... . .....+....+... .........+...+..... .....+...... . ....
T Consensus 141 ~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 141 RELFQALRSPGEGEEM-V----LEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVA 215 (295)
T ss_pred HHHHHHHhCccccccc-c----cchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHh
Confidence 1111111111000000 0 00011111111110 0001111111111100000 000000000000 0 0000
Q ss_pred cChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhcc
Q 017731 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEK 323 (367)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~~ 323 (367)
...+....+.++++|+|+|+|++|.++++....++...+.++++++++++ ||+++.|+|+++++.|.+|+++...
T Consensus 216 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 216 LVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred hhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 00112345677899999999999999955555555554447899999987 9999999999999999999987653
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2e-31 Score=246.07 Aligned_cols=272 Identities=21% Similarity=0.251 Sum_probs=173.5
Q ss_pred cccccCCc-EEEEEEecCC-----CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEee
Q 017731 18 AALNDNGI-KIFYRTYGRG-----PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (367)
Q Consensus 18 ~~~~~~g~-~l~~~~~g~~-----~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (367)
+.+..+|. +++|...|++ .|+|||+||++++...|.++++.|.+ +|+|+++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-----------------------~~~via~ 120 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-----------------------NYTVYAI 120 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEE
Confidence 55666777 9999999875 36799999999999999999999987 8999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh-CCcceeEEEEeccCCCCCCCCCc
Q 017731 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~ 170 (367)
|+||||.|+.+.. ..++++++++++.+++++++.++++|+||||||.+++.++.. +|++|+++|++++....... ..
T Consensus 121 Dl~G~G~S~~~~~-~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~-~~ 198 (360)
T PLN02679 121 DLLGFGASDKPPG-FSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNK-AV 198 (360)
T ss_pred CCCCCCCCCCCCC-ccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccc-cc
Confidence 9999999987643 368999999999999999999999999999999999998874 79999999999986422110 00
Q ss_pred cchhhHHH------HHHHhhccChhhhh--hcccCccccHHHHHHHhCCC-chhhHhHHHHHHhhhhcCccccccccchh
Q 017731 171 LDLQTLSI------AIRFFRAKTPEKRA--AVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQI 241 (367)
Q Consensus 171 ~~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (367)
........ ...++......... ............+...+... .......+. +.... .. .......
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~-~~~~~~~ 272 (360)
T PLN02679 199 VDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEI----IRGPA-DD-EGALDAF 272 (360)
T ss_pred cchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHH----HHhhc-cC-CChHHHH
Confidence 00000000 00000000000000 00000000001111111110 001111111 11000 00 0000111
Q ss_pred hhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHH-----HHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHH
Q 017731 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICY-----ARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALI 315 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~-----~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~ 315 (367)
..........+....+.++++|+|+|+|++|.++|++. .+.+.+.+ ++++++++++ ||++++|+|+++++.|.
T Consensus 273 ~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~i-p~~~l~~i~~aGH~~~~E~Pe~~~~~I~ 351 (360)
T PLN02679 273 VSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQL-PNVTLYVLEGVGHCPHDDRPDLVHEKLL 351 (360)
T ss_pred HHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccC-CceEEEEcCCCCCCccccCHHHHHHHHH
Confidence 11111111122345677899999999999999998763 23455544 8899999998 99999999999999999
Q ss_pred HHHhhh
Q 017731 316 DLIKAS 321 (367)
Q Consensus 316 ~fl~~~ 321 (367)
+||++.
T Consensus 352 ~FL~~~ 357 (360)
T PLN02679 352 PWLAQL 357 (360)
T ss_pred HHHHhc
Confidence 999864
No 7
>PLN02578 hydrolase
Probab=100.00 E-value=2.5e-31 Score=245.01 Aligned_cols=273 Identities=19% Similarity=0.216 Sum_probs=176.6
Q ss_pred cccccCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC
Q 017731 18 AALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (367)
.+++.+|.+++|...|+++ +||++||++++...|..+++.|.+ +|+|+++|+||||
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~-~vvliHG~~~~~~~w~~~~~~l~~-----------------------~~~v~~~D~~G~G 124 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGL-PIVLIHGFGASAFHWRYNIPELAK-----------------------KYKVYALDLLGFG 124 (354)
T ss_pred eEEEECCEEEEEEEcCCCC-eEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 5567789999999998775 599999999999999999999987 8999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccc-----
Q 017731 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD----- 172 (367)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~----- 172 (367)
.|+.+. ..++.+.+++++.++++.++.++++++|||+||.+++.+|.++|++|+++|++++.+..........
T Consensus 125 ~S~~~~--~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~ 202 (354)
T PLN02578 125 WSDKAL--IEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVV 202 (354)
T ss_pred CCCCcc--cccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccccccccccccccc
Confidence 998765 4689999999999999999989999999999999999999999999999999987642111100000
Q ss_pred -hhhHH-----HHHHHhhccChhhhhhcccCccccHHHHHHHhCCCc-hhhHhHHHHHHhhhhcCccccccccchhhhhh
Q 017731 173 -LQTLS-----IAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (367)
Q Consensus 173 -~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
..... ...............................+.... ............. ........+...+....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 280 (354)
T PLN02578 203 EETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPA--ADPNAGEVYYRLMSRFL 280 (354)
T ss_pred ccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcc--cCCchHHHHHHHHHHHh
Confidence 00000 000000000000000000000000000000010000 0000011000000 00000000111111111
Q ss_pred ccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHh
Q 017731 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~ 319 (367)
.........+.++++++|+++|+|++|.++|.+.++.+.+.+ ++++++++++||+++.|+|+++++.|.+|++
T Consensus 281 ~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~-p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 281 FNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY-PDTTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred cCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 111112234567889999999999999999999999998876 8899999977999999999999999999986
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=2.8e-31 Score=234.35 Aligned_cols=249 Identities=18% Similarity=0.184 Sum_probs=162.6
Q ss_pred EEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCC
Q 017731 26 KIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK 105 (367)
Q Consensus 26 ~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~ 105 (367)
+++|...|+++|+|||+||+++++..|.++++.|.+ .|+|+++|+||||.|+...
T Consensus 3 ~~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~vi~~Dl~G~G~S~~~~-- 57 (256)
T PRK10349 3 NIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSS-----------------------HFTLHLVDLPGFGRSRGFG-- 57 (256)
T ss_pred ccchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhc-----------------------CCEEEEecCCCCCCCCCCC--
Confidence 377888898877899999999999999999999987 7999999999999997543
Q ss_pred CCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCC--CCccchhhHHHHHHHh
Q 017731 106 TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CPKLDLQTLSIAIRFF 183 (367)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~ 183 (367)
.++++++++++.+ ++.++++++||||||.+++.+|.++|++|+++|++++.+..... .+.............+
T Consensus 58 -~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (256)
T PRK10349 58 -ALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQL 132 (256)
T ss_pred -CCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHH
Confidence 4688888777654 46689999999999999999999999999999999875321110 0111000011110000
Q ss_pred hccChhhhhhcccCccccHHHHHHH-hCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCc
Q 017731 184 RAKTPEKRAAVDLDTHYSQEYLEEY-VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (367)
..... .....++... ......... ...+........... ...+..........+..+.+.++++
T Consensus 133 ~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~i~~ 197 (256)
T PRK10349 133 SDDFQ----------RTVERFLALQTMGTETARQD-ARALKKTVLALPMPE----VDVLNGGLEILKTVDLRQPLQNVSM 197 (256)
T ss_pred HhchH----------HHHHHHHHHHHccCchHHHH-HHHHHHHhhccCCCc----HHHHHHHHHHHHhCccHHHHhhcCC
Confidence 00000 0001111110 011100100 111111111100000 0000000000011123456788999
Q ss_pred cEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 263 Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
|+++|+|++|.++|.+.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|-++
T Consensus 198 P~lii~G~~D~~~~~~~~~~~~~~i-~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 198 PFLRLYGYLDGLVPRKVVPMLDKLW-PHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CeEEEecCCCccCCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999988888876 8999999998 9999999999999999998654
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.98 E-value=1.4e-30 Score=233.27 Aligned_cols=257 Identities=21% Similarity=0.305 Sum_probs=162.1
Q ss_pred CcEEEEEEecCCCCeEEEEcCCCCCccchHHh---HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC
Q 017731 24 GIKIFYRTYGRGPTKVILITGLAGTHDAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (367)
Q Consensus 24 g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (367)
+.+++|...|+++ +||++||++.+...|..+ +..|.+ .||+|+++|+||||.|+
T Consensus 19 ~~~~~y~~~g~~~-~ivllHG~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~~D~~G~G~S~ 75 (282)
T TIGR03343 19 NFRIHYNEAGNGE-AVIMLHGGGPGAGGWSNYYRNIGPFVD----------------------AGYRVILKDSPGFNKSD 75 (282)
T ss_pred ceeEEEEecCCCC-eEEEECCCCCchhhHHHHHHHHHHHHh----------------------CCCEEEEECCCCCCCCC
Confidence 5679999988664 699999999988877653 445544 48999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHH
Q 017731 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (367)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (367)
........+ ..+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++....................
T Consensus 76 ~~~~~~~~~-~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T TIGR03343 76 AVVMDEQRG-LVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLF 154 (282)
T ss_pred CCcCccccc-chhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHH
Confidence 653211222 2568999999999999999999999999999999999999999999999753211100001101111111
Q ss_pred HHhhccChhhhhhcccCccccHHHHHHH-hCCCchhhHhHHHHHHhhhhcCccccccccchhhhhh-ccccChHHHHHhH
Q 017731 181 RFFRAKTPEKRAAVDLDTHYSQEYLEEY-VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW-MHKMTQKDIQTIR 258 (367)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 258 (367)
............ .++... ...........+......... ............ ......+....++
T Consensus 155 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (282)
T TIGR03343 155 KLYAEPSYETLK----------QMLNVFLFDQSLITEELLQGRWENIQRQ----PEHLKNFLISSQKAPLSTWDVTARLG 220 (282)
T ss_pred HHhcCCCHHHHH----------HHHhhCccCcccCcHHHHHhHHHHhhcC----HHHHHHHHHhccccccccchHHHHHh
Confidence 111100000000 000000 000000000000000000000 000000000000 0001112335678
Q ss_pred hcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 259 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
++++|+++++|++|.+++++.++.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~-~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNM-PDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhC-CCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 89999999999999999999999999986 8999999998 999999999999999999996
No 10
>PLN02965 Probable pheophorbidase
Probab=99.98 E-value=9.6e-31 Score=230.73 Aligned_cols=239 Identities=14% Similarity=0.125 Sum_probs=160.0
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
+|||+||++.+...|..+++.|.+ .+|+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~----------------------~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl 61 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA----------------------AGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPL 61 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh----------------------CCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHH
Confidence 599999999999999999999965 499999999999999976543 367899999999
Q ss_pred HHHHHHhCC-ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhh---
Q 017731 118 IALMDHLGW-KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA--- 193 (367)
Q Consensus 118 ~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (367)
.++++.++. ++++++||||||.+++.++.++|++|+++|++++....... ....... ...... ......
T Consensus 62 ~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~---~~~~~~~---~~~~~~-~~~~~~~~~ 134 (255)
T PLN02965 62 FALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGS---IISPRLK---NVMEGT-EKIWDYTFG 134 (255)
T ss_pred HHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCC---CccHHHH---hhhhcc-ccceeeeec
Confidence 999999987 49999999999999999999999999999999986321100 0000000 000000 000000
Q ss_pred --cccC---ccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEe
Q 017731 194 --VDLD---THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (367)
Q Consensus 194 --~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (367)
.... .....++....+........ .............. . ... . ......+..+++|+++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~----~~~-----~-~~~~~~~~~i~vP~lvi~ 200 (255)
T PLN02965 135 EGPDKPPTGIMMKPEFVRHYYYNQSPLED-YTLSSKLLRPAPVR---A----FQD-----L-DKLPPNPEAEKVPRVYIK 200 (255)
T ss_pred cCCCCCcchhhcCHHHHHHHHhcCCCHHH-HHHHHHhcCCCCCc---c----hhh-----h-hhccchhhcCCCCEEEEE
Confidence 0000 00111122122111111110 01101111000000 0 000 0 001124456899999999
Q ss_pred ecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 269 G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
|++|.++|++.++.+.+.+ ++++++++++ ||++++|+|++|++.|.+|++..
T Consensus 201 g~~D~~~~~~~~~~~~~~~-~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 201 TAKDNLFDPVRQDVMVENW-PPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred cCCCCCCCHHHHHHHHHhC-CcceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999986 8899999987 99999999999999999998865
No 11
>PRK06489 hypothetical protein; Provisional
Probab=99.98 E-value=2.3e-30 Score=239.35 Aligned_cols=279 Identities=15% Similarity=0.166 Sum_probs=169.3
Q ss_pred ccCCcEEEEEEecCC--------CCeEEEEcCCCCCccchH--HhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEe
Q 017731 21 NDNGIKIFYRTYGRG--------PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (367)
Q Consensus 21 ~~~g~~l~~~~~g~~--------~p~vv~lHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (367)
+.+|.+++|...|++ .|+|||+||++++...|. .+.+.|.... ..+..++|+|++
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~---------------~~l~~~~~~Via 110 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPG---------------QPLDASKYFIIL 110 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCC---------------CcccccCCEEEE
Confidence 478999999999974 467999999999988775 5555552200 011124899999
Q ss_pred eCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHH-HHhCCceEE-EEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 91 FDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALM-DHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 91 ~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l-~~~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
+|+||||.|+.+... ..++++++++++.+++ +++++++++ ++||||||++++.+|.++|++|+++|++++...
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~ 190 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPT 190 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcc
Confidence 999999999866431 1478999999988854 889999985 899999999999999999999999999987532
Q ss_pred CCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHH---H--------HHhCCCchhhHhHHHHHHhhhhcCcc
Q 017731 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYL---E--------EYVGSSTRRAILYQEYVKGISATGMQ 232 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (367)
.... ................................... . .+..... .......+.+........
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 266 (360)
T PRK06489 191 EMSG---RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAP-TRAAADKLVDERLAAPVT 266 (360)
T ss_pred cccH---HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcC-ChHHHHHHHHHHHHhhhh
Confidence 1100 00000000001111000000000000000000000 0 0000000 000001111111000000
Q ss_pred ccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHH--HHHHHHhcCCcEEEEcCC-----CCccccc
Q 017731 233 SNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA--RRLAEKLYPVARMIDLPG-----GHLVSHE 305 (367)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~--~~~~~~~~~~~~~~~~~g-----gH~~~~e 305 (367)
. .... ....+......+..+.+.++++|+|+|+|++|.++|++.+ +.+.+.+ ++++++++++ ||.++ +
T Consensus 267 ~--~~~~-~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i-p~a~l~~i~~a~~~~GH~~~-e 341 (360)
T PRK06489 267 A--DAND-FLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV-KHGRLVLIPASPETRGHGTT-G 341 (360)
T ss_pred c--CHHH-HHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC-cCCeEEEECCCCCCCCcccc-c
Confidence 0 0000 0000111111233467889999999999999999998875 7788876 8999999986 99997 8
Q ss_pred ChHHHHHHHHHHHhhhcc
Q 017731 306 RTEEVNQALIDLIKASEK 323 (367)
Q Consensus 306 ~p~~~~~~i~~fl~~~~~ 323 (367)
+|+++++.|.+||++..+
T Consensus 342 ~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 342 SAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999987653
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=4.1e-30 Score=229.39 Aligned_cols=268 Identities=21% Similarity=0.243 Sum_probs=176.5
Q ss_pred CccccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 16 PDAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
..++++.++.+++|...|+ +.|+|||+||++++...|..+++.|++ +|+|+++|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~ 63 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-----------------------SFRVVAPDLP 63 (278)
T ss_pred ccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-----------------------CcEEEeecCC
Confidence 3467788999999999986 346899999999999999999999987 8999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchh
Q 017731 95 GMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (367)
Q Consensus 95 G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (367)
|||.|+.+.. ..++++++++++.+++++++.++++++||||||.+++.+|.++|++++++|++++..............
T Consensus 64 G~G~S~~~~~-~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~ 142 (278)
T TIGR03056 64 GHGFTRAPFR-FRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFP 142 (278)
T ss_pred CCCCCCCccc-cCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccc
Confidence 9999987653 367999999999999999998999999999999999999999999999999998764322111000000
Q ss_pred hHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCC--chhhHhHHHHHHhhhhcCccccccccchhhhhhccccChH
Q 017731 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS--TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (367)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (367)
....... ............... .+......... .........+....... ......... ........
T Consensus 143 ~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~~ 211 (278)
T TIGR03056 143 YMARVLA-CNPFTPPMMSRGAAD----QQRVERLIRDTGSLLDKAGMTYYGRLIRSP-----AHVDGALSM-MAQWDLAP 211 (278)
T ss_pred hhhHhhh-hcccchHHHHhhccc----CcchhHHhhccccccccchhhHHHHhhcCc-----hhhhHHHHH-hhcccccc
Confidence 0000000 000000000000000 00000000000 00000000000000000 000000000 00000011
Q ss_pred HHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 253 ~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
....++++++|+++|+|++|.++|.+..+.+.+.+ ++++++.+++ ||+++.|+|+++++.|.+|++
T Consensus 212 ~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 212 LNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV-PTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred hhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc-cCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 22456778999999999999999999999998876 8899999998 999999999999999999985
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=1.1e-30 Score=233.78 Aligned_cols=262 Identities=17% Similarity=0.232 Sum_probs=168.1
Q ss_pred CccccccCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC
Q 017731 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (367)
...+++.+|.+++|...|++ |+|||+||++.+...|..+++.|.+ +|+|+++|+||
T Consensus 15 ~~~~~~~~~~~i~y~~~G~~-~~iv~lHG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G 70 (286)
T PRK03204 15 ESRWFDSSRGRIHYIDEGTG-PPILLCHGNPTWSFLYRDIIVALRD-----------------------RFRCVAPDYLG 70 (286)
T ss_pred cceEEEcCCcEEEEEECCCC-CEEEEECCCCccHHHHHHHHHHHhC-----------------------CcEEEEECCCC
Confidence 45678889999999999976 5799999999988899999999987 89999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhh
Q 017731 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (367)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (367)
||.|+.+.. ..++.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++..... .....
T Consensus 71 ~G~S~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~---~~~~~-- 144 (286)
T PRK03204 71 FGLSERPSG-FGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA---DTLAM-- 144 (286)
T ss_pred CCCCCCCCc-cccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC---CchhH--
Confidence 999987653 357899999999999999999999999999999999999999999999999987653110 00000
Q ss_pred HHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCC---chhhHhHHHHHHhhhhcCccccccccchhhhhhcc--ccC
Q 017731 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS---TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH--KMT 250 (367)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 250 (367)
.......... ....... ....+..+++... .........+........ ...... .....+.. ...
T Consensus 145 -~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~ 214 (286)
T PRK03204 145 -KAFSRVMSSP-PVQYAIL-----RRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAA--ARRGVA-EMPKQILAARPLL 214 (286)
T ss_pred -HHHHHHhccc-cchhhhh-----hhhHHHHHhccccccCCCCHHHHHHhcCCCCCHH--HHHHHH-HHHHhcchhhHHH
Confidence 0000000000 0000000 0000011111100 000000111100000000 000000 00000000 000
Q ss_pred hHHHHHhHh--cCccEEEEeecCCccCcHH-HHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHH
Q 017731 251 QKDIQTIRS--AGFLVSVIHGRHDVIAQIC-YARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (367)
Q Consensus 251 ~~~~~~l~~--i~~Pvlii~G~~D~~~p~~-~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl 318 (367)
......+.. +++|+++|+|++|.++++. ..+.+.+.+ ++.+++++++ ||++++|+|+++++.|.+||
T Consensus 215 ~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i-p~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 215 ARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF-PDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc-CCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 000011111 2799999999999988655 567777776 8999999997 99999999999999999997
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.97 E-value=3.7e-30 Score=241.15 Aligned_cols=272 Identities=19% Similarity=0.269 Sum_probs=170.1
Q ss_pred cccccCCcEEEEEEecCC----CCeEEEEcCCCCCccchHH-hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 18 AALNDNGIKIFYRTYGRG----PTKVILITGLAGTHDAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~~----~p~vv~lHG~~~~~~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
.+.+.++.+++|...++. +|+|||+||++++...|.. +++.|.+. ..++|+|+++|
T Consensus 179 ~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~-------------------~~~~yrVia~D 239 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDA-------------------AKSTYRLFAVD 239 (481)
T ss_pred eeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHH-------------------hhCCCEEEEEC
Confidence 345567889999998852 3689999999999999985 44666520 01489999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCcc
Q 017731 93 NRGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (367)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (367)
+||||.|+.+.. ..++++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.... +..
T Consensus 240 l~G~G~S~~p~~-~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~---~~~ 315 (481)
T PLN03087 240 LLGFGRSPKPAD-SLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPV---PKG 315 (481)
T ss_pred CCCCCCCcCCCC-CcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCcccc---ccc
Confidence 999999987643 4689999999995 89999999999999999999999999999999999999999753221 110
Q ss_pred chhhHHHHHHHhh-ccC-hhhhhhcccCccc----------------cHHHHHHHhCCCchhhHhHHHHHHhhhhcCccc
Q 017731 172 DLQTLSIAIRFFR-AKT-PEKRAAVDLDTHY----------------SQEYLEEYVGSSTRRAILYQEYVKGISATGMQS 233 (367)
Q Consensus 172 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (367)
. ........... ... ...........++ ..+.+.......... ....+.+.......
T Consensus 316 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~l~~~~~~~~~~~ 390 (481)
T PLN03087 316 V-QATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMR----TFLIEGFFCHTHNA 390 (481)
T ss_pred h-hHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhh----HHHHHHHHhccchh
Confidence 0 00000000000 000 0000000000000 000000000000000 00000000000000
Q ss_pred cccccchhhhhhcc--ccChHHH-HHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccc-cChH
Q 017731 234 NYGFDGQIHACWMH--KMTQKDI-QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-ERTE 308 (367)
Q Consensus 234 ~~~~~~~~~~~~~~--~~~~~~~-~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~-e~p~ 308 (367)
....+...... ....+.. ....++++|+|+|+|++|.++|++..+.+++.+ ++++++++++ ||++++ ++|+
T Consensus 391 ---~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i-P~a~l~vI~~aGH~~~v~e~p~ 466 (481)
T PLN03087 391 ---AWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV-PRARVKVIDDKDHITIVVGRQK 466 (481)
T ss_pred ---hHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC-CCCEEEEeCCCCCcchhhcCHH
Confidence 00000000000 0001112 233468999999999999999999999999987 8999999998 999885 9999
Q ss_pred HHHHHHHHHHhhh
Q 017731 309 EVNQALIDLIKAS 321 (367)
Q Consensus 309 ~~~~~i~~fl~~~ 321 (367)
++++.|.+|.+..
T Consensus 467 ~fa~~L~~F~~~~ 479 (481)
T PLN03087 467 EFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHHhhcc
Confidence 9999999999764
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.1e-29 Score=229.54 Aligned_cols=265 Identities=15% Similarity=0.181 Sum_probs=170.9
Q ss_pred cccccCCcEEEEEEecC----CCCeEEEEcCCCCCccc-hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 18 AALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
..++.+|.+++|..+++ .+++|||+||++++... |..+++.|++ +||+|+++|
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~----------------------~g~~v~~~D 122 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIAS----------------------SGYGVFAMD 122 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHh----------------------CCCEEEEec
Confidence 45667899999998863 34689999999988764 6889999987 699999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCc------eEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCC
Q 017731 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWK------QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (367)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~------~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (367)
+||||.|+.+.. ...+++++++|+.++++.+..+ +++|+||||||++++.++.++|++++++|++++......
T Consensus 123 ~~G~G~S~~~~~-~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~ 201 (349)
T PLN02385 123 YPGFGLSEGLHG-YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIAD 201 (349)
T ss_pred CCCCCCCCCCCC-CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccc
Confidence 999999986532 2358899999999999887542 799999999999999999999999999999998642211
Q ss_pred CCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhc
Q 017731 167 CCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (367)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
.. .................+..... . .. .+....+... .. ..... ...........+..... .+.
T Consensus 202 ~~--~~~~~~~~~~~~~~~~~p~~~~~-~-~~----~~~~~~~~~~-~~----~~~~~-~~~~~~~~~~~~~~~~~-~l~ 266 (349)
T PLN02385 202 DV--VPPPLVLQILILLANLLPKAKLV-P-QK----DLAELAFRDL-KK----RKMAE-YNVIAYKDKPRLRTAVE-LLR 266 (349)
T ss_pred cc--cCchHHHHHHHHHHHHCCCceec-C-CC----ccccccccCH-HH----HHHhh-cCcceeCCCcchHHHHH-HHH
Confidence 10 01111111111111110000000 0 00 0000000000 00 00000 00000000000000000 000
Q ss_pred cccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccChHH----HHHHHHHHHhh
Q 017731 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEE----VNQALIDLIKA 320 (367)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~----~~~~i~~fl~~ 320 (367)
...+....+.++++|+|+|+|++|.++|++.++.+.+.+. ++++++++++ ||.++.|+|++ +.+.|.+||++
T Consensus 267 --~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 267 --TTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred --HHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 0112235567889999999999999999999999998863 4689999998 99999999887 88889999987
Q ss_pred hc
Q 017731 321 SE 322 (367)
Q Consensus 321 ~~ 322 (367)
..
T Consensus 345 ~~ 346 (349)
T PLN02385 345 HS 346 (349)
T ss_pred hc
Confidence 64
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=3e-29 Score=221.12 Aligned_cols=248 Identities=19% Similarity=0.294 Sum_probs=163.0
Q ss_pred EEEEEEec----CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCC
Q 017731 26 KIFYRTYG----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (367)
Q Consensus 26 ~l~~~~~g----~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (367)
+++|...+ .++|+||++||++++...|..++..|.+ +|+|+++|+||||.|..
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~s~~ 58 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN-----------------------DHDIIQVDMRNHGLSPR 58 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh-----------------------CCeEEEECCCCCCCCCC
Confidence 34555532 2456899999999999999999999987 89999999999999986
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHH
Q 017731 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (367)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (367)
+. .++++++++|+.+++++++.++++++||||||.+++.+|.++|++|+++|++++.+.... ........... .
T Consensus 59 ~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~--~~~~~~~~~~~-~ 132 (255)
T PRK10673 59 DP---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH--VRRHDEIFAAI-N 132 (255)
T ss_pred CC---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc--chhhHHHHHHH-H
Confidence 54 579999999999999999999999999999999999999999999999999986532111 00000000000 0
Q ss_pred HhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcC
Q 017731 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (367)
..... ............................+. ...+.+. ....+.........+.++.++
T Consensus 133 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 195 (255)
T PRK10673 133 AVSEA-----------GATTRQQAAAIMRQHLNEEGVIQFLLKSFV----DGEWRFN--VPVLWDQYPHIVGWEKIPAWP 195 (255)
T ss_pred Hhhhc-----------ccccHHHHHHHHHHhcCCHHHHHHHHhcCC----cceeEee--HHHHHHhHHHHhCCcccCCCC
Confidence 00000 000000000000000000000000111000 0000000 000000000000012345678
Q ss_pred ccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 262 ~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+|+|+|+|++|..++.+..+.+.+.+ ++++++++++ ||++++++|+++++.|.+||++
T Consensus 196 ~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 196 HPALFIRGGNSPYVTEAYRDDLLAQF-PQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHhC-CCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999998876 8999999998 9999999999999999999975
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=2.9e-29 Score=220.81 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=165.6
Q ss_pred EEEEEecC---CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC
Q 017731 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (367)
Q Consensus 27 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (367)
++|+..|+ +.|+||++||+++++..|..+++.|.+ +|+|+++|+||||.|..+.
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~D~~G~G~S~~~~ 57 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-----------------------RFHVVTYDHRGTGRSPGEL 57 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-----------------------ccEEEEEcCCCCCCCCCCC
Confidence 46777773 567899999999999999999998886 8999999999999998654
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHh
Q 017731 104 KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFF 183 (367)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (367)
. ..++++++++++.++++.++.++++++||||||++++.++.++|++|+++|++++..... + .............
T Consensus 58 ~-~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~---~-~~~~~~~~~~~~~ 132 (257)
T TIGR03611 58 P-PGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD---P-HTRRCFDVRIALL 132 (257)
T ss_pred c-ccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC---h-hHHHHHHHHHHHH
Confidence 3 467999999999999999999999999999999999999999999999999998753210 0 0000000011111
Q ss_pred hccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCcc
Q 017731 184 RAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL 263 (367)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 263 (367)
................+...++.... ............ ............... ...+....++.+++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~P 200 (257)
T TIGR03611 133 QHAGPEAYVHAQALFLYPADWISENA------ARLAADEAHALA--HFPGKANVLRRINAL----EAFDVSARLDRIQHP 200 (257)
T ss_pred hccCcchhhhhhhhhhccccHhhccc------hhhhhhhhhccc--ccCccHHHHHHHHHH----HcCCcHHHhcccCcc
Confidence 11000000000000000000000000 000000000000 000000000000000 011123456778999
Q ss_pred EEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 264 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+++++|++|.++|++.++.+.+.+ ++++++.+++ ||++++++|+++++.|.+||++
T Consensus 201 ~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 201 VLLIANRDDMLVPYTQSLRLAAAL-PNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEEEecCcCcccCHHHHHHHHHhc-CCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999999999886 8889999987 9999999999999999999863
No 18
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=1.7e-28 Score=218.98 Aligned_cols=256 Identities=16% Similarity=0.169 Sum_probs=165.2
Q ss_pred ccccCCcEEEEEEecCC---CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC
Q 017731 19 ALNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (367)
+++.||.+++|..+.++ ++.|+++||+++++..|..+++.|.+ +||+|+++|+||
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~----------------------~g~~via~D~~G 62 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISS----------------------LGILVFSHDHIG 62 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHh----------------------CCCEEEEccCCC
Confidence 56779999999887542 34577779999999999999999987 699999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCcc
Q 017731 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL 171 (367)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (367)
||.|+.... ...++.++++|+.+.++.+ ..++++|+||||||.+++.+|.++|++++++|++++.... .. .
T Consensus 63 ~G~S~~~~~-~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~-~~---~ 137 (276)
T PHA02857 63 HGRSNGEKM-MIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA-EA---V 137 (276)
T ss_pred CCCCCCccC-CcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc-cc---c
Confidence 999975321 2236667777777777654 3468999999999999999999999999999999985321 10 0
Q ss_pred chhhHHHHHHHhhc-cChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccc-hhhhhhcccc
Q 017731 172 DLQTLSIAIRFFRA-KTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG-QIHACWMHKM 249 (367)
Q Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 249 (367)
............ ..+.... ....... ..... ... ..+ .... ......... ...... ..
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~-----~~~~~~~----~~~~~--~~~-~~~---~~~~-~~~~~~~~~~~~~~~~--~~ 197 (276)
T PHA02857 138 --PRLNLLAAKLMGIFYPNKIV-----GKLCPES----VSRDM--DEV-YKY---QYDP-LVNHEKIKAGFASQVL--KA 197 (276)
T ss_pred --cHHHHHHHHHHHHhCCCCcc-----CCCCHhh----ccCCH--HHH-HHH---hcCC-CccCCCccHHHHHHHH--HH
Confidence 000000000000 0000000 0000000 00000 000 000 0000 000000000 000000 01
Q ss_pred ChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccCh---HHHHHHHHHHHhhh
Q 017731 250 TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT---EEVNQALIDLIKAS 321 (367)
Q Consensus 250 ~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p---~~~~~~i~~fl~~~ 321 (367)
.......+.++++|+|+++|++|.++|++.++++.+.+.++++++++++ ||.++.|++ +++.+.|.+||+..
T Consensus 198 ~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 198 TNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 1122356778999999999999999999999999998755789999998 999998865 57899999999875
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=2.4e-28 Score=223.22 Aligned_cols=275 Identities=13% Similarity=0.114 Sum_probs=173.4
Q ss_pred CccccccCCcEEEEEEecC--CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC
Q 017731 16 PDAALNDNGIKIFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (367)
...++..+|.+++|..++. ++++||++||++++...|..++..|.+ +||+|+++|+
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~----------------------~g~~v~~~D~ 89 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFH----------------------LGYDVLIIDH 89 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHH----------------------CCCeEEEEcC
Confidence 4567778999999999873 456899999999999899999988877 5999999999
Q ss_pred CCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 94 RGMGRSSVPVKK----TEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 94 ~G~G~S~~~~~~----~~~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
||||.|+.+... ...+++++++|+.++++.+ +..+++++||||||.+++.++.++|++++++|+++|.....
T Consensus 90 ~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~ 169 (330)
T PRK10749 90 RGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIV 169 (330)
T ss_pred CCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccC
Confidence 999999754321 2358999999999999876 66789999999999999999999999999999998864321
Q ss_pred CCCCccchhhHHHHHHHhhccChhhhhh--cccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCcccc-ccccchhh
Q 017731 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSN-YGFDGQIH 242 (367)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (367)
...+ .............. ...... .....+....+....+. ........+.+.+........ ........
T Consensus 170 ~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PRK10749 170 LPLP---SWMARRILNWAEGH-PRIRDGYAIGTGRWRPLPFAINVLT---HSRERYRRNLRFYADDPELRVGGPTYHWVR 242 (330)
T ss_pred CCCC---cHHHHHHHHHHHHh-cCCCCcCCCCCCCCCCCCcCCCCCC---CCHHHHHHHHHHHHhCCCcccCCCcHHHHH
Confidence 1111 11111111111000 000000 00000000000000000 001111111111111110000 00000000
Q ss_pred hhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc------CCcEEEEcCC-CCcccccCh---HHHHH
Q 017731 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY------PVARMIDLPG-GHLVSHERT---EEVNQ 312 (367)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~------~~~~~~~~~g-gH~~~~e~p---~~~~~ 312 (367)
.... ........+.++++|+|+|+|++|.+++++.++.+.+.+. ++++++++++ ||.++.|.+ +++.+
T Consensus 243 ~~~~--~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~ 320 (330)
T PRK10749 243 ESIL--AGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALN 320 (330)
T ss_pred HHHH--HHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHH
Confidence 0000 0011234567789999999999999999999998888652 3568999998 999998875 67889
Q ss_pred HHHHHHhhh
Q 017731 313 ALIDLIKAS 321 (367)
Q Consensus 313 ~i~~fl~~~ 321 (367)
.|.+||++.
T Consensus 321 ~i~~fl~~~ 329 (330)
T PRK10749 321 AIVDFFNRH 329 (330)
T ss_pred HHHHHHhhc
Confidence 999999764
No 20
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.97 E-value=1.2e-28 Score=226.69 Aligned_cols=266 Identities=19% Similarity=0.215 Sum_probs=171.3
Q ss_pred ccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC
Q 017731 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (367)
..+.++.+++|...|+ +.|+|||+||++++...|+.+++.|.+ +|+|+++|+||||
T Consensus 109 ~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Via~DlpG~G 165 (383)
T PLN03084 109 QASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-----------------------NYHAIAFDWLGFG 165 (383)
T ss_pred EEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-----------------------CCEEEEECCCCCC
Confidence 4567899999999985 357899999999999999999999987 8999999999999
Q ss_pred CCCCCCCC--CCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhh
Q 017731 98 RSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (367)
Q Consensus 98 ~S~~~~~~--~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (367)
.|+.+... ..++++++++++.+++++++.++++|+|||+||++++.+|.++|++|+++|++++....... ... ..
T Consensus 166 ~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~--~~p-~~ 242 (383)
T PLN03084 166 FSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHA--KLP-ST 242 (383)
T ss_pred CCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccc--cch-HH
Confidence 99876531 35899999999999999999999999999999999999999999999999999986421100 001 00
Q ss_pred HHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccC---hH
Q 017731 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT---QK 252 (367)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 252 (367)
.......+... ...... .......+.. .............+...+..... ........... +..... ..
T Consensus 243 l~~~~~~l~~~---~~~~~~--~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~-~~~~l~~~~r~-~~~~l~~~~~~ 314 (383)
T PLN03084 243 LSEFSNFLLGE---IFSQDP--LRASDKALTS-CGPYAMKEDDAMVYRRPYLTSGS-SGFALNAISRS-MKKELKKYIEE 314 (383)
T ss_pred HHHHHHHHhhh---hhhcch--HHHHhhhhcc-cCccCCCHHHHHHHhccccCCcc-hHHHHHHHHHH-hhcccchhhHH
Confidence 11000000000 000000 0000000000 00000000001111100000000 00000000000 000000 00
Q ss_pred HHHHh--HhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 253 DIQTI--RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 253 ~~~~l--~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
....+ ..+++|+++|+|++|.+++.+.++.+++. .+++++++++ ||++++|+|+++++.|.+||.+
T Consensus 315 l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~--~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 315 MRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS--SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh--cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 11111 35789999999999999999988888885 4789999998 9999999999999999999863
No 21
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.97 E-value=8.9e-29 Score=215.69 Aligned_cols=240 Identities=17% Similarity=0.152 Sum_probs=153.3
Q ss_pred cCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHH
Q 017731 33 GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (367)
Q Consensus 33 g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (367)
|+++|+|||+||++++...|..+.+.|.+ +|+|+++|+||||.|.... .+++++
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-----------------------~~~vi~~d~~G~G~s~~~~---~~~~~~ 54 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-----------------------HFTLHLVDLPGHGRSRGFG---PLSLAD 54 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-----------------------CeEEEEecCCcCccCCCCC---CcCHHH
Confidence 45657899999999999999999999987 8999999999999987543 467888
Q ss_pred HHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCC--CC-ccchhhHHHHHHHhhccChh
Q 017731 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC--CP-KLDLQTLSIAIRFFRAKTPE 189 (367)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 189 (367)
+++++.+.++ ++++++||||||.+++.+|.++|+++.++|++++....... .+ ................ .
T Consensus 55 ~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 127 (245)
T TIGR01738 55 AAEAIAAQAP----DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD---D 127 (245)
T ss_pred HHHHHHHhCC----CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh---h
Confidence 8887766542 68999999999999999999999999999999876421110 00 0000011100000000 0
Q ss_pred hhhhcccCccccHHHHH-HHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEe
Q 017731 190 KRAAVDLDTHYSQEYLE-EYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (367)
... ....+.. .......... ....+...+........ ..+...+......+....+.++++|+++++
T Consensus 128 ~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 195 (245)
T TIGR01738 128 YQR-------TIERFLALQTLGTPTARQ-DARALKQTLLARPTPNV----QVLQAGLEILATVDLRQPLQNISVPFLRLY 195 (245)
T ss_pred HHH-------HHHHHHHHHHhcCCccch-HHHHHHHHhhccCCCCH----HHHHHHHHHhhcccHHHHHhcCCCCEEEEe
Confidence 000 0000000 0011100000 00111111100000000 001111110111223356788999999999
Q ss_pred ecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHH
Q 017731 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLI 318 (367)
Q Consensus 269 G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl 318 (367)
|++|.++|++..+.+.+.+ ++++++++++ ||++++|+|+++++.|.+|+
T Consensus 196 g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 196 GYLDGLVPAKVVPYLDKLA-PHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred ecCCcccCHHHHHHHHHhC-CCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999888876 8999999997 99999999999999999985
No 22
>PRK07581 hypothetical protein; Validated
Probab=99.97 E-value=1.1e-28 Score=226.53 Aligned_cols=275 Identities=17% Similarity=0.125 Sum_probs=164.1
Q ss_pred cccccCCcEEEEEEecC----CCCeEEEEcCCCCCccchHHhH---HhhcCCCCCCCCchhhhcccccCCCCCCCeEEEe
Q 017731 18 AALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQL---KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~---~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (367)
.-.+.+|.+++|...|+ ++|+||++||+++++..|..++ +.|.. ++|+|++
T Consensus 19 ~g~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~----------------------~~~~vi~ 76 (339)
T PRK07581 19 SGATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDP----------------------EKYFIII 76 (339)
T ss_pred CCCCcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCc----------------------CceEEEE
Confidence 34466889999999985 3356777777777777776543 35543 4899999
Q ss_pred eCCCCCCCCCCCCCC-CCCCHHH-----HHHHHHH----HHHHhCCce-EEEEEeChhHHHHHHHHHhCCcceeEEEEec
Q 017731 91 FDNRGMGRSSVPVKK-TEYTTKI-----MAKDVIA----LMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (367)
Q Consensus 91 ~D~~G~G~S~~~~~~-~~~~~~~-----~~~dl~~----~l~~~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (367)
+|+||||.|+.+... ..+++++ +++++.+ +++++++++ ++|+||||||++++.+|.++|++|+++|+++
T Consensus 77 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~ 156 (339)
T PRK07581 77 PNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIA 156 (339)
T ss_pred ecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeee
Confidence 999999999865421 1344332 4555554 778899999 4799999999999999999999999999998
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhhccCh----------h-hhh---hcccCccccHHHHHHHhCCCc---hhhHhHHHH
Q 017731 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTP----------E-KRA---AVDLDTHYSQEYLEEYVGSST---RRAILYQEY 222 (367)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 222 (367)
+.... ..............+..... . ... .......+...++........ .........
T Consensus 157 ~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (339)
T PRK07581 157 GTAKT----TPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGF 232 (339)
T ss_pred cCCCC----CHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHH
Confidence 75321 00000000001100100000 0 000 000000001111111000000 000111111
Q ss_pred HHhhhhcCccccccccchhhhhhcc----cc--ChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEc
Q 017731 223 VKGISATGMQSNYGFDGQIHACWMH----KM--TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL 296 (367)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~ 296 (367)
....... .....+...+...... .. ..+....++++++|+|+|+|++|.++|++.++.+.+.+ ++++++++
T Consensus 233 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i-p~a~l~~i 309 (339)
T PRK07581 233 WEGNFLP--RDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI-PNAELRPI 309 (339)
T ss_pred HHHhhcc--cCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEe
Confidence 1111000 0001111111111110 00 12345678889999999999999999999999998876 88999999
Q ss_pred CC--CCcccccChHHHHHHHHHHHhhh
Q 017731 297 PG--GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 297 ~g--gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
++ ||+.++++++++...|.+||++.
T Consensus 310 ~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 310 ESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CCCCCccccccCcHHHHHHHHHHHHHH
Confidence 84 99999999999999999999875
No 23
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.97 E-value=1.6e-28 Score=225.59 Aligned_cols=267 Identities=18% Similarity=0.203 Sum_probs=165.1
Q ss_pred cccccCCcEEEEEEecC-CCCeEEEEcCCCCCcc------------chHHhHH---hhcCCCCCCCCchhhhcccccCCC
Q 017731 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHD------------AWGPQLK---GLAGTDKPNDDDETILQDSVESGD 81 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~------------~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~~ 81 (367)
.....+|.+++|+..|+ +.| +||+||++++.. .|.+++. .|..
T Consensus 39 ~~~~~~~~~l~y~~~G~~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~-------------------- 97 (343)
T PRK08775 39 RHAGLEDLRLRYELIGPAGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP-------------------- 97 (343)
T ss_pred cCCCCCCceEEEEEeccCCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCc--------------------
Confidence 44566899999999996 555 777766666554 6888876 4632
Q ss_pred CCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceE-EEEEeChhHHHHHHHHHhCCcceeEEEEecc
Q 017731 82 GGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQA-HVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 82 ~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v-~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (367)
++|+|+++|+||||.|.. ..++.+++++|+.+++++++++++ +++||||||++++.+|.++|++|+++|++++
T Consensus 98 --~~~~Vi~~Dl~G~g~s~~----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s 171 (343)
T PRK08775 98 --ARFRLLAFDFIGADGSLD----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSG 171 (343)
T ss_pred --cccEEEEEeCCCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECc
Confidence 389999999999998842 256889999999999999999775 7999999999999999999999999999998
Q ss_pred CCCCCCCCCccchhhHHHHHHHhhccC------hhh---hhhcccCccccHHHHHHHhCCCch-----hhHhHHHHHHhh
Q 017731 161 TGGGFQCCPKLDLQTLSIAIRFFRAKT------PEK---RAAVDLDTHYSQEYLEEYVGSSTR-----RAILYQEYVKGI 226 (367)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 226 (367)
..... +. ........+...... ... ............+.+...+..... .......+....
T Consensus 172 ~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 246 (343)
T PRK08775 172 AHRAH---PY--AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAA 246 (343)
T ss_pred cccCC---HH--HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHH
Confidence 63210 10 000110001100000 000 000000000011111111111100 000001111000
Q ss_pred h--hcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcC-C-CCcc
Q 017731 227 S--ATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-G-GHLV 302 (367)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~-g-gH~~ 302 (367)
. .........+....... . .....+.++++|+|+|+|++|.++|++..+.+.+.+.+++++++++ + ||++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~ 320 (343)
T PRK08775 247 GAQYVARTPVNAYLRLSESI-----D-LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDA 320 (343)
T ss_pred HHHHHHhcChhHHHHHHHHH-----h-hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHH
Confidence 0 00000000000000000 0 0011256789999999999999999999999988775789999996 4 9999
Q ss_pred cccChHHHHHHHHHHHhhhc
Q 017731 303 SHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 303 ~~e~p~~~~~~i~~fl~~~~ 322 (367)
++|+|++|++.|.+||++..
T Consensus 321 ~lE~Pe~~~~~l~~FL~~~~ 340 (343)
T PRK08775 321 FLKETDRIDAILTTALRSTG 340 (343)
T ss_pred HhcCHHHHHHHHHHHHHhcc
Confidence 99999999999999998764
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.97 E-value=8.3e-29 Score=216.53 Aligned_cols=245 Identities=28% Similarity=0.400 Sum_probs=165.4
Q ss_pred EEEEEecC--CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC
Q 017731 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (367)
Q Consensus 27 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (367)
++|...|+ ++|+||++||++.+...|.++++.|.. +|+|+++|+||||.|+.+.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~- 57 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-----------------------DFRVLRYDKRGHGLSDAPE- 57 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-----------------------ccEEEEecCCCCCCCCCCC-
Confidence 67777775 567899999999999999999999986 9999999999999997654
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhh
Q 017731 105 KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFR 184 (367)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (367)
..++++++++++.++++.++.++++++||||||++++.+|.++|++|+++|++++...... ............
T Consensus 58 -~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~------~~~~~~~~~~~~ 130 (251)
T TIGR02427 58 -GPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT------PESWNARIAAVR 130 (251)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc------hhhHHHHHhhhh
Confidence 4679999999999999999989999999999999999999999999999999987532110 000000000000
Q ss_pred ccChhhhhhcccCccccHHHHHHHhCCCch--hhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCc
Q 017731 185 AKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGF 262 (367)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 262 (367)
...... ........++..... .......+...+..... ..+... +......+....+.++++
T Consensus 131 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~ 194 (251)
T TIGR02427 131 AEGLAA---------LADAVLERWFTPGFREAHPARLDLYRNMLVRQPP---DGYAGC----CAAIRDADFRDRLGAIAV 194 (251)
T ss_pred hccHHH---------HHHHHHHHHcccccccCChHHHHHHHHHHHhcCH---HHHHHH----HHHHhcccHHHHhhhcCC
Confidence 000000 000001111100000 00001111111111000 000000 000011122355678899
Q ss_pred cEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 263 LVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 263 Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
|+++++|++|.++|.+..+.+.+.+ ++.+++.+++ ||++++++|+++.+.|.+|++
T Consensus 195 Pvlii~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 195 PTLCIAGDQDGSTPPELVREIADLV-PGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CeEEEEeccCCcCChHHHHHHHHhC-CCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999999999988876 7889999996 999999999999999999974
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.96 E-value=3.7e-28 Score=215.67 Aligned_cols=254 Identities=14% Similarity=0.121 Sum_probs=167.0
Q ss_pred cCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCC
Q 017731 22 DNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (367)
Q Consensus 22 ~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (367)
.+|.+++|...++++|+|||+||++.+...|.++...|.+ +||+|+++|+||||.|..
T Consensus 4 ~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~----------------------~g~~vi~~dl~g~G~s~~ 61 (273)
T PLN02211 4 ENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMEN----------------------SGYKVTCIDLKSAGIDQS 61 (273)
T ss_pred ccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHh----------------------CCCEEEEecccCCCCCCC
Confidence 4688888888766677899999999999999999999986 599999999999998754
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhC-CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHH
Q 017731 102 PVKKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAI 180 (367)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 180 (367)
... ..++++++++++.++++.++ .++++|+||||||+++..++.++|++|+++|++++..... .........
T Consensus 62 ~~~-~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~------g~~~~~~~~ 134 (273)
T PLN02211 62 DAD-SVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKL------GFQTDEDMK 134 (273)
T ss_pred Ccc-cCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCC------CCCHHHHHh
Confidence 332 24799999999999999985 5799999999999999999999999999999998753210 000000000
Q ss_pred HHhhcc---Chh----hhh---hcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccC
Q 017731 181 RFFRAK---TPE----KRA---AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (367)
Q Consensus 181 ~~~~~~---~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
...... ... ... ..........++....+....... . ..+........ ....+. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~-----------~ 199 (273)
T PLN02211 135 DGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQE-D-STLAAMLLRPG--PILALR-----------S 199 (273)
T ss_pred ccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHH-H-HHHHHHhcCCc--Cccccc-----------c
Confidence 000000 000 000 000000111222222222111110 0 11111111000 000000 0
Q ss_pred hHHHHHhHhc-CccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 017731 251 QKDIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 251 ~~~~~~l~~i-~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~ 320 (367)
....+....+ ++|+++|.|++|..+|++..+.+.+.+ +..+++.+++||.+++++|+++.+.|.++...
T Consensus 200 ~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~-~~~~~~~l~~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 200 ARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW-PPSQVYELESDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC-CccEEEEECCCCCccccCHHHHHHHHHHHHHH
Confidence 0000112233 689999999999999999999999986 77789999889999999999999999988765
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=2.2e-28 Score=220.30 Aligned_cols=264 Identities=24% Similarity=0.267 Sum_probs=167.1
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.+|+||++|||+++...|+.++..|.+. .|+.|+++|++|+|.++..+....|+..+++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~---------------------~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v 115 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKA---------------------KGLRVLAIDLPGHGYSSPLPRGPLYTLRELV 115 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccc---------------------cceEEEEEecCCCCcCCCCCCCCceehhHHH
Confidence 3668999999999999999999999982 2599999999999966655555679999999
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhc
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (367)
+.+..++...+.++++++|||+||.+|+.+|+.+|+.|+++++++-........+............+............
T Consensus 116 ~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 195 (326)
T KOG1454|consen 116 ELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSL 195 (326)
T ss_pred HHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCcccc
Confidence 99999999999999999999999999999999999999999955422111111111111111111111100000000000
Q ss_pred -ccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcC--ccccccccchhhhhhccccChHHHHHhHhcC-ccEEEEeec
Q 017731 195 -DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATG--MQSNYGFDGQIHACWMHKMTQKDIQTIRSAG-FLVSVIHGR 270 (367)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~Pvlii~G~ 270 (367)
.....+...................+.......... ......+.......... .......++++. ||+|+++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~pvlii~G~ 273 (326)
T KOG1454|consen 196 TEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF--DENLLSLIKKIWKCPVLIIWGD 273 (326)
T ss_pred ccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc--cchHHHhhccccCCceEEEEcC
Confidence 000011111111111111111111111111111110 00000000000000000 123334556666 999999999
Q ss_pred CCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 271 ~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
+|+++|.+.+..+.+++ ++++++++++ ||.+++|.|+++++.|..|+....
T Consensus 274 ~D~~~p~~~~~~~~~~~-pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 274 KDQIVPLELAEELKKKL-PNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred cCCccCHHHHHHHHhhC-CCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 99999999999999997 9999999997 999999999999999999998753
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.96 E-value=4.4e-28 Score=223.42 Aligned_cols=269 Identities=20% Similarity=0.198 Sum_probs=166.3
Q ss_pred ccccCCcEEEEEEecC----CCCeEEEEcCCCCCcc-----------chHHhHH---hhcCCCCCCCCchhhhcccccCC
Q 017731 19 ALNDNGIKIFYRTYGR----GPTKVILITGLAGTHD-----------AWGPQLK---GLAGTDKPNDDDETILQDSVESG 80 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~-----------~~~~~~~---~L~~~~~~~~~~~~~~~~~~~~~ 80 (367)
-.+.+|.+++|..+|. +.|+||++||+++++. .|..++. .|..
T Consensus 10 g~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~------------------- 70 (351)
T TIGR01392 10 GGVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT------------------- 70 (351)
T ss_pred CCccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-------------------
Confidence 4467899999999984 3568999999999763 3666652 3322
Q ss_pred CCCCCeEEEeeCCCC--CCCCCCCC----C------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEeChhHHHHHHHHHh
Q 017731 81 DGGAGIEVCAFDNRG--MGRSSVPV----K------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 81 ~~~~g~~vi~~D~~G--~G~S~~~~----~------~~~~~~~~~~~dl~~~l~~~~~~~-v~lvGhS~Gg~~a~~~a~~ 147 (367)
++|+|+++|+|| ||.|.... . ...++++++++++.+++++++.++ ++++||||||++++.+|.+
T Consensus 71 ---~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~ 147 (351)
T TIGR01392 71 ---DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAID 147 (351)
T ss_pred ---CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHH
Confidence 599999999999 56554311 0 125789999999999999999998 9999999999999999999
Q ss_pred CCcceeEEEEeccCCCCCCCCCccchhh--HHH-HHHHhhccCh-h------------hh---hhcccCccccHHHHHHH
Q 017731 148 VPERVLSLALLNVTGGGFQCCPKLDLQT--LSI-AIRFFRAKTP-E------------KR---AAVDLDTHYSQEYLEEY 208 (367)
Q Consensus 148 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~-~------------~~---~~~~~~~~~~~~~~~~~ 208 (367)
+|++|+++|++++... ..... ... ....+..... . .. ...........+.+...
T Consensus 148 ~p~~v~~lvl~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 220 (351)
T TIGR01392 148 YPERVRAIVVLATSAR-------HSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAER 220 (351)
T ss_pred ChHhhheEEEEccCCc-------CCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999999998631 11111 100 0011110000 0 00 00000000111112222
Q ss_pred hCCCchhh----------HhHHHHHHh----hhhcCccccccccchhhhhhccccC---hHHHHHhHhcCccEEEEeecC
Q 017731 209 VGSSTRRA----------ILYQEYVKG----ISATGMQSNYGFDGQIHACWMHKMT---QKDIQTIRSAGFLVSVIHGRH 271 (367)
Q Consensus 209 ~~~~~~~~----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~i~~Pvlii~G~~ 271 (367)
+....... ...+.+... +..... ...+............. .+..+.++++++|+|+|+|++
T Consensus 221 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~ 298 (351)
T TIGR01392 221 FGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFD--ANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITS 298 (351)
T ss_pred hCcCcccccccccccCccchHHHHHHHHHHHHHhhcC--cchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCC
Confidence 21111000 000111100 000000 00000001111111110 233577889999999999999
Q ss_pred CccCcHHHHHHHHHHhcCCcEEE-----EcCC-CCcccccChHHHHHHHHHHHh
Q 017731 272 DVIAQICYARRLAEKLYPVARMI-----DLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 272 D~~~p~~~~~~~~~~~~~~~~~~-----~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
|.++|++.++.+.+.+ ++++++ ++++ ||++++++|+++++.|.+||+
T Consensus 299 D~~~p~~~~~~~a~~i-~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 299 DWLFPPAESRELAKAL-PAAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred ccccCHHHHHHHHHHH-hhcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 9999999999999987 666654 4566 999999999999999999985
No 28
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=2.4e-27 Score=217.03 Aligned_cols=265 Identities=15% Similarity=0.157 Sum_probs=165.8
Q ss_pred cccccCCcEEEEEEecC-----CCCeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEee
Q 017731 18 AALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (367)
.+...||.+++|+.++. .+++|||+||++.+. ..|..+...|.+ +||+|+++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~----------------------~Gy~V~~~ 93 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ----------------------MGFACFAL 93 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh----------------------CCCEEEEe
Confidence 45567999999988752 234699999998764 356777778887 69999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~------~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
|+||||.|+.... ...+++.+++|+.++++.+.. .+++|+||||||.+++.++.++|++|+++|++++.....
T Consensus 94 D~rGhG~S~~~~~-~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 94 DLEGHGRSEGLRA-YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred cCCCCCCCCCccc-cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 9999999975432 245788999999999998743 369999999999999999999999999999999864322
Q ss_pred CCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhh
Q 017731 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (367)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
..... .. .............+..... .... .+. ...... ....+.. ......... ..........
T Consensus 173 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~-~~~~-----~~~----~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 237 (330)
T PLN02298 173 DKIRP-PW-PIPQILTFVARFLPTLAIV-PTAD-----LLE----KSVKVP-AKKIIAK-RNPMRYNGK-PRLGTVVELL 237 (330)
T ss_pred cccCC-ch-HHHHHHHHHHHHCCCCccc-cCCC-----ccc----ccccCH-HHHHHHH-hCccccCCC-ccHHHHHHHH
Confidence 11100 00 0111111111000000000 0000 000 000000 0000000 000000000 0000000000
Q ss_pred ccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccChH----HHHHHHHHHHh
Q 017731 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTE----EVNQALIDLIK 319 (367)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~----~~~~~i~~fl~ 319 (367)
. ........+..+++|+|+|+|++|.++|++.++.+++.+. ++++++++++ ||.+++++|+ ++.+.|.+||+
T Consensus 238 ~--~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~ 315 (330)
T PLN02298 238 R--VTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLN 315 (330)
T ss_pred H--HHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHH
Confidence 0 0112235677889999999999999999999999988763 4789999998 9999998875 46778888998
Q ss_pred hhc
Q 017731 320 ASE 322 (367)
Q Consensus 320 ~~~ 322 (367)
+..
T Consensus 316 ~~~ 318 (330)
T PLN02298 316 ERC 318 (330)
T ss_pred Hhc
Confidence 864
No 29
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=2.9e-28 Score=209.64 Aligned_cols=224 Identities=30% Similarity=0.435 Sum_probs=153.0
Q ss_pred EEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017731 39 VILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (367)
Q Consensus 39 vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (367)
|||+||++++...|.++++.|++ ||+|+++|+||+|.|+.+.....++++++++++.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~ 57 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALAR-----------------------GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLA 57 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHT-----------------------TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEecCCccccccccccCCcchhhhhhhhh
Confidence 79999999999999999999975 9999999999999998766434678999999999
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCc
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDT 198 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (367)
+++++++.++++++|||+||.+++.++.++|++|+++|++++....... ............+..........
T Consensus 58 ~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----- 129 (228)
T PF12697_consen 58 ELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDS---PSRSFGPSFIRRLLAWRSRSLRR----- 129 (228)
T ss_dssp HHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHH---HCHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred hcccccccccccccccccccccccccccccccccccceeeccccccccc---ccccccchhhhhhhhcccccccc-----
Confidence 9999999999999999999999999999999999999999987311000 00000001111000000000000
Q ss_pred cccHHHHHHHhCCCchhhH---hHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccC
Q 017731 199 HYSQEYLEEYVGSSTRRAI---LYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIA 275 (367)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~ 275 (367)
.....+............ ..+.+.+.+... ....+....++.+++|+++++|++|.++
T Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~pvl~i~g~~D~~~ 190 (228)
T PF12697_consen 130 -LASRFFYRWFDGDEPEDLIRSSRRALAEYLRSN------------------LWQADLSEALPRIKVPVLVIHGEDDPIV 190 (228)
T ss_dssp -HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHGSSSEEEEEEETTSSSS
T ss_pred -ccccccccccccccccccccccccccccccccc------------------cccccccccccccCCCeEEeecCCCCCC
Confidence 000111111100000000 000011100000 0112334677888999999999999999
Q ss_pred cHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHH
Q 017731 276 QICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (367)
Q Consensus 276 p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~ 313 (367)
+.+..+.+.+.+ ++++++++++ ||++++++|++++++
T Consensus 191 ~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 191 PPESAEELADKL-PNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHS-TTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred CHHHHHHHHHHC-CCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999876 8999999997 999999999999864
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=8.5e-28 Score=210.24 Aligned_cols=236 Identities=16% Similarity=0.154 Sum_probs=148.2
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
++|+|||+||++++...|.++++.| + +|+|+++|+||||.|+.+. ..++++++
T Consensus 1 ~~p~vvllHG~~~~~~~w~~~~~~l-~-----------------------~~~vi~~D~~G~G~S~~~~---~~~~~~~~ 53 (242)
T PRK11126 1 GLPWLVFLHGLLGSGQDWQPVGEAL-P-----------------------DYPRLYIDLPGHGGSAAIS---VDGFADVS 53 (242)
T ss_pred CCCEEEEECCCCCChHHHHHHHHHc-C-----------------------CCCEEEecCCCCCCCCCcc---ccCHHHHH
Confidence 3567999999999999999999987 4 7999999999999998664 34899999
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcc-eeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhh
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (367)
+++.+++++++.++++++||||||.+++.+|.++|+. |++++++++... ........ ...... ......
T Consensus 54 ~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~-------~~~~~~~~-~~~~~~--~~~~~~ 123 (242)
T PRK11126 54 RLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPG-------LQNAEERQ-ARWQND--RQWAQR 123 (242)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCC-------CCCHHHHH-HHHhhh--HHHHHH
Confidence 9999999999999999999999999999999999764 999999886531 11000000 000000 000000
Q ss_pred cccCccccHHHHHHHhCCCc---hhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeec
Q 017731 194 VDLDTHYSQEYLEEYVGSST---RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGR 270 (367)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~ 270 (367)
. ........+..++.... ........+....... ........... .......+..+.+.++++|+++|+|+
T Consensus 124 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~l~~i~~P~lii~G~ 197 (242)
T PRK11126 124 F--RQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRSNN---NGAAVAAMLEA-TSLAKQPDLRPALQALTFPFYYLCGE 197 (242)
T ss_pred h--ccCcHHHHHHHHHhcchhhccCccHHHHHHHhcccC---CHHHHHHHHHh-cCcccCCcHHHHhhccCCCeEEEEeC
Confidence 0 00000111111110000 0000000110000000 00000000000 00001123345678899999999999
Q ss_pred CCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 271 HDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 271 ~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+|..+. .+.+. .+++++++++ ||+++.|+|+++++.|.+|+++
T Consensus 198 ~D~~~~-----~~~~~--~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 198 RDSKFQ-----ALAQQ--LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CcchHH-----HHHHH--hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 998652 23333 3789999998 9999999999999999999975
No 31
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.4e-27 Score=221.74 Aligned_cols=287 Identities=18% Similarity=0.186 Sum_probs=168.4
Q ss_pred cccccCCcEEEEEEecC----CCCeEEEEcCCCCCccchHHh---------HHhhcCCCCCCCCchhhhcccccCCCCCC
Q 017731 18 AALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQ---------LKGLAGTDKPNDDDETILQDSVESGDGGA 84 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~---------~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (367)
.-.+.+|.+++|..+|. ++|+|||+||+++++..|..+ ++.+....++ +...
T Consensus 26 ~g~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~---------------l~~~ 90 (379)
T PRK00175 26 SGAVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKP---------------IDTD 90 (379)
T ss_pred CCCCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCc---------------cCcc
Confidence 34566788999999985 257899999999999754321 2222110000 1114
Q ss_pred CeEEEeeCCCCC-CCCCCCCC------------CCCCCHHHHHHHHHHHHHHhCCce-EEEEEeChhHHHHHHHHHhCCc
Q 017731 85 GIEVCAFDNRGM-GRSSVPVK------------KTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 85 g~~vi~~D~~G~-G~S~~~~~------------~~~~~~~~~~~dl~~~l~~~~~~~-v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
+|+|+++|++|+ |.|+.+.. ...++++++++++.++++++++++ ++++||||||++++.+|.++|+
T Consensus 91 ~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~ 170 (379)
T PRK00175 91 RYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPD 170 (379)
T ss_pred ceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChH
Confidence 999999999983 54543220 025799999999999999999999 5899999999999999999999
Q ss_pred ceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccC-------------hhhhh-hc---ccCccccHHHHHHHhCCCc
Q 017731 151 RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT-------------PEKRA-AV---DLDTHYSQEYLEEYVGSST 213 (367)
Q Consensus 151 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 213 (367)
+|+++|++++...... ................. +.... .. ..........+...+....
T Consensus 171 ~v~~lvl~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~ 246 (379)
T PRK00175 171 RVRSALVIASSARLSA----QNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGREL 246 (379)
T ss_pred hhhEEEEECCCcccCH----HHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccc
Confidence 9999999997632110 00000000011110000 00000 00 0000000111111111100
Q ss_pred hhh---------HhHHHHHHhhhh--cCccccccccchhhhhhcccc----ChHHHHHhHhcCccEEEEeecCCccCcHH
Q 017731 214 RRA---------ILYQEYVKGISA--TGMQSNYGFDGQIHACWMHKM----TQKDIQTIRSAGFLVSVIHGRHDVIAQIC 278 (367)
Q Consensus 214 ~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlii~G~~D~~~p~~ 278 (367)
... ...+.+...... ........+............ ..+..+.++++++|+|+|+|++|.++|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~ 326 (379)
T PRK00175 247 QSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPA 326 (379)
T ss_pred cccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHH
Confidence 000 000111100000 000000000000111100000 01245778899999999999999999999
Q ss_pred HHHHHHHHhcCCc----EEEEcC-C-CCcccccChHHHHHHHHHHHhhhccC
Q 017731 279 YARRLAEKLYPVA----RMIDLP-G-GHLVSHERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 279 ~~~~~~~~~~~~~----~~~~~~-g-gH~~~~e~p~~~~~~i~~fl~~~~~~ 324 (367)
.++.+.+.+ +++ ++++++ + ||++++|+|+++++.|.+||++....
T Consensus 327 ~~~~la~~i-~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~~~ 377 (379)
T PRK00175 327 RSREIVDAL-LAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAARE 377 (379)
T ss_pred HHHHHHHHH-HhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhhhc
Confidence 999999987 555 777774 6 99999999999999999999987543
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=5.5e-27 Score=209.57 Aligned_cols=268 Identities=18% Similarity=0.235 Sum_probs=163.7
Q ss_pred cccccCCcEEEEEEecC-C-CCeEEEEcCCCCCcc-chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 18 AALNDNGIKIFYRTYGR-G-PTKVILITGLAGTHD-AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~-~-~p~vv~lHG~~~~~~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
.+++.++.++.|...+. + +++|||+||++++.. .|..+...+.+ .||+|+++|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~----------------------~g~~vi~~d~~ 62 (288)
T TIGR01250 5 GIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKE----------------------EGREVIMYDQL 62 (288)
T ss_pred ceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHh----------------------cCCEEEEEcCC
Confidence 35677888888888763 3 467999999866654 45555555554 48999999999
Q ss_pred CCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccch
Q 017731 95 GMGRSSVPVKKT-EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (367)
Q Consensus 95 G~G~S~~~~~~~-~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (367)
|||.|..+.... .++++++++++.+++++++.++++++||||||.+++.+|.++|+++.++|++++.... +....
T Consensus 63 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~----~~~~~ 138 (288)
T TIGR01250 63 GCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSA----PEYVK 138 (288)
T ss_pred CCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccc----hHHHH
Confidence 999998654322 3789999999999999999999999999999999999999999999999999875311 10000
Q ss_pred hhHHHHHHHhhccChhhhhhcccCc-cccH---HHHHHHh----CCCchhhHhHHHHHHhhhhc---Cccccccccchhh
Q 017731 174 QTLSIAIRFFRAKTPEKRAAVDLDT-HYSQ---EYLEEYV----GSSTRRAILYQEYVKGISAT---GMQSNYGFDGQIH 242 (367)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 242 (367)
........+............... .... .....+. .................... .+.....+. ..
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 215 (288)
T TIGR01250 139 -ELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFT--IT 215 (288)
T ss_pred -HHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccc--cc
Confidence 000000000000000000000000 0000 0011100 00000000000000000000 000000000 00
Q ss_pred hhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 243 ACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 243 ~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
......+....+..+++|+++++|++|.+ +++..+.+.+.+ ++++++++++ ||+++.|+|+++++.|.+||+
T Consensus 216 ---~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 216 ---GNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI-AGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ---ccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc-cCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 00011123456788999999999999985 567788888876 7889999987 999999999999999999984
No 33
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=9e-27 Score=201.95 Aligned_cols=261 Identities=21% Similarity=0.202 Sum_probs=162.4
Q ss_pred CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCC--CCCCHH
Q 017731 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTK 111 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (367)
..++++|++||+|++...|-.-.+.|++ .++|+++|++|+|+|+.|.-. ......
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La~-----------------------~~~vyaiDllG~G~SSRP~F~~d~~~~e~ 144 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLAK-----------------------IRNVYAIDLLGFGRSSRPKFSIDPTTAEK 144 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhhh-----------------------cCceEEecccCCCCCCCCCCCCCcccchH
Confidence 3456799999999999999999999997 899999999999999987632 223356
Q ss_pred HHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCC-CCcc----chhhHHHHHHHhhcc
Q 017731 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC-CPKL----DLQTLSIAIRFFRAK 186 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~ 186 (367)
.+++-++++....++++.+|+|||+||+++..||.+||++|+.|||++|.+..... .... ...............
T Consensus 145 ~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 224 (365)
T KOG4409|consen 145 EFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNF 224 (365)
T ss_pred HHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcC
Confidence 78899999999999999999999999999999999999999999999998755433 1110 000111111122222
Q ss_pred Chhhhhh--cccCccccHHHHHHHhCCCc--hhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcC-
Q 017731 187 TPEKRAA--VDLDTHYSQEYLEEYVGSST--RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG- 261 (367)
Q Consensus 187 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~- 261 (367)
.+..... ..........+..+.+.... ...+..-++.-............+...+... .-......+.+..++
T Consensus 225 nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~--g~Ar~Pm~~r~~~l~~ 302 (365)
T KOG4409|consen 225 NPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPG--GWARRPMIQRLRELKK 302 (365)
T ss_pred CHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhcc--chhhhhHHHHHHhhcc
Confidence 2211111 11111111222222111111 0111111111111111111111111000000 001223446666665
Q ss_pred -ccEEEEeecCCccCcHHHHHHHHHHh-cCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 262 -FLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 262 -~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
||+++|+|++|-+- .....++.+.+ ...++.+++++ ||++++++|+.|++.+..+++.
T Consensus 303 ~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 303 DVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 99999999998664 34444444432 34689999998 9999999999999999999875
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=1e-26 Score=202.95 Aligned_cols=241 Identities=20% Similarity=0.251 Sum_probs=154.1
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
|+||++||++++...|.++++.|.+ ||+|+++|+||+|.|+.+.....+++++.+++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~~-----------------------~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~ 58 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLGP-----------------------HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQD 58 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhcc-----------------------cCeEEEEcCCCCCCCCCCCccChhhHHHHHHH
Confidence 6799999999999999999999986 99999999999999987654456789999999
Q ss_pred -HHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccch-hhHHHHHHHhhccChhhhhhc
Q 017731 117 -VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL-QTLSIAIRFFRAKTPEKRAAV 194 (367)
Q Consensus 117 -l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 194 (367)
+..+++.++.++++++|||+||.+++.+|.++|+.|++++++++............. .........+....
T Consensus 59 ~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 131 (251)
T TIGR03695 59 ILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEG------- 131 (251)
T ss_pred HHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcC-------
Confidence 788888888899999999999999999999999999999999875321110000000 00000000000000
Q ss_pred ccCccccHHHHHHHhCCC------chhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEe
Q 017731 195 DLDTHYSQEYLEEYVGSS------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (367)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (367)
...+...+.... .........+....... ........+... .........+.+..+++|+++++
T Consensus 132 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~ 201 (251)
T TIGR03695 132 ------LEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLAN---NPEGLAKMLRAT-GLGKQPSLWPKLQALTIPVLYLC 201 (251)
T ss_pred ------ccHHHHHHhcCceeeecccCChHHhHHHHHhcccc---cchHHHHHHHHh-hhhcccchHHHhhCCCCceEEEe
Confidence 000000000000 00000000010000000 000000000000 00001122345677899999999
Q ss_pred ecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 269 G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
|++|..++ +..+.+.+.. ++++++.+++ ||++++++|+++++.|.+|++
T Consensus 202 g~~D~~~~-~~~~~~~~~~-~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 202 GEKDEKFV-QIAKEMQKLL-PNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred eCcchHHH-HHHHHHHhcC-CCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 99998764 5566676664 8899999998 999999999999999999984
No 35
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.95 E-value=5.4e-26 Score=211.53 Aligned_cols=255 Identities=28% Similarity=0.376 Sum_probs=167.1
Q ss_pred cccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC
Q 017731 18 AALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (367)
..+..++.+++|...|+ ..|+|||+||++++...|..+...|.+ +|+|+++|+|||
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~-----------------------~~~v~~~d~~g~ 168 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAA-----------------------GRPVIALDLPGH 168 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhc-----------------------CCEEEEEcCCCC
Confidence 35566788899998885 356899999999999999999999987 799999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhH
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTL 176 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 176 (367)
|.|.... ...+++++++++.++++.++.++++++|||+||.+++.+|.++|+++.++|++++...... ......
T Consensus 169 G~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~----~~~~~~ 242 (371)
T PRK14875 169 GASSKAV--GAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPE----INGDYI 242 (371)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcc----cchhHH
Confidence 9996543 3568999999999999999989999999999999999999999999999999987632111 000000
Q ss_pred HHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCc-hhhHhHHHHHHhhhhcCccccccccchhhhhhcc-ccChHHH
Q 017731 177 SIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMH-KMTQKDI 254 (367)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 254 (367)
. .+........ ....+...+.... ................... ..+.......+.. ....+..
T Consensus 243 ~---~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 307 (371)
T PRK14875 243 D---GFVAAESRRE----------LKPVLELLFADPALVTRQMVEDLLKYKRLDGVD--DALRALADALFAGGRQRVDLR 307 (371)
T ss_pred H---HhhcccchhH----------HHHHHHHHhcChhhCCHHHHHHHHHHhccccHH--HHHHHHHHHhccCcccchhHH
Confidence 0 0000000000 0000111110000 0000000000000000000 0000000000000 0112333
Q ss_pred HHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 255 QTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 255 ~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
..+.++++|+++++|++|.++|++.++. +..+.+++++++ ||++++++|+++++.|.+||++
T Consensus 308 ~~l~~i~~Pvlii~g~~D~~vp~~~~~~----l~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 308 DRLASLAIPVLVIWGEQDRIIPAAHAQG----LPDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred HHHhcCCCCEEEEEECCCCccCHHHHhh----ccCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 5677889999999999999999876543 335788999997 9999999999999999999975
No 36
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=206.56 Aligned_cols=282 Identities=15% Similarity=0.143 Sum_probs=179.2
Q ss_pred cccCCcEEEEEEecC----CCCeEEEEcCCCCCccch---------HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCe
Q 017731 20 LNDNGIKIFYRTYGR----GPTKVILITGLAGTHDAW---------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (367)
Q Consensus 20 ~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~---------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (367)
.++...+|+|+++|+ +.++||++|++++++..- ..+.+.|....+++|+ ..|
T Consensus 36 ~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt---------------~~y 100 (389)
T PRK06765 36 RTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDT---------------NKY 100 (389)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCC---------------Cce
Confidence 345678999999995 346899999999865321 2345777777888998 899
Q ss_pred EEEeeCCCCCCCCCCC-----------C--------CCCCCCHHHHHHHHHHHHHHhCCceEE-EEEeChhHHHHHHHHH
Q 017731 87 EVCAFDNRGMGRSSVP-----------V--------KKTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAA 146 (367)
Q Consensus 87 ~vi~~D~~G~G~S~~~-----------~--------~~~~~~~~~~~~dl~~~l~~~~~~~v~-lvGhS~Gg~~a~~~a~ 146 (367)
.||++|..|-|.|..| + +...++++++++++.++++++++++++ ++||||||++++++|.
T Consensus 101 fvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~ 180 (389)
T PRK06765 101 FVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAV 180 (389)
T ss_pred EEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHH
Confidence 9999999998764322 0 123479999999999999999999986 9999999999999999
Q ss_pred hCCcceeEEEEeccCCCCCCCCCccc-hhhHHHHHHHhhccC------------h----hhhhhcccCccccHHHHHHHh
Q 017731 147 MVPERVLSLALLNVTGGGFQCCPKLD-LQTLSIAIRFFRAKT------------P----EKRAAVDLDTHYSQEYLEEYV 209 (367)
Q Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~----~~~~~~~~~~~~~~~~~~~~~ 209 (367)
++|++|+++|++++..... + .. ..........+.... + ............+.+++...+
T Consensus 181 ~~P~~v~~lv~ia~~~~~~---~-~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f 256 (389)
T PRK06765 181 HYPHMVERMIGVIGNPQND---A-WTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTF 256 (389)
T ss_pred HChHhhheEEEEecCCCCC---h-hHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHc
Confidence 9999999999998763110 0 10 001111111111110 0 000000111122233332222
Q ss_pred CCCc----------hhhHhHHHHHHhhhh--cCccccccccchhhhhhcccc---ChHHHHHhHhcCccEEEEeecCCcc
Q 017731 210 GSST----------RRAILYQEYVKGISA--TGMQSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVI 274 (367)
Q Consensus 210 ~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~ 274 (367)
.... ......+.++..... ........+.....++..... ..+..+.+..+++|+|+|+|++|.+
T Consensus 257 ~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l 336 (389)
T PRK06765 257 PRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLL 336 (389)
T ss_pred CcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCC
Confidence 2110 000111222222110 001111111111111111111 1134567889999999999999999
Q ss_pred CcHHHHHHHHHHhc---CCcEEEEcC-C-CCcccccChHHHHHHHHHHHhh
Q 017731 275 AQICYARRLAEKLY---PVARMIDLP-G-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 275 ~p~~~~~~~~~~~~---~~~~~~~~~-g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+|++.++.+.+.+. +++++++++ + ||..++++|+++++.|.+||++
T Consensus 337 ~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 337 QPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99999999988873 368999997 4 9999999999999999999976
No 37
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=1.5e-25 Score=202.87 Aligned_cols=120 Identities=26% Similarity=0.322 Sum_probs=98.9
Q ss_pred ccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC
Q 017731 19 ALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (367)
+...+|.+++|...|+ +.++||++||++++...+ .+...+.. .+|+|+++|+||||
T Consensus 9 ~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~----------------------~~~~vi~~D~~G~G 65 (306)
T TIGR01249 9 LNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDP----------------------ETYRIVLFDQRGCG 65 (306)
T ss_pred EEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCc----------------------cCCEEEEECCCCCC
Confidence 3344689999999885 245699999988776543 34444433 48999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 98 RSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.|+.+.....++.+++++|+..++++++.++++++||||||.+++.++.++|++|+++|++++.
T Consensus 66 ~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 66 KSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 9986543235678899999999999999999999999999999999999999999999999875
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=3.4e-25 Score=206.73 Aligned_cols=273 Identities=18% Similarity=0.165 Sum_probs=159.6
Q ss_pred EEEEEEec--CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC
Q 017731 26 KIFYRTYG--RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (367)
Q Consensus 26 ~l~~~~~g--~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (367)
++.+.... .++|+|||+||++++...|...++.|.+ +|+|+++|+||||.|+.+.
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~~~~~~~~~~L~~-----------------------~~~vi~~D~rG~G~S~~~~ 149 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQGFFFRNFDALAS-----------------------RFRVIAIDQLGWGGSSRPD 149 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcchhHHHHHHHHHHh-----------------------CCEEEEECCCCCCCCCCCC
Confidence 55554443 2457899999999999999999999987 8999999999999998654
Q ss_pred CCCCCC----HHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchh-----
Q 017731 104 KKTEYT----TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ----- 174 (367)
Q Consensus 104 ~~~~~~----~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~----- 174 (367)
.. ..+ .+.+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++.+............
T Consensus 150 ~~-~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 228 (402)
T PLN02894 150 FT-CKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRA 228 (402)
T ss_pred cc-cccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcch
Confidence 21 111 22456778888888898999999999999999999999999999999998764322111100000
Q ss_pred hH-HHHHHHh--hccChhhhhhccc--CccccHHHHHHHhCCCc----hhhHhHHHHHHhhhhcCcccccc--ccchhhh
Q 017731 175 TL-SIAIRFF--RAKTPEKRAAVDL--DTHYSQEYLEEYVGSST----RRAILYQEYVKGISATGMQSNYG--FDGQIHA 243 (367)
Q Consensus 175 ~~-~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 243 (367)
.. ......+ ....+........ .......+....+.... ........+.+.+.......... ....+..
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (402)
T PLN02894 229 TWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFS 308 (402)
T ss_pred hHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhcc
Confidence 00 0000000 0000100000000 00000111111111000 00000011111110000000000 0000000
Q ss_pred hhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
.......+....+..+++|+++|+|++|.+.+ .....+.+...+.++++++++ ||+++.|+|++|++.|.+|++...
T Consensus 309 -~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 309 -FGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred -CchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhc
Confidence 00001223345678889999999999998776 555556655544688999998 999999999999999999999876
Q ss_pred cC
Q 017731 323 KK 324 (367)
Q Consensus 323 ~~ 324 (367)
..
T Consensus 387 ~~ 388 (402)
T PLN02894 387 SP 388 (402)
T ss_pred cC
Confidence 54
No 39
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=3.8e-25 Score=204.85 Aligned_cols=258 Identities=19% Similarity=0.205 Sum_probs=162.9
Q ss_pred ccCCcEEEEEEecC----CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC
Q 017731 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (367)
Q Consensus 21 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (367)
..++..+++..+.+ .+++||++||++++...|..+++.|.+ +||+|+++|+|||
T Consensus 117 ~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~----------------------~Gy~V~~~D~rGh 174 (395)
T PLN02652 117 GARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTS----------------------CGFGVYAMDWIGH 174 (395)
T ss_pred CCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHH----------------------CCCEEEEeCCCCC
Confidence 44567787777643 345899999999999899999999987 6999999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ceEEEEEeChhHHHHHHHHHhCCc---ceeEEEEeccCCCCCCCCC
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCP 169 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~ 169 (367)
|.|+.... ...+++.+++|+.++++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|..... +
T Consensus 175 G~S~~~~~-~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~---~ 249 (395)
T PLN02652 175 GGSDGLHG-YVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVK---P 249 (395)
T ss_pred CCCCCCCC-CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccc---c
Confidence 99986542 345788889999999988743 37999999999999998765 554 899999998753211 0
Q ss_pred ccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhc-cc
Q 017731 170 KLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWM-HK 248 (367)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 248 (367)
. ...............+........... .............+ ....... +... ...... ..
T Consensus 250 ~--~~~~~~~~~l~~~~~p~~~~~~~~~~~---------~~~s~~~~~~~~~~----~dp~~~~--g~i~-~~~~~~~~~ 311 (395)
T PLN02652 250 A--HPIVGAVAPIFSLVAPRFQFKGANKRG---------IPVSRDPAALLAKY----SDPLVYT--GPIR-VRTGHEILR 311 (395)
T ss_pred c--hHHHHHHHHHHHHhCCCCcccCccccc---------CCcCCCHHHHHHHh----cCCCccc--CCch-HHHHHHHHH
Confidence 0 000001111111100000000000000 00000000000000 0000000 0000 000000 00
Q ss_pred cChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCccccc-ChHHHHHHHHHHHhhhcc
Q 017731 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKASEK 323 (367)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e-~p~~~~~~i~~fl~~~~~ 323 (367)
........+.++++|+|+++|++|.++|++.++.+++.+. ++.+++++++ +|.++.| +++++.+.|.+||+....
T Consensus 312 ~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 312 ISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 0111235567889999999999999999999999998863 3578999998 9998877 799999999999998653
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=3.9e-25 Score=197.27 Aligned_cols=272 Identities=21% Similarity=0.231 Sum_probs=172.9
Q ss_pred CCccccccCCcEEEEEEecCC-C--CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEee
Q 017731 15 APDAALNDNGIKIFYRTYGRG-P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF 91 (367)
Q Consensus 15 ~~~~~~~~~g~~l~~~~~g~~-~--p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~ 91 (367)
....+...+|.+++|..+... + .+||++||++.+...|..++..|.. +||.|+++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~----------------------~G~~V~~~ 67 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAA----------------------RGFDVYAL 67 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHh----------------------CCCEEEEe
Confidence 345677889999999998643 2 4799999999999999999999999 79999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCC
Q 017731 92 DNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQC 167 (367)
Q Consensus 92 D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~ 167 (367)
|+||||.|........-+++++.+|+.++++... ..+++++||||||.+++.++.+++..|+++|+.+|......
T Consensus 68 D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~- 146 (298)
T COG2267 68 DLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG- 146 (298)
T ss_pred cCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh-
Confidence 9999999973222234458999999999999874 35899999999999999999999999999999998743221
Q ss_pred CCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCc-cccccccchhhhhhc
Q 017731 168 CPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGM-QSNYGFDGQIHACWM 246 (367)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (367)
.......................... . . ................+.+..... ...............
T Consensus 147 -----~~~~~~~~~~~~~~~~~~~p~~~~~~--~-~----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~ 214 (298)
T COG2267 147 -----AILRLILARLALKLLGRIRPKLPVDS--N-L----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALL 214 (298)
T ss_pred -----hHHHHHHHHHhcccccccccccccCc--c-c----ccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHH
Confidence 00000000000000000000000000 0 0 000000000001111111111110 000000011111110
Q ss_pred cccChHHHHHhHhcCccEEEEeecCCccCc-HHHHHHHHHHh-cCCcEEEEcCC-CCccccc-Ch--HHHHHHHHHHHhh
Q 017731 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ-ICYARRLAEKL-YPVARMIDLPG-GHLVSHE-RT--EEVNQALIDLIKA 320 (367)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p-~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~e-~p--~~~~~~i~~fl~~ 320 (367)
... .........+++|+|+++|++|.+++ .+...++.+.. .++.++++++| .|.++.| .. +++.+.+.+|+.+
T Consensus 215 a~~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 215 AGR-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred hhc-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 000 11223345678999999999999999 67777777766 35678999998 9998887 45 7899999999988
Q ss_pred hc
Q 017731 321 SE 322 (367)
Q Consensus 321 ~~ 322 (367)
..
T Consensus 294 ~~ 295 (298)
T COG2267 294 AL 295 (298)
T ss_pred hc
Confidence 64
No 41
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=2.1e-25 Score=237.81 Aligned_cols=260 Identities=16% Similarity=0.245 Sum_probs=165.5
Q ss_pred EEEEEecC--CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC
Q 017731 27 IFYRTYGR--GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (367)
Q Consensus 27 l~~~~~g~--~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (367)
++|...|+ ++|+|||+||++++...|.+++..|.+ +|+|+++|+||||.|.....
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~-----------------------~~rVi~~Dl~G~G~S~~~~~ 1416 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISG-----------------------SARCISIDLPGHGGSKIQNH 1416 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhC-----------------------CCEEEEEcCCCCCCCCCccc
Confidence 44555564 346899999999999999999999987 89999999999999975431
Q ss_pred ------CCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHH
Q 017731 105 ------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (367)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (367)
...++++++++++.+++++++.++++|+||||||.+++.++.++|++|+++|++++.... .......
T Consensus 1417 ~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~-------~~~~~~~ 1489 (1655)
T PLN02980 1417 AKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL-------KDEVARK 1489 (1655)
T ss_pred cccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc-------CchHHHH
Confidence 235789999999999999999999999999999999999999999999999999875311 1100000
Q ss_pred HHHHhhccChhhhhhcccCccccHHHHHHHhCCCch----hhHhHHHHHH-hhhhcCccccccccchhhhhhccccChHH
Q 017731 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR----RAILYQEYVK-GISATGMQSNYGFDGQIHACWMHKMTQKD 253 (367)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (367)
..... ......... ......+...++..... .......... ...... ...+...+.. +......+.
T Consensus 1490 ~~~~~---~~~~~~~l~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~-~~~~~~~dl 1560 (1655)
T PLN02980 1490 IRSAK---DDSRARMLI--DHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKD---VPSLAKLLSD-LSIGRQPSL 1560 (1655)
T ss_pred HHhhh---hhHHHHHHH--hhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCC---HHHHHHHHHH-hhhcccchH
Confidence 00000 000000000 00000111111110000 0000001000 000000 0000000000 000111233
Q ss_pred HHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcC-----------CcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYP-----------VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 254 ~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-----------~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
.+.+.++++|+|+|+|++|.+++ +.++++.+.+.. .++++++++ ||++++|+|+++++.|.+||++.
T Consensus 1561 ~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1561 WEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred HHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 46788999999999999999875 666777776522 158999998 99999999999999999999997
Q ss_pred ccCCC
Q 017731 322 EKKIS 326 (367)
Q Consensus 322 ~~~~~ 326 (367)
...+.
T Consensus 1640 ~~~~~ 1644 (1655)
T PLN02980 1640 HNSST 1644 (1655)
T ss_pred cccCC
Confidence 75543
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.94 E-value=4.6e-26 Score=224.44 Aligned_cols=274 Identities=16% Similarity=0.196 Sum_probs=164.0
Q ss_pred ccccccCCcEEEEEEecC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC
Q 017731 17 DAALNDNGIKIFYRTYGR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG 95 (367)
Q Consensus 17 ~~~~~~~g~~l~~~~~g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G 95 (367)
..++..+|.+++|...|+ +.|+|||+||++++...|.++++.|.+ +|+|+++|+||
T Consensus 5 ~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~~-----------------------~~~Vi~~D~~G 61 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLAD-----------------------RFRVVAYDVRG 61 (582)
T ss_pred EEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhhc-----------------------ceEEEEecCCC
Confidence 345678999999999985 456899999999999999999999965 99999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCce-EEEEEeChhHHHHHHHHHh--CCcceeEEEEeccCCCCCCCCCccc
Q 017731 96 MGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQ-AHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCPKLD 172 (367)
Q Consensus 96 ~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~-v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (367)
||.|+.+.....++++++++|+.+++++++..+ ++|+||||||.+++.++.+ .++++..++.++++.... .....
T Consensus 62 ~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~--~~~~~ 139 (582)
T PRK05855 62 AGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH--VGFWL 139 (582)
T ss_pred CCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHH--HHHHH
Confidence 999987654457899999999999999998765 9999999999999988776 244555555544321000 00000
Q ss_pred hh-----hHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCcc---cc---ccccchh
Q 017731 173 LQ-----TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ---SN---YGFDGQI 241 (367)
Q Consensus 173 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~ 241 (367)
.. .................................. ...... ...+........ .. .......
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (582)
T PRK05855 140 RSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLG-----LGRAWP-RLLRRVEGTPVDPIPTQTTLSDGAHGV 213 (582)
T ss_pred hhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccc-----hhhHHH-HhhhhccCCCcchhhhhhhhccccchH
Confidence 00 0000000000000000000000000000000000 000000 000000000000 00 0000000
Q ss_pred hhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhhh
Q 017731 242 HACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
...............+..+++|+++|+|++|.++|++..+.+.+.+ ++.+++++++||+++.|+|+++.+.|.+|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (582)
T PRK05855 214 KLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWV-PRLWRREIKAGHWLPMSHPQVLAAAVAEFVDAV 292 (582)
T ss_pred HHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccC-CcceEEEccCCCcchhhChhHHHHHHHHHHHhc
Confidence 0000000000000123447899999999999999999998888765 778888888899999999999999999999886
Q ss_pred c
Q 017731 322 E 322 (367)
Q Consensus 322 ~ 322 (367)
.
T Consensus 293 ~ 293 (582)
T PRK05855 293 E 293 (582)
T ss_pred c
Confidence 5
No 43
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.93 E-value=5.4e-26 Score=180.95 Aligned_cols=252 Identities=21% Similarity=0.246 Sum_probs=177.5
Q ss_pred CccccccCCcEEEEEEecCCCCeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 16 PDAALNDNGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~~~p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
-++-+.++|.+|+|..+|.|+..|++++|..++. ..|.+++..|.+.+ .++|+++|.|
T Consensus 22 te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l---------------------~~TivawDPp 80 (277)
T KOG2984|consen 22 TESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPL---------------------QVTIVAWDPP 80 (277)
T ss_pred hhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCC---------------------ceEEEEECCC
Confidence 3456778999999999999998899999986654 68999999888732 4999999999
Q ss_pred CCCCCCCCCCCCCCC-HHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccch
Q 017731 95 GMGRSSVPVKKTEYT-TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDL 173 (367)
Q Consensus 95 G~G~S~~~~~~~~~~-~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~ 173 (367)
|+|.|..+....... +..-+++...+++.+..+++.++|||-||..++..|+++++.|.++|+.++..- .....
T Consensus 81 GYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay-----vn~~~ 155 (277)
T KOG2984|consen 81 GYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY-----VNHLG 155 (277)
T ss_pred CCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccce-----ecchh
Confidence 999999887533222 345567777889999999999999999999999999999999999999987621 11111
Q ss_pred hhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHH
Q 017731 174 QTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (367)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (367)
.+.....+-... ...+........+..+.+... ..++++...+......- .--
T Consensus 156 ~ma~kgiRdv~k--Ws~r~R~P~e~~Yg~e~f~~~----------wa~wvD~v~qf~~~~dG---------------~fC 208 (277)
T KOG2984|consen 156 AMAFKGIRDVNK--WSARGRQPYEDHYGPETFRTQ----------WAAWVDVVDQFHSFCDG---------------RFC 208 (277)
T ss_pred HHHHhchHHHhh--hhhhhcchHHHhcCHHHHHHH----------HHHHHHHHHHHhhcCCC---------------chH
Confidence 111111111100 011111112223333333332 22222222211100000 011
Q ss_pred HHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 254 ~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
.-.+.+++||+|++||++|++++...+..+.... +.++++++|. +|.+++..+++|+..+.+||++.
T Consensus 209 r~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~-~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 209 RLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK-SLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred hhhcccccCCeeEeeCCcCCCCCCCCccchhhhc-ccceEEEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 2356789999999999999999999888888875 8999999985 99999999999999999999875
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=2.8e-24 Score=183.19 Aligned_cols=260 Identities=18% Similarity=0.176 Sum_probs=176.5
Q ss_pred CccccccCCcEEEEEEecC---CCC--eEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 16 PDAALNDNGIKIFYRTYGR---GPT--KVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~---~~p--~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
...+.+.+|.++.+..+-+ .+| .|+++||++... ..|..++..|+. .||.|+
T Consensus 29 ~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~----------------------~g~~v~ 86 (313)
T KOG1455|consen 29 ESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK----------------------SGFAVY 86 (313)
T ss_pred eeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh----------------------CCCeEE
Confidence 3456677899999888753 233 699999999876 788899999999 799999
Q ss_pred eeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
++|++|||.|+.... .--+++..++|+....+.. ...+.+++||||||.+++.++.++|+..+|+|+++|.+.
T Consensus 87 a~D~~GhG~SdGl~~-yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~ 165 (313)
T KOG1455|consen 87 AIDYEGHGRSDGLHA-YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCK 165 (313)
T ss_pred EeeccCCCcCCCCcc-cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccc
Confidence 999999999996553 3447899999999888854 224799999999999999999999999999999999865
Q ss_pred CCCCCCccchhhHHHHHHHhhccChhhhhhc---ccCccccHHHHHHHhCCCchh---hHhHHHHHHhhhhcCccccccc
Q 017731 164 GFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV---DLDTHYSQEYLEEYVGSSTRR---AILYQEYVKGISATGMQSNYGF 237 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
..+.... ..........+....+...... .....+...........+... ....+...+.
T Consensus 166 i~~~~kp--~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~El------------ 231 (313)
T KOG1455|consen 166 ISEDTKP--HPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYEL------------ 231 (313)
T ss_pred cCCccCC--CcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHH------------
Confidence 4332211 1111122222222222222100 011111111111111111100 0011111111
Q ss_pred cchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHh-cCCcEEEEcCC-CCcccc----cChHHHH
Q 017731 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSH----ERTEEVN 311 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~----e~p~~~~ 311 (367)
.....+....+.++++|.+++||++|.++.++.++.+.+.. ..+.++..||| =|.+.. |+.+.|.
T Consensus 232 ---------Lr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf 302 (313)
T KOG1455|consen 232 ---------LRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVF 302 (313)
T ss_pred ---------HHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHH
Confidence 11223455778899999999999999999999999999986 35789999999 897774 3557788
Q ss_pred HHHHHHHhhh
Q 017731 312 QALIDLIKAS 321 (367)
Q Consensus 312 ~~i~~fl~~~ 321 (367)
..|.+||++.
T Consensus 303 ~DI~~Wl~~r 312 (313)
T KOG1455|consen 303 GDIISWLDER 312 (313)
T ss_pred HHHHHHHHhc
Confidence 9999999864
No 45
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.93 E-value=3.9e-24 Score=173.52 Aligned_cols=218 Identities=20% Similarity=0.234 Sum_probs=154.9
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
..|||+||+.++....+.+.+.|.+ +||.|.++.+||||.....- ...++++|.++
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e----------------------~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~ 71 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNE----------------------NGYTVYAPRYPGHGTLPEDF--LKTTPRDWWED 71 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHH----------------------CCceEecCCCCCCCCCHHHH--hcCCHHHHHHH
Confidence 5799999999999999999999999 79999999999999886433 35678888887
Q ss_pred HHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhh
Q 017731 117 VIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (367)
Q Consensus 117 l~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (367)
+.+..+.+ +.+.|.++|.||||.+++.+|..+| ++++|.++++... ......+.....++....
T Consensus 72 v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~-----k~~~~iie~~l~y~~~~k------ 138 (243)
T COG1647 72 VEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNV-----KSWRIIIEGLLEYFRNAK------ 138 (243)
T ss_pred HHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCccc-----ccchhhhHHHHHHHHHhh------
Confidence 77666554 6789999999999999999999998 8999999986321 111112222222221100
Q ss_pred cccCccccHHHHHH----HhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEee
Q 017731 194 VDLDTHYSQEYLEE----YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (367)
Q Consensus 194 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 269 (367)
.......+.+.+ +...........+. +.......+..|..|++++.|
T Consensus 139 --k~e~k~~e~~~~e~~~~~~~~~~~~~~~~~---------------------------~i~~~~~~~~~I~~pt~vvq~ 189 (243)
T COG1647 139 --KYEGKDQEQIDKEMKSYKDTPMTTTAQLKK---------------------------LIKDARRSLDKIYSPTLVVQG 189 (243)
T ss_pred --hccCCCHHHHHHHHHHhhcchHHHHHHHHH---------------------------HHHHHHhhhhhcccchhheec
Confidence 000011111111 11101111111111 112334667888999999999
Q ss_pred cCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCccccc-ChHHHHHHHHHHHhh
Q 017731 270 RHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIKA 320 (367)
Q Consensus 270 ~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e-~p~~~~~~i~~fl~~ 320 (367)
++|+++|.+.+..+.+... ...++.++++ ||....+ ..+.+.+.+..||+.
T Consensus 190 ~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 190 RQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred ccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999999999999999874 4678999998 9988876 678999999999974
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.92 E-value=2.8e-23 Score=189.36 Aligned_cols=257 Identities=17% Similarity=0.125 Sum_probs=156.1
Q ss_pred cccCCcEEEEEEecC--CCCeEEEEcCCCCCcc-ch-------------------------HHhHHhhcCCCCCCCCchh
Q 017731 20 LNDNGIKIFYRTYGR--GPTKVILITGLAGTHD-AW-------------------------GPQLKGLAGTDKPNDDDET 71 (367)
Q Consensus 20 ~~~~g~~l~~~~~g~--~~p~vv~lHG~~~~~~-~~-------------------------~~~~~~L~~~~~~~~~~~~ 71 (367)
.+.+|.+|++..+.. .+.+|+++||++.+.. .| ..+++.|.+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~---------- 72 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK---------- 72 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH----------
Confidence 456889999888754 3348999999999885 11 356788877
Q ss_pred hhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhC------------------------
Q 017731 72 ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLG------------------------ 125 (367)
Q Consensus 72 ~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~~~------------------------ 125 (367)
+||.|+++|+||||.|...... ...+++++++|+.++++...
T Consensus 73 ------------~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (332)
T TIGR01607 73 ------------NGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKEN 140 (332)
T ss_pred ------------CCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccC
Confidence 7999999999999999864321 12479999999999987642
Q ss_pred CceEEEEEeChhHHHHHHHHHhCCc--------ceeEEEEeccCCCCCC-CCCc--cchhhHHHHHHHhhccChhhhhhc
Q 017731 126 WKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVTGGGFQ-CCPK--LDLQTLSIAIRFFRAKTPEKRAAV 194 (367)
Q Consensus 126 ~~~v~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 194 (367)
..|++|+||||||.+++.++.++++ .++++|+++|...... ..+. ............+....+......
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~ 220 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK 220 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC
Confidence 2479999999999999999876542 5899998887632110 0000 000001111111111111110000
Q ss_pred ccCcccc--HHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhc--CccEEEEeec
Q 017731 195 DLDTHYS--QEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGR 270 (367)
Q Consensus 195 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~ 270 (367)
...+. +.....+...... ............... ........+..+ ++|+|+++|+
T Consensus 221 --~~~~~~~~~~~~~~~~Dp~~-----------------~~~~~s~~~~~~l~~--~~~~~~~~~~~i~~~~P~Lii~G~ 279 (332)
T TIGR01607 221 --KIRYEKSPYVNDIIKFDKFR-----------------YDGGITFNLASELIK--ATDTLDCDIDYIPKDIPILFIHSK 279 (332)
T ss_pred --ccccccChhhhhHHhcCccc-----------------cCCcccHHHHHHHHH--HHHHHHhhHhhCCCCCCEEEEEeC
Confidence 00000 0000100000000 000000000000000 001111234444 6899999999
Q ss_pred CCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccC-hHHHHHHHHHHHh
Q 017731 271 HDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHER-TEEVNQALIDLIK 319 (367)
Q Consensus 271 ~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~-p~~~~~~i~~fl~ 319 (367)
+|.+++++.++.+.+.+. ++++++++++ +|.++.|. ++++.+.|.+||+
T Consensus 280 ~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 280 GDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 999999999999887653 5789999998 99999884 7899999999985
No 47
>PLN02511 hydrolase
Probab=99.91 E-value=7.6e-24 Score=196.92 Aligned_cols=264 Identities=18% Similarity=0.235 Sum_probs=152.9
Q ss_pred ccccCCcEEEEEEe-------cCCCCeEEEEcCCCCCccc-h-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 19 ALNDNGIKIFYRTY-------GRGPTKVILITGLAGTHDA-W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 19 ~~~~~g~~l~~~~~-------g~~~p~vv~lHG~~~~~~~-~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
....||..+.+.-. ..++|+||++||+++++.. | ..++..+.+ +||+|+
T Consensus 76 l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~----------------------~g~~vv 133 (388)
T PLN02511 76 LRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS----------------------KGWRVV 133 (388)
T ss_pred EECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH----------------------CCCEEE
Confidence 44557777765322 1356789999999877643 4 456665555 599999
Q ss_pred eeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----ceEEEEEeChhHHHHHHHHHhCCcc--eeEEEEeccCCC
Q 017731 90 AFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGG 163 (367)
Q Consensus 90 ~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~----~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~ 163 (367)
++|+||||.|..... .+....+++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++..
T Consensus 134 ~~d~rG~G~s~~~~~--~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 134 VFNSRGCADSPVTTP--QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EEecCCCCCCCCCCc--CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 999999999975432 22234567788777777654 5899999999999999999999987 888888876521
Q ss_pred CCCCCCccchhhHHHHH-HHhhccChhhhh----h-cccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccc
Q 017731 164 GFQCCPKLDLQTLSIAI-RFFRAKTPEKRA----A-VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGF 237 (367)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (367)
.......... ...... ..+......... . ......+..... . ......++.+.+... ..++
T Consensus 212 l~~~~~~~~~-~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~fd~~~t~~----~~gf 278 (388)
T PLN02511 212 LVIADEDFHK-GFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLV---A-----NAKTVRDFDDGLTRV----SFGF 278 (388)
T ss_pred HHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHH---H-----hCCCHHHHHHhhhhh----cCCC
Confidence 1000000000 000000 000000000000 0 000000000000 0 000111111111110 0111
Q ss_pred cchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHH-HHHHHHhcCCcEEEEcCC-CCcccccChHH------
Q 017731 238 DGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-RRLAEKLYPVARMIDLPG-GHLVSHERTEE------ 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~-~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~------ 309 (367)
.. ...++.. ......++++++|+|+|+|++|+++|.+.. ....+. .++++++++++ ||..++|+|+.
T Consensus 279 ~~-~~~yy~~---~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~-~p~~~l~~~~~gGH~~~~E~p~~~~~~~w 353 (388)
T PLN02511 279 KS-VDAYYSN---SSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA-NPNCLLIVTPSGGHLGWVAGPEAPFGAPW 353 (388)
T ss_pred CC-HHHHHHH---cCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc-CCCEEEEECCCcceeccccCCCCCCCCcc
Confidence 11 1111110 112356788999999999999999998755 345554 48999999997 99999999876
Q ss_pred HHHHHHHHHhhhccC
Q 017731 310 VNQALIDLIKASEKK 324 (367)
Q Consensus 310 ~~~~i~~fl~~~~~~ 324 (367)
+.+.+.+||+.....
T Consensus 354 ~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 354 TDPVVMEFLEALEEG 368 (388)
T ss_pred HHHHHHHHHHHHHHh
Confidence 489999999887543
No 48
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.91 E-value=9.2e-23 Score=176.84 Aligned_cols=252 Identities=19% Similarity=0.225 Sum_probs=163.7
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..|+++++||+.++...|+.+...|+.. -+..|+++|.|.||.|.... .++...++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~---------------------l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma 106 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRK---------------------LGRDVYAVDVRNHGSSPKIT---VHNYEAMA 106 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhccc---------------------ccCceEEEecccCCCCcccc---ccCHHHHH
Confidence 4578999999999999999999999984 36799999999999998765 56799999
Q ss_pred HHHHHHHHHhC----CceEEEEEeChhH-HHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChh
Q 017731 115 KDVIALMDHLG----WKQAHVFGHSMGA-MIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (367)
Q Consensus 115 ~dl~~~l~~~~----~~~v~lvGhS~Gg-~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (367)
+|+..+++..+ ..+++++|||||| .+++..+...|+.+.++|+++.++... +........ .+..+......
T Consensus 107 ~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~---~~~~~e~~e-~i~~m~~~d~~ 182 (315)
T KOG2382|consen 107 EDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGV---GRSYGEYRE-LIKAMIQLDLS 182 (315)
T ss_pred HHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccC---CcccchHHH-HHHHHHhcccc
Confidence 99999999885 4689999999999 788888889999999999999875321 111111111 11111111111
Q ss_pred hhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhh--cCcccccccc-chhhhhhcc---ccChHHHHHhHhcCcc
Q 017731 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISA--TGMQSNYGFD-GQIHACWMH---KMTQKDIQTIRSAGFL 263 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~l~~i~~P 263 (367)
... ......+.+.+..........+.....+.+ ......+.+. ..+...+.. .......+. ...+.|
T Consensus 183 ~~~------~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~-~~~~~p 255 (315)
T KOG2382|consen 183 IGV------SRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED-GPYTGP 255 (315)
T ss_pred ccc------cccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc-cccccc
Confidence 000 011111111111111111111222222221 0000011110 111111111 001111122 456789
Q ss_pred EEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcC-CCCcccccChHHHHHHHHHHHhhhc
Q 017731 264 VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 264 vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~-ggH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
|+++.|.++..++.+.-.++.+.+ +++++++++ +||+++.|+|+++.+.|.+|+++++
T Consensus 256 vlfi~g~~S~fv~~~~~~~~~~~f-p~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 256 VLFIKGLQSKFVPDEHYPRMEKIF-PNVEVHELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred eeEEecCCCCCcChhHHHHHHHhc-cchheeecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 999999999999999888888876 999999999 4999999999999999999998764
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=5.7e-21 Score=178.51 Aligned_cols=227 Identities=18% Similarity=0.180 Sum_probs=143.8
Q ss_pred CCcEEEEEEe---c-CCCCeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC
Q 017731 23 NGIKIFYRTY---G-RGPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (367)
Q Consensus 23 ~g~~l~~~~~---g-~~~p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (367)
+|..+..... + +..|+||++||+++.. +.|..+.+.|.+ +||.|+++|+||+|
T Consensus 177 ~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~----------------------~Gy~vl~~D~pG~G 234 (414)
T PRK05077 177 GGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAP----------------------RGIAMLTIDMPSVG 234 (414)
T ss_pred CCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHh----------------------CCCEEEEECCCCCC
Confidence 5546654432 2 2345666666766654 568888888988 69999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchh
Q 017731 98 RSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQ 174 (367)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (367)
.|.... ...+......++.+.+... +.+++.++||||||.+++.+|..+|++|+++|++++......... .
T Consensus 235 ~s~~~~--~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~----~ 308 (414)
T PRK05077 235 FSSKWK--LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDP----K 308 (414)
T ss_pred CCCCCC--ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcch----h
Confidence 996532 1223444455566666554 557899999999999999999999999999999987632110000 0
Q ss_pred hHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHH
Q 017731 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDI 254 (367)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (367)
... . .+.. + ...+...+................+ .....
T Consensus 309 ~~~-------~-~p~~---------~-~~~la~~lg~~~~~~~~l~~~l~~~-----------------------sl~~~ 347 (414)
T PRK05077 309 RQQ-------Q-VPEM---------Y-LDVLASRLGMHDASDEALRVELNRY-----------------------SLKVQ 347 (414)
T ss_pred hhh-------h-chHH---------H-HHHHHHHhCCCCCChHHHHHHhhhc-----------------------cchhh
Confidence 000 0 0000 0 0000010110000000000000000 00000
Q ss_pred HHh-HhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhhh
Q 017731 255 QTI-RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 255 ~~l-~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
..+ +++++|+|+|+|++|.++|++.++.+.+.. ++.+++++++. ++.+.++++.+.|.+||++.
T Consensus 348 ~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~-~~~~l~~i~~~--~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 348 GLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS-ADGKLLEIPFK--PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC-CCCeEEEccCC--CccCCHHHHHHHHHHHHHHH
Confidence 111 468899999999999999999999888765 89999999985 45579999999999999875
No 50
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=4.5e-22 Score=172.12 Aligned_cols=217 Identities=24% Similarity=0.293 Sum_probs=132.2
Q ss_pred eEEEeeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 86 IEVCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 86 ~~vi~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
|+|+++|+||+|.|+. ......++.+++++++..++++++.++++++||||||.+++.+|+++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 7899999999999994 13346889999999999999999999999999999999999999999999999999998520
Q ss_pred CCCCCCcc-chhhHHHHHHHhhccChhhhhh--cccCccccHHH------HHHHhCCCchhhHhHHHHHHhhhhcCcccc
Q 017731 164 GFQCCPKL-DLQTLSIAIRFFRAKTPEKRAA--VDLDTHYSQEY------LEEYVGSSTRRAILYQEYVKGISATGMQSN 234 (367)
Q Consensus 164 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (367)
.+.. ....... ............. ........... .................+... . ..
T Consensus 81 ----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~ 148 (230)
T PF00561_consen 81 ----LPDGLWNRIWPR--GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARF----A--ET 148 (230)
T ss_dssp ----HHHHHHHHCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT----C--HH
T ss_pred ----chhhhhHHHHhh--hhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHH----H--HH
Confidence 0000 0000000 0000000000000 00000000000 000000000000000000000 0 00
Q ss_pred ccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHH
Q 017731 235 YGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQA 313 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~ 313 (367)
.................+....+..+++|+++++|++|.++|++....+.+.+ ++.+++++++ ||+.+++.++++++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~GH~~~~~~~~~~~~~ 227 (230)
T PF00561_consen 149 DAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI-PNSQLVLIEGSGHFAFLEGPDEFNEI 227 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS-TTEEEEEETTCCSTHHHHSHHHHHHH
T ss_pred HHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc-CCCEEEECCCCChHHHhcCHHhhhhh
Confidence 00000000000111122334667789999999999999999999999988875 8899999998 999999999999998
Q ss_pred HH
Q 017731 314 LI 315 (367)
Q Consensus 314 i~ 315 (367)
|.
T Consensus 228 i~ 229 (230)
T PF00561_consen 228 II 229 (230)
T ss_dssp HH
T ss_pred hc
Confidence 85
No 51
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.88 E-value=1.2e-20 Score=167.84 Aligned_cols=246 Identities=17% Similarity=0.157 Sum_probs=144.3
Q ss_pred ccCCcEEEEE-Eec--CCCCeEEEEcCCCC----CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC
Q 017731 21 NDNGIKIFYR-TYG--RGPTKVILITGLAG----THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (367)
Q Consensus 21 ~~~g~~l~~~-~~g--~~~p~vv~lHG~~~----~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (367)
..+|.++.-. ... ..++.||++||.+. +...|..+++.|++ +||+|+++|+
T Consensus 8 ~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~----------------------~G~~v~~~Dl 65 (274)
T TIGR03100 8 SCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAE----------------------AGFPVLRFDY 65 (274)
T ss_pred EcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHH----------------------CCCEEEEeCC
Confidence 4455555422 221 23456888887653 23346677888887 6999999999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCC
Q 017731 94 RGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (367)
Q Consensus 94 ~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (367)
||||.|.... .+++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|++++......
T Consensus 66 ~G~G~S~~~~----~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~-- 138 (274)
T TIGR03100 66 RGMGDSEGEN----LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEA-- 138 (274)
T ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcc--
Confidence 9999987432 36777888888888776 55789999999999999999865 468999999997532111
Q ss_pred CccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhc-Cccccccccchhhhhhcc
Q 017731 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT-GMQSNYGFDGQIHACWMH 247 (367)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (367)
.......... +.... ....+...............+.+...+... .........
T Consensus 139 -~~~~~~~~~~--~~~~~-------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 193 (274)
T TIGR03100 139 -AQAASRIRHY--YLGQL-------------LSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHG--------- 193 (274)
T ss_pred -cchHHHHHHH--HHHHH-------------hChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccc---------
Confidence 0000000000 00000 000111111111111111111111111000 000000000
Q ss_pred ccChHHHHHhHhcCccEEEEeecCCccCcHHHH-----HHHHHHhc-CCcEEEEcCC-CCccccc-ChHHHHHHHHHHHh
Q 017731 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYA-----RRLAEKLY-PVARMIDLPG-GHLVSHE-RTEEVNQALIDLIK 319 (367)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~-----~~~~~~~~-~~~~~~~~~g-gH~~~~e-~p~~~~~~i~~fl~ 319 (367)
....+....+..+++|+++++|+.|...+.... ..+.+.+. ++++++.+++ +|++..+ .++++.+.|.+||+
T Consensus 194 ~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 194 GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 012334466777899999999999998642211 44455442 7899999997 9998666 55999999999996
Q ss_pred h
Q 017731 320 A 320 (367)
Q Consensus 320 ~ 320 (367)
+
T Consensus 274 ~ 274 (274)
T TIGR03100 274 R 274 (274)
T ss_pred C
Confidence 3
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.87 E-value=1.2e-20 Score=171.94 Aligned_cols=262 Identities=15% Similarity=0.093 Sum_probs=145.7
Q ss_pred cccccCCcEEEEEEe--c---CCCCeEEEEcCCCCCccc--hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEe
Q 017731 18 AALNDNGIKIFYRTY--G---RGPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~--g---~~~p~vv~lHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (367)
.+...||..+.+... + ..+|+||++||++++... +..++..|.+ +||+|++
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~----------------------~G~~v~~ 92 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQK----------------------RGWLGVV 92 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHH----------------------CCCEEEE
Confidence 345557766554322 1 235789999999887543 4568888887 7999999
Q ss_pred eCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcc--eeEEEEeccCCCCCC
Q 017731 91 FDNRGMGRSSVPVKKT--EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLNVTGGGFQ 166 (367)
Q Consensus 91 ~D~~G~G~S~~~~~~~--~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~~~~~~~~ 166 (367)
+|+||||.+....... ....+|....+..+.+.++..+++++||||||.+++.++.++++. +.++|+++++.....
T Consensus 93 ~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~ 172 (324)
T PRK10985 93 MHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEA 172 (324)
T ss_pred EeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHH
Confidence 9999999775432111 112344333333344456777899999999999999888877644 889999987531100
Q ss_pred CCCccchhhHHHH-HHHhhccChhhhhhcccCccccHHHHHHHhCCCchhh------HhHHHHHHhhhhcCccccccccc
Q 017731 167 CCPKLDLQTLSIA-IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRA------ILYQEYVKGISATGMQSNYGFDG 239 (367)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
....... ..... .+.+....... .......+........ ....++.+.+. ....++..
T Consensus 173 ~~~~~~~-~~~~~~~~~l~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~----~~~~g~~~ 237 (324)
T PRK10985 173 CSYRMEQ-GFSRVYQRYLLNLLKAN----------AARKLAAYPGTLPINLAQLKSVRRLREFDDLIT----ARIHGFAD 237 (324)
T ss_pred HHHHHhh-hHHHHHHHHHHHHHHHH----------HHHHHHhccccccCCHHHHhcCCcHHHHhhhhe----eccCCCCC
Confidence 0000000 00000 00000000000 0000111110000000 00111111111 11112222
Q ss_pred hhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccCh-----HHHHHH
Q 017731 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT-----EEVNQA 313 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p-----~~~~~~ 313 (367)
....+.. ....+.++++++|+++|+|++|++++++....+.+. .++.+++++++ ||+.+++.. --.-+.
T Consensus 238 ~~~~y~~----~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~-~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~ 312 (324)
T PRK10985 238 AIDYYRQ----CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESL-PPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQR 312 (324)
T ss_pred HHHHHHH----CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHh-CCCeEEEECCCCCceeeCCCCCCCCCccHHHH
Confidence 2111111 123466788999999999999999998888777654 47889999987 999998742 234566
Q ss_pred HHHHHhhh
Q 017731 314 LIDLIKAS 321 (367)
Q Consensus 314 i~~fl~~~ 321 (367)
+.+|+...
T Consensus 313 ~~~~~~~~ 320 (324)
T PRK10985 313 IPDWLTTY 320 (324)
T ss_pred HHHHHHHh
Confidence 77777654
No 53
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=3e-20 Score=163.45 Aligned_cols=278 Identities=22% Similarity=0.207 Sum_probs=183.8
Q ss_pred ccCCcEEEEEEecC----CCCeEEEEcCCCCCccchHH-------hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 21 NDNGIKIFYRTYGR----GPTKVILITGLAGTHDAWGP-------QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 21 ~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~~~~-------~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
.+++..|.|+++|. ....||++|++.+++..... +++.+....+++|+ ..|.||
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt---------------~r~fvI 96 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDT---------------ERFFVI 96 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCc---------------cceEEE
Confidence 45678899999994 24579999999998876653 88999999999999 899999
Q ss_pred eeCCCCCC-CCCCCCC-----------CCCCCHHHHHHHHHHHHHHhCCceEE-EEEeChhHHHHHHHHHhCCcceeEEE
Q 017731 90 AFDNRGMG-RSSVPVK-----------KTEYTTKIMAKDVIALMDHLGWKQAH-VFGHSMGAMIACKLAAMVPERVLSLA 156 (367)
Q Consensus 90 ~~D~~G~G-~S~~~~~-----------~~~~~~~~~~~dl~~~l~~~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~v~~lv 156 (367)
+.|..|.+ .|+.|.. ...+++.|+++.-..+++++|++++. +||.||||+.+++++..||++|+++|
T Consensus 97 c~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i 176 (368)
T COG2021 97 CTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAI 176 (368)
T ss_pred EecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhh
Confidence 99999876 4444321 13468889999889999999999987 88999999999999999999999999
Q ss_pred EeccCCCCCCCCCccchh--hHHHHHHHhhccChhhhhh-----------------cccCccccHHHHHHHhCCCc----
Q 017731 157 LLNVTGGGFQCCPKLDLQ--TLSIAIRFFRAKTPEKRAA-----------------VDLDTHYSQEYLEEYVGSST---- 213 (367)
Q Consensus 157 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~---- 213 (367)
.++++. ..... .+....+..-...+..... ...-...+.+.+.+.+....
T Consensus 177 ~ia~~~-------r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~ 249 (368)
T COG2021 177 PIATAA-------RLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADP 249 (368)
T ss_pred eecccc-------cCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccc
Confidence 999863 21111 1111111111111111000 00111223334443333311
Q ss_pred ----hhhHhHHHHHHhhhhc--Cccccccccchhhhhhcccc---ChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHH
Q 017731 214 ----RRAILYQEYVKGISAT--GMQSNYGFDGQIHACWMHKM---TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLA 284 (367)
Q Consensus 214 ----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~ 284 (367)
......+.|++..-.. .......+.....+.-.++. ..+....++++++|++++.-+.|...|++..+.+.
T Consensus 250 ~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~ 329 (368)
T COG2021 250 LRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALA 329 (368)
T ss_pred cCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHH
Confidence 0012223333222110 01111111122222222221 13445678999999999999999999999999999
Q ss_pred HHhcCCcEEEEcCC--CCcccccChHHHHHHHHHHHhh
Q 017731 285 EKLYPVARMIDLPG--GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 285 ~~~~~~~~~~~~~g--gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+.+.....+++++. ||..++...+.+...|..||+.
T Consensus 330 ~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 330 EALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 99844333888863 9999999999999999999975
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=2.7e-20 Score=163.41 Aligned_cols=233 Identities=18% Similarity=0.228 Sum_probs=141.0
Q ss_pred ccCCcEEEEEEecC------CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 21 NDNGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 21 ~~~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
..+|.+|.-+..-+ +.++||++||++.....|..+++.|.+ +||.|+.+|+|
T Consensus 16 ~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~----------------------~G~~vLrfD~r 73 (307)
T PRK13604 16 LENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS----------------------NGFHVIRYDSL 73 (307)
T ss_pred cCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH----------------------CCCEEEEecCC
Confidence 44788888655432 235899999999988779999999998 79999999999
Q ss_pred CC-CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCc
Q 017731 95 GM-GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 95 G~-G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (367)
|+ |.|+.... ..+.....+|+.++++.+ +.+++.|+||||||.+++..|... .++++|+.+|...
T Consensus 74 g~~GeS~G~~~--~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~------- 142 (307)
T PRK13604 74 HHVGLSSGTID--EFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVN------- 142 (307)
T ss_pred CCCCCCCCccc--cCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCccc-------
Confidence 88 99976442 233333456765555544 557899999999999997777643 3899999887631
Q ss_pred cchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccC
Q 017731 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (367)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+. ..+.. .+...... ....... ..+. +.+... . ...+.+...... +. ..
T Consensus 143 l~-d~l~~---~~~~~~~~-~p~~~lp-----~~~d-~~g~~l-~---~~~f~~~~~~~~--------------~~--~~ 191 (307)
T PRK13604 143 LR-DTLER---ALGYDYLS-LPIDELP-----EDLD-FEGHNL-G---SEVFVTDCFKHG--------------WD--TL 191 (307)
T ss_pred HH-HHHHH---hhhccccc-Ccccccc-----cccc-cccccc-c---HHHHHHHHHhcC--------------cc--cc
Confidence 11 11110 00000000 0000000 0000 000000 0 001111000000 00 00
Q ss_pred hHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
....+.++.+++|+|+|||++|.++|.+.++.+.+.+. .+++++.++| +|.+. |++- .+.+|.++..
T Consensus 192 ~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~~----~~~~~~~~~~ 260 (307)
T PRK13604 192 DSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENLV----VLRNFYQSVT 260 (307)
T ss_pred ccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cchH----HHHHHHHHHH
Confidence 12234566778999999999999999999999999873 4799999999 89775 4432 3344554443
No 55
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.86 E-value=1.9e-20 Score=172.61 Aligned_cols=263 Identities=14% Similarity=0.132 Sum_probs=149.5
Q ss_pred ccccCCcEEEEEEec---CCCCeEEEEcCCCCCccch-----HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEe
Q 017731 19 ALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (367)
+...++.++...... ..+++||++||+..+...+ +.+++.|.+ +||+|++
T Consensus 42 v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~----------------------~G~~V~~ 99 (350)
T TIGR01836 42 VYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE----------------------RGQDVYL 99 (350)
T ss_pred EEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------CCCeEEE
Confidence 334455566554332 1234699999986655443 688999988 7999999
Q ss_pred eCCCCCCCCCCCCCCCCCCHHHHHHH-H----HHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 91 FDNRGMGRSSVPVKKTEYTTKIMAKD-V----IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 91 ~D~~G~G~S~~~~~~~~~~~~~~~~d-l----~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
+|++|+|.+.. ..++++++++ + ..+.+..+.++++++||||||.+++.+++.+|++|+++|+++++....
T Consensus 100 ~D~~g~g~s~~-----~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 100 IDWGYPDRADR-----YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred EeCCCCCHHHh-----cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 99999998753 3356666543 3 344555677899999999999999999999999999999999864321
Q ss_pred CCCCccchh-----hHHHHHHHhhccChhhhhh----cccCccc------------cHHHHHHH------hCCC-chhhH
Q 017731 166 QCCPKLDLQ-----TLSIAIRFFRAKTPEKRAA----VDLDTHY------------SQEYLEEY------VGSS-TRRAI 217 (367)
Q Consensus 166 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~------~~~~-~~~~~ 217 (367)
.. +..... ................... ....... ..+....+ .... .....
T Consensus 175 ~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~ 253 (350)
T TIGR01836 175 TP-GNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGE 253 (350)
T ss_pred CC-CchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHH
Confidence 10 000000 0000000000000000000 0000000 00000000 0000 00001
Q ss_pred hHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEc
Q 017731 218 LYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDL 296 (367)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~ 296 (367)
...++.+.+........ .. +. .......++++++|+++++|++|.++|++.++.+.+.+. .+.+++++
T Consensus 254 ~~~~~~~~~~~~n~l~~----g~----~~---~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~ 322 (350)
T TIGR01836 254 AFRQFVKDFYQQNGLIN----GE----VE---IGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSF 322 (350)
T ss_pred HHHHHHHHHHhcCcccC----Ce----eE---ECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEc
Confidence 11111111100000000 00 00 000112366889999999999999999999999999873 24677888
Q ss_pred CCCCcccccC---hHHHHHHHHHHHhh
Q 017731 297 PGGHLVSHER---TEEVNQALIDLIKA 320 (367)
Q Consensus 297 ~ggH~~~~e~---p~~~~~~i~~fl~~ 320 (367)
++||..++.. ++++.+.|.+||++
T Consensus 323 ~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 323 PGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 8999887764 47899999999975
No 56
>PLN02872 triacylglycerol lipase
Probab=99.86 E-value=1.2e-20 Score=174.15 Aligned_cols=280 Identities=16% Similarity=0.144 Sum_probs=159.7
Q ss_pred cccccCCcEEEEEEec--------CCCCeEEEEcCCCCCccchH------HhHHhhcCCCCCCCCchhhhcccccCCCCC
Q 017731 18 AALNDNGIKIFYRTYG--------RGPTKVILITGLAGTHDAWG------PQLKGLAGTDKPNDDDETILQDSVESGDGG 83 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g--------~~~p~vv~lHG~~~~~~~~~------~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 83 (367)
.+.+.||..|...... .++|+|+++||+++++..|. .+...|++
T Consensus 48 ~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~---------------------- 105 (395)
T PLN02872 48 TIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD---------------------- 105 (395)
T ss_pred EEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh----------------------
Confidence 3556789988877642 12468999999999988873 34445666
Q ss_pred CCeEEEeeCCCCCCCCCC-------CCCCCCCCHHHHH-HHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCc--
Q 017731 84 AGIEVCAFDNRGMGRSSV-------PVKKTEYTTKIMA-KDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPE-- 150 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~-------~~~~~~~~~~~~~-~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~-- 150 (367)
+||+|+++|+||++.|.. ......+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+
T Consensus 106 ~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~ 184 (395)
T PLN02872 106 HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVV 184 (395)
T ss_pred CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHH
Confidence 699999999999886532 1112357888888 7999999986 347899999999999998555 5676
Q ss_pred -ceeEEEEeccCCCCCCCCCccchhhHH----HHHHHhhc--cChhh--hh---hcccC-ccccHHHHHHHhCCC-----
Q 017731 151 -RVLSLALLNVTGGGFQCCPKLDLQTLS----IAIRFFRA--KTPEK--RA---AVDLD-THYSQEYLEEYVGSS----- 212 (367)
Q Consensus 151 -~v~~lvl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~--~~---~~~~~-~~~~~~~~~~~~~~~----- 212 (367)
+|+.+++++|..........+...... .....+.. ..+.. .. ..... .......+....+..
T Consensus 185 ~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~ 264 (395)
T PLN02872 185 EMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNA 264 (395)
T ss_pred HHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccch
Confidence 688889888864221111111100000 00000000 00000 00 00000 000000011111100
Q ss_pred ------------chhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhc--CccEEEEeecCCccCcHH
Q 017731 213 ------------TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSA--GFLVSVIHGRHDVIAQIC 278 (367)
Q Consensus 213 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~Pvlii~G~~D~~~p~~ 278 (367)
.........+...+ ..+....+.+....+.......+.. .-.++++ ++|+++++|++|.+++++
T Consensus 265 ~~~~~~~~~~pagtS~k~~~H~~Q~~-~s~~f~~yDyg~~~n~~~Yg~~~pP-~Y~l~~i~~~~Pv~i~~G~~D~lv~~~ 342 (395)
T PLN02872 265 SRIDYYLEYEPHPSSVKNLRHLFQMI-RKGTFAHYDYGIFKNLKLYGQVNPP-AFDLSLIPKSLPLWMGYGGTDGLADVT 342 (395)
T ss_pred hhhhHHHhcCCCcchHHHHHHHHHHH-hcCCcccCCCCchhhHHHhCCCCCC-CcCcccCCCCccEEEEEcCCCCCCCHH
Confidence 00001111111111 1222222222211111111111111 1124555 589999999999999999
Q ss_pred HHHHHHHHhcCCcEEEEcCC-CCcc---cccChHHHHHHHHHHHhhhc
Q 017731 279 YARRLAEKLYPVARMIDLPG-GHLV---SHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~g-gH~~---~~e~p~~~~~~i~~fl~~~~ 322 (367)
.++.+.+.+....+++.+++ +|.. ..+.++++.+.|.+|+++..
T Consensus 343 dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~ 390 (395)
T PLN02872 343 DVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLG 390 (395)
T ss_pred HHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhh
Confidence 99999998844468888998 9964 44889999999999998654
No 57
>PRK10566 esterase; Provisional
Probab=99.86 E-value=8.6e-20 Score=160.33 Aligned_cols=213 Identities=17% Similarity=0.122 Sum_probs=128.4
Q ss_pred EEEEEecC---CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC
Q 017731 27 IFYRTYGR---GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (367)
Q Consensus 27 l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (367)
++|...+. ..|+||++||++++...|..+...|.+ +||.|+++|+||||.+....
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~d~~g~G~~~~~~ 72 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQ----------------------AGFRVIMPDAPMHGARFSGD 72 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHh----------------------CCCEEEEecCCcccccCCCc
Confidence 44544432 347899999999999899999999988 69999999999999864322
Q ss_pred CCCCCC-----HHHHHHHHHHHHHH------hCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccc
Q 017731 104 KKTEYT-----TKIMAKDVIALMDH------LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (367)
Q Consensus 104 ~~~~~~-----~~~~~~dl~~~l~~------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (367)
.....+ ..+..+|+.++++. ++.++++++|||+||.+++.++.++|+....++++++.. ..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~--------~~ 144 (249)
T PRK10566 73 EARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY--------FT 144 (249)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH--------HH
Confidence 101110 11223344333333 234689999999999999999999886444444444220 00
Q ss_pred hhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChH
Q 017731 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (367)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (367)
....... .... .. ..........+..... ..+
T Consensus 145 -----~~~~~~~--~~~~-~~------------------~~~~~~~~~~~~~~~~----------------------~~~ 176 (249)
T PRK10566 145 -----SLARTLF--PPLI-PE------------------TAAQQAEFNNIVAPLA----------------------EWE 176 (249)
T ss_pred -----HHHHHhc--cccc-cc------------------ccccHHHHHHHHHHHh----------------------hcC
Confidence 0000000 0000 00 0000000000000000 001
Q ss_pred HHHHhHhc-CccEEEEeecCCccCcHHHHHHHHHHhcC-----CcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 253 DIQTIRSA-GFLVSVIHGRHDVIAQICYARRLAEKLYP-----VARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 253 ~~~~l~~i-~~Pvlii~G~~D~~~p~~~~~~~~~~~~~-----~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
....+.++ ++|+|+++|++|.++|++.++.+.+.+.. +.+++.+++ ||... .+..+.+.+||++.
T Consensus 177 ~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~~~~~~~~fl~~~ 248 (249)
T PRK10566 177 VTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PEALDAGVAFFRQH 248 (249)
T ss_pred hhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HHHHHHHHHHHHhh
Confidence 11234454 68999999999999999999999987732 357778898 99864 34678888888753
No 58
>PRK11071 esterase YqiA; Provisional
Probab=99.84 E-value=1.3e-19 Score=151.71 Aligned_cols=185 Identities=12% Similarity=0.108 Sum_probs=123.4
Q ss_pred CeEEEEcCCCCCccchHH--hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 37 TKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
|+||++||++++...|.. +.+.+.+.. .+|+|+++|+||++ ++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~--------------------~~~~v~~~dl~g~~-------------~~~~ 48 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH--------------------PDIEMIVPQLPPYP-------------ADAA 48 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC--------------------CCCeEEeCCCCCCH-------------HHHH
Confidence 579999999999999874 335554310 27999999999984 3578
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhc
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAV 194 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (367)
+++.++++.++.++++++||||||.+++.+|.++|. ++|+++++.. .. .....+.... .... .
T Consensus 49 ~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~--------~~---~~~~~~~~~~-~~~~--~ 111 (190)
T PRK11071 49 ELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR--------PF---ELLTDYLGEN-ENPY--T 111 (190)
T ss_pred HHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC--------HH---HHHHHhcCCc-cccc--C
Confidence 899999999999999999999999999999999983 4688887521 00 1111111100 0000 0
Q ss_pred ccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCcc
Q 017731 195 DLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVI 274 (367)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~ 274 (367)
.........++.. .... ....+. ..+|+++++|++|.+
T Consensus 112 ~~~~~~~~~~~~d------------------~~~~-----------------------~~~~i~-~~~~v~iihg~~De~ 149 (190)
T PRK11071 112 GQQYVLESRHIYD------------------LKVM-----------------------QIDPLE-SPDLIWLLQQTGDEV 149 (190)
T ss_pred CCcEEEcHHHHHH------------------HHhc-----------------------CCccCC-ChhhEEEEEeCCCCc
Confidence 0000011111111 0000 001122 557899999999999
Q ss_pred CcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 275 AQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 275 ~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
+|++.+.++.+. ++.+.++| +|.+ ...+++.+.|.+|++
T Consensus 150 V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 150 LDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999999884 46667788 8877 445889999999875
No 59
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.83 E-value=8.1e-19 Score=153.66 Aligned_cols=266 Identities=26% Similarity=0.377 Sum_probs=153.9
Q ss_pred ccCCcEEEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC
Q 017731 21 NDNGIKIFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (367)
Q Consensus 21 ~~~g~~l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (367)
...+..+.|...+...|+++++||++++...|......+... . ..|+++++|+||||.|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~d~~g~g~s~ 65 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPAL-------------------A-ARYRVIAPDLRGHGRSD 65 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhcc-------------------c-cceEEEEecccCCCCCC
Confidence 345667777777765668999999999999988844444431 0 12999999999999997
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCcc----chhhH
Q 017731 101 VPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKL----DLQTL 176 (367)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~----~~~~~ 176 (367)
.. ..+...+++++..+++.++..+++++|||+||.+++.++.++|++++++|++++........... .....
T Consensus 66 -~~---~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 141 (282)
T COG0596 66 -PA---GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPL 141 (282)
T ss_pred -cc---cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccch
Confidence 11 34555569999999999998889999999999999999999999999999999864311000000 00000
Q ss_pred HHHHHHhhcc-ChhhhhhcccCccccHHHHHH--HhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHH
Q 017731 177 SIAIRFFRAK-TPEKRAAVDLDTHYSQEYLEE--YVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKD 253 (367)
Q Consensus 177 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (367)
.......... ............ ........ ........................ ...... .........
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~ 213 (282)
T COG0596 142 AALADLLLGLDAAAFAALLAALG-LLAALAAAARAGLAEALRAPLLGAAAAAFARAAR---ADLAAA----LLALLDRDL 213 (282)
T ss_pred hhhhhhhhccchhhhhhhhhccc-ccccccccchhccccccccccchhHhhhhhhhcc---cccchh----hhccccccc
Confidence 0000000000 000000000000 00000000 000000000000000000000000 000000 000000012
Q ss_pred HHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCC-cEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 254 ~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~-~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
......+++|+++++|++|.+.|......+.+.+ ++ .+++++++ ||+++.++|+.+.+.+.+|++
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPAELARRLAAAL-PNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCHHHHHHHHhhC-CCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 3455677899999999999777766656666654 54 88999997 999999999999999888554
No 60
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=5.7e-19 Score=167.56 Aligned_cols=238 Identities=16% Similarity=0.102 Sum_probs=140.8
Q ss_pred CCeEEEEcCCCCCccchH-----HhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCH
Q 017731 36 PTKVILITGLAGTHDAWG-----PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~-----~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (367)
+++||++||+......|+ .+++.|.+ +||+|+++|++|+|.+........|..
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------qGf~V~~iDwrgpg~s~~~~~~ddY~~ 245 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------QGHTVFVISWRNPDASQADKTFDDYIR 245 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHH----------------------CCcEEEEEECCCCCcccccCChhhhHH
Confidence 457999999988888775 78999988 799999999999998865443234555
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHH----HHHHhC-CcceeEEEEeccCCCCCCCCCccc----hhhHHHHHH
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIAC----KLAAMV-PERVLSLALLNVTGGGFQCCPKLD----LQTLSIAIR 181 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~----~~a~~~-p~~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~ 181 (367)
+.+.+.+..+++..+.++++++||||||.++. .+++.+ +++|++++++++...... ...+. ...+....+
T Consensus 246 ~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~-~G~l~~f~~~~~~~~~e~ 324 (532)
T TIGR01838 246 DGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD-PGELGVFVDEEIVAGIER 324 (532)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC-cchhhhhcCchhHHHHHH
Confidence 56667788888888999999999999999862 245555 789999999998743211 11110 011101111
Q ss_pred Hhhc---cChhhhhh----cccCccccHHHHHHHhCCCc---------------hhhHhHHHHHHhhhhcCccccccccc
Q 017731 182 FFRA---KTPEKRAA----VDLDTHYSQEYLEEYVGSST---------------RRAILYQEYVKGISATGMQSNYGFDG 239 (367)
Q Consensus 182 ~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
.... ........ ..........++..++.... .......++++.+-.......-.
T Consensus 325 ~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~--- 401 (532)
T TIGR01838 325 QNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGG--- 401 (532)
T ss_pred HHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCe---
Confidence 1100 00000000 00000000111111111110 01122222222221111100000
Q ss_pred hhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChH
Q 017731 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTE 308 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~ 308 (367)
+ ...+....+..+++|+++|+|++|.++|++.++.+.+.+ ++.+..++++ ||..++++|.
T Consensus 402 -~-------~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i-~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 402 -L-------EVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALL-GGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred -e-------EECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHC-CCCEEEEECCCCCchHhhCCC
Confidence 0 001223567889999999999999999999999998886 6778888876 9999887664
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.82 E-value=3.5e-19 Score=142.91 Aligned_cols=144 Identities=31% Similarity=0.410 Sum_probs=114.3
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
+||++||++++...|..+.+.|++ +||.|+.+|+||+|.+.... ..+++.+++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~----------------------~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~ 53 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE----------------------QGYAVVAFDYPGHGDSDGAD-----AVERVLADI 53 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH----------------------TTEEEEEESCTTSTTSHHSH-----HHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH----------------------CCCEEEEEecCCCCccchhH-----HHHHHHHHH
Confidence 589999999999999999999998 79999999999999883211 233333333
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccC
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLD 197 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (367)
. .+..+.+++.++|||+||.+++.++.++ .+++++|++++.. .
T Consensus 54 ~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~-------~--------------------------- 96 (145)
T PF12695_consen 54 R--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP-------D--------------------------- 96 (145)
T ss_dssp H--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS-------G---------------------------
T ss_pred H--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc-------c---------------------------
Confidence 2 1123668999999999999999999998 6899999999620 0
Q ss_pred ccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcH
Q 017731 198 THYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQI 277 (367)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~ 277 (367)
.+.+...++|+++++|++|.+++.
T Consensus 97 --------------------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~ 120 (145)
T PF12695_consen 97 --------------------------------------------------------SEDLAKIRIPVLFIHGENDPLVPP 120 (145)
T ss_dssp --------------------------------------------------------CHHHTTTTSEEEEEEETT-SSSHH
T ss_pred --------------------------------------------------------hhhhhccCCcEEEEEECCCCcCCH
Confidence 023445567999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEcCC-CCc
Q 017731 278 CYARRLAEKLYPVARMIDLPG-GHL 301 (367)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~g-gH~ 301 (367)
+..+++.+.+..+.+++++++ +|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 121 EQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 999999998866789999998 895
No 62
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.81 E-value=2.3e-19 Score=150.41 Aligned_cols=247 Identities=18% Similarity=0.187 Sum_probs=147.4
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..|.++++||.|.+.-.|..+...|... ...+|+++|+||||++...+. .+.+.+.++
T Consensus 73 ~gpil~l~HG~G~S~LSfA~~a~el~s~---------------------~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~ 130 (343)
T KOG2564|consen 73 EGPILLLLHGGGSSALSFAIFASELKSK---------------------IRCRCLALDLRGHGETKVENE-DDLSLETMS 130 (343)
T ss_pred CccEEEEeecCcccchhHHHHHHHHHhh---------------------cceeEEEeeccccCccccCCh-hhcCHHHHH
Confidence 4568999999999999999999999873 367889999999999987665 578999999
Q ss_pred HHHHHHHHHhC---CceEEEEEeChhHHHHHHHHHh--CCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChh
Q 017731 115 KDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (367)
Q Consensus 115 ~dl~~~l~~~~---~~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (367)
+|+-++++.+- ..+++||||||||.++.+.|.. -|. +.|+++++.. .......+.....+++.....
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV-------EgtAmeAL~~m~~fL~~rP~~ 202 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV-------EGTAMEALNSMQHFLRNRPKS 202 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe-------chHHHHHHHHHHHHHhcCCcc
Confidence 99999999873 3579999999999999988764 465 8999999975 223333344444444443332
Q ss_pred hhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhh-cCccc--cccccchhhhhhccccChHHHHHhHhcCccEEE
Q 017731 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISA-TGMQS--NYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (367)
.......-.|-.+....+.... .............. ....+ ...-..+....|...+ .+..-...+|-++
T Consensus 203 F~Si~~Ai~W~v~sg~~Rn~~S---ArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gL----S~~Fl~~p~~klL 275 (343)
T KOG2564|consen 203 FKSIEDAIEWHVRSGQLRNRDS---ARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGL----SDKFLGLPVPKLL 275 (343)
T ss_pred ccchhhHHHHHhcccccccccc---ceEecchheeeccCCCcEEEEeeccccchhHHHHHhhh----hhHhhCCCcccee
Confidence 2221111000000000000000 00000000000000 00000 0000011111122111 1233345677777
Q ss_pred EeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 267 i~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
|.+..|..-..-..-+ .....++.+++. ||+++.+.|..++..+..|+.++.
T Consensus 276 ilAg~d~LDkdLtiGQ----MQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn~ 328 (343)
T KOG2564|consen 276 ILAGVDRLDKDLTIGQ----MQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRNR 328 (343)
T ss_pred EEecccccCcceeeee----eccceeeeeecccCceeccCCcchHHHHHHHHHhhhc
Confidence 7776665432111111 124568888986 999999999999999999998875
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.78 E-value=2.5e-17 Score=170.59 Aligned_cols=261 Identities=17% Similarity=0.186 Sum_probs=144.4
Q ss_pred CCeEEEEcCCCCCccchHHh-----HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCH
Q 017731 36 PTKVILITGLAGTHDAWGPQ-----LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~-----~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (367)
.++|||+||++.+...|+.. ++.|.+ +||+|+++|+ |.++.+......++
T Consensus 67 ~~plllvhg~~~~~~~~d~~~~~s~v~~L~~----------------------~g~~v~~~d~---G~~~~~~~~~~~~l 121 (994)
T PRK07868 67 GPPVLMVHPMMMSADMWDVTRDDGAVGILHR----------------------AGLDPWVIDF---GSPDKVEGGMERNL 121 (994)
T ss_pred CCcEEEECCCCCCccceecCCcccHHHHHHH----------------------CCCEEEEEcC---CCCChhHcCccCCH
Confidence 36799999999999999865 788877 6999999995 66655433224577
Q ss_pred HHHHHHHHHHHHH---hCCceEEEEEeChhHHHHHHHHHhC-CcceeEEEEeccCCCCCCCCCc-cchhhHHH----HH-
Q 017731 111 KIMAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMV-PERVLSLALLNVTGGGFQCCPK-LDLQTLSI----AI- 180 (367)
Q Consensus 111 ~~~~~dl~~~l~~---~~~~~v~lvGhS~Gg~~a~~~a~~~-p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~----~~- 180 (367)
.+++..+.+.++. +..++++++||||||.+++.+++.+ +++|+++|+++++.......+. +....... ..
T Consensus 122 ~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 201 (994)
T PRK07868 122 ADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMAD 201 (994)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchh
Confidence 7777777666654 3446899999999999999998755 5689999998887422111010 00000000 00
Q ss_pred HHhhc-cChhhhh--hc-ccCcc-ccH---HHHHHHhCCCc-hhhHhHHHHHHhhhhcCccccccccchhhhhhccc--c
Q 017731 181 RFFRA-KTPEKRA--AV-DLDTH-YSQ---EYLEEYVGSST-RRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK--M 249 (367)
Q Consensus 181 ~~~~~-~~~~~~~--~~-~~~~~-~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 249 (367)
..... ..+.... .. ..... ... .++........ ........+........ .....+...+..++..+ .
T Consensus 202 ~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~-~~g~~~~~~~~~~~~~n~~~ 280 (994)
T PRK07868 202 HVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIA-WSGPAISELLKQFIAHNRMM 280 (994)
T ss_pred hhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccc-cchHHHHHHHHHHHHhCccc
Confidence 00000 0000000 00 00000 000 00000000000 00000011110000000 00000000111111000 0
Q ss_pred C-----hHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEE-EEcCC-CCccccc---ChHHHHHHHHHHHh
Q 017731 250 T-----QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARM-IDLPG-GHLVSHE---RTEEVNQALIDLIK 319 (367)
Q Consensus 250 ~-----~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~-~~~~g-gH~~~~e---~p~~~~~~i~~fl~ 319 (367)
. ......++++++|+|+|+|++|.++|++.++.+.+.+ +++++ .++++ ||+.++- .+++++..|.+||+
T Consensus 281 ~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i-~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 281 TGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA-PNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred CceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC-CCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 0 0011247889999999999999999999999999876 78876 45565 9987654 67889999999999
Q ss_pred hhcc
Q 017731 320 ASEK 323 (367)
Q Consensus 320 ~~~~ 323 (367)
+...
T Consensus 360 ~~~~ 363 (994)
T PRK07868 360 WLEG 363 (994)
T ss_pred Hhcc
Confidence 8753
No 64
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.76 E-value=3e-17 Score=136.80 Aligned_cols=220 Identities=15% Similarity=0.137 Sum_probs=149.7
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
++.++++|-.|+++..|+.+...|.. ...++++.+||+|.--... ...+++.+++
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~~~lp~-----------------------~iel~avqlPGR~~r~~ep--~~~di~~Lad 61 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWSRRLPA-----------------------DIELLAVQLPGRGDRFGEP--LLTDIESLAD 61 (244)
T ss_pred CceEEEecCCCCCHHHHHHHHhhCCc-----------------------hhheeeecCCCcccccCCc--ccccHHHHHH
Confidence 34699999999999999999999886 7999999999999875444 4668999999
Q ss_pred HHHHHHH-HhCCceEEEEEeChhHHHHHHHHHhCCc---ceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhh
Q 017731 116 DVIALMD-HLGWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (367)
Q Consensus 116 dl~~~l~-~~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (367)
.+...+. -..-+++.++||||||++|+++|.+... .+..+.+.++..+.......+....-
T Consensus 62 ~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D--------------- 126 (244)
T COG3208 62 ELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDD--------------- 126 (244)
T ss_pred HHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCH---------------
Confidence 9998888 4555789999999999999999987421 26677777765442222121111111
Q ss_pred hhcccCccccHHHHHHHhCCCchh------hHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEE
Q 017731 192 AAVDLDTHYSQEYLEEYVGSSTRR------AILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVS 265 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl 265 (367)
.+++.....-.... .+..+-++..+ +.+...... +. . ..-..++||+.
T Consensus 127 ----------~~~l~~l~~lgG~p~e~led~El~~l~LPil-RAD~~~~e~--------Y~--~-----~~~~pl~~pi~ 180 (244)
T COG3208 127 ----------ADFLADLVDLGGTPPELLEDPELMALFLPIL-RADFRALES--------YR--Y-----PPPAPLACPIH 180 (244)
T ss_pred ----------HHHHHHHHHhCCCChHHhcCHHHHHHHHHHH-HHHHHHhcc--------cc--c-----CCCCCcCcceE
Confidence 11111111110000 00111111100 000000000 00 0 01145679999
Q ss_pred EEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhhh
Q 017731 266 VIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 266 ii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
++.|++|..+..+....|.+......+++.++|||+...++.+++.+.|.+.++..
T Consensus 181 ~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l~~~ 236 (244)
T COG3208 181 AFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHLAHH 236 (244)
T ss_pred EeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHhhhh
Confidence 99999999999999999999876689999999999999999999999999998653
No 65
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=2.8e-17 Score=137.89 Aligned_cols=193 Identities=23% Similarity=0.264 Sum_probs=134.6
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
.+++++.||...+-.....+...|... -+++++++|++|+|.|...+. ..+..+.++
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~---------------------ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~ 116 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIF---------------------LNCNVVSYDYSGYGRSSGKPS--ERNLYADIK 116 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhc---------------------ccceEEEEecccccccCCCcc--cccchhhHH
Confidence 478999999977666555555566542 279999999999999997663 223333344
Q ss_pred HHHHHHHHh-C-CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhh
Q 017731 116 DVIALMDHL-G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAA 193 (367)
Q Consensus 116 dl~~~l~~~-~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (367)
.+.+.++.- | .++++|+|+|+|+..++.+|.+.| +.++||.+|...+.. .+.... .
T Consensus 117 avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r---------------v~~~~~---~-- 174 (258)
T KOG1552|consen 117 AVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR---------------VAFPDT---K-- 174 (258)
T ss_pred HHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh---------------hhccCc---c--
Confidence 444444433 3 578999999999999999999998 999999998631110 000000 0
Q ss_pred cccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCc
Q 017731 194 VDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDV 273 (367)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~ 273 (367)
. . +.+. .....+.++.++||+|++||++|.
T Consensus 175 ---------------------~-------------~-----~~~d-----------~f~~i~kI~~i~~PVLiiHgtdDe 204 (258)
T KOG1552|consen 175 ---------------------T-------------T-----YCFD-----------AFPNIEKISKITCPVLIIHGTDDE 204 (258)
T ss_pred ---------------------e-------------E-----Eeec-----------cccccCcceeccCCEEEEecccCc
Confidence 0 0 0000 001135678889999999999999
Q ss_pred cCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhccC
Q 017731 274 IAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 274 ~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~~~ 324 (367)
+++..+..++.+......+-.++.| ||.-. +...++.+.+..|+...++.
T Consensus 205 vv~~sHg~~Lye~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 205 VVDFSHGKALYERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred eecccccHHHHHhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHHHhccc
Confidence 9999999999998744456667777 88875 44557778888998877654
No 66
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=7.4e-18 Score=136.21 Aligned_cols=217 Identities=17% Similarity=0.179 Sum_probs=146.6
Q ss_pred ccccCCcEEEEEEe--cCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC
Q 017731 19 ALNDNGIKIFYRTY--GRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (367)
Q Consensus 19 ~~~~~g~~l~~~~~--g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (367)
..+.|.++++-... .++.|+++++|+..++-...-+.+.-+-.. -+.+|+.+++||+
T Consensus 59 l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~---------------------l~mnv~ivsYRGY 117 (300)
T KOG4391|consen 59 LRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVN---------------------LKMNVLIVSYRGY 117 (300)
T ss_pred EEcCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHH---------------------cCceEEEEEeecc
Confidence 45667777764332 357789999999999988777766655432 3889999999999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCc
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (367)
|.|+..+.+.. +.-|-.++++.+ ...++++.|-|+||++|+.+|++..+++.++|+-+....-
T Consensus 118 G~S~GspsE~G-----L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI------ 186 (300)
T KOG4391|consen 118 GKSEGSPSEEG-----LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI------ 186 (300)
T ss_pred ccCCCCccccc-----eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc------
Confidence 99997764322 222333444433 4458999999999999999999999999999999875211
Q ss_pred cchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccC
Q 017731 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (367)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
+..... .-..+...++..+.... .
T Consensus 187 -p~~~i~------------------~v~p~~~k~i~~lc~kn-------------------------------------~ 210 (300)
T KOG4391|consen 187 -PHMAIP------------------LVFPFPMKYIPLLCYKN-------------------------------------K 210 (300)
T ss_pred -hhhhhh------------------eeccchhhHHHHHHHHh-------------------------------------h
Confidence 000000 00000111111111000 0
Q ss_pred hHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhccC
Q 017731 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~~~ 324 (367)
......+...+.|.|+|.|.+|.++||...+.+.+.++ ...++.++|+ .|.-..- .+-..+.|.+||.+....
T Consensus 211 ~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 211 WLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred hcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 01113345667899999999999999999999999873 3678999997 8876543 356789999999987654
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.75 E-value=6.2e-17 Score=140.06 Aligned_cols=176 Identities=15% Similarity=0.125 Sum_probs=117.2
Q ss_pred CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC---------
Q 017731 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK--------- 104 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~--------- 104 (367)
+..|+||++||+|++...|.++.+.|.. .++.+..++.+|...+.....
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~----------------------~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~ 71 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAP----------------------AFPDALVVSVGGPEPSGNGAGRQWFSVQGI 71 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHH----------------------HCCCCEEECCCCCCCcCCCCCcccccCCCC
Confidence 4556899999999999999999999986 344444444555432211000
Q ss_pred CCCC---CHHHHHHHHHHHH----HHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhh
Q 017731 105 KTEY---TTKIMAKDVIALM----DHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQT 175 (367)
Q Consensus 105 ~~~~---~~~~~~~dl~~~l----~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 175 (367)
.... ...+..+.+.+++ +..++ ++++++|||+||.+++.++.++|+.+.+++.+++... ...
T Consensus 72 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~------~~~--- 142 (232)
T PRK11460 72 TEDNRQARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA------SLP--- 142 (232)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc------ccc---
Confidence 0001 1122223333333 33343 5799999999999999999999988888887765310 000
Q ss_pred HHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHH
Q 017731 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (367)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (367)
T Consensus 143 -------------------------------------------------------------------------------- 142 (232)
T PRK11460 143 -------------------------------------------------------------------------------- 142 (232)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHhcCccEEEEeecCCccCcHHHHHHHHHHhc---CCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 256 ~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
.....+.|++++||++|+++|.+.++++.+.+. .+++++.+++ ||.+..+..+.+.+.|.++|..
T Consensus 143 ~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 143 ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 000124699999999999999999988888772 3567888897 9999776666666666666643
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.74 E-value=1.4e-15 Score=129.32 Aligned_cols=111 Identities=30% Similarity=0.388 Sum_probs=97.7
Q ss_pred EEEEec-CCCC--eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC
Q 017731 28 FYRTYG-RGPT--KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK 104 (367)
Q Consensus 28 ~~~~~g-~~~p--~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~ 104 (367)
-|.+.. +|.| +||-+||-++++.+|..+.+.|.+ .|+|+|.+++||+|.++.+..
T Consensus 24 ~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~----------------------~~iR~I~iN~PGf~~t~~~~~ 81 (297)
T PF06342_consen 24 VYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDE----------------------AGIRFIGINYPGFGFTPGYPD 81 (297)
T ss_pred EEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHH----------------------cCeEEEEeCCCCCCCCCCCcc
Confidence 355553 3444 799999999999999999999999 799999999999999998776
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCc-eEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 105 KTEYTTKIMAKDVIALMDHLGWK-QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~~~~~-~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
..++-.+....+.++++.++++ +++.+|||.||-.|+++|..+| +.|+++++|++.
T Consensus 82 -~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 82 -QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred -cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 6788999999999999999986 6888999999999999999996 679999999863
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.71 E-value=1.9e-16 Score=138.43 Aligned_cols=103 Identities=21% Similarity=0.227 Sum_probs=85.2
Q ss_pred CCeEEEEcCCCCCc----cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHH
Q 017731 36 PTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (367)
Q Consensus 36 ~p~vv~lHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (367)
+|+||++||++... ..|..+++.|++ +||+|+++|+||||.|..... ..+++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~----------------------~Gy~Vl~~Dl~G~G~S~g~~~--~~~~~ 80 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA----------------------GGFGVLQIDLYGCGDSAGDFA--AARWD 80 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH----------------------CCCEEEEECCCCCCCCCCccc--cCCHH
Confidence 46799999998753 456677888887 699999999999999976542 45777
Q ss_pred HHHHHHHHHH---HHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 112 IMAKDVIALM---DHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 112 ~~~~dl~~~l---~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
.+++|+..++ ++.+.++++++||||||.+++.+|.++|++++++|+++|..
T Consensus 81 ~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 81 VWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 8888877654 44566899999999999999999999999999999999763
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=99.71 E-value=2.2e-15 Score=134.43 Aligned_cols=117 Identities=22% Similarity=0.317 Sum_probs=80.3
Q ss_pred CcEEEEEEe------cCCCCeEEEEcCCCCCccchHH---hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 24 GIKIFYRTY------GRGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 24 g~~l~~~~~------g~~~p~vv~lHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
+..+.|..+ +++.|+|+++||++++...|.. +...+.. .|+.|+.+|..
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~----------------------~g~~Vv~pd~~ 86 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA----------------------RGIALVAPDTS 86 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh----------------------cCeEEEecCCC
Confidence 455666554 2355899999999988876643 2344444 59999999988
Q ss_pred CCCC-----CCC-----C-------C-C------CCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCc
Q 017731 95 GMGR-----SSV-----P-------V-K------KTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 95 G~G~-----S~~-----~-------~-~------~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
++|. +.. . . . ...+-.+++.+.+....+.++.++++++||||||..++.++.++|+
T Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~ 166 (283)
T PLN02442 87 PRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD 166 (283)
T ss_pred CCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch
Confidence 7662 110 0 0 0 0011133444444444455677889999999999999999999999
Q ss_pred ceeEEEEeccCC
Q 017731 151 RVLSLALLNVTG 162 (367)
Q Consensus 151 ~v~~lvl~~~~~ 162 (367)
++++++.+++..
T Consensus 167 ~~~~~~~~~~~~ 178 (283)
T PLN02442 167 KYKSVSAFAPIA 178 (283)
T ss_pred hEEEEEEECCcc
Confidence 999999998763
No 71
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.68 E-value=4.5e-15 Score=146.06 Aligned_cols=227 Identities=21% Similarity=0.201 Sum_probs=145.6
Q ss_pred cccccCCcEEEEEEecC---C----CCeEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 18 AALNDNGIKIFYRTYGR---G----PTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~---~----~p~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
.+...||.+++.....+ + -|+||++||.+.... .|....+.|+. +||.|
T Consensus 369 ~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~----------------------~G~~V 426 (620)
T COG1506 369 TYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS----------------------AGYAV 426 (620)
T ss_pred EEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc----------------------CCeEE
Confidence 44556888888776642 2 278999999976554 46677778887 79999
Q ss_pred EeeCCCCCCCCC-----CCC-CCCCCCHHHHHHHHHHHHHHhCC---ceEEEEEeChhHHHHHHHHHhCCcceeEEEEec
Q 017731 89 CAFDNRGMGRSS-----VPV-KKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (367)
Q Consensus 89 i~~D~~G~G~S~-----~~~-~~~~~~~~~~~~dl~~~l~~~~~---~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (367)
+.++.||.+.-. ... +......+++.+.+. ++.+.+. +++.+.|||+||.+++..+.+.| .+++.+...
T Consensus 427 ~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~ 504 (620)
T COG1506 427 LAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVA 504 (620)
T ss_pred EEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEecc
Confidence 999999765421 111 112335666666666 5555433 58999999999999999999988 677766666
Q ss_pred cCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccc
Q 017731 160 VTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG 239 (367)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
+...... .........+. ...+...........+
T Consensus 505 ~~~~~~~---------------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-------------------- 538 (620)
T COG1506 505 GGVDWLL---------------YFGESTEGLRF-----------DPEENGGGPPEDREKY-------------------- 538 (620)
T ss_pred Ccchhhh---------------hccccchhhcC-----------CHHHhCCCcccChHHH--------------------
Confidence 5421000 00000000000 0000000000000000
Q ss_pred hhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCcccc-cChHHHHHHH
Q 017731 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVNQAL 314 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-e~p~~~~~~i 314 (367)
..........++++|+|+|||++|..+|.+.+.++.+.+ ...++++++|+ +|.+.. ++...+.+.+
T Consensus 539 ---------~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 539 ---------EDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred ---------HhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 001223456788899999999999999999999998887 34678999998 998876 4567788888
Q ss_pred HHHHhhhcc
Q 017731 315 IDLIKASEK 323 (367)
Q Consensus 315 ~~fl~~~~~ 323 (367)
.+|+++..+
T Consensus 610 ~~~~~~~~~ 618 (620)
T COG1506 610 LDWFKRHLK 618 (620)
T ss_pred HHHHHHHhc
Confidence 889887654
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.68 E-value=2.1e-14 Score=127.79 Aligned_cols=119 Identities=22% Similarity=0.294 Sum_probs=82.8
Q ss_pred CCcEEEEEEec------CCCCeEEEEcCCCCCccchHH--hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC-
Q 017731 23 NGIKIFYRTYG------RGPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN- 93 (367)
Q Consensus 23 ~g~~l~~~~~g------~~~p~vv~lHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~- 93 (367)
-+..+.|..+- ++.|+|+++||++++...|.. .+..++.. .|+.|+++|.
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~---------------------~g~~Vv~Pd~~ 81 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE---------------------HGLALVAPDTS 81 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh---------------------cCcEEEEeCCC
Confidence 34555555442 235789999999999887743 23444431 4899999998
Q ss_pred -CCCCCCCCCC------------------CCCCCCHHH-HHHHHHHHHHH---hCCceEEEEEeChhHHHHHHHHHhCCc
Q 017731 94 -RGMGRSSVPV------------------KKTEYTTKI-MAKDVIALMDH---LGWKQAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 94 -~G~G~S~~~~------------------~~~~~~~~~-~~~dl~~~l~~---~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
+|+|.+.... ....++..+ .++++..++++ ++.++++++||||||.+++.++.++|+
T Consensus 82 ~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~ 161 (275)
T TIGR02821 82 PRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD 161 (275)
T ss_pred CCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc
Confidence 5555432110 001223333 46778787776 355689999999999999999999999
Q ss_pred ceeEEEEeccCC
Q 017731 151 RVLSLALLNVTG 162 (367)
Q Consensus 151 ~v~~lvl~~~~~ 162 (367)
.+++++++++..
T Consensus 162 ~~~~~~~~~~~~ 173 (275)
T TIGR02821 162 RFKSVSAFAPIV 173 (275)
T ss_pred cceEEEEECCcc
Confidence 999999998763
No 73
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.67 E-value=2.2e-15 Score=121.92 Aligned_cols=217 Identities=18% Similarity=0.254 Sum_probs=134.3
Q ss_pred CeEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 37 TKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 37 p~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..+|++||+-++.. ....++..|.+ .|+.++.+|++|.|.|+..-....+ ...+
T Consensus 34 e~vvlcHGfrS~Kn~~~~~~vA~~~e~----------------------~gis~fRfDF~GnGeS~gsf~~Gn~--~~ea 89 (269)
T KOG4667|consen 34 EIVVLCHGFRSHKNAIIMKNVAKALEK----------------------EGISAFRFDFSGNGESEGSFYYGNY--NTEA 89 (269)
T ss_pred eEEEEeeccccccchHHHHHHHHHHHh----------------------cCceEEEEEecCCCCcCCccccCcc--cchH
Confidence 37999999998874 34566778887 6999999999999999876543334 3446
Q ss_pred HHHHHHHHHhCCc-e--EEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhh
Q 017731 115 KDVIALMDHLGWK-Q--AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (367)
Q Consensus 115 ~dl~~~l~~~~~~-~--v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (367)
+|+..+++++... + -+++|||-||.+++.+|.++.+ ++-+|.+++-..... ... ..+
T Consensus 90 dDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~--------~I~---eRl-------- 149 (269)
T KOG4667|consen 90 DDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN--------GIN---ERL-------- 149 (269)
T ss_pred HHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc--------chh---hhh--------
Confidence 9999999998543 3 3678999999999999999987 777777765421100 000 000
Q ss_pred hhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCcc-ccccccchhhhhhccccChHHHHHhHh--cCccEEEEe
Q 017731 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQ-SNYGFDGQIHACWMHKMTQKDIQTIRS--AGFLVSVIH 268 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~ 268 (367)
.+.+++..... ++.....+ ..+. ......+....+..+..+...+ .+||||-+|
T Consensus 150 ---------g~~~l~~ike~-------------Gfid~~~rkG~y~-~rvt~eSlmdrLntd~h~aclkId~~C~VLTvh 206 (269)
T KOG4667|consen 150 ---------GEDYLERIKEQ-------------GFIDVGPRKGKYG-YRVTEESLMDRLNTDIHEACLKIDKQCRVLTVH 206 (269)
T ss_pred ---------cccHHHHHHhC-------------CceecCcccCCcC-ceecHHHHHHHHhchhhhhhcCcCccCceEEEe
Confidence 00000000000 00000000 0000 0000111111112222233333 369999999
Q ss_pred ecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 269 G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
|..|.++|.+.+..+++.+ ++.++.+++| .|..... ..+.......|.+...
T Consensus 207 Gs~D~IVPve~AkefAk~i-~nH~L~iIEgADHnyt~~-q~~l~~lgl~f~k~r~ 259 (269)
T KOG4667|consen 207 GSEDEIVPVEDAKEFAKII-PNHKLEIIEGADHNYTGH-QSQLVSLGLEFIKTRI 259 (269)
T ss_pred ccCCceeechhHHHHHHhc-cCCceEEecCCCcCccch-hhhHhhhcceeEEeee
Confidence 9999999999999999987 8899999999 8876543 3455555555555443
No 74
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.67 E-value=3.2e-15 Score=128.05 Aligned_cols=184 Identities=22% Similarity=0.256 Sum_probs=111.9
Q ss_pred CCeEEEeeCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEE
Q 017731 84 AGIEVCAFDNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 155 (367)
+||.|+.+|+||.+....... .....-...++|+.+.++.+ +.+++.++|||+||.+++.++.++|++++++
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~ 92 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAA 92 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEE
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeee
Confidence 799999999999874321100 00111223345555555443 3368999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccc
Q 017731 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (367)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
+..++............. +......... ........+...
T Consensus 93 v~~~g~~d~~~~~~~~~~--------------------------~~~~~~~~~~-~~~~~~~~~~~~------------- 132 (213)
T PF00326_consen 93 VAGAGVSDLFSYYGTTDI--------------------------YTKAEYLEYG-DPWDNPEFYREL------------- 132 (213)
T ss_dssp EEESE-SSTTCSBHHTCC--------------------------HHHGHHHHHS-STTTSHHHHHHH-------------
T ss_pred eccceecchhcccccccc--------------------------cccccccccC-ccchhhhhhhhh-------------
Confidence 999986321110000000 0000111110 000011111110
Q ss_pred cccchhhhhhccccChHHHHHhHh--cCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCccc-ccChH
Q 017731 236 GFDGQIHACWMHKMTQKDIQTIRS--AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVS-HERTE 308 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~--i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~-~e~p~ 308 (367)
.....+.+ +++|+|++||++|..+|++.+.++.+.+ ...++++++|+ ||.+. .+...
T Consensus 133 ----------------s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 133 ----------------SPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp ----------------HHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred ----------------ccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 00112333 6789999999999999999999988877 23588999998 99555 34566
Q ss_pred HHHHHHHHHHhhhcc
Q 017731 309 EVNQALIDLIKASEK 323 (367)
Q Consensus 309 ~~~~~i~~fl~~~~~ 323 (367)
++.+.+.+|+++..+
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 888999999988654
No 75
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.67 E-value=4.7e-15 Score=127.78 Aligned_cols=261 Identities=16% Similarity=0.160 Sum_probs=148.6
Q ss_pred cccCCcEEEEEEecC---CCCeEEEEcCCCCCccc-hHHhH-----HhhcCCCCCCCCchhhhcccccCCCCCCCeEEEe
Q 017731 20 LNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCA 90 (367)
Q Consensus 20 ~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~-~~~~~-----~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~ 90 (367)
++..-..+++...|+ ++|++|-.|-.|.+... |..+. ..+.+ .+.++-
T Consensus 4 v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-----------------------~f~i~H 60 (283)
T PF03096_consen 4 VETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-----------------------NFCIYH 60 (283)
T ss_dssp EEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-----------------------TSEEEE
T ss_pred eccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-----------------------ceEEEE
Confidence 444556788888884 37899999999988765 66554 45555 899999
Q ss_pred eCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCC
Q 017731 91 FDNRGMGRSSVP--VKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (367)
Q Consensus 91 ~D~~G~G~S~~~--~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (367)
+|.||+...... .+...-|++++++++.+++++++++.++-+|--.||.+..++|..+|++|.|+||+++.+..
T Consensus 61 i~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~---- 136 (283)
T PF03096_consen 61 IDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA---- 136 (283)
T ss_dssp EE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----
T ss_pred EeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC----
Confidence 999999775533 32234589999999999999999999999999999999999999999999999999987422
Q ss_pred CccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCch--hhHhHHHHHHhhhhcCccccccccchhhhhhc
Q 017731 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIHACWM 246 (367)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (367)
+.+..+...+...+.. ...........-.+..+++.... ..+..+.+...+...... ......+.++..
T Consensus 137 ~gw~Ew~~~K~~~~~L-------~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np--~Nl~~f~~sy~~ 207 (283)
T PF03096_consen 137 AGWMEWFYQKLSSWLL-------YSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINP--KNLALFLNSYNS 207 (283)
T ss_dssp --HHHHHHHHHH--------------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTH--HHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhcccc-------cccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCH--HHHHHHHHHHhc
Confidence 1111111111111000 00001111111122333332221 223344444444322110 111111222211
Q ss_pred cccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc-CCcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 247 HKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY-PVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 247 ~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~-~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
..+.........||+|++.|+..+.. +.+..+..++. .+.++..+++ |=.+..|+|+.+++.+.=||+..
T Consensus 208 ---R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 208 ---RTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp --------SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHHT
T ss_pred ---cccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHccC
Confidence 11222334566799999999988875 45667777773 4678888887 99999999999999999999864
No 76
>PLN00021 chlorophyllase
Probab=99.64 E-value=5.9e-15 Score=132.53 Aligned_cols=103 Identities=15% Similarity=0.075 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..|+||++||++.+...|..+++.|++ +||.|+++|++|++.+.... ...+..+..
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las----------------------~G~~VvapD~~g~~~~~~~~--~i~d~~~~~ 106 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIAS----------------------HGFIVVAPQLYTLAGPDGTD--EIKDAAAVI 106 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHh----------------------CCCEEEEecCCCcCCCCchh--hHHHHHHHH
Confidence 447899999999999999999999998 69999999999865432111 011122223
Q ss_pred HHHHHHHHH-------hCCceEEEEEeChhHHHHHHHHHhCCc-----ceeEEEEeccC
Q 017731 115 KDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (367)
Q Consensus 115 ~dl~~~l~~-------~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~ 161 (367)
+.+.+.++. .+.++++++|||+||.+++.+|.++++ +++++|++++.
T Consensus 107 ~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 107 NWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred HHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 333332222 234689999999999999999998874 68999999875
No 77
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.64 E-value=3.2e-14 Score=120.85 Aligned_cols=267 Identities=16% Similarity=0.158 Sum_probs=170.3
Q ss_pred ccccccCCcEEEEEEecC---CCCeEEEEcCCCCCccc-hHHhH-----HhhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 017731 17 DAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDA-WGPQL-----KGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (367)
Q Consensus 17 ~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~-~~~~~-----~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (367)
+..++..-..+++...|+ ++|++|-.|..|.++.. |..++ ..+.+ .+.
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-----------------------~fc 80 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-----------------------HFC 80 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-----------------------heE
Confidence 344444456788888874 46789999999988755 65543 34444 599
Q ss_pred EEeeCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 88 VCAFDNRGMGRSSV--PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 88 vi~~D~~G~G~S~~--~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
|+-+|.|||-.... +.+...-|+++++++|..++++++.+.++-+|--.||.+..++|..||++|.||||+++.+..
T Consensus 81 v~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a- 159 (326)
T KOG2931|consen 81 VYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCA- 159 (326)
T ss_pred EEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCC-
Confidence 99999999965543 333234589999999999999999999999999999999999999999999999999987422
Q ss_pred CCCCccchhhHHHHHH-HhhccChhhhhhcccCccccHHHHHHHhCCCch--hhHhHHHHHHhhhhcCccccccccchhh
Q 017731 166 QCCPKLDLQTLSIAIR-FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR--RAILYQEYVKGISATGMQSNYGFDGQIH 242 (367)
Q Consensus 166 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (367)
+.+..+...+... ++.. .........-.+...++.... ..+..+++...+....... .....+.
T Consensus 160 ---~gwiew~~~K~~s~~l~~--------~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~--Nl~~fl~ 226 (326)
T KOG2931|consen 160 ---KGWIEWAYNKVSSNLLYY--------YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPK--NLALFLN 226 (326)
T ss_pred ---chHHHHHHHHHHHHHHHh--------hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChh--HHHHHHH
Confidence 1122222222111 1110 001111111223333333222 3445556655554432211 1112222
Q ss_pred hhhccccChHHHH-HhHhcCccEEEEeecCCccCcHHHHHHHHHHh-cCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 243 ACWMHKMTQKDIQ-TIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 243 ~~~~~~~~~~~~~-~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
++..+..-..... ....++||+|++.|++.+.+ +.+..+..++ +.+..+..+.+ |-.+..++|..+++.+.=|++
T Consensus 227 ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 227 AYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred HhcCCCCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 2222211111111 11256799999999988875 3455566666 34678888887 999999999999999999998
Q ss_pred hhc
Q 017731 320 ASE 322 (367)
Q Consensus 320 ~~~ 322 (367)
..-
T Consensus 305 G~G 307 (326)
T KOG2931|consen 305 GMG 307 (326)
T ss_pred cCC
Confidence 864
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.64 E-value=3.2e-14 Score=123.28 Aligned_cols=219 Identities=15% Similarity=0.191 Sum_probs=134.6
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCC-eEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
+|+|+|+.+++...|.++++.|.. . +.|+.++.+|.+.... ...+++++++.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------~~~~v~~i~~~~~~~~~~----~~~si~~la~~ 54 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------DVIGVYGIEYPGRGDDEP----PPDSIEELASR 54 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------TEEEEEEECSTTSCTTSH----EESSHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------CeEEEEEEecCCCCCCCC----CCCCHHHHHHH
Confidence 699999999999999999999997 5 9999999999983322 24589999999
Q ss_pred HHHHHHHhCCc-eEEEEEeChhHHHHHHHHHhC---CcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhh
Q 017731 117 VIALMDHLGWK-QAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRA 192 (367)
Q Consensus 117 l~~~l~~~~~~-~v~lvGhS~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (367)
..+.+.....+ +++|+|||+||.+|+++|.+. ...+..++++++..+...................+.......
T Consensus 55 y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 132 (229)
T PF00975_consen 55 YAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTP-- 132 (229)
T ss_dssp HHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHH--
T ss_pred HHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCc--
Confidence 99888877655 999999999999999999863 345999999997642211111111111110000000000000
Q ss_pred hcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCC
Q 017731 193 AVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHD 272 (367)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D 272 (367)
............+.+.+... ....... . ........+|.++.....|
T Consensus 133 -----------------~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~--~---~~~~~~~~~~~~~~~~~~~ 179 (229)
T PF00975_consen 133 -----------------DASLEDEELLARLLRALRDD-----------FQALENY--S---IRPIDKQKVPITLFYALDD 179 (229)
T ss_dssp -----------------HHHCHHHHHHHHHHHHHHHH-----------HHHHHTC--S----TTSSSESSEEEEEEECSS
T ss_pred -----------------hhhhcCHHHHHHHHHHHHHH-----------HHHHhhc--c---CCccccCCCcEEEEecCCC
Confidence 00000000011111110000 0000000 0 0000111467889999999
Q ss_pred ccCcHH---HHHHHHHHhcCCcEEEEcCCCCccccc-ChHHHHHHHHHHH
Q 017731 273 VIAQIC---YARRLAEKLYPVARMIDLPGGHLVSHE-RTEEVNQALIDLI 318 (367)
Q Consensus 273 ~~~p~~---~~~~~~~~~~~~~~~~~~~ggH~~~~e-~p~~~~~~i~~fl 318 (367)
+..... ....+.+......+++.++|+|+.++. +..++++.|.++|
T Consensus 180 ~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 180 PLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp SSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHSTTHHHHHHHHHHHH
T ss_pred ccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecchHHHHHHHHHhccC
Confidence 888766 344466655456789999999999887 7788999988875
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.64 E-value=3.9e-15 Score=127.65 Aligned_cols=179 Identities=22% Similarity=0.209 Sum_probs=103.5
Q ss_pred cCCCCeEEEEcCCCCCccchHHhHH-hhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC------CCC---CCCC
Q 017731 33 GRGPTKVILITGLAGTHDAWGPQLK-GLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG------MGR---SSVP 102 (367)
Q Consensus 33 g~~~p~vv~lHG~~~~~~~~~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G------~G~---S~~~ 102 (367)
++.+++||++||+|++.+.|..... .+.. ....++.+.-|- .|. +-.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~----------------------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~ 68 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLAL----------------------PNTRFISPRAPSRPVTVPGGYRMPAWFD 68 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCS----------------------TTEEEEEE---EEE-GGGTT-EEE-SS-
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccC----------------------CceEEEeccCCCCCcccccccCCCceee
Confidence 3456789999999999977666555 2222 245555554321 111 1000
Q ss_pred ----CCCC---CCCHHHHHHHHHHHHHHh-----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCc
Q 017731 103 ----VKKT---EYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 103 ----~~~~---~~~~~~~~~dl~~~l~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (367)
.... .-.+.+.++.+.++++.. ..+++++.|+|+||++++.++.++|+.+.++|++++..+.....
T Consensus 69 ~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~-- 146 (216)
T PF02230_consen 69 IYDFDPEGPEDEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL-- 146 (216)
T ss_dssp BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--
T ss_pred ccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--
Confidence 0000 112334444555555532 33589999999999999999999999999999999752110000
Q ss_pred cchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccC
Q 017731 171 LDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMT 250 (367)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (367)
T Consensus 147 -------------------------------------------------------------------------------- 146 (216)
T PF02230_consen 147 -------------------------------------------------------------------------------- 146 (216)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhh
Q 017731 251 QKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 251 ~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
..... ...+.|++++||.+|+++|.+.++...+.+ ..+.+++.+++ ||.... +..+.+.+||+++
T Consensus 147 ~~~~~--~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~----~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 147 EDRPE--ALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEISP----EELRDLREFLEKH 215 (216)
T ss_dssp HCCHC--CCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--H----HHHHHHHHHHHHH
T ss_pred ccccc--ccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCCH----HHHHHHHHHHhhh
Confidence 00000 011579999999999999999888888776 23678999996 998763 4445566676653
No 80
>COG0400 Predicted esterase [General function prediction only]
Probab=99.62 E-value=7.6e-15 Score=122.68 Aligned_cols=169 Identities=21% Similarity=0.179 Sum_probs=114.8
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC--CCCCCCCCC--CCCCC--
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR--GMGRSSVPV--KKTEY-- 108 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~--G~G~S~~~~--~~~~~-- 108 (367)
..|+||++||+|++...+.++...+.. .+.++.+--+ -.|...... ....+
T Consensus 17 ~~~~iilLHG~Ggde~~~~~~~~~~~P-----------------------~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ 73 (207)
T COG0400 17 AAPLLILLHGLGGDELDLVPLPELILP-----------------------NATLVSPRGPVAENGGPRFFRRYDEGSFDQ 73 (207)
T ss_pred CCcEEEEEecCCCChhhhhhhhhhcCC-----------------------CCeEEcCCCCccccCcccceeecCCCccch
Confidence 345799999999999988886666665 4555554211 011110000 01122
Q ss_pred -----CHHHHHHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHH
Q 017731 109 -----TTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIR 181 (367)
Q Consensus 109 -----~~~~~~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 181 (367)
..+.+++.+..+.++.++ ++++++|+|.||++++.+..++|+.+++++++++.......
T Consensus 74 edl~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~-------------- 139 (207)
T COG0400 74 EDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE-------------- 139 (207)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc--------------
Confidence 234445555556666666 68999999999999999999999999999999986311100
Q ss_pred HhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcC
Q 017731 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAG 261 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 261 (367)
..-....
T Consensus 140 -------------------------------------------------------------------------~~~~~~~ 146 (207)
T COG0400 140 -------------------------------------------------------------------------LLPDLAG 146 (207)
T ss_pred -------------------------------------------------------------------------cccccCC
Confidence 0001223
Q ss_pred ccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCCCCcccccChHHHHHH
Q 017731 262 FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPGGHLVSHERTEEVNQA 313 (367)
Q Consensus 262 ~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~ggH~~~~e~p~~~~~~ 313 (367)
.|+++++|+.|+++|...+.++.+.+ ..+++.+.+++||....+.-++..+.
T Consensus 147 ~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~~e~~~~~~~w 201 (207)
T COG0400 147 TPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIPPEELEAARSW 201 (207)
T ss_pred CeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCCHHHHHHHHHH
Confidence 69999999999999999888888776 34678888899998876655444443
No 81
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.61 E-value=1.7e-15 Score=131.51 Aligned_cols=245 Identities=16% Similarity=0.185 Sum_probs=129.2
Q ss_pred CCCeEEEEcCCCCCcc-ch-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHH
Q 017731 35 GPTKVILITGLAGTHD-AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKI 112 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~-~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~ 112 (367)
.+|.||++||+.++++ .| +.+.+.+.+ +||.|+++++|||+.+...... -|+ .-
T Consensus 74 ~~P~vVl~HGL~G~s~s~y~r~L~~~~~~----------------------rg~~~Vv~~~Rgcs~~~n~~p~-~yh-~G 129 (345)
T COG0429 74 KKPLVVLFHGLEGSSNSPYARGLMRALSR----------------------RGWLVVVFHFRGCSGEANTSPR-LYH-SG 129 (345)
T ss_pred CCceEEEEeccCCCCcCHHHHHHHHHHHh----------------------cCCeEEEEecccccCCcccCcc-eec-cc
Confidence 4578999999977653 33 567778887 7999999999999998764321 111 11
Q ss_pred HHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccCCCCCCCCCccchhhH-HH----HHH
Q 017731 113 MAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPKLDLQTL-SI----AIR 181 (367)
Q Consensus 113 ~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~-~~----~~~ 181 (367)
+.+|+..+++.+ ...++..+|.|+||.+...+..+..+ .+.+.+.++.+..-..+...++.... .. ..+
T Consensus 130 ~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~ 209 (345)
T COG0429 130 ETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR 209 (345)
T ss_pred chhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH
Confidence 225555554443 55789999999999555555444322 35555555543211111111111100 00 000
Q ss_pred HhhccChhhhhhcccCccccHHHHHHHhCCCchh-hHhHHHHH--HhhhhcCccccccccchhhhhhccccChHHHHHhH
Q 017731 182 FFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRR-AILYQEYV--KGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (367)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (367)
.+....... +..+-...... ....+... ..+...-.....++.+.... +.. ....+.+.
T Consensus 210 ~L~~~~~~k--------------l~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dY-Yr~---aSs~~~L~ 271 (345)
T COG0429 210 NLKRNAARK--------------LKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDY-YRQ---ASSLPLLP 271 (345)
T ss_pred HHHHHHHHH--------------HHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHH-HHh---cccccccc
Confidence 000000000 00000000000 00011000 00000000111122211111 111 12246678
Q ss_pred hcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcC-CCCccccc----ChH-HHHHHHHHHHhhh
Q 017731 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLP-GGHLVSHE----RTE-EVNQALIDLIKAS 321 (367)
Q Consensus 259 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~-ggH~~~~e----~p~-~~~~~i~~fl~~~ 321 (367)
+|.+|+|+|++.+|++++++..........+++.+..-+ |||..++. ++. -..+.|.+||+..
T Consensus 272 ~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 272 KIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred ccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 899999999999999999988777776556888888887 59988877 343 3456777777664
No 82
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.59 E-value=1.2e-13 Score=124.31 Aligned_cols=266 Identities=13% Similarity=0.152 Sum_probs=135.6
Q ss_pred ccCCcEEEEEEe--c--------CCCCeEEEEcCCCCCc-cch-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 21 NDNGIKIFYRTY--G--------RGPTKVILITGLAGTH-DAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 21 ~~~g~~l~~~~~--g--------~~~p~vv~lHG~~~~~-~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
..||..+..--. + ...|+||++||+.+++ +.| +.++..+.+ +||+|
T Consensus 100 ~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~----------------------~G~r~ 157 (409)
T KOG1838|consen 100 TSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQR----------------------KGYRV 157 (409)
T ss_pred eCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHh----------------------CCcEE
Confidence 457777665433 1 2458999999997766 344 455666665 69999
Q ss_pred EeeCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccCCCC
Q 017731 89 CAFDNRGMGRSSVPVKK--TEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGG 164 (367)
Q Consensus 89 i~~D~~G~G~S~~~~~~--~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~ 164 (367)
++++.||+|.+.-.... .....+|+.+.+..+.+.....++..+|.||||++.+.|..+..+ .+.+.+.++.+...
T Consensus 158 VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~ 237 (409)
T KOG1838|consen 158 VVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDL 237 (409)
T ss_pred EEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchh
Confidence 99999999999755431 111233333333334444455689999999999999999887543 24444444433211
Q ss_pred CCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCC-CchhhHhHHHHHHhhhhcCccccccccchhhh
Q 017731 165 FQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGS-STRRAILYQEYVKGISATGMQSNYGFDGQIHA 243 (367)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (367)
......+........+................ ..++++.... ...+....+++-+.+.. ..+++.. ...
T Consensus 238 ~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r-----~~~~~~~vd~d~~~~~~SvreFD~~~t~----~~~gf~~-~de 307 (409)
T KOG1838|consen 238 LAASRSIETPLYRRFYNRALTLNLKRIVLRHR-----HTLFEDPVDFDVILKSRSVREFDEALTR----PMFGFKS-VDE 307 (409)
T ss_pred hhhhhHHhcccchHHHHHHHHHhHHHHHhhhh-----hhhhhccchhhhhhhcCcHHHHHhhhhh----hhcCCCc-HHH
Confidence 10000000001111111100000000000000 0000000000 00011122222222211 1122222 122
Q ss_pred hhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHH-HHHHHhcCCcEEEEcC-CCCcccccC----hHHHHHH-HHH
Q 017731 244 CWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYAR-RLAEKLYPVARMIDLP-GGHLVSHER----TEEVNQA-LID 316 (367)
Q Consensus 244 ~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~-~~~~~~~~~~~~~~~~-ggH~~~~e~----p~~~~~~-i~~ 316 (367)
++.. ......+.+|++|+|+|++.+|+++|++..- ...+. .++.-+++-. |||..++|. +..+.+. +.+
T Consensus 308 YY~~---aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~-np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~e 383 (409)
T KOG1838|consen 308 YYKK---ASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKS-NPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVE 383 (409)
T ss_pred HHhh---cchhhhcccccccEEEEecCCCCCCCcccCCHHHHhc-CCcEEEEEeCCCceeeeeccCCCccchhHHHHHHH
Confidence 2211 2234678889999999999999999985432 22332 3666666655 699999886 2333444 677
Q ss_pred HHhhhc
Q 017731 317 LIKASE 322 (367)
Q Consensus 317 fl~~~~ 322 (367)
|+....
T Consensus 384 f~~~~~ 389 (409)
T KOG1838|consen 384 FLGNAI 389 (409)
T ss_pred HHHHHH
Confidence 776643
No 83
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.57 E-value=1.5e-13 Score=129.38 Aligned_cols=256 Identities=14% Similarity=0.106 Sum_probs=144.9
Q ss_pred CccccCCCcccccc-CCcEEEEEEec---CCCCeEEEEcCCCCCccch-----HHhHHhhcCCCCCCCCchhhhcccccC
Q 017731 9 GKEQSAAPDAALND-NGIKIFYRTYG---RGPTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVES 79 (367)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~ 79 (367)
|+.....|..++-. +-.++..+..- .-+.+||+++.+-.....+ +.+++.|.+
T Consensus 184 G~~~a~TPg~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~------------------ 245 (560)
T TIGR01839 184 GKNLATTEGAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK------------------ 245 (560)
T ss_pred CCCCCCCCCceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH------------------
Confidence 44444444444433 33444333221 1234699999988666656 578888887
Q ss_pred CCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHH----HHHhCCc-
Q 017731 80 GDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACK----LAAMVPE- 150 (367)
Q Consensus 80 ~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~----~a~~~p~- 150 (367)
+||+|+++|+++-+.+. ..++++++++.+.+.++.+ |.+++.++|||+||.++.. +++++++
T Consensus 246 ----qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~ 316 (560)
T TIGR01839 246 ----NQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLR 316 (560)
T ss_pred ----cCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCC
Confidence 79999999999876654 3568899998887777765 6789999999999999997 7888886
Q ss_pred ceeEEEEeccCCCCCCCCC---ccchhhHHHHHHH---hhccChhhhhh----cccCccccHHH--------------HH
Q 017731 151 RVLSLALLNVTGGGFQCCP---KLDLQTLSIAIRF---FRAKTPEKRAA----VDLDTHYSQEY--------------LE 206 (367)
Q Consensus 151 ~v~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~--------------~~ 206 (367)
+|++++++.+......... ..+...+...... ........... ........... +.
T Consensus 317 ~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll 396 (560)
T TIGR01839 317 KVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDIL 396 (560)
T ss_pred ceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHH
Confidence 7999999998754221100 0111111110000 00000000000 00000000000 11
Q ss_pred HHhCCCch-hhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHH
Q 017731 207 EYVGSSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAE 285 (367)
Q Consensus 207 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~ 285 (367)
.+...... ......++++.+........-.+ . .....-.+++|+||++++.|++|.++|++.+..+.+
T Consensus 397 ~Wn~D~t~lPg~~~~e~l~ly~~N~L~~pG~l----~-------v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~ 465 (560)
T TIGR01839 397 YWNNDTTRLPAAFHGDLLDMFKSNPLTRPDAL----E-------VCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSAL 465 (560)
T ss_pred HHhCcCccchHHHHHHHHHHHhcCCCCCCCCE----E-------ECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHH
Confidence 11111111 11122222221111111000000 0 001123478899999999999999999999999999
Q ss_pred HhcCCcEEEEcCCCCcc
Q 017731 286 KLYPVARMIDLPGGHLV 302 (367)
Q Consensus 286 ~~~~~~~~~~~~ggH~~ 302 (367)
.+....+++..++||..
T Consensus 466 l~gs~~~fvl~~gGHIg 482 (560)
T TIGR01839 466 LLGGKRRFVLSNSGHIQ 482 (560)
T ss_pred HcCCCeEEEecCCCccc
Confidence 88667788888889943
No 84
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.57 E-value=4e-14 Score=130.99 Aligned_cols=118 Identities=23% Similarity=0.391 Sum_probs=87.7
Q ss_pred EEEEEecCCCCeEEEEcCCCCCc--cchHH-hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC
Q 017731 27 IFYRTYGRGPTKVILITGLAGTH--DAWGP-QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV 103 (367)
Q Consensus 27 l~~~~~g~~~p~vv~lHG~~~~~--~~~~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~ 103 (367)
|.-.......|++|++||++.+. ..|.+ +.+.|... +..++|+++|++|+|.+..+.
T Consensus 32 i~~s~Fn~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~--------------------~~d~nVI~VDw~g~g~s~y~~ 91 (442)
T TIGR03230 32 IADCNFNHETKTFIVIHGWTVTGMFESWVPKLVAALYER--------------------EPSANVIVVDWLSRAQQHYPT 91 (442)
T ss_pred hhhcCcCCCCCeEEEECCCCcCCcchhhHHHHHHHHHhc--------------------cCCCEEEEEECCCcCCCCCcc
Confidence 33334445678899999998754 34654 55555420 026999999999999886553
Q ss_pred CCCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCC
Q 017731 104 KKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQ 166 (367)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~ 166 (367)
. ......+++++.++++.+ +.++++|+||||||.+|..++.++|++|.++++++|..+.+.
T Consensus 92 a--~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~F~ 158 (442)
T TIGR03230 92 S--AAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPTFE 158 (442)
T ss_pred c--cccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCccc
Confidence 2 223456667777777754 367999999999999999999999999999999999876554
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.56 E-value=1.4e-13 Score=117.78 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=71.8
Q ss_pred CCCCeEEEEcCCCCCccchH---HhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC------
Q 017731 34 RGPTKVILITGLAGTHDAWG---PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK------ 104 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~~~~---~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~------ 104 (367)
+..|+||++||.+++...+. .+...+.+ .||.|+++|.+|++.+.....
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~----------------------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~ 68 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADR----------------------YGFVLVAPEQTSYNSSNNCWDWFFTHH 68 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHh----------------------CCeEEEecCCcCccccCCCCCCCCccc
Confidence 35678999999998876654 23333333 599999999999875432110
Q ss_pred --CCCCCHHHHHHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 105 --KTEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 105 --~~~~~~~~~~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.......++.+.+..+.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++.
T Consensus 69 ~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 69 RARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred cCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 0001122222222233333333 58999999999999999999999999999998875
No 86
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.55 E-value=1.5e-13 Score=118.14 Aligned_cols=178 Identities=21% Similarity=0.150 Sum_probs=115.7
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCC-CCCCCCCCC--C---
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGR-SSVPVKKTE--Y--- 108 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~-S~~~~~~~~--~--- 108 (367)
+.|.||++|+..+-....+.+++.|++ +||.|+++|+-+-.. ......... .
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~----------------------~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAE----------------------EGYVVLAPDLFGGRGAPPSDPEEAFAAMREL 70 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHH----------------------TT-EEEEE-CCCCTS--CCCHHCHHHHHHHC
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHh----------------------cCCCEEecccccCCCCCccchhhHHHHHHHH
Confidence 346899999998877777888999998 799999999854333 111110000 0
Q ss_pred ---CHHHHHHHHHHHHHHh---C---CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHH
Q 017731 109 ---TTKIMAKDVIALMDHL---G---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIA 179 (367)
Q Consensus 109 ---~~~~~~~dl~~~l~~~---~---~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 179 (367)
..+...+++.+.++.+ . .+++.++|+|+||.+++.++.+. +.+++.|..-|...
T Consensus 71 ~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~---------------- 133 (218)
T PF01738_consen 71 FAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP---------------- 133 (218)
T ss_dssp HHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS----------------
T ss_pred HhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC----------------
Confidence 1244556665556554 2 35899999999999999999887 57899988776100
Q ss_pred HHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHh
Q 017731 180 IRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRS 259 (367)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (367)
..........
T Consensus 134 ----------------------------------------------------------------------~~~~~~~~~~ 143 (218)
T PF01738_consen 134 ----------------------------------------------------------------------PPPPLEDAPK 143 (218)
T ss_dssp ----------------------------------------------------------------------GGGHHHHGGG
T ss_pred ----------------------------------------------------------------------CCcchhhhcc
Confidence 0011234566
Q ss_pred cCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCcccccC--------hHHHHHHHHHHHhhh
Q 017731 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHER--------TEEVNQALIDLIKAS 321 (367)
Q Consensus 260 i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~e~--------p~~~~~~i~~fl~~~ 321 (367)
+++|+++++|++|+.++.+..+.+.+.+ ....++++++| +|.+.... .++-.+.+.+||++.
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999887777776 45789999998 99776542 234556777787763
No 87
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.55 E-value=3.9e-13 Score=131.05 Aligned_cols=118 Identities=17% Similarity=0.122 Sum_probs=89.1
Q ss_pred ccCCcEEEEEEec----CCCCeEEEEcCCCCCcc---ch-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 21 NDNGIKIFYRTYG----RGPTKVILITGLAGTHD---AW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 21 ~~~g~~l~~~~~g----~~~p~vv~lHG~~~~~~---~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
..||.+|++..+- ...|+||++||++.+.. .+ ......|.+ +||.|+++|
T Consensus 3 ~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~----------------------~Gy~vv~~D 60 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA----------------------QGYAVVIQD 60 (550)
T ss_pred CCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHh----------------------CCcEEEEEe
Confidence 4578899866552 24478999999987653 12 223455655 699999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 93 NRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 93 ~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~-----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
+||+|.|..... .++ ...++|+.++++.+.. .++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 61 ~RG~g~S~g~~~--~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 61 TRGRGASEGEFD--LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred ccccccCCCceE--ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 999999986542 222 4567777777776532 4899999999999999999999999999999887643
No 88
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.55 E-value=2e-14 Score=127.24 Aligned_cols=119 Identities=16% Similarity=0.275 Sum_probs=87.5
Q ss_pred CCcEEEEEEecCCCCeEEEEcCCCCCc-cchHHh-HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC
Q 017731 23 NGIKIFYRTYGRGPTKVILITGLAGTH-DAWGPQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (367)
Q Consensus 23 ~g~~l~~~~~g~~~p~vv~lHG~~~~~-~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (367)
++..+.+.....++|++|++||++++. ..|... .+.+... .+++|+++|+++++.+.
T Consensus 23 ~~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~---------------------~~~nVi~vD~~~~~~~~ 81 (275)
T cd00707 23 DPSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSR---------------------GDYNVIVVDWGRGANPN 81 (275)
T ss_pred ChhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhc---------------------CCCEEEEEECccccccC
Confidence 456677777778888999999999987 566543 4444321 38999999999884332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCC
Q 017731 101 VPVKKTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (367)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (367)
.+. ...+.....+++.++++.+ +.++++++||||||.++..++.++|++|.++++++|..+.
T Consensus 82 y~~--a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 82 YPQ--AVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred hHH--HHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 211 1234455556666665543 4468999999999999999999999999999999988543
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.54 E-value=1.6e-13 Score=124.47 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=113.8
Q ss_pred CCeEEEEcCCCCCccchHHh-HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 36 PTKVILITGLAGTHDAWGPQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.|+||++.|+-+..+.+..+ .+.|.. +|+.++++|.||.|.|....- ..+.+.+.
T Consensus 190 ~P~VIv~gGlDs~qeD~~~l~~~~l~~----------------------rGiA~LtvDmPG~G~s~~~~l--~~D~~~l~ 245 (411)
T PF06500_consen 190 YPTVIVCGGLDSLQEDLYRLFRDYLAP----------------------RGIAMLTVDMPGQGESPKWPL--TQDSSRLH 245 (411)
T ss_dssp EEEEEEE--TTS-GGGGHHHHHCCCHH----------------------CT-EEEEE--TTSGGGTTT-S---S-CCHHH
T ss_pred CCEEEEeCCcchhHHHHHHHHHHHHHh----------------------CCCEEEEEccCCCcccccCCC--CcCHHHHH
Confidence 36788888887777665544 466776 699999999999999865432 22334455
Q ss_pred HHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhh
Q 017731 115 KDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKR 191 (367)
Q Consensus 115 ~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (367)
..+...+... +..+|.++|.|+||.+|.++|..+++|++++|.++++...+- ... .... ..+.
T Consensus 246 ~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~f----------t~~-~~~~-~~P~-- 311 (411)
T PF06500_consen 246 QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFF----------TDP-EWQQ-RVPD-- 311 (411)
T ss_dssp HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGG----------H-H-HHHT-TS-H--
T ss_pred HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhh----------ccH-HHHh-cCCH--
Confidence 5565555554 335899999999999999999999899999999998632110 000 0000 0111
Q ss_pred hhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHh--HhcCccEEEEee
Q 017731 192 AAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI--RSAGFLVSVIHG 269 (367)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvlii~G 269 (367)
.+. ..+...++............+..++ + .....+ .+..+|+|.+.|
T Consensus 312 -------my~-d~LA~rlG~~~~~~~~l~~el~~~S---------------------L--k~qGlL~~rr~~~plL~i~~ 360 (411)
T PF06500_consen 312 -------MYL-DVLASRLGMAAVSDESLRGELNKFS---------------------L--KTQGLLSGRRCPTPLLAING 360 (411)
T ss_dssp -------HHH-HHHHHHCT-SCE-HHHHHHHGGGGS---------------------T--TTTTTTTSS-BSS-EEEEEE
T ss_pred -------HHH-HHHHHHhCCccCCHHHHHHHHHhcC---------------------c--chhccccCCCCCcceEEeec
Confidence 011 1112222211111111111111110 0 000112 566789999999
Q ss_pred cCCccCcHHHHHHHHHHhcCCcEEEEcCC-C-CcccccChHHHHHHHHHHHhh
Q 017731 270 RHDVIAQICYARRLAEKLYPVARMIDLPG-G-HLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 270 ~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-g-H~~~~e~p~~~~~~i~~fl~~ 320 (367)
++|+++|.+..+-++.. ..+.+...++. . |..+ +.-...+.+||++
T Consensus 361 ~~D~v~P~eD~~lia~~-s~~gk~~~~~~~~~~~gy----~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 361 EDDPVSPIEDSRLIAES-STDGKALRIPSKPLHMGY----PQALDEIYKWLED 408 (411)
T ss_dssp TT-SSS-HHHHHHHHHT-BTT-EEEEE-SSSHHHHH----HHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHhc-CCCCceeecCCCccccch----HHHHHHHHHHHHH
Confidence 99999999999988886 46677777775 4 4433 3455566667665
No 90
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.52 E-value=1.6e-12 Score=117.05 Aligned_cols=207 Identities=20% Similarity=0.193 Sum_probs=113.8
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC------------
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK------------ 104 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~------------ 104 (367)
|.||.+||.++....|...+..-.. ||.|+.+|.||+|.......
T Consensus 84 Pavv~~hGyg~~~~~~~~~~~~a~~-----------------------G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~ 140 (320)
T PF05448_consen 84 PAVVQFHGYGGRSGDPFDLLPWAAA-----------------------GYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT 140 (320)
T ss_dssp EEEEEE--TT--GGGHHHHHHHHHT-----------------------T-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT
T ss_pred CEEEEecCCCCCCCCcccccccccC-----------------------CeEEEEecCCCCCCCCCCccccCCCCCccHHh
Confidence 6799999999998777666655444 99999999999993221110
Q ss_pred ------CCCCCHHHHHHHHHHHHHHh------CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccc
Q 017731 105 ------KTEYTTKIMAKDVIALMDHL------GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (367)
Q Consensus 105 ------~~~~~~~~~~~dl~~~l~~~------~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (367)
...+-+..+..|....++.+ +.+++.+.|.|+||.+++.+|+..| +|++++...|....+.
T Consensus 141 ~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~------ 213 (320)
T PF05448_consen 141 RGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFR------ 213 (320)
T ss_dssp TTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHH------
T ss_pred cCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchh------
Confidence 01111233445555555543 3368999999999999999999886 6999998887531110
Q ss_pred hhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhC---CCch-hhHhHHHHHHhhhhcCccccccccchhhhhhccc
Q 017731 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVG---SSTR-RAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (367)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (367)
+.+.. ... ......+..++. .... .....+. +.
T Consensus 214 --------~~~~~---------~~~-~~~y~~~~~~~~~~d~~~~~~~~v~~~-L~------------------------ 250 (320)
T PF05448_consen 214 --------RALEL---------RAD-EGPYPEIRRYFRWRDPHHEREPEVFET-LS------------------------ 250 (320)
T ss_dssp --------HHHHH---------T---STTTHHHHHHHHHHSCTHCHHHHHHHH-HH------------------------
T ss_pred --------hhhhc---------CCc-cccHHHHHHHHhccCCCcccHHHHHHH-Hh------------------------
Confidence 00000 000 000011111111 1111 1111111 11
Q ss_pred cChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 249 MTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 249 ~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
..+.....+.++||+++-.|-.|.++||...-...+.+....++.+++. ||....+ .-.+...+||.+
T Consensus 251 -Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~---~~~~~~~~~l~~ 319 (320)
T PF05448_consen 251 -YFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE---FQEDKQLNFLKE 319 (320)
T ss_dssp -TT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH---HHHHHHHHHHHH
T ss_pred -hhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh---HHHHHHHHHHhc
Confidence 1233455678899999999999999999999999998866789999997 8855433 225666677664
No 91
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.52 E-value=9.9e-13 Score=107.51 Aligned_cols=155 Identities=23% Similarity=0.303 Sum_probs=102.2
Q ss_pred EEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 39 VILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 39 vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
|+++||++++. ..|.++.+.-.+ ..++|-..|+ + .-+.+++.+.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~----------------------~~~~V~~~~~------~------~P~~~~W~~~l 46 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE----------------------NSVRVEQPDW------D------NPDLDEWVQAL 46 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT----------------------TSEEEEEC--------T------S--HHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC----------------------CCeEEecccc------C------CCCHHHHHHHH
Confidence 68999999876 567776654444 2477777776 1 22678888888
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHH-HhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhccc
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLA-AMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDL 196 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (367)
.+.+.... +++++||||+||..+++++ .....+|.+++|++|.... .. ........
T Consensus 47 ~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-------~~-----------~~~~~~~~---- 103 (171)
T PF06821_consen 47 DQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-------DP-----------EPFPPELD---- 103 (171)
T ss_dssp HHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-------CH-----------HCCTCGGC----
T ss_pred HHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-------cc-----------cchhhhcc----
Confidence 88888765 5699999999999999999 6777899999999986310 00 00000000
Q ss_pred CccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCc
Q 017731 197 DTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQ 276 (367)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p 276 (367)
. .... ....+.+|.++|.+++|+++|
T Consensus 104 ---------------------------------------~------------f~~~---p~~~l~~~~~viaS~nDp~vp 129 (171)
T PF06821_consen 104 ---------------------------------------G------------FTPL---PRDPLPFPSIVIASDNDPYVP 129 (171)
T ss_dssp ---------------------------------------C------------CTTS---HCCHHHCCEEEEEETTBSSS-
T ss_pred ---------------------------------------c------------cccC---cccccCCCeEEEEcCCCCccC
Confidence 0 0000 011223677999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEcCC-CCcccccC
Q 017731 277 ICYARRLAEKLYPVARMIDLPG-GHLVSHER 306 (367)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~ 306 (367)
.+.++++++.+ +++++.+++ ||+.-.+.
T Consensus 130 ~~~a~~~A~~l--~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 130 FERAQRLAQRL--GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHHHHHHHHHH--T-EEEEETS-TTSSGGGT
T ss_pred HHHHHHHHHHc--CCCeEECCCCCCcccccC
Confidence 99999999998 889999997 99887653
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.51 E-value=1.1e-12 Score=120.33 Aligned_cols=258 Identities=12% Similarity=0.097 Sum_probs=144.7
Q ss_pred CeEEEEcCCCCCccch-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 37 TKVILITGLAGTHDAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
|+||++..+.+..... +.+++.|.. |+.|+..|+..-+...... ..++++++++
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-----------------------g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~ 157 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-----------------------DHDVYITDWVNARMVPLSA--GKFDLEDYID 157 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-----------------------CCcEEEEeCCCCCCCchhc--CCCCHHHHHH
Confidence 5799999888655433 567777776 9999999998766543222 4779999999
Q ss_pred HHHHHHHHhCCceEEEEEeChhHHHHHHHHHhC-----CcceeEEEEeccCCCCCCCCCccchhh----HHHHHHHhhcc
Q 017731 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTGGGFQCCPKLDLQT----LSIAIRFFRAK 186 (367)
Q Consensus 116 dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 186 (367)
.+.++++++|.+ ++++|+|+||..++.+++.. |++++++++++++.........+.... +....+.....
T Consensus 158 ~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~ 236 (406)
T TIGR01849 158 YLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMR 236 (406)
T ss_pred HHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhc
Confidence 999999999877 99999999999988776654 667999999998754322111111110 11111111000
Q ss_pred ------------Chhhhhhc-----ccCcc--ccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhcc
Q 017731 187 ------------TPEKRAAV-----DLDTH--YSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (367)
Q Consensus 187 ------------~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
.+...... ..... ...+++..+.............+.+.+.........-+...+...+..
T Consensus 237 vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~ 316 (406)
T TIGR01849 237 VPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQ 316 (406)
T ss_pred cCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHh
Confidence 11000000 00000 001111122111111111111111111111100001111111111111
Q ss_pred cc-C------hHHHHHhHhcC-ccEEEEeecCCccCcHHHHHHHHHHh---cC-CcEEEEc-CCCCccccc---ChHHHH
Q 017731 248 KM-T------QKDIQTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKL---YP-VARMIDL-PGGHLVSHE---RTEEVN 311 (367)
Q Consensus 248 ~~-~------~~~~~~l~~i~-~Pvlii~G~~D~~~p~~~~~~~~~~~---~~-~~~~~~~-~ggH~~~~e---~p~~~~ 311 (367)
+. . ....-.+++|+ +|++.+.|++|.++|+..++.+.+.+ ++ ..+.+.. ++||...+. -.+++.
T Consensus 317 n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~ 396 (406)
T TIGR01849 317 FLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIY 396 (406)
T ss_pred CCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhc
Confidence 11 0 01112467888 99999999999999999999998864 22 3445666 459976654 457888
Q ss_pred HHHHHHHhh
Q 017731 312 QALIDLIKA 320 (367)
Q Consensus 312 ~~i~~fl~~ 320 (367)
-.|.+||.+
T Consensus 397 P~i~~wl~~ 405 (406)
T TIGR01849 397 PLVREFIRR 405 (406)
T ss_pred hHHHHHHHh
Confidence 999999975
No 93
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.49 E-value=1e-12 Score=128.99 Aligned_cols=111 Identities=23% Similarity=0.251 Sum_probs=90.3
Q ss_pred CCccccccCCcEEEEEEecCCC----------CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCC
Q 017731 15 APDAALNDNGIKIFYRTYGRGP----------TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA 84 (367)
Q Consensus 15 ~~~~~~~~~g~~l~~~~~g~~~----------p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (367)
.|..+...++.++.|...+.+. |+||++||++++...|..+.+.|.+ +
T Consensus 418 vp~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~----------------------~ 475 (792)
T TIGR03502 418 VPVLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA----------------------A 475 (792)
T ss_pred cceEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh----------------------C
Confidence 4556777888888887765442 4799999999999999999999986 5
Q ss_pred CeEEEeeCCCCCCCCCCC---------CC-CC-----------CCCHHHHHHHHHHHHHHhC----------------Cc
Q 017731 85 GIEVCAFDNRGMGRSSVP---------VK-KT-----------EYTTKIMAKDVIALMDHLG----------------WK 127 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~---------~~-~~-----------~~~~~~~~~dl~~~l~~~~----------------~~ 127 (367)
||+|+++|+||||.|... .. .. ..++.+.+.|+..+...++ ..
T Consensus 476 Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~ 555 (792)
T TIGR03502 476 GVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS 555 (792)
T ss_pred CcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 999999999999999543 11 01 1278999999998888776 24
Q ss_pred eEEEEEeChhHHHHHHHHHh
Q 017731 128 QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 128 ~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+++++||||||.++..++..
T Consensus 556 ~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 556 KVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cEEEEecCHHHHHHHHHHHh
Confidence 89999999999999999975
No 94
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.48 E-value=4.2e-12 Score=111.81 Aligned_cols=110 Identities=21% Similarity=0.239 Sum_probs=92.1
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC----CCCCCCHH
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV----KKTEYTTK 111 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~----~~~~~~~~ 111 (367)
++.+++++|.+|-.+.|..++..|.+.+ ...+.|+++.+.||-.++... ....++++
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l-------------------~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~ 62 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKL-------------------NPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQ 62 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhC-------------------CCCCeeEEecCCCCcCCcccccccCCCCccCHH
Confidence 3579999999999999999999998631 148999999999998877651 24688999
Q ss_pred HHHHHHHHHHHHhC------CceEEEEEeChhHHHHHHHHHhCC---cceeEEEEeccCCCC
Q 017731 112 IMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTGGG 164 (367)
Q Consensus 112 ~~~~dl~~~l~~~~------~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~ 164 (367)
++++...++++.+- ..+++++|||.||+++++++.+.+ .+|.+++++-|+...
T Consensus 63 ~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 63 DQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 99998888887652 347999999999999999999999 789999999987543
No 95
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.47 E-value=2.3e-12 Score=103.05 Aligned_cols=172 Identities=19% Similarity=0.228 Sum_probs=117.9
Q ss_pred CCCCeEEEEcCCCC-----CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCC
Q 017731 34 RGPTKVILITGLAG-----THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEY 108 (367)
Q Consensus 34 ~~~p~vv~lHG~~~-----~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~ 108 (367)
+..|..|++|..+. +...-..+...|.+ .||.++.+|+||.|+|...-+. ..
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----------------------~G~atlRfNfRgVG~S~G~fD~-Gi 82 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVK----------------------RGFATLRFNFRGVGRSQGEFDN-GI 82 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHh----------------------CCceEEeecccccccccCcccC-Cc
Confidence 34567888886432 22334456666766 7999999999999999877642 22
Q ss_pred CHHHHHHHHHHHHHHhCCc-e-EEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhcc
Q 017731 109 TTKIMAKDVIALMDHLGWK-Q-AHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (367)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~-~-v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (367)
.-.+-+....++++....+ + ..+.|+|+|++++..+|.+.|+ ....+.+.+...
T Consensus 83 GE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~----------------------- 138 (210)
T COG2945 83 GELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN----------------------- 138 (210)
T ss_pred chHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC-----------------------
Confidence 2222233334444444332 3 4688999999999999999876 445555554310
Q ss_pred ChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEE
Q 017731 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (367)
......+....+|.++
T Consensus 139 ----------------------------------------------------------------~~dfs~l~P~P~~~lv 154 (210)
T COG2945 139 ----------------------------------------------------------------AYDFSFLAPCPSPGLV 154 (210)
T ss_pred ----------------------------------------------------------------chhhhhccCCCCCcee
Confidence 0001123444579999
Q ss_pred EeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHh
Q 017731 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 267 i~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~ 319 (367)
|+|+.|.+++.....++++. ...+++.+++ +||++ .+-+.+.+.|.+||.
T Consensus 155 i~g~~Ddvv~l~~~l~~~~~--~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 155 IQGDADDVVDLVAVLKWQES--IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred EecChhhhhcHHHHHHhhcC--CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 99999999999888888885 4667888888 89876 556788999999985
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.45 E-value=5.3e-12 Score=108.98 Aligned_cols=178 Identities=22% Similarity=0.167 Sum_probs=131.8
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC-CCCCCCCC-C----C--
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-GRSSVPVK-K----T-- 106 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-G~S~~~~~-~----~-- 106 (367)
+.|.||++|+..+-....+.+.+.|+. .||.|+++|+-+. |.+..... . .
T Consensus 26 ~~P~VIv~hei~Gl~~~i~~~a~rlA~----------------------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~ 83 (236)
T COG0412 26 GFPGVIVLHEIFGLNPHIRDVARRLAK----------------------AGYVVLAPDLYGRQGDPTDIEDEPAELETGL 83 (236)
T ss_pred CCCEEEEEecccCCchHHHHHHHHHHh----------------------CCcEEEechhhccCCCCCcccccHHHHhhhh
Confidence 337899999999988899999999999 7999999998763 33322210 0 0
Q ss_pred --CCCHHHHHHHHHHHHHHhC------CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHH
Q 017731 107 --EYTTKIMAKDVIALMDHLG------WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (367)
Q Consensus 107 --~~~~~~~~~dl~~~l~~~~------~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (367)
..+..+...|+.+.++.+. .++|.++|+||||.+++.++.+.| .+++.+..-+......
T Consensus 84 ~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~------------ 150 (236)
T COG0412 84 VERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD------------ 150 (236)
T ss_pred hccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc------------
Confidence 1234677788887777662 457999999999999999999887 7999998887631100
Q ss_pred HHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhH
Q 017731 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (367)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (367)
.....
T Consensus 151 ---------------------------------------------------------------------------~~~~~ 155 (236)
T COG0412 151 ---------------------------------------------------------------------------TADAP 155 (236)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 01124
Q ss_pred hcCccEEEEeecCCccCcHHHHHHHHHHhcC---CcEEEEcCC-CCcccccC-----------hHHHHHHHHHHHhhhc
Q 017731 259 SAGFLVSVIHGRHDVIAQICYARRLAEKLYP---VARMIDLPG-GHLVSHER-----------TEEVNQALIDLIKASE 322 (367)
Q Consensus 259 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~e~-----------p~~~~~~i~~fl~~~~ 322 (367)
++++|+|++.|+.|..+|....+.+.+.+.. ..++.++++ .|.++-+. .+.-.+.+.+|+++..
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 6679999999999999999988888877732 477889998 79777432 2445677777887653
No 97
>PRK10162 acetyl esterase; Provisional
Probab=99.45 E-value=1.1e-11 Score=112.51 Aligned_cols=102 Identities=19% Similarity=0.169 Sum_probs=72.5
Q ss_pred CCCeEEEEcCCC---CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHH
Q 017731 35 GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (367)
Q Consensus 35 ~~p~vv~lHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (367)
+.|+||++||.| ++...|..+...|+.. .|+.|+++|+|.......+ ...+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~Vv~vdYrlape~~~p-----~~~~ 133 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASY---------------------SGCTVIGIDYTLSPEARFP-----QAIE 133 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHH---------------------cCCEEEEecCCCCCCCCCC-----CcHH
Confidence 457899999977 5556788888888762 3899999999965443222 1334
Q ss_pred HHH---HHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhC------CcceeEEEEeccCC
Q 017731 112 IMA---KDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTG 162 (367)
Q Consensus 112 ~~~---~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~ 162 (367)
+.. +.+.+..+.+++ ++++|+|+|+||.+++.++.+. +.++.+++++.|..
T Consensus 134 D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 134 EIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 333 333333445554 5899999999999999998753 35789999998753
No 98
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.42 E-value=1e-11 Score=108.82 Aligned_cols=131 Identities=24% Similarity=0.364 Sum_probs=108.4
Q ss_pred CccccccCCcEEEEEEecCC-----C--CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 16 PDAALNDNGIKIFYRTYGRG-----P--TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 16 ~~~~~~~~g~~l~~~~~g~~-----~--p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
+.-.+++.|.+||+...... + -+++++|||+++-..|..+++-|.+.-+...++. --|+|
T Consensus 125 ~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d-------------~~FEV 191 (469)
T KOG2565|consen 125 KQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESD-------------YAFEV 191 (469)
T ss_pred hhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccc-------------eeEEE
Confidence 44456788999999876521 1 2699999999999999999999987422221100 24899
Q ss_pred EeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEecc
Q 017731 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (367)
|++.+||+|.|+.+.. ..++..+.+..+..++-++|.+++.+-|..||+.++..+|..+|++|.|+-+-.+
T Consensus 192 I~PSlPGygwSd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 192 IAPSLPGYGWSDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred eccCCCCcccCcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 9999999999998886 6888999999999999999999999999999999999999999999998876544
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.41 E-value=1.8e-11 Score=103.03 Aligned_cols=226 Identities=17% Similarity=0.142 Sum_probs=139.1
Q ss_pred cccccCCcEEEEEEe----cC-CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 18 AALNDNGIKIFYRTY----GR-GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~----g~-~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
.+...+|.+|.-+.. ++ .-|.||-.||++++...|..++..-.. ||.|+.+|
T Consensus 60 Tf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~-----------------------Gyavf~Md 116 (321)
T COG3458 60 TFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVA-----------------------GYAVFVMD 116 (321)
T ss_pred EEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccccccc-----------------------ceeEEEEe
Confidence 344556666664322 22 236899999999999989888776665 99999999
Q ss_pred CCCCCCCCCC----CCC---------------CCCCHHHHHHHHHHHHH------HhCCceEEEEEeChhHHHHHHHHHh
Q 017731 93 NRGMGRSSVP----VKK---------------TEYTTKIMAKDVIALMD------HLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 93 ~~G~G~S~~~----~~~---------------~~~~~~~~~~dl~~~l~------~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
.||.|.|... ... ..|-......|+..+++ ..+.+++.+.|.|.||.+++.+++.
T Consensus 117 vRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal 196 (321)
T COG3458 117 VRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL 196 (321)
T ss_pred cccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc
Confidence 9999988431 110 11112223333333333 3355789999999999999999988
Q ss_pred CCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCch-hhHhHHHHHHhh
Q 017731 148 VPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTR-RAILYQEYVKGI 226 (367)
Q Consensus 148 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 226 (367)
.| +++++++.-|....+.....+. ..-....+..++..... .....+. +.
T Consensus 197 ~~-rik~~~~~~Pfl~df~r~i~~~-------------------------~~~~ydei~~y~k~h~~~e~~v~~T-L~-- 247 (321)
T COG3458 197 DP-RIKAVVADYPFLSDFPRAIELA-------------------------TEGPYDEIQTYFKRHDPKEAEVFET-LS-- 247 (321)
T ss_pred Ch-hhhcccccccccccchhheeec-------------------------ccCcHHHHHHHHHhcCchHHHHHHH-Hh--
Confidence 76 7999998887643322111110 00011111122111111 1111110 00
Q ss_pred hhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCccccc
Q 017731 227 SATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE 305 (367)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e 305 (367)
..+......++++|+|+..|-.|+++||...-...+.+....++.+++- +|.-.
T Consensus 248 -----------------------yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~-- 302 (321)
T COG3458 248 -----------------------YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG-- 302 (321)
T ss_pred -----------------------hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC--
Confidence 0122344567899999999999999999999999999866778888886 87543
Q ss_pred ChHHHHHHHHHHHhhh
Q 017731 306 RTEEVNQALIDLIKAS 321 (367)
Q Consensus 306 ~p~~~~~~i~~fl~~~ 321 (367)
|.-..+.+..|++..
T Consensus 303 -p~~~~~~~~~~l~~l 317 (321)
T COG3458 303 -PGFQSRQQVHFLKIL 317 (321)
T ss_pred -cchhHHHHHHHHHhh
Confidence 333444455666543
No 100
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.39 E-value=1.8e-11 Score=106.81 Aligned_cols=108 Identities=17% Similarity=0.229 Sum_probs=67.5
Q ss_pred cEEEEEEecC-CCCeEEEEcCCCCCc---cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC----CC
Q 017731 25 IKIFYRTYGR-GPTKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR----GM 96 (367)
Q Consensus 25 ~~l~~~~~g~-~~p~vv~lHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~----G~ 96 (367)
..+.|...+. .+..||||.|++..- .....+++.|.+ .+|.|+-+-++ |+
T Consensus 21 ~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~----------------------~~wsl~q~~LsSSy~G~ 78 (303)
T PF08538_consen 21 VAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEE----------------------TGWSLFQVQLSSSYSGW 78 (303)
T ss_dssp EEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-----------------------TT-EEEEE--GGGBTTS
T ss_pred eEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhcc----------------------CCeEEEEEEecCccCCc
Confidence 3344444443 334799999998754 345677788876 59999999765 45
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh--------CCceEEEEEeChhHHHHHHHHHhCC-----cceeEEEEeccCCC
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL--------GWKQAHVFGHSMGAMIACKLAAMVP-----ERVLSLALLNVTGG 163 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~--------~~~~v~lvGhS~Gg~~a~~~a~~~p-----~~v~~lvl~~~~~~ 163 (367)
|.+ ++++-++||.++++.+ +.++|+|+|||.|+.-+++|+.... ..|+++||-+|...
T Consensus 79 G~~---------SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 79 GTS---------SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp -S-----------HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred Ccc---------hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 544 6777788887777654 3468999999999999999998652 57999999999764
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.38 E-value=2.3e-11 Score=111.35 Aligned_cols=129 Identities=22% Similarity=0.276 Sum_probs=94.3
Q ss_pred cccccCCcEEEEEEec---CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 18 AALNDNGIKIFYRTYG---RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g---~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
.+.+.||.-+...... ..+|+|++.||+..++..|.... +.++++-.|+++||.|+.-+.|
T Consensus 52 ~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~----------------p~~sLaf~LadaGYDVWLgN~R 115 (403)
T KOG2624|consen 52 EVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNG----------------PEQSLAFLLADAGYDVWLGNNR 115 (403)
T ss_pred EEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecC----------------ccccHHHHHHHcCCceeeecCc
Confidence 4556688765544432 45678999999999998884321 1234455555589999999999
Q ss_pred CCCCCCCCC--------CCCCCCHHHHHH-HHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCc---ceeEEEEe
Q 017731 95 GMGRSSVPV--------KKTEYTTKIMAK-DVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE---RVLSLALL 158 (367)
Q Consensus 95 G~G~S~~~~--------~~~~~~~~~~~~-dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~ 158 (367)
|.-.|.... ..+.+++++++. ||-+.++.. +.++++.+|||.|+.+.+.++...|+ +|+.++++
T Consensus 116 Gn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aL 195 (403)
T KOG2624|consen 116 GNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIAL 195 (403)
T ss_pred CcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeee
Confidence 977665321 134567777664 666655544 67899999999999999999988875 79999999
Q ss_pred ccCC
Q 017731 159 NVTG 162 (367)
Q Consensus 159 ~~~~ 162 (367)
+|..
T Consensus 196 AP~~ 199 (403)
T KOG2624|consen 196 APAA 199 (403)
T ss_pred cchh
Confidence 9975
No 102
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.33 E-value=2.9e-11 Score=99.48 Aligned_cols=254 Identities=17% Similarity=0.180 Sum_probs=143.9
Q ss_pred cccccCCcEEEEEEecCC---CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 18 AALNDNGIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
..-..||..+....+... +..+++-.+.+.....|++++..+++ +||+|+++|+|
T Consensus 9 ~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~----------------------~Gf~Vlt~dyR 66 (281)
T COG4757 9 HLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAK----------------------AGFEVLTFDYR 66 (281)
T ss_pred ccccCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhc----------------------cCceEEEEecc
Confidence 344558888877666532 22466666777777888999999998 79999999999
Q ss_pred CCCCCCCCCC-CCCCCHHHHHH-HHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCC
Q 017731 95 GMGRSSVPVK-KTEYTTKIMAK-DVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCC 168 (367)
Q Consensus 95 G~G~S~~~~~-~~~~~~~~~~~-dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~ 168 (367)
|.|.|+.... ...+.+.|++. |+.+.++.+ ...+.+.||||+||.+.-.+.. ++ ++.+....+... ++.
T Consensus 67 G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~ga-gws-- 141 (281)
T COG4757 67 GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSGA-GWS-- 141 (281)
T ss_pred cccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc-ccceeeEecccc-ccc--
Confidence 9999986553 23456666664 555555544 4458999999999987665544 44 454444444331 111
Q ss_pred CccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCC-chhhHhHHHHHHhhhhcCccccccccchhhhhhcc
Q 017731 169 PKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSS-TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMH 247 (367)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (367)
++ .............. .....-.......-..+++.. ......++++.+..... ++-+..
T Consensus 142 g~---m~~~~~l~~~~l~~----lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p----~y~fdd-------- 202 (281)
T COG4757 142 GW---MGLRERLGAVLLWN----LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHP----RYYFDD-------- 202 (281)
T ss_pred cc---hhhhhcccceeecc----ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCc----cccccC--------
Confidence 00 00000000000000 000000001111111222211 11222333333322211 011100
Q ss_pred ccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcE--EEEcC---C--CCcccccCh-HHHHHHHHHHH
Q 017731 248 KMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVAR--MIDLP---G--GHLVSHERT-EEVNQALIDLI 318 (367)
Q Consensus 248 ~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~--~~~~~---g--gH~~~~e~p-~~~~~~i~~fl 318 (367)
.......+..+.+++|+.++...+|+.+|+...+.+.+.. +++. .+.++ + ||+-..-++ |...+.+.+|+
T Consensus 203 p~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y-~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 203 PAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFY-RNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhh-hcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 0111234566788999999999999999999999999875 5554 44443 3 899888776 77777777765
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.33 E-value=5.9e-12 Score=88.74 Aligned_cols=76 Identities=25% Similarity=0.401 Sum_probs=64.9
Q ss_pred CcEEEEEEecCC---CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC
Q 017731 24 GIKIFYRTYGRG---PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (367)
Q Consensus 24 g~~l~~~~~g~~---~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (367)
|.+|+++.+.+. +.+|+++||++.++..|..+++.|++ +||.|+++|+||||.|+
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~----------------------~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAE----------------------QGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHh----------------------CCCEEEEECCCcCCCCC
Confidence 578899888643 44899999999999999999999999 79999999999999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH
Q 017731 101 VPVKKTEYTTKIMAKDVIALMD 122 (367)
Q Consensus 101 ~~~~~~~~~~~~~~~dl~~~l~ 122 (367)
.... ..-+++++++|+..+++
T Consensus 59 g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 59 GKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred Cccc-ccCCHHHHHHHHHHHhC
Confidence 6443 34589999999998864
No 104
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.31 E-value=3.3e-11 Score=98.85 Aligned_cols=191 Identities=19% Similarity=0.138 Sum_probs=124.4
Q ss_pred cccccCCcEEEEEEecCCCCeEEEEcCC-CCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC-C
Q 017731 18 AALNDNGIKIFYRTYGRGPTKVILITGL-AGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-G 95 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~~~p~vv~lHG~-~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~-G 95 (367)
+..++.|..-+..-..+++..||++--. |.....-+..++.++. +||.|+.+|+- |
T Consensus 21 ~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~----------------------~Gy~v~vPD~~~G 78 (242)
T KOG3043|consen 21 REEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVAL----------------------NGYTVLVPDFFRG 78 (242)
T ss_pred ceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhc----------------------CCcEEEcchhhcC
Confidence 3444555544443333333345555544 4444446777888887 69999999974 3
Q ss_pred CCCCCCCCC------CCCCCHHHHHHHHHHHHHHh---C-CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 96 MGRSSVPVK------KTEYTTKIMAKDVIALMDHL---G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 96 ~G~S~~~~~------~~~~~~~~~~~dl~~~l~~~---~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
--.+..... ....+.....+++..+++.+ | .++|-++|+||||.++..+....| .+.+.+.+-|+.
T Consensus 79 dp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~--- 154 (242)
T KOG3043|consen 79 DPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF--- 154 (242)
T ss_pred CCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc---
Confidence 111211000 01234444445555555444 4 568999999999999999988887 688888887752
Q ss_pred CCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhh
Q 017731 166 QCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACW 245 (367)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (367)
T Consensus 155 -------------------------------------------------------------------------------- 154 (242)
T KOG3043|consen 155 -------------------------------------------------------------------------------- 154 (242)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCC----cEEEEcCC-CCcccc-----cCh------HH
Q 017731 246 MHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV----ARMIDLPG-GHLVSH-----ERT------EE 309 (367)
Q Consensus 246 ~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~----~~~~~~~g-gH~~~~-----e~p------~~ 309 (367)
.....+..+++||+++.|+.|.++|++....+.+.+..+ .++++++| +|-... ..| |+
T Consensus 155 ------~d~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~ee 228 (242)
T KOG3043|consen 155 ------VDSADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEE 228 (242)
T ss_pred ------CChhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHH
Confidence 012446777899999999999999999998888887332 36899999 996663 233 44
Q ss_pred HHHHHHHHHhh
Q 017731 310 VNQALIDLIKA 320 (367)
Q Consensus 310 ~~~~i~~fl~~ 320 (367)
..+.+.+|++.
T Consensus 229 a~~~~~~Wf~~ 239 (242)
T KOG3043|consen 229 AYQRFISWFKH 239 (242)
T ss_pred HHHHHHHHHHH
Confidence 55666667664
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.29 E-value=4.8e-10 Score=92.70 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=66.6
Q ss_pred EEEEcCCCCCccchHH--hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 39 VILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 39 vv~lHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
|+++||+.++...... +.+.+.+.. ....++++|++ ...++..+.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~--------------------~~~~~~~p~l~-------------~~p~~a~~~ 48 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHG--------------------PDIQYPCPDLP-------------PFPEEAIAQ 48 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhC--------------------CCceEECCCCC-------------cCHHHHHHH
Confidence 7999999999876643 344555410 13567777764 256777888
Q ss_pred HHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 117 l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
+.++++....+.+.|+|.||||..|..+|.+++ +.+ |+++|..
T Consensus 49 l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav 91 (187)
T PF05728_consen 49 LEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAV 91 (187)
T ss_pred HHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCC
Confidence 899999888777999999999999999999986 333 8999874
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.29 E-value=7.4e-11 Score=126.99 Aligned_cols=98 Identities=16% Similarity=0.103 Sum_probs=86.0
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
++++++||++++...|..+.+.|.. +++|+++|.+|+|.+.. ..+++++++++
T Consensus 1069 ~~l~~lh~~~g~~~~~~~l~~~l~~-----------------------~~~v~~~~~~g~~~~~~----~~~~l~~la~~ 1121 (1296)
T PRK10252 1069 PTLFCFHPASGFAWQFSVLSRYLDP-----------------------QWSIYGIQSPRPDGPMQ----TATSLDEVCEA 1121 (1296)
T ss_pred CCeEEecCCCCchHHHHHHHHhcCC-----------------------CCcEEEEECCCCCCCCC----CCCCHHHHHHH
Confidence 5699999999999999999999987 89999999999986532 35699999999
Q ss_pred HHHHHHHhCC-ceEEEEEeChhHHHHHHHHHh---CCcceeEEEEeccC
Q 017731 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVT 161 (367)
Q Consensus 117 l~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 161 (367)
+.+.++.+.. .+++++||||||.++.++|.+ .++++..++++++.
T Consensus 1122 ~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999988654 489999999999999999986 57889999999874
No 107
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.28 E-value=7.5e-11 Score=105.81 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=132.0
Q ss_pred CCeEEEEcCCCCCccch-----HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCH
Q 017731 36 PTKVILITGLAGTHDAW-----GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~-----~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (367)
+++++++|.+-.....| ..++..|.+ +|..|+.+|+++-..+.. ..++
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~----------------------~g~~vfvIsw~nPd~~~~-----~~~~ 159 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLE----------------------QGLDVFVISWRNPDASLA-----AKNL 159 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHH----------------------cCCceEEEeccCchHhhh-----hccH
Confidence 34699999987776655 356777776 799999999997766654 2355
Q ss_pred HHHH-----HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcc-eeEEEEeccCCCCCCCCCc---cchhhHHHHHH
Q 017731 111 KIMA-----KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALLNVTGGGFQCCPK---LDLQTLSIAIR 181 (367)
Q Consensus 111 ~~~~-----~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~ 181 (367)
++++ +.+..+.+..+.++|.++|+|.||+++..+++.++.+ |++++++.+...-....+. .+...+.....
T Consensus 160 edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~ 239 (445)
T COG3243 160 EDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDA 239 (445)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHh
Confidence 6655 4455556666889999999999999999999988877 9999999876432221111 11111111110
Q ss_pred Hhhc--cChhhh-----hhcccCccccHHHHHHHhCCCc---------------hhhHhHHHHHHhhhhcCccccccccc
Q 017731 182 FFRA--KTPEKR-----AAVDLDTHYSQEYLEEYVGSST---------------RRAILYQEYVKGISATGMQSNYGFDG 239 (367)
Q Consensus 182 ~~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (367)
.... ..+... ............+...+..... .......++++.+-.......-.+
T Consensus 240 ~i~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~-- 317 (445)
T COG3243 240 DIVQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGL-- 317 (445)
T ss_pred hhhhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccce--
Confidence 0000 000000 0000001111112222221111 111222222222111110000000
Q ss_pred hhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCccccc
Q 017731 240 QIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHE 305 (367)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e 305 (367)
.-....-.+..++||++++.|++|.++|.+......+.+...++++..++||....=
T Consensus 318 ---------~v~G~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~~sGHIa~vV 374 (445)
T COG3243 318 ---------EVSGTMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGGEVTFVLSRSGHIAGVV 374 (445)
T ss_pred ---------EECCEEechhhcccceEEEeecccccCCHHHHHHHHHhcCCceEEEEecCceEEEEe
Confidence 000111246789999999999999999999999888877445777777889976644
No 108
>PRK10115 protease 2; Provisional
Probab=99.27 E-value=5.2e-10 Score=111.20 Aligned_cols=121 Identities=16% Similarity=0.065 Sum_probs=88.1
Q ss_pred ccccCCcEEEE-EEe------cCCCCeEEEEcCCCCCc--cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 19 ALNDNGIKIFY-RTY------GRGPTKVILITGLAGTH--DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 19 ~~~~~g~~l~~-~~~------g~~~p~vv~lHG~~~~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
+...||.+|.+ ..+ +...|+||++||..+.. ..|.+....|.+ +||.|+
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~----------------------rG~~v~ 478 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD----------------------RGFVYA 478 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH----------------------CCcEEE
Confidence 45678999886 332 12347899999977665 346666667777 699999
Q ss_pred eeCCCCCCCCCCC---C---CCCCCCHHHHHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 90 AFDNRGMGRSSVP---V---KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 90 ~~D~~G~G~S~~~---~---~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.++.||-|.-... . .....+++|+++.+..+++.- ..+++.+.|.|.||.++..++.++|++++++|+..|.
T Consensus 479 ~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~ 558 (686)
T PRK10115 479 IVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPF 558 (686)
T ss_pred EEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCc
Confidence 9999986544321 0 112245666666666665542 2368999999999999999999999999999998876
No 109
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.26 E-value=1e-09 Score=109.86 Aligned_cols=213 Identities=13% Similarity=0.123 Sum_probs=116.1
Q ss_pred CCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CceEEEEEeChhHHH
Q 017731 81 DGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLG--------------------WKQAHVFGHSMGAMI 140 (367)
Q Consensus 81 ~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~--------------------~~~v~lvGhS~Gg~~ 140 (367)
++.+||.|+.+|.||+|.|+.... .+. .+-.+|..++++.+. ..+|.++|.|+||.+
T Consensus 275 ~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 275 FLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 444899999999999999987642 222 233455555555443 358999999999999
Q ss_pred HHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccC-hhhhhhcccCccccHHHHHHHhCC-----C--
Q 017731 141 ACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKT-PEKRAAVDLDTHYSQEYLEEYVGS-----S-- 212 (367)
Q Consensus 141 a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 212 (367)
++.+|...|..++++|..++...... .+.... ...... .. ......+...... .
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~~yd---------------~yr~~G~~~~~~g--~~-ged~d~l~~~~~~r~~~~~~~ 413 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISSWYD---------------YYRENGLVRAPGG--YQ-GEDLDVLAELTYSRNLLAGDY 413 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCcHHH---------------HhhcCCceeccCC--cC-CcchhhHHHHhhhcccCcchh
Confidence 99999998889999999876532110 000000 000000 00 0000000000000 0
Q ss_pred chhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhc---C
Q 017731 213 TRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLY---P 289 (367)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~---~ 289 (367)
.......+.....+........ .....+|.. ......+.++++|+|+|+|..|..+++..+.++.+.+. .
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~----~~y~~fW~~---rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~ 486 (767)
T PRK05371 414 LRHNEACEKLLAELTAAQDRKT----GDYNDFWDD---RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGV 486 (767)
T ss_pred hcchHHHHHHHhhhhhhhhhcC----CCccHHHHh---CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCC
Confidence 0000001111000000000000 001111211 22345667899999999999999999888877777662 2
Q ss_pred CcEEEEcCCCCccccc-ChHHHHHHHHHHHhhh
Q 017731 290 VARMIDLPGGHLVSHE-RTEEVNQALIDLIKAS 321 (367)
Q Consensus 290 ~~~~~~~~ggH~~~~e-~p~~~~~~i~~fl~~~ 321 (367)
..++.+.+++|..... ...++.+.+.+|+...
T Consensus 487 pkkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 487 PKKLFLHQGGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CeEEEEeCCCccCCCchhHHHHHHHHHHHHHhc
Confidence 4667666789965433 4556667777777554
No 110
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.24 E-value=4e-10 Score=89.31 Aligned_cols=134 Identities=15% Similarity=0.117 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccCh
Q 017731 109 TTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTP 188 (367)
Q Consensus 109 ~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (367)
..+++++.+.+.+... .++++||+||+||.++++++.+....|.|+.+++|+-..... ..
T Consensus 42 ~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~---~~---------------- 101 (181)
T COG3545 42 VLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPE---IR---------------- 101 (181)
T ss_pred CHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccc---cc----------------
Confidence 6888888888888887 467999999999999999999877799999999986211100 00
Q ss_pred hhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEe
Q 017731 189 EKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIH 268 (367)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 268 (367)
...+. . +.. ........|.+++.
T Consensus 102 -------------~~~~~-----------------------------t------------f~~---~p~~~lpfps~vva 124 (181)
T COG3545 102 -------------PKHLM-----------------------------T------------FDP---IPREPLPFPSVVVA 124 (181)
T ss_pred -------------hhhcc-----------------------------c------------cCC---CccccCCCceeEEE
Confidence 00000 0 000 01123346999999
Q ss_pred ecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccc---cChHHHHHHHHHHHhhh
Q 017731 269 GRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH---ERTEEVNQALIDLIKAS 321 (367)
Q Consensus 269 G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~---e~p~~~~~~i~~fl~~~ 321 (367)
+++|++++++.++.+++.+ .+.++.+.. ||+--. ....+....+.+|+.+.
T Consensus 125 SrnDp~~~~~~a~~~a~~w--gs~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~~ 179 (181)
T COG3545 125 SRNDPYVSYEHAEDLANAW--GSALVDVGEGGHINAESGFGPWPEGYALLAQLLSRA 179 (181)
T ss_pred ecCCCCCCHHHHHHHHHhc--cHhheecccccccchhhcCCCcHHHHHHHHHHhhhh
Confidence 9999999999999999987 566777764 996543 34556667777776553
No 111
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.23 E-value=6.2e-10 Score=96.14 Aligned_cols=100 Identities=22% Similarity=0.267 Sum_probs=85.0
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
|+++++|+.++....|.++...|.. ...|+..+.||.|.-... ..+++++++.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------------~~~v~~l~a~g~~~~~~~----~~~l~~~a~~ 53 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------------LLPVYGLQAPGYGAGEQP----FASLDDMAAA 53 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------------CceeeccccCcccccccc----cCCHHHHHHH
Confidence 4699999999999999999999998 699999999999863332 4489999998
Q ss_pred HHHHHHHhC-CceEEEEEeChhHHHHHHHHHhC---CcceeEEEEeccCCC
Q 017731 117 VIALMDHLG-WKQAHVFGHSMGAMIACKLAAMV---PERVLSLALLNVTGG 163 (367)
Q Consensus 117 l~~~l~~~~-~~~v~lvGhS~Gg~~a~~~a~~~---p~~v~~lvl~~~~~~ 163 (367)
..+.|.+.. ..+++|+|||+||.+|..+|.+- .+.|..++++++...
T Consensus 54 yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 54 YVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 888777764 45999999999999999999863 457999999998753
No 112
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.21 E-value=1.7e-09 Score=95.93 Aligned_cols=232 Identities=16% Similarity=0.171 Sum_probs=130.8
Q ss_pred CCCeEEEEcCCCCCccchH-Hh-HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCC--CCCCH
Q 017731 35 GPTKVILITGLAGTHDAWG-PQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--TEYTT 110 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~-~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--~~~~~ 110 (367)
.+|.+|.++|.|......+ .+ +..|.+ +|+..+.+..|-||.-...... ...+.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~----------------------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLK----------------------EGIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHH----------------------cCcceEEEecccccccChhHhhcccccch
Confidence 4677888888888654333 23 566666 6999999999999976644321 11122
Q ss_pred HHH----------HHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCc-----cchhh
Q 017731 111 KIM----------AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPK-----LDLQT 175 (367)
Q Consensus 111 ~~~----------~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-----~~~~~ 175 (367)
.|+ +..+..+++..|..++.+.|.||||.+|...|...|..+..+-++++.......... .++..
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~ 228 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDA 228 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHH
Confidence 221 123334455558889999999999999999999999988888888776432111111 11111
Q ss_pred HHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHH
Q 017731 176 LSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQ 255 (367)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (367)
+... +.......... ............. ........+..+.....+ +...
T Consensus 229 L~~q---~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~Ea~~~m~~~m-------------------------d~~T 278 (348)
T PF09752_consen 229 LEKQ---FEDTVYEEEIS-DIPAQNKSLPLDS-MEERRRDREALRFMRGVM-------------------------DSFT 278 (348)
T ss_pred HHHH---hcccchhhhhc-ccccCcccccchh-hccccchHHHHHHHHHHH-------------------------Hhhc
Confidence 1111 00000000000 0000000000000 000000000011000000 0011
Q ss_pred HhHhcC-----ccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCc-ccccChHHHHHHHHHHHh
Q 017731 256 TIRSAG-----FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VSHERTEEVNQALIDLIK 319 (367)
Q Consensus 256 ~l~~i~-----~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~-~~~e~p~~~~~~i~~fl~ 319 (367)
.+.+.. -.+.++.+++|..+|......+.+.+ |++++..++|||. .++-+.+.+.+.|.+-++
T Consensus 279 ~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W-PGsEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 279 HLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW-PGSEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred cccccCCCCCCCcEEEEEecCceEechhhcchHHHhC-CCCeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 122222 24788999999999999988999987 9999999999995 456678899999988765
No 113
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.20 E-value=9.4e-10 Score=97.80 Aligned_cols=119 Identities=17% Similarity=0.219 Sum_probs=75.8
Q ss_pred CCcEEEEEEecC------CCCeEEEEcCCCCCccchHHhH----------HhhcCCCCCCCCchhhhcccccCCCCCCCe
Q 017731 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQL----------KGLAGTDKPNDDDETILQDSVESGDGGAGI 86 (367)
Q Consensus 23 ~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~----------~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (367)
||++|....+-+ .-|+||..|+++.+........ ..+.+ +||
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~GY 58 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE----------------------RGY 58 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH----------------------TT-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh----------------------CCC
Confidence 577777554422 2368999999986541111111 11555 699
Q ss_pred EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 87 EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 87 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.|+..|.||+|.|....... ..+-++|..++++-+ .. .+|.++|.|++|..++.+|...|..+++++...+.
T Consensus 59 ~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~ 135 (272)
T PF02129_consen 59 AVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGW 135 (272)
T ss_dssp EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-
T ss_pred EEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccC
Confidence 99999999999998765321 334455555555544 33 47999999999999999999888899999998876
Q ss_pred CCCCC
Q 017731 162 GGGFQ 166 (367)
Q Consensus 162 ~~~~~ 166 (367)
...+.
T Consensus 136 ~d~~~ 140 (272)
T PF02129_consen 136 SDLYR 140 (272)
T ss_dssp SBTCC
T ss_pred Ccccc
Confidence 54443
No 114
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.20 E-value=2.3e-09 Score=89.23 Aligned_cols=214 Identities=18% Similarity=0.278 Sum_probs=112.4
Q ss_pred CCcEEEEEEecC------CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC
Q 017731 23 NGIKIFYRTYGR------GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM 96 (367)
Q Consensus 23 ~g~~l~~~~~g~------~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~ 96 (367)
+|.+|+.+..-+ ..++||+.+|++-....|..++.+|+. .||+|+.+|...|
T Consensus 11 ~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~----------------------NGFhViRyDsl~H 68 (294)
T PF02273_consen 11 DGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA----------------------NGFHVIRYDSLNH 68 (294)
T ss_dssp TTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT----------------------TT--EEEE---B-
T ss_pred CCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh----------------------CCeEEEecccccc
Confidence 577888766532 236899999999999999999999999 6999999998876
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccc
Q 017731 97 -GRSSVPVKKTEYTTKIMAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLD 172 (367)
Q Consensus 97 -G~S~~~~~~~~~~~~~~~~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 172 (367)
|.|+... ..+++....+++..+++.+ |..++-|+.-|+.|-+|+..|.+- .+.-+|..-+.. -.
T Consensus 69 vGlSsG~I--~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV--------nl 136 (294)
T PF02273_consen 69 VGLSSGDI--NEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV--------NL 136 (294)
T ss_dssp --------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S---------H
T ss_pred ccCCCCCh--hhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee--------eH
Confidence 8888766 4788888888887766654 778899999999999999999853 466677665431 11
Q ss_pred hhhHHHHHHH--hhccChhhhhhcccCc-cc-cHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccc
Q 017731 173 LQTLSIAIRF--FRAKTPEKRAAVDLDT-HY-SQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHK 248 (367)
Q Consensus 173 ~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (367)
..++.....+ +............... .. ...|+. .|+...
T Consensus 137 r~TLe~al~~Dyl~~~i~~lp~dldfeGh~l~~~vFv~------------------------------------dc~e~~ 180 (294)
T PF02273_consen 137 RDTLEKALGYDYLQLPIEQLPEDLDFEGHNLGAEVFVT------------------------------------DCFEHG 180 (294)
T ss_dssp HHHHHHHHSS-GGGS-GGG--SEEEETTEEEEHHHHHH------------------------------------HHHHTT
T ss_pred HHHHHHHhccchhhcchhhCCCcccccccccchHHHHH------------------------------------HHHHcC
Confidence 1122211110 0000000000000000 00 011111 111111
Q ss_pred c--ChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHh-cCCcEEEEcCC-CCcccccCh
Q 017731 249 M--TQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL-YPVARMIDLPG-GHLVSHERT 307 (367)
Q Consensus 249 ~--~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~~~~~g-gH~~~~e~p 307 (367)
+ .......++.+++|++..++++|.++......++.... .+.+++..++| +|-.. |++
T Consensus 181 w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 181 WDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp -SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred CccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 1 12334677888999999999999999998888888765 34678888899 89774 444
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.20 E-value=1.5e-09 Score=84.26 Aligned_cols=181 Identities=18% Similarity=0.163 Sum_probs=125.1
Q ss_pred CCCCeEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC-----CCCCCCCCCC
Q 017731 34 RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM-----GRSSVPVKKT 106 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~-----G~S~~~~~~~ 106 (367)
+.+.+||+.||.|.+.+ .....+..|+. +|+.|..|+++-. |....++. .
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~----------------------~G~~vaRfefpYma~Rrtg~rkPp~~-~ 68 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALAR----------------------RGWLVARFEFPYMAARRTGRRKPPPG-S 68 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHh----------------------CceeEEEeecchhhhccccCCCCcCc-c
Confidence 33447999999987654 56778888888 7999999998754 32222222 2
Q ss_pred CCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhcc
Q 017731 107 EYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAK 186 (367)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (367)
..-..++...+.++...+...+.++-|+||||-++-+++..-...|++|++++=+.-+. .
T Consensus 69 ~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhpp--------------------G 128 (213)
T COG3571 69 GTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPP--------------------G 128 (213)
T ss_pred ccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCC--------------------C
Confidence 33456677888888888877799999999999999999887655699999998431000 0
Q ss_pred ChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEE
Q 017731 187 TPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSV 266 (367)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvli 266 (367)
.++ ....+.+..++.|++|
T Consensus 129 KPe-------------------------------------------------------------~~Rt~HL~gl~tPtli 147 (213)
T COG3571 129 KPE-------------------------------------------------------------QLRTEHLTGLKTPTLI 147 (213)
T ss_pred Ccc-------------------------------------------------------------cchhhhccCCCCCeEE
Confidence 000 0112346677899999
Q ss_pred EeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccc----------cChHHHHHHHHHHHhh
Q 017731 267 IHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH----------ERTEEVNQALIDLIKA 320 (367)
Q Consensus 267 i~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~----------e~p~~~~~~i~~fl~~ 320 (367)
.+|+.|.+-..+.+..+. +.+..+++++.+ .|.+-- ++-...++.|..|+..
T Consensus 148 ~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 148 TQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred eecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999999998876664333 357889999987 784421 2334456666666654
No 116
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.17 E-value=6.7e-09 Score=98.51 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=84.4
Q ss_pred CcEEEEEEec-----CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC-CCC
Q 017731 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR-GMG 97 (367)
Q Consensus 24 g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~-G~G 97 (367)
+..++|.-.. +..|+||+++|.++.+..+.-+.+ ...-....+. .++.. -+---.+...++.+|.| |+|
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E-~GP~~i~~~~-~~~~~---n~~sW~~~~~~l~iDqP~G~G 134 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAE-NGPCLMNETT-GDIYN---NTYSWNNEAYVIYVDQPAGVG 134 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhcc-CCCeEEeCCC-CceeE---CCcccccccCeEEEeCCCCcC
Confidence 4567776554 245799999999998865532221 1110000000 00000 00000134689999975 999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCceEEEEEeChhHHHHHHHHHhC----------CcceeEEEEecc
Q 017731 98 RSSVPVKKTEYTTKIMAKDVIALMDH-------LGWKQAHVFGHSMGAMIACKLAAMV----------PERVLSLALLNV 160 (367)
Q Consensus 98 ~S~~~~~~~~~~~~~~~~dl~~~l~~-------~~~~~v~lvGhS~Gg~~a~~~a~~~----------p~~v~~lvl~~~ 160 (367)
.|.........+.++.++|+.++++. ++..+++|+|||+||..+..+|.+- +-.++|+++-++
T Consensus 135 ~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 135 FSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 98765432345668888999888874 3447899999999999998888752 124789998887
Q ss_pred CCCC
Q 017731 161 TGGG 164 (367)
Q Consensus 161 ~~~~ 164 (367)
...+
T Consensus 215 ~~dp 218 (462)
T PTZ00472 215 LTDP 218 (462)
T ss_pred ccCh
Confidence 6543
No 117
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.16 E-value=5.9e-10 Score=95.61 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=77.8
Q ss_pred EEEEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCC
Q 017731 27 IFYRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKT 106 (367)
Q Consensus 27 l~~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~ 106 (367)
+.+-.....=|++||+||+......|..+++.++. .||-|+++|+...+...... .
T Consensus 8 v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAS----------------------hGyIVV~~d~~~~~~~~~~~--~ 63 (259)
T PF12740_consen 8 VYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVAS----------------------HGYIVVAPDLYSIGGPDDTD--E 63 (259)
T ss_pred EEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHh----------------------CceEEEEecccccCCCCcch--h
Confidence 33433333458899999999888889999999999 79999999966543321111 1
Q ss_pred CCCHHHHHHHHHHHHH-Hh------CCceEEEEEeChhHHHHHHHHHhC-----CcceeEEEEeccCC
Q 017731 107 EYTTKIMAKDVIALMD-HL------GWKQAHVFGHSMGAMIACKLAAMV-----PERVLSLALLNVTG 162 (367)
Q Consensus 107 ~~~~~~~~~dl~~~l~-~~------~~~~v~lvGhS~Gg~~a~~~a~~~-----p~~v~~lvl~~~~~ 162 (367)
..+..++++.+.+-++ .+ +..++.|.|||-||-+++.++..+ +.+++++++++|.-
T Consensus 64 ~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 64 VASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 1122333333322121 11 345899999999999999999887 56899999999873
No 118
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.14 E-value=2.3e-10 Score=97.63 Aligned_cols=169 Identities=18% Similarity=0.149 Sum_probs=90.7
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCC-----CCCCCC--------
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRG-----MGRSSV-------- 101 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G-----~G~S~~-------- 101 (367)
.++.||++||++.+...|+.....|.+.++. .+++++.+|-|- -|....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~------------------~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~ 64 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKK------------------LDFEFVFVDGPHEVPPGPGIEPFSSEAESAF 64 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHH------------------TT-EEEEE--SEE---GGG-SS---HHHHHH
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhh------------------CcEEEEEecCCcccCCccccccccccccccc
Confidence 3567999999999999998766666552110 167777777441 111110
Q ss_pred ----CC---------CCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhC--------CcceeEEEEecc
Q 017731 102 ----PV---------KKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--------PERVLSLALLNV 160 (367)
Q Consensus 102 ----~~---------~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~--------p~~v~~lvl~~~ 160 (367)
+. ......+++..+.+.+.++..|. =..|+|+|+||.+|..++... ...++-+|++++
T Consensus 65 ~~~~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg 143 (212)
T PF03959_consen 65 GDPGPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISG 143 (212)
T ss_dssp HHTT--EESS---S-SGGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES-
T ss_pred CCCCcceeeeecCCCcccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcc
Confidence 00 00122356666677777777652 256999999999999988642 124788888887
Q ss_pred CCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccch
Q 017731 161 TGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQ 240 (367)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (367)
..+.. .. .
T Consensus 144 ~~p~~------~~----------------------------------------------------~-------------- 151 (212)
T PF03959_consen 144 FPPPD------PD----------------------------------------------------Y-------------- 151 (212)
T ss_dssp ---EE------E-----------------------------------------------------G--------------
T ss_pred cCCCc------hh----------------------------------------------------h--------------
Confidence 63110 00 0
Q ss_pred hhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCC-cEEEEcCCCCcccccC
Q 017731 241 IHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPV-ARMIDLPGGHLVSHER 306 (367)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~-~~~~~~~ggH~~~~e~ 306 (367)
.+.. .-..+++|+|.|+|++|.+++++.++.+.+.+ .+ .+++..++||.++...
T Consensus 152 ----------~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~-~~~~~v~~h~gGH~vP~~~ 206 (212)
T PF03959_consen 152 ----------QELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMF-DPDARVIEHDGGHHVPRKK 206 (212)
T ss_dssp ----------TTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHH-HHHEEEEEESSSSS----H
T ss_pred ----------hhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhc-cCCcEEEEECCCCcCcCCh
Confidence 0000 12345789999999999999999999999987 44 7888889999988653
No 119
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.14 E-value=1.3e-09 Score=88.52 Aligned_cols=95 Identities=26% Similarity=0.321 Sum_probs=75.9
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
.+|++-|=|+-...=..+.+.|++ +|+.|+.+|-+-+=.+ .-+.++.++|+
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~----------------------~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl 54 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAK----------------------QGVPVVGVDSLRYFWS-------ERTPEQTAADL 54 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHH----------------------CCCeEEEechHHHHhh-------hCCHHHHHHHH
Confidence 478888887776666778889988 7999999997655444 23677788888
Q ss_pred HHHHHHh----CCceEEEEEeChhHHHHHHHHHhCC----cceeEEEEeccC
Q 017731 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVP----ERVLSLALLNVT 161 (367)
Q Consensus 118 ~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p----~~v~~lvl~~~~ 161 (367)
..++++. +.++++|+|+|+|+-+.-....+.| ++|..++|+++.
T Consensus 55 ~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~ 106 (192)
T PF06057_consen 55 ARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPS 106 (192)
T ss_pred HHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccC
Confidence 8777654 6789999999999988888777766 479999999986
No 120
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.11 E-value=5.9e-09 Score=86.92 Aligned_cols=256 Identities=13% Similarity=0.102 Sum_probs=140.2
Q ss_pred CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC---CCC----CCC
Q 017731 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS---VPV----KKT 106 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~---~~~----~~~ 106 (367)
..++.+++++|.+|....|.++...|...+. +.+.++.+...||-.-. ... ...
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-------------------~r~~~wtIsh~~H~~~P~sl~~~~s~~~~e 87 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-------------------DRLPVWTISHAGHALMPASLREDHSHTNEE 87 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-------------------cccceeEEeccccccCCccccccccccccc
Confidence 4567899999999999999999988876321 23568888877775443 111 124
Q ss_pred CCCHHHHHHHHHHHHHHhC--CceEEEEEeChhHHHHHHHHHhCC--cceeEEEEeccCCCCCCCCCccchhhHHHHHHH
Q 017731 107 EYTTKIMAKDVIALMDHLG--WKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRF 182 (367)
Q Consensus 107 ~~~~~~~~~dl~~~l~~~~--~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (367)
.++++++++.-.++++..- ..+++++|||.|+++.++...... -.|.+++++-|+.-.....|.-. .+.....+
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~--~~t~~l~~ 165 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGI--RLTKVLRY 165 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCce--Eeeeeeee
Confidence 6789999998888888762 358999999999999999887432 36888998887632111111000 00000000
Q ss_pred hhccChhhhhhcccCccccHHHHHHH-----hCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHh
Q 017731 183 FRAKTPEKRAAVDLDTHYSQEYLEEY-----VGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTI 257 (367)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (367)
+... ..........+.+.+++.+ +.-.....+.....+......-.+....+..+-.. .......+.+
T Consensus 166 ~~hv---~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~----eV~~~d~e~~ 238 (301)
T KOG3975|consen 166 LPHV---VSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEME----EVTTRDIEYC 238 (301)
T ss_pred ehhh---hheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHH----HHHHhHHHHH
Confidence 0000 0000000001111111111 11111111111110000000000000000000000 0011223445
Q ss_pred HhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEc-CC-CCcccccChHHHHHHHHHHH
Q 017731 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDL-PG-GHLVSHERTEEVNQALIDLI 318 (367)
Q Consensus 258 ~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~-~g-gH~~~~e~p~~~~~~i~~fl 318 (367)
.+-.+-+.+.+|.+|.++|.++...+.+.+ +..++..- +. .|.+...+.+..++.+.+.+
T Consensus 239 een~d~l~Fyygt~DgW~p~~~~d~~kdd~-~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 239 EENLDSLWFYYGTNDGWVPSHYYDYYKDDV-PEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HhcCcEEEEEccCCCCCcchHHHHHHhhhc-chhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 555678999999999999999999999987 54444433 44 99998888888888887765
No 121
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.09 E-value=2.6e-08 Score=86.45 Aligned_cols=206 Identities=19% Similarity=0.231 Sum_probs=115.8
Q ss_pred CeEEEEcCCCCCccchHHhHHhhc-CCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC----CCCCCCC--------
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLA-GTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSVPV-------- 103 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----G~S~~~~-------- 103 (367)
.|.||+||++++...+..++..+. +...+ +..-++.++--|+ |.=....
T Consensus 12 tPTifihG~~gt~~s~~~mi~~~~~~~~~~------------------~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~ 73 (255)
T PF06028_consen 12 TPTIFIHGYGGTANSFNHMINRLENKQGVA------------------QKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVN 73 (255)
T ss_dssp EEEEEE--TTGGCCCCHHHHHHHHHCSTS-------------------S-EEEEEEETTSEEEEES---TT-SS-EEEEE
T ss_pred CcEEEECCCCCChhHHHHHHHHHHhhcCCC------------------ceEEEEEECCCCeEEEeeecCCCCCCCEEEEE
Confidence 369999999999999999999997 52100 1222333443343 2211110
Q ss_pred -CCCC-CCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCc-----ceeEEEEeccCCCCCCCCCccc
Q 017731 104 -KKTE-YTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTGGGFQCCPKLD 172 (367)
Q Consensus 104 -~~~~-~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~~~ 172 (367)
.... .+....++.+..++..+ +++++-+|||||||..++.++..+.. ++.++|.++++..+.......
T Consensus 74 F~~n~~~~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~- 152 (255)
T PF06028_consen 74 FEDNRNANYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDD- 152 (255)
T ss_dssp ESSTT-CHHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--
T ss_pred ecCCCcCCHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccccc-
Confidence 0112 35777788887777665 77899999999999999999887532 589999999875332211000
Q ss_pred hhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChH
Q 017731 173 LQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQK 252 (367)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (367)
... ...... + .......++.+.....
T Consensus 153 -~~~---------------~~~~~~------------g-p~~~~~~y~~l~~~~~------------------------- 178 (255)
T PF06028_consen 153 -QNQ---------------NDLNKN------------G-PKSMTPMYQDLLKNRR------------------------- 178 (255)
T ss_dssp -TTT---------------T-CSTT--------------BSS--HHHHHHHHTHG-------------------------
T ss_pred -chh---------------hhhccc------------C-CcccCHHHHHHHHHHH-------------------------
Confidence 000 000000 0 0001111222211100
Q ss_pred HHHHhHhcCccEEEEeec------CCccCcHHHHHHHHHHhcC---CcEEEEcCC---CCcccccChHHHHHHHHHHHh
Q 017731 253 DIQTIRSAGFLVSVIHGR------HDVIAQICYARRLAEKLYP---VARMIDLPG---GHLVSHERTEEVNQALIDLIK 319 (367)
Q Consensus 253 ~~~~l~~i~~Pvlii~G~------~D~~~p~~~~~~~~~~~~~---~~~~~~~~g---gH~~~~e~p~~~~~~i~~fl~ 319 (367)
..+ .-++.||-|.|. .|..||...+..+...+.+ ..+-.++.| .|.-..|++ +|.+.|.+||-
T Consensus 179 --~~~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 179 --KNF-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp --GGS-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred --hhC-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 000 123679999998 8999999888877776533 234445544 688877766 78899999984
No 122
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.06 E-value=1.1e-08 Score=84.33 Aligned_cols=61 Identities=26% Similarity=0.417 Sum_probs=49.2
Q ss_pred HhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCcccccChHHHHHHHHHHHhhh
Q 017731 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHLVSHERTEEVNQALIDLIKAS 321 (367)
Q Consensus 258 ~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~~ 321 (367)
..+++|.|.|.|+.|.++|...+..+++.+ ++..++.-+|||+++-.. ...+.|.+|+...
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~-~~a~vl~HpggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESF-KDATVLEHPGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhc-CCCeEEecCCCccCCCch--HHHHHHHHHHHHH
Confidence 467899999999999999999999999987 888888889999998665 4444555555443
No 123
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.06 E-value=3.6e-09 Score=90.35 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=60.6
Q ss_pred EEEEcCCCCC---ccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 39 VILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 39 vv~lHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
||++||.+.. ......+...+++. .|+.|+.+|+|=..... ..-.++|..+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~---------------------~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~ 54 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE---------------------RGFVVVSIDYRLAPEAP-----FPAALEDVKA 54 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH---------------------HTSEEEEEE---TTTSS-----TTHHHHHHHH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh---------------------ccEEEEEeecccccccc-----cccccccccc
Confidence 7899998743 34455566666631 49999999999432211 1112344444
Q ss_pred HHHHHHHH-----hCCceEEEEEeChhHHHHHHHHHhCCc----ceeEEEEeccC
Q 017731 116 DVIALMDH-----LGWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (367)
Q Consensus 116 dl~~~l~~-----~~~~~v~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (367)
.+..+++. .+.++++++|+|.||.+++.++.+..+ .++++++++|.
T Consensus 55 a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~ 109 (211)
T PF07859_consen 55 AYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPW 109 (211)
T ss_dssp HHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCH
T ss_pred ceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhccccc
Confidence 44444444 344689999999999999999976433 48999999974
No 124
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.02 E-value=9.3e-09 Score=87.14 Aligned_cols=107 Identities=17% Similarity=0.171 Sum_probs=69.4
Q ss_pred CCCeEEEEcCCCCCccchHH--hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCC------C-CCC
Q 017731 35 GPTKVILITGLAGTHDAWGP--QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV------P-VKK 105 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~--~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~------~-~~~ 105 (367)
+.|.||++||.+.+.+.+.. -+..|++. .||-|+.++......... . ...
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~---------------------~GfivvyP~~~~~~~~~~cw~w~~~~~~~ 73 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADR---------------------EGFIVVYPEQSRRANPQGCWNWFSDDQQR 73 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhc---------------------CCeEEEcccccccCCCCCccccccccccc
Confidence 34789999999999876644 23456652 589999988542110000 0 000
Q ss_pred CCCCHHHHHHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 106 TEYTTKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 106 ~~~~~~~~~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
..-+...+.+-+..+..+.++ ++|++.|+|.||+++..++..+|+.+.++...++..
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 011122222333334444444 589999999999999999999999999999888763
No 125
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.00 E-value=1e-08 Score=83.02 Aligned_cols=186 Identities=18% Similarity=0.165 Sum_probs=111.1
Q ss_pred EEEEEEecC--CCCeEEEEcCCC---CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCC
Q 017731 26 KIFYRTYGR--GPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSS 100 (367)
Q Consensus 26 ~l~~~~~g~--~~p~vv~lHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~ 100 (367)
+-....+|+ ..+..||+||.- ++...--..+..+.+ +||+|..++ ++.+.
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~----------------------~gY~vasvg---Y~l~~ 109 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR----------------------RGYRVASVG---YNLCP 109 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhh----------------------cCeEEEEec---cCcCc
Confidence 334455553 456899999852 222222223333333 599999985 45554
Q ss_pred CCCCCCCCCHHHHHHHH----HHHHHHhCC-ceEEEEEeChhHHHHHHHHHh-CCcceeEEEEeccCCCCCCCCCccchh
Q 017731 101 VPVKKTEYTTKIMAKDV----IALMDHLGW-KQAHVFGHSMGAMIACKLAAM-VPERVLSLALLNVTGGGFQCCPKLDLQ 174 (367)
Q Consensus 101 ~~~~~~~~~~~~~~~dl----~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~ 174 (367)
.. .++++...++ .-+++.... +.+.+-|||.|+.+++.+..+ +..+|.+++++++...
T Consensus 110 q~-----htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~----------- 173 (270)
T KOG4627|consen 110 QV-----HTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD----------- 173 (270)
T ss_pred cc-----ccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh-----------
Confidence 32 2444444444 444444433 456677999999999998765 4458999999887520
Q ss_pred hHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccc-hhhhhhccccChHH
Q 017731 175 TLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDG-QIHACWMHKMTQKD 253 (367)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 253 (367)
+++..+..... ..++.. ... .....
T Consensus 174 ------------------------------l~EL~~te~g~------------------dlgLt~~~ae------~~Scd 199 (270)
T KOG4627|consen 174 ------------------------------LRELSNTESGN------------------DLGLTERNAE------SVSCD 199 (270)
T ss_pred ------------------------------HHHHhCCcccc------------------ccCcccchhh------hcCcc
Confidence 00000000000 000000 000 00112
Q ss_pred HHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccCh
Q 017731 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERT 307 (367)
Q Consensus 254 ~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p 307 (367)
+..+..++.|+|++.|+.|.---.+..+.++..+ .++++..+++ +|+-.++..
T Consensus 200 l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~-~~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 200 LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQL-RKASFTLFKNYDHYDIIEET 253 (270)
T ss_pred HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHh-hhcceeecCCcchhhHHHHh
Confidence 3456778899999999999877778889999887 7799999999 998776643
No 126
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.99 E-value=1.7e-08 Score=85.71 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=72.4
Q ss_pred EEcCCC--CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017731 41 LITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVI 118 (367)
Q Consensus 41 ~lHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~ 118 (367)
++|+.+ ++...|.++...|.. .+.|+++|.+|++.+.... .+.+++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~-----------------------~~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~ 54 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG-----------------------RRDVSALPLPGFGPGEPLP----ASADALVEAQA 54 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC-----------------------CccEEEecCCCCCCCCCCC----CCHHHHHHHHH
Confidence 455544 566789999999987 7999999999998765432 36777777665
Q ss_pred HHHHH-hCCceEEEEEeChhHHHHHHHHHh---CCcceeEEEEeccCC
Q 017731 119 ALMDH-LGWKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (367)
Q Consensus 119 ~~l~~-~~~~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 162 (367)
..+.. .+..+++++|||+||.++...+.+ .++.+.+++++++..
T Consensus 55 ~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 55 EAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 54443 445789999999999999998886 356789999988753
No 127
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=5.5e-08 Score=97.39 Aligned_cols=221 Identities=16% Similarity=0.169 Sum_probs=138.0
Q ss_pred ccccCCcEEEEEEecC-------CCCeEEEEcCCCCCccc---h-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeE
Q 017731 19 ALNDNGIKIFYRTYGR-------GPTKVILITGLAGTHDA---W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE 87 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~-------~~p~vv~lHG~~~~~~~---~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 87 (367)
.+..+|...++...-+ .-|.+|.+||.+++... | ..+...+... .|+.
T Consensus 502 ~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~---------------------~g~~ 560 (755)
T KOG2100|consen 502 KIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSS---------------------RGFA 560 (755)
T ss_pred EEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhcc---------------------CCeE
Confidence 3445788887765432 33678889998873321 1 1222222221 6999
Q ss_pred EEeeCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhCCcc-eeEEEEe
Q 017731 88 VCAFDNRGMGRSSVPV------KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPER-VLSLALL 158 (367)
Q Consensus 88 vi~~D~~G~G~S~~~~------~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~-v~~lvl~ 158 (367)
|+.+|.||.|.....- .-.....+|....+..+++.. +.+++.++|+|.||.+++..+...|+. ++..+.+
T Consensus 561 v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvav 640 (755)
T KOG2100|consen 561 VLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAV 640 (755)
T ss_pred EEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEe
Confidence 9999999988765331 112345666666666666654 446899999999999999999999854 5555999
Q ss_pred ccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCcccccccc
Q 017731 159 NVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFD 238 (367)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (367)
+|...- . .+...+.+++.+........+++
T Consensus 641 aPVtd~---------~------------------------~yds~~terymg~p~~~~~~y~e----------------- 670 (755)
T KOG2100|consen 641 APVTDW---------L------------------------YYDSTYTERYMGLPSENDKGYEE----------------- 670 (755)
T ss_pred cceeee---------e------------------------eecccccHhhcCCCccccchhhh-----------------
Confidence 986310 0 01111112221111111111110
Q ss_pred chhhhhhccccChHHHHHhHhcCccE-EEEeecCCccCcHHHHHHHHHHhc---CCcEEEEcCC-CCcccccC-hHHHHH
Q 017731 239 GQIHACWMHKMTQKDIQTIRSAGFLV-SVIHGRHDVIAQICYARRLAEKLY---PVARMIDLPG-GHLVSHER-TEEVNQ 312 (367)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~i~~Pv-lii~G~~D~~~p~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~e~-p~~~~~ 312 (367)
......+..++.|. |++||+.|.-++.+.+..+.+.+. -..++.++|+ +|.+..-. -..+..
T Consensus 671 ------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~ 738 (755)
T KOG2100|consen 671 ------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYE 738 (755)
T ss_pred ------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHH
Confidence 01112234444455 999999999999998888888772 2478899998 99887644 367788
Q ss_pred HHHHHHhhhc
Q 017731 313 ALIDLIKASE 322 (367)
Q Consensus 313 ~i~~fl~~~~ 322 (367)
.+..|+..+-
T Consensus 739 ~~~~~~~~~~ 748 (755)
T KOG2100|consen 739 KLDRFLRDCF 748 (755)
T ss_pred HHHHHHHHHc
Confidence 8899998654
No 128
>PRK04940 hypothetical protein; Provisional
Probab=98.98 E-value=1.3e-07 Score=76.73 Aligned_cols=51 Identities=12% Similarity=0.199 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHHh---C-CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 109 TTKIMAKDVIALMDHL---G-WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 109 ~~~~~~~dl~~~l~~~---~-~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
+..+-++.+.+.+..+ + .+++.|||+|+||+.|..+|.++. + ..|+++|..
T Consensus 38 ~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 38 HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCC
Confidence 3444445555555432 1 257999999999999999999985 3 678899874
No 129
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.97 E-value=6e-09 Score=89.37 Aligned_cols=108 Identities=17% Similarity=0.170 Sum_probs=70.3
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
+.+|||+||.+++...++.+...+.+. .........++++++|+......-. ...+.+.++
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~--------------~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~ 64 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRK--------------ALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAE 64 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhh--------------hhhccCccceeEEEeccCccccccc-----cccHHHHHH
Confidence 346999999999988888777666320 0000111368999999876432221 112333333
Q ss_pred ----HHHHHHHHh-----CCceEEEEEeChhHHHHHHHHHhCC---cceeEEEEeccCC
Q 017731 116 ----DVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVP---ERVLSLALLNVTG 162 (367)
Q Consensus 116 ----dl~~~l~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 162 (367)
.+..+++.+ +.+++++|||||||.++-.++...+ +.|+.+|.++++.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 333444444 4578999999999999988877543 5799999999874
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.94 E-value=3.9e-09 Score=97.48 Aligned_cols=103 Identities=20% Similarity=0.252 Sum_probs=59.5
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCC-CCC-C----------
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVP-V---------- 103 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S-~~~-~---------- 103 (367)
-|+|||-||++++...|..++..|+. +||-|+++|+|..-.+ ... .
T Consensus 100 ~PvvIFSHGlgg~R~~yS~~~~eLAS----------------------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~ 157 (379)
T PF03403_consen 100 FPVVIFSHGLGGSRTSYSAICGELAS----------------------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPY 157 (379)
T ss_dssp EEEEEEE--TT--TTTTHHHHHHHHH----------------------TT-EEEEE---SS-SSEEEE-SSHHHHHHT--
T ss_pred CCEEEEeCCCCcchhhHHHHHHHHHh----------------------CCeEEEEeccCCCceeEEEeccCCCccccccc
Confidence 47899999999999999999999999 7999999999943111 000 0
Q ss_pred -----C-----CCCC----C-------HHHHHHHHHHHHHHh--------------------------CCceEEEEEeCh
Q 017731 104 -----K-----KTEY----T-------TKIMAKDVIALMDHL--------------------------GWKQAHVFGHSM 136 (367)
Q Consensus 104 -----~-----~~~~----~-------~~~~~~dl~~~l~~~--------------------------~~~~v~lvGhS~ 136 (367)
+ .... . ++.-++++..+++.+ +.+++.++|||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSF 237 (379)
T PF03403_consen 158 VVEYLEEEWIPLRDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSF 237 (379)
T ss_dssp -------EEEE-----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETH
T ss_pred cccccccceeccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCc
Confidence 0 0000 0 011122333333221 234789999999
Q ss_pred hHHHHHHHHHhCCcceeEEEEeccC
Q 017731 137 GAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 137 Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
||..++..+... .++++.|++++.
T Consensus 238 GGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 238 GGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHHHHHHH--TT--EEEEES--
T ss_pred hHHHHHHHHhhc-cCcceEEEeCCc
Confidence 999999988876 679999999974
No 131
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.93 E-value=1.8e-08 Score=90.38 Aligned_cols=82 Identities=24% Similarity=0.258 Sum_probs=49.7
Q ss_pred cCCCCCCCeEEEeeCCCCCCCCCCCCCC---CCCCHHHHHH---------------HHHHHHHHh------CCceEEEEE
Q 017731 78 ESGDGGAGIEVCAFDNRGMGRSSVPVKK---TEYTTKIMAK---------------DVIALMDHL------GWKQAHVFG 133 (367)
Q Consensus 78 ~~~~~~~g~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~---------------dl~~~l~~~------~~~~v~lvG 133 (367)
+..|+++||-|+++|.+|+|+....... ..++.+.++. |....++.+ +.++|.++|
T Consensus 153 g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~G 232 (390)
T PF12715_consen 153 GDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMG 232 (390)
T ss_dssp HHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEE
T ss_pred HHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEe
Confidence 4445558999999999999997654321 1222222222 222234443 336899999
Q ss_pred eChhHHHHHHHHHhCCcceeEEEEecc
Q 017731 134 HSMGAMIACKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 134 hS~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (367)
+||||..++.+|+.. ++|+..|..+-
T Consensus 233 fSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 233 FSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp EGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred ecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 999999999999986 58888877664
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.91 E-value=1e-08 Score=86.36 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=73.8
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCC-CCHHHHH
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTE-YTTKIMA 114 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~ 114 (367)
-|.|+|+||+.-....|..++..++. +||-|+++++-..-. +....+ -+....+
T Consensus 46 yPVilF~HG~~l~ns~Ys~lL~HIAS----------------------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~ 100 (307)
T PF07224_consen 46 YPVILFLHGFNLYNSFYSQLLAHIAS----------------------HGFIVVAPQLYTLFP---PDGQDEIKSAASVI 100 (307)
T ss_pred ccEEEEeechhhhhHHHHHHHHHHhh----------------------cCeEEEechhhcccC---CCchHHHHHHHHHH
Confidence 47899999999999999999999999 799999999864211 111001 1223333
Q ss_pred HHHHHHHHHh-------CCceEEEEEeChhHHHHHHHHHhCC--cceeEEEEeccCC
Q 017731 115 KDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTG 162 (367)
Q Consensus 115 ~dl~~~l~~~-------~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~ 162 (367)
+++.+-++++ +..++.++|||.||-.|+.+|..+. -.+++||.++|..
T Consensus 101 ~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 101 NWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 3343333333 3458999999999999999999873 2588999999874
No 133
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.86 E-value=5.5e-08 Score=79.62 Aligned_cols=188 Identities=19% Similarity=0.232 Sum_probs=114.4
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCch-hhhcccccCCCCCCCeEEEee-CCCCCCCCCCCCCCCCCCHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDE-TILQDSVESGDGGAGIEVCAF-DNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~g~~vi~~-D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.+||++||.+.++..|..++..|.-. + .. .+|.+|+-+...-.|...-++ |......+... ..-+....+
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~--N---iKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~---d~~~~~~aa 75 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLP--N---IKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE---DEEGLHRAA 75 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCC--C---eeEEcCCCCCCcccccCCCcccceecceeeCcccch---hhhHHHHHH
Confidence 37999999999999998888876541 0 11 134444444444333322222 22222222211 122455556
Q ss_pred HHHHHHHHHh---CC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChh
Q 017731 115 KDVIALMDHL---GW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPE 189 (367)
Q Consensus 115 ~dl~~~l~~~---~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (367)
+.+..+++.. |+ +++.+-|.|+||++++..+..+|..+.+..-..+..+...
T Consensus 76 ~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~----------------------- 132 (206)
T KOG2112|consen 76 DNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS----------------------- 132 (206)
T ss_pred HHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch-----------------------
Confidence 6666666643 43 4789999999999999999999888888877765421000
Q ss_pred hhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhHhcCccEEEEee
Q 017731 190 KRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHG 269 (367)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G 269 (367)
. .+. . | . ...+ ..|++..||
T Consensus 133 --~-----------~~~--------------------------------~-----~---~-----~~~~--~~~i~~~Hg 152 (206)
T KOG2112|consen 133 --I-----------GLP--------------------------------G-----W---L-----PGVN--YTPILLCHG 152 (206)
T ss_pred --h-----------hcc--------------------------------C-----C---c-----cccC--cchhheecc
Confidence 0 000 0 0 0 0000 469999999
Q ss_pred cCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCcccccChHHHHHHHH
Q 017731 270 RHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHERTEEVNQALI 315 (367)
Q Consensus 270 ~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~e~p~~~~~~i~ 315 (367)
+.|+++|....+...+.+ ...++++.++| +|...-+.-+++...|.
T Consensus 153 ~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 153 TADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred cCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 999999987665555544 23478888999 99887665555544443
No 134
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.85 E-value=1.1e-08 Score=95.68 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=72.5
Q ss_pred CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 017731 47 GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW 126 (367)
Q Consensus 47 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~ 126 (367)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.........+++.+.+.++.+..+.
T Consensus 105 ~~~~~~~~li~~L~~----------------------~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~ 161 (440)
T PLN02733 105 DEVYYFHDMIEQLIK----------------------WGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGG 161 (440)
T ss_pred chHHHHHHHHHHHHH----------------------cCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCC
Confidence 455789999999998 58755 8899999998765321112244555555555566677
Q ss_pred ceEEEEEeChhHHHHHHHHHhCCcc----eeEEEEeccCCCCC
Q 017731 127 KQAHVFGHSMGAMIACKLAAMVPER----VLSLALLNVTGGGF 165 (367)
Q Consensus 127 ~~v~lvGhS~Gg~~a~~~a~~~p~~----v~~lvl~~~~~~~~ 165 (367)
++++|+||||||.++..++..+|+. |+++|.++++..+.
T Consensus 162 ~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 162 KKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCC
Confidence 8999999999999999999988864 78999998875443
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.85 E-value=3.1e-08 Score=84.43 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHh---CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCC
Q 017731 113 MAKDVIALMDHL---GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGG 164 (367)
Q Consensus 113 ~~~dl~~~l~~~---~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (367)
+.+...+++... ..++|.|+|.|.||-+|+.+|..+| .|+++|.++|+...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 345555555544 2358999999999999999999998 79999999987543
No 136
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.83 E-value=5.8e-07 Score=81.61 Aligned_cols=101 Identities=20% Similarity=0.126 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCCC---CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHH
Q 017731 35 GPTKVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (367)
Q Consensus 35 ~~p~vv~lHG~~~---~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (367)
+.|+||++||.+. +......++..+... .|+.|+.+|+|-.-+-. ....++
T Consensus 78 ~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~---------------------~g~~vv~vdYrlaPe~~-----~p~~~~ 131 (312)
T COG0657 78 TAPVVLYLHGGGWVLGSLRTHDALVARLAAA---------------------AGAVVVSVDYRLAPEHP-----FPAALE 131 (312)
T ss_pred CCcEEEEEeCCeeeecChhhhHHHHHHHHHH---------------------cCCEEEecCCCCCCCCC-----CCchHH
Confidence 3578999999864 334443444444432 69999999998543332 233455
Q ss_pred HHHHHHHHHHHH---hC--CceEEEEEeChhHHHHHHHHHhCCc----ceeEEEEeccC
Q 017731 112 IMAKDVIALMDH---LG--WKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVT 161 (367)
Q Consensus 112 ~~~~dl~~~l~~---~~--~~~v~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~ 161 (367)
+..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+ ...+.+++.|.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~ 190 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPL 190 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecc
Confidence 544444444433 33 4679999999999999999876433 46788888876
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.77 E-value=4.5e-09 Score=93.62 Aligned_cols=93 Identities=26% Similarity=0.253 Sum_probs=65.2
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC--CCCCCCCCC----CCCC
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM--GRSSVPVKK----TEYT 109 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--G~S~~~~~~----~~~~ 109 (367)
.|.|++-||.|++...|..+.+.|++ .||-|.++|.+|. |........ ...-
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs----------------------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~ 128 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLAS----------------------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAE 128 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhh----------------------CceEEEeccCCCcccccCChhhcCCcccchhh
Confidence 47899999999999999999999999 6999999999984 333221110 1111
Q ss_pred HHHHHHHHHHHHHH-------------hCCceEEEEEeChhHHHHHHHHHhCCc
Q 017731 110 TKIMAKDVIALMDH-------------LGWKQAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 110 ~~~~~~dl~~~l~~-------------~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
+.+...|+..+++. ++..+|.++|||+||..++..+..+.+
T Consensus 129 ~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 129 WWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 22333344433332 234589999999999999998876543
No 138
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=2.5e-07 Score=87.02 Aligned_cols=205 Identities=18% Similarity=0.220 Sum_probs=131.3
Q ss_pred CCCeEEEEcCCCCCc---cchHH--h--HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC----
Q 017731 35 GPTKVILITGLAGTH---DAWGP--Q--LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV---- 103 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~---~~~~~--~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~---- 103 (367)
.-|+++++-|.++-. ..|.. . ...|+. .||-|+.+|.||.-.....-
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las----------------------lGy~Vv~IDnRGS~hRGlkFE~~i 698 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS----------------------LGYVVVFIDNRGSAHRGLKFESHI 698 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhh----------------------cceEEEEEcCCCccccchhhHHHH
Confidence 347899999988643 22221 1 234555 69999999999865443211
Q ss_pred --CCCCCCHHHHHHHHHHHHHHhC---CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHH
Q 017731 104 --KKTEYTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (367)
Q Consensus 104 --~~~~~~~~~~~~dl~~~l~~~~---~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (367)
.-.....+|.++-+.-+.++.| .++|.+.|||+||+++++...++|+.++..|.-+|.. .+
T Consensus 699 k~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT---------~W----- 764 (867)
T KOG2281|consen 699 KKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT---------DW----- 764 (867)
T ss_pred hhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce---------ee-----
Confidence 1123467888998888888774 4689999999999999999999999887777655441 00
Q ss_pred HHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccccccchhhhhhccccChHHHHHhH
Q 017731 179 AIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNYGFDGQIHACWMHKMTQKDIQTIR 258 (367)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (367)
..+...+.+++++-.......+.. .......+.+.
T Consensus 765 -------------------~~YDTgYTERYMg~P~~nE~gY~a--------------------------gSV~~~Veklp 799 (867)
T KOG2281|consen 765 -------------------RLYDTGYTERYMGYPDNNEHGYGA--------------------------GSVAGHVEKLP 799 (867)
T ss_pred -------------------eeecccchhhhcCCCccchhcccc--------------------------hhHHHHHhhCC
Confidence 112223333433332111111000 00011123344
Q ss_pred hcCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCcccc-cChHHHHHHHHHHHhh
Q 017731 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSH-ERTEEVNQALIDLIKA 320 (367)
Q Consensus 259 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~-e~p~~~~~~i~~fl~~ 320 (367)
.-....+++||--|.-+...+...+...+ .+.-+++++|. .|.+-- |..+-....|..||++
T Consensus 800 depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 800 DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred CCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 44456899999999999888887777766 34568999998 997754 3445566778888865
No 139
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.76 E-value=1.1e-07 Score=81.55 Aligned_cols=121 Identities=16% Similarity=0.092 Sum_probs=69.1
Q ss_pred CCcEEEEEEecC-------CC-CeEEEEcCCCCCccchHHh-HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC
Q 017731 23 NGIKIFYRTYGR-------GP-TKVILITGLAGTHDAWGPQ-LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (367)
Q Consensus 23 ~g~~l~~~~~g~-------~~-p~vv~lHG~~~~~~~~~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (367)
-|.++.|+-+-+ .- |.+||+||.|..+..-... ...+.. .+-..-+-++-|+++-+
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~ga---------------iawa~pedqcfVlAPQy 234 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGA---------------IAWAGPEDQCFVLAPQY 234 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccc---------------eeeecccCceEEEcccc
Confidence 466777776532 22 7899999999877543322 221111 00001112234444431
Q ss_pred -CCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 94 -RGMGRSSVPVKKTEYTTKIMAKDVI-ALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 94 -~G~G~S~~~~~~~~~~~~~~~~dl~-~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
+=+-.++.. ...-....++-+. .+.++.++ .+|+++|.|+||+.++.++.++|+.+.+.+++++.
T Consensus 235 ~~if~d~e~~---t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 235 NPIFADSEEK---TLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred cccccccccc---cchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 111112111 1112333344444 23334444 58999999999999999999999999999999975
No 140
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.75 E-value=1.2e-07 Score=84.55 Aligned_cols=59 Identities=20% Similarity=0.220 Sum_probs=41.9
Q ss_pred cCccEEEEeecCCccCcHHHHHHHHHHh---c-CCcEEEEcCC-CCcccc-cChHHHHHHHHHHH
Q 017731 260 AGFLVSVIHGRHDVIAQICYARRLAEKL---Y-PVARMIDLPG-GHLVSH-ERTEEVNQALIDLI 318 (367)
Q Consensus 260 i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~-~~~~~~~~~g-gH~~~~-e~p~~~~~~i~~fl 318 (367)
.+.|+++.+|..|.++|+...+.+.+.+ . .+.+++.+++ +|.... .......++|.+-+
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 3689999999999999999988888776 3 3567788887 997543 22333334444433
No 141
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.74 E-value=1.5e-06 Score=78.35 Aligned_cols=104 Identities=14% Similarity=0.037 Sum_probs=76.3
Q ss_pred CCCeEEEEcCCCC-----CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCC
Q 017731 35 GPTKVILITGLAG-----THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYT 109 (367)
Q Consensus 35 ~~p~vv~lHG~~~-----~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~ 109 (367)
..|.||++||.|. ....|..+...++.. .+.-|+++|+|=--+.. ....
T Consensus 89 ~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~---------------------~~~vvvSVdYRLAPEh~-----~Pa~ 142 (336)
T KOG1515|consen 89 KLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE---------------------LNCVVVSVDYRLAPEHP-----FPAA 142 (336)
T ss_pred CceEEEEEeCCccEeCCCCCchhHHHHHHHHHH---------------------cCeEEEecCcccCCCCC-----CCcc
Confidence 3478999999874 245688888888653 48899999998332222 3445
Q ss_pred HHHHHHHHHHHHHH------hCCceEEEEEeChhHHHHHHHHHhC------CcceeEEEEeccCCCC
Q 017731 110 TKIMAKDVIALMDH------LGWKQAHVFGHSMGAMIACKLAAMV------PERVLSLALLNVTGGG 164 (367)
Q Consensus 110 ~~~~~~dl~~~l~~------~~~~~v~lvGhS~Gg~~a~~~a~~~------p~~v~~lvl~~~~~~~ 164 (367)
++|-.+.+..+.++ .+.++++|+|-|.||.+|..+|.+. +-++++.|++.|...+
T Consensus 143 y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 67767766666664 2556899999999999999988752 3579999999987543
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.68 E-value=3e-08 Score=89.77 Aligned_cols=111 Identities=21% Similarity=0.354 Sum_probs=64.9
Q ss_pred CCCeEEEEcCCCCCc--cch-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHH
Q 017731 35 GPTKVILITGLAGTH--DAW-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~--~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (367)
.+|++|++|||.++. ..| ..+...+.... ..++.|+++|+...- +. .-........
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-------------------~~d~NVI~VDWs~~a-~~-~Y~~a~~n~~ 128 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKD-------------------TGDYNVIVVDWSRGA-SN-NYPQAVANTR 128 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC---------------------S-EEEEEEE-HHHH-SS--HHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhc-------------------cCCceEEEEcchhhc-cc-cccchhhhHH
Confidence 568999999999877 344 45555554410 028999999995321 11 0000001123
Q ss_pred HHHHHHHHHHHH----h--CCceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccCCCCCC
Q 017731 112 IMAKDVIALMDH----L--GWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQ 166 (367)
Q Consensus 112 ~~~~dl~~~l~~----~--~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~ 166 (367)
...+.+..++.. . ..++++|||||+||.+|-.++..... +|.+++.++|+.+.+.
T Consensus 129 ~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp HHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred HHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 333334343333 2 34689999999999999999998877 8999999999876554
No 143
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.65 E-value=1.4e-06 Score=73.02 Aligned_cols=96 Identities=14% Similarity=0.170 Sum_probs=61.9
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE-EeeCCCCCCCCCCCCCCCCCCHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV-CAFDNRGMGRSSVPVKKTEYTTKIM 113 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v-i~~D~~G~G~S~~~~~~~~~~~~~~ 113 (367)
++..||+..|+|++...+..+.. .+ ++.| +++|+|.. +.+.
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~~--~~-----------------------~~D~l~~yDYr~l------------~~d~- 51 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLIL--PE-----------------------NYDVLICYDYRDL------------DFDF- 51 (213)
T ss_pred CCeEEEEEecCCCChHHhhhccC--CC-----------------------CccEEEEecCccc------------cccc-
Confidence 44589999999999987765531 22 4444 55688722 1110
Q ss_pred HHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHH
Q 017731 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (367)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (367)
| ..+.+.+.|||+|||-.+|..+.... .+...|.++++..+....-.++......
T Consensus 52 --~------~~~y~~i~lvAWSmGVw~A~~~l~~~--~~~~aiAINGT~~Pid~~~GIpp~iF~~ 106 (213)
T PF04301_consen 52 --D------LSGYREIYLVAWSMGVWAANRVLQGI--PFKRAIAINGTPYPIDDEYGIPPAIFAG 106 (213)
T ss_pred --c------cccCceEEEEEEeHHHHHHHHHhccC--CcceeEEEECCCCCcCCCCCCCHHHHHH
Confidence 1 12457899999999999998876654 3778888888865544444444444433
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.63 E-value=8.4e-08 Score=81.19 Aligned_cols=87 Identities=24% Similarity=0.272 Sum_probs=53.2
Q ss_pred eEEEEcCCCC-CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeE---EEeeCCCCCCCCCCCCCC--CCCCHH
Q 017731 38 KVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKK--TEYTTK 111 (367)
Q Consensus 38 ~vv~lHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~--~~~~~~ 111 (367)
||||+||.++ ....|..+.+.|.+ +||. |+++++-........... ..-+..
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~----------------------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~ 60 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKA----------------------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAK 60 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHH----------------------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHH
T ss_pred CEEEECCCCcchhhCHHHHHHHHHH----------------------cCCCcceeEeccCCCCCCCCcccccccchhhHH
Confidence 5999999998 56889999999998 7999 799998433321111100 001123
Q ss_pred HHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh
Q 017731 112 IMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
++.+-|.+++++-|. +|.||||||||.++-.+..-
T Consensus 61 ~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 445555555666688 99999999999999888764
No 145
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.58 E-value=4.3e-06 Score=77.50 Aligned_cols=73 Identities=21% Similarity=0.189 Sum_probs=54.8
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEec
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (367)
|+.|+.+.+. ..+. ..-++++.+.....+++.+ +..+.+|+|.|.||+.++.+|+.+|+.+.-+|+-+
T Consensus 100 GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaG 172 (581)
T PF11339_consen 100 GHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAG 172 (581)
T ss_pred CCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecC
Confidence 8888887653 1122 2447888777777666654 22489999999999999999999999998888877
Q ss_pred cCCCC
Q 017731 160 VTGGG 164 (367)
Q Consensus 160 ~~~~~ 164 (367)
++...
T Consensus 173 aPlsy 177 (581)
T PF11339_consen 173 APLSY 177 (581)
T ss_pred CCccc
Confidence 66543
No 146
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.54 E-value=5.2e-06 Score=73.29 Aligned_cols=104 Identities=22% Similarity=0.308 Sum_probs=74.1
Q ss_pred ccccCCcEEEEEEec----CCCCeEEEEcCCCCCccch------HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 19 ALNDNGIKIFYRTYG----RGPTKVILITGLAGTHDAW------GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g----~~~p~vv~lHG~~~~~~~~------~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
.+..|+++|--.... +....||+.-|.++.-+.. ...+..+++. .+.+|
T Consensus 116 ~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~---------------------~~aNv 174 (365)
T PF05677_consen 116 PIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE---------------------LGANV 174 (365)
T ss_pred EEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH---------------------cCCcE
Confidence 455577766543332 2334899999988766551 1334444442 48899
Q ss_pred EeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CC--ceEEEEEeChhHHHHHHHHHhC
Q 017731 89 CAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL-----GW--KQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~-----~~--~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.+++||.|.|.... +.+++++|-.+.++.+ |+ +.+++.|||+||.++..++..+
T Consensus 175 l~fNYpGVg~S~G~~-----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 175 LVFNYPGVGSSTGPP-----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred EEECCCccccCCCCC-----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 999999999998665 5688888887777766 22 5799999999999999876665
No 147
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=2.7e-06 Score=71.81 Aligned_cols=210 Identities=17% Similarity=0.189 Sum_probs=113.8
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHHH------HhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV--------IALMD------HLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl--------~~~l~------~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
++...+.+.-|-+|....+.. ....-+.+.|+ .+... ..|..+..++|-||||.+|-.....++
T Consensus 140 ~~i~tmvle~pfYgqr~p~~q--~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q 217 (371)
T KOG1551|consen 140 REIATMVLEKPFYGQRVPEEQ--IIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQ 217 (371)
T ss_pred hcchheeeecccccccCCHHH--HHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCC
Confidence 588888899998988765442 11111222222 11111 236678999999999999999999888
Q ss_pred cceeEEEEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhc
Q 017731 150 ERVLSLALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISAT 229 (367)
Q Consensus 150 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (367)
..|+-+-++++.......+..+.........++.......... .....+.+....-............+.+...
T Consensus 218 ~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~----~r~p~Q~~~~~~~~~srn~~~E~~~~Mr~vm-- 291 (371)
T KOG1551|consen 218 KPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYT----SRNPAQSYHLLSKEQSRNSRKESLIFMRGVM-- 291 (371)
T ss_pred CCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhh----hhCchhhHHHHHHHhhhcchHHHHHHHHHHH--
Confidence 7777777777653222111111111111111111110000000 0001111111110000000011111111110
Q ss_pred CccccccccchhhhhhccccChHHHHHhHhcCcc-----EEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCCCCc-cc
Q 017731 230 GMQSNYGFDGQIHACWMHKMTQKDIQTIRSAGFL-----VSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPGGHL-VS 303 (367)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-----vlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~ggH~-~~ 303 (367)
+....+....+| +.++.+++|..+|......+.+.+ |++++..++|||. .+
T Consensus 292 ----------------------d~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~W-Pg~eVr~~egGHVsay 348 (371)
T KOG1551|consen 292 ----------------------DECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIW-PGCEVRYLEGGHVSAY 348 (371)
T ss_pred ----------------------HhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhC-CCCEEEEeecCceeee
Confidence 111122222233 567889999999998888999987 9999999999995 45
Q ss_pred ccChHHHHHHHHHHHhhhccC
Q 017731 304 HERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 304 ~e~p~~~~~~i~~fl~~~~~~ 324 (367)
+-+-+.+.+.|.+-|.+..++
T Consensus 349 l~k~dlfRR~I~d~L~R~~ke 369 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRLDKE 369 (371)
T ss_pred ehhchHHHHHHHHHHHhhhhc
Confidence 668889999999999887643
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.54 E-value=4.4e-07 Score=79.37 Aligned_cols=75 Identities=21% Similarity=0.260 Sum_probs=56.6
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEecc
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV-IALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl-~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (367)
.||.|+.|++||++.|...+. ......-++.+ .-.++.+|. +.|++.|||.||..+..+|..||+ |+++|+-+.
T Consensus 267 lgYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 267 LGYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred hCceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecc
Confidence 499999999999999987653 22222223333 334556655 579999999999999999999996 899888765
Q ss_pred C
Q 017731 161 T 161 (367)
Q Consensus 161 ~ 161 (367)
.
T Consensus 344 F 344 (517)
T KOG1553|consen 344 F 344 (517)
T ss_pred h
Confidence 3
No 149
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.49 E-value=1.3e-06 Score=81.67 Aligned_cols=131 Identities=18% Similarity=0.209 Sum_probs=89.9
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------HhCCceEEEEEeChhHHHHHHHHHhCC-cceeEE
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMD--------HLGWKQAHVFGHSMGAMIACKLAAMVP-ERVLSL 155 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~--------~~~~~~v~lvGhS~Gg~~a~~~a~~~p-~~v~~l 155 (367)
-..|.++|++.--. ..++..-++.+..+.. ++...+++|+|.|||+.++++.+.... ..|+++
T Consensus 208 vvev~tfdl~n~ig--------G~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~v 279 (784)
T KOG3253|consen 208 VVEVPTFDLNNPIG--------GANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAV 279 (784)
T ss_pred eeeeccccccCCCC--------CcchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEE
Confidence 56777788763211 1345555555555544 234468999999999999998877643 349999
Q ss_pred EEeccCCCCCCCCCccchhhHHHHHHHhhccChhhhhhcccCccccHHHHHHHhCCCchhhHhHHHHHHhhhhcCccccc
Q 017731 156 ALLNVTGGGFQCCPKLDLQTLSIAIRFFRAKTPEKRAAVDLDTHYSQEYLEEYVGSSTRRAILYQEYVKGISATGMQSNY 235 (367)
Q Consensus 156 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (367)
|+++=+.... + .+.
T Consensus 280 VCigypl~~v------d--------------gpr---------------------------------------------- 293 (784)
T KOG3253|consen 280 VCIGYPLDTV------D--------------GPR---------------------------------------------- 293 (784)
T ss_pred EEecccccCC------C--------------ccc----------------------------------------------
Confidence 9988431000 0 000
Q ss_pred cccchhhhhhccccChHHHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccc
Q 017731 236 GFDGQIHACWMHKMTQKDIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH 304 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~ 304 (367)
...+ +.+-.++.|+||+.|.+|..+++...+.+.++.....+++++++ +|.+-.
T Consensus 294 ------------girD---E~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 294 ------------GIRD---EALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAI 348 (784)
T ss_pred ------------CCcc---hhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccC
Confidence 0011 34556678999999999999999999999999877889999998 997654
No 150
>PLN02606 palmitoyl-protein thioesterase
Probab=98.47 E-value=4.1e-05 Score=67.26 Aligned_cols=107 Identities=14% Similarity=0.157 Sum_probs=67.9
Q ss_pred CeEEEEcCCC--CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 37 TKVILITGLA--GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 37 p~vv~lHG~~--~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.+||+.||+| .+...+..+.+.+.+. .++.+..+- .|-+.. . ..-..+.+.+
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~---------------------~~~pg~~v~-ig~~~~---~-s~~~~~~~Qv 80 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINH---------------------SGYPGTCVE-IGNGVQ---D-SLFMPLRQQA 80 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhC---------------------CCCCeEEEE-ECCCcc---c-ccccCHHHHH
Confidence 3699999999 4555677777766520 144443333 222221 1 0122455556
Q ss_pred HHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccCCCCCCCCC
Q 017731 115 KDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCP 169 (367)
Q Consensus 115 ~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 169 (367)
+.+.+.+..... +-++++|+|.||.++-.++.+.|+ .|+.+|-++++-.+....|
T Consensus 81 ~~vce~l~~~~~L~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv~g~p 139 (306)
T PLN02606 81 SIACEKIKQMKELSEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIP 139 (306)
T ss_pred HHHHHHHhcchhhcCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCcccCc
Confidence 655555543211 359999999999999999999877 5999999998765544433
No 151
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.41 E-value=1.7e-05 Score=74.22 Aligned_cols=51 Identities=16% Similarity=0.191 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHh-----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 111 KIMAKDVIALMDHL-----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 111 ~~~~~dl~~~l~~~-----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
+.+++++.-.+++. +.++.+|+|+||||..++.++.++|+++.+++.+++.
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 33456666666653 3356899999999999999999999999999999976
No 152
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.37 E-value=5.1e-05 Score=71.78 Aligned_cols=132 Identities=17% Similarity=0.132 Sum_probs=79.5
Q ss_pred CcEEEEEEec-----CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCC-CC-chh-hhcccccCCCCCCCeEEEeeCCC-
Q 017731 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPN-DD-DET-ILQDSVESGDGGAGIEVCAFDNR- 94 (367)
Q Consensus 24 g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~-~~-~~~-~~~~~~~~~~~~~g~~vi~~D~~- 94 (367)
+.+++|.-.. +..|.||++.|.++++..+..+.+ ... ++-. +. -++ ---.+| .+..+++-+|.|
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP-~~~~~~~~~~l~~n~~sW-----~~~an~l~iD~Pv 95 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGP-FRINPDGPYTLEDNPYSW-----NKFANLLFIDQPV 95 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSS-EEEETTSTSEEEE-TT-G-----GGTSEEEEE--ST
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCc-eEEeeccccccccccccc-----ccccceEEEeecC
Confidence 6678877654 356899999999999887743322 111 0000 00 000 000000 024689999955
Q ss_pred CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEeChhHHHHHHHHHh----C------CcceeEEE
Q 017731 95 GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V------PERVLSLA 156 (367)
Q Consensus 95 G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~-------~~~~v~lvGhS~Gg~~a~~~a~~----~------p~~v~~lv 156 (367)
|.|.|...... ...+.++.++++.+++... ...+++|.|-|+||..+-.+|.. . +-.++|++
T Consensus 96 GtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 96 GTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp TSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred ceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 99999876543 2457888888888888754 44589999999999988777754 2 23588999
Q ss_pred EeccCC
Q 017731 157 LLNVTG 162 (367)
Q Consensus 157 l~~~~~ 162 (367)
+.++..
T Consensus 176 IGng~~ 181 (415)
T PF00450_consen 176 IGNGWI 181 (415)
T ss_dssp EESE-S
T ss_pred ecCccc
Confidence 998864
No 153
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.36 E-value=1.1e-05 Score=69.89 Aligned_cols=125 Identities=25% Similarity=0.284 Sum_probs=84.7
Q ss_pred ccccccCCcEEEEEEec-----CCCCeEEEEcCCCCCccchHHhH--HhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 17 DAALNDNGIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 17 ~~~~~~~g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
...+..+|.+..|+.+- +++|.||++||-+++...+.... +.|++. .||-|+
T Consensus 37 ~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~---------------------~gFlV~ 95 (312)
T COG3509 37 VASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR---------------------EGFLVA 95 (312)
T ss_pred ccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc---------------------cCcEEE
Confidence 34556677777776653 35578999999999987666554 666652 599999
Q ss_pred eeCC-C------CCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHhCCcceeEEEEe
Q 017731 90 AFDN-R------GMGRSSVPVK--KTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALL 158 (367)
Q Consensus 90 ~~D~-~------G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~ 158 (367)
.+|- + +.|.+..+.+ ...-+...+.+-+..++.+.+++ +|++.|.|-||.++..++..+|+.+.++..+
T Consensus 96 yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~V 175 (312)
T COG3509 96 YPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPV 175 (312)
T ss_pred CcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeee
Confidence 9962 1 2222211211 01112333334444445555665 7999999999999999999999999999999
Q ss_pred ccCC
Q 017731 159 NVTG 162 (367)
Q Consensus 159 ~~~~ 162 (367)
++..
T Consensus 176 Ag~~ 179 (312)
T COG3509 176 AGLL 179 (312)
T ss_pred eccc
Confidence 8864
No 154
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.35 E-value=8.5e-05 Score=65.34 Aligned_cols=107 Identities=14% Similarity=0.149 Sum_probs=68.0
Q ss_pred eEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHH
Q 017731 38 KVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAK 115 (367)
Q Consensus 38 ~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 115 (367)
++|+.||+|.+.. ....+.+.+.+. .|..+.++.. |.+.. ......+.+.++
T Consensus 27 P~ViwHG~GD~c~~~g~~~~~~l~~~~---------------------~g~~~~~i~i---g~~~~--~s~~~~~~~Qve 80 (314)
T PLN02633 27 PFIMLHGIGTQCSDATNANFTQLLTNL---------------------SGSPGFCLEI---GNGVG--DSWLMPLTQQAE 80 (314)
T ss_pred CeEEecCCCcccCCchHHHHHHHHHhC---------------------CCCceEEEEE---CCCcc--ccceeCHHHHHH
Confidence 5999999998764 333444444220 2555555543 33211 112335566666
Q ss_pred HHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccCCCCCCCCCc
Q 017731 116 DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 116 dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~ 170 (367)
.+.+.+..... +-++++|+|.||.++-.++.+.|+ .|+.+|.++++-.+....|.
T Consensus 81 ~vce~l~~~~~l~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~Gv~g~p~ 139 (314)
T PLN02633 81 IACEKVKQMKELSQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAGISSLPR 139 (314)
T ss_pred HHHHHHhhchhhhCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCCeeCCCC
Confidence 66655544211 349999999999999999999987 59999999987655444333
No 155
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.35 E-value=3.3e-06 Score=73.16 Aligned_cols=102 Identities=19% Similarity=0.283 Sum_probs=68.5
Q ss_pred CCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCC----C---CC----
Q 017731 36 PTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV----P---VK---- 104 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~----~---~~---- 104 (367)
-|.+||-||+|++...|..+.-.|+. +||-|.+++.|-+-.+.. + ..
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAS----------------------hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lve 175 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLAS----------------------HGFVVAAVEHRDRSACWTYVLKEKHENEPLVE 175 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhh----------------------CceEEEEeecccCcceeEEEecccccCCcccc
Confidence 37899999999999999999999999 799999999986543321 0 00
Q ss_pred ----------CCC-C--C---HHHHHHHHH---HHHHHh------------------------CCceEEEEEeChhHHHH
Q 017731 105 ----------KTE-Y--T---TKIMAKDVI---ALMDHL------------------------GWKQAHVFGHSMGAMIA 141 (367)
Q Consensus 105 ----------~~~-~--~---~~~~~~dl~---~~l~~~------------------------~~~~v~lvGhS~Gg~~a 141 (367)
... + . ...-++... .+++.+ ...++.++|||+||+.+
T Consensus 176 q~~~ir~v~~~ekef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~ 255 (399)
T KOG3847|consen 176 QWIKIRLVEANEKEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATS 255 (399)
T ss_pred cceEeeeeccCceeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhh
Confidence 000 0 0 011111111 122211 22368899999999999
Q ss_pred HHHHHhCCcceeEEEEecc
Q 017731 142 CKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 142 ~~~a~~~p~~v~~lvl~~~ 160 (367)
+.....+. .++..|++++
T Consensus 256 i~~ss~~t-~FrcaI~lD~ 273 (399)
T KOG3847|consen 256 IASSSSHT-DFRCAIALDA 273 (399)
T ss_pred hhhhcccc-ceeeeeeeee
Confidence 98887664 6888888885
No 156
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.34 E-value=9.2e-06 Score=69.48 Aligned_cols=90 Identities=14% Similarity=0.213 Sum_probs=50.2
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC-CCCCCCHHHHHH
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV-KKTEYTTKIMAK 115 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~-~~~~~~~~~~~~ 115 (367)
-.||++||+.++...|..+...+.... ..+.-..+...+........ ..-....+.+++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~--------------------~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~ 64 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIP--------------------EDLPNARIVVLGYSNNEFKTFDGIDVCGERLAE 64 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhh--------------------hhcchhhhhhhcccccccccchhhHHHHHHHHH
Confidence 369999999999999988777766510 01111111111111111000 001112334455
Q ss_pred HHHHHHHHhCC--ceEEEEEeChhHHHHHHHHH
Q 017731 116 DVIALMDHLGW--KQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 116 dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+|.+.++.... .++.+|||||||.++-.+..
T Consensus 65 eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 65 EILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 55555554444 38999999999999876654
No 157
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.32 E-value=2.2e-06 Score=74.02 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
++..+||+||+..+.+.-..-...+...+. ..-.++.+.||..|.-..-.. ...+...-.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-------------------~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~ 76 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLG-------------------FPGVVILFSWPSDGSLLGYFY-DRESARFSG 76 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-------------------CCceEEEEEcCCCCChhhhhh-hhhhHHHHH
Confidence 455899999999886543222222222100 122899999998876322111 111333334
Q ss_pred HHHHHHHHH----hCCceEEEEEeChhHHHHHHHHHh----CC-----cceeEEEEeccC
Q 017731 115 KDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAM----VP-----ERVLSLALLNVT 161 (367)
Q Consensus 115 ~dl~~~l~~----~~~~~v~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lvl~~~~ 161 (367)
..+..++.. .+.++|+|++||||+.+.+..... .+ .++..+++++|-
T Consensus 77 ~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 77 PALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred HHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 445555544 366799999999999999987654 11 267889999865
No 158
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.29 E-value=3e-06 Score=77.37 Aligned_cols=101 Identities=25% Similarity=0.309 Sum_probs=81.7
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeE---EEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE---VCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
+++++||++.+...|.++...+.. .|+. ++++++++. ....+ ....-+++.
T Consensus 61 pivlVhG~~~~~~~~~~~~~~~~~----------------------~g~~~~~~~~~~~~~~-~~~~~---~~~~~~ql~ 114 (336)
T COG1075 61 PIVLVHGLGGGYGNFLPLDYRLAI----------------------LGWLTNGVYAFELSGG-DGTYS---LAVRGEQLF 114 (336)
T ss_pred eEEEEccCcCCcchhhhhhhhhcc----------------------hHHHhccccccccccc-CCCcc---ccccHHHHH
Confidence 699999998888889888888777 4777 888888865 11111 234567777
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCC--cceeEEEEeccCCCC
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVTGGG 164 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~~~~ 164 (367)
..+.+++...+.+++.++||||||..+..++...+ .+|+.++.++++-.+
T Consensus 115 ~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 115 AYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred HHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 78888888889899999999999999999988887 799999999987543
No 159
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.21 E-value=9.8e-05 Score=64.31 Aligned_cols=60 Identities=10% Similarity=-0.008 Sum_probs=48.8
Q ss_pred hcCccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEcCC-CCccccc-ChHHHHHHHHHHH
Q 017731 259 SAGFLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDLPG-GHLVSHE-RTEEVNQALIDLI 318 (367)
Q Consensus 259 ~i~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~~g-gH~~~~e-~p~~~~~~i~~fl 318 (367)
...+|-|++++++|.+++.+..++.++.. .-.++...+++ +|..++. +|++..+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 34589999999999999999888887765 22466777787 9988865 8999999999885
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.19 E-value=0.0002 Score=64.60 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=66.7
Q ss_pred CeEEEEcCCCCCcc---chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCC--CC----------
Q 017731 37 TKVILITGLAGTHD---AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS--SV---------- 101 (367)
Q Consensus 37 p~vv~lHG~~~~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S--~~---------- 101 (367)
-.||++||.+.+.+ ...++-..|.+ .|+..+++.+|.--.. ..
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~----------------------~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~ 145 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPD----------------------HGWATLSITLPDPAPPASPNRATEAEEVPS 145 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhh----------------------cCceEEEecCCCcccccCCccCCCCCCCCC
Confidence 37999999998874 34556666666 7999999988861100 00
Q ss_pred -CCCC--CC------------CCH----HHHHHHHH---HHHHHhCCceEEEEEeChhHHHHHHHHHhCCc-ceeEEEEe
Q 017731 102 -PVKK--TE------------YTT----KIMAKDVI---ALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE-RVLSLALL 158 (367)
Q Consensus 102 -~~~~--~~------------~~~----~~~~~dl~---~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~ 158 (367)
.... .. -.. +.+..-|. ++....+.++++|+||+.|+.+++.+....+. .++++|++
T Consensus 146 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I 225 (310)
T PF12048_consen 146 AGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLI 225 (310)
T ss_pred CCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEE
Confidence 0000 00 001 12222222 23334465679999999999999999988764 58999999
Q ss_pred ccC
Q 017731 159 NVT 161 (367)
Q Consensus 159 ~~~ 161 (367)
++.
T Consensus 226 ~a~ 228 (310)
T PF12048_consen 226 NAY 228 (310)
T ss_pred eCC
Confidence 985
No 161
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.17 E-value=5.8e-05 Score=62.35 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=72.3
Q ss_pred CeEEEEcCCCCCc---cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 017731 37 TKVILITGLAGTH---DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (367)
Q Consensus 37 p~vv~lHG~~~~~---~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (367)
..|||+-|++..- ..-.++...|.+ .++..+-+-++.+ .......++++-
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde----------------------~~wslVq~q~~Ss-----y~G~Gt~slk~D 89 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDE----------------------NSWSLVQPQLRSS-----YNGYGTFSLKDD 89 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhh----------------------ccceeeeeecccc-----cccccccccccc
Confidence 4689999988754 233567777777 6999998877622 111123477888
Q ss_pred HHHHHHHHHHhCC----ceEEEEEeChhHHHHHHHHHh--CCcceeEEEEeccCC
Q 017731 114 AKDVIALMDHLGW----KQAHVFGHSMGAMIACKLAAM--VPERVLSLALLNVTG 162 (367)
Q Consensus 114 ~~dl~~~l~~~~~----~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~~~ 162 (367)
++|+..++++++. ..++|+|||.|+.=.+.|... .|..+.+.|+.+|..
T Consensus 90 ~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 90 VEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred HHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 9999999998754 379999999999999888732 355688888888764
No 162
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.03 E-value=0.00014 Score=69.22 Aligned_cols=128 Identities=17% Similarity=0.152 Sum_probs=84.5
Q ss_pred cccccCCcEEEEEEecC----CCCeEEEEcCCCCCccc--h---HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEE
Q 017731 18 AALNDNGIKIFYRTYGR----GPTKVILITGLAGTHDA--W---GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEV 88 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g~----~~p~vv~lHG~~~~~~~--~---~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 88 (367)
.+..-||++|+-..+-+ ..|+++..+-++-.... + ....+. - ...+.+||.|
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~----------------~---~~~aa~GYav 83 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQ----------------P---AWFAAQGYAV 83 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccc----------------c---ceeecCceEE
Confidence 45566999999776632 34677777722222221 1 111110 0 1233379999
Q ss_pred EeeCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCC
Q 017731 89 CAFDNRGMGRSSVPVKKTEYT-TKIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGF 165 (367)
Q Consensus 89 i~~D~~G~G~S~~~~~~~~~~-~~~~~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~ 165 (367)
+..|.||.|.|+.... ..++ -.+-.-|+++++.+... .+|..+|.|++|...+.+|+..|..++.++...+....+
T Consensus 84 V~qDvRG~~~SeG~~~-~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 84 VNQDVRGRGGSEGVFD-PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred EEecccccccCCcccc-eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 9999999999997654 2223 22334466666666533 589999999999999999999888888888888765433
No 163
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.02 E-value=3.8e-05 Score=64.78 Aligned_cols=107 Identities=20% Similarity=0.152 Sum_probs=73.4
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC----CCCCCCCC---------
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM----GRSSVPVK--------- 104 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~----G~S~~~~~--------- 104 (367)
+.||+||.+++......++..|...+++.++ --+..+|--|. |.=+....
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e-----------------~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe 109 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTE-----------------SLTMTVDVDGSLKVTGKISKDAKNPIIEFGFE 109 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhccccccc-----------------ceEEEEcCCCcEEEeeeecccCCCCeEEEEEe
Confidence 6899999999999999999999885433222 23445555441 11111110
Q ss_pred CCCCCHHHHHHHHHHHHHH----hCCceEEEEEeChhHHHHHHHHHhCCc-----ceeEEEEeccC
Q 017731 105 KTEYTTKIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVT 161 (367)
Q Consensus 105 ~~~~~~~~~~~dl~~~l~~----~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~ 161 (367)
....+..++...+..++.. .++.++.+|||||||.-...|+..+.. .++++|.++++
T Consensus 110 ~n~~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 110 DNTASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred cCcCchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 1233455666666666654 477899999999999999999987532 48999999986
No 164
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.00 E-value=0.00019 Score=64.09 Aligned_cols=67 Identities=18% Similarity=0.304 Sum_probs=51.7
Q ss_pred HHhHhcC-ccEEEEeecCCccCcHHHHHHHHHHhcC-CcEEEEcCC-CCcccccChH---HHHHHHHHHHhhh
Q 017731 255 QTIRSAG-FLVSVIHGRHDVIAQICYARRLAEKLYP-VARMIDLPG-GHLVSHERTE---EVNQALIDLIKAS 321 (367)
Q Consensus 255 ~~l~~i~-~Pvlii~G~~D~~~p~~~~~~~~~~~~~-~~~~~~~~g-gH~~~~e~p~---~~~~~i~~fl~~~ 321 (367)
..+..+. +|+++++|.+|.++|...+..+.+.... ..+...+++ +|........ +..+.+.+|+.+.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 4445555 7999999999999999999999888744 456777776 9988865443 6778888888764
No 165
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.95 E-value=6.7e-05 Score=61.52 Aligned_cols=106 Identities=24% Similarity=0.327 Sum_probs=67.9
Q ss_pred CCeEEEEcCCCCCccchH--HhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC--CCC---CCCCCCCC----
Q 017731 36 PTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN--RGM---GRSSVPVK---- 104 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~---G~S~~~~~---- 104 (367)
-|++.++-|+..+.+.|- .-.+..+.. .|+.|+.+|- ||. |.++..+-
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~---------------------hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASK---------------------HGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhh---------------------cCeEEECCCCCCCccccCCCcccccccCCc
Confidence 478999999999887652 222333321 6999999984 443 22221110
Q ss_pred -----------CCCCCH-HHHHHHHHHHHHH----hCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 105 -----------KTEYTT-KIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 105 -----------~~~~~~-~~~~~dl~~~l~~----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
...|.+ +-.++++.+++.. ++..++.|.||||||.=|+..+.+.|.+.+++-..+|..
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~ 176 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPIC 176 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccccc
Confidence 011122 2233444455442 233578999999999999999999999999998888864
No 166
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.92 E-value=2.6e-05 Score=68.39 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHh-CCc--eEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 112 IMAKDVIALMDHL-GWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 112 ~~~~dl~~~l~~~-~~~--~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
-+.++|...++.. ... +..|+|+||||..|+.++.++|+.+.+++++++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 3455666666643 322 2799999999999999999999999999999975
No 167
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.85 E-value=0.0004 Score=62.69 Aligned_cols=84 Identities=24% Similarity=0.241 Sum_probs=62.8
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
.-||+.|=|+-.+.=..+...|.+ +|+.|+.+|-.=+-.| ..+.++.++|+
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~----------------------~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl 312 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQK----------------------QGVPVVGVDSLRYFWS-------ERTPEQIAADL 312 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHH----------------------CCCceeeeehhhhhhc-------cCCHHHHHHHH
Confidence 456666766655555678888888 7999999985433333 33678889999
Q ss_pred HHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCc
Q 017731 118 IALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 118 ~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
..++++. +.+++.|+|+|+|+-+.-....+.|.
T Consensus 313 ~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 313 SRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 8888765 56789999999999887776666553
No 168
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.85 E-value=5.6e-05 Score=56.32 Aligned_cols=61 Identities=28% Similarity=0.391 Sum_probs=54.4
Q ss_pred CccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 261 GFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 261 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
..|+|++.++.|++.|.+.++.+++.+ ++++++.+++ ||..+...-.-+.+.+.+||..-+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l-~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~G~ 95 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARL-PGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLDGT 95 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHC-CCceEEEEeccCcceecCCChHHHHHHHHHHHcCC
Confidence 489999999999999999999999998 7799999998 999987556678899999998654
No 169
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.0016 Score=55.75 Aligned_cols=105 Identities=17% Similarity=0.191 Sum_probs=72.7
Q ss_pred eEEEEcCCCCCccc--hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC--CCCCCCCCCCCCHHHH
Q 017731 38 KVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG--RSSVPVKKTEYTTKIM 113 (367)
Q Consensus 38 ~vv~lHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G--~S~~~~~~~~~~~~~~ 113 (367)
++|++||++.+... +..+.+.+.+. .|..|.+.|. |-| .| ......+.
T Consensus 25 P~ii~HGigd~c~~~~~~~~~q~l~~~---------------------~g~~v~~lei-g~g~~~s------~l~pl~~Q 76 (296)
T KOG2541|consen 25 PVIVWHGIGDSCSSLSMANLTQLLEEL---------------------PGSPVYCLEI-GDGIKDS------SLMPLWEQ 76 (296)
T ss_pred CEEEEeccCcccccchHHHHHHHHHhC---------------------CCCeeEEEEe-cCCcchh------hhccHHHH
Confidence 59999999988765 66666666652 4889999986 555 22 12234555
Q ss_pred HHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCc-ceeEEEEeccCCCCCCCCCc
Q 017731 114 AKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 114 ~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (367)
++.+.+.+..... +-+.++|.|.||.++-.++..-++ .|..+|.++++-.+....|.
T Consensus 77 v~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG~~~~p~ 136 (296)
T KOG2541|consen 77 VDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAGIYGIPR 136 (296)
T ss_pred HHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCcCCccCCCC
Confidence 5555555443211 348999999999999999887543 58999999987655544444
No 170
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.79 E-value=0.00016 Score=67.50 Aligned_cols=82 Identities=17% Similarity=0.277 Sum_probs=56.6
Q ss_pred chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeE------EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 017731 51 AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE------VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHL 124 (367)
Q Consensus 51 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~ 124 (367)
.|..+++.|.+ .||. ..-+|+|=--. ..+++...+.+.++..
T Consensus 66 ~~~~li~~L~~----------------------~GY~~~~~l~~~pYDWR~~~~----------~~~~~~~~lk~~ie~~ 113 (389)
T PF02450_consen 66 YFAKLIENLEK----------------------LGYDRGKDLFAAPYDWRLSPA----------ERDEYFTKLKQLIEEA 113 (389)
T ss_pred hHHHHHHHHHh----------------------cCcccCCEEEEEeechhhchh----------hHHHHHHHHHHHHHHH
Confidence 78999999987 3553 22268872111 2334444555444432
Q ss_pred ---CCceEEEEEeChhHHHHHHHHHhCCc------ceeEEEEeccCCCC
Q 017731 125 ---GWKQAHVFGHSMGAMIACKLAAMVPE------RVLSLALLNVTGGG 164 (367)
Q Consensus 125 ---~~~~v~lvGhS~Gg~~a~~~a~~~p~------~v~~lvl~~~~~~~ 164 (367)
..++++|+||||||.++..+....+. .|+++|.++++..+
T Consensus 114 ~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 114 YKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 35799999999999999999887743 59999999987544
No 171
>PLN02209 serine carboxypeptidase
Probab=97.78 E-value=0.0096 Score=56.31 Aligned_cols=138 Identities=15% Similarity=0.099 Sum_probs=75.5
Q ss_pred CcEEEEEEec-----CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCC-chhhhcccccCCCCCCCeEEEeeC-CCCC
Q 017731 24 GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDD-DETILQDSVESGDGGAGIEVCAFD-NRGM 96 (367)
Q Consensus 24 g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~g~~vi~~D-~~G~ 96 (367)
+..++|.-.. +..|+|+++.|.++++..+..+. ++....-..+. ..+...-..-.-.-.+-.+++-+| ..|.
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~-e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 129 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF-ENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGS 129 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHH-hcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCC
Confidence 4556665443 24588999999999887653332 22110000000 000000000000001346899999 5599
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCceEEEEEeChhHHHHHHHHHhC----------CcceeEEEEec
Q 017731 97 GRSSVPVKKTEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMV----------PERVLSLALLN 159 (367)
Q Consensus 97 G~S~~~~~~~~~~~~~~~~dl~~~l~~~-------~~~~v~lvGhS~Gg~~a~~~a~~~----------p~~v~~lvl~~ 159 (367)
|.|.........+-++.++++.+++... ...+++|.|.|+||..+-.+|..- +-.++|+++.+
T Consensus 130 GfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 130 GFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 9986443211223334456666666542 235899999999999877776531 12477888888
Q ss_pred cCC
Q 017731 160 VTG 162 (367)
Q Consensus 160 ~~~ 162 (367)
+..
T Consensus 210 g~t 212 (437)
T PLN02209 210 PIT 212 (437)
T ss_pred ccc
Confidence 754
No 172
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.76 E-value=0.0058 Score=57.75 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=46.9
Q ss_pred CccEEEEeecCCccCcHHHHHHHHHHhc-----------------------CC-cEEEEcCC-CCcccccChHHHHHHHH
Q 017731 261 GFLVSVIHGRHDVIAQICYARRLAEKLY-----------------------PV-ARMIDLPG-GHLVSHERTEEVNQALI 315 (367)
Q Consensus 261 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~-----------------------~~-~~~~~~~g-gH~~~~e~p~~~~~~i~ 315 (367)
+++||+..|..|.+++....+.+.+.+. .+ .+++.+-+ ||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999888887776651 01 23445556 99996 59999999999
Q ss_pred HHHhh
Q 017731 316 DLIKA 320 (367)
Q Consensus 316 ~fl~~ 320 (367)
+|++.
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99965
No 173
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.72 E-value=0.00029 Score=62.95 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCCCCccc-hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCC---CCCCCCH
Q 017731 35 GPTKVILITGLAGTHDA-WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPV---KKTEYTT 110 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~---~~~~~~~ 110 (367)
++..+||+||+..+-+. -...++-.... +.....+.+.||..|.--.-. +...++-
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~--------------------g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr 174 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDS--------------------GNDGVPVVFSWPSRGSLLGYNYDRESTNYSR 174 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhc--------------------CCCcceEEEEcCCCCeeeecccchhhhhhhH
Confidence 45579999999876532 22222222220 125677888888766532111 1123444
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh--------CCcceeEEEEecc
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM--------VPERVLSLALLNV 160 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~--------~p~~v~~lvl~~~ 160 (367)
.++..-|..+.+....++|+|++||||.+++++...+ .+.++.-+|+-+|
T Consensus 175 ~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 175 PALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred HHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 5555555555555567889999999999999987764 2345777888774
No 174
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.70 E-value=0.00023 Score=69.03 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=49.3
Q ss_pred eEEEeeCCC----CCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHh--CCcceeE
Q 017731 86 IEVCAFDNR----GMGRSSVPVKKTEYTTKIMAK---DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAM--VPERVLS 154 (367)
Q Consensus 86 ~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~---dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~--~p~~v~~ 154 (367)
+-|+++++| |+..+........+.+.|... .+.+-++..|. ++|.|+|+|.||..+..++.. .+..+++
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~ 205 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHR 205 (493)
T ss_pred EEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHH
Confidence 899999998 333332211111223444333 33444455554 579999999999999888775 2346899
Q ss_pred EEEeccCC
Q 017731 155 LALLNVTG 162 (367)
Q Consensus 155 lvl~~~~~ 162 (367)
+|++++..
T Consensus 206 ~i~~sg~~ 213 (493)
T cd00312 206 AISQSGSA 213 (493)
T ss_pred HhhhcCCc
Confidence 99998764
No 175
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.68 E-value=0.0013 Score=60.06 Aligned_cols=68 Identities=15% Similarity=0.059 Sum_probs=56.8
Q ss_pred HHHhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhccC
Q 017731 254 IQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASEKK 324 (367)
Q Consensus 254 ~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~~~ 324 (367)
.....++++|.++|.|..|.+..+.....+.+.+.....+..+|+ +|..-. ..+.+.|..|++.....
T Consensus 255 ~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 255 YSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHHHHcC
Confidence 344567789999999999999999999999999966778888998 998876 67788899999886543
No 176
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.65 E-value=0.00035 Score=66.50 Aligned_cols=80 Identities=19% Similarity=0.101 Sum_probs=57.9
Q ss_pred CCeEEEeeCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhC-------CceEEEEEeChhHHHHHHHHHhCCcc
Q 017731 84 AGIEVCAFDNRGMGRSSVPVK-----KTEYTTKIMAKDVIALMDHLG-------WKQAHVFGHSMGAMIACKLAAMVPER 151 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~-----~~~~~~~~~~~dl~~~l~~~~-------~~~v~lvGhS~Gg~~a~~~a~~~p~~ 151 (367)
-|--++++++|-+|.|.+... ....+.++..+|+..+++.+. ..|++++|.|+||++|..+-.+||+.
T Consensus 58 ~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~ 137 (434)
T PF05577_consen 58 FGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHL 137 (434)
T ss_dssp HTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT
T ss_pred cCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCe
Confidence 377999999999999975432 134578888899988887652 23799999999999999999999999
Q ss_pred eeEEEEeccCCC
Q 017731 152 VLSLALLNVTGG 163 (367)
Q Consensus 152 v~~lvl~~~~~~ 163 (367)
|.+.+.-+++..
T Consensus 138 ~~ga~ASSapv~ 149 (434)
T PF05577_consen 138 FDGAWASSAPVQ 149 (434)
T ss_dssp -SEEEEET--CC
T ss_pred eEEEEeccceee
Confidence 999999887753
No 177
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.63 E-value=0.021 Score=53.88 Aligned_cols=134 Identities=15% Similarity=0.057 Sum_probs=81.7
Q ss_pred cccccC---CcEEEEEEec-----CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCC------
Q 017731 18 AALNDN---GIKIFYRTYG-----RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGG------ 83 (367)
Q Consensus 18 ~~~~~~---g~~l~~~~~g-----~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~------ 83 (367)
.+++++ +..++|.-.. ..+|.||++.|.++.+..- .+..++..-.-. .-...|..
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~----------~~G~tL~~N~ySWn 115 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVK----------YNGKTLYLNPYSWN 115 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEc----------CCCCcceeCCcccc
Confidence 455555 7888887554 2467899999999887654 333333220000 00001111
Q ss_pred CCeEEEeeCCC-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CCceEEEEEeChhHHHHHHHHHh----C--
Q 017731 84 AGIEVCAFDNR-GMGRSSVPVKK-TEYTTKIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAM----V-- 148 (367)
Q Consensus 84 ~g~~vi~~D~~-G~G~S~~~~~~-~~~~~~~~~~dl~~~l~~~-------~~~~v~lvGhS~Gg~~a~~~a~~----~-- 148 (367)
+-..++-+|.| |.|.|-..... ...+-+..++|...++.+. ..++++|.|-|.+|...-++|.+ .
T Consensus 116 k~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 116 KEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred ccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 13468888877 88888754431 1234455666666665532 33689999999999888877764 2
Q ss_pred ----CcceeEEEEeccCC
Q 017731 149 ----PERVLSLALLNVTG 162 (367)
Q Consensus 149 ----p~~v~~lvl~~~~~ 162 (367)
+-.++|+++-++..
T Consensus 196 ~~~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLT 213 (454)
T ss_pred ccCCcccceEEEecCccc
Confidence 12578888888764
No 178
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.59 E-value=0.00042 Score=63.10 Aligned_cols=109 Identities=16% Similarity=0.081 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..|+||++||.|-.-.....++..|...++.++ ...+++.|+.-...... ....+.-+.+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-----------------~~SILvLDYsLt~~~~~-~~~yPtQL~qlv 182 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-----------------EVSILVLDYSLTSSDEH-GHKYPTQLRQLV 182 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-----------------CCeEEEEeccccccccC-CCcCchHHHHHH
Confidence 458999999998776666555555554333332 23788888754330001 111233466777
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhC--C---cceeEEEEeccC
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV--P---ERVLSLALLNVT 161 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~--p---~~v~~lvl~~~~ 161 (367)
+....+++..|.++++|+|-|.||.+++.+.+.. + ..-+++|+++|-
T Consensus 183 ~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 183 ATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred HHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 7777888778889999999999999999887531 1 135789999974
No 179
>COG3150 Predicted esterase [General function prediction only]
Probab=97.55 E-value=0.00043 Score=54.77 Aligned_cols=88 Identities=14% Similarity=0.185 Sum_probs=63.4
Q ss_pred EEEEcCCCCCccchHHhH--HhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 39 VILITGLAGTHDAWGPQL--KGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 39 vv~lHG~~~~~~~~~~~~--~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
||++||+.+|........ +.+.. ..+-+ +.+... ...++.+.++.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~-----------------------~~~~i-------~y~~p~---l~h~p~~a~~e 48 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDE-----------------------DVRDI-------EYSTPH---LPHDPQQALKE 48 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhc-----------------------cccce-------eeecCC---CCCCHHHHHHH
Confidence 899999999887775432 33333 22222 222211 24478899999
Q ss_pred HHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 117 l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
+..++...+.+...|+|-|+||+.|..++.++. + +.|+++|..
T Consensus 49 le~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--i-rav~~NPav 91 (191)
T COG3150 49 LEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--I-RAVVFNPAV 91 (191)
T ss_pred HHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--C-hhhhcCCCc
Confidence 999999998778999999999999999999874 4 356667764
No 180
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.53 E-value=0.00019 Score=62.60 Aligned_cols=108 Identities=16% Similarity=0.119 Sum_probs=57.8
Q ss_pred eEEEEcCCCCCc---cchHHh---HHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCC-CCCCCCCCCCH
Q 017731 38 KVILITGLAGTH---DAWGPQ---LKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRS-SVPVKKTEYTT 110 (367)
Q Consensus 38 ~vv~lHG~~~~~---~~~~~~---~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S-~~~~~~~~~~~ 110 (367)
+||+.||+|.+. ..+..+ ++.... |..|.+++. |-+.+ +.... .--++
T Consensus 7 PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-----------------------G~yV~si~i-g~~~~~D~~~s-~f~~v 61 (279)
T PF02089_consen 7 PVVIWHGMGDSCCNPSSMGSIKELIEEQHP-----------------------GTYVHSIEI-GNDPSEDVENS-FFGNV 61 (279)
T ss_dssp -EEEE--TT--S--TTTHHHHHHHHHHHST-----------------------T--EEE--S-SSSHHHHHHHH-HHSHH
T ss_pred cEEEEEcCccccCChhHHHHHHHHHHHhCC-----------------------CceEEEEEE-CCCcchhhhhh-HHHHH
Confidence 699999999754 244443 444433 788888886 33221 11100 11234
Q ss_pred HHHHHHHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhCCc-ceeEEEEeccCCCCCCCCCc
Q 017731 111 KIMAKDVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMVPE-RVLSLALLNVTGGGFQCCPK 170 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~p~-~v~~lvl~~~~~~~~~~~~~ 170 (367)
.+.++.+.+.++.... +-++++|+|.||.++-.++.+.|+ .|+.+|.++++-.+....|.
T Consensus 62 ~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~Gv~g~p~ 124 (279)
T PF02089_consen 62 NDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMGVFGLPF 124 (279)
T ss_dssp HHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-BSS-TC
T ss_pred HHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccccccCCc
Confidence 5556666665554221 459999999999999999999864 69999999998655544444
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.51 E-value=0.0013 Score=64.14 Aligned_cols=113 Identities=18% Similarity=0.141 Sum_probs=64.8
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
+|+|++|..|+-..-+.++..-...|.....++ -........++.+++|+-+- ..-....++.++++-+
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~------t~~~d~~~~~DFFaVDFnEe-----~tAm~G~~l~dQtEYV 159 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEK------TEDRDNPFSFDFFAVDFNEE-----FTAMHGHILLDQTEYV 159 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHHhhhhcCCchhh------hhcccCccccceEEEcccch-----hhhhccHhHHHHHHHH
Confidence 699999999988766666554442111100000 01112224667888887421 1111233566677666
Q ss_pred HHHHHHh-----C--------CceEEEEEeChhHHHHHHHHHh---CCcceeEEEEeccC
Q 017731 118 IALMDHL-----G--------WKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVT 161 (367)
Q Consensus 118 ~~~l~~~-----~--------~~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~ 161 (367)
.+.++.. + .+.|+++||||||.+|...+.. .++.|.-++..+++
T Consensus 160 ~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 160 NDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 6555432 2 1249999999999999887653 23456666666654
No 182
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.43 E-value=0.012 Score=53.39 Aligned_cols=59 Identities=17% Similarity=0.250 Sum_probs=46.8
Q ss_pred CccEEEEeecCCccCcHHHHHHHHHHhc------------C-----------C-cEEEEcCC-CCcccccChHHHHHHHH
Q 017731 261 GFLVSVIHGRHDVIAQICYARRLAEKLY------------P-----------V-ARMIDLPG-GHLVSHERTEEVNQALI 315 (367)
Q Consensus 261 ~~Pvlii~G~~D~~~p~~~~~~~~~~~~------------~-----------~-~~~~~~~g-gH~~~~e~p~~~~~~i~ 315 (367)
+++||+..|..|.+++.-..+.+.+.+. . + .+++.+.+ ||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 5899999999999999887777777652 0 1 33445556 99996 59999999999
Q ss_pred HHHhh
Q 017731 316 DLIKA 320 (367)
Q Consensus 316 ~fl~~ 320 (367)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99975
No 183
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.41 E-value=0.0026 Score=49.93 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCe-EEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGI-EVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (367)
+...||+.-|+|..+.....++- .+ .+ -++++|+..... .+++..
T Consensus 10 gd~LIvyFaGwgtpps~v~HLil--pe-----------------------N~dl~lcYDY~dl~l--------dfDfsA- 55 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLIL--PE-----------------------NHDLLLCYDYQDLNL--------DFDFSA- 55 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhccC--CC-----------------------CCcEEEEeehhhcCc--------ccchhh-
Confidence 33378889999988876655432 12 44 456678763321 122221
Q ss_pred HHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCCCCCCCCccchhhHHH
Q 017731 114 AKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGGGFQCCPKLDLQTLSI 178 (367)
Q Consensus 114 ~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 178 (367)
.+.+.+|++|||-.+|-++.... ++++.+.+++.+.+....-.++......
T Consensus 56 ------------y~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTgLpcDds~GIp~AIF~g 106 (214)
T COG2830 56 ------------YRHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTGLPCDDSFGIPPAIFKG 106 (214)
T ss_pred ------------hhhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCCCCccccCCCCHHHHHH
Confidence 24578999999999999888776 4788888888765544444444443333
No 184
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.41 E-value=0.0076 Score=52.25 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=73.8
Q ss_pred CCeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 36 PTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 36 ~p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.|.|+++-.+.++. ...+..++.|.. ...|+..|+-.--. .+.....+++++++
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp-----------------------~~~vyitDW~dAr~--Vp~~~G~FdldDYI 157 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLP-----------------------YHDVYITDWVDARM--VPLEAGHFDLDDYI 157 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhcc-----------------------ccceeEeeccccce--eecccCCccHHHHH
Confidence 45677777766654 455677777776 67888888864322 23333578999999
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHH-----HHHHHHHhCCcceeEEEEeccCCCC
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAM-----IACKLAAMVPERVLSLALLNVTGGG 164 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~-----~a~~~a~~~p~~v~~lvl~~~~~~~ 164 (367)
+.+.+.+..+|.+ +++++-|.=+. ++++.+...|..-+++++++++...
T Consensus 158 dyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 158 DYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred HHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 9999999999965 88898887654 4444444567788999999987643
No 185
>COG0627 Predicted esterase [General function prediction only]
Probab=97.19 E-value=0.002 Score=57.88 Aligned_cols=55 Identities=27% Similarity=0.253 Sum_probs=41.1
Q ss_pred CCHHH-HHHHHHHHHHHhCC-----ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 108 YTTKI-MAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 108 ~~~~~-~~~dl~~~l~~~~~-----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
+.+++ +.+++-..+++... ++..++||||||.-|+.+|+++|+++..+..+++..
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccc
Confidence 44443 33455544443322 268999999999999999999999999999998874
No 186
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.18 E-value=0.012 Score=55.21 Aligned_cols=118 Identities=18% Similarity=0.134 Sum_probs=71.2
Q ss_pred CCcEEEEEEec---CCCCeEEEEcCCC---CCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCC-eEEEeeCCC-
Q 017731 23 NGIKIFYRTYG---RGPTKVILITGLA---GTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG-IEVCAFDNR- 94 (367)
Q Consensus 23 ~g~~l~~~~~g---~~~p~vv~lHG~~---~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g-~~vi~~D~~- 94 (367)
|-..|...... ++.|+||+|||.+ ++......-...|++ +| +-|+++++|
T Consensus 78 DCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~----------------------~g~vVvVSvNYRL 135 (491)
T COG2272 78 DCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAA----------------------RGDVVVVSVNYRL 135 (491)
T ss_pred cceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHh----------------------cCCEEEEEeCccc
Confidence 44455544433 3558999999974 333332233456666 45 889999887
Q ss_pred C-CCCCCC---C---CCCCCCCHHHHH---HHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh--CCcceeEEEEecc
Q 017731 95 G-MGRSSV---P---VKKTEYTTKIMA---KDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM--VPERVLSLALLNV 160 (367)
Q Consensus 95 G-~G~S~~---~---~~~~~~~~~~~~---~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~--~p~~v~~lvl~~~ 160 (367)
| .|.-+. . .......+.|++ +.+.+-|++.|.+ .|.|+|+|.||+.++.+.+. ....++++|+.++
T Consensus 136 G~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg 215 (491)
T COG2272 136 GALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSG 215 (491)
T ss_pred ccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCC
Confidence 1 121111 1 000122344444 3455666777654 69999999999999887664 1236888899888
Q ss_pred CC
Q 017731 161 TG 162 (367)
Q Consensus 161 ~~ 162 (367)
..
T Consensus 216 ~~ 217 (491)
T COG2272 216 AA 217 (491)
T ss_pred CC
Confidence 64
No 187
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.18 E-value=0.0038 Score=59.39 Aligned_cols=119 Identities=17% Similarity=0.146 Sum_probs=75.5
Q ss_pred ccccCCcEEEEEEecC-----CCCeEEEEcCCCCCc----cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEE
Q 017731 19 ALNDNGIKIFYRTYGR-----GPTKVILITGLAGTH----DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVC 89 (367)
Q Consensus 19 ~~~~~g~~l~~~~~g~-----~~p~vv~lHG~~~~~----~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi 89 (367)
.++-||.+|.|...++ +.|++| ||+|+-. -.|.+......+ +|...+
T Consensus 399 atSkDGT~IPYFiv~K~~~~d~~pTll--~aYGGF~vsltP~fs~~~~~WLe----------------------rGg~~v 454 (648)
T COG1505 399 ATSKDGTRIPYFIVRKGAKKDENPTLL--YAYGGFNISLTPRFSGSRKLWLE----------------------RGGVFV 454 (648)
T ss_pred EEcCCCccccEEEEecCCcCCCCceEE--EeccccccccCCccchhhHHHHh----------------------cCCeEE
Confidence 4566999999988752 245554 4444322 234444444444 488888
Q ss_pred eeCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHh---CC---ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 90 AFDNRGMGRSSVPVK--KTEYTTKIMAKDVIALMDHL---GW---KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 90 ~~D~~G~G~S~~~~~--~~~~~~~~~~~dl~~~l~~~---~~---~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.-+.||=|+=...-. ....+-+...+|..++.+.+ |+ +++.+.|-|-||.+.-....++|+.+.++|+--|.
T Consensus 455 ~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 455 LANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred EEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 889999776542110 01122333445555555444 33 46889999999999999999999999888876653
No 188
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.06 E-value=0.021 Score=52.47 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=42.7
Q ss_pred ccEEEEeecCCccCcHHHHHHHHHHh---cCCcEEEEc-----------CC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 262 FLVSVIHGRHDVIAQICYARRLAEKL---YPVARMIDL-----------PG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 262 ~Pvlii~G~~D~~~p~~~~~~~~~~~---~~~~~~~~~-----------~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
+-.+..|+..|..+|.+.-+.+.+.+ .=+++++.+ .. .|.+-+..-.-+...+-..|++..
T Consensus 294 ~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek~~ 369 (403)
T PF11144_consen 294 IIYVSYHSIKDDLAPAEDKEELYEILKNLGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEKLQ 369 (403)
T ss_pred eEEEEEeccCCCCCCHHHHHHHHHHHHHcCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHHhh
Confidence 44566799999999999888887765 336777776 33 566555555667777777776643
No 189
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.03 E-value=0.002 Score=51.78 Aligned_cols=52 Identities=21% Similarity=0.263 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCc----ceeEEEEeccCC
Q 017731 111 KIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPE----RVLSLALLNVTG 162 (367)
Q Consensus 111 ~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~----~v~~lvl~~~~~ 162 (367)
..+.+.+...++.. ...+++++|||+||.+|..++..... .+..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 33444454444443 56789999999999999999887654 567788888763
No 190
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.02 E-value=0.0039 Score=61.01 Aligned_cols=118 Identities=14% Similarity=-0.003 Sum_probs=64.8
Q ss_pred CCcEEEEEEecC-----CCCeEEEEcCCCCCc--c--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC
Q 017731 23 NGIKIFYRTYGR-----GPTKVILITGLAGTH--D--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (367)
Q Consensus 23 ~g~~l~~~~~g~-----~~p~vv~lHG~~~~~--~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (367)
|=..|....... .-|++|++||.+... . ....-...+.+ ++.-||++.+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~----------------------~~vivVt~nY 164 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAAS----------------------KDVIVVTINY 164 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHH----------------------HTSEEEEE--
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccC----------------------CCEEEEEecc
Confidence 445566555432 248999999975422 1 12222233334 5899999998
Q ss_pred C----CCCCCCCCCCC-CCCCHHHHHH---HHHHHHHHhCC--ceEEEEEeChhHHHHHHHHHhC--CcceeEEEEeccC
Q 017731 94 R----GMGRSSVPVKK-TEYTTKIMAK---DVIALMDHLGW--KQAHVFGHSMGAMIACKLAAMV--PERVLSLALLNVT 161 (367)
Q Consensus 94 ~----G~G~S~~~~~~-~~~~~~~~~~---dl~~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~--p~~v~~lvl~~~~ 161 (367)
| |+-.+...... ..+.+.|+.. .+.+-|.+.|. ++|.|+|||.||..+......- ...++++|+.++.
T Consensus 165 Rlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 165 RLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp --HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 8 44333322211 2344555544 34444555665 4699999999999988877652 2479999999985
Q ss_pred C
Q 017731 162 G 162 (367)
Q Consensus 162 ~ 162 (367)
.
T Consensus 245 ~ 245 (535)
T PF00135_consen 245 A 245 (535)
T ss_dssp T
T ss_pred c
Confidence 4
No 191
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.02 E-value=0.084 Score=45.26 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=56.8
Q ss_pred eEEEEcCC--CCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 38 KVILITGL--AGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 38 ~vv~lHG~--~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
+|=|+-|. |... -.|+.+.+.|++ +||.|++.-+.- .++-...+
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~----------------------~Gy~ViAtPy~~-----------tfDH~~~A 65 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLAD----------------------RGYAVIATPYVV-----------TFDHQAIA 65 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHh----------------------CCcEEEEEecCC-----------CCcHHHHH
Confidence 34455553 2222 468899999998 799999986641 11212222
Q ss_pred HHH----HHHH----HHhCC----ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 115 KDV----IALM----DHLGW----KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 115 ~dl----~~~l----~~~~~----~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
+.+ ...+ +..+. -+++-+|||+||-+-+.+...++..-++.++++-.
T Consensus 66 ~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 66 REVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 222 2222 22122 26788999999999999888776555777888754
No 192
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.02 E-value=0.021 Score=58.61 Aligned_cols=95 Identities=16% Similarity=0.143 Sum_probs=64.1
Q ss_pred CCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHH
Q 017731 34 RGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIM 113 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 113 (367)
+..|+++|+|..-+....+.+++..|.- |-+|.-....- ..-+++..
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle~--------------------------------PaYglQ~T~~v-P~dSies~ 2167 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLEI--------------------------------PAYGLQCTEAV-PLDSIESL 2167 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcCC--------------------------------cchhhhccccC-CcchHHHH
Confidence 3456799999987766666666555432 22222111110 23378888
Q ss_pred HHHHHHHHHHhCC-ceEEEEEeChhHHHHHHHHHhCC--cceeEEEEeccC
Q 017731 114 AKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLNVT 161 (367)
Q Consensus 114 ~~dl~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~~~ 161 (367)
++....-++++.. .|..++|+|+|+.++..+|.... +....+|++++.
T Consensus 2168 A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2168 AAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred HHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 8877777777654 58999999999999999987542 335669999986
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.013 Score=48.39 Aligned_cols=118 Identities=20% Similarity=0.193 Sum_probs=69.4
Q ss_pred CeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC---CCCCCCCCCCCCCCCHHH
Q 017731 37 TKVILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR---GMGRSSVPVKKTEYTTKI 112 (367)
Q Consensus 37 p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~---G~G~S~~~~~~~~~~~~~ 112 (367)
..+|++||-|.-. ..|.+ .|.- .++-+.=-|-|++.+-...||.|+..+.- -+-.+...+.....+..+
T Consensus 102 kLlVLIHGSGvVrAGQWAR---rLII----N~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~ve 174 (297)
T KOG3967|consen 102 KLLVLIHGSGVVRAGQWAR---RLII----NEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVE 174 (297)
T ss_pred ceEEEEecCceEecchHhh---hhhh----ccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHH
Confidence 3799999988644 44532 1110 00000112445555556679999998642 122222222111223333
Q ss_pred HHHHH-HHHHHHhCCceEEEEEeChhHHHHHHHHHhCCc--ceeEEEEeccC
Q 017731 113 MAKDV-IALMDHLGWKQAHVFGHSMGAMIACKLAAMVPE--RVLSLALLNVT 161 (367)
Q Consensus 113 ~~~dl-~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~v~~lvl~~~~ 161 (367)
.+..+ ..++.....+.+.++.||.||...+.+..++|+ +|.++.+.+++
T Consensus 175 h~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 175 HAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 44322 344444566789999999999999999999874 68888887765
No 194
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.93 E-value=0.0055 Score=55.72 Aligned_cols=118 Identities=19% Similarity=0.160 Sum_probs=81.7
Q ss_pred cEEEEEEe----cCCCCeEEEEcCCCCCccchHH---hHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCC
Q 017731 25 IKIFYRTY----GRGPTKVILITGLAGTHDAWGP---QLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMG 97 (367)
Q Consensus 25 ~~l~~~~~----g~~~p~vv~lHG~~~~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G 97 (367)
...+|... +++.-+|++-.|.-++-+.|.. ++-.++.. .+--+|-.++|-+|
T Consensus 65 F~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~---------------------~~AllVFaEHRyYG 123 (492)
T KOG2183|consen 65 FDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPE---------------------LKALLVFAEHRYYG 123 (492)
T ss_pred eeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHh---------------------hCceEEEeehhccc
Confidence 34555543 3343459999999888776642 44444442 35678888999999
Q ss_pred CCCCCCCC--------CCCCHHHHHHHHHHHHHHhCC------ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCCC
Q 017731 98 RSSVPVKK--------TEYTTKIMAKDVIALMDHLGW------KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTGG 163 (367)
Q Consensus 98 ~S~~~~~~--------~~~~~~~~~~dl~~~l~~~~~------~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 163 (367)
+|-.--.. ...+.++-.+|..+++..+.. .+++.+|.|+||+++..+=.+||..|.|...-+.+..
T Consensus 124 eS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 124 ESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred cCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 99754321 123556666677777766633 3799999999999999999999999888777666543
No 195
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.76 E-value=0.082 Score=51.29 Aligned_cols=79 Identities=16% Similarity=0.093 Sum_probs=58.5
Q ss_pred CCeEEEeeCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhCCcceeEE
Q 017731 84 AGIEVCAFDNRGMGRSSVPV------KKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~------~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 155 (367)
+|+-......||=|.-...- .....++.|+++....+++.- ..+.++++|.|.||++.-..+.+.|+.++++
T Consensus 476 RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~i 555 (682)
T COG1770 476 RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGI 555 (682)
T ss_pred CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhhe
Confidence 68766666788866543211 113457888887777777643 2347999999999999999999999999999
Q ss_pred EEeccCC
Q 017731 156 ALLNVTG 162 (367)
Q Consensus 156 vl~~~~~ 162 (367)
|+--|..
T Consensus 556 iA~VPFV 562 (682)
T COG1770 556 IAQVPFV 562 (682)
T ss_pred eecCCcc
Confidence 9887754
No 196
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.71 E-value=0.0042 Score=48.93 Aligned_cols=37 Identities=22% Similarity=0.235 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+...+.+.++++.....++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 3455666676666666789999999999999998876
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.65 E-value=0.0043 Score=59.47 Aligned_cols=53 Identities=15% Similarity=0.098 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHH----hCCceEEEEEeChhHHHHHHHHHhCC---------------cceeEEEEeccCCC
Q 017731 111 KIMAKDVIALMDH----LGWKQAHVFGHSMGAMIACKLAAMVP---------------ERVLSLALLNVTGG 163 (367)
Q Consensus 111 ~~~~~dl~~~l~~----~~~~~v~lvGhS~Gg~~a~~~a~~~p---------------~~v~~lvl~~~~~~ 163 (367)
+++-..+...++. -+.+|++|+||||||.+++.+..... ..|++.|.++++..
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 3343444444442 24579999999999999999876321 24788999998743
No 198
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.58 E-value=0.053 Score=47.67 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=32.0
Q ss_pred eEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 128 QAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 128 ~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
.-+|+|-|+||.+++..+..+|+++..++..++..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 46899999999999999999999999999888763
No 199
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.55 E-value=0.0034 Score=58.14 Aligned_cols=87 Identities=20% Similarity=0.246 Sum_probs=56.8
Q ss_pred cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeE------EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017731 50 DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIE------VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDH 123 (367)
Q Consensus 50 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~ 123 (367)
..|..+++.|.. =||+ -..+|+|= |.......+..+.++..-++...+.
T Consensus 124 ~~w~~~i~~lv~----------------------~GYe~~~~l~ga~YDwRl---s~~~~e~rd~yl~kLK~~iE~~~~~ 178 (473)
T KOG2369|consen 124 WYWHELIENLVG----------------------IGYERGKTLFGAPYDWRL---SYHNSEERDQYLSKLKKKIETMYKL 178 (473)
T ss_pred HHHHHHHHHHHh----------------------hCcccCceeeccccchhh---ccCChhHHHHHHHHHHHHHHHHHHH
Confidence 367788888887 3655 44568872 2211111122344444455555555
Q ss_pred hCCceEEEEEeChhHHHHHHHHHhCCc--------ceeEEEEeccC
Q 017731 124 LGWKQAHVFGHSMGAMIACKLAAMVPE--------RVLSLALLNVT 161 (367)
Q Consensus 124 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~--------~v~~lvl~~~~ 161 (367)
-|.+|++|++||||+.+.+.+...+++ .+++++-++++
T Consensus 179 ~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 179 NGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 577999999999999999999988876 36666666655
No 200
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.15 E-value=0.01 Score=51.29 Aligned_cols=48 Identities=13% Similarity=0.299 Sum_probs=38.7
Q ss_pred HHHHHHHHHH-h--CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 114 AKDVIALMDH-L--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 114 ~~dl~~~l~~-~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.+++.-++++ . +.++..++|||+||.+++.....+|+.+...++++|+
T Consensus 121 ~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPS 171 (264)
T COG2819 121 TEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPS 171 (264)
T ss_pred HHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecch
Confidence 3344444544 2 3356899999999999999999999999999999987
No 201
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.08 E-value=0.019 Score=49.21 Aligned_cols=47 Identities=21% Similarity=0.215 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhC----CcceeEEEEeccCC
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVTG 162 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~~ 162 (367)
+-+..+++..+ +++.+.|||.||.+|..++... .++|.++...++++
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 34444445444 4599999999999999998873 35799999999864
No 202
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.00 E-value=0.043 Score=51.41 Aligned_cols=79 Identities=15% Similarity=0.132 Sum_probs=63.7
Q ss_pred CCeEEEeeCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHhCC-------ceEEEEEeChhHHHHHHHHHhCCcc
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKK-----TEYTTKIMAKDVIALMDHLGW-------KQAHVFGHSMGAMIACKLAAMVPER 151 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~-----~~~~~~~~~~dl~~~l~~~~~-------~~v~lvGhS~Gg~~a~~~a~~~p~~ 151 (367)
-|-.|+..++|-+|.|...... ...+..+...|+.++++++.. .|++.+|.|+-|.++..+=.++|+.
T Consensus 117 fgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel 196 (514)
T KOG2182|consen 117 FGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPEL 196 (514)
T ss_pred hCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchh
Confidence 3779999999999988644321 234677888899999887632 2899999999999999999999999
Q ss_pred eeEEEEeccCC
Q 017731 152 VLSLALLNVTG 162 (367)
Q Consensus 152 v~~lvl~~~~~ 162 (367)
+.|-|.-+++.
T Consensus 197 ~~GsvASSapv 207 (514)
T KOG2182|consen 197 TVGSVASSAPV 207 (514)
T ss_pred heeecccccce
Confidence 99888877654
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.82 E-value=0.022 Score=49.12 Aligned_cols=29 Identities=28% Similarity=0.284 Sum_probs=22.3
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHHh
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+.+++....++++.|||+||.+|..++..
T Consensus 120 ~~~~~~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 120 SALKQYPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHhhCCCceEEEEccCHHHHHHHHHHHH
Confidence 33333345689999999999999998875
No 204
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.69 E-value=1.1 Score=40.82 Aligned_cols=67 Identities=3% Similarity=-0.011 Sum_probs=49.6
Q ss_pred CccEEEEeecCCccCcHHHHHHHHHHh-cCCcEE--EEcCC-CCccccc-ChHHHHHHHHHHHhhhccCCCC
Q 017731 261 GFLVSVIHGRHDVIAQICYARRLAEKL-YPVARM--IDLPG-GHLVSHE-RTEEVNQALIDLIKASEKKISP 327 (367)
Q Consensus 261 ~~Pvlii~G~~D~~~p~~~~~~~~~~~-~~~~~~--~~~~g-gH~~~~e-~p~~~~~~i~~fl~~~~~~~~~ 327 (367)
..+.+++.+..|.++|....+++.+.. ...+.+ +-+.+ -|..+.. .|....+...+|++.......+
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~~~~ 296 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISSYNL 296 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccccCC
Confidence 467899999999999999888886544 223333 33444 7877755 8999999999999998755433
No 205
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.66 E-value=0.064 Score=50.49 Aligned_cols=124 Identities=15% Similarity=0.025 Sum_probs=73.1
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC-CCCCCCCCCCCCCCCCCHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD-NRGMGRSSVPVKKTEYTTKIM 113 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D-~~G~G~S~~~~~~~~~~~~~~ 113 (367)
..|.++++.|.++++..|..+.+.=... +. ..+-+-++.-+..-...-.++-+| .-|.|.|....+...-+....
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~r---I~-~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKR---IQ-SGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCee---ee-CCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhcc
Confidence 3578999999999998876654311100 00 000000001111122345788899 559999986333234455555
Q ss_pred HHHHHHHHHH-------hCC--ceEEEEEeChhHHHHHHHHHhCCc---ceeEEEEeccCC
Q 017731 114 AKDVIALMDH-------LGW--KQAHVFGHSMGAMIACKLAAMVPE---RVLSLALLNVTG 162 (367)
Q Consensus 114 ~~dl~~~l~~-------~~~--~~v~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~ 162 (367)
.+|+..+.+. +.. .+.+|+|-|+||.-+..+|..--+ ..++++++.+..
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 5666555442 333 489999999999999998875433 356666666543
No 206
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=95.60 E-value=0.021 Score=42.96 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=26.8
Q ss_pred CCCccccccCCcEEEEEEecC---CCCeEEEEcCCCCCccchHHh
Q 017731 14 AAPDAALNDNGIKIFYRTYGR---GPTKVILITGLAGTHDAWGPQ 55 (367)
Q Consensus 14 ~~~~~~~~~~g~~l~~~~~g~---~~p~vv~lHG~~~~~~~~~~~ 55 (367)
.-|...++++|..||+....+ +..+|||+||++++--.|..+
T Consensus 67 ~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 67 SFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp TS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred cCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 446667788999999987753 233799999999998777665
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.37 E-value=0.047 Score=45.06 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=43.7
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh------CCcceeE
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTT----KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM------VPERVLS 154 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~----~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~------~p~~v~~ 154 (367)
...+..+++|-..... . ...+. .++.+.+.+....-...+++|+|+|+||.++..++.. ..++|.+
T Consensus 39 ~~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~a 114 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAA 114 (179)
T ss_dssp EEEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEE
T ss_pred eeEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEE
Confidence 4666667766332221 0 11133 3344444444445566799999999999999999877 2357999
Q ss_pred EEEeccC
Q 017731 155 LALLNVT 161 (367)
Q Consensus 155 lvl~~~~ 161 (367)
+++++-+
T Consensus 115 vvlfGdP 121 (179)
T PF01083_consen 115 VVLFGDP 121 (179)
T ss_dssp EEEES-T
T ss_pred EEEecCC
Confidence 9999865
No 208
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.35 E-value=0.12 Score=49.90 Aligned_cols=78 Identities=13% Similarity=0.024 Sum_probs=55.5
Q ss_pred CCeEEEeeCCCCCCCCCCC---CC---CCCCCHHHHHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhCCcceeEE
Q 017731 84 AGIEVCAFDNRGMGRSSVP---VK---KTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~---~~---~~~~~~~~~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 155 (367)
.|+-....|.||=|.-... .. ....++++++.-...+++.= ..++..+.|.|.||.++..++.++|+.+.++
T Consensus 498 ~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 498 RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 5877777799997654321 11 12335666666666665532 3357999999999999999999999999888
Q ss_pred EEeccC
Q 017731 156 ALLNVT 161 (367)
Q Consensus 156 vl~~~~ 161 (367)
|+--|.
T Consensus 578 ia~Vpf 583 (712)
T KOG2237|consen 578 IAKVPF 583 (712)
T ss_pred hhcCcc
Confidence 876654
No 209
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=95.28 E-value=0.029 Score=51.39 Aligned_cols=109 Identities=15% Similarity=0.039 Sum_probs=79.7
Q ss_pred EEEecCCCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC-CCC
Q 017731 29 YRTYGRGPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK-KTE 107 (367)
Q Consensus 29 ~~~~g~~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~-~~~ 107 (367)
....+...|+|+..-|++.+..-.+.=...|. +-+-+.+++|-+|.|...+. -..
T Consensus 56 LlHk~~drPtV~~T~GY~~~~~p~r~Ept~Ll------------------------d~NQl~vEhRfF~~SrP~p~DW~~ 111 (448)
T PF05576_consen 56 LLHKDFDRPTVLYTEGYNVSTSPRRSEPTQLL------------------------DGNQLSVEHRFFGPSRPEPADWSY 111 (448)
T ss_pred EEEcCCCCCeEEEecCcccccCccccchhHhh------------------------ccceEEEEEeeccCCCCCCCCccc
Confidence 33444567889889998876543322222222 34788999999999986553 245
Q ss_pred CCHHHHHHHHHHHHHHhC---CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 108 YTTKIMAKDVIALMDHLG---WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 108 ~~~~~~~~dl~~~l~~~~---~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.++++-+.|.+.+++.+. .++.+--|-|=||+.++.+=.-||+-|++.|.--.+
T Consensus 112 Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 112 LTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 688999999998888763 257888999999999998888899999987765443
No 210
>PLN02162 triacylglycerol lipase
Probab=95.28 E-value=0.049 Score=51.00 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 110 ~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
..++.+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 3445556666666666668999999999999998765
No 211
>PLN00413 triacylglycerol lipase
Probab=95.20 E-value=0.061 Score=50.51 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh---C-----CcceeEEEEeccC
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM---V-----PERVLSLALLNVT 161 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lvl~~~~ 161 (367)
.++.+.+.++++.....++++.|||+||++|..+|.. + ..++.++...+++
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 3566777788877776789999999999999998752 1 1234556666653
No 212
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.10 E-value=0.08 Score=43.39 Aligned_cols=53 Identities=25% Similarity=0.260 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhC-----CceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccCC
Q 017731 110 TKIMAKDVIALMDHLG-----WKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVTG 162 (367)
Q Consensus 110 ~~~~~~dl~~~l~~~~-----~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 162 (367)
-++-+.+|..+++.+. ..++.++|||+|+.++-..+...+..++.+|++++++
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 3455566777766552 2368999999999999998888677899999999875
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.05 E-value=0.051 Score=45.53 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHHHHhCC-ceEEEEEeChhHHHHHHHHHhC
Q 017731 108 YTTKIMAKDVIALMDHLGW-KQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 108 ~~~~~~~~dl~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
....|..+....++++.+. ++++|+|||.|+.+..++...+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3456666677777777754 5899999999999999998864
No 214
>PLN02454 triacylglycerol lipase
Probab=94.84 E-value=0.049 Score=50.49 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh
Q 017731 113 MAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 113 ~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+...+..+++..... ++++.|||+||.+|+.+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 344455555555434 39999999999999998864
No 215
>PLN02571 triacylglycerol lipase
Probab=94.79 E-value=0.047 Score=50.63 Aligned_cols=37 Identities=24% Similarity=0.281 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+++.+++..+++..... ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55667777777766543 68999999999999998864
No 216
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.37 E-value=0.23 Score=48.91 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=46.9
Q ss_pred CCeEEEeeCCC----CCCCCCCCCCCCCCCHHHHHHHHH---HHHHHhCC--ceEEEEEeChhHHHHHHHHHhC--Ccce
Q 017731 84 AGIEVCAFDNR----GMGRSSVPVKKTEYTTKIMAKDVI---ALMDHLGW--KQAHVFGHSMGAMIACKLAAMV--PERV 152 (367)
Q Consensus 84 ~g~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~~dl~---~~l~~~~~--~~v~lvGhS~Gg~~a~~~a~~~--p~~v 152 (367)
+..-|+++.+| |+...........+.+.|++..+. +-|...|. ++|.|+|||.||..+..+.... ...+
T Consensus 143 ~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF 222 (545)
T KOG1516|consen 143 KDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLF 222 (545)
T ss_pred CCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHH
Confidence 46777777766 332222111113445555555444 34444443 5799999999999987766531 2457
Q ss_pred eEEEEeccCC
Q 017731 153 LSLALLNVTG 162 (367)
Q Consensus 153 ~~lvl~~~~~ 162 (367)
.++|.+++..
T Consensus 223 ~~aI~~SG~~ 232 (545)
T KOG1516|consen 223 HKAISMSGNA 232 (545)
T ss_pred HHHHhhcccc
Confidence 7777777653
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.24 E-value=0.047 Score=49.90 Aligned_cols=101 Identities=14% Similarity=0.203 Sum_probs=54.8
Q ss_pred CCcEEEEEEecCCCCeEEEEcCCCC-CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCC
Q 017731 23 NGIKIFYRTYGRGPTKVILITGLAG-THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSV 101 (367)
Q Consensus 23 ~g~~l~~~~~g~~~p~vv~lHG~~~-~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~ 101 (367)
+..++.+....+++-.+|++||+-+ +...|...+....... -+..++..+..|. ...
T Consensus 67 ~~w~~p~~~~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~--------------------p~~~iv~~g~~~~--~~~ 124 (405)
T KOG4372|consen 67 DLWDLPYSFPTKPKHLVVLTHGLHGADMEYWKEKIEQMTKKM--------------------PDKLIVVRGKMNN--MCQ 124 (405)
T ss_pred ccccCCcccccCCceEEEeccccccccHHHHHHHHHhhhcCC--------------------CcceEeeeccccc--hhh
Confidence 3444444112223347999999988 5566666665555411 1233333333322 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHH
Q 017731 102 PVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145 (367)
Q Consensus 102 ~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a 145 (367)
..+.-.+--..+++++.+.+....++++-.+|||+||.++-.+.
T Consensus 125 T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 125 TFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred ccccceeeecccHHHHhhhhhccccceeeeeeeecCCeeeeEEE
Confidence 11111222334556666666666678999999999999876543
No 218
>PLN02408 phospholipase A1
Probab=94.22 E-value=0.075 Score=48.59 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh
Q 017731 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+..+++..+++..+.. ++++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455666777666543 58999999999999998865
No 219
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.17 E-value=0.098 Score=41.90 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=32.0
Q ss_pred ceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 127 KQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 127 ~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
....+-|.||||..|..+.-++|+.+.++|.+++.
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 45677899999999999999999999999999986
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.80 E-value=0.14 Score=46.62 Aligned_cols=38 Identities=24% Similarity=0.319 Sum_probs=30.9
Q ss_pred CCceEEEEEeChhHHHHHHHHHhCCc-----ceeEEEEeccCC
Q 017731 125 GWKQAHVFGHSMGAMIACKLAAMVPE-----RVLSLALLNVTG 162 (367)
Q Consensus 125 ~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~v~~lvl~~~~~ 162 (367)
|.+|+.|+|||+|+.+.+.......+ .|+.+++++.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 66789999999999999987765433 389999998763
No 221
>PLN02934 triacylglycerol lipase
Probab=93.76 E-value=0.11 Score=49.31 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 110 TKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 110 ~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
..+....+.++++.....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 3456667777777777678999999999999999874
No 222
>PLN02310 triacylglycerol lipase
Probab=93.65 E-value=0.2 Score=46.48 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhC---C-ceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLG---W-KQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~---~-~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+++.+.+..+++.+. . .++++.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445566667776553 1 369999999999999988753
No 223
>PLN02324 triacylglycerol lipase
Probab=93.34 E-value=0.13 Score=47.72 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh
Q 017731 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~ 147 (367)
++.++|..+++..... +|++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445666777766532 69999999999999998864
No 224
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.28 E-value=0.14 Score=33.98 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=20.7
Q ss_pred cccccCCcEEEEEEec--C-------CCCeEEEEcCCCCCccchH
Q 017731 18 AALNDNGIKIFYRTYG--R-------GPTKVILITGLAGTHDAWG 53 (367)
Q Consensus 18 ~~~~~~g~~l~~~~~g--~-------~~p~vv~lHG~~~~~~~~~ 53 (367)
.+.+.||.-|...+.. + ++|+|++.||+.+++..|-
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 4567789887765542 2 3578999999999998883
No 225
>PLN02802 triacylglycerol lipase
Probab=92.92 E-value=0.16 Score=48.10 Aligned_cols=36 Identities=31% Similarity=0.365 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHh
Q 017731 112 IMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~ 147 (367)
++.+++..+++....+ +|++.|||+||.+|...|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 4455666666665432 68999999999999988764
No 226
>PLN02753 triacylglycerol lipase
Probab=92.66 E-value=0.19 Score=47.91 Aligned_cols=37 Identities=27% Similarity=0.286 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhCC-----ceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~-----~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+++.+.+..+++.... -+|++.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445566666666532 379999999999999998853
No 227
>PLN02719 triacylglycerol lipase
Probab=92.17 E-value=0.23 Score=47.14 Aligned_cols=37 Identities=27% Similarity=0.307 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhCC-----ceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLGW-----KQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~-----~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+++.+.|..+++.... .++.+.|||+||.+|...|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3445566666665532 279999999999999998853
No 228
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.11 E-value=0.22 Score=47.36 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhC---C-ceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLG---W-KQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~---~-~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
++..+++..+++.+. . .++++.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345567777776653 1 369999999999999988853
No 229
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.04 E-value=1 Score=43.39 Aligned_cols=70 Identities=21% Similarity=0.285 Sum_probs=51.7
Q ss_pred HHHHhHhcCccEEEEeecCCccCcHHHHHHHHHHh----cC-------CcEEEEcCC-CCccccc--ChHHHHHHHHHHH
Q 017731 253 DIQTIRSAGFLVSVIHGRHDVIAQICYARRLAEKL----YP-------VARMIDLPG-GHLVSHE--RTEEVNQALIDLI 318 (367)
Q Consensus 253 ~~~~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~----~~-------~~~~~~~~g-gH~~~~e--~p~~~~~~i~~fl 318 (367)
++..++.-.-.+++.||..|.++|+....++.+++ .. -.++..+|| +|+.--. .+-+....|.+|+
T Consensus 345 DLsaF~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WV 424 (474)
T PF07519_consen 345 DLSAFRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWV 424 (474)
T ss_pred CHHHHHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHH
Confidence 34555666678999999999999987776666554 21 246788899 9987654 4557788889999
Q ss_pred hhhc
Q 017731 319 KASE 322 (367)
Q Consensus 319 ~~~~ 322 (367)
++-.
T Consensus 425 E~G~ 428 (474)
T PF07519_consen 425 ENGK 428 (474)
T ss_pred hCCC
Confidence 8754
No 230
>PLN02761 lipase class 3 family protein
Probab=91.90 E-value=0.26 Score=46.92 Aligned_cols=36 Identities=31% Similarity=0.354 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhC-----C-ceEEEEEeChhHHHHHHHHH
Q 017731 111 KIMAKDVIALMDHLG-----W-KQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~-----~-~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+++.+.|..+++..+ . -++++.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345566666666652 1 26999999999999998875
No 231
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.02 E-value=0.32 Score=46.68 Aligned_cols=86 Identities=20% Similarity=0.232 Sum_probs=50.1
Q ss_pred hhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---ceEEEEEeChhHHHHHHHHHh-
Q 017731 72 ILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAM- 147 (367)
Q Consensus 72 ~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~---~~v~lvGhS~Gg~~a~~~a~~- 147 (367)
.+-||-..+.++..|+.-..|+++.-.+..+ .-+...-.+.+.+.+.+.++ .+++.+||||||.++=.+...
T Consensus 472 Lp~D~p~~Rii~l~Y~Tsit~w~~~~p~e~~----r~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda 547 (697)
T KOG2029|consen 472 LPDDYPKSRIIGLEYTTSITDWRARCPAEAH----RRSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDA 547 (697)
T ss_pred ccccCccceEEEeecccchhhhcccCcccch----hhHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHH
Confidence 3445555555555555555566653222211 22444445555555555543 479999999999888766543
Q ss_pred ----CCc------ceeEEEEeccC
Q 017731 148 ----VPE------RVLSLALLNVT 161 (367)
Q Consensus 148 ----~p~------~v~~lvl~~~~ 161 (367)
.|+ ...|+++++.+
T Consensus 548 ~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 548 YCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred hhcCCchhhhhhccCCceEEEecC
Confidence 233 35678887765
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=90.95 E-value=1.7 Score=38.76 Aligned_cols=115 Identities=23% Similarity=0.271 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCCCCc-cchHHhHHhhcCCCCCCCC-chhhhcccccCCCCCCCeEEEeeCCC-CCCCCCCCCCC-CCCCH
Q 017731 35 GPTKVILITGLAGTH-DAWGPQLKGLAGTDKPNDD-DETILQDSVESGDGGAGIEVCAFDNR-GMGRSSVPVKK-TEYTT 110 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~g~~vi~~D~~-G~G~S~~~~~~-~~~~~ 110 (367)
.+|..+++.|.++.+ .-|..+ +++...--.+.+ +.|.+| ...++.+|.| |.|.|-..... ...+.
T Consensus 30 ~~pl~lwlqGgpGaSstG~GNF-eE~GPl~~~~~~r~~TWlk----------~adllfvDnPVGaGfSyVdg~~~Y~~~~ 98 (414)
T KOG1283|consen 30 ERPLALWLQGGPGASSTGFGNF-EELGPLDLDGSPRDWTWLK----------DADLLFVDNPVGAGFSYVDGSSAYTTNN 98 (414)
T ss_pred CCCeeEEecCCCCCCCcCccch-hhcCCcccCCCcCCchhhh----------hccEEEecCCCcCceeeecCcccccccH
Confidence 567788999886654 333322 222110000001 222222 3567788876 78888654431 23357
Q ss_pred HHHHHHHHHHHHHh-------CCceEEEEEeChhHHHHHHHHHhCCc---------ceeEEEEecc
Q 017731 111 KIMAKDVIALMDHL-------GWKQAHVFGHSMGAMIACKLAAMVPE---------RVLSLALLNV 160 (367)
Q Consensus 111 ~~~~~dl~~~l~~~-------~~~~v~lvGhS~Gg~~a~~~a~~~p~---------~v~~lvl~~~ 160 (367)
++.+.|+.++++.+ ...|++|+.-|.||-++..++...-+ .+.+++|-++
T Consensus 99 ~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDS 164 (414)
T KOG1283|consen 99 KQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDS 164 (414)
T ss_pred HHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCc
Confidence 88899999999865 33589999999999999998875322 3556666554
No 233
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=90.85 E-value=1.5 Score=39.82 Aligned_cols=62 Identities=10% Similarity=0.042 Sum_probs=47.1
Q ss_pred HhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccccChHHHHHHHHHHHhhhc
Q 017731 258 RSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHERTEEVNQALIDLIKASE 322 (367)
Q Consensus 258 ~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e~p~~~~~~i~~fl~~~~ 322 (367)
.++.+|-.++.|..|.+.++..+.-+.+.++....+..+|+ .|...-. .+.+.|..|+++..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~---~i~esl~~flnrfq 388 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLNRFQ 388 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHHHHh
Confidence 45678999999999999999999999998855667888898 8876433 44555566666544
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.40 E-value=0.46 Score=43.50 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHh
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
..+.+++..+++....-++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677888888888886689999999999999988864
No 235
>PLN02847 triacylglycerol lipase
Probab=89.82 E-value=0.6 Score=45.26 Aligned_cols=26 Identities=27% Similarity=0.332 Sum_probs=20.4
Q ss_pred HHhCCceEEEEEeChhHHHHHHHHHh
Q 017731 122 DHLGWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 122 ~~~~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
+....-+++++|||+||.+|..++..
T Consensus 246 ~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 246 DEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHCCCCeEEEeccChHHHHHHHHHHH
Confidence 33333479999999999999988764
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.67 E-value=1.4 Score=37.74 Aligned_cols=64 Identities=19% Similarity=0.168 Sum_probs=39.9
Q ss_pred CeEEEeeCCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhC
Q 017731 85 GIEVCAFDNRGM-GR-SSVPVKKTEYTTKIMAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 85 g~~vi~~D~~G~-G~-S~~~~~~~~~~~~~~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
|+.+..+++|.. +- +.........+..+=++.+.+.++.. ..++++++|+|+||.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 667777777751 11 00111112345666666676666652 236899999999999999887653
No 237
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=80.84 E-value=3.8 Score=35.96 Aligned_cols=30 Identities=23% Similarity=0.211 Sum_probs=23.3
Q ss_pred HHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333344468999999999999998888764
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=80.84 E-value=3.8 Score=35.96 Aligned_cols=30 Identities=23% Similarity=0.211 Sum_probs=23.3
Q ss_pred HHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
+.+.....++.+-|||+||.+|..+..++.
T Consensus 269 v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 269 VRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHhCCCceEEEeccccchHHHHHhccccC
Confidence 333344468999999999999998888764
No 239
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=79.15 E-value=38 Score=31.27 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=58.3
Q ss_pred eEEEEcCCCCCc-------cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCH
Q 017731 38 KVILITGLAGTH-------DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTT 110 (367)
Q Consensus 38 ~vv~lHG~~~~~-------~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~ 110 (367)
.||++||-+.++ +.|..+++.+.+ .-.+..+|.--.|..+ .+
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~-----------------------r~lip~~D~AYQGF~~--------Gl 221 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKE-----------------------RGLIPFFDIAYQGFAD--------GL 221 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHH-----------------------cCCeeeeehhhhhhcc--------ch
Confidence 599999876543 678888888887 3355667876666543 24
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
++-+.-++.++... +-.+|..|..=.+++ |.+||.++.+++..
T Consensus 222 eeDa~~lR~~a~~~---~~~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 222 EEDAYALRLFAEVG---PELLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred HHHHHHHHHHHHhC---CcEEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 55555565555543 238888888766544 77999999999754
No 240
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=78.32 E-value=3.9 Score=33.89 Aligned_cols=60 Identities=18% Similarity=0.215 Sum_probs=42.9
Q ss_pred CccEEEEeecCCccCcHHHHHHHHHHh---cC-CcEEEEcCC-CCcccccC---hHHHHHHHHHHHhh
Q 017731 261 GFLVSVIHGRHDVIAQICYARRLAEKL---YP-VARMIDLPG-GHLVSHER---TEEVNQALIDLIKA 320 (367)
Q Consensus 261 ~~Pvlii~G~~D~~~p~~~~~~~~~~~---~~-~~~~~~~~g-gH~~~~e~---p~~~~~~i~~fl~~ 320 (367)
+++++-|-|+.|.++.+.......+.+ ++ ....++.+| ||+-...- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 467888999999999987665555543 22 234566678 99876653 36788888888865
No 241
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=77.64 E-value=5.3 Score=38.50 Aligned_cols=78 Identities=18% Similarity=0.065 Sum_probs=53.2
Q ss_pred CCeEEEeeCCCCCCCCCCC-CCCCCCCHH-----------HHHHHHHHHHHHh-C--CceEEEEEeChhHHHHHHHHHhC
Q 017731 84 AGIEVCAFDNRGMGRSSVP-VKKTEYTTK-----------IMAKDVIALMDHL-G--WKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~-~~~~~~~~~-----------~~~~dl~~~l~~~-~--~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+||.++.-|- ||..+... ......+.+ +.+..-+++++.+ + .+.-+..|.|.||..++..|.+|
T Consensus 58 ~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQry 136 (474)
T PF07519_consen 58 RGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRY 136 (474)
T ss_pred cCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhC
Confidence 3999999996 77666431 111122322 2222233444433 3 34678999999999999999999
Q ss_pred CcceeEEEEeccCC
Q 017731 149 PERVLSLALLNVTG 162 (367)
Q Consensus 149 p~~v~~lvl~~~~~ 162 (367)
|+.++|++.-+|..
T Consensus 137 P~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 137 PEDFDGILAGAPAI 150 (474)
T ss_pred hhhcCeEEeCCchH
Confidence 99999999988863
No 242
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=76.51 E-value=74 Score=30.56 Aligned_cols=103 Identities=22% Similarity=0.271 Sum_probs=63.9
Q ss_pred EEEEEecC-CCCeEEEEcCCCCCccchH--HhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEee-CCCCCCCCCCC
Q 017731 27 IFYRTYGR-GPTKVILITGLAGTHDAWG--PQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAF-DNRGMGRSSVP 102 (367)
Q Consensus 27 l~~~~~g~-~~p~vv~lHG~~~~~~~~~--~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~-D~~G~G~S~~~ 102 (367)
++|...|+ .+|..|..-|+-. .+-|. .+++.| |...+.+ |.|=-|.+=..
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L-------------------------g~PfLL~~DpRleGGaFYl 332 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL-------------------------GAPFLLIGDPRLEGGAFYL 332 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc-------------------------CCCeEEeeccccccceeee
Confidence 44556676 4556888888855 44443 234444 3444444 88866665321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCc--eEEEEEeChhHHHHHHHHHhCCcceeEEEEec
Q 017731 103 VKKTEYTTKIMAKDVIALMDHLGWK--QAHVFGHSMGAMIACKLAAMVPERVLSLALLN 159 (367)
Q Consensus 103 ~~~~~~~~~~~~~dl~~~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~ 159 (367)
.. ..+ -+...+.|.+.++.+|.+ .++|-|-|||..-|+.+++... -.++|+--
T Consensus 333 Gs-~ey-E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgK 387 (511)
T TIGR03712 333 GS-DEY-EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGK 387 (511)
T ss_pred Cc-HHH-HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcC
Confidence 11 112 344556667778888875 5999999999999999998742 24455433
No 243
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=71.90 E-value=26 Score=25.68 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=45.6
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHH--HHHHHHHhCCcceeEEEE
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM--IACKLAAMVPERVLSLAL 157 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~--~a~~~a~~~p~~v~~lvl 157 (367)
+|+..=.+.++..|.+-...-... ..+.=...+..+++.....++++||-|--.= +-..+|.++|++|.++.+
T Consensus 23 ~~~P~G~~~Lr~~~~~~~~~~~~~-~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 23 NGFPAGPLLLRDYGPSLSGLFKSG-AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred cCCCCCceEcccCCccccccccCC-chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 356555566665544432110011 1123456778888888888999999886543 334567889999988754
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=70.56 E-value=9.2 Score=36.53 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.2
Q ss_pred hCCceEEEEEeChhHHHHHHHHHh-----CCcceeEEEEeccC
Q 017731 124 LGWKQAHVFGHSMGAMIACKLAAM-----VPERVLSLALLNVT 161 (367)
Q Consensus 124 ~~~~~v~lvGhS~Gg~~a~~~a~~-----~p~~v~~lvl~~~~ 161 (367)
.|.+|+.|||+|+|+.+.+..... .-..|..+++++.+
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaP 486 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAP 486 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCC
Confidence 477899999999999999866552 12358899999876
No 245
>PRK12467 peptide synthase; Provisional
Probab=69.50 E-value=19 Score=44.53 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 35 GPTKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
..+.+++.|...++...+.++...|.. +..++.+..++.-.... ...++++++
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~~-----------------------~~~~~~l~~~~~~~d~~----~~~~~~~~~ 3743 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILEG-----------------------DRHVLGLTCRHLLDDGW----QDTSLQAMA 3743 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhCC-----------------------CCcEEEEeccccccccC----CccchHHHH
Confidence 345699999998888888888887765 67888887765432222 133566677
Q ss_pred HHHHHHHHHhC-CceEEEEEeChhHHHHHHHHHh---CCcceeEEEEecc
Q 017731 115 KDVIALMDHLG-WKQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNV 160 (367)
Q Consensus 115 ~dl~~~l~~~~-~~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~ 160 (367)
......+.... ..+..+.|+|+||.++..++.. ..+.+.-+.++..
T Consensus 3744 ~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3744 VQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHHcCCceeEEEEEec
Confidence 76666665543 3578999999999999988764 3455666656544
No 246
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=66.00 E-value=14 Score=35.89 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=54.4
Q ss_pred eEEEEcCCCC---CccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHH
Q 017731 38 KVILITGLAG---THDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMA 114 (367)
Q Consensus 38 ~vv~lHG~~~---~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 114 (367)
.|+-+||.|. ++..-.+..+.++.. -|..|+.+|+- -.+........++.-
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~a---------------------L~cPiiSVdYS-----LAPEaPFPRaleEv~ 451 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQA---------------------LGCPIISVDYS-----LAPEAPFPRALEEVF 451 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHH---------------------hCCCeEEeeec-----cCCCCCCCcHHHHHH
Confidence 4777898874 233333444444432 27899999973 222221222333322
Q ss_pred HHHHHHH---HHhCC--ceEEEEEeChhHHHHHHHHHhC----CcceeEEEEeccC
Q 017731 115 KDVIALM---DHLGW--KQAHVFGHSMGAMIACKLAAMV----PERVLSLALLNVT 161 (367)
Q Consensus 115 ~dl~~~l---~~~~~--~~v~lvGhS~Gg~~a~~~a~~~----p~~v~~lvl~~~~ 161 (367)
-...-++ ..+|. ++|+++|-|.||.+.+..|.+- -..-+|+++.-++
T Consensus 452 fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 452 FAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred HHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 2222222 23443 6899999999999877766542 1224677776654
No 247
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=65.88 E-value=65 Score=28.59 Aligned_cols=39 Identities=23% Similarity=0.296 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHH-HHh-CCceEEEEEeChhHHHHHHHHHh
Q 017731 109 TTKIMAKDVIALM-DHL-GWKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 109 ~~~~~~~dl~~~l-~~~-~~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
.+++.+.+....+ +.. ..+++.++|+|-||.+|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3444444433333 444 33579999999999999999865
No 248
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.96 E-value=6.9 Score=35.51 Aligned_cols=30 Identities=33% Similarity=0.459 Sum_probs=23.4
Q ss_pred HHHHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 117 l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+.++++..|+++-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 345567789999999999999887776554
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=58.21 E-value=12 Score=33.45 Aligned_cols=28 Identities=32% Similarity=0.495 Sum_probs=22.8
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+++...|+++-.++|||+|-..|+.++.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 4556778999999999999988876654
No 250
>COG3933 Transcriptional antiterminator [Transcription]
Probab=57.70 E-value=49 Score=31.26 Aligned_cols=74 Identities=11% Similarity=0.152 Sum_probs=57.4
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDV 117 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl 117 (367)
.||+.||....+ ....++..|.+ .--+.++|+| .+.++.+..+.+
T Consensus 111 vIiiAHG~sTAS-SmaevanrLL~-----------------------~~~~~aiDMP-----------Ldvsp~~vle~l 155 (470)
T COG3933 111 VIIIAHGYSTAS-SMAEVANRLLG-----------------------EEIFIAIDMP-----------LDVSPSDVLEKL 155 (470)
T ss_pred EEEEecCcchHH-HHHHHHHHHhh-----------------------ccceeeecCC-----------CcCCHHHHHHHH
Confidence 699999986544 45566777765 4578899998 567899999999
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
.+.+++.+..+=+++=-.||....+.-..
T Consensus 156 ~e~~k~~~~~~GlllLVDMGSL~~f~~~i 184 (470)
T COG3933 156 KEYLKERDYRSGLLLLVDMGSLTSFGSII 184 (470)
T ss_pred HHHHHhcCccCceEEEEecchHHHHHHHH
Confidence 99999988777567777999988876544
No 251
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=56.79 E-value=44 Score=27.51 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCCCccc--hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC--CCCCCCCCCCCCCCCCH
Q 017731 35 GPTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN--RGMGRSSVPVKKTEYTT 110 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~--~G~G~S~~~~~~~~~~~ 110 (367)
.++.+|++.|+.++... -..+.+.|.+ +|++++..|= .=||.+.. ..++-
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~----------------------~G~~~y~LDGDnvR~gL~~d----LgFs~ 74 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFA----------------------KGYHVYLLDGDNVRHGLNRD----LGFSR 74 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHH----------------------cCCeEEEecChhHhhcccCC----CCCCh
Confidence 34579999999888743 3455566666 7999999972 22454432 35566
Q ss_pred HHHHHHHHHH
Q 017731 111 KIMAKDVIAL 120 (367)
Q Consensus 111 ~~~~~dl~~~ 120 (367)
++-.+.+..+
T Consensus 75 edR~eniRRv 84 (197)
T COG0529 75 EDRIENIRRV 84 (197)
T ss_pred HHHHHHHHHH
Confidence 6666665544
No 252
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=56.02 E-value=14 Score=33.09 Aligned_cols=29 Identities=24% Similarity=0.147 Sum_probs=23.0
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHHH
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
.+++...|+++..++|||+|=..|+.++.
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 34556778899999999999988877654
No 253
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=53.95 E-value=14 Score=35.35 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=38.5
Q ss_pred ccEEEEeecCCccCcHHHHHHHHHHh------cCCcEEEEcCCCCcccccChHHHHHHHHHHHhh
Q 017731 262 FLVSVIHGRHDVIAQICYARRLAEKL------YPVARMIDLPGGHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 262 ~Pvlii~G~~D~~~p~~~~~~~~~~~------~~~~~~~~~~ggH~~~~e~p~~~~~~i~~fl~~ 320 (367)
.+++..+|=.|..+|+.....-.+.+ .....+.++++||+++.++|+...+.+..|+..
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 34555555555555544333222222 123456778899999999999999999988866
No 254
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=51.81 E-value=1.6e+02 Score=27.76 Aligned_cols=100 Identities=19% Similarity=0.232 Sum_probs=61.1
Q ss_pred EEEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCC--------CC--
Q 017731 39 VILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKK--------TE-- 107 (367)
Q Consensus 39 vv~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~--------~~-- 107 (367)
|+++ |...++ +.+..+.+.+.+ .|..++.+|.-=.|.+....+- ..
T Consensus 4 I~ii-gT~DTK~~E~~yl~~~i~~----------------------~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~ 60 (403)
T PF06792_consen 4 IAII-GTLDTKGEELLYLRDQIEA----------------------QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDS 60 (403)
T ss_pred EEEE-EccCCCHHHHHHHHHHHHH----------------------CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCC
Confidence 4444 444444 566777777777 6999999997444433322110 00
Q ss_pred -----------CCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 108 -----------YTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 108 -----------~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
..++.+++-+..++..+ .+.-++-+|.|.|..++.......|--+-++++--..
T Consensus 61 ~~~~~~~~dRg~ai~~M~~ga~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST~A 129 (403)
T PF06792_consen 61 IEAVRSSGDRGEAIEAMARGAARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVSTMA 129 (403)
T ss_pred hHHhhccCCHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEEccC
Confidence 11333444444444444 2345788999999999999999888777777664443
No 255
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=51.27 E-value=17 Score=32.31 Aligned_cols=29 Identities=28% Similarity=0.318 Sum_probs=22.3
Q ss_pred HHHHHhC-CceEEEEEeChhHHHHHHHHHh
Q 017731 119 ALMDHLG-WKQAHVFGHSMGAMIACKLAAM 147 (367)
Q Consensus 119 ~~l~~~~-~~~v~lvGhS~Gg~~a~~~a~~ 147 (367)
.++...| +.+..++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 4455666 8899999999999887776543
No 256
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=51.11 E-value=49 Score=27.79 Aligned_cols=64 Identities=16% Similarity=0.225 Sum_probs=46.3
Q ss_pred Ce-EEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeCh----hHHHHHHHHHhCC-cceeEEEEe
Q 017731 85 GI-EVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSM----GAMIACKLAAMVP-ERVLSLALL 158 (367)
Q Consensus 85 g~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~----Gg~~a~~~a~~~p-~~v~~lvl~ 158 (367)
|. +|+..|.+.. ..++.+.+++.+.++++..+ -.++++|+|. |..++-.+|.+.. ..+..++-+
T Consensus 76 G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 76 GADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 44 6777665432 25678899999999998877 5699999998 8899999888743 244445444
No 257
>PRK02399 hypothetical protein; Provisional
Probab=50.70 E-value=2.2e+02 Score=26.81 Aligned_cols=100 Identities=22% Similarity=0.264 Sum_probs=60.2
Q ss_pred EEEcCCCCCc-cchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCC--------------
Q 017731 40 ILITGLAGTH-DAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVK-------------- 104 (367)
Q Consensus 40 v~lHG~~~~~-~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~-------------- 104 (367)
|++=|...++ +.+..+.+.+.+ +|..|+.+|.-..|....+.+
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~----------------------~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~ 63 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEA----------------------AGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGI 63 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHH----------------------CCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCH
Confidence 4444555554 456666666665 599999999844442211110
Q ss_pred -------CCCCCHHHHHHHHHHHHHHh----CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 105 -------KTEYTTKIMAKDVIALMDHL----GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 105 -------~~~~~~~~~~~dl~~~l~~~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
.....++.+++-...++..+ .+.-++-+|.|.|..++.......|--+-++++--..
T Consensus 64 ~~~~~~~dRg~ai~~M~~ga~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVSTmA 131 (406)
T PRK02399 64 EAVFCGGDRGSAMAAMAEGAAAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVSTMA 131 (406)
T ss_pred HHhhcCccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEEccc
Confidence 00011234444444555433 3456888999999999999999888767777664443
No 258
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=50.62 E-value=21 Score=32.22 Aligned_cols=32 Identities=31% Similarity=0.342 Sum_probs=25.5
Q ss_pred HHHHHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 117 l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.+.++..|+..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 44455556887778899999999999999864
No 259
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=49.87 E-value=24 Score=28.64 Aligned_cols=31 Identities=26% Similarity=0.211 Sum_probs=24.2
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
+.++..++..-.+.|-|.|+.++..++...+
T Consensus 18 ~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 18 KALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 3444457777789999999999999988643
No 260
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=48.92 E-value=65 Score=25.68 Aligned_cols=49 Identities=27% Similarity=0.257 Sum_probs=32.3
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHH
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~ 144 (367)
|-.|++.|.+|- .++.+++++.+..+-+ .|.+=.+++|.|.|=.-++..
T Consensus 67 ~~~vi~Ld~~Gk----------~~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRGK----------ALSSEEFADFLERLRD-DGRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCCC----------cCChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHHHH
Confidence 779999999863 4456667766665543 342335778999985555444
No 261
>PRK10279 hypothetical protein; Provisional
Probab=48.86 E-value=23 Score=31.93 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=25.6
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
.+.++..++..-.+.|-|+|+.++..+|....
T Consensus 24 L~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 24 INALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 34455578888889999999999999997543
No 262
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=47.53 E-value=1e+02 Score=23.03 Aligned_cols=74 Identities=11% Similarity=0.048 Sum_probs=46.5
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCC-CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGA-GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKD 116 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 116 (367)
.||..|| .-.......++.+.. . --.+.++++. ..-+.+++.+.
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G----------------------~~~~~i~~~~~~-----------~~~~~~~~~~~ 46 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILG----------------------EDQDNIEAVDLY-----------PDESIEDFEEK 46 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHT----------------------STCSSEEEEEET-----------TTSCHHHHHHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcC----------------------CCcccEEEEECc-----------CCCCHHHHHHH
Confidence 4788898 444556666777665 2 1245555543 23478899999
Q ss_pred HHHHHHHhCC-ceEEEEEeChhHHHHHHHHH
Q 017731 117 VIALMDHLGW-KQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 117 l~~~l~~~~~-~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+.+.++..+. +.+.++--=.||...-.++.
T Consensus 47 l~~~i~~~~~~~~vlil~Dl~ggsp~n~a~~ 77 (116)
T PF03610_consen 47 LEEAIEELDEGDGVLILTDLGGGSPFNEAAR 77 (116)
T ss_dssp HHHHHHHCCTTSEEEEEESSTTSHHHHHHHH
T ss_pred HHHHHHhccCCCcEEEEeeCCCCccchHHHH
Confidence 9999988864 45666655555554444443
No 263
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=47.01 E-value=27 Score=28.82 Aligned_cols=30 Identities=30% Similarity=0.320 Sum_probs=23.3
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.++..++..-.++|-|.||.++..++...
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334455777778999999999999998753
No 264
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=44.74 E-value=31 Score=30.53 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=25.1
Q ss_pred HHHHHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 117 VIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 117 l~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.+.+++.++..-.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 33445666877778899999999999999764
No 265
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=44.25 E-value=28 Score=31.37 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 116 DVIALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 116 dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
-+.+.++..++..-.+.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 345666777888899999999999999999854
No 266
>PF03283 PAE: Pectinacetylesterase
Probab=43.81 E-value=1.3e+02 Score=27.99 Aligned_cols=33 Identities=30% Similarity=0.262 Sum_probs=22.4
Q ss_pred ceEEEEEeChhHHHHHHHHH----hCCcceeEEEEec
Q 017731 127 KQAHVFGHSMGAMIACKLAA----MVPERVLSLALLN 159 (367)
Q Consensus 127 ~~v~lvGhS~Gg~~a~~~a~----~~p~~v~~lvl~~ 159 (367)
++++|.|.|.||.-++..+. ..|..++-..+.+
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~D 192 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSD 192 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecc
Confidence 57999999999999887654 3564343333333
No 267
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=43.61 E-value=36 Score=29.05 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=22.6
Q ss_pred HHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
.++..+++.-.++|-|.|+.++..+|...
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 33445677778999999999999998654
No 268
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=41.17 E-value=59 Score=31.95 Aligned_cols=78 Identities=22% Similarity=0.420 Sum_probs=44.6
Q ss_pred CCCCCeEEEeeCCCC----CCCCCCCC-CCCCCCHHHHHHHHHHHHHHhCCceEEEEEe------ChhHHHHHHHHHhCC
Q 017731 81 DGGAGIEVCAFDNRG----MGRSSVPV-KKTEYTTKIMAKDVIALMDHLGWKQAHVFGH------SMGAMIACKLAAMVP 149 (367)
Q Consensus 81 ~~~~g~~vi~~D~~G----~G~S~~~~-~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGh------S~Gg~~a~~~a~~~p 149 (367)
+.+.|=.|+.-..-| +|..+.+. .........+...+.+.+.. .++++++|| |.|+.+++...+..-
T Consensus 289 lgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~ 366 (655)
T COG3887 289 LGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMN 366 (655)
T ss_pred hccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhc
Confidence 344566666664333 34433332 11122233333444444444 478999999 789999998766544
Q ss_pred cceeEEEEeccC
Q 017731 150 ERVLSLALLNVT 161 (367)
Q Consensus 150 ~~v~~lvl~~~~ 161 (367)
.+ .+.++++|.
T Consensus 367 ~~-~a~~v~dp~ 377 (655)
T COG3887 367 NK-EAFAVLDPE 377 (655)
T ss_pred cc-ccEEEECcc
Confidence 44 677888864
No 269
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=39.31 E-value=50 Score=29.25 Aligned_cols=51 Identities=18% Similarity=0.078 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhCC---ceEEEEEeChhHHHHHHHHHh---CCcceeEEEEeccCC
Q 017731 112 IMAKDVIALMDHLGW---KQAHVFGHSMGAMIACKLAAM---VPERVLSLALLNVTG 162 (367)
Q Consensus 112 ~~~~dl~~~l~~~~~---~~v~lvGhS~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 162 (367)
.+.+.+.+.+..+.. .+++|.|-|+|+.-+...... .-+++++.++.+++.
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 344444455555533 369999999998766654322 235799999999863
No 270
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=39.06 E-value=63 Score=25.87 Aligned_cols=61 Identities=18% Similarity=0.151 Sum_probs=34.2
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
+-.+++.|-.|- .++-+++++.+..+...-..+=++++|.+.|=. -.+-. +.+..+.+++.
T Consensus 67 ~~~~i~Ld~~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~--~~~~~----~a~~~lSLS~m 127 (155)
T PF02590_consen 67 NDYVILLDERGK----------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGLS--EEVRK----RADEKLSLSKM 127 (155)
T ss_dssp TSEEEEE-TTSE----------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB----HHHHH----H-SEEEES-SS
T ss_pred CCEEEEEcCCCc----------cCChHHHHHHHHHHHhcCCceEEEEEecCCCCC--HHHHh----hcCceEEEecC
Confidence 677899998764 456778888888777653323467899999832 22222 23455666654
No 271
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=38.41 E-value=46 Score=27.03 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=23.2
Q ss_pred HHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
.++..+...-.+.|-|.|+.++..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334456666788999999999999987654
No 272
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=38.34 E-value=34 Score=33.57 Aligned_cols=31 Identities=19% Similarity=0.216 Sum_probs=24.9
Q ss_pred HHHH-HHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 118 IALM-DHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 118 ~~~l-~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
.+++ +..|+++-.++|||+|=..|+..|--.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 578999999999999998888877654
No 273
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=38.16 E-value=43 Score=28.36 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=24.8
Q ss_pred HHHHHHhCCceEEEEEeChhHHHHHHHHHhCC
Q 017731 118 IALMDHLGWKQAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 118 ~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
.+.+...+...-.+.|.|.|+..+..++...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33444557666688999999999999998764
No 274
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=37.63 E-value=1e+02 Score=27.47 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=44.0
Q ss_pred CeEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC--------CCCCC-----CC
Q 017731 37 TKVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM--------GRSSV-----PV 103 (367)
Q Consensus 37 p~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~--------G~S~~-----~~ 103 (367)
|-|+|.-|.++ .++.|+. .||.|+..|+--- |..-. .+
T Consensus 253 Pmi~fakG~g~-------~Le~l~~----------------------tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP 303 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQ----------------------TGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDP 303 (359)
T ss_pred ceEEEEcCcch-------HHHHHHh----------------------cCCcEEeecccccHHHHHHhhCCceEEecCCCh
Confidence 66888877654 4677777 5999999997421 11100 00
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCceEEE-EEeC
Q 017731 104 KKTEYTTKIMAKDVIALMDHLGWKQAHV-FGHS 135 (367)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~~~~v~l-vGhS 135 (367)
....-+.+.+.+.+.+.++..|.++.++ +||-
T Consensus 304 ~~ly~s~e~it~~v~~mv~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 304 GVLYGSKEEITQLVKQMVKDFGKSRYIANLGHG 336 (359)
T ss_pred HHhcCCHHHHHHHHHHHHHHhCccceEEecCCC
Confidence 0012356777888889999998665443 6774
No 275
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=35.36 E-value=21 Score=28.66 Aligned_cols=49 Identities=20% Similarity=0.308 Sum_probs=28.6
Q ss_pred eCCCCCCCCCCCC-CCCCCCHHHHHHHH----HHHHHHhC----CceEEEEEeChhHH
Q 017731 91 FDNRGMGRSSVPV-KKTEYTTKIMAKDV----IALMDHLG----WKQAHVFGHSMGAM 139 (367)
Q Consensus 91 ~D~~G~G~S~~~~-~~~~~~~~~~~~dl----~~~l~~~~----~~~v~lvGhS~Gg~ 139 (367)
|-+-|||...... ....++.++++.-+ ..+.+..+ .++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3345899882211 11466888898888 44444442 35799999999877
No 276
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=35.16 E-value=1.3e+02 Score=24.07 Aligned_cols=45 Identities=27% Similarity=0.337 Sum_probs=29.6
Q ss_pred CeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHH
Q 017731 85 GIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~ 139 (367)
+-.+|+.|-+|- .++-+++++.+......-..+-++++|.+.|=.
T Consensus 67 ~~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~ 111 (157)
T PRK00103 67 GARVIALDERGK----------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLS 111 (157)
T ss_pred CCEEEEEcCCCC----------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccC
Confidence 456899998763 446677788777763332224567889888743
No 277
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=34.74 E-value=89 Score=25.32 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=45.0
Q ss_pred EEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 017731 40 ILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIA 119 (367)
Q Consensus 40 v~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~ 119 (367)
|++-|.|++...-+.++.+|..+++...+ ++..++...--.=.+. -..+|.++.. ...
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf~~eR~----------------~lpaIaLt~dsS~lTa---i~NDy~yd~v---FsR 101 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRFEKERP----------------SLPAIALSTDSSVLTA---IANDYGYDEV---FSR 101 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHHHhcCC----------------CCCeeEeecccHHHhh---hhccccHHHH---HHH
Confidence 56779999998889999999884433322 5555554311000000 1134555433 234
Q ss_pred HHHHhCCceEEEEEeChhHH
Q 017731 120 LMDHLGWKQAHVFGHSMGAM 139 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~ 139 (367)
.+++++..-=+|+|.|-.|.
T Consensus 102 qveA~g~~GDvLigISTSGN 121 (176)
T COG0279 102 QVEALGQPGDVLIGISTSGN 121 (176)
T ss_pred HHHhcCCCCCEEEEEeCCCC
Confidence 45566655568888888774
No 278
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=34.65 E-value=65 Score=26.06 Aligned_cols=30 Identities=27% Similarity=0.279 Sum_probs=22.7
Q ss_pred HHHHHhCCceEEEEEeChhHHHHHHHHHhC
Q 017731 119 ALMDHLGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 119 ~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.++..+...-.+.|-|.|+.++..++...
T Consensus 20 ~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 334445666678999999999999998653
No 279
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=33.09 E-value=69 Score=29.00 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=16.1
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 017731 130 HVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 130 ~lvGhS~Gg~~a~~~a~~~ 148 (367)
.+.|-|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5779999999999998643
No 280
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=31.95 E-value=65 Score=30.27 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=38.5
Q ss_pred HhHhcCccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCccccc-----ChHHHHHHHHHHHhh
Q 017731 256 TIRSAGFLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSHE-----RTEEVNQALIDLIKA 320 (367)
Q Consensus 256 ~l~~i~~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~e-----~p~~~~~~i~~fl~~ 320 (367)
-++.-.-.+++|+|++|++.-. .-.+.+. ..++.+.+.|| +|..-.. +.++....|.+|-.-
T Consensus 346 Wvr~~~~rmlFVYG~nDPW~A~--~f~l~~g-~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaGv 413 (448)
T PF05576_consen 346 WVRNNGPRMLFVYGENDPWSAE--PFRLGKG-KRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAGV 413 (448)
T ss_pred HHHhCCCeEEEEeCCCCCcccC--ccccCCC-CcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcCC
Confidence 3455567899999999998632 1112211 24667777788 8965543 345566667777653
No 281
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=31.87 E-value=74 Score=22.03 Aligned_cols=25 Identities=36% Similarity=0.391 Sum_probs=18.7
Q ss_pred hCCceEEEEEeChhHHHHHHHHHhC
Q 017731 124 LGWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 124 ~~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
-+.+++.++|-|-|=.+|.+.++.+
T Consensus 37 ~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 37 NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCCceEEEEecCCcccHHHHHHHHh
Confidence 3557899999999988887777765
No 282
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=31.57 E-value=1.2e+02 Score=30.19 Aligned_cols=34 Identities=12% Similarity=-0.108 Sum_probs=26.8
Q ss_pred EEEEEeChhHHHHHHHHHhCC-cceeEEEEeccCC
Q 017731 129 AHVFGHSMGAMIACKLAAMVP-ERVLSLALLNVTG 162 (367)
Q Consensus 129 v~lvGhS~Gg~~a~~~a~~~p-~~v~~lvl~~~~~ 162 (367)
++.-+.|-||..++..|.+.- ..|++++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 344589999999999998754 4699999888754
No 283
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=30.93 E-value=4.1e+02 Score=25.10 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=40.7
Q ss_pred eEEEEcCCCCC---ccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC---CCCCCCCCCCCCCHH
Q 017731 38 KVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM---GRSSVPVKKTEYTTK 111 (367)
Q Consensus 38 ~vv~lHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~ 111 (367)
++|+++.+... +.....-+..|.+ .|+.|+-++ +|+ |..... .--+++
T Consensus 118 pvvi~Pamn~~m~~~p~~~~Nl~~L~~----------------------~G~~ii~P~-~g~la~~~~g~g---r~~~~~ 171 (399)
T PRK05579 118 PVLVAPAMNTQMWENPATQRNLATLRS----------------------RGVEIIGPA-SGRLACGDVGPG---RMAEPE 171 (399)
T ss_pred CEEEEeCCChhHcCCHHHHHHHHHHHH----------------------CCCEEECCC-CccccCCCcCCC---CCCCHH
Confidence 47777755322 2234556667776 588888664 343 222211 234677
Q ss_pred HHHHHHHHHHHH--hCCceEEEEEe
Q 017731 112 IMAKDVIALMDH--LGWKQAHVFGH 134 (367)
Q Consensus 112 ~~~~dl~~~l~~--~~~~~v~lvGh 134 (367)
+.++.+...+.. +..+++.+-|-
T Consensus 172 ~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 172 EIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHHHHHhhhcccCCCEEEEeCC
Confidence 777777776643 33356777776
No 284
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=30.08 E-value=46 Score=31.59 Aligned_cols=32 Identities=19% Similarity=0.258 Sum_probs=24.4
Q ss_pred HHHhCCceEEEEEeChhHHHHHHHHHhCCcce
Q 017731 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (367)
Q Consensus 121 l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v 152 (367)
+...++.+-++.|-|.|+.+|..++...++.+
T Consensus 95 L~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 95 LFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33446666789999999999999998765543
No 285
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=29.48 E-value=4.4e+02 Score=24.09 Aligned_cols=72 Identities=21% Similarity=0.251 Sum_probs=41.1
Q ss_pred CeEEEeeCCCCCCCCCCCCC--------------CCCCCHHHHHHHHHH-HHHHh-CCceEEEEEeChhHHHHHHHHHhC
Q 017731 85 GIEVCAFDNRGMGRSSVPVK--------------KTEYTTKIMAKDVIA-LMDHL-GWKQAHVFGHSMGAMIACKLAAMV 148 (367)
Q Consensus 85 g~~vi~~D~~G~G~S~~~~~--------------~~~~~~~~~~~dl~~-~l~~~-~~~~v~lvGhS~Gg~~a~~~a~~~ 148 (367)
+.+++++=-+|.|.-.-... ...+++.+.++.... ++++. ..++|+++|+|-|+.++--+|..
T Consensus 64 ~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm- 142 (423)
T COG3673 64 GVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM- 142 (423)
T ss_pred CceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH-
Confidence 67777776678775521110 011122222222222 23333 23689999999999999888875
Q ss_pred CcceeEEEEecc
Q 017731 149 PERVLSLALLNV 160 (367)
Q Consensus 149 p~~v~~lvl~~~ 160 (367)
|+.+-+++-
T Consensus 143 ---ir~vGlls~ 151 (423)
T COG3673 143 ---IRHVGLLSR 151 (423)
T ss_pred ---HHHhhhhcc
Confidence 455555553
No 286
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.84 E-value=79 Score=27.70 Aligned_cols=31 Identities=23% Similarity=0.153 Sum_probs=22.9
Q ss_pred HHHHhCCc-eEEEEEeChhHHHHHHHHHhCCc
Q 017731 120 LMDHLGWK-QAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 120 ~l~~~~~~-~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
.+...++. .=.++|-|.||.++..++...+.
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33444555 44789999999999999987544
No 287
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=28.05 E-value=57 Score=30.58 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=25.8
Q ss_pred HHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeE
Q 017731 120 LMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLS 154 (367)
Q Consensus 120 ~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~ 154 (367)
.+...|..+-++.|-|.|+.+|..+|...++.+..
T Consensus 104 aL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 104 ALWLRGLLPRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred HHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 34445666778999999999999999865554433
No 288
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=27.22 E-value=67 Score=30.39 Aligned_cols=58 Identities=16% Similarity=0.083 Sum_probs=40.8
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEEEE
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSLAL 157 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl 157 (367)
.|..|+++- ..+.+++.+.+...++..+.++-+++ .-||.++..+...+|+....++-
T Consensus 84 ~gi~v~a~~--------------~~~~~~y~~~~~~~l~~~~~~p~~i~--DdGg~~~~~~~~~~~~~~~~~~G 141 (413)
T cd00401 84 AGIPVFAWK--------------GETLEEYWWCIEQALKFPDGEPNMIL--DDGGDLTLLIHKKHPELLPGIRG 141 (413)
T ss_pred cCceEEEEc--------------CCCHHHHHHHHHHHHhccCCCCcEEE--ecchHHHHHHHhhhhhhhhccEE
Confidence 699999873 23567777788888887554665555 88999888887777765444443
No 289
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=26.16 E-value=3.4e+02 Score=24.78 Aligned_cols=77 Identities=10% Similarity=-0.012 Sum_probs=48.8
Q ss_pred EEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCC--eEEEeeCCCCCCCCCCC--------------C
Q 017731 40 ILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAG--IEVCAFDNRGMGRSSVP--------------V 103 (367)
Q Consensus 40 v~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g--~~vi~~D~~G~G~S~~~--------------~ 103 (367)
|+++|+|+-......+++.+.. .. ..|+.++ |+-.+-.. .
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~----------------------~~~~~~~vvvn--Gy~p~~~~k~il~~I~~~l~~~~ 112 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLS----------------------DWGDGPVVVVN--GYFPSLSIKDILNTIEEALLPEP 112 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhh----------------------ccCCCcEEEEE--ccCCCCcHHHHHHHHHHHHhhhc
Confidence 6889999988888888887665 12 7778777 33211100 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhC-CceEEEEEeChhHHH
Q 017731 104 KKTEYTTKIMAKDVIALMDHLG-WKQAHVFGHSMGAMI 140 (367)
Q Consensus 104 ~~~~~~~~~~~~dl~~~l~~~~-~~~v~lvGhS~Gg~~ 140 (367)
....-+..+.++.+.+.++... ..+++|+=|++=|..
T Consensus 113 ~~~~~~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 113 SKKPKSPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred ccccCCHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 1122345556666666666654 468999999987765
No 290
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=26.11 E-value=50 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=20.5
Q ss_pred cCCCCeEEEEcCCCCCccch--HHhHHhhcC
Q 017731 33 GRGPTKVILITGLAGTHDAW--GPQLKGLAG 61 (367)
Q Consensus 33 g~~~p~vv~lHG~~~~~~~~--~~~~~~L~~ 61 (367)
.+.+|.|+-+||+.|++..| +-+++.|-.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~ 79 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYK 79 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHh
Confidence 35678899999999998766 334455443
No 291
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=25.76 E-value=64 Score=29.27 Aligned_cols=30 Identities=17% Similarity=0.246 Sum_probs=22.5
Q ss_pred HHHhCCceEEEEEeChhHHHHHHHHHhCCc
Q 017731 121 MDHLGWKQAHVFGHSMGAMIACKLAAMVPE 150 (367)
Q Consensus 121 l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 150 (367)
+...+..+-++.|-|.|+.+|..++...++
T Consensus 90 L~e~gl~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 90 LVEHQLLPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 334466777899999999999988875443
No 292
>COG0218 Predicted GTPase [General function prediction only]
Probab=25.68 E-value=97 Score=25.97 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=37.4
Q ss_pred HHhHhcCccEEEEeecCCccCcHHHH---HHHHHHh--cCCcE--EEEcCC-CCcccccChHHHHHHHHHHHhh
Q 017731 255 QTIRSAGFLVSVIHGRHDVIAQICYA---RRLAEKL--YPVAR--MIDLPG-GHLVSHERTEEVNQALIDLIKA 320 (367)
Q Consensus 255 ~~l~~i~~Pvlii~G~~D~~~p~~~~---~~~~~~~--~~~~~--~~~~~g-gH~~~~e~p~~~~~~i~~fl~~ 320 (367)
+.+...++|++++.-..|.+-..+.. ....+.+ .+... ++.++. .... -++..+.|.+++..
T Consensus 129 ~~l~~~~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~~ 198 (200)
T COG0218 129 EFLLELGIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLKE 198 (200)
T ss_pred HHHHHcCCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhhc
Confidence 44566778999999999999875554 3334333 12222 444443 2221 46777777777754
No 293
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=25.66 E-value=73 Score=27.87 Aligned_cols=15 Identities=27% Similarity=0.700 Sum_probs=12.2
Q ss_pred CCceEEEEEeChhHH
Q 017731 125 GWKQAHVFGHSMGAM 139 (367)
Q Consensus 125 ~~~~v~lvGhS~Gg~ 139 (367)
..+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 446899999999964
No 294
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.20 E-value=62 Score=30.59 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcceeEE
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERVLSL 155 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~l 155 (367)
-.+.++. ..+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 84 GVlkaL~-e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 84 GVVKALL-DADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHH-hCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3343443 346667789999999999999998666555444
No 295
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.78 E-value=1e+02 Score=26.45 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=22.2
Q ss_pred HHHHhCCc--eEEEEEeChhHHHHHHHHHhCC
Q 017731 120 LMDHLGWK--QAHVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 120 ~l~~~~~~--~v~lvGhS~Gg~~a~~~a~~~p 149 (367)
.+...++. .-.+.|-|.|+.++..++...+
T Consensus 20 ~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 20 LLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 33344554 3479999999999999988643
No 296
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=24.46 E-value=2.5e+02 Score=23.87 Aligned_cols=18 Identities=28% Similarity=0.477 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhCCceEEE
Q 017731 114 AKDVIALMDHLGWKQAHV 131 (367)
Q Consensus 114 ~~dl~~~l~~~~~~~v~l 131 (367)
++++.+.++.-+++.++|
T Consensus 181 ~d~vi~~l~~~~~~~v~L 198 (265)
T COG4822 181 VDTVIEYLRKNGIKEVHL 198 (265)
T ss_pred HHHHHHHHHHcCCceEEE
Confidence 345555555556555444
No 297
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=24.43 E-value=4.8e+02 Score=24.56 Aligned_cols=94 Identities=17% Similarity=0.156 Sum_probs=53.1
Q ss_pred eEEEEcCCCCC---ccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCC---CCCCCCCCCCCCCHH
Q 017731 38 KVILITGLAGT---HDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGM---GRSSVPVKKTEYTTK 111 (367)
Q Consensus 38 ~vv~lHG~~~~---~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~---G~S~~~~~~~~~~~~ 111 (367)
++|+++-+... +......+..|.+ .|+.|+-+.. |+ |..... ..-+++
T Consensus 114 plviaPamn~~m~~~p~~~~Nl~~L~~----------------------~G~~vv~P~~-g~~ac~~~g~g---~~~~~~ 167 (390)
T TIGR00521 114 PIILAPAMNENMYNNPAVQENIKRLKD----------------------DGYIFIEPDS-GLLACGDEGKG---RLAEPE 167 (390)
T ss_pred CEEEEeCCChhhcCCHHHHHHHHHHHH----------------------CCcEEECCCC-cccccccccCC---CCCCHH
Confidence 47777764332 2244566677776 5887766652 32 322211 234678
Q ss_pred HHHHHHHHHHHH---hCCceEEEEEe------------------ChhHHHHHHHHHhCCcceeEEEEeccC
Q 017731 112 IMAKDVIALMDH---LGWKQAHVFGH------------------SMGAMIACKLAAMVPERVLSLALLNVT 161 (367)
Q Consensus 112 ~~~~dl~~~l~~---~~~~~v~lvGh------------------S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 161 (367)
++++.+...+.. +..+++.+.|. .+|..++..++.+- ..++++.+.
T Consensus 168 ~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g~ 234 (390)
T TIGR00521 168 TIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITGP 234 (390)
T ss_pred HHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCCC
Confidence 888888777644 44456666666 35566666665542 345555543
No 298
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=24.36 E-value=2.8e+02 Score=22.52 Aligned_cols=51 Identities=18% Similarity=0.165 Sum_probs=35.1
Q ss_pred CCCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChh
Q 017731 83 GAGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMG 137 (367)
Q Consensus 83 ~~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~G 137 (367)
++|++.+.+|.=++=...... .-..++.+.+.++.+..+.+++.++-.|.|
T Consensus 38 ~~Gik~li~DkDNTL~~~~~~----~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYED----EIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hcCceEEEEcCCCCCCCCCcC----cCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 379999999986653332221 124456667777777767678999999986
No 299
>PF14035 YlzJ: YlzJ-like protein
Probab=24.36 E-value=1e+02 Score=20.61 Aligned_cols=40 Identities=20% Similarity=0.400 Sum_probs=28.9
Q ss_pred CCcccccCCccccCCCccccccCCcEEEEEEecCCCCeEE
Q 017731 1 MPYCEVVGGKEQSAAPDAALNDNGIKIFYRTYGRGPTKVI 40 (367)
Q Consensus 1 mp~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~g~~~p~vv 40 (367)
||...+..+.....+....+..+|+.+-++..+.+..-|+
T Consensus 5 mP~e~Vf~~~~~~~~~~~ei~~~Gv~l~Ve~~~~~~~~Iv 44 (66)
T PF14035_consen 5 MPLELVFEGEEDEYPNQEEIEYNGVPLLVEPVEGGQYRIV 44 (66)
T ss_pred CCHHHhccCccccCCceEEEEECCEEEEEEECCCCcEEEE
Confidence 5666677666666666678888999999998877664443
No 300
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=24.19 E-value=78 Score=25.39 Aligned_cols=35 Identities=31% Similarity=0.395 Sum_probs=24.7
Q ss_pred CCeEEEEcCCCCCccc--hHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 36 PTKVILITGLAGTHDA--WGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
+|.+|++.|+.++... -..+...|.+ .|+.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~----------------------~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFA----------------------RGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHH----------------------TTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH----------------------cCCcEEEec
Confidence 3579999999988743 3455566666 699999997
No 301
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.00 E-value=92 Score=28.20 Aligned_cols=22 Identities=41% Similarity=0.487 Sum_probs=18.6
Q ss_pred CCceEEEEEeChhHHHHHHHHH
Q 017731 125 GWKQAHVFGHSMGAMIACKLAA 146 (367)
Q Consensus 125 ~~~~v~lvGhS~Gg~~a~~~a~ 146 (367)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999988887765
No 302
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=23.33 E-value=41 Score=27.79 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=24.1
Q ss_pred eEEEEcC---CCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 38 KVILITG---LAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 38 ~vv~lHG---~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
.||++|. ...+.+....+++.|.+ +||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~----------------------~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKE----------------------KGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHH----------------------CCCEEEEHH
Confidence 5999994 22334566778888887 799998874
No 303
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=22.86 E-value=2.3e+02 Score=23.61 Aligned_cols=66 Identities=14% Similarity=0.133 Sum_probs=43.1
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCC--cceeEEEEec
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVP--ERVLSLALLN 159 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~v~~lvl~~ 159 (367)
+++.++.+|-+|... .-.+..+++.++++......++++--+..+.-.+..+..+- -.+.++|+--
T Consensus 82 ~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlTK 149 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILTK 149 (196)
T ss_dssp TTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEES
T ss_pred cCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEEe
Confidence 489999999987542 23556778888888876667777665555555655444332 2478888743
No 304
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=22.85 E-value=95 Score=27.90 Aligned_cols=37 Identities=27% Similarity=0.258 Sum_probs=25.7
Q ss_pred HHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcce
Q 017731 115 KDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPERV 152 (367)
Q Consensus 115 ~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~v 152 (367)
-.+.++. ..+..+-++.|.|.|+.+|..++....+.+
T Consensus 86 Gvl~aL~-e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 86 GVVKALW-EQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHHHHHH-HcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3333443 345566689999999999999988654444
No 305
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.61 E-value=1.1e+02 Score=25.30 Aligned_cols=32 Identities=22% Similarity=0.098 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCCceEEEEEeChhHHHHHHH
Q 017731 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIACKL 144 (367)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~ 144 (367)
...-+...+..++.+.++++|||-=|++...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 34666677788999999999999988876654
No 306
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=22.44 E-value=1.3e+02 Score=25.85 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCCeEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCCCCCCCCCCCCCCCCCHH
Q 017731 34 RGPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNRGMGRSSVPVKKTEYTTK 111 (367)
Q Consensus 34 ~~~p~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~S~~~~~~~~~~~~ 111 (367)
.+.|+||++.|+-+++. .-..+...|.. +|++|.++.-| +-+
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDP----------------------Rg~~v~~~~~p--------------t~e 71 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNP----------------------RGARVVALPKP--------------SDR 71 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCC----------------------CeeEEEeCCCC--------------CHH
Confidence 35689999999977663 44556666655 79999998765 222
Q ss_pred HHHHH-HHHHHHHhCC-ceEEEEEeChhHH
Q 017731 112 IMAKD-VIALMDHLGW-KQAHVFGHSMGAM 139 (367)
Q Consensus 112 ~~~~d-l~~~l~~~~~-~~v~lvGhS~Gg~ 139 (367)
+...+ +-.+-..+.. ..+.++=-|+=+-
T Consensus 72 E~~~p~lwRfw~~lP~~G~i~IF~rSwY~~ 101 (230)
T TIGR03707 72 ERTQWYFQRYVQHLPAAGEIVLFDRSWYNR 101 (230)
T ss_pred HHcChHHHHHHHhCCCCCeEEEEeCchhhh
Confidence 22222 3344455532 4677777776433
No 307
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=22.29 E-value=1.3e+02 Score=26.05 Aligned_cols=20 Identities=30% Similarity=0.433 Sum_probs=17.8
Q ss_pred EEEEeChhHHHHHHHHHhCC
Q 017731 130 HVFGHSMGAMIACKLAAMVP 149 (367)
Q Consensus 130 ~lvGhS~Gg~~a~~~a~~~p 149 (367)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998653
No 308
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=22.28 E-value=1.9e+02 Score=23.07 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=27.9
Q ss_pred eEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHH
Q 017731 86 IEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAM 139 (367)
Q Consensus 86 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~ 139 (367)
-.|++.|-+|- .++..++++.+..+... +.+-++++|.+.|=.
T Consensus 66 ~~~i~LDe~Gk----------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~ 108 (153)
T TIGR00246 66 AHVVTLDIPGK----------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLS 108 (153)
T ss_pred CeEEEEcCCCC----------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCC
Confidence 35888887763 44567777777776433 324467788888743
No 309
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.82 E-value=4.1e+02 Score=25.40 Aligned_cols=66 Identities=14% Similarity=0.133 Sum_probs=49.7
Q ss_pred CCeEEEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHHHhCCcc--eeEEEEec
Q 017731 84 AGIEVCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLAAMVPER--VLSLALLN 159 (367)
Q Consensus 84 ~g~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a~~~p~~--v~~lvl~~ 159 (367)
.+|.|+.+|-.|.- .--+++.+.+.++-+.+....+.+|--+|=|.-|...|..+.+. +.|+|+--
T Consensus 181 ~~~DvvIvDTAGRl----------~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlTK 248 (451)
T COG0541 181 EGYDVVIVDTAGRL----------HIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILTK 248 (451)
T ss_pred cCCCEEEEeCCCcc----------cccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEEc
Confidence 45677777755421 12356778888888888888999999999999999999987654 77888743
No 310
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.81 E-value=1.3e+02 Score=22.67 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhCCceEEEEEeChhHHHHH
Q 017731 113 MAKDVIALMDHLGWKQAHVFGHSMGAMIAC 142 (367)
Q Consensus 113 ~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~ 142 (367)
....+.-.+..++.+.++++||+--|++..
T Consensus 45 ~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 45 VLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred HHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 456677778889999999999987776654
No 311
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.52 E-value=2.7e+02 Score=22.36 Aligned_cols=48 Identities=8% Similarity=0.024 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHh--CCceEEEEEeChhHHHHHHHHHhCCcceeEEEEecc
Q 017731 113 MAKDVIALMDHL--GWKQAHVFGHSMGAMIACKLAAMVPERVLSLALLNV 160 (367)
Q Consensus 113 ~~~dl~~~l~~~--~~~~v~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~ 160 (367)
..+.+.++++.+ ..++++++|-|..|.+.+.++...++.+..++=.++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 334444555433 336799999999999999988776777777776665
No 312
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=21.51 E-value=3.8e+02 Score=23.92 Aligned_cols=48 Identities=23% Similarity=0.289 Sum_probs=24.3
Q ss_pred CCeE--EEeeCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCceEEEEEeChhHHH
Q 017731 84 AGIE--VCAFDNRGMGRSSVPVKKTEYTTKIMAKDVIALMDHLGWKQAHVFGHSMGAMI 140 (367)
Q Consensus 84 ~g~~--vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~ 140 (367)
.|.. =+.+|. |+|.+.... .++ ++.+.+..+ ..+ ...+++|+|-=.++
T Consensus 175 ~GI~~~~IilDP-GiGF~k~~~----~n~-~ll~~l~~l-~~l--g~Pilvg~SRKsfi 224 (282)
T PRK11613 175 AGIAKEKLLLDP-GFGFGKNLS----HNY-QLLARLAEF-HHF--NLPLLVGMSRKSMI 224 (282)
T ss_pred cCCChhhEEEeC-CCCcCCCHH----HHH-HHHHHHHHH-HhC--CCCEEEEecccHHH
Confidence 5774 677884 777654211 011 122333332 233 34689999954443
No 313
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=21.19 E-value=65 Score=28.47 Aligned_cols=33 Identities=9% Similarity=0.216 Sum_probs=27.2
Q ss_pred eEEEEcCCCCCccchHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeC
Q 017731 38 KVILITGLAGTHDAWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFD 92 (367)
Q Consensus 38 ~vv~lHG~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D 92 (367)
.||++|-...+......+++.|.+ +||+++.++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~----------------------kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKE----------------------KGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHH----------------------CCCEEEeHH
Confidence 589999776666778888899888 799998874
No 314
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=21.11 E-value=4.7e+02 Score=22.58 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=36.9
Q ss_pred ccEEEEeecCCccCcHHHHHHHHHHhcCCcEEEEcCC-CCcccc-----cChHHHHHHHHHHHhhhc
Q 017731 262 FLVSVIHGRHDVIAQICYARRLAEKLYPVARMIDLPG-GHLVSH-----ERTEEVNQALIDLIKASE 322 (367)
Q Consensus 262 ~Pvlii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~g-gH~~~~-----e~p~~~~~~i~~fl~~~~ 322 (367)
.|++++||-.+.. ..-..+.+.+.+..+++.++- ||-..- ...+.+.+.+.++++...
T Consensus 26 ~plvllHG~~~~~---~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~ 89 (276)
T TIGR02240 26 TPLLIFNGIGANL---ELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD 89 (276)
T ss_pred CcEEEEeCCCcch---HHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC
Confidence 5899999954432 233455555655677888775 665431 135677788888887653
No 315
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=21.00 E-value=2.3e+02 Score=22.24 Aligned_cols=35 Identities=26% Similarity=0.251 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhCCceEEEEEeChhHHHHHHHH
Q 017731 111 KIMAKDVIALMDHLGWKQAHVFGHSMGAMIACKLA 145 (367)
Q Consensus 111 ~~~~~dl~~~l~~~~~~~v~lvGhS~Gg~~a~~~a 145 (367)
......+...+..++.+.++++||+-=|++...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 45566777778889999999999999888875544
No 316
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=20.07 E-value=1.3e+02 Score=26.49 Aligned_cols=38 Identities=11% Similarity=0.281 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCCCCcc--chHHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCCC
Q 017731 35 GPTKVILITGLAGTHD--AWGPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDNR 94 (367)
Q Consensus 35 ~~p~vv~lHG~~~~~~--~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~~ 94 (367)
..|+||++.|+-+++. .-..+...|.. +|++|.++.-|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDP----------------------Rg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNP----------------------QGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCC----------------------CeeEEEeCCCC
Confidence 3478999999977663 44556666655 79999999655
No 317
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=20.02 E-value=3e+02 Score=23.43 Aligned_cols=36 Identities=17% Similarity=0.240 Sum_probs=25.0
Q ss_pred CCeEEEEcCCCCCccc--h-HHhHHhhcCCCCCCCCchhhhcccccCCCCCCCeEEEeeCC
Q 017731 36 PTKVILITGLAGTHDA--W-GPQLKGLAGTDKPNDDDETILQDSVESGDGGAGIEVCAFDN 93 (367)
Q Consensus 36 ~p~vv~lHG~~~~~~~--~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~g~~vi~~D~ 93 (367)
.+.|.|++-.+.+.+. | ......|.+ .|..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~----------------------lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAK----------------------LGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHH----------------------cCCeeeeeec
Confidence 4479999988777654 3 445556666 5888887775
Done!