Query 017733
Match_columns 367
No_of_seqs 156 out of 1341
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 04:04:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a3u_A NCR, NADH\:flavin oxido 100.0 1.2E-93 4.1E-98 696.1 32.1 353 10-366 1-358 (358)
2 4ab4_A Xenobiotic reductase B; 100.0 1.3E-90 4.4E-95 672.8 37.6 346 10-366 1-351 (362)
3 3gka_A N-ethylmaleimide reduct 100.0 1.3E-90 4.4E-95 672.5 37.2 348 9-367 8-360 (361)
4 2hsa_B 12-oxophytodienoate red 100.0 1.2E-87 4E-92 661.8 39.4 363 4-366 9-392 (402)
5 4gbu_A NADPH dehydrogenase 1; 100.0 6.1E-89 2.1E-93 672.1 26.0 363 3-366 7-391 (400)
6 3tjl_A NADPH dehydrogenase; OL 100.0 1.7E-88 5.9E-93 663.5 28.7 360 6-366 7-389 (407)
7 1icp_A OPR1, 12-oxophytodienoa 100.0 5.3E-87 1.8E-91 652.7 35.3 366 1-366 1-374 (376)
8 2r14_A Morphinone reductase; H 100.0 2.5E-86 8.5E-91 647.7 37.6 354 10-366 8-371 (377)
9 3aty_A Tcoye, prostaglandin F2 100.0 9.3E-86 3.2E-90 643.7 38.5 351 9-365 3-378 (379)
10 1vyr_A Pentaerythritol tetrani 100.0 1.1E-84 3.8E-89 634.1 38.8 351 10-364 2-364 (364)
11 2gou_A Oxidoreductase, FMN-bin 100.0 1.8E-84 6E-89 632.9 38.5 350 10-364 2-363 (365)
12 3kru_A NADH:flavin oxidoreduct 100.0 1.7E-83 5.8E-88 619.6 34.0 316 10-339 1-323 (343)
13 3gr7_A NADPH dehydrogenase; fl 100.0 2.9E-83 1E-87 618.7 34.7 325 11-349 3-334 (340)
14 3hgj_A Chromate reductase; TIM 100.0 7.8E-83 2.7E-87 618.6 36.3 325 10-342 1-338 (349)
15 3l5l_A Xenobiotic reductase A; 100.0 1E-82 3.5E-87 620.6 32.1 325 10-340 1-343 (363)
16 3l5a_A NADH/flavin oxidoreduct 100.0 1.3E-82 4.3E-87 628.2 24.3 324 9-340 23-364 (419)
17 1z41_A YQJM, probable NADH-dep 100.0 1.5E-77 5.2E-82 579.5 34.8 317 10-340 2-325 (338)
18 3k30_A Histamine dehydrogenase 100.0 8.6E-73 3E-77 594.1 34.3 333 4-347 5-351 (690)
19 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.4E-71 4.8E-76 583.3 33.2 317 10-340 2-328 (671)
20 1o94_A Tmadh, trimethylamine d 100.0 1.1E-71 3.6E-76 588.8 32.0 322 9-340 5-339 (729)
21 1vhn_A Putative flavin oxidore 100.0 1.2E-36 4.2E-41 291.3 7.5 226 22-337 1-228 (318)
22 3b0p_A TRNA-dihydrouridine syn 100.0 3E-35 1E-39 284.9 16.0 232 23-338 1-241 (350)
23 1f76_A Dihydroorotate dehydrog 100.0 2E-29 6.9E-34 243.0 20.7 249 16-338 46-335 (336)
24 2e6f_A Dihydroorotate dehydrog 99.9 2.1E-25 7.2E-30 212.9 18.0 244 16-339 5-291 (314)
25 1jub_A Dihydroorotate dehydrog 99.9 5.4E-25 1.8E-29 209.8 20.2 244 16-339 3-289 (311)
26 1ep3_A Dihydroorotate dehydrog 99.9 1.8E-25 6E-30 212.8 15.0 242 16-339 8-287 (311)
27 1tv5_A Dhodehase, dihydroorota 99.9 8.9E-25 3E-29 216.1 18.2 248 16-339 83-420 (443)
28 3oix_A Putative dihydroorotate 99.8 2E-19 6.9E-24 172.8 21.3 243 16-338 39-321 (345)
29 4ef8_A Dihydroorotate dehydrog 99.8 5.8E-19 2E-23 170.0 22.9 244 16-338 38-323 (354)
30 1gte_A Dihydropyrimidine dehyd 99.8 1.2E-18 4.1E-23 190.0 23.4 248 16-338 534-833 (1025)
31 3zwt_A Dihydroorotate dehydrog 99.8 8.2E-19 2.8E-23 170.1 18.8 246 16-338 51-344 (367)
32 3i65_A Dihydroorotate dehydrog 99.8 3E-18 1E-22 167.3 20.9 156 157-338 197-391 (415)
33 2nli_A Lactate oxidase; flavoe 99.6 3.8E-15 1.3E-19 144.6 17.7 231 10-328 65-319 (368)
34 2gl5_A Putative dehydratase pr 99.6 3E-15 1E-19 147.6 16.5 140 159-321 152-298 (410)
35 2poz_A Putative dehydratase; o 99.6 3E-15 1E-19 146.8 15.0 139 159-321 139-279 (392)
36 1kbi_A Cytochrome B2, L-LCR; f 99.6 1.1E-13 3.6E-18 139.7 21.7 152 161-329 262-439 (511)
37 2o56_A Putative mandelate race 99.5 2.1E-13 7.1E-18 134.3 16.9 136 159-321 154-295 (407)
38 2z6i_A Trans-2-enoyl-ACP reduc 99.5 7.5E-13 2.6E-17 126.9 20.0 132 161-340 77-215 (332)
39 2ox4_A Putative mandelate race 99.5 4.8E-13 1.6E-17 131.5 16.9 138 159-323 148-291 (403)
40 1p0k_A Isopentenyl-diphosphate 99.5 9.9E-12 3.4E-16 119.9 23.4 132 168-329 136-287 (349)
41 2qq6_A Mandelate racemase/muco 99.4 2.3E-12 7.9E-17 127.0 17.6 135 158-321 150-290 (410)
42 3tjx_A Dihydroorotate dehydrog 99.4 6.2E-12 2.1E-16 121.5 19.9 144 170-338 153-323 (354)
43 1rvk_A Isomerase/lactonizing e 99.4 3.1E-12 1.1E-16 124.9 16.9 135 159-328 151-288 (382)
44 1gox_A (S)-2-hydroxy-acid oxid 99.4 1.7E-11 5.9E-16 119.0 19.7 231 10-328 56-315 (370)
45 2nzl_A Hydroxyacid oxidase 1; 99.4 1.9E-11 6.6E-16 119.4 19.2 233 10-329 79-343 (392)
46 2pgw_A Muconate cycloisomerase 99.4 1.4E-11 4.7E-16 120.3 17.0 134 159-335 149-284 (384)
47 2og9_A Mandelate racemase/muco 99.4 1.2E-11 4.3E-16 121.1 16.1 126 158-324 163-290 (393)
48 1mdl_A Mandelate racemase; iso 99.3 2E-11 6.8E-16 118.1 16.1 127 159-326 146-274 (359)
49 3stp_A Galactonate dehydratase 99.3 3.5E-11 1.2E-15 118.4 17.4 133 159-326 181-315 (412)
50 2ovl_A Putative racemase; stru 99.3 2.5E-11 8.5E-16 118.0 16.0 130 159-329 148-279 (371)
51 3p3b_A Mandelate racemase/muco 99.3 1.8E-11 6.1E-16 119.9 15.0 131 156-321 147-284 (392)
52 1ypf_A GMP reductase; GUAC, pu 99.3 1.8E-10 6.2E-15 110.5 21.6 125 163-327 109-244 (336)
53 2nql_A AGR_PAT_674P, isomerase 99.3 2E-11 6.7E-16 119.4 15.0 129 159-330 166-296 (388)
54 2rdx_A Mandelate racemase/muco 99.3 2E-11 6.9E-16 119.0 14.5 126 159-329 147-274 (379)
55 2qgy_A Enolase from the enviro 99.3 4.7E-11 1.6E-15 116.9 16.4 126 159-325 151-278 (391)
56 2pp0_A L-talarate/galactarate 99.3 6.8E-11 2.3E-15 116.0 16.0 123 159-322 177-301 (398)
57 1mzh_A Deoxyribose-phosphate a 99.2 4.5E-11 1.5E-15 108.2 12.2 126 163-325 74-207 (225)
58 2hzg_A Mandelate racemase/muco 99.2 9.5E-11 3.2E-15 115.1 15.4 133 159-329 147-284 (401)
59 1vcf_A Isopentenyl-diphosphate 99.2 8.8E-11 3E-15 112.5 13.7 129 170-329 143-292 (332)
60 3r2g_A Inosine 5'-monophosphat 99.2 5.4E-10 1.8E-14 107.5 19.1 132 160-333 100-239 (361)
61 2gdq_A YITF; mandelate racemas 99.2 1.1E-10 3.8E-15 113.8 14.5 122 159-321 141-265 (382)
62 2qde_A Mandelate racemase/muco 99.2 1.7E-10 5.7E-15 113.1 15.4 122 159-322 147-270 (397)
63 1nu5_A Chloromuconate cycloiso 99.2 2.4E-10 8.4E-15 110.9 15.7 130 159-329 144-276 (370)
64 1p4c_A L(+)-mandelate dehydrog 99.2 7.2E-10 2.5E-14 107.9 18.7 104 209-329 210-314 (380)
65 2p8b_A Mandelate racemase/muco 99.2 1.9E-10 6.4E-15 111.7 14.5 129 159-329 143-274 (369)
66 3bjs_A Mandelate racemase/muco 99.2 1.8E-10 6.2E-15 114.0 14.5 121 159-321 187-310 (428)
67 3bw2_A 2-nitropropane dioxygen 99.2 5.2E-09 1.8E-13 101.5 24.5 126 161-333 111-248 (369)
68 3rcy_A Mandelate racemase/muco 99.2 5.1E-10 1.7E-14 110.9 17.4 138 159-326 148-288 (433)
69 1jcn_A Inosine monophosphate d 99.2 1.5E-10 5E-15 117.3 13.7 131 161-332 256-397 (514)
70 2oz8_A MLL7089 protein; struct 99.2 5E-10 1.7E-14 109.5 15.5 123 159-322 147-273 (389)
71 2qdd_A Mandelate racemase/muco 99.2 4.7E-10 1.6E-14 109.2 15.1 127 159-330 147-275 (378)
72 1tzz_A Hypothetical protein L1 99.1 4.2E-10 1.4E-14 110.1 14.8 123 158-321 166-294 (392)
73 2hxt_A L-fuconate dehydratase; 99.1 7.1E-10 2.4E-14 110.2 15.8 121 159-321 200-323 (441)
74 3sjn_A Mandelate racemase/muco 99.1 3.7E-10 1.3E-14 109.8 13.5 124 159-321 148-274 (374)
75 2ps2_A Putative mandelate race 99.1 3.9E-10 1.3E-14 109.5 13.6 126 159-329 148-276 (371)
76 1tkk_A Similar to chloromucona 99.1 1E-09 3.5E-14 106.3 16.3 130 159-329 142-275 (366)
77 1eep_A Inosine 5'-monophosphat 99.1 2.9E-10 9.9E-15 111.7 11.8 134 161-334 154-297 (404)
78 1vrd_A Inosine-5'-monophosphat 99.1 5.3E-10 1.8E-14 112.6 13.5 137 159-335 236-382 (494)
79 2zad_A Muconate cycloisomerase 99.1 1.7E-09 5.8E-14 104.0 16.5 136 159-337 141-282 (345)
80 3ozy_A Putative mandelate race 99.1 2.1E-09 7.1E-14 105.1 15.9 126 159-326 153-281 (389)
81 3khj_A Inosine-5-monophosphate 99.1 9.8E-09 3.4E-13 99.1 19.5 134 162-336 107-250 (361)
82 3mqt_A Mandelate racemase/muco 99.0 2.6E-09 8.8E-14 104.6 15.4 131 153-322 148-282 (394)
83 4e5t_A Mandelate racemase / mu 99.0 3.5E-09 1.2E-13 104.0 15.4 133 159-322 153-289 (404)
84 1sjd_A N-acylamino acid racema 99.0 1.8E-09 6.2E-14 104.6 13.0 118 159-321 143-262 (368)
85 3mkc_A Racemase; metabolic pro 99.0 6.1E-09 2.1E-13 101.9 16.5 131 153-322 153-287 (394)
86 4e4u_A Mandalate racemase/muco 99.0 5.6E-09 1.9E-13 102.8 16.3 134 159-322 146-282 (412)
87 3v3w_A Starvation sensing prot 99.0 4.5E-09 1.5E-13 103.8 15.6 148 159-323 151-308 (424)
88 3sbf_A Mandelate racemase / mu 99.0 6.2E-09 2.1E-13 102.1 16.2 149 159-325 135-285 (401)
89 3go2_A Putative L-alanine-DL-g 99.0 7.8E-09 2.7E-13 101.7 16.9 134 159-321 145-291 (409)
90 2gjl_A Hypothetical protein PA 99.0 4.2E-08 1.4E-12 93.6 21.4 132 161-340 85-225 (328)
91 3ddm_A Putative mandelate race 99.0 4.3E-09 1.5E-13 102.9 14.6 121 159-321 157-280 (392)
92 3bo9_A Putative nitroalkan dio 99.0 3.9E-08 1.3E-12 93.8 20.6 122 161-330 91-213 (326)
93 3vcn_A Mannonate dehydratase; 99.0 3.7E-09 1.3E-13 104.4 13.8 148 159-323 152-309 (425)
94 3r4e_A Mandelate racemase/muco 99.0 5.3E-09 1.8E-13 103.1 14.5 146 159-322 145-301 (418)
95 3tji_A Mandelate racemase/muco 99.0 7.3E-09 2.5E-13 102.2 15.5 146 159-325 156-306 (422)
96 3jva_A Dipeptide epimerase; en 99.0 1.3E-08 4.6E-13 98.1 15.9 129 159-329 141-271 (354)
97 3rr1_A GALD, putative D-galact 98.9 1.1E-08 3.9E-13 100.3 15.4 130 159-322 127-259 (405)
98 3eez_A Putative mandelate race 98.9 1.1E-08 3.8E-13 99.5 14.9 132 159-335 147-280 (378)
99 4e4f_A Mannonate dehydratase; 98.9 8.2E-09 2.8E-13 102.0 13.5 145 160-321 152-308 (426)
100 4dwd_A Mandelate racemase/muco 98.9 2.2E-08 7.4E-13 98.0 16.2 128 159-322 141-271 (393)
101 3sr7_A Isopentenyl-diphosphate 98.9 1.1E-07 3.9E-12 91.6 20.0 137 163-327 159-312 (365)
102 3q45_A Mandelate racemase/muco 98.9 2.6E-08 8.8E-13 96.6 15.5 122 159-322 142-265 (368)
103 3t6c_A RSPA, putative MAND fam 98.9 4.1E-08 1.4E-12 97.3 17.3 149 159-324 157-323 (440)
104 3i4k_A Muconate lactonizing en 98.9 3.3E-08 1.1E-12 96.3 16.1 124 159-323 150-276 (383)
105 3vkj_A Isopentenyl-diphosphate 98.9 1.6E-08 5.4E-13 97.9 13.5 102 212-327 175-301 (368)
106 3tj4_A Mandelate racemase; eno 98.9 5.1E-08 1.7E-12 94.6 16.5 122 159-321 153-277 (372)
107 3tdn_A FLR symmetric alpha-bet 98.9 1.2E-09 4E-14 100.1 4.2 88 249-338 157-245 (247)
108 3toy_A Mandelate racemase/muco 98.9 5E-08 1.7E-12 95.0 16.0 122 159-321 169-293 (383)
109 1y0e_A Putative N-acetylmannos 98.8 4.9E-08 1.7E-12 87.7 14.7 132 165-336 81-217 (223)
110 3dg3_A Muconate cycloisomerase 98.8 3.7E-08 1.3E-12 95.4 14.8 122 159-321 141-265 (367)
111 1xm3_A Thiazole biosynthesis p 98.8 1.2E-07 4.2E-12 87.6 17.6 102 212-330 112-215 (264)
112 3ugv_A Enolase; enzyme functio 98.8 6.7E-08 2.3E-12 94.4 16.3 125 159-324 173-302 (390)
113 3sgz_A Hydroxyacid oxidase 2; 98.8 9E-08 3.1E-12 91.6 16.4 103 209-328 202-307 (352)
114 4dxk_A Mandelate racemase / mu 98.8 2.7E-08 9.2E-13 97.5 12.9 130 163-321 158-290 (400)
115 3gd6_A Muconate cycloisomerase 98.8 5.5E-08 1.9E-12 95.0 15.0 127 159-329 144-275 (391)
116 3dip_A Enolase; structural gen 98.8 9E-08 3.1E-12 94.0 15.8 131 162-321 161-294 (410)
117 3ro6_B Putative chloromuconate 98.8 3.3E-08 1.1E-12 95.4 12.4 126 159-326 142-270 (356)
118 4hnl_A Mandelate racemase/muco 98.8 8.6E-08 2.9E-12 94.5 15.4 141 159-321 155-301 (421)
119 3tdn_A FLR symmetric alpha-bet 98.8 2.7E-08 9.3E-13 90.9 10.6 88 249-338 36-124 (247)
120 1yxy_A Putative N-acetylmannos 98.8 4.5E-08 1.5E-12 88.7 11.9 129 163-331 92-223 (234)
121 3tcs_A Racemase, putative; PSI 98.8 1.6E-07 5.6E-12 91.5 16.4 126 167-326 157-284 (388)
122 3r0u_A Enzyme of enolase super 98.8 1.8E-07 6.3E-12 90.9 16.7 124 159-324 144-271 (379)
123 4fo4_A Inosine 5'-monophosphat 98.8 3.9E-08 1.3E-12 94.9 11.7 134 161-334 109-252 (366)
124 4avf_A Inosine-5'-monophosphat 98.8 3.4E-08 1.2E-12 99.2 11.7 133 160-332 229-371 (490)
125 4fxs_A Inosine-5'-monophosphat 98.8 2.9E-08 1E-12 99.8 11.1 132 160-331 231-372 (496)
126 2y88_A Phosphoribosyl isomeras 98.7 3.9E-08 1.3E-12 89.5 10.7 86 250-337 151-240 (244)
127 2qr6_A IMP dehydrogenase/GMP r 98.7 1.1E-06 3.9E-11 85.7 21.9 131 164-330 170-314 (393)
128 3my9_A Muconate cycloisomerase 98.7 7.1E-08 2.4E-12 93.8 12.5 124 160-324 149-274 (377)
129 1r0m_A N-acylamino acid racema 98.7 6.5E-08 2.2E-12 93.9 11.6 117 159-321 150-268 (375)
130 3mwc_A Mandelate racemase/muco 98.7 1.8E-07 6.1E-12 91.7 14.7 124 159-327 165-290 (400)
131 1chr_A Chloromuconate cycloiso 98.7 8.6E-08 2.9E-12 92.9 12.4 120 162-322 148-269 (370)
132 2zc8_A N-acylamino acid racema 98.7 9.2E-08 3.1E-12 92.6 11.9 117 159-321 143-261 (369)
133 4a35_A Mitochondrial enolase s 98.7 5.6E-07 1.9E-11 89.1 17.4 121 159-321 203-328 (441)
134 4e8g_A Enolase, mandelate race 98.6 7.5E-07 2.6E-11 86.9 15.7 124 159-326 166-292 (391)
135 4hpn_A Putative uncharacterize 98.6 1E-06 3.4E-11 85.6 16.3 120 160-321 147-268 (378)
136 3i6e_A Muconate cycloisomerase 98.6 5.2E-07 1.8E-11 87.9 14.0 122 160-323 151-274 (385)
137 4h83_A Mandelate racemase/muco 98.6 3.1E-07 1.1E-11 89.6 12.1 122 160-321 167-290 (388)
138 4dye_A Isomerase; enolase fami 98.6 1.1E-06 3.7E-11 86.0 15.8 123 159-326 170-295 (398)
139 1vzw_A Phosphoribosyl isomeras 98.6 6.7E-07 2.3E-11 81.4 13.2 86 250-337 148-237 (244)
140 3dgb_A Muconate cycloisomerase 98.6 7E-07 2.4E-11 86.9 14.1 119 165-324 156-277 (382)
141 3fv9_G Mandelate racemase/muco 98.5 8.4E-07 2.9E-11 86.5 14.2 127 159-325 147-276 (386)
142 4h1z_A Enolase Q92ZS5; dehydra 98.5 1.7E-06 5.7E-11 85.0 16.2 121 159-321 190-312 (412)
143 1jvn_A Glutamine, bifunctional 98.5 3.7E-07 1.3E-11 93.0 11.8 161 162-337 350-541 (555)
144 1wa3_A 2-keto-3-deoxy-6-phosph 98.5 7.3E-07 2.5E-11 78.9 11.9 125 161-331 24-186 (205)
145 3ik4_A Mandelate racemase/muco 98.5 2.2E-06 7.5E-11 82.9 15.6 122 159-321 145-269 (365)
146 3fcp_A L-Ala-D/L-Glu epimerase 98.5 1.4E-06 4.9E-11 84.7 14.3 122 165-327 155-279 (381)
147 3s5s_A Mandelate racemase/muco 98.5 2.3E-06 7.7E-11 83.5 15.6 122 159-321 146-270 (389)
148 2c6q_A GMP reductase 2; TIM ba 98.5 1.4E-06 5E-11 83.6 13.7 125 166-330 124-260 (351)
149 3q58_A N-acetylmannosamine-6-p 98.5 1.7E-06 5.7E-11 78.3 12.6 128 163-334 92-221 (229)
150 1ka9_F Imidazole glycerol phos 98.5 1.9E-06 6.4E-11 78.6 13.1 84 251-336 155-239 (252)
151 3usb_A Inosine-5'-monophosphat 98.4 7.9E-07 2.7E-11 89.7 11.0 130 161-331 257-397 (511)
152 3ffs_A Inosine-5-monophosphate 98.4 1.7E-06 5.7E-11 84.4 12.7 132 162-334 146-287 (400)
153 3u9i_A Mandelate racemase/muco 98.4 3.2E-06 1.1E-10 82.5 14.8 130 159-321 167-299 (393)
154 1thf_D HISF protein; thermophI 98.4 1.6E-06 5.5E-11 79.1 11.9 82 251-334 154-236 (253)
155 3igs_A N-acetylmannosamine-6-p 98.4 2.5E-06 8.6E-11 77.2 13.0 126 163-332 92-219 (232)
156 1ka9_F Imidazole glycerol phos 98.4 6.5E-07 2.2E-11 81.7 9.1 88 249-338 32-120 (252)
157 1thf_D HISF protein; thermophI 98.4 7.5E-07 2.6E-11 81.4 9.5 87 250-338 32-119 (253)
158 3f4w_A Putative hexulose 6 pho 98.4 2.2E-06 7.5E-11 76.1 12.2 129 165-335 70-200 (211)
159 1h5y_A HISF; histidine biosynt 98.4 2.6E-06 9.1E-11 77.1 12.9 84 251-336 157-241 (253)
160 1qo2_A Molecule: N-((5-phospho 98.4 1.8E-06 6.2E-11 78.4 11.6 86 251-337 147-238 (241)
161 2ozt_A TLR1174 protein; struct 98.4 5.2E-06 1.8E-10 79.2 15.3 121 160-321 119-244 (332)
162 2chr_A Chloromuconate cycloiso 98.4 2.7E-06 9.2E-11 82.3 13.0 122 159-321 145-268 (370)
163 1h5y_A HISF; histidine biosynt 98.4 1.4E-06 4.6E-11 79.1 9.7 88 249-338 34-122 (253)
164 1zfj_A Inosine monophosphate d 98.4 3.9E-06 1.3E-10 84.2 13.9 131 161-331 234-374 (491)
165 1yad_A Regulatory protein TENI 98.4 1.2E-05 4E-10 72.0 15.6 79 256-335 125-205 (221)
166 3va8_A Probable dehydratase; e 98.4 2.3E-06 7.8E-11 84.8 11.8 118 159-321 193-313 (445)
167 3v5c_A Mandelate racemase/muco 98.3 2.7E-06 9.3E-11 83.0 11.8 130 158-321 149-284 (392)
168 3vdg_A Probable glucarate dehy 98.3 2.6E-06 8.7E-11 84.5 11.7 118 159-321 195-315 (445)
169 1qo2_A Molecule: N-((5-phospho 98.3 8.6E-07 2.9E-11 80.5 6.6 85 250-338 32-117 (241)
170 3o07_A Pyridoxine biosynthesis 98.3 1.2E-05 4E-10 73.6 13.5 48 282-330 187-237 (291)
171 3vc5_A Mandelate racemase/muco 98.3 4.1E-06 1.4E-10 82.9 11.4 118 159-321 190-310 (441)
172 2qjg_A Putative aldolase MJ040 98.3 4.7E-05 1.6E-09 70.2 17.7 140 162-335 102-250 (273)
173 1wuf_A Hypothetical protein LI 98.3 7.1E-06 2.4E-10 80.0 12.6 117 159-321 163-281 (393)
174 1vzw_A Phosphoribosyl isomeras 98.2 2.1E-06 7.2E-11 78.0 7.9 86 250-338 34-120 (244)
175 2y88_A Phosphoribosyl isomeras 98.2 2.9E-06 1E-10 76.9 8.8 86 250-338 33-119 (244)
176 2ekc_A AQ_1548, tryptophan syn 98.2 3.5E-05 1.2E-09 70.9 16.1 155 159-328 31-240 (262)
177 3ekg_A Mandelate racemase/muco 98.2 2.3E-05 7.9E-10 76.6 15.6 119 168-321 170-292 (404)
178 3cyj_A Mandelate racemase/muco 98.2 2.1E-05 7.3E-10 76.0 15.1 118 160-321 147-269 (372)
179 3ngj_A Deoxyribose-phosphate a 98.2 1.4E-05 4.8E-10 72.1 12.3 131 162-324 98-231 (239)
180 1h1y_A D-ribulose-5-phosphate 98.2 1.8E-05 6.1E-10 71.3 12.8 129 165-334 80-213 (228)
181 3qld_A Mandelate racemase/muco 98.2 2.7E-05 9.2E-10 75.8 14.4 117 159-321 151-269 (388)
182 3o63_A Probable thiamine-phosp 98.1 5E-05 1.7E-09 69.1 15.0 103 217-336 126-233 (243)
183 4h2h_A Mandelate racemase/muco 98.1 3.9E-05 1.3E-09 74.3 15.1 119 159-321 152-273 (376)
184 3oa3_A Aldolase; structural ge 98.1 4.5E-05 1.5E-09 70.6 14.1 134 162-324 129-265 (288)
185 3mzn_A Glucarate dehydratase; 98.1 2.7E-05 9.1E-10 77.3 13.4 125 159-321 184-310 (450)
186 3p0w_A Mandelate racemase/muco 98.1 2.2E-05 7.7E-10 78.2 12.7 123 159-321 202-328 (470)
187 3ajx_A 3-hexulose-6-phosphate 98.1 2.5E-05 8.7E-10 68.9 11.7 126 166-334 71-198 (207)
188 3ovp_A Ribulose-phosphate 3-ep 98.1 9E-05 3.1E-09 66.8 15.2 50 283-333 158-208 (228)
189 3fxg_A Rhamnonate dehydratase; 98.1 3.7E-05 1.3E-09 76.1 13.6 119 168-321 176-297 (455)
190 3nav_A Tryptophan synthase alp 98.1 9.9E-05 3.4E-09 68.1 15.2 155 159-327 34-242 (271)
191 2pge_A MENC; OSBS, NYSGXRC, PS 98.0 1.6E-05 5.4E-10 77.1 10.2 122 159-321 164-290 (377)
192 2tps_A Protein (thiamin phosph 98.0 3.7E-05 1.3E-09 68.7 11.9 75 256-331 131-209 (227)
193 1wue_A Mandelate racemase/muco 98.0 4.1E-05 1.4E-09 74.4 13.1 117 159-321 163-281 (386)
194 3r12_A Deoxyribose-phosphate a 98.0 6.6E-05 2.3E-09 68.5 13.3 134 162-327 114-252 (260)
195 3pfr_A Mandelate racemase/muco 98.0 3.3E-05 1.1E-09 76.7 12.1 123 159-321 187-313 (455)
196 1xi3_A Thiamine phosphate pyro 98.0 6.8E-05 2.3E-09 66.3 12.8 78 257-335 124-203 (215)
197 1w8s_A FBP aldolase, fructose- 98.0 0.00017 5.9E-09 66.3 15.7 139 163-335 96-244 (263)
198 2opj_A O-succinylbenzoate-COA 98.0 3.2E-05 1.1E-09 73.6 10.8 111 170-321 90-202 (327)
199 3vnd_A TSA, tryptophan synthas 98.0 6.7E-05 2.3E-09 69.2 12.6 159 159-327 32-240 (267)
200 4g8t_A Glucarate dehydratase; 98.0 5.6E-05 1.9E-09 75.3 13.0 121 163-321 208-330 (464)
201 2w6r_A Imidazole glycerol phos 98.0 1.2E-05 4.1E-10 73.9 7.4 85 251-337 159-244 (266)
202 1qop_A Tryptophan synthase alp 98.0 3.8E-05 1.3E-09 70.9 10.8 45 282-327 194-239 (268)
203 1viz_A PCRB protein homolog; s 98.0 1.9E-05 6.5E-10 71.6 8.5 54 281-336 169-225 (240)
204 1ub3_A Aldolase protein; schif 97.9 0.00026 8.7E-09 63.4 15.3 135 161-327 73-212 (220)
205 2nv1_A Pyridoxal biosynthesis 97.9 9.2E-05 3.1E-09 69.6 13.0 55 282-337 196-256 (305)
206 1wv2_A Thiazole moeity, thiazo 97.9 0.00019 6.4E-09 65.2 13.8 132 159-330 87-226 (265)
207 3ndo_A Deoxyribose-phosphate a 97.9 8.9E-05 3.1E-09 66.6 11.4 136 162-324 83-221 (231)
208 4af0_A Inosine-5'-monophosphat 97.9 0.00022 7.5E-09 71.1 14.7 129 160-328 281-419 (556)
209 3inp_A D-ribulose-phosphate 3- 97.8 0.00022 7.6E-09 64.8 13.3 140 160-333 41-234 (246)
210 3vk5_A MOEO5; TIM barrel, tran 97.8 5.1E-05 1.7E-09 69.8 8.9 82 251-339 189-275 (286)
211 1me8_A Inosine-5'-monophosphat 97.8 0.00024 8.1E-09 71.5 14.5 127 162-328 244-387 (503)
212 1n7k_A Deoxyribose-phosphate a 97.8 0.00034 1.2E-08 63.0 14.1 134 161-327 90-228 (234)
213 1tqj_A Ribulose-phosphate 3-ep 97.8 0.00012 4.2E-09 66.0 11.2 128 166-334 79-213 (230)
214 2agk_A 1-(5-phosphoribosyl)-5- 97.8 3.4E-05 1.2E-09 71.0 7.3 83 252-337 162-254 (260)
215 3qja_A IGPS, indole-3-glycerol 97.8 0.00062 2.1E-08 62.9 15.8 126 165-336 128-256 (272)
216 2p3z_A L-rhamnonate dehydratas 97.8 0.00054 1.8E-08 67.2 16.2 118 168-321 182-303 (415)
217 1rpx_A Protein (ribulose-phosp 97.8 9E-05 3.1E-09 66.5 9.5 130 164-334 83-219 (230)
218 2fli_A Ribulose-phosphate 3-ep 97.8 0.00022 7.6E-09 63.3 11.9 126 166-334 78-210 (220)
219 2w6r_A Imidazole glycerol phos 97.7 4.1E-05 1.4E-09 70.2 6.9 87 250-338 32-122 (266)
220 1to3_A Putative aldolase YIHT; 97.7 0.00064 2.2E-08 63.8 15.2 143 163-334 112-270 (304)
221 2yzr_A Pyridoxal biosynthesis 97.7 8.9E-05 3E-09 69.6 9.1 47 283-330 230-281 (330)
222 1rd5_A Tryptophan synthase alp 97.7 0.00034 1.2E-08 64.1 12.7 158 159-327 32-235 (262)
223 4adt_A Pyridoxine biosynthetic 97.7 0.00062 2.1E-08 63.6 14.4 47 283-330 197-246 (297)
224 4gj1_A 1-(5-phosphoribosyl)-5- 97.7 5.2E-05 1.8E-09 69.0 6.5 84 252-337 35-119 (243)
225 3vzx_A Heptaprenylglyceryl pho 97.6 0.00025 8.7E-09 63.6 9.9 83 247-337 139-223 (228)
226 1xg4_A Probable methylisocitra 97.6 0.00082 2.8E-08 62.7 13.8 201 51-326 32-239 (295)
227 2f6u_A GGGPS, (S)-3-O-geranylg 97.6 0.00021 7.2E-09 64.4 9.0 49 281-331 177-227 (234)
228 3jr2_A Hexulose-6-phosphate sy 97.6 0.00016 5.5E-09 64.5 8.0 123 166-330 77-202 (218)
229 3ijl_A Muconate cycloisomerase 97.6 0.00025 8.7E-09 67.6 9.7 115 159-321 136-252 (338)
230 2okt_A OSB synthetase, O-succi 97.5 0.00018 6.3E-09 68.6 8.4 107 166-321 135-243 (342)
231 3glc_A Aldolase LSRF; TIM barr 97.5 0.0021 7.2E-08 59.9 15.2 129 164-331 130-266 (295)
232 1vhc_A Putative KHG/KDPG aldol 97.5 0.00025 8.7E-09 63.6 7.9 111 162-328 79-191 (224)
233 1ea0_A Glutamate synthase [NAD 97.5 0.00061 2.1E-08 75.3 12.2 104 211-327 979-1098(1479)
234 1vcv_A Probable deoxyribose-ph 97.5 0.0018 6.2E-08 58.0 13.3 133 162-323 70-221 (226)
235 1kcz_A Beta-methylaspartase; b 97.4 0.00017 5.8E-09 70.7 6.8 136 159-321 182-330 (413)
236 3tsm_A IGPS, indole-3-glycerol 97.4 0.0043 1.5E-07 57.1 15.8 126 165-336 135-263 (272)
237 1x1o_A Nicotinate-nucleotide p 97.4 0.0021 7.3E-08 59.6 13.9 109 194-329 159-275 (286)
238 2czd_A Orotidine 5'-phosphate 97.4 0.0023 8E-08 56.4 13.2 122 164-331 70-194 (208)
239 2yw3_A 4-hydroxy-2-oxoglutarat 97.4 0.0016 5.4E-08 57.6 12.0 111 163-331 74-187 (207)
240 1ofd_A Ferredoxin-dependent gl 97.4 0.00082 2.8E-08 74.4 12.1 104 211-327 1014-1133(1520)
241 1geq_A Tryptophan synthase alp 97.4 0.007 2.4E-07 54.5 16.5 47 281-328 179-226 (248)
242 3exr_A RMPD (hexulose-6-phosph 97.4 0.0012 4.1E-08 59.0 11.1 125 168-331 78-205 (221)
243 2v82_A 2-dehydro-3-deoxy-6-pho 97.4 0.00067 2.3E-08 59.9 9.1 63 258-328 118-182 (212)
244 3cu2_A Ribulose-5-phosphate 3- 97.4 0.00041 1.4E-08 62.7 7.7 123 164-328 84-223 (237)
245 1vc4_A Indole-3-glycerol phosp 97.3 0.0023 7.8E-08 58.4 12.8 125 165-337 121-251 (254)
246 3nl6_A Thiamine biosynthetic b 97.3 0.0078 2.7E-07 60.8 17.7 99 216-331 98-218 (540)
247 3tha_A Tryptophan synthase alp 97.3 0.00056 1.9E-08 62.3 8.0 151 159-327 28-232 (252)
248 2fym_A Enolase; RNA degradosom 97.3 0.00046 1.6E-08 68.0 7.6 102 212-321 218-340 (431)
249 1ujp_A Tryptophan synthase alp 97.3 0.00081 2.8E-08 62.1 8.7 44 282-328 191-235 (271)
250 2htm_A Thiazole biosynthesis p 97.2 0.0031 1.1E-07 57.3 12.1 129 159-327 77-212 (268)
251 3ctl_A D-allulose-6-phosphate 97.2 0.0011 3.9E-08 59.6 9.1 123 166-330 74-204 (231)
252 2a4a_A Deoxyribose-phosphate a 97.2 0.0026 8.9E-08 58.7 11.3 131 162-317 109-249 (281)
253 1wbh_A KHG/KDPG aldolase; lyas 97.2 0.0014 4.6E-08 58.4 9.0 113 162-330 78-192 (214)
254 1qap_A Quinolinic acid phospho 97.2 0.005 1.7E-07 57.4 13.1 109 194-329 172-287 (296)
255 1p1x_A Deoxyribose-phosphate a 97.1 0.0025 8.6E-08 58.2 10.5 135 162-325 88-242 (260)
256 2uva_G Fatty acid synthase bet 97.1 0.0079 2.7E-07 69.4 16.7 91 248-339 703-818 (2060)
257 1q6o_A Humps, 3-keto-L-gulonat 97.1 0.0054 1.8E-07 54.3 12.2 122 167-331 75-200 (216)
258 1jvn_A Glutamine, bifunctional 97.1 0.0012 4.2E-08 67.0 8.8 88 249-337 281-395 (555)
259 1jpd_X L-Ala-D/L-Glu epimerase 97.0 0.0009 3.1E-08 63.3 6.9 114 159-321 134-249 (324)
260 4eiv_A Deoxyribose-phosphate a 96.9 0.044 1.5E-06 50.5 16.8 138 162-325 103-275 (297)
261 1tqx_A D-ribulose-5-phosphate 96.9 0.0093 3.2E-07 53.4 12.1 105 212-332 100-211 (227)
262 1mxs_A KDPG aldolase; 2-keto-3 96.9 0.0013 4.6E-08 58.9 6.4 109 162-327 88-199 (225)
263 2b7n_A Probable nicotinate-nuc 96.9 0.0034 1.1E-07 57.9 9.2 93 213-329 169-264 (273)
264 2h6r_A Triosephosphate isomera 96.9 0.04 1.4E-06 48.9 16.0 131 166-337 76-214 (219)
265 1kko_A 3-methylaspartate ammon 96.9 0.0057 1.9E-07 59.8 11.1 105 210-321 216-330 (413)
266 3cwo_X Beta/alpha-barrel prote 96.8 0.0059 2E-07 53.7 9.9 85 251-337 133-218 (237)
267 3w01_A Heptaprenylglyceryl pho 96.8 0.003 1E-07 56.8 7.6 56 281-338 173-230 (235)
268 1w6t_A Enolase; bacterial infe 96.7 0.0094 3.2E-07 58.8 11.6 102 212-321 225-352 (444)
269 2jbm_A Nicotinate-nucleotide p 96.7 0.0088 3E-07 55.9 10.7 111 195-329 161-279 (299)
270 1r6w_A OSB synthase, O-succiny 96.7 0.002 6.7E-08 60.9 6.1 106 171-321 127-236 (322)
271 2cu0_A Inosine-5'-monophosphat 96.7 0.012 4.3E-07 58.6 12.3 123 163-328 231-363 (486)
272 2agk_A 1-(5-phosphoribosyl)-5- 96.7 0.00093 3.2E-08 61.3 3.7 79 251-338 41-124 (260)
273 3ih1_A Methylisocitrate lyase; 96.7 0.017 6E-07 53.9 12.3 138 159-326 104-247 (305)
274 1vqt_A Orotidine 5'-phosphate 96.7 0.015 5E-07 51.6 11.2 116 164-335 77-205 (213)
275 3caw_A O-succinylbenzoate synt 96.6 0.0032 1.1E-07 59.6 7.1 107 167-321 118-227 (330)
276 3tqp_A Enolase; energy metabol 96.6 0.013 4.4E-07 57.5 11.5 102 212-321 221-336 (428)
277 4gj1_A 1-(5-phosphoribosyl)-5- 96.6 0.047 1.6E-06 49.3 14.4 138 162-329 87-231 (243)
278 3qn3_A Enolase; structural gen 96.6 0.008 2.7E-07 58.7 9.8 102 211-321 219-334 (417)
279 3kts_A Glycerol uptake operon 96.6 0.0046 1.6E-07 53.8 7.1 67 253-329 119-186 (192)
280 2vc6_A MOSA, dihydrodipicolina 96.6 0.061 2.1E-06 49.8 15.2 123 159-312 21-152 (292)
281 3ceu_A Thiamine phosphate pyro 96.5 0.0041 1.4E-07 54.9 6.7 70 260-330 106-180 (210)
282 1i4n_A Indole-3-glycerol phosp 96.5 0.036 1.2E-06 50.3 13.0 125 165-336 116-244 (251)
283 4h3d_A 3-dehydroquinate dehydr 96.5 0.087 3E-06 48.0 15.6 134 160-322 33-176 (258)
284 2zbt_A Pyridoxal biosynthesis 96.5 0.0024 8.2E-08 59.5 5.2 47 282-329 196-245 (297)
285 3l21_A DHDPS, dihydrodipicolin 96.4 0.072 2.5E-06 49.7 14.8 124 160-314 37-169 (304)
286 1o5k_A DHDPS, dihydrodipicolin 96.4 0.11 3.8E-06 48.5 15.8 126 159-314 33-167 (306)
287 3na8_A Putative dihydrodipicol 96.4 0.063 2.1E-06 50.4 14.1 124 160-314 46-179 (315)
288 1xky_A Dihydrodipicolinate syn 96.4 0.1 3.5E-06 48.6 15.5 123 160-313 34-165 (301)
289 2yxg_A DHDPS, dihydrodipicolin 96.3 0.13 4.3E-06 47.6 15.9 130 159-321 21-160 (289)
290 2qr6_A IMP dehydrogenase/GMP r 96.3 0.016 5.5E-07 56.1 10.1 98 210-323 142-240 (393)
291 2rfg_A Dihydrodipicolinate syn 96.3 0.053 1.8E-06 50.4 13.3 146 159-338 21-175 (297)
292 2wkj_A N-acetylneuraminate lya 96.3 0.11 3.6E-06 48.5 15.2 129 160-321 33-171 (303)
293 1o4u_A Type II quinolic acid p 96.3 0.0057 2E-07 56.6 6.3 113 194-329 156-275 (285)
294 3uj2_A Enolase 1; enzyme funct 96.3 0.033 1.1E-06 54.9 12.1 102 212-321 242-362 (449)
295 3lab_A Putative KDPG (2-keto-3 96.3 0.041 1.4E-06 48.7 11.5 49 282-332 147-196 (217)
296 3m47_A Orotidine 5'-phosphate 96.2 0.073 2.5E-06 47.5 13.3 136 154-335 76-215 (228)
297 3c2e_A Nicotinate-nucleotide p 96.2 0.0072 2.5E-07 56.3 6.8 109 194-329 162-284 (294)
298 3si9_A DHDPS, dihydrodipicolin 96.2 0.088 3E-06 49.4 14.4 123 160-312 44-174 (315)
299 1fob_A Beta-1,4-galactanase; B 96.2 0.28 9.6E-06 46.2 18.0 178 87-300 59-246 (334)
300 2ojp_A DHDPS, dihydrodipicolin 96.2 0.12 4E-06 47.9 15.0 144 160-337 23-175 (292)
301 3qze_A DHDPS, dihydrodipicolin 96.2 0.074 2.5E-06 49.9 13.7 130 160-321 45-182 (314)
302 3q94_A Fructose-bisphosphate a 96.2 0.062 2.1E-06 49.6 12.8 136 164-325 95-239 (288)
303 4a29_A Engineered retro-aldol 96.2 0.094 3.2E-06 47.5 13.6 129 166-340 120-251 (258)
304 3flu_A DHDPS, dihydrodipicolin 96.2 0.08 2.7E-06 49.2 13.8 130 160-321 29-166 (297)
305 2v9d_A YAGE; dihydrodipicolini 96.2 0.13 4.5E-06 48.7 15.5 129 160-321 53-191 (343)
306 2r8w_A AGR_C_1641P; APC7498, d 96.2 0.14 4.9E-06 48.3 15.7 129 160-321 56-193 (332)
307 2ehh_A DHDPS, dihydrodipicolin 96.2 0.15 5.2E-06 47.2 15.6 130 159-321 21-160 (294)
308 1gvf_A Tagatose-bisphosphate a 96.2 0.3 1E-05 45.1 17.2 134 163-322 88-232 (286)
309 3ru6_A Orotidine 5'-phosphate 96.2 0.072 2.5E-06 49.6 13.1 71 247-331 157-239 (303)
310 3lab_A Putative KDPG (2-keto-3 96.1 0.015 5E-07 51.6 8.0 80 247-337 24-104 (217)
311 1y0e_A Putative N-acetylmannos 96.1 0.098 3.3E-06 46.0 13.6 122 160-322 24-146 (223)
312 3tak_A DHDPS, dihydrodipicolin 96.1 0.08 2.7E-06 49.0 13.5 123 160-313 23-154 (291)
313 1qpo_A Quinolinate acid phosph 96.1 0.046 1.6E-06 50.5 11.6 113 194-329 158-276 (284)
314 3iv3_A Tagatose 1,6-diphosphat 96.1 0.22 7.6E-06 46.8 16.4 146 164-329 115-287 (332)
315 1f6k_A N-acetylneuraminate lya 96.1 0.15 5.2E-06 47.2 15.1 124 160-314 25-158 (293)
316 3daq_A DHDPS, dihydrodipicolin 96.1 0.081 2.8E-06 49.0 13.2 145 160-337 24-176 (292)
317 1sfl_A 3-dehydroquinate dehydr 96.1 0.099 3.4E-06 47.0 13.3 136 161-324 19-164 (238)
318 3o1n_A 3-dehydroquinate dehydr 96.1 0.18 6E-06 46.4 15.2 140 149-324 46-198 (276)
319 3cpr_A Dihydrodipicolinate syn 96.1 0.13 4.6E-06 47.8 14.6 129 160-321 38-175 (304)
320 2pa6_A Enolase; glycolysis, ly 96.1 0.034 1.2E-06 54.4 11.0 101 213-321 224-338 (427)
321 3m5v_A DHDPS, dihydrodipicolin 96.0 0.12 4.2E-06 48.0 14.2 124 159-313 28-161 (301)
322 2yyu_A Orotidine 5'-phosphate 96.0 0.11 3.8E-06 46.8 13.5 46 285-331 167-224 (246)
323 1pii_A N-(5'phosphoribosyl)ant 96.0 0.079 2.7E-06 52.2 13.3 125 165-336 123-250 (452)
324 1rvg_A Fructose-1,6-bisphospha 96.0 0.67 2.3E-05 43.0 18.8 128 163-315 86-247 (305)
325 3eoo_A Methylisocitrate lyase; 96.0 0.076 2.6E-06 49.4 12.4 139 159-326 98-243 (298)
326 3n9r_A Fructose-bisphosphate a 96.0 0.52 1.8E-05 43.8 18.0 135 163-323 88-256 (307)
327 4aaj_A N-(5'-phosphoribosyl)an 96.0 0.19 6.5E-06 44.8 14.5 120 165-325 85-205 (228)
328 4e38_A Keto-hydroxyglutarate-a 95.9 0.023 7.9E-07 51.0 8.0 80 247-337 45-125 (232)
329 3eb2_A Putative dihydrodipicol 95.8 0.06 2E-06 50.2 11.2 122 160-312 26-156 (300)
330 1ur4_A Galactanase; hydrolase, 95.8 1.3 4.5E-05 42.7 20.8 170 87-300 88-263 (399)
331 3a5f_A Dihydrodipicolinate syn 95.8 0.1 3.4E-06 48.4 12.4 123 160-313 23-154 (291)
332 3tfx_A Orotidine 5'-phosphate 95.8 0.13 4.5E-06 46.8 12.8 130 164-332 75-226 (259)
333 3b4u_A Dihydrodipicolinate syn 95.8 0.2 6.9E-06 46.4 14.4 124 160-314 25-162 (294)
334 2yr1_A 3-dehydroquinate dehydr 95.7 0.43 1.5E-05 43.3 16.1 132 163-324 36-178 (257)
335 3fkr_A L-2-keto-3-deoxyarabona 95.7 0.16 5.4E-06 47.4 13.5 123 160-312 30-162 (309)
336 2fiq_A Putative tagatose 6-pho 95.7 0.26 9.1E-06 47.8 15.3 148 163-325 108-284 (420)
337 3d0c_A Dihydrodipicolinate syn 95.7 0.094 3.2E-06 49.1 11.9 122 160-313 34-160 (314)
338 2isw_A Putative fructose-1,6-b 95.7 0.1 3.5E-06 48.9 12.0 126 165-315 91-249 (323)
339 1yxy_A Putative N-acetylmannos 95.7 0.26 8.9E-06 43.6 14.3 116 162-319 39-157 (234)
340 1dbt_A Orotidine 5'-phosphate 95.6 0.12 4E-06 46.4 11.8 130 165-333 74-225 (239)
341 3e96_A Dihydrodipicolinate syn 95.6 0.13 4.3E-06 48.3 12.3 128 160-321 34-166 (316)
342 2p10_A MLL9387 protein; putati 95.6 0.056 1.9E-06 49.6 9.3 134 166-329 115-266 (286)
343 1eix_A Orotidine 5'-monophosph 95.5 0.12 4.1E-06 46.5 11.6 48 285-333 173-232 (245)
344 3b8i_A PA4872 oxaloacetate dec 95.5 0.23 8E-06 45.8 13.6 137 159-325 97-237 (287)
345 4e38_A Keto-hydroxyglutarate-a 95.5 0.12 4E-06 46.3 11.2 120 160-337 47-170 (232)
346 3qfe_A Putative dihydrodipicol 95.5 0.18 6.2E-06 47.2 13.1 130 160-321 33-174 (318)
347 3dz1_A Dihydrodipicolinate syn 95.4 0.35 1.2E-05 45.2 14.8 121 160-312 30-160 (313)
348 2r91_A 2-keto-3-deoxy-(6-phosp 95.4 0.13 4.3E-06 47.6 11.5 118 159-309 19-145 (286)
349 3s5o_A 4-hydroxy-2-oxoglutarat 95.4 0.1 3.5E-06 48.7 11.0 130 160-321 36-175 (307)
350 3khj_A Inosine-5-monophosphate 95.3 0.15 5.2E-06 48.7 12.1 92 211-322 82-173 (361)
351 1zlp_A PSR132, petal death pro 95.3 0.18 6.3E-06 47.2 12.1 139 159-326 116-261 (318)
352 1m5w_A Pyridoxal phosphate bio 95.2 0.12 4E-06 46.1 10.1 39 291-329 184-222 (243)
353 3paj_A Nicotinate-nucleotide p 95.2 0.19 6.4E-06 47.1 12.0 86 213-325 219-306 (320)
354 3h5d_A DHDPS, dihydrodipicolin 95.2 0.31 1.1E-05 45.5 13.6 143 160-337 29-181 (311)
355 4dbe_A Orotidine 5'-phosphate 95.2 0.038 1.3E-06 49.2 6.9 71 251-332 125-197 (222)
356 3qm3_A Fructose-bisphosphate a 95.2 0.59 2E-05 44.4 15.4 164 95-315 93-281 (357)
357 1w3i_A EDA, 2-keto-3-deoxy glu 95.1 0.13 4.4E-06 47.7 10.7 117 160-309 21-146 (293)
358 2ftp_A Hydroxymethylglutaryl-C 95.1 0.08 2.8E-06 49.3 9.3 141 164-320 88-233 (302)
359 1vhc_A Putative KHG/KDPG aldol 95.1 0.2 7E-06 44.5 11.4 107 160-321 30-136 (224)
360 3tr2_A Orotidine 5'-phosphate 95.0 0.59 2E-05 41.9 14.4 73 247-333 143-227 (239)
361 1hjs_A Beta-1,4-galactanase; 4 95.0 1.5 5.3E-05 41.0 18.0 174 87-300 59-245 (332)
362 2nuw_A 2-keto-3-deoxygluconate 95.0 0.11 3.9E-06 47.9 9.8 118 160-310 21-147 (288)
363 2hjp_A Phosphonopyruvate hydro 94.8 0.51 1.8E-05 43.6 13.6 142 159-326 90-239 (290)
364 3gk0_A PNP synthase, pyridoxin 94.8 0.18 6E-06 45.8 10.0 38 292-329 213-250 (278)
365 3qw3_A Orotidine-5-phosphate d 94.8 0.27 9.1E-06 44.6 11.5 139 153-333 87-239 (255)
366 2al1_A Enolase 1, 2-phospho-D- 94.6 0.21 7.2E-06 48.9 11.1 68 246-321 274-344 (436)
367 3lye_A Oxaloacetate acetyl hyd 94.5 0.21 7.3E-06 46.5 10.4 138 159-325 103-250 (307)
368 1vc4_A Indole-3-glycerol phosp 94.5 0.24 8.2E-06 44.9 10.5 79 250-336 67-147 (254)
369 3r2g_A Inosine 5'-monophosphat 94.5 0.12 4.1E-06 49.4 8.7 69 249-322 100-169 (361)
370 2akz_A Gamma enolase, neural; 94.4 0.29 9.8E-06 48.0 11.6 68 246-321 271-341 (439)
371 3elf_A Fructose-bisphosphate a 94.4 0.73 2.5E-05 43.6 13.9 142 153-316 105-271 (349)
372 3fa4_A 2,3-dimethylmalate lyas 94.4 0.34 1.2E-05 45.0 11.4 138 160-326 96-243 (302)
373 2v82_A 2-dehydro-3-deoxy-6-pho 94.3 0.2 6.8E-06 43.7 9.3 80 246-336 17-98 (212)
374 3ldv_A Orotidine 5'-phosphate 94.3 0.59 2E-05 42.3 12.6 73 248-334 162-246 (255)
375 1ydn_A Hydroxymethylglutaryl-C 94.3 0.31 1E-05 45.0 11.0 142 164-321 84-230 (295)
376 2hmc_A AGR_L_411P, dihydrodipi 94.3 0.51 1.8E-05 44.7 12.6 128 160-321 48-184 (344)
377 1s2w_A Phosphoenolpyruvate pho 94.1 0.91 3.1E-05 42.0 13.7 141 159-326 94-242 (295)
378 1o66_A 3-methyl-2-oxobutanoate 94.1 0.39 1.3E-05 43.9 11.0 103 159-301 95-204 (275)
379 3tqv_A Nicotinate-nucleotide p 94.0 0.33 1.1E-05 44.7 10.3 88 213-327 186-275 (287)
380 4fo4_A Inosine 5'-monophosphat 93.9 0.24 8.3E-06 47.3 9.7 66 252-322 111-177 (366)
381 3gnn_A Nicotinate-nucleotide p 93.9 0.27 9.1E-06 45.6 9.5 86 213-325 197-284 (298)
382 3ih1_A Methylisocitrate lyase; 93.9 1 3.6E-05 41.8 13.7 152 162-339 39-210 (305)
383 2ze3_A DFA0005; organic waste 93.9 1.1 3.9E-05 40.9 13.7 154 162-339 26-203 (275)
384 2ptz_A Enolase; lyase, glycoly 93.9 0.23 8E-06 48.5 9.7 100 212-321 224-345 (432)
385 3pm6_A Putative fructose-bisph 93.8 1.4 4.8E-05 40.9 14.1 127 172-325 113-254 (306)
386 3iwp_A Copper homeostasis prot 93.7 0.58 2E-05 43.0 11.4 128 149-319 105-235 (287)
387 1vkf_A Glycerol uptake operon 93.6 0.13 4.4E-06 44.4 6.4 66 252-330 119-185 (188)
388 3vav_A 3-methyl-2-oxobutanoate 93.6 4.2 0.00014 37.1 17.8 160 147-338 14-206 (275)
389 3l0g_A Nicotinate-nucleotide p 93.5 0.58 2E-05 43.2 10.9 104 194-324 171-281 (300)
390 3jr2_A Hexulose-6-phosphate sy 93.4 1.1 3.7E-05 39.2 12.5 93 210-321 44-138 (218)
391 3igs_A N-acetylmannosamine-6-p 93.4 0.37 1.3E-05 43.0 9.4 107 211-337 6-127 (232)
392 3txv_A Probable tagatose 6-pho 93.4 2.7 9.3E-05 41.0 16.0 154 162-326 114-293 (450)
393 2ztj_A Homocitrate synthase; ( 93.4 2.3 7.9E-05 40.7 15.6 133 166-320 81-219 (382)
394 3q58_A N-acetylmannosamine-6-p 93.3 0.56 1.9E-05 41.7 10.4 109 209-337 4-127 (229)
395 2uv8_G Fatty acid synthase sub 93.3 0.47 1.6E-05 54.8 12.2 92 249-341 711-827 (2051)
396 4gfi_A Mandelate racemase/muco 93.2 0.083 2.8E-06 49.7 5.0 61 169-266 142-203 (329)
397 3ble_A Citramalate synthase fr 93.1 0.88 3E-05 42.9 12.0 138 164-320 101-243 (337)
398 1m3u_A 3-methyl-2-oxobutanoate 93.1 0.39 1.3E-05 43.7 9.0 103 159-301 94-204 (264)
399 1hg3_A Triosephosphate isomera 93.1 4.4 0.00015 35.8 16.8 53 284-337 166-220 (225)
400 1oy0_A Ketopantoate hydroxymet 93.0 0.41 1.4E-05 44.0 9.1 45 247-301 178-222 (281)
401 1dos_A Aldolase class II; lyas 92.9 6.4 0.00022 37.3 18.2 140 152-315 117-282 (358)
402 1wa3_A 2-keto-3-deoxy-6-phosph 92.9 0.29 9.9E-06 42.3 7.7 70 246-324 20-91 (205)
403 1nvm_A HOA, 4-hydroxy-2-oxoval 92.7 1.6 5.6E-05 41.1 13.3 130 165-331 99-239 (345)
404 4dpp_A DHDPS 2, dihydrodipicol 92.7 1 3.6E-05 42.8 11.9 121 160-313 81-210 (360)
405 1ydo_A HMG-COA lyase; TIM-barr 92.7 1.3 4.3E-05 41.2 12.3 139 165-320 87-231 (307)
406 3f4w_A Putative hexulose 6 pho 92.7 2.5 8.6E-05 36.4 13.6 107 211-337 39-155 (211)
407 1qop_A Tryptophan synthase alp 92.6 0.84 2.9E-05 41.5 10.8 75 247-322 30-129 (268)
408 1zco_A 2-dehydro-3-deoxyphosph 92.6 5.8 0.0002 35.8 18.5 89 226-324 131-229 (262)
409 1m3u_A 3-methyl-2-oxobutanoate 92.5 5.9 0.0002 35.8 16.1 145 162-338 27-194 (264)
410 2yw3_A 4-hydroxy-2-oxoglutarat 92.5 1.1 3.8E-05 39.0 11.0 105 160-321 26-130 (207)
411 1w0m_A TIM, triosephosphate is 92.4 5.1 0.00017 35.4 15.3 51 285-336 164-216 (226)
412 3qja_A IGPS, indole-3-glycerol 92.4 0.38 1.3E-05 44.0 8.1 77 250-331 74-151 (272)
413 1aj0_A DHPS, dihydropteroate s 92.3 0.65 2.2E-05 42.7 9.5 107 227-337 17-131 (282)
414 3ve9_A Orotidine-5'-phosphate 92.3 0.29 9.9E-06 43.2 6.9 74 249-333 116-191 (215)
415 4af0_A Inosine-5'-monophosphat 92.2 0.34 1.2E-05 48.4 7.9 69 249-322 281-350 (556)
416 1ypf_A GMP reductase; GUAC, pu 92.1 0.39 1.3E-05 45.2 8.1 66 251-321 108-176 (336)
417 2cw6_A Hydroxymethylglutaryl-C 92.0 1.1 3.9E-05 41.2 11.1 139 165-319 86-229 (298)
418 2ekc_A AQ_1548, tryptophan syn 92.0 1.7 6E-05 39.2 12.1 75 246-321 29-128 (262)
419 2ze3_A DFA0005; organic waste 92.0 4.1 0.00014 37.1 14.5 139 159-326 92-236 (275)
420 4avf_A Inosine-5'-monophosphat 91.9 0.42 1.4E-05 47.6 8.3 68 250-322 230-298 (490)
421 3ajx_A 3-hexulose-6-phosphate 91.8 2.6 8.8E-05 36.1 12.6 90 213-321 41-133 (207)
422 1vcv_A Probable deoxyribose-ph 91.8 2.1 7.2E-05 37.9 12.0 113 84-263 98-211 (226)
423 1jub_A Dihydroorotate dehydrog 91.7 3.1 0.0001 38.3 13.7 85 226-321 94-191 (311)
424 1gox_A (S)-2-hydroxy-acid oxid 91.7 1.5 5.1E-05 41.8 11.8 39 283-322 215-253 (370)
425 3vkj_A Isopentenyl-diphosphate 91.6 0.29 9.9E-06 46.8 6.6 74 246-321 136-217 (368)
426 3qw4_B UMP synthase; N-termina 91.6 0.52 1.8E-05 46.4 8.5 134 153-332 88-239 (453)
427 1geq_A Tryptophan synthase alp 91.5 0.32 1.1E-05 43.4 6.5 75 247-323 18-116 (248)
428 3no5_A Uncharacterized protein 91.5 2 6.9E-05 39.2 11.8 54 159-230 30-83 (275)
429 3eoo_A Methylisocitrate lyase; 91.5 3.3 0.00011 38.3 13.4 154 162-339 32-206 (298)
430 3zen_D Fatty acid synthase; tr 91.4 0.21 7.1E-06 59.9 6.3 53 286-339 599-669 (3089)
431 2wqp_A Polysialic acid capsule 91.4 1.5 5.1E-05 41.5 11.2 134 160-321 36-180 (349)
432 3fok_A Uncharacterized protein 91.3 1.2 4.1E-05 41.2 10.1 73 246-331 198-284 (307)
433 1zlp_A PSR132, petal death pro 91.3 6 0.0002 36.8 15.0 156 162-340 49-225 (318)
434 2nli_A Lactate oxidase; flavoe 91.1 1.8 6E-05 41.3 11.5 39 282-321 218-256 (368)
435 3nvt_A 3-deoxy-D-arabino-heptu 91.1 11 0.00038 36.0 17.9 98 214-323 240-347 (385)
436 1vli_A Spore coat polysacchari 91.0 1.8 6E-05 41.5 11.3 134 162-321 47-191 (385)
437 1wbh_A KHG/KDPG aldolase; lyas 91.0 0.57 2E-05 41.2 7.4 79 248-337 28-107 (214)
438 3tsm_A IGPS, indole-3-glycerol 90.8 0.44 1.5E-05 43.6 6.7 72 251-328 82-155 (272)
439 2hjp_A Phosphonopyruvate hydro 90.7 3.4 0.00012 38.0 12.7 153 162-339 25-202 (290)
440 3ffs_A Inosine-5-monophosphate 90.7 0.51 1.7E-05 45.6 7.3 66 252-322 147-212 (400)
441 1ep3_A Dihydroorotate dehydrog 90.6 2.9 9.9E-05 38.3 12.3 100 211-321 84-195 (311)
442 2nx9_A Oxaloacetate decarboxyl 90.6 5.6 0.00019 39.1 14.9 139 157-333 101-248 (464)
443 3ble_A Citramalate synthase fr 90.6 4.6 0.00016 37.8 13.8 135 82-291 131-268 (337)
444 3vav_A 3-methyl-2-oxobutanoate 90.4 1.8 6.1E-05 39.5 10.3 102 159-300 106-215 (275)
445 1xg4_A Probable methylisocitra 90.4 7.3 0.00025 35.9 14.6 154 162-338 27-201 (295)
446 3nav_A Tryptophan synthase alp 90.4 1.5 5E-05 40.0 9.8 76 246-322 32-132 (271)
447 4fxs_A Inosine-5'-monophosphat 90.3 0.67 2.3E-05 46.1 8.1 67 251-322 233-300 (496)
448 3noy_A 4-hydroxy-3-methylbut-2 90.2 1.7 5.9E-05 41.0 10.2 77 246-330 44-120 (366)
449 3ivs_A Homocitrate synthase, m 90.1 3.7 0.00013 39.9 12.9 133 165-319 116-252 (423)
450 1ydn_A Hydroxymethylglutaryl-C 89.9 7.4 0.00025 35.5 14.4 122 82-272 114-235 (295)
451 1q7z_A 5-methyltetrahydrofolat 89.8 1.1 3.7E-05 45.4 9.2 87 246-336 338-428 (566)
452 2ftp_A Hydroxymethylglutaryl-C 89.8 7 0.00024 35.9 14.2 125 81-274 117-241 (302)
453 2ffc_A Orotidine 5-monophospha 89.8 0.73 2.5E-05 43.7 7.4 50 283-333 278-335 (353)
454 1rd5_A Tryptophan synthase alp 89.7 2.8 9.5E-05 37.6 11.1 75 247-322 31-125 (262)
455 2c6q_A GMP reductase 2; TIM ba 89.6 1.2 4E-05 42.3 8.8 65 253-322 122-189 (351)
456 1tx2_A DHPS, dihydropteroate s 89.5 0.97 3.3E-05 41.9 7.9 91 245-337 60-157 (297)
457 2yzr_A Pyridoxal biosynthesis 89.5 3 0.0001 38.9 11.2 120 162-321 27-147 (330)
458 4hb7_A Dihydropteroate synthas 89.2 1.8 6.1E-05 39.4 9.3 103 231-338 14-124 (270)
459 2wqp_A Polysialic acid capsule 89.2 13 0.00045 35.0 15.6 142 87-320 90-234 (349)
460 1vrd_A Inosine-5'-monophosphat 89.1 0.95 3.2E-05 44.8 8.1 67 250-321 238-305 (494)
461 1rpx_A Protein (ribulose-phosp 89.0 2.2 7.4E-05 37.4 9.7 117 160-319 24-144 (230)
462 1tqj_A Ribulose-phosphate 3-ep 88.8 1.3 4.4E-05 39.2 8.0 123 160-321 18-140 (230)
463 1p0k_A Isopentenyl-diphosphate 88.8 3.3 0.00011 38.9 11.3 68 254-322 133-209 (349)
464 2qiw_A PEP phosphonomutase; st 88.7 6.3 0.00022 35.4 12.6 151 162-339 30-203 (255)
465 2qiw_A PEP phosphonomutase; st 88.7 4.9 0.00017 36.2 11.9 134 162-324 96-238 (255)
466 2vef_A Dihydropteroate synthas 88.7 1.4 4.9E-05 41.0 8.5 102 232-337 18-127 (314)
467 1h1y_A D-ribulose-5-phosphate 88.7 0.98 3.4E-05 39.8 7.1 120 160-321 20-144 (228)
468 1zco_A 2-dehydro-3-deoxyphosph 88.5 9.1 0.00031 34.5 13.6 123 159-324 37-167 (262)
469 4ef8_A Dihydroorotate dehydrog 88.5 5.1 0.00018 37.9 12.4 146 162-321 61-227 (354)
470 1mxs_A KDPG aldolase; 2-keto-3 88.4 1.1 3.7E-05 39.8 7.1 79 248-337 38-117 (225)
471 2nzl_A Hydroxyacid oxidase 1; 88.3 2.8 9.7E-05 40.3 10.6 39 282-321 241-279 (392)
472 3sgz_A Hydroxyacid oxidase 2; 88.3 4.3 0.00015 38.4 11.6 39 282-321 206-244 (352)
473 3ewb_X 2-isopropylmalate synth 88.1 15 0.00052 33.5 15.1 137 80-289 113-250 (293)
474 1s2w_A Phosphoenolpyruvate pho 88.0 6.4 0.00022 36.2 12.4 153 162-338 29-205 (295)
475 2xz9_A Phosphoenolpyruvate-pro 87.9 16 0.00054 34.0 15.2 215 48-322 32-277 (324)
476 1o66_A 3-methyl-2-oxobutanoate 87.8 16 0.00054 33.2 17.1 146 162-338 27-194 (275)
477 2e6f_A Dihydroorotate dehydrog 87.8 3.7 0.00013 37.8 10.8 97 215-321 81-194 (314)
478 3lye_A Oxaloacetate acetyl hyd 87.6 8.8 0.0003 35.5 13.0 155 162-338 35-212 (307)
479 3rmj_A 2-isopropylmalate synth 87.5 4.3 0.00015 38.7 11.2 130 168-319 96-233 (370)
480 1eep_A Inosine 5'-monophosphat 87.4 1.3 4.4E-05 42.7 7.6 65 252-321 156-221 (404)
481 3sr7_A Isopentenyl-diphosphate 87.4 2.1 7.2E-05 40.8 9.0 68 253-321 160-236 (365)
482 1jcn_A Inosine monophosphate d 87.4 1.4 4.8E-05 43.9 8.1 66 251-321 257-323 (514)
483 3b3d_A YTBE protein, putative 87.3 10 0.00035 34.9 13.6 66 252-317 131-196 (314)
484 2y7e_A 3-keto-5-aminohexanoate 87.2 13 0.00046 33.9 13.9 53 159-230 34-87 (282)
485 1nsj_A PRAI, phosphoribosyl an 87.2 4.8 0.00016 35.0 10.5 36 292-327 150-185 (205)
486 1rqb_A Transcarboxylase 5S sub 87.2 12 0.00041 37.4 14.6 140 158-335 119-269 (539)
487 3vnd_A TSA, tryptophan synthas 86.9 4.6 0.00016 36.6 10.6 91 246-337 30-146 (267)
488 3b8i_A PA4872 oxaloacetate dec 86.8 15 0.00051 33.6 14.1 155 162-340 31-204 (287)
489 1eye_A DHPS 1, dihydropteroate 86.7 3.3 0.00011 37.9 9.6 97 238-337 19-122 (280)
490 3bg3_A Pyruvate carboxylase, m 86.6 12 0.00041 38.8 14.7 137 166-333 204-352 (718)
491 3fa4_A 2,3-dimethylmalate lyas 86.2 9.9 0.00034 35.1 12.5 155 162-338 28-204 (302)
492 3ewb_X 2-isopropylmalate synth 86.1 7.2 0.00025 35.8 11.7 130 168-319 89-226 (293)
493 2wkj_A N-acetylneuraminate lya 86.0 11 0.00038 34.6 13.0 123 31-229 17-142 (303)
494 3g8r_A Probable spore coat pol 86.0 8.9 0.0003 36.2 12.3 124 169-320 31-166 (350)
495 3glc_A Aldolase LSRF; TIM barr 85.6 13 0.00045 34.1 13.1 139 84-313 154-292 (295)
496 2bdq_A Copper homeostasis prot 85.4 8.9 0.00031 33.8 11.2 133 149-320 70-205 (224)
497 3chv_A Prokaryotic domain of u 85.3 1.5 5E-05 40.4 6.4 54 159-230 34-87 (284)
498 2vp8_A Dihydropteroate synthas 85.3 1.4 4.6E-05 41.3 6.2 91 244-337 61-158 (318)
499 1lt8_A Betaine-homocysteine me 85.3 8.7 0.0003 37.0 12.2 126 26-234 115-250 (406)
500 1w8s_A FBP aldolase, fructose- 85.2 21 0.00071 32.0 14.1 110 84-267 121-230 (263)
No 1
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=100.00 E-value=1.2e-93 Score=696.09 Aligned_cols=353 Identities=40% Similarity=0.738 Sum_probs=315.5
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQVE 88 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~ 88 (367)
||+||+|++||+++|||||+|+||+++++ .||.||+.+++||++||+ +||||||+++|++.|+.+++++++|+|++++
T Consensus 1 Mp~LF~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~ 79 (358)
T 4a3u_A 1 MPSLFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVE 79 (358)
T ss_dssp -CCTTSCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHH
T ss_pred CCCCCCCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHH
Confidence 68999999999999999999999999988 899999999999999995 7999999999999999999999999999999
Q ss_pred hhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCC---CCC-CCCCCCCCCChHHHHHHHHHHHHH
Q 017733 89 AWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPG---VDG-LDWSPPRPLSIEEIPKIVNDFRLA 164 (367)
Q Consensus 89 ~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~---~~~-~~~~~~~~mt~~eI~~ii~~f~~a 164 (367)
+||+++++||++|+++++||+|+||++.+.. .+..+++||+++.... ..+ .+...|++||.+||+++|++|++|
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~--~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~A 157 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGRMVPSNV--SGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKA 157 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGGGCCHHH--HSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceeeccccccccccccc--cccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987544 4677899998664321 001 124568999999999999999999
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
|++|++|||||||||++|||||+|||||.+|+|||+||||+|||+||++|||++||+++|+++|+||||+.+...+....
T Consensus 158 A~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~ 237 (358)
T 4a3u_A 158 ARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDS 237 (358)
T ss_dssp HHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCS
T ss_pred HHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999988999999998766554445
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHH
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 324 (367)
++.++...+++.+++.|+++++++.+.............+++.+|+.++.||+++|++|++.|+++|++|.+|+|+|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~~g~~~~~~ae~~l~~G~aD~V~~gR~ 317 (358)
T 4a3u_A 238 HPEQVFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVLNQDYTFETAQAALDSGVADAISFGRP 317 (358)
T ss_dssp STHHHHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEEESSCCHHHHHHHHHHTSCSEEEESHH
T ss_pred chHHHHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCceEeHhhHH
Confidence 56777788999999999999999987665444333344567889999988998888789999999999999999999999
Q ss_pred HHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 325 FLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 325 ~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
+++||+||+|+++|.|+|++++++||+ ....||||||++.|
T Consensus 318 ~ladPdlp~k~~~g~pl~~~~~~t~y~-~~~~GY~dyp~~~e 358 (358)
T 4a3u_A 318 FIGNPDLPRRFFEKAPLTKDVIETWYT-QTPKGYTDYPLLGD 358 (358)
T ss_dssp HHHCTTHHHHHHHTCCCCCCCGGGSSC-SSSTTTTCSCCC--
T ss_pred HHhChhHHHHHHhCCCCCCCchhcCCC-CCCCCcCCCCCCCC
Confidence 999999999999999999999999999 56799999999875
No 2
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=1.3e-90 Score=672.78 Aligned_cols=346 Identities=43% Similarity=0.742 Sum_probs=314.4
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQVE 88 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~ 88 (367)
|++||+|++||+++|||||+|+||+++++ .||.||+.+++||++||+ +||||||+++|++.|+.+++++++|+|++++
T Consensus 1 M~~Lf~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~ 79 (362)
T 4ab4_A 1 MTTLFDPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVR 79 (362)
T ss_dssp -CCTTSCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHH
T ss_pred CcccCCCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHH
Confidence 46799999999999999999999999988 799999999999999998 9999999999999999999999999999999
Q ss_pred hhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCC---CC-CCCCCCCCCChHHHHHHHHHHHHH
Q 017733 89 AWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGV---DG-LDWSPPRPLSIEEIPKIVNDFRLA 164 (367)
Q Consensus 89 ~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~---~~-~~~~~~~~mt~~eI~~ii~~f~~a 164 (367)
+||+++++||++|+++++||+|+||++.+... .+.++++||+++..... .+ .....|++||.+||+++|++|++|
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~A 158 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGRISHPSYL-NGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSG 158 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCccccccccc-CCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999876543 56788999998754210 01 124679999999999999999999
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
|++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+.+.+.+..+.
T Consensus 159 A~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~ 238 (362)
T 4ab4_A 159 AENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDA 238 (362)
T ss_dssp HHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCT
T ss_pred HHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999977999999997655544445
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHH
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 324 (367)
++.+++.++++.|+++|+||||++.+... + .+++.||+.+++|||++|++|+++|+++|++|.||+|++||+
T Consensus 239 ~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-----~---~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~iGR~ 310 (362)
T 4ab4_A 239 DRAETFTYVARELGKRGIAFICSREREAD-----D---SIGPLIKEAFGGPYIVNERFDKASANAALASGKADAVAFGVP 310 (362)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCCCT-----T---CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESHH
T ss_pred CcHHHHHHHHHHHHHhCCCEEEECCCCCC-----H---HHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEEECHH
Confidence 56788999999999999999999987511 1 357889999999999999999999999999999999999999
Q ss_pred HHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 325 FLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 325 ~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
+++||+|++|+++|.+++++|+.+||+ ....||+|||++.+
T Consensus 311 ~lanPdl~~k~~~g~~l~~~d~~~~y~-~~~~gy~dyp~~~~ 351 (362)
T 4ab4_A 311 FIANPDLPARLAADAPLNEAHPETFYG-KGPVGYIDYPRLKL 351 (362)
T ss_dssp HHHCTTHHHHHHTTCCCCCCCGGGSSS-SSSTTTTCSCCCC-
T ss_pred hHhCcHHHHHHHcCCCCCCCChhhccC-CCCCCcccccccch
Confidence 999999999999999999999999999 45689999999875
No 3
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=1.3e-90 Score=672.55 Aligned_cols=348 Identities=43% Similarity=0.749 Sum_probs=315.6
Q ss_pred CCccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 9 TNIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 9 ~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
-++.||+|++||+++|||||+|+||+++++ .||.||+.+++||++||+ +||||||+++|++.|+.+++++++|+|+++
T Consensus 8 ~~~~~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i 86 (361)
T 3gka_A 8 HMPSLFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQV 86 (361)
T ss_dssp -CCCTTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHH
T ss_pred cCccccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHH
Confidence 478999999999999999999999999988 799999999999999998 999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCC---CC-CCCCCCCCCChHHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGV---DG-LDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~---~~-~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
++||+++++||++|+++++||+|+||++.+... .+.++++||+++..... .+ .....|++||.+||+++|++|++
T Consensus 87 ~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~-~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~ 165 (361)
T 3gka_A 87 DGWRLVTDAVHAAGGRIFLQLWHVGRVSDPVFL-DGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRR 165 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSCCGGGT-TTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEeeccCCcccccccc-CCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999976543 46788999998754210 01 12457999999999999999999
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
||++|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.+.+..+
T Consensus 166 AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~ 245 (361)
T 3gka_A 166 GAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGD 245 (361)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999997799999999765544444
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccH
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 323 (367)
.++.+++.++++.|+++|+||||++.+... + .+++.||+.+++|||++|++|+++|+++|++|.||+|++||
T Consensus 246 ~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~-----~---~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~iGR 317 (361)
T 3gka_A 246 SDPAATFGHVARELGRRRIAFLFARESFGG-----D---AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAWGK 317 (361)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEECCCST-----T---CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEESH
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCCCC-----H---HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEECH
Confidence 567788999999999999999999987521 1 45788999999999999999999999999999999999999
Q ss_pred HHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcCC
Q 017733 324 LFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKLA 367 (367)
Q Consensus 324 ~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (367)
++++||+|++|+++|.+++++|+++||+ ....||+|||++..|
T Consensus 318 ~~ladPdl~~k~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~~~~ 360 (361)
T 3gka_A 318 LFIANPDLPRRFKLNAPLNEPNAATFYA-QGEVGYTDYPALESA 360 (361)
T ss_dssp HHHHCTTHHHHHHHTCCCCCCCGGGSSC-SSSTTTTCSCCCC--
T ss_pred HhHhCcHHHHHHHhCCCCCCCccccccC-CCCCCcccChhcccc
Confidence 9999999999999999999999999999 457899999998653
No 4
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=1.2e-87 Score=661.82 Aligned_cols=363 Identities=58% Similarity=0.981 Sum_probs=316.0
Q ss_pred CCCCCCCccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCC
Q 017733 4 AATTTTNIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWT 83 (367)
Q Consensus 4 ~~~~~~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~ 83 (367)
++....+++||+|++||+++|||||+|+||+++++.+|.||+.+++||++||+|+||||||+++|++.|+.+++++++|+
T Consensus 9 ~~~~~~~~~Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~ 88 (402)
T 2hsa_B 9 SSAQDGNNPLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFT 88 (402)
T ss_dssp --------CTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSS
T ss_pred hhhhhhhhhcCCCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCC
Confidence 34445588999999999999999999999999988567999999999999998899999999999999999999999999
Q ss_pred HHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCC-----CCC--CCCCCCCCCChHHHHH
Q 017733 84 KEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPG-----VDG--LDWSPPRPLSIEEIPK 156 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~-----~~~--~~~~~~~~mt~~eI~~ 156 (367)
|+++++||+++++||++|+++++||+|+||++.+...+.|.++++||+++.... ..| .....|++||.+||++
T Consensus 89 d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ 168 (402)
T 2hsa_B 89 KEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQ 168 (402)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHH
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHH
Confidence 999999999999999999999999999999997655445778999999875320 000 0135799999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCc
Q 017733 157 IVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYA 236 (367)
Q Consensus 157 ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~ 236 (367)
++++|++||++|++||||+||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+.+
T Consensus 169 ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~ 248 (402)
T 2hsa_B 169 VVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAI 248 (402)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999779999999975
Q ss_pred cccccCCCChHHHHHHHHHHhhhcC------ccEEEEecCCccccC--C-----ch-hhHHHHHHHHHhcCCcEEEeCCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFK------LLYLHVIEPRMIQLT--D-----KS-ETQRSLLSMRRAFEGTFIAAGGY 302 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~G------vd~i~v~~~~~~~~~--~-----~~-~~~~~~~~ir~~~~~pvi~~Ggi 302 (367)
.+.+..++++.+++.++++.|++.| +|||+++.++..... . .. ....+++.||+.+++|||++|++
T Consensus 249 ~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i 328 (402)
T 2hsa_B 249 DHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY 328 (402)
T ss_dssp CSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC
Confidence 4444444567888999999999999 999999987653211 1 01 23567888999999999999999
Q ss_pred CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 303 SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 303 t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
|+++|+++|++|.||+|++||++++||+|++|+++|.+++++++++||+.....||+|||++.+
T Consensus 329 ~~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~g~~l~~~~~~tfy~~~~~~Gy~dyp~~~~ 392 (402)
T 2hsa_B 329 TRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFLQG 392 (402)
T ss_dssp CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCC--
T ss_pred CHHHHHHHHHCCCCceeeecHHHHhCchHHHHHHhCCCCCCCChhhcccCCCCCCcccCccchh
Confidence 9999999999999999999999999999999999999999999999993255689999998753
No 5
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=100.00 E-value=6.1e-89 Score=672.12 Aligned_cols=363 Identities=37% Similarity=0.607 Sum_probs=301.8
Q ss_pred CCCCCCCCccCCCccccCCeeeCCceeeCcCCCCcc-CCC-CCC-HHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCC
Q 017733 3 AAATTTTNIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNH-IPQ-PHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNT 78 (367)
Q Consensus 3 ~~~~~~~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g-~~t-~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~ 78 (367)
++|.+-.-++||+|++||+++|||||||+||+++++ .+| .|+ +.+++||++||+ |+||||||+++|++.|+.++++
T Consensus 7 ~~P~~~~~s~LF~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~ 86 (400)
T 4gbu_A 7 FKPQALGDTNLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNA 86 (400)
T ss_dssp CCCCCCTTSGGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTS
T ss_pred CCCCCCCCCCCCCCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCC
Confidence 445555567899999999999999999999999888 555 454 678999999998 7899999999999999999999
Q ss_pred CcCCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCC-CCCCCCcccCCCCCCCC----CCCCCCCCCCCCChHH
Q 017733 79 PGIWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQ-PNGEAPISSTSKGVTPG----VDGLDWSPPRPLSIEE 153 (367)
Q Consensus 79 ~~~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~-~~~~~~~~ps~~~~~~~----~~~~~~~~~~~mt~~e 153 (367)
+++|+|+++++||+++++||++|+++++||+|+||++.+... .++.++.++|...+... ........|++||.+|
T Consensus 87 ~gi~~d~~i~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~e 166 (400)
T 4gbu_A 87 PGVWSEEQMVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDE 166 (400)
T ss_dssp CBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHH
T ss_pred CccCCHHHHHHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHH
Confidence 999999999999999999999999999999999999864321 13445566655332210 0000245789999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeC
Q 017733 154 IPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLS 233 (367)
Q Consensus 154 I~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls 233 (367)
|++||++|++||+||++|||||||||+||||||+|||||.+|+|||+||||+|||+||++|||++||+++|+++|+||||
T Consensus 167 I~~ii~~F~~AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS 246 (400)
T 4gbu_A 167 IKQYIKEYVQAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLS 246 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred CCccccccC---CCChHHHHHHHHHHhhhcC-----ccEEEEecCCccccCCc----hhhHHHHHHHHHhcCCcEEEeCC
Q 017733 234 PYAECAEAV---DSNPEALGLYMAKALNKFK-----LLYLHVIEPRMIQLTDK----SETQRSLLSMRRAFEGTFIAAGG 301 (367)
Q Consensus 234 ~~~~~~~~~---~~~~~~~~~~l~~~L~~~G-----vd~i~v~~~~~~~~~~~----~~~~~~~~~ir~~~~~pvi~~Gg 301 (367)
+.+.+.+.. .....++..++++.|+..+ ++++|+..+....+... .......+.+|+.+++|||++|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~ 326 (400)
T 4gbu_A 247 PYGVFNSMSGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGN 326 (400)
T ss_dssp TTCCTTTCCGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESS
T ss_pred cccccCCCCccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCC
Confidence 976544321 2335667777888876653 56888877654332211 11123456689999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 302 Y-SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 302 i-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
+ +..++.+.+.+|++|+|+|||++|+|||||+|+++|.|+|++|+++||+ ....||||||++.|
T Consensus 327 ~~~~~~~~~~~~~~~aDlV~~gR~~iadPdl~~k~~~G~pl~~~d~~tfy~-~~~~Gytdyp~~~e 391 (400)
T 4gbu_A 327 FALHPEVVREEVKDKRTLIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQ-MSAHGYIDYPTYEE 391 (400)
T ss_dssp CTTCHHHHHHHTTSTTEEEECCHHHHHCTTHHHHHHHTCCCBCCCGGGSSC-SSSTTTTCCCCHHH
T ss_pred CCChHHHHHHHHcCCCeEhHHHHHHHHCcHHHHHHHcCCCCCCCChhhcCC-CCCCCcCCCcchHH
Confidence 9 5666666666777999999999999999999999999999999999999 56789999999865
No 6
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=100.00 E-value=1.7e-88 Score=663.53 Aligned_cols=360 Identities=33% Similarity=0.583 Sum_probs=312.7
Q ss_pred CCCCCccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCC-CCcCC
Q 017733 6 TTTTNIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPN-TPGIW 82 (367)
Q Consensus 6 ~~~~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~-~~~~~ 82 (367)
++-..++||+|++||+++|||||+|+||+++++ .+|.||+.+++||++||+ |+||||||+++|++.|+.+++ ++++|
T Consensus 7 ~~m~~~~Lf~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~ 86 (407)
T 3tjl_A 7 SPLKDSEAFQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIW 86 (407)
T ss_dssp CCCTTSGGGSCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCS
T ss_pred CCCCcccCCCCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccC
Confidence 344567899999999999999999999999888 789999999999999998 789999999999999999999 99999
Q ss_pred CHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCC-CCCCCcccCCCCCCCCC---CCCCCCCCCCCChHHHHHHH
Q 017733 83 TKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQP-NGEAPISSTSKGVTPGV---DGLDWSPPRPLSIEEIPKIV 158 (367)
Q Consensus 83 ~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~-~~~~~~~ps~~~~~~~~---~~~~~~~~~~mt~~eI~~ii 158 (367)
+|+++++||+++++||++|+++++||+|+||++.+.+.+ .|.++++||+++..... .......|++||.+||+++|
T Consensus 87 ~d~~i~~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii 166 (407)
T 3tjl_A 87 TDKHAKAWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLV 166 (407)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHH
Confidence 999999999999999999999999999999998754321 36788999998752100 00024679999999999999
Q ss_pred HH-HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 ND-FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~-f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
++ |++||++|++|||||||||+||||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+++.
T Consensus 167 ~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~ 246 (407)
T 3tjl_A 167 YEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWAT 246 (407)
T ss_dssp HTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccc
Confidence 99 99999999999999999999999999999999999999999999999999999999999999998899999999766
Q ss_pred ccccCCC-C---hHHHHHHHHHHh---hhcC--ccEEEEecCCccccC-Cch-hhHHHHHHHHHhcCCcEEEeCCCC-HH
Q 017733 238 CAEAVDS-N---PEALGLYMAKAL---NKFK--LLYLHVIEPRMIQLT-DKS-ETQRSLLSMRRAFEGTFIAAGGYS-RD 305 (367)
Q Consensus 238 ~~~~~~~-~---~~~~~~~l~~~L---~~~G--vd~i~v~~~~~~~~~-~~~-~~~~~~~~ir~~~~~pvi~~Ggit-~~ 305 (367)
+.++... + +.+++.+++++| ++.| +||||++.+...... ..+ .....+..+|+.+++|||++|+++ .+
T Consensus 247 ~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~ 326 (407)
T 3tjl_A 247 FQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSYDA 326 (407)
T ss_dssp GGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCGGGGT
T ss_pred cCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCCCCHH
Confidence 6554433 4 578899999999 8889 999999976543211 111 112346779999999999999994 56
Q ss_pred HHHHHHHc---CCCcEEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 306 EGNKAVAA---NYTDLVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 306 ~a~~~L~~---G~~D~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
++++++++ |.+|+|++||++++||||++|+++|.+++++|+++||+. ...||+|||++.+
T Consensus 327 dA~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~~l~~~d~~tfy~~-~~~GY~dyp~~~~ 389 (407)
T 3tjl_A 327 PEFKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDLVPYDRNTFYSD-NNYGYNTFSMDSE 389 (407)
T ss_dssp TTTHHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHTCCBCCCCGGGSSCS-SSTTTGGGGSCGG
T ss_pred HHHHHHHhhccCCCeEEEeChhhhhCchHHHHHHcCCCCCCCccccccCC-CCCCcccCcchhh
Confidence 57777776 889999999999999999999999999999999999993 4569999998854
No 7
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=5.3e-87 Score=652.65 Aligned_cols=366 Identities=68% Similarity=1.165 Sum_probs=315.7
Q ss_pred CCCCCCCCC---CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCC
Q 017733 1 MEAAATTTT---NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPN 77 (367)
Q Consensus 1 ~~~~~~~~~---~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~ 77 (367)
||-+-+..+ +++||+|++||+++|||||+|+||+++++.+|.||+.+++||++||+|+||||||+++|++.|+.+++
T Consensus 1 ~~~~~~~~~~m~~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~ 80 (376)
T 1icp_A 1 MENKVVEEKQVDKIPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKD 80 (376)
T ss_dssp ---------CCCCCGGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTT
T ss_pred CCccccccccCChhhcCCCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcc
Confidence 444444322 57899999999999999999999999988558999999999999998899999999999999999999
Q ss_pred CCcCCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCC--CCC---CCCCCCCCCChH
Q 017733 78 TPGIWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPG--VDG---LDWSPPRPLSIE 152 (367)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~--~~~---~~~~~~~~mt~~ 152 (367)
++++|+|+++++||+++++||++|+++++||+|+||++.+.+.+.+.++++||+++.... ..+ .....|++||.+
T Consensus 81 ~~gi~~d~~i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~ 160 (376)
T 1icp_A 81 VPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTD 160 (376)
T ss_dssp CCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTT
T ss_pred cCccCCHHHHHHHHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHH
Confidence 999999999999999999999999999999999999998765444678899999875310 000 023579999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL 232 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl 232 (367)
||++++++|++||++|++||||+||||++|||||+|||||.+|+|+|+||||++||+||++|||++||+++|+++|+||+
T Consensus 161 eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrl 240 (376)
T 1icp_A 161 EIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRI 240 (376)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976999999
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVA 312 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~ 312 (367)
|+.+.+.+..+.++.+++.++++.|+++|+||||++.+++....+.......++.||+.+++||+++|++++++++++|+
T Consensus 241 s~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~ 320 (376)
T 1icp_A 241 SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALI 320 (376)
T ss_dssp CTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHH
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHH
Confidence 98654433334567888999999999999999999987643211111123457889999999999999999999999999
Q ss_pred cCCCcEEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 313 ANYTDLVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 313 ~G~~D~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
+|.||+|++||++++||+|++|+++|.+++++++++||+.....||+|||++.+
T Consensus 321 ~g~aD~V~~gR~~l~~P~l~~k~~~g~~l~~~~~~~~y~~~~~~gy~dyp~~~~ 374 (376)
T 1icp_A 321 EDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYPFLET 374 (376)
T ss_dssp TTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSCCCSSTTTTCSCCCC-
T ss_pred CCCCcEEeecHHHHhCccHHHHHHcCCCCCCCCHHHcccCCCCCCcccCccccc
Confidence 999999999999999999999999999999999999994356789999999853
No 8
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=2.5e-86 Score=647.74 Aligned_cols=354 Identities=46% Similarity=0.769 Sum_probs=316.3
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhhhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEA 89 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~ 89 (367)
+++||+|++||+++|||||+|+||++.++.+|.||+.+++||++|| ++||||||+++|++.|+.+++++++|+|+++++
T Consensus 8 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA-~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~ 86 (377)
T 2r14_A 8 NPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRA-SAGLIISEATNISPTARGYVYTPGIWTDAQEAG 86 (377)
T ss_dssp CCCTTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTT-TSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHH
T ss_pred hhhcCCCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHh-cCCEEEEcceeeccccccCCCCcccCCHHHHHH
Confidence 6789999999999999999999999988888999999999999999 599999999999999999999999999999999
Q ss_pred hhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCC-C--------CCC-CCCCCCCCCChHHHHHHHH
Q 017733 90 WKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTP-G--------VDG-LDWSPPRPLSIEEIPKIVN 159 (367)
Q Consensus 90 ~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~-~--------~~~-~~~~~~~~mt~~eI~~ii~ 159 (367)
||+++++||++|+++++||+|+||++.+.+.+.+.++++||+++... . ..+ .....|++||.+||+++++
T Consensus 87 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~ 166 (377)
T 2r14_A 87 WKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVE 166 (377)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHH
T ss_pred HHHHHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHH
Confidence 99999999999999999999999999876544567889999987531 0 000 0135799999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
+|++||++|++||||+||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|+++|+||||+.+.+.
T Consensus 167 ~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~ 246 (377)
T 2r14_A 167 DYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELF 246 (377)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999669999999975554
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
++.++++.+++.++++.|++.|+||||++.+.+...... ....+++.||+.+++|||++|++++++|+++|++|.||+|
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAV 325 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEE
Confidence 444456788899999999999999999998764321111 1356788999999999999999999999999999999999
Q ss_pred cccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCcC
Q 017733 320 AFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLKL 366 (367)
Q Consensus 320 ~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (367)
++||++++||+|++|+++|.+++++++++||+ ....||+|||++.+
T Consensus 326 ~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~-~~~~gy~dyp~~~~ 371 (377)
T 2r14_A 326 AFGRPFIANPDLPERFRLGAALNEPDPSTFYG-GAEVGYTDYPFLDN 371 (377)
T ss_dssp EESHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCSCCCCC
T ss_pred eecHHHHhCchHHHHHHcCCCCCCCCHHhcCC-CCCCCcccCccccc
Confidence 99999999999999999999999999999998 44679999999864
No 9
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=100.00 E-value=9.3e-86 Score=643.70 Aligned_cols=351 Identities=38% Similarity=0.697 Sum_probs=314.6
Q ss_pred CCccCCCccccCCeeeCCceeeCcCCCCcc--CCCCCC-HHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHH
Q 017733 9 TNIPLLTAYKMGQFNLSHRMVLAPLTRIRS--YNHIPQ-PHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKE 85 (367)
Q Consensus 9 ~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~--~~g~~t-~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~ 85 (367)
.+++||+|++||+++|||||+|+||+++++ .+|.|| +.+++||++|| |+||||||+++|++.|+.+++++++|+|+
T Consensus 3 ~~~~Lf~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~ 81 (379)
T 3aty_A 3 TFPELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDA 81 (379)
T ss_dssp SSTTTTSCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHH
T ss_pred CchhcCCCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHH
Confidence 478999999999999999999999999988 489999 99999999999 69999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHcCCeeEEccccCCccCCC--CCCC--CCCCC-----cccCCCCCCC---CC----CC--CCCCCCC
Q 017733 86 QVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNY--GLQP--NGEAP-----ISSTSKGVTP---GV----DG--LDWSPPR 147 (367)
Q Consensus 86 ~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~--~~~~--~~~~~-----~~ps~~~~~~---~~----~~--~~~~~~~ 147 (367)
++++||+++++||++|+++++||+|+||++.+ .+.+ .+.++ ++||+++... .. .| .....|+
T Consensus 82 ~i~~~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr 161 (379)
T 3aty_A 82 QIEEWRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPE 161 (379)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCE
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCc
Confidence 99999999999999999999999999999875 3322 35667 9999987542 00 01 1245799
Q ss_pred CCChHHHH-HHHHHHHHHHHHHH-HhCCCEEEEecccchHHHhhcCcccccC-CCCCCC-chhhHhHHHHHHHHHHHHHh
Q 017733 148 PLSIEEIP-KIVNDFRLAARNAI-EAGFDGVEIHGANGYLIDQFMKDQVNDR-TDEYGG-SLENRCRFALEVVEAVVREI 223 (367)
Q Consensus 148 ~mt~~eI~-~ii~~f~~aA~~a~-~aGfdgVei~~~~gyLl~qFlsp~~N~R-~D~yGg-s~enr~r~~~eii~aiR~~v 223 (367)
+||.+||+ +++++|++||++|+ ++|||+||||++|||||+|||||.+|+| +|+||| |++||+||++|||++||+++
T Consensus 162 ~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~av 241 (379)
T 3aty_A 162 ELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAV 241 (379)
T ss_dssp ECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhc
Confidence 99999999 99999999999999 9999999999999999999999999999 999999 99999999999999999999
Q ss_pred CCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCC
Q 017733 224 GAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYS 303 (367)
Q Consensus 224 g~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit 303 (367)
|+++|+||||+++.+.++.++++.+++.++++.|++.|+||||++.+.+..+. . +. . ++.||+.+++|||++|++|
T Consensus 242 g~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~-~-~~-~-~~~ir~~~~iPvi~~G~it 317 (379)
T 3aty_A 242 GSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQ-I-GD-V-VAWVRGSYSGVKISNLRYD 317 (379)
T ss_dssp CGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCC-C-CC-H-HHHHHTTCCSCEEEESSCC
T ss_pred CCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCC-c-cH-H-HHHHHHHCCCcEEEECCCC
Confidence 97799999999754444444567888999999999999999999987543211 1 12 5 8889999999999999999
Q ss_pred HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCCc
Q 017733 304 RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFLK 365 (367)
Q Consensus 304 ~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (367)
+++|+++|++|.||+|++||++++||+|++|+++|.+++++++++||+ ....||+|||++.
T Consensus 318 ~~~a~~~l~~g~aD~V~igR~~l~~P~l~~k~~~g~~l~~~~~~t~y~-~~~~gy~dyp~~~ 378 (379)
T 3aty_A 318 FEEADQQIREGKVDAVAFGAKFIANPDLVERAQQNWPLNEPRPETYYT-RTAVGYNDYPTYN 378 (379)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCCCCCCCGGGTTC-SSSTTTTCCCCTT
T ss_pred HHHHHHHHHcCCCeEEEecHHHHhCcHHHHHHHcCCCCCCCCHhhccC-CCCCCccCCcccC
Confidence 999999999999999999999999999999999999999999999998 4568999999984
No 10
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=1.1e-84 Score=634.10 Aligned_cols=351 Identities=43% Similarity=0.723 Sum_probs=314.6
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc--CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS--YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~--~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
+++||+|++||+++|||||+|+||++.++ .+|.||+.+++||++|| |+||||||+++|++.|+.+++++++|+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (364)
T 1vyr_A 2 AEKLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQI 80 (364)
T ss_dssp CCSTTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCCcccCCHHHH
Confidence 67899999999999999999999999876 68999999999999999 7999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCC-----CCC----CCCCCCCCCChHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPG-----VDG----LDWSPPRPLSIEEIPKIV 158 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~-----~~~----~~~~~~~~mt~~eI~~ii 158 (367)
++||+++++||++|+++++||+|+||++.+.+.+.+.++++||+++.... ..| .....|++||.+||+.++
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i 160 (364)
T 1vyr_A 81 AAWKKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIV 160 (364)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999997655334678899999875310 000 013579999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
++|+++|++|+++||||||||++|||||+|||||.+|+|+|+||||++||+||++|||++||+++|+++|+||||+.+.+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999977999999997544
Q ss_pred ccc-CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 017733 239 AEA-VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTD 317 (367)
Q Consensus 239 ~~~-~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 317 (367)
.+. .+.++.+++.++++.|++.|+|||+++.+.+..... ....+++.||+.+++||+++|++|+++++++|++|.||
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD 318 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP--YSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLID 318 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc--ccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCcc
Confidence 432 134577889999999999999999999865432111 23467889999999999999999999999999999999
Q ss_pred EEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCC
Q 017733 318 LVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFL 364 (367)
Q Consensus 318 ~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (367)
+|++||++++||+|++|+++|.+++++++++||+ ....||+|||++
T Consensus 319 ~V~~gR~~l~~P~~~~~~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~ 364 (364)
T 1vyr_A 319 AVAFGRDYIANPDLVARLQKKAELNPQRPESFYG-GGAEGYTDYPSL 364 (364)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCSCCC
T ss_pred EEEECHHHHhChhHHHHHHcCCCCCCCCHHhccC-CCCCCcCCCCCC
Confidence 9999999999999999999999999999999998 456899999985
No 11
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=1.8e-84 Score=632.86 Aligned_cols=350 Identities=41% Similarity=0.723 Sum_probs=314.4
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc--CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS--YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~--~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
+++||+|++||+++|||||+|+||++.++ .+|.||+.+++||++|| ++||||||+++|++.|+.+++++++|+|+++
T Consensus 2 ~~~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-~~GLiite~~~v~~~g~~~~~~~gi~~d~~i 80 (365)
T 2gou_A 2 TQSLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRA-SAGLIVSEGTQISPTAKGYAWTPGIYTPEQI 80 (365)
T ss_dssp CTGGGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTT-TSSEEEEEEEESSGGGCCSTTCCBSSSHHHH
T ss_pred ccccCCCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEECceeecccccCCCCCCccCCHHHH
Confidence 46899999999999999999999999887 58999999999999999 5999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCC-CCCC-----CC----CCCCCCCCCChHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGV-TPGV-----DG----LDWSPPRPLSIEEIPKI 157 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~-~~~~-----~~----~~~~~~~~mt~~eI~~i 157 (367)
++|++++++||++|+++++||+|+||++.+.+. .|.++++||+++. .+.. .| .....|++||.+||+.+
T Consensus 81 ~~~~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~-~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~ 159 (365)
T 2gou_A 81 AGWRIVTEAVHAKGCAIFAQLWHVGRVTHPDNI-DGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQV 159 (365)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEECCTTSSCGGGT-TTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEeecCCCccccccc-CCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHH
Confidence 999999999999999999999999999976543 4678899999875 2100 00 01367999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+++|+++|++|+++||||||||++||||++|||||.+|+|+|+||||++||+||++|||++||+++|+++|+||||+++.
T Consensus 160 i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~ 239 (365)
T 2gou_A 160 IADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTT 239 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999997799999999654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTD 317 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 317 (367)
+.++.+.++.+++.++++.|++.|+|||+++.+++..... ....+++.+|+.+++|||++|++|+++|+++|++|.||
T Consensus 240 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 240 LNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPD--TPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLAD 317 (365)
T ss_dssp TTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCS
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCC--ccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcc
Confidence 4444445678889999999999999999999875431111 12467889999999999999999999999999999999
Q ss_pred EEcccHHHHhCCchHHHHHhCCCCCCCCCcccccCCCCCCcccCCCC
Q 017733 318 LVAFGRLFLANPDLPKRFELNAPLNKYNRSTFYIPDPVVGYTDYPFL 364 (367)
Q Consensus 318 ~V~~gR~~ladP~l~~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (367)
+|++||++++||+|++|+++|.+++++++++||+ ....||+|||++
T Consensus 318 ~V~igR~~i~~P~l~~~~~~g~~l~~~~~~~~y~-~~~~gy~dyp~~ 363 (365)
T 2gou_A 318 MIGFGRPFIANPDLPERLRHGYPLAEHVPATLFG-GGEKGLTDYPTY 363 (365)
T ss_dssp EEECCHHHHHCTTHHHHHHHTCCCCCCCGGGSSS-SSSTTTTCCCCC
T ss_pred eehhcHHHHhCchHHHHHHcCCCCCCCchhhccC-CCCCCCCCCcCc
Confidence 9999999999999999999999999999999998 446799999998
No 12
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=1.7e-83 Score=619.59 Aligned_cols=316 Identities=28% Similarity=0.406 Sum_probs=286.6
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
|++||+|++||+++|||||+|+||+++++ .||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|+++
T Consensus 1 m~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i 80 (343)
T 3kru_A 1 MSILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQV 80 (343)
T ss_dssp -CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHH
T ss_pred CccccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHH
Confidence 57899999999999999999999999988 599999999999999998 7899999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARN 167 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~ 167 (367)
++||+++++||++|+++++||+|+||++.+ .+..+++||+++... ....|++||.+||+++|++|++||++
T Consensus 81 ~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~----~g~~~~apS~i~~~~-----~~~~p~~mt~~eI~~ii~~f~~AA~~ 151 (343)
T 3kru_A 81 KELKKIVDICKANGAVMGIQLAHAGRKCNI----SYEDVVGPSPIKAGD-----RYKLPRELSVEEIKSIVKAFGEAAKR 151 (343)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCC----TTSCCEESSSCCSST-----TSCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCceEeeehhhccCccCc----chhhccCCCcCCCCc-----cccCchhcCHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999865 456789999988542 24679999999999999999999999
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCCh
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~ 246 (367)
|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+.+ +.+ ++.+
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~-~~~--~g~~ 228 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADD-YME--GGIN 228 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCC-SST--TSCC
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechh-hhc--cCcc
Confidence 99999999999999999999999999999999999999999999999999999999987 8999999954 332 2356
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCcccc---CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEccc
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQL---TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~---~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 322 (367)
.+++.++++.|+++ +|||+++.+..... .....+..+++.||+.+++||+++|++ |+++|+++|++|.||+|++|
T Consensus 229 ~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 229 IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALG 307 (343)
T ss_dssp HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHH
Confidence 78899999999999 99999975543211 112235678899999999999999999 79999999999999999999
Q ss_pred HHHHhCCchHHHHHhCC
Q 017733 323 RLFLANPDLPKRFELNA 339 (367)
Q Consensus 323 R~~ladP~l~~k~~~g~ 339 (367)
|++++||+|++|++ |.
T Consensus 308 R~~lanPdl~~k~~-~~ 323 (343)
T 3kru_A 308 RELLRNPYWVLHTY-TS 323 (343)
T ss_dssp HHHHHCTTHHHHTC-SS
T ss_pred HHHhcCCeEEEEEe-cc
Confidence 99999999999999 53
No 13
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=2.9e-83 Score=618.73 Aligned_cols=325 Identities=27% Similarity=0.359 Sum_probs=291.4
Q ss_pred ccCCCccccCCeeeCCceeeCcCCCCcc-C-CCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 11 IPLLTAYKMGQFNLSHRMVLAPLTRIRS-Y-NHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 11 ~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~-~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
++||+|++||+++|||||+|+||+++++ . ||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|+++
T Consensus 3 ~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i 82 (340)
T 3gr7_A 3 TMLFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHI 82 (340)
T ss_dssp CSTTSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHH
T ss_pred hhcCCCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHH
Confidence 5799999999999999999999999888 3 99999999999999998 7899999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARN 167 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~ 167 (367)
++||+++++||++|+++++||+|+||++.+ +..+++||+++... ....|++||.+||+++|++|++||++
T Consensus 83 ~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~-----~~~~~~pS~~~~~~-----~~~~p~~mt~~eI~~ii~~f~~aA~~ 152 (340)
T 3gr7_A 83 AGLRELVGLVKEHGAAIGIQLAHAGRKSQV-----PGEIIAPSAVPFDD-----SSPTPKEMTKADIEETVQAFQNGARR 152 (340)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCS-----SSCCEESSSCCSST-----TSCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCCCccCC-----CCCccCCCCccccC-----CCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999864 45679999988642 24679999999999999999999999
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChH
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPE 247 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~ 247 (367)
|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++ +.+|+||||+++ +.+ ++.+.
T Consensus 153 a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~-~~~--~g~~~ 228 (340)
T 3gr7_A 153 AKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASD-YHP--DGLTA 228 (340)
T ss_dssp HHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCC-CST--TSCCG
T ss_pred HHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEecccc-ccC--CCCCH
Confidence 99999999999999999999999999999999999999999999999999999999 569999999964 322 23456
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCcccc---CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccH
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQL---TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~---~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR 323 (367)
+++.++++.|++.|+||||++.+..... .....+..+++.||+.+++||+++|++ |+++|+++|++|.||+|++||
T Consensus 229 ~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR 308 (340)
T 3gr7_A 229 KDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGR 308 (340)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecH
Confidence 7789999999999999999997653321 122235678899999999999999999 899999999999999999999
Q ss_pred HHHhCCchHHHHHhCCCCCCCCCccc
Q 017733 324 LFLANPDLPKRFELNAPLNKYNRSTF 349 (367)
Q Consensus 324 ~~ladP~l~~k~~~g~~~~~~~~~~~ 349 (367)
++++||+|++|++++...+...+..|
T Consensus 309 ~~lanPdl~~ki~~~l~~~~~~~~~~ 334 (340)
T 3gr7_A 309 ELLRNPYWPYAAARELGAKISAPVQY 334 (340)
T ss_dssp HHHHCTTHHHHHHHHTTCCCCCCGGG
T ss_pred HHHhCchHHHHHHHHCCCCCCCCchh
Confidence 99999999999999977654434333
No 14
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=7.8e-83 Score=618.62 Aligned_cols=325 Identities=26% Similarity=0.382 Sum_probs=290.8
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
|++||+|++||+++|||||+|+||+++.+ .||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|+++
T Consensus 1 m~~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i 80 (349)
T 3hgj_A 1 MALLFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHL 80 (349)
T ss_dssp -CGGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGH
T ss_pred CCcCCCCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHH
Confidence 57899999999999999999999999888 599999999999999998 7899999999999999999999999999999
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCC--C---CCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGL--Q---PNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFR 162 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~--~---~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 162 (367)
++||+++++||++|+++++||+|+||++.+.. . +.+.++++||+++... ....|++||.+||+++|++|+
T Consensus 81 ~~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~-----~~~~p~~mt~~eI~~ii~~f~ 155 (349)
T 3hgj_A 81 PGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDE-----GYPVPEPLDEAGMERILQAFV 155 (349)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSST-----TCCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccC-----CCCCCccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999987432 1 1156789999988642 145799999999999999999
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcccccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEA 241 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~ 241 (367)
+||++|++|||||||||++||||++|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+++...
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~-- 233 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGE-- 233 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCST--
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccC--
Confidence 9999999999999999999999999999999999999999999999999999999999999987 7999999964332
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCcccc----CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL----TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~----~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
++.+.+++.++++.|++.|+||||++.+..... .....+..+++.+|+.+++||+++|++ |+++|+++|++|.+
T Consensus 234 -~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 234 -GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSA 312 (349)
T ss_dssp -TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSC
T ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCc
Confidence 234578899999999999999999996543211 112235678899999999999999999 89999999999999
Q ss_pred cEEcccHHHHhCCchHHHHHhCCCCC
Q 017733 317 DLVAFGRLFLANPDLPKRFELNAPLN 342 (367)
Q Consensus 317 D~V~~gR~~ladP~l~~k~~~g~~~~ 342 (367)
|+|++||++++||+|++|++++...+
T Consensus 313 D~V~iGR~~lanPdl~~k~~~~l~~~ 338 (349)
T 3hgj_A 313 DLVLLGRVLLRDPYFPLRAAKALGVA 338 (349)
T ss_dssp SEEEESTHHHHCTTHHHHHHHHTTCC
T ss_pred eEEEecHHHHhCchHHHHHHHHCCCC
Confidence 99999999999999999999986644
No 15
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=1e-82 Score=620.64 Aligned_cols=325 Identities=26% Similarity=0.358 Sum_probs=290.0
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQVE 88 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~ 88 (367)
|++||+|++||+++|||||+|+||+++.+.||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|++++
T Consensus 1 m~~Lf~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~ 80 (363)
T 3l5l_A 1 MSALFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQ 80 (363)
T ss_dssp -CGGGSCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHH
T ss_pred CcccCCCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHH
Confidence 46899999999999999999999999877899999999999999998 78999999999999999999999999999999
Q ss_pred hhhHHHHHHHHcCCeeEEccccCCccCCCCC-----------CCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 017733 89 AWKPIVDAVHQKGGIIFCQIWHAGRVSNYGL-----------QPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKI 157 (367)
Q Consensus 89 ~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~-----------~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~i 157 (367)
+||+++++||++|+++++||+|+||++.+.. ...+.++++||+++.... ....|++||.+||+++
T Consensus 81 ~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~----~~~~p~~mt~~eI~~i 156 (363)
T 3l5l_A 81 AFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAH----LPKVPREMTLDDIARV 156 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTT----BCCCCEECCHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCC----CCCCCccCCHHHHHHH
Confidence 9999999999999999999999999986321 124567899999885421 1457999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
|++|++||++|++|||||||||++||||++|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+++
T Consensus 157 i~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~ 236 (363)
T 3l5l_A 157 KQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLE 236 (363)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchh
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 7999999853
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc----CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL----TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~----~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+.+.+ ..+.+++.++++.|++.|+||||++.+..... .....+..+++.||+.+++||+++|++ |+++|+++|
T Consensus 237 -~~~~G-~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l 314 (363)
T 3l5l_A 237 -YDGRD-EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAAL 314 (363)
T ss_dssp -SSSCH-HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHH
T ss_pred -cCCCC-CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH
Confidence 32211 14678899999999999999999997653221 122235678899999999999999999 899999999
Q ss_pred HcCCCcEEcccHHHHhCCchHHHHHhCCC
Q 017733 312 AANYTDLVAFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~k~~~g~~ 340 (367)
++|.+|+|++||++++||+|++|++++..
T Consensus 315 ~~G~aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 315 QANQLDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp HTTSCSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred HCCCccEEEecHHHHhCchHHHHHHHHcC
Confidence 99999999999999999999999998765
No 16
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-82 Score=628.24 Aligned_cols=324 Identities=24% Similarity=0.306 Sum_probs=286.8
Q ss_pred CCccCCCcccc-CCeeeCCceeeCcCCCCcc-CCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHh
Q 017733 9 TNIPLLTAYKM-GQFNLSHRMVLAPLTRIRS-YNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQ 86 (367)
Q Consensus 9 ~~~~Lf~Pl~i-g~~~lkNRiv~apm~~~~~-~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~ 86 (367)
.+++||+|++| |+++|||||+|+||+++++ .||.||+.+++||++||+|+||||||+++|++.|+.+++++++|+|++
T Consensus 23 ~~~~Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~ 102 (419)
T 3l5a_A 23 RYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDAC 102 (419)
T ss_dssp TTGGGGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGG
T ss_pred chhhcCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHH
Confidence 47889999999 9999999999999999988 789999999999999998899999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAAR 166 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~ 166 (367)
+++||+++++||++|+++++||+|+||++.+.+. .+.++++||+++.... ....|++||.+||+++|++|++||+
T Consensus 103 i~~~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~-~~~~~vapS~i~~~~~----~~~~pr~mt~~eI~~ii~~F~~AA~ 177 (419)
T 3l5a_A 103 IPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAIL-NFGKVYGPSPMTLHSP----IEHVVIAMSHEKINSIIQQYRDATL 177 (419)
T ss_dssp HHHHHHHHHHHHTTSCEEEEEEECCGGGCHHHHH-HHSEEEESSCEEECSS----SSEEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEeccCCCccccccc-CCCceeCCCCCccccC----CCCCCccCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875432 2456899999875421 1346899999999999999999999
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCch-hhHhHHHHHHHHHHHHHh----CCc-ceEEEeCCCccccc
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSL-ENRCRFALEVVEAVVREI----GAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~-enr~r~~~eii~aiR~~v----g~~-~i~vrls~~~~~~~ 240 (367)
+|++|||||||||+||||||+|||||.+|+|+|+||||+ |||+||++|||++||+++ |++ +|+||||+++...+
T Consensus 178 rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~ 257 (419)
T 3l5a_A 178 RAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGS 257 (419)
T ss_dssp HHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETT
T ss_pred HHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCC
Confidence 999999999999999999999999999999999999999 999999999999999999 555 89999999754432
Q ss_pred cCCCChHHHHHHHHHHhhh-cCccEEEEecCCcc-----cc-CCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNK-FKLLYLHVIEPRMI-----QL-TDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKA 310 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~-~Gvd~i~v~~~~~~-----~~-~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~ 310 (367)
.. +.+.+++.++++.|++ .|+||||++.++.. .. .........++.||+.+ ++|||++|+| |+++|+++
T Consensus 258 ~~-G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~ 336 (419)
T 3l5a_A 258 DL-GYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDA 336 (419)
T ss_dssp EE-EECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHH
T ss_pred CC-CCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHH
Confidence 00 2357889999999999 99999999987641 11 11112345788899998 5899999999 89999999
Q ss_pred HHcCCCcEEcccHHHHhCCchHHHHHhCCC
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k~~~g~~ 340 (367)
|++ +|+|++||++++||+|++|+++|.+
T Consensus 337 L~~--aDlVaiGR~~IanPdlv~ki~~G~~ 364 (419)
T 3l5a_A 337 LQH--ADMVGMSSPFVTEPDFVHKLAEQRP 364 (419)
T ss_dssp GGG--CSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred HHh--CCcHHHHHHHHHCcHHHHHHHcCCc
Confidence 998 9999999999999999999999964
No 17
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=1.5e-77 Score=579.52 Aligned_cols=317 Identities=25% Similarity=0.356 Sum_probs=287.9
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCcc--CCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRS--YNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQ 86 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~--~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~ 86 (367)
+++||+|++||+++|||||+|+||+++.+ .||.||+.+++||++||+ |+||||||+++|++.|+.+++++++|+|++
T Consensus 2 ~~~Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~ 81 (338)
T 1z41_A 2 ARKLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEH 81 (338)
T ss_dssp CCGGGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHH
T ss_pred ccccCCCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHH
Confidence 46899999999999999999999999887 589999999999999998 899999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAAR 166 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~ 166 (367)
+++|++++++||++|+++++||+|+||++.+. ..+++||+++... ....|++||.+||++++++|+++|+
T Consensus 82 ~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~-----~~~~~pS~~~~~~-----~~~~p~~mt~~eI~~~i~~~~~aA~ 151 (338)
T 1z41_A 82 IEGFAKLTEQVKEQGSKIGIQLAHAGRKAELE-----GDIFAPSAIAFDE-----QSATPVEMSAEKVKETVQEFKQAAA 151 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECCGGGCCCS-----SCCEESSSCCSST-----TSCCCEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEEecCCCcccCCC-----CCCcCCCCCCCCC-----CCCCCccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998753 3579999988642 2467999999999999999999999
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCCh
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~ 246 (367)
+|++||||+||||++||||++|||||.+|+|+|+||||++||+||++|||++||+++ +.+|+||||+.+... ++.+
T Consensus 152 ~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~---~g~~ 227 (338)
T 1z41_A 152 RAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTD---KGLD 227 (338)
T ss_dssp HHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCST---TSCC
T ss_pred HHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCC---CCCC
Confidence 999999999999999999999999999999999999999999999999999999999 569999999964332 2345
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccc---cCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEccc
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQ---LTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~---~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 322 (367)
.+++.++++.|++.|+||||++.++... +.....+..+++.||+.+++||+++|++ |+++++++|++|.+|+|++|
T Consensus 228 ~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 228 IADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIG 307 (338)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeec
Confidence 7789999999999999999999876431 1112235677899999999999999999 89999999999999999999
Q ss_pred HHHHhCCchHHHHHhCCC
Q 017733 323 RLFLANPDLPKRFELNAP 340 (367)
Q Consensus 323 R~~ladP~l~~k~~~g~~ 340 (367)
|++++||+|++|+++|.+
T Consensus 308 R~~i~nPdl~~ki~~~~~ 325 (338)
T 1z41_A 308 RELLRDPFFARTAAKQLN 325 (338)
T ss_dssp HHHHHCTTHHHHHHHHTT
T ss_pred HHHHhCchHHHHHHcCCC
Confidence 999999999999999865
No 18
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=8.6e-73 Score=594.12 Aligned_cols=333 Identities=23% Similarity=0.307 Sum_probs=285.7
Q ss_pred CCCCCCCccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHH-HHHHhhcC-CCeeEEEccceeCCCCCCCCCC-Cc
Q 017733 4 AATTTTNIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAI-LYYSQRTT-NGGFLIAEATGVSNTAQGYPNT-PG 80 (367)
Q Consensus 4 ~~~~~~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~-~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~-~~ 80 (367)
...++.+++||+|++||+++|||||+|+||++.+ |.+++... .||++||+ |+||||||+++|++.|+.++.. ++
T Consensus 5 ~~~~~~~~~lf~p~~ig~~~l~NRiv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~ 81 (690)
T 3k30_A 5 PAVAAPYDVLFEPVQIGPFTTKNRFYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELR 81 (690)
T ss_dssp --CCTTGGGGGCCCEETTEECSSSEEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEE
T ss_pred ccccccchhcCCCeeECCEEECCCeEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCc
Confidence 3455679999999999999999999999998763 45565544 56677887 7899999999999999988875 69
Q ss_pred CCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 017733 81 IWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVND 160 (367)
Q Consensus 81 ~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 160 (367)
+|+|+++++|++++++||++|+++++||+|+||++.... .+..+++||+++..... .....|++||.+||+++|++
T Consensus 82 ~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~~~--~~~~~p~~~t~~ei~~~i~~ 157 (690)
T 3k30_A 82 IWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQL--SRETPLGPGHLPVAPDT--IAPIQARAMTKQDIDDLRRW 157 (690)
T ss_dssp CSSGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTT--TCCCCEESSSCBSCSSC--CCSCBCEECCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEccCCcccccccc--cCCCccCCCCCcccccc--cCCCCCCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999886543 46788999998864211 12457999999999999999
Q ss_pred HHHHHHHHHHhCCCEEEEecccch-HHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGY-LIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gy-Ll~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
|++||++|++|||||||||++||| ||+|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+++.+
T Consensus 158 f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~ 237 (690)
T 3k30_A 158 HRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEI 237 (690)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCS
T ss_pred HHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccC
Confidence 999999999999999999999999 999999999999999999999999999999999999999987 899999997544
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc------CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL------TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~------~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
. ++.+.+++.++++.|++ ++|+++++.+.+... .....+..+++.+|+.+++|||++|++ ++++|+++|
T Consensus 238 ~---~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l 313 (690)
T 3k30_A 238 D---GGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQI 313 (690)
T ss_dssp T---TSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHH
Confidence 2 23456889999999998 799999997653211 122234567888999999999999999 799999999
Q ss_pred HcCCCcEEcccHHHHhCCchHHHHHhCCC--CCCCCCc
Q 017733 312 AANYTDLVAFGRLFLANPDLPKRFELNAP--LNKYNRS 347 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~k~~~g~~--~~~~~~~ 347 (367)
++|.||+|++||++++||||++|+++|++ +.+|-.+
T Consensus 314 ~~g~~d~v~~gR~~~~~P~~~~~~~~g~~~~i~~c~~c 351 (690)
T 3k30_A 314 KAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGC 351 (690)
T ss_dssp HTTSCSEEEESHHHHHCTTHHHHHHTTCGGGCCCCCCC
T ss_pred HCCCcceEEEcHHhHhCccHHHHHHcCCccccccccch
Confidence 99999999999999999999999999964 3444333
No 19
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=1.4e-71 Score=583.26 Aligned_cols=317 Identities=24% Similarity=0.343 Sum_probs=284.0
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQVE 88 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~ 88 (367)
+++||+|++||+++|||||+|+||+++++..+.+++.+++||++||+ |+||||||+++|++.|+.+++++++|+|++++
T Consensus 2 ~~~lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~ 81 (671)
T 1ps9_A 2 YPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIP 81 (671)
T ss_dssp CTTTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHH
T ss_pred ccccCCCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHH
Confidence 68899999999999999999999998766445668999999999998 89999999999999999999999999999999
Q ss_pred hhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Q 017733 89 AWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNA 168 (367)
Q Consensus 89 ~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a 168 (367)
+|+++++++|++|+++++||+|+||++.+ ..+++||+++... ....|++||.+||+++|++|+++|++|
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~------~~~~~ps~~~~~~-----~~~~p~~~t~~ei~~~i~~~~~aA~~a 150 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGRYSYQ------PHLVAPSALQAPI-----NRFVPHELSHEEILQLIDNFARCAQLA 150 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGGGSBS------TTCEESSSCCCTT-----CSSCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCcccCC------CCCcCCCCccccc-----CCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999853 2579999987542 134799999999999999999999999
Q ss_pred HHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChH
Q 017733 169 IEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPE 247 (367)
Q Consensus 169 ~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~ 247 (367)
++||||+||||++|||||+|||||.+|+|+|+||||++||+||++||+++||+++|++ +|+||||+++... ++.+.
T Consensus 151 ~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~---~g~~~ 227 (671)
T 1ps9_A 151 REAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVE---DGGTF 227 (671)
T ss_dssp HHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCST---TCCCH
T ss_pred HHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCC---CCCCH
Confidence 9999999999999999999999999999999999999999999999999999999987 7999999864221 23467
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccC-------CchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLT-------DKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~-------~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
+++.++++.|+++|+|||+++.+...... ....+.++++.+|+.+++||+++|++ |+++++++|++|.+|+|
T Consensus 228 ~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V 307 (671)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMV 307 (671)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEE
T ss_pred HHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEE
Confidence 78999999999999999999865432111 11234577889999999999999999 89999999999999999
Q ss_pred cccHHHHhCCchHHHHHhCCC
Q 017733 320 AFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 320 ~~gR~~ladP~l~~k~~~g~~ 340 (367)
++||++++||+|++|+++|.+
T Consensus 308 ~~gR~~l~~P~l~~k~~~g~~ 328 (671)
T 1ps9_A 308 SMARPFLADAELLSKAQSGRA 328 (671)
T ss_dssp EESTHHHHCTTHHHHHHTTCG
T ss_pred EeCHHHHhCcHHHHHHHcCCC
Confidence 999999999999999999964
No 20
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=1.1e-71 Score=588.83 Aligned_cols=322 Identities=21% Similarity=0.300 Sum_probs=281.0
Q ss_pred CCccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCC-CCcCCCHHh
Q 017733 9 TNIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPN-TPGIWTKEQ 86 (367)
Q Consensus 9 ~~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~-~~~~~~~~~ 86 (367)
.+++||+|++||+++|||||+|+||++.++ ++.|+ .+++||++||+ |+||||||+++|++.+..++. ++++|+|++
T Consensus 5 ~~~~Lf~p~~ig~~~l~NRiv~apm~~~~~-~~~~~-~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~ 82 (729)
T 1o94_A 5 KHDILFEPIQIGPKTLRNRFYQVPHCIGAG-SDKPG-FQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGD 82 (729)
T ss_dssp GGGGGGSCEEETTEEESSSEEECCCCCSCT-TTCHH-HHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHH
T ss_pred chhhcCCCeeECCEEECCccEECCCcCCcC-CCCcH-HHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHH
Confidence 488999999999999999999999988765 34554 88999999998 799999999999999988775 589999999
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAAR 166 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~ 166 (367)
+++|++++++||++|+++++||+|+||++.+.. .+.++++||+++.... ....|++||.+||++++++|++||+
T Consensus 83 ~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~--~~~~~~~ps~~~~~~~----~~~~p~~~t~~eI~~~i~~f~~aA~ 156 (729)
T 1o94_A 83 VRNLKAMTDEVHKYGALAGVELWYGGAHAPNME--SRATPRGPSQYASEFE----TLSYCKEMDLSDIAQVQQFYVDAAK 156 (729)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCGGGSCCTT--TCCCCEESSCCBCSSS----TTCBCEECCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCeEEEEecCCCccccccc--cCCCCcCCCccccccc----CCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997654 4678899999885421 2357999999999999999999999
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCC
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~ 245 (367)
+|++|||||||||++|||||+|||||.+|+|+|+||||+|||+||++|||++||+++|++ +|+||||+++.+.+.+..
T Consensus 157 ~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~- 235 (729)
T 1o94_A 157 RSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIE- 235 (729)
T ss_dssp HHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCC-
T ss_pred HHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999987 799999996543221211
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCc---ccc-----C-CchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRM---IQL-----T-DKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~---~~~-----~-~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+++.++++.|++ ++|+++++.+.. ... . ....+..+++.+|+.+++|||++|++ |+++|+++|++|.
T Consensus 236 ~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~ 314 (729)
T 1o94_A 236 AEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGY 314 (729)
T ss_dssp TTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTS
T ss_pred chHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCC
Confidence 13567889999987 799999987641 110 1 11224677889999999999999999 8999999999999
Q ss_pred CcEEcccHHHHhCCchHHHHHhCCC
Q 017733 316 TDLVAFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 316 ~D~V~~gR~~ladP~l~~k~~~g~~ 340 (367)
+|+|++||++++||+|++|+++|++
T Consensus 315 aD~V~~gR~~l~~P~~~~~~~~g~~ 339 (729)
T 1o94_A 315 ADIIGCARPSIADPFLPQKVEQGRY 339 (729)
T ss_dssp CSBEEESHHHHHCTTHHHHHHTTCG
T ss_pred CCEEEeCchhhcCchHHHHHHcCCc
Confidence 9999999999999999999999963
No 21
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=1.2e-36 Score=291.29 Aligned_cols=226 Identities=13% Similarity=0.144 Sum_probs=179.9
Q ss_pred eeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHHc
Q 017733 22 FNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQK 100 (367)
Q Consensus 22 ~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~~ 100 (367)
++|+|||+++||+.. |+ ..||..+++ |+|+++||.+.+++.+... ...|+++ +|..
T Consensus 1 ~~l~nri~~APM~~~-------t~--~~~r~~~~~~G~gli~te~~~~~~~~~~~-----------~~~~~~l---~~~~ 57 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGY-------TD--SAFRTLAFEWGADFAFSEMVSAKGFLMNS-----------QKTEELL---PQPH 57 (318)
T ss_dssp ----CEEEECCCTTT-------CS--HHHHHHHHTTTCCCEECSCEEHHHHHTTC-----------HHHHHHS---CCTT
T ss_pred CccCCCEEECCCCCC-------Cc--HHHHHHHHHHCcCEEEeCCEEEcccccCC-----------HhHHHhh---hCcC
Confidence 579999999999754 22 346666665 7899999988877543221 1346666 8999
Q ss_pred CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEec
Q 017733 101 GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIHG 180 (367)
Q Consensus 101 g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~ 180 (367)
|.++++||+ |+ .| ++|+++|++++++ ||+||||+
T Consensus 58 ~~~~~~QL~--g~-------------------------------~~------------~~~~~aa~~a~~~-~d~Iein~ 91 (318)
T 1vhn_A 58 ERNVAVQIF--GS-------------------------------EP------------NELSEAARILSEK-YKWIDLNA 91 (318)
T ss_dssp CTTEEEEEE--CS-------------------------------CH------------HHHHHHHHHHTTT-CSEEEEEE
T ss_pred CCeEEEEeC--CC-------------------------------CH------------HHHHHHHHHHHHh-CCEEEEEC
Confidence 999999996 32 01 6899999999999 99999999
Q ss_pred ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhc
Q 017733 181 ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKF 260 (367)
Q Consensus 181 ~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~ 260 (367)
+| |..|.|+|+|||+++||++++.|+|++||++++ .+|+||+++. +. .. +..++++.+++.
T Consensus 92 gc---------P~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~-~pv~vKir~G--~~---~~----~~~~~a~~l~~~ 152 (318)
T 1vhn_A 92 GC---------PVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS-GKFSVKTRLG--WE---KN----EVEEIYRILVEE 152 (318)
T ss_dssp CC---------CCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCS-SEEEEEEESC--SS---SC----CHHHHHHHHHHT
T ss_pred CC---------CcHhcCCCCcccchhhCHHHHHHHHHHHHHhhC-CCEEEEecCC--CC---hH----HHHHHHHHHHHh
Confidence 96 999999999999999999999999999999997 6899999872 11 11 123789999999
Q ss_pred CccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 261 KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 261 Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
|+|+|+++.++.......+...+.++.+++ ++||+++||+ |+++++++|+.+.+|+|++||++++||+|+.++++
T Consensus 153 G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~l~~~~~~ 228 (318)
T 1vhn_A 153 GVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPWIFKQIKD 228 (318)
T ss_dssp TCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTTHHHHHHH
T ss_pred CCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcchHHHHHH
Confidence 999999997765433333334456666777 8999999999 89999999996559999999999999999999988
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=3e-35 Score=284.88 Aligned_cols=232 Identities=16% Similarity=0.151 Sum_probs=188.8
Q ss_pred eeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHHcCC
Q 017733 23 NLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQKGG 102 (367)
Q Consensus 23 ~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~~g~ 102 (367)
+|||||+++||.. +|+..++|+.+.+.|.|+++||++.+++. ++++. +++++ +|..+.
T Consensus 1 ~l~nriv~APM~g-------~td~~~r~~~r~~Gg~gli~te~~~~~~~---------~~~~~-----~~~~~-~~~~~~ 58 (350)
T 3b0p_A 1 MLDPRLSVAPMVD-------RTDRHFRFLVRQVSLGVRLYTEMTVDQAV---------LRGNR-----ERLLA-FRPEEH 58 (350)
T ss_dssp -CCCSEEECCCTT-------TSSHHHHHHHHHHCSSSBEECCCEEHHHH---------HHSCH-----HHHHC-CCGGGC
T ss_pred CCCCCEEECCCCC-------CCHHHHHHHHHHcCCCCEEEeCCEEechh---------hcCCH-----HHHhc-cCCCCC
Confidence 4899999999964 47888888877764459999998877532 23332 46666 799999
Q ss_pred eeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEeccc
Q 017733 103 IIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGAN 182 (367)
Q Consensus 103 ~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~ 182 (367)
++++||+ |+ . .++|+++|++++++|||+||||++|
T Consensus 59 p~~vQL~--g~-------------------------------~------------p~~~~~aA~~a~~~G~D~IeIn~gc 93 (350)
T 3b0p_A 59 PIALQLA--GS-------------------------------D------------PKSLAEAARIGEAFGYDEINLNLGC 93 (350)
T ss_dssp SEEEEEE--CS-------------------------------C------------HHHHHHHHHHHHHTTCSEEEEEECC
T ss_pred eEEEEeC--CC-------------------------------C------------HHHHHHHHHHHHHcCCCEEEECCcC
Confidence 9999996 21 1 1689999999999999999999996
Q ss_pred chHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCc
Q 017733 183 GYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKL 262 (367)
Q Consensus 183 gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gv 262 (367)
|..|.|+|+||++++||++++.++|+++|++++ .+|.+|++.. +. ...+.+++.++++.++++|+
T Consensus 94 ---------P~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~-~PV~vKiR~g--~~---~~~~~~~~~~~a~~l~~aG~ 158 (350)
T 3b0p_A 94 ---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR-VPVTVKMRLG--LE---GKETYRGLAQSVEAMAEAGV 158 (350)
T ss_dssp ---------CSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCS-SCEEEEEESC--BT---TCCCHHHHHHHHHHHHHTTC
T ss_pred ---------CCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhC-CceEEEEecC--cC---ccccHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999994 5788877642 11 12345678899999999999
Q ss_pred cEEEEecCCccccC-------CchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 263 LYLHVIEPRMIQLT-------DKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 263 d~i~v~~~~~~~~~-------~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
|+|+++.++..... ..+.....++.+++.+ ++||+++||| |+++++++|+ | +|+|++||+++.||+|++
T Consensus 159 d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-G-aD~V~iGRa~l~~P~l~~ 236 (350)
T 3b0p_A 159 KVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-R-VDGVMLGRAVYEDPFVLE 236 (350)
T ss_dssp CEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-T-SSEEEECHHHHHCGGGGT
T ss_pred CEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-C-CCEEEECHHHHhCcHHHH
Confidence 99999987532111 1123567889999999 8999999999 8999999997 7 999999999999999999
Q ss_pred HHHhC
Q 017733 334 RFELN 338 (367)
Q Consensus 334 k~~~g 338 (367)
+++++
T Consensus 237 ~i~~~ 241 (350)
T 3b0p_A 237 EADRR 241 (350)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 99864
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.97 E-value=2e-29 Score=242.98 Aligned_cols=249 Identities=12% Similarity=0.078 Sum_probs=188.0
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCC-CCCCCCCCcCCCHHhh------
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNT-AQGYPNTPGIWTKEQV------ 87 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~-g~~~~~~~~~~~~~~~------ 87 (367)
|++|+++++||||+++++. ..++ +||+.+++ |+|+|+++.+.+.+. |...+....+++|+.+
T Consensus 46 ~~~i~g~~l~npi~~aag~---~~~~-------~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~ 115 (336)
T 1f76_A 46 PVNCMGLTFKNPLGLAAGL---DKDG-------ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGF 115 (336)
T ss_dssp CEEETTEEESSSEEECTTS---STTC-------CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCC
T ss_pred CeEECCEEcCCCcEeCccc---CCcH-------HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCC
Confidence 7899999999999999763 2233 26788887 899999998887754 3333333344444432
Q ss_pred --hhhhHHHHHHHHc--CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017733 88 --EAWKPIVDAVHQK--GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 88 --~~~~~l~~~vh~~--g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
++++++.+.+|+. +.++++|+... ... +|++++++|++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~v~i~~~-------------------------------~~~-------~i~~~~~~~~~ 157 (336)
T 1f76_A 116 NNLGVDNLVENVKKAHYDGVLGINIGKN-------------------------------KDT-------PVEQGKDDYLI 157 (336)
T ss_dssp CBCCHHHHHHHHHHCCCCSEEEEEECCC-------------------------------TTS-------CGGGTHHHHHH
T ss_pred CCcCHHHHHHHHHhcccCCcEEEEecCC-------------------------------CCC-------cccccHHHHHH
Confidence 5667888888874 45788888310 000 24567899999
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh-------CCc-ceEEEeCCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI-------GAE-RVGMRLSPY 235 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v-------g~~-~i~vrls~~ 235 (367)
+|+++.+ |||+||||.+| |.+| |....++.+++.+++++||+++ |++ ||.||++++
T Consensus 158 aa~~~~~-g~d~iein~~s---------P~~~------g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~ 221 (336)
T 1f76_A 158 CMEKIYA-YAGYIAINISS---------PNTP------GLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPD 221 (336)
T ss_dssp HHHHHGG-GCSEEEEECCC---------SSST------TGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSC
T ss_pred HHHHHhc-cCCEEEEEccC---------CCCC------CcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCC
Confidence 9999976 99999999765 7766 2222345899999999999999 544 899999973
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc-------------CCc----hhhHHHHHHHHHhc--CCcE
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-------------TDK----SETQRSLLSMRRAF--EGTF 296 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-------------~~~----~~~~~~~~~ir~~~--~~pv 296 (367)
.+.++..++++.+++.|+|+|+++..+.... .+. +.....++.+++.+ ++||
T Consensus 222 ---------~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipV 292 (336)
T 1f76_A 222 ---------LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPI 292 (336)
T ss_dssp ---------CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCE
T ss_pred ---------CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCE
Confidence 2456778899999999999999986542110 011 11235677899988 7999
Q ss_pred EEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh-CCchHHHHHhC
Q 017733 297 IAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA-NPDLPKRFELN 338 (367)
Q Consensus 297 i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la-dP~l~~k~~~g 338 (367)
|++||+ |++++.++|+.| ||+|++||++++ ||+|++|+++|
T Consensus 293 i~~GGI~~~~da~~~l~~G-Ad~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 293 IGVGGIDSVIAAREKIAAG-ASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp EEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCHHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHCC-CCEEEeeHHHHhcCcHHHHHHHhh
Confidence 999999 899999999999 999999999999 99999999875
No 24
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.93 E-value=2.1e-25 Score=212.87 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=175.0
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCC-CCCCCC----------CCcCCC
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNT-AQGYPN----------TPGIWT 83 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~-g~~~~~----------~~~~~~ 83 (367)
|+++++++|||||++||+... . +.+. ++..++ |+|+|+++.+.+.+. |...++ ..++.+
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~~--~----~~~~---~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVLC--S----TEED---LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CEEETTEEESSSEEECTTSSC--S----SHHH---HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred ceEECCEecCCCcEECCCCCC--C----CHHH---HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 789999999999999997521 1 2233 333344 799999998877763 221111 011222
Q ss_pred HHhhhhhhHHHHHHHH-cCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 017733 84 KEQVEAWKPIVDAVHQ-KGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFR 162 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh~-~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 162 (367)
. ..+.+.+......+ .+.++++||.. . .+++|+
T Consensus 76 ~-g~~~~~~~~~~~~~~~~~p~~~~i~g---------------------------------~------------~~~~~~ 109 (314)
T 2e6f_A 76 L-GFDFYLKYASDLHDYSKKPLFLSISG---------------------------------L------------SVEENV 109 (314)
T ss_dssp S-CHHHHHHHHHHTCCTTTCCEEEEECC---------------------------------S------------SHHHHH
T ss_pred c-CHHHHHHHHHHHhhcCCCcEEEEeCC---------------------------------C------------CHHHHH
Confidence 1 12222222221111 24566777631 0 136899
Q ss_pred HHHHHHHHhCCC---EEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 163 LAARNAIEAGFD---GVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 163 ~aA~~a~~aGfd---gVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++|+++.++||| +||||.+| |.+ +|.+.||++.++ +.++|++||++++ .||.||++++
T Consensus 110 ~~a~~~~~~g~d~~~~iein~~~---------P~~-~g~~~~g~~~~~----~~~ii~~vr~~~~-~Pv~vK~~~~---- 170 (314)
T 2e6f_A 110 AMVRRLAPVAQEKGVLLELNLSC---------PNV-PGKPQVAYDFEA----MRTYLQQVSLAYG-LPFGVKMPPY---- 170 (314)
T ss_dssp HHHHHHHHHHHHHCCEEEEECCC---------CCS-TTCCCGGGSHHH----HHHHHHHHHHHHC-SCEEEEECCC----
T ss_pred HHHHHHHHhCCCcCceEEEEcCC---------CCC-CCchhhcCCHHH----HHHHHHHHHHhcC-CCEEEEECCC----
Confidence 999999999999 99999765 777 688999988775 6899999999983 5899999973
Q ss_pred ccCCCChHHHHHHHHHHhhhcC-ccEEEEecCCc-----c----cc-----------CC---chhhHHHHHHHHHhc-CC
Q 017733 240 EAVDSNPEALGLYMAKALNKFK-LLYLHVIEPRM-----I----QL-----------TD---KSETQRSLLSMRRAF-EG 294 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~G-vd~i~v~~~~~-----~----~~-----------~~---~~~~~~~~~~ir~~~-~~ 294 (367)
.+.++..++++.++++| +|+|.++.... . .+ .. .+.....++.+++.+ ++
T Consensus 171 -----~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~i 245 (314)
T 2e6f_A 171 -----FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDK 245 (314)
T ss_dssp -----CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTS
T ss_pred -----CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCC
Confidence 23566788999999999 99999876541 1 00 00 112346778899999 89
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh-CCchHHHHHhCC
Q 017733 295 TFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA-NPDLPKRFELNA 339 (367)
Q Consensus 295 pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la-dP~l~~k~~~g~ 339 (367)
||+++||+ |++++.++|+.| +|+|++||+++. +|+|+++++++.
T Consensus 246 pvi~~GGI~~~~da~~~l~~G-Ad~V~ig~~~l~~~p~~~~~i~~~l 291 (314)
T 2e6f_A 246 LVFGCGGVYSGEDAFLHILAG-ASMVQVGTALQEEGPGIFTRLEDEL 291 (314)
T ss_dssp EEEEESSCCSHHHHHHHHHHT-CSSEEECHHHHHHCTTHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHcC-CCEEEEchhhHhcCcHHHHHHHHHH
Confidence 99999999 899999999999 999999999997 999999999873
No 25
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=99.93 E-value=5.4e-25 Score=209.76 Aligned_cols=244 Identities=14% Similarity=0.179 Sum_probs=176.2
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCC-CCCCCCC----------CcCCC
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNT-AQGYPNT----------PGIWT 83 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~-g~~~~~~----------~~~~~ 83 (367)
|++|+++++||||++||... +. +. ++++..++ |+|+|+++.+.+.+. |...++. .++.+
T Consensus 3 ~~~i~g~~l~npv~~Aag~~--~~----~~---~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 73 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVH--CM----TI---EDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPN 73 (311)
T ss_dssp CEEETTEEESSSEEECTTSS--CS----SH---HHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred ceEECCEEcCCCcEECCCCC--CC----CH---HHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 68899999999999998541 11 22 33444444 799999998877763 2222110 12222
Q ss_pred HHhhhhhhHHHHHHH-Hc--CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 017733 84 KEQVEAWKPIVDAVH-QK--GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVND 160 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh-~~--g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 160 (367)
. -.+.+.+.....+ .. +.++++||.. . .+++
T Consensus 74 ~-g~~~~~~~~~~~~~~~~~~~p~~~~i~g---------------------------------~------------~~~~ 107 (311)
T 1jub_A 74 L-GFDYYLDYVLKNQKENAQEGPIFFSIAG---------------------------------M------------SAAE 107 (311)
T ss_dssp S-CHHHHHHHHHHHHHHTCSSSCCEEEECC---------------------------------S------------SHHH
T ss_pred c-cHHHHHHHHHHHHHhcCCCCCEEEEcCC---------------------------------C------------CHHH
Confidence 1 1233322222222 34 6778888741 0 1368
Q ss_pred HHHHHHHHHHhCCC-EEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 161 FRLAARNAIEAGFD-GVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 161 f~~aA~~a~~aGfd-gVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
|+++|+++.++||| +||||.+| |.+ ++.+.||++.++ +.+++++||++++ .||.+|++++
T Consensus 108 ~~~~a~~~~~~g~d~~iein~~~---------P~~-~g~~~~g~~~e~----~~~iv~~vr~~~~-~Pv~vKi~~~---- 168 (311)
T 1jub_A 108 NIAMLKKIQESDFSGITELNLSC---------PNV-PGEPQLAYDFEA----TEKLLKEVFTFFT-KPLGVKLPPY---- 168 (311)
T ss_dssp HHHHHHHHHHSCCCSEEEEESCC---------CCS-SSCCCGGGCHHH----HHHHHHHHTTTCC-SCEEEEECCC----
T ss_pred HHHHHHHHHhcCCCeEEEEeccC---------CCC-CCcccccCCHHH----HHHHHHHHHHhcC-CCEEEEECCC----
Confidence 99999999999999 99999876 777 678899888775 6899999999883 5899999983
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCc-----c----ccC-----------C---chhhHHHHHHHHHhc--CC
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRM-----I----QLT-----------D---KSETQRSLLSMRRAF--EG 294 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~-----~----~~~-----------~---~~~~~~~~~~ir~~~--~~ 294 (367)
.+.++..++++.++++|+|+|.++.... . .+. . .+.....++.+++.+ ++
T Consensus 169 -----~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~i 243 (311)
T 1jub_A 169 -----FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEI 243 (311)
T ss_dssp -----CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTS
T ss_pred -----CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCC
Confidence 1345677889999999999999876531 1 000 1 112346778899999 89
Q ss_pred cEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh-CCchHHHHHhCC
Q 017733 295 TFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA-NPDLPKRFELNA 339 (367)
Q Consensus 295 pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la-dP~l~~k~~~g~ 339 (367)
||+++||+ |++++.++|+.| +|+|++||+++. +|+++++++++.
T Consensus 244 pvi~~GGI~~~~da~~~l~~G-Ad~V~vg~~~l~~~p~~~~~i~~~l 289 (311)
T 1jub_A 244 QIIGTGGIETGQDAFEHLLCG-ATMLQIGTALHKEGPAIFDRIIKEL 289 (311)
T ss_dssp EEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHCTHHHHHHHHHH
T ss_pred CEEEECCCCCHHHHHHHHHcC-CCEEEEchHHHhcCcHHHHHHHHHH
Confidence 99999999 899999999999 999999999997 999999999873
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.93 E-value=1.8e-25 Score=212.80 Aligned_cols=242 Identities=15% Similarity=0.117 Sum_probs=175.5
Q ss_pred ccccCCeeeCCceeeCc-CCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCCCCCC-----------CCCCcCC
Q 017733 16 AYKMGQFNLSHRMVLAP-LTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNTAQGY-----------PNTPGIW 82 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~ap-m~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~g~~~-----------~~~~~~~ 82 (367)
|++|++++|+|||+++| |... ++. +.+..+. |.|+++++.+.+.|..... .+..+++
T Consensus 8 ~~~~~g~~l~npi~~aag~~~~-------~~~---~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~ 77 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFGF-------GEE---YAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQ 77 (311)
T ss_dssp CEEETTEEESSSEEECTTSSTT-------STT---GGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCC
T ss_pred ceEECCEECCCCcEECCCCCCC-------CHH---HHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCC
Confidence 68999999999999999 5332 122 2233333 7899999977665442111 0123344
Q ss_pred CHHhhhhh-hHHHHHHHH-c-CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 017733 83 TKEQVEAW-KPIVDAVHQ-K-GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVN 159 (367)
Q Consensus 83 ~~~~~~~~-~~l~~~vh~-~-g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 159 (367)
+... +.+ +++.+.+++ . +.++++||... . ++
T Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~p~~v~l~~~---------------------------------~------------~~ 111 (311)
T 1ep3_A 78 NPGL-EVIMTEKLPWLNENFPELPIIANVAGS---------------------------------E------------EA 111 (311)
T ss_dssp BCCH-HHHHHTHHHHHHHHCTTSCEEEEECCS---------------------------------S------------HH
T ss_pred CcCH-HHHHHHHHHHHHhcCCCCcEEEEEcCC---------------------------------C------------HH
Confidence 3322 233 445556665 5 77889998410 0 26
Q ss_pred HHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+|.++|+++.+ +|||+||||.+ ||.+|+|.+.||+ +.+++.++++++|+.++ .+|.+|++++.
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~---------~p~~~~g~~~~g~----~~~~~~eii~~v~~~~~-~pv~vk~~~~~-- 175 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNIS---------CPNVKHGGQAFGT----DPEVAAALVKACKAVSK-VPLYVKLSPNV-- 175 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECC---------SEEGGGTTEEGGG----CHHHHHHHHHHHHHHCS-SCEEEEECSCS--
T ss_pred HHHHHHHHHhccCCCCEEEEeCC---------CCCCCCchhhhcC----CHHHHHHHHHHHHHhcC-CCEEEEECCCh--
Confidence 79999999998 99999999954 4888988888875 57899999999999984 58999998731
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----------------cCCchh----hHHHHHHHHHhcCCcEEE
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----------------LTDKSE----TQRSLLSMRRAFEGTFIA 298 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----------------~~~~~~----~~~~~~~ir~~~~~pvi~ 298 (367)
.+ ..++++.++++|+|+|+++...... ....+. ....++.+++.+++||++
T Consensus 176 -----~~----~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia 246 (311)
T 1ep3_A 176 -----TD----IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIG 246 (311)
T ss_dssp -----SC----SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEE
T ss_pred -----HH----HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEE
Confidence 11 2357888999999999995421100 001111 235677888889999999
Q ss_pred eCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCC
Q 017733 299 AGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNA 339 (367)
Q Consensus 299 ~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~ 339 (367)
+||+ +++++.++|+.| +|+|++||+++.+|+++++++++.
T Consensus 247 ~GGI~~~~d~~~~l~~G-Ad~V~vg~~~l~~p~~~~~i~~~l 287 (311)
T 1ep3_A 247 MGGVANAQDVLEMYMAG-ASAVAVGTANFADPFVCPKIIDKL 287 (311)
T ss_dssp CSSCCSHHHHHHHHHHT-CSEEEECTHHHHCTTHHHHHHHHH
T ss_pred ECCcCCHHHHHHHHHcC-CCEEEECHHHHcCcHHHHHHHHHH
Confidence 9999 899999999999 999999999999999999998863
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.92 E-value=8.9e-25 Score=216.07 Aligned_cols=248 Identities=11% Similarity=0.048 Sum_probs=178.2
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCC-CCCCCCCCcCCCH-Hhh-----
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNT-AQGYPNTPGIWTK-EQV----- 87 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~-g~~~~~~~~~~~~-~~~----- 87 (367)
|++|++++++|||+++++... ++ .+|+.+++ |+|.|+++.+.+.|. |...++...+.++ ..+
T Consensus 83 ~~~i~Gl~~~NPvglAAG~dk---~~-------~~~~~l~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~Gf 152 (443)
T 1tv5_A 83 CTNIKHLDFINPFGVAAGFDK---NG-------VCIDSILKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGF 152 (443)
T ss_dssp CEEETTEEESSSEEECTTTTT---TC-------SSHHHHHTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCS
T ss_pred CeEECCEEeCCCcEECCcccC---cc-------HHHHHHHhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeecccc
Confidence 689999999999999998532 22 24666776 899999997766543 2222222222233 222
Q ss_pred --hhhhHHHHHHHHc-----------CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHH
Q 017733 88 --EAWKPIVDAVHQK-----------GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEI 154 (367)
Q Consensus 88 --~~~~~l~~~vh~~-----------g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI 154 (367)
+++..+++.+++. ...+++||.- . + ++
T Consensus 153 nN~G~~~~~~~l~~~~~~~~~~~~~~~~~vgvni~~--------------------------------~---~-----~~ 192 (443)
T 1tv5_A 153 NNMGCDKVTENLILFRKRQEEDKLLSKHIVGVSIGK--------------------------------N---K-----DT 192 (443)
T ss_dssp CBSCHHHHHHHHHHHHHHHHHCSTTTTCEEEEEECC--------------------------------C---T-----TC
T ss_pred CChhHHHHHHHHHHHhhhcccccccCCceEEEEecC--------------------------------c---c-----cc
Confidence 5566677776643 1345555521 0 0 11
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh-----------
Q 017733 155 PKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI----------- 223 (367)
Q Consensus 155 ~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v----------- 223 (367)
++.+++|+++|+++.+ ++|+||||.+| |+++ |.......+++.++|++||+++
T Consensus 193 ~~~~~dy~~~a~~l~~-~aD~ieiNisc---------Pnt~------Glr~lq~~~~l~~il~~v~~~~~~~~~~~~~~~ 256 (443)
T 1tv5_A 193 VNIVDDLKYCINKIGR-YADYIAINVSS---------PNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMND 256 (443)
T ss_dssp SCHHHHHHHHHHHHGG-GCSEEEEECCC---------TTST------TGGGGGSHHHHHHHHHHHHHHHHHHC-------
T ss_pred hHHHHHHHHHHHHHhc-CCCEEEEeccC---------CCCc------ccccccCHHHHHHHHHHHHHHHhhhcccCcccc
Confidence 2457899999999876 89999999988 7665 3233344588999999999864
Q ss_pred -------------------------------------C-Ccc-eEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccE
Q 017733 224 -------------------------------------G-AER-VGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLY 264 (367)
Q Consensus 224 -------------------------------------g-~~~-i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~ 264 (367)
+ +.| |.||++++ .+.++..++++.+++.|+|+
T Consensus 257 g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd---------~~~ed~~~iA~~~~~aGaDg 327 (443)
T 1tv5_A 257 ESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLLETNIDG 327 (443)
T ss_dssp -------------------------------CCCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHHHTTCSE
T ss_pred ccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCC---------CCHHHHHHHHHHHHHcCCCE
Confidence 1 237 89999983 23456788999999999999
Q ss_pred EEEecCCccccC-----------Cch----hhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHH
Q 017733 265 LHVIEPRMIQLT-----------DKS----ETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 265 i~v~~~~~~~~~-----------~~~----~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l 326 (367)
|.++..+..... +.+ .....++.+++.+ ++|||++||| |+++|.++|+.| ||+|+++|+++
T Consensus 328 I~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aG-Ad~Vqigrall 406 (443)
T 1tv5_A 328 MIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLV 406 (443)
T ss_dssp EEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTT-EEEEEESHHHH
T ss_pred EEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHH
Confidence 999887542111 111 1235678899998 8999999999 899999999999 99999999999
Q ss_pred h-CCchHHHHHhCC
Q 017733 327 A-NPDLPKRFELNA 339 (367)
Q Consensus 327 a-dP~l~~k~~~g~ 339 (367)
. +|+|+++++++.
T Consensus 407 ~~gP~l~~~i~~~l 420 (443)
T 1tv5_A 407 FNGMKSAVQIKREL 420 (443)
T ss_dssp HHGGGHHHHHHHHH
T ss_pred hcChHHHHHHHHHH
Confidence 7 999999999873
No 28
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.84 E-value=2e-19 Score=172.79 Aligned_cols=243 Identities=12% Similarity=0.197 Sum_probs=163.7
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCC-CCCCCC----------CCcCCCH
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNT-AQGYPN----------TPGIWTK 84 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~-g~~~~~----------~~~~~~~ 84 (367)
+.++.|++|||.|+.|+=.-. . +.+.++++... |+|.|+++.+...|. |...++ ..++-+.
T Consensus 39 ~~~~~Gl~~~NPv~lAaG~~~-----~-~~e~~~~~~~~--G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~ 110 (345)
T 3oix_A 39 HTTIGSFDFDNCLMNAAGVYC-----M-TREELAAIDHS--EAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNL 110 (345)
T ss_dssp CEEETTEEESCSEEECTTSSC-----S-SHHHHHHHHTS--SCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBS
T ss_pred CeEECCEECCCCCEEcCCCCC-----C-CHHHHHHHHHc--CCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCCh
Confidence 478999999999999865322 1 33444443321 688888886655532 222221 1122221
Q ss_pred Hhhhhh-hHHHHHH-HHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 017733 85 EQVEAW-KPIVDAV-HQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFR 162 (367)
Q Consensus 85 ~~~~~~-~~l~~~v-h~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~ 162 (367)
-++.| +++.... +..+.++++||.- .. .++|+
T Consensus 111 -G~~~~~~~l~~~~~~~~~~pvivsI~g---------------------------------~~------------~~d~~ 144 (345)
T 3oix_A 111 -GINYYLDYVTELQKQPDSKNHFLSLVG---------------------------------MS------------PEETH 144 (345)
T ss_dssp -CHHHHHHHHHHHHHSTTCCCCEEEECC---------------------------------SS------------HHHHH
T ss_pred -hHHHHHHHHHHHhhccCCCCEEEEecC---------------------------------CC------------HHHHH
Confidence 12222 2222222 2356788999841 01 27899
Q ss_pred HHHHHHHHhCCC-EEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 163 LAARNAIEAGFD-GVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 163 ~aA~~a~~aGfd-gVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
++|+++.++|+| +||||.+| |+++ |+ .+......+.+++++||+++. .||.|||+++
T Consensus 145 ~~a~~l~~~g~~d~ielNisC---------Pn~~------G~~~l~~~~e~l~~il~av~~~~~-~PV~vKi~p~----- 203 (345)
T 3oix_A 145 TILXMVEASKYQGLVELNLSC---------PNVP------GXPQIAYDFETTDQILSEVFTYFT-KPLGIKLPPY----- 203 (345)
T ss_dssp HHHHHHHHSSCCSEEEEECSC---------CCST------TCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCC-----
T ss_pred HHHHHHhccCCCcEEEEecCC---------CCcC------CchhhcCCHHHHHHHHHHHHHHhC-CCeEEEECCC-----
Confidence 999999999998 99999998 5443 33 465667788999999999884 5899999984
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEe----------cCCccc-----c--CCchh----hHHHHHHHHHhc--CCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVI----------EPRMIQ-----L--TDKSE----TQRSLLSMRRAF--EGTFI 297 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~----------~~~~~~-----~--~~~~~----~~~~~~~ir~~~--~~pvi 297 (367)
.+.++..++++.+...++++++.+ ..+... . .+.++ ....++.+++.+ ++|||
T Consensus 204 ----~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipII 279 (345)
T 3oix_A 204 ----FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQII 279 (345)
T ss_dssp ----CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEE
T ss_pred ----CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEE
Confidence 124455556666656667766533 111100 0 11122 246778899998 68999
Q ss_pred EeCCC-CHHHHHHHHHcCCCcEEcccHH-HHhCCchHHHHHhC
Q 017733 298 AAGGY-SRDEGNKAVAANYTDLVAFGRL-FLANPDLPKRFELN 338 (367)
Q Consensus 298 ~~Ggi-t~~~a~~~L~~G~~D~V~~gR~-~ladP~l~~k~~~g 338 (367)
++||| |++++.++|+.| +|+|++||+ ++.+|+|+++++++
T Consensus 280 g~GGI~s~~da~~~l~aG-Ad~V~igra~~~~gP~~~~~i~~~ 321 (345)
T 3oix_A 280 GTGGVXTGRDAFEHILCG-ASMVQIGTALHQEGPQIFKRITKE 321 (345)
T ss_dssp EESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHH
T ss_pred EECCCCChHHHHHHHHhC-CCEEEEChHHHhcChHHHHHHHHH
Confidence 99999 899999999999 999999999 89999999999886
No 29
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.83 E-value=5.8e-19 Score=170.02 Aligned_cols=244 Identities=12% Similarity=0.125 Sum_probs=166.0
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCC-CCCCCC----------CCcCCCH
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNT-AQGYPN----------TPGIWTK 84 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~-g~~~~~----------~~~~~~~ 84 (367)
..++.|++|||.|+.|+=.-. . +.+.++++... |+|-|++..+...|. |...++ ..++.+.
T Consensus 38 ~~~~~Gl~~~NPv~lAAG~~~-----~-~~e~~~~l~~~--G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~ 109 (354)
T 4ef8_A 38 QVNLLNNTFANPFMNAAGVMC-----T-TTEELVAMTES--ASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNN 109 (354)
T ss_dssp CEEETTEEESSSEEECTTSSC-----S-SHHHHHHHHHS--SCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBC
T ss_pred ceEECCEECCCCCEeccCCCC-----C-CHHHHHHHHHc--CCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCc
Confidence 378899999999998876432 1 34444444332 688888885554432 222221 1122221
Q ss_pred HhhhhhhHHHHHHH-HcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017733 85 EQVEAWKPIVDAVH-QKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 85 ~~~~~~~~l~~~vh-~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
-++.|.+.....+ ..+.++++||+- .. .++|++
T Consensus 110 -G~~~~~~~l~~~~~~~~~pvivsI~G---------------------------------~~------------~~d~~~ 143 (354)
T 4ef8_A 110 -GFDFYLAYAAEQHDYGKKPLFLSMSG---------------------------------LS------------MRENVE 143 (354)
T ss_dssp -CHHHHHHHHHHTCCTTTCCEEEEECC---------------------------------SS------------HHHHHH
T ss_pred -CHHHHHHHHHHHhhcCCCcEEEEecc---------------------------------CC------------HHHHHH
Confidence 1222222112222 235678888731 01 268999
Q ss_pred HHHHHH---HhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 164 AARNAI---EAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 164 aA~~a~---~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+|+++. ++|+|+||||.+| |++. . |..+......+.+++++||+++. .||.||++++
T Consensus 144 ~a~~l~~~~~~g~d~ielNisC---------Pn~~----g-g~~l~~~~e~~~~il~av~~~~~-~PV~vKi~p~----- 203 (354)
T 4ef8_A 144 MCKRLAAVATEKGVILELNLSC---------PNVP----G-KPQVAYDFDAMRQCLTAVSEVYP-HSFGVKMPPY----- 203 (354)
T ss_dssp HHHHHHHHHHHHCCEEEEECSS---------CCST----T-SCCGGGSHHHHHHHHHHHHHHCC-SCEEEEECCC-----
T ss_pred HHHHHhhhhhcCCCEEEEeCCC---------CCCC----C-chhhccCHHHHHHHHHHHHHhhC-CCeEEEecCC-----
Confidence 999988 6899999999998 5442 1 33565667788999999999984 4999999984
Q ss_pred cCCCChHHHHHHHHHHhhhcC-ccEEEEecCC-----cc-----------cc---CCc----hhhHHHHHHHHHhc-CCc
Q 017733 241 AVDSNPEALGLYMAKALNKFK-LLYLHVIEPR-----MI-----------QL---TDK----SETQRSLLSMRRAF-EGT 295 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~G-vd~i~v~~~~-----~~-----------~~---~~~----~~~~~~~~~ir~~~-~~p 295 (367)
.+.++..++++.+++.| +|.|.+++.. .. .. .+. +.....++.+++.. ++|
T Consensus 204 ----~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ip 279 (354)
T 4ef8_A 204 ----FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKL 279 (354)
T ss_dssp ----CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSE
T ss_pred ----CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCC
Confidence 13455677888888998 9999764321 00 00 011 22356678888887 699
Q ss_pred EEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC-CchHHHHHhC
Q 017733 296 FIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN-PDLPKRFELN 338 (367)
Q Consensus 296 vi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad-P~l~~k~~~g 338 (367)
||++||+ |.+++.++|..| +|+|++||+++.| |+++++++++
T Consensus 280 II~~GGI~s~~da~~~l~aG-Ad~V~vgra~l~~GP~~~~~i~~~ 323 (354)
T 4ef8_A 280 IFGCGGVYTGEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSE 323 (354)
T ss_dssp EEEESCCCSHHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHH
T ss_pred EEEECCcCCHHHHHHHHHcC-CCEEEEhHHHHHhCHHHHHHHHHH
Confidence 9999999 899999999999 9999999999999 9999999876
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.81 E-value=1.2e-18 Score=190.00 Aligned_cols=248 Identities=13% Similarity=0.135 Sum_probs=169.2
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcCCCeeEEEccceeCCC--CCCCCCC---------------
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTTNGGFLIAEATGVSNT--AQGYPNT--------------- 78 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~g~Glii~e~~~v~~~--g~~~~~~--------------- 78 (367)
++++.|++++|+|+++||+... +..+...+... |.|+++++.+..++. +...+..
T Consensus 534 s~~~~G~~~~nPv~lAa~~~~~------~~~~~~~~~~~--g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~ 605 (1025)
T 1gte_A 534 SVEMAGLKFINPFGLASAAPTT------SSSMIRRAFEA--GWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQS 605 (1025)
T ss_dssp CEEETTEEESSSEEECSSGGGS------SHHHHHHHHHH--TCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCS
T ss_pred eeeeccccccCcccccCCCCCC------CHHHHHHHHHC--CcCeEEeceecccccccCCCCccEEeccccccccCCchh
Confidence 3677899999999999996531 23333322211 688998776654321 1111000
Q ss_pred ----CcCCCHHhhhhhhHHHHHHHHc--CCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChH
Q 017733 79 ----PGIWTKEQVEAWKPIVDAVHQK--GGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIE 152 (367)
Q Consensus 79 ----~~~~~~~~~~~~~~l~~~vh~~--g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~ 152 (367)
.-++++..++.+.+-...+++. +.++++|+.-. ..
T Consensus 606 ~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g--------------------------------~~------- 646 (1025)
T 1gte_A 606 SFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCS--------------------------------YN------- 646 (1025)
T ss_dssp CEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCC--------------------------------SC-------
T ss_pred heeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCC--------------------------------CC-------
Confidence 0112233344444433444442 46777776310 01
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL 232 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl 232 (367)
.++|.++|+++.++|||+|+||++| |.. .+.+.||++++++.+++.+++++||++++ .||.||+
T Consensus 647 -----~~~~~~~a~~~~~~g~d~iein~~~---------P~~-~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~ 710 (1025)
T 1gte_A 647 -----KNDWMELSRKAEASGADALELNLSC---------PHG-MGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKL 710 (1025)
T ss_dssp -----HHHHHHHHHHHHHTTCSEEEEECCC---------BCC-CC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEE
T ss_pred -----HHHHHHHHHHHHhcCCCEEEEECCC---------CCC-CCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEe
Confidence 1678999999999999999999887 666 67789999999999999999999999983 5899999
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCC----------------------ccccCCchhh----HHHHH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPR----------------------MIQLTDKSET----QRSLL 286 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~----------------------~~~~~~~~~~----~~~~~ 286 (367)
+++. . +..++++.+++.|+|+|++++.. .....+.+.. ...+.
T Consensus 711 ~~~~-------~----~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~ 779 (1025)
T 1gte_A 711 TPNV-------T----DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVT 779 (1025)
T ss_dssp CSCS-------S----CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHH
T ss_pred CCCh-------H----HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHH
Confidence 8731 1 24568889999999999995311 0000111112 35678
Q ss_pred HHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh-CCchHHHHHhC
Q 017733 287 SMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA-NPDLPKRFELN 338 (367)
Q Consensus 287 ~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la-dP~l~~k~~~g 338 (367)
.+++.+ ++|||++||| |++++.++|+.| +|+|++||+++. +|.+++++.++
T Consensus 780 ~v~~~~~~ipvi~~GGI~s~~da~~~l~~G-a~~v~vg~~~l~~~~~~~~~~~~~ 833 (1025)
T 1gte_A 780 TIARALPGFPILATGGIDSAESGLQFLHSG-ASVLQVCSAVQNQDFTVIQDYCTG 833 (1025)
T ss_dssp HHHHHSTTCCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTSCTTHHHHHHHH
T ss_pred HHHHHcCCCCEEEecCcCCHHHHHHHHHcC-CCEEEEeeccccCCccHHHHHHHH
Confidence 889988 8999999999 899999999998 999999999997 88889888755
No 31
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.81 E-value=8.2e-19 Score=170.10 Aligned_cols=246 Identities=11% Similarity=0.050 Sum_probs=165.1
Q ss_pred ccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC-CCeeEEEccceeCCC-CCCCCCC------------CcC
Q 017733 16 AYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT-NGGFLIAEATGVSNT-AQGYPNT------------PGI 81 (367)
Q Consensus 16 Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~-g~Glii~e~~~v~~~-g~~~~~~------------~~~ 81 (367)
+.++.|++++|.|+.|+=... +|.- +..+.. |.|-|.++.+...|. |...|+. +|+
T Consensus 51 ~~~~~Gl~~~NPvglAaG~~~---~~~~-------~~~~~~~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~ 120 (367)
T 3zwt_A 51 EVRVLGHKFRNPVGIAAGFDK---HGEA-------VDGLYKMGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGF 120 (367)
T ss_dssp CEEETTEEESSSEEECTTSST---TSSS-------HHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCC
T ss_pred cEEECCEEcCCCCEeCCCcCC---CHHH-------HHHHHhcCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCC
Confidence 478899999999999965322 3322 233333 788899885554432 2222211 111
Q ss_pred CCHHhhhh-hhHHHHH------HHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHH
Q 017733 82 WTKEQVEA-WKPIVDA------VHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEI 154 (367)
Q Consensus 82 ~~~~~~~~-~~~l~~~------vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI 154 (367)
-+.. ++. ++++... .+..+.++++||...- .|.
T Consensus 121 ~N~G-~~~~~~~l~~~~~~~~~~~~~~~pv~vniggn~------------------------------------~t~--- 160 (367)
T 3zwt_A 121 NSHG-LSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNK------------------------------------TSV--- 160 (367)
T ss_dssp CBCC-HHHHHHHHHTTHHHHHHHHHTTCCEEEEECCCT------------------------------------TCS---
T ss_pred CCcc-HHHHHHHHHHHhhhccccccCCceEEEEEecCC------------------------------------CCC---
Confidence 1111 111 2222211 2235788999994210 010
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh------CCcce
Q 017733 155 PKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI------GAERV 228 (367)
Q Consensus 155 ~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v------g~~~i 228 (367)
.-+++|+++++++.+ +.|+||||.+| |++ . |+.+......+.+++++|+++. -..||
T Consensus 161 -~~~~dy~~~~~~~~~-~ad~ielNisC---------Pn~--~----G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv 223 (367)
T 3zwt_A 161 -DAAEDYAEGVRVLGP-LADYLVVNVSS---------PNT--A----GLRSLQGKAELRRLLTKVLQERDGLRRVHRPAV 223 (367)
T ss_dssp -CHHHHHHHHHHHHGG-GCSEEEEECCC---------TTS--T----TGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEE
T ss_pred -cCHHHHHHHHHHHhh-hCCEEEEECCC---------CCC--C----CccccCCHHHHHHHHHHHHHHHhhccccCCceE
Confidence 124788999888764 68999999999 543 2 3333344677889999998762 12389
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc-----------C--Cch----hhHHHHHHHHHh
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-----------T--DKS----ETQRSLLSMRRA 291 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-----------~--~~~----~~~~~~~~ir~~ 291 (367)
.||++++ .+.++..++++.++++|+|.|.++..+.... . +.+ .....++.+++.
T Consensus 224 ~vKi~p~---------~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~ 294 (367)
T 3zwt_A 224 LVKIAPD---------LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYAL 294 (367)
T ss_dssp EEEECSC---------CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHH
T ss_pred EEEeCCC---------CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHH
Confidence 9999983 2346678899999999999999987653211 0 111 124677889999
Q ss_pred c--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHH-hCCchHHHHHhC
Q 017733 292 F--EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFL-ANPDLPKRFELN 338 (367)
Q Consensus 292 ~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l-adP~l~~k~~~g 338 (367)
+ ++|||++||| |++++.++|+.| +|+|++||+++ .+|++++++.++
T Consensus 295 v~~~ipvI~~GGI~s~~da~~~l~~G-Ad~V~vgra~l~~gP~~~~~i~~~ 344 (367)
T 3zwt_A 295 TQGRVPIIGVGGVSSGQDALEKIRAG-ASLVQLYTALTFWGPPVVGKVKRE 344 (367)
T ss_dssp TTTCSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHHHCTHHHHHHHHH
T ss_pred cCCCceEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHhcCcHHHHHHHHH
Confidence 9 7999999999 899999999999 99999999996 579999999886
No 32
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.80 E-value=3e-18 Score=167.31 Aligned_cols=156 Identities=14% Similarity=0.100 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhC------------
Q 017733 157 IVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIG------------ 224 (367)
Q Consensus 157 ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg------------ 224 (367)
.+++|+++++++.+. +|.||||.+| |++. |..+......+.+++++||++..
T Consensus 197 ~~~Dy~~~a~~l~~~-ad~ieiNiSc---------PNt~------Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~ 260 (415)
T 3i65_A 197 IVDDLKYCINKIGRY-ADYIAINVSS---------PNTP------GLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEF 260 (415)
T ss_dssp HHHHHHHHHHHHGGG-CSEEEEECCC---------CC--------------CCHHHHHHHHHHHHHHHHHHHHCCSCHHH
T ss_pred cHHHHHHHHHHHHhh-CCEEEEECCC---------CCCC------CcccccCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 468999999998776 9999999999 5442 43344556788999999998741
Q ss_pred -------Ccc-eEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc---------C--Cch----hh
Q 017733 225 -------AER-VGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL---------T--DKS----ET 281 (367)
Q Consensus 225 -------~~~-i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~---------~--~~~----~~ 281 (367)
..| |.|||+++ .+.++..++++.+++.|+|.|.++..+.... . +.+ ..
T Consensus 261 ~~~~~~~~~P~V~VKi~pd---------~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~a 331 (415)
T 3i65_A 261 LWFNTTKKKPLVFVKLAPD---------LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDIS 331 (415)
T ss_dssp HCCSSSSSCCEEEEEECSC---------CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHH
T ss_pred cccccCCCCCeEEEEecCC---------CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHH
Confidence 347 89999994 2345678899999999999999987653211 0 111 12
Q ss_pred HHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC-CchHHHHHhC
Q 017733 282 QRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN-PDLPKRFELN 338 (367)
Q Consensus 282 ~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad-P~l~~k~~~g 338 (367)
...++.+++.+ ++|||++||| |.+++.++|+.| +|+|+++|+++.+ |+++.+++++
T Consensus 332 l~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~aG-Ad~VqIgra~l~~GP~~~~~i~~~ 391 (415)
T 3i65_A 332 TKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAG-ASVCQLYSCLVFNGMKSAVQIKRE 391 (415)
T ss_dssp HHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHHHT-EEEEEESHHHHHHGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHhcCHHHHHHHHHH
Confidence 35678899988 6899999999 899999999999 9999999999998 9999999887
No 33
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.64 E-value=3.8e-15 Score=144.63 Aligned_cols=231 Identities=16% Similarity=0.130 Sum_probs=151.3
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCC-ccCCCCCCHHHHHHHHhhc-C-CCeeEEEccceeCCCCCCCCCCCcCCCHHh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRI-RSYNHIPQPHAILYYSQRT-T-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQ 86 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~-~~~~g~~t~~~~~~y~~~a-~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~ 86 (367)
.+..=...+|.+.++++.|+.+||... .+ .|..+ . -+++.| + |.++++++....
T Consensus 65 ~~~~d~st~i~G~~l~~Pi~iAPma~~g~~---~~~~e-~-~la~aa~~~G~~~~~s~~~s~------------------ 121 (368)
T 2nli_A 65 VEAPDTSTEILGHKIKAPFIMAPIAAHGLA---HTTKE-A-GTARAVSEFGTIMSISAYSGA------------------ 121 (368)
T ss_dssp CSCCCCCEEETTEEESSSEEECCCSCGGGT---CTTHH-H-HHHHHHHHHTCCEEECTTCSS------------------
T ss_pred CccCCcceEECCEecCCceeecchhhccCC---CcHHH-H-HHHHHHHHcCCCEEeechHhH------------------
Confidence 344445678899999999999999722 11 22222 2 233333 3 788888773321
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAAR 166 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~ 166 (367)
.+.++.+. ..+.+.++||+.. + .+ +...+.++
T Consensus 122 --~le~v~~~--~~~~~~~~QLy~~------------------~--------------d~------------~~~~~~~~ 153 (368)
T 2nli_A 122 --TFEEISEG--LNGGPRWFQIYMA------------------K--------------DD------------QQNRDILD 153 (368)
T ss_dssp --CHHHHHHH--HTTCCEEEEECCB------------------S--------------SH------------HHHHHHHH
T ss_pred --HHHHHHHh--CCCCCEEEEEecc------------------C--------------CH------------HHHHHHHH
Confidence 11223221 1356889999431 0 00 23467788
Q ss_pred HHHHhCCCEEEEecccch-------HHHhhcCccc--ccC----CCCCCCch-----hhHhHHHHHHHHHHHHHhCCcce
Q 017733 167 NAIEAGFDGVEIHGANGY-------LIDQFMKDQV--NDR----TDEYGGSL-----ENRCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gy-------Ll~qFlsp~~--N~R----~D~yGgs~-----enr~r~~~eii~aiR~~vg~~~i 228 (367)
++.++||++|.|+.+|.+ +...|..|.+ |.+ .+..|..+ +.+.++..++|++||+.++ .||
T Consensus 154 ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~lr~~~~-~Pv 232 (368)
T 2nli_A 154 EAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEEIAGHSG-LPV 232 (368)
T ss_dssp HHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHHHHHHSS-SCE
T ss_pred HHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHHHHHHcC-CCE
Confidence 889999999999999987 5556655522 221 13445554 3366788999999999984 488
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHH
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRD 305 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~ 305 (367)
.||... +. +.++.++++|+|+|.++.....+....++....+..+++.+ ++|||++||| +.+
T Consensus 233 ivK~v~-----------~~----e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI~~g~ 297 (368)
T 2nli_A 233 FVKGIQ-----------HP----EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGVRRGE 297 (368)
T ss_dssp EEEEEC-----------SH----HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSCCSHH
T ss_pred EEEcCC-----------CH----HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCCCCHH
Confidence 888432 22 34667889999999996543222333445567788888887 6899999999 899
Q ss_pred HHHHHHHcCCCcEEcccHHHHhC
Q 017733 306 EGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 306 ~a~~~L~~G~~D~V~~gR~~lad 328 (367)
++.++|+.| +|+|++||+++..
T Consensus 298 D~~kalalG-Ad~V~iGr~~l~~ 319 (368)
T 2nli_A 298 HVAKALASG-ADVVALGRPVLFG 319 (368)
T ss_dssp HHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHHHcC-CCEEEECHHHHHH
Confidence 999999999 9999999999875
No 34
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.64 E-value=3e-15 Score=147.61 Aligned_cols=140 Identities=16% Similarity=0.261 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecc----cchHHHhhcCcccccCCCCCCCchh-hHhHHHHHHHHHHHHHhCCc-ceEEEe
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGA----NGYLIDQFMKDQVNDRTDEYGGSLE-NRCRFALEVVEAVVREIGAE-RVGMRL 232 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~----~gyLl~qFlsp~~N~R~D~yGgs~e-nr~r~~~eii~aiR~~vg~~-~i~vrl 232 (367)
++|+++|++++++||++|+|+.. |||+ |+||.+|+ +|||+.+ +++++..++|++||+++|++ .|.++.
T Consensus 152 ~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~~~~~~~---~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa 225 (410)
T 2gl5_A 152 EEYAEAARAALDDGYDAIKVDPLEIDRNGDD---CVFQNRNR---NYSGLLLADQLKMGEARIAAMREAMGDDADIIVEI 225 (410)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSSSBCTTSCB---TTTSSCCG---GGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccCCcccc---cccccccc---cccCccchhHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 57799999999999999999975 6887 88888875 7999986 79999999999999999987 677776
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+. ..+.+++.++++.|++.|++|++ ++. .+.+....+.|++.+++||++.+.+ +++++++++
T Consensus 226 n~---------~~~~~~ai~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 288 (410)
T 2gl5_A 226 HS---------LLGTNSAIQFAKAIEKYRIFLYE--EPI------HPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELL 288 (410)
T ss_dssp TT---------CSCHHHHHHHHHHHGGGCEEEEE--CSS------CSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHH
T ss_pred CC---------CCCHHHHHHHHHHHHhcCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 53 33578899999999999999987 331 1235677888999999999999998 899999999
Q ss_pred HcCCCcEEcc
Q 017733 312 AANYTDLVAF 321 (367)
Q Consensus 312 ~~G~~D~V~~ 321 (367)
+.+.+|+|.+
T Consensus 289 ~~~~~d~v~i 298 (410)
T 2gl5_A 289 EKQSIAVAQP 298 (410)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 9999999987
No 35
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=99.63 E-value=3e-15 Score=146.79 Aligned_cols=139 Identities=12% Similarity=0.146 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.+||||.++ +| |. .||||.++++++..++|++||+++|++ .|.++.+.
T Consensus 139 ~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~-----~~-~~-~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~--- 208 (392)
T 2poz_A 139 DEFARAVERPLKEGYGALKFYPLAQRVGSA-----LQ-HV-TRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSG--- 208 (392)
T ss_dssp HHHHHHTHHHHHTTCSEEEECCCCEEETTE-----EE-CC-BTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccc-----cc-cc-ccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 568899999999999999999999998443 46 54 999999999999999999999999987 68887764
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++|++ ++. .+.+....+.+++.+++||++.+.+ |+++++++++.|.+
T Consensus 209 ------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 209 ------GLTTDETIRFCRKIGELDICFVE--EPC------DPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQAC 274 (392)
T ss_dssp ------CSCHHHHHHHHHHHGGGCEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 331 1235667888999999999999998 79999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 275 d~v~i 279 (392)
T 2poz_A 275 GIIQP 279 (392)
T ss_dssp SEECC
T ss_pred CEEec
Confidence 99987
No 36
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.58 E-value=1.1e-13 Score=139.71 Aligned_cols=152 Identities=12% Similarity=0.055 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhCCCEEEEecccch-------HHHhhcCcccccC------CCCCCCc--h---hhHhHHHHHHHHHHHHH
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGY-------LIDQFMKDQVNDR------TDEYGGS--L---ENRCRFALEVVEAVVRE 222 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gy-------Ll~qFlsp~~N~R------~D~yGgs--~---enr~r~~~eii~aiR~~ 222 (367)
..+++++++++||++|.|+..+.. +-.+|.+|..+.+ .|.++|. + ..+.++..++|++||+.
T Consensus 262 ~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~~~~i~~lr~~ 341 (511)
T 1kbi_A 262 TDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLTWKDIEELKKK 341 (511)
T ss_dssp HHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhHHHHHHHHHHH
Confidence 456778888999999999998765 6778888864433 3445552 1 14667788999999999
Q ss_pred hCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-------CCc
Q 017733 223 IGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-------EGT 295 (367)
Q Consensus 223 vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-------~~p 295 (367)
++ .||.||... +.+ .++.++++|+|+|.++.....+..........+..+++.+ ++|
T Consensus 342 ~~-~PvivKgv~-----------~~e----~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ip 405 (511)
T 1kbi_A 342 TK-LPIVIKGVQ-----------RTE----DVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLE 405 (511)
T ss_dssp CS-SCEEEEEEC-----------SHH----HHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBE
T ss_pred hC-CcEEEEeCC-----------CHH----HHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcE
Confidence 84 588998533 123 4667889999999996533222233333456677777776 689
Q ss_pred EEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 296 FIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 296 vi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
||++||| +..++.++|+.| ||+|++||+++...
T Consensus 406 Via~GGI~~g~Dv~kaLalG-AdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 406 VFVDGGVRRGTDVLKALCLG-AKGVGLGRPFLYAN 439 (511)
T ss_dssp EEEESSCCSHHHHHHHHHHT-CSEEEECHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHHH
Confidence 9999999 899999999999 99999999999765
No 37
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=99.52 E-value=2.1e-13 Score=134.33 Aligned_cols=136 Identities=10% Similarity=0.182 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecc----cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGA----NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~----~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls 233 (367)
++|+++|++++++||++|+|+.. +||+ |+||..| +| .+++.++..++|++||+++|++ .|.++.+
T Consensus 154 ~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~~--~~-----~~~~~~~~~e~v~avR~a~G~d~~l~vDan 223 (407)
T 2o56_A 154 EQYAQAALTAVSEGYDAIKVDTVAMDRHGNW---NQQNLNG--PL-----TDKILRLGYDRMAAIRDAVGPDVDIIAEMH 223 (407)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSBCTTSCB---SCSCCCS--SC-----CHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHHHHHcCCCEEEEcccccCCcCcc---ccCcccC--CC-----chhHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 57899999999999999999975 4886 8888876 33 2789999999999999999987 6888776
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVA 312 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 312 (367)
. ..+.+++.++++.|++.|++|++ ++. .+.+....+.+++.+++||++.+.+ ++++++++++
T Consensus 224 ~---------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 286 (407)
T 2o56_A 224 A---------FTDTTSAIQFGRMIEELGIFYYE--EPV------MPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLE 286 (407)
T ss_dssp T---------CSCHHHHHHHHHHHGGGCCSCEE--CSS------CSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHH
T ss_pred C---------CCCHHHHHHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHH
Confidence 4 33578899999999999999987 331 1235677888999999999999998 7999999999
Q ss_pred cCCCcEEcc
Q 017733 313 ANYTDLVAF 321 (367)
Q Consensus 313 ~G~~D~V~~ 321 (367)
.+.+|+|.+
T Consensus 287 ~~~~d~v~i 295 (407)
T 2o56_A 287 NGSLSVIQP 295 (407)
T ss_dssp TTCCSEECC
T ss_pred cCCCCEEec
Confidence 999999976
No 38
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.52 E-value=7.5e-13 Score=126.90 Aligned_cols=132 Identities=17% Similarity=0.103 Sum_probs=101.5
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
|.+.+++++++|+|+|++|+++ | .++++++|+. + .+|.+++..
T Consensus 77 ~~~~~~~a~~~g~d~V~~~~g~---------p--------------------~~~i~~l~~~-g-~~v~~~v~~------ 119 (332)
T 2z6i_A 77 VEDIVDLVIEEGVKVVTTGAGN---------P--------------------SKYMERFHEA-G-IIVIPVVPS------ 119 (332)
T ss_dssp HHHHHHHHHHTTCSEEEECSSC---------G--------------------GGTHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHHCCCCEEEECCCC---------h--------------------HHHHHHHHHc-C-CeEEEEeCC------
Confidence 5778889999999999999876 2 2467778764 3 467777643
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
.+ .++.+++.|+|+|.++........+.......+..+++.+++||+++||| +++++.++|+.| +|+|
T Consensus 120 ------~~----~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al~~G-AdgV 188 (332)
T 2z6i_A 120 ------VA----LAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLG-AEAV 188 (332)
T ss_dssp ------HH----HHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTT-CSEE
T ss_pred ------HH----HHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEE
Confidence 22 45667789999999965422111112334567888999999999999999 699999999998 9999
Q ss_pred cccHHHHhCCchH------HHHHhCCC
Q 017733 320 AFGRLFLANPDLP------KRFELNAP 340 (367)
Q Consensus 320 ~~gR~~ladP~l~------~k~~~g~~ 340 (367)
.+||+++++|++. +++.++..
T Consensus 189 ~vGs~~l~~~e~~~~~~~k~~~~~~~~ 215 (332)
T 2z6i_A 189 QVGTRFVVAKESNAHPNYKEKILKARD 215 (332)
T ss_dssp EECHHHHTBTTCCSCHHHHHHHHHCCT
T ss_pred EecHHHhcCccccccHHHHHHHHhCCC
Confidence 9999999999887 88887754
No 39
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.49 E-value=4.8e-13 Score=131.55 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecc----cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGA----NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~----~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls 233 (367)
++|+++|++++++||++|+|+.. |||+ |+||..|. | .+++.++..++|++||+++|++ .|.++.+
T Consensus 148 e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~---~~s~~~g~--~-----~~~~~~~~~e~v~avr~avG~d~~l~vDan 217 (403)
T 2ox4_A 148 EEYAEEALKAVAEGYDAVKVDVLAHDRNGSR---EGVFLEGP--L-----PSETIKIGVERVEAIRNAVGPDVDIIVENH 217 (403)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSSCTTSCC---TTCCCSSS--C-----CHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccCCcccc---ccCcccCC--C-----chHHHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 56789999999999999999974 6775 99987662 2 3789999999999999999987 6777765
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVA 312 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 312 (367)
. ..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ |+++++++++
T Consensus 218 ~---------~~~~~~ai~~~~~l~~~~i~~iE--~P~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 280 (403)
T 2ox4_A 218 G---------HTDLVSAIQFAKAIEEFNIFFYE--EIN------TPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLE 280 (403)
T ss_dssp T---------CSCHHHHHHHHHHHGGGCEEEEE--CCS------CTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHH
T ss_pred C---------CCCHHHHHHHHHHHHhhCCCEEe--CCC------ChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHH
Confidence 4 33578899999999999999987 331 1234567888999999999999998 7999999999
Q ss_pred cCCCcEEcccH
Q 017733 313 ANYTDLVAFGR 323 (367)
Q Consensus 313 ~G~~D~V~~gR 323 (367)
.|.+|+|.+--
T Consensus 281 ~~~~d~v~ik~ 291 (403)
T 2ox4_A 281 DRSIDVIQPDL 291 (403)
T ss_dssp TTCCSEECCCH
T ss_pred cCCCCEEecCc
Confidence 99999998743
No 40
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.46 E-value=9.9e-12 Score=119.88 Aligned_cols=132 Identities=19% Similarity=0.168 Sum_probs=91.5
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHH--HHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRF--ALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~--~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
+.++|+|+|+||.+|. +++++|.. +..| +.++|+++|+.++ .||.+|+.++ ..
T Consensus 136 ~~~~gad~i~i~~~~~---~~~~~~~~-------------~~~~~~~~~~i~~vr~~~~-~Pv~vK~~~~--------~~ 190 (349)
T 1p0k_A 136 VEMIGANALQIHLNVI---QEIVMPEG-------------DRSFSGALKRIEQICSRVS-VPVIVKEVGF--------GM 190 (349)
T ss_dssp HHHTTCSEEEEEECTT---TTC---------------------CTTHHHHHHHHHHHCS-SCEEEEEESS--------CC
T ss_pred HHhcCCCeEEecccch---hhhcCCCC-------------CcchHHHHHHHHHHHHHcC-CCEEEEecCC--------CC
Confidence 4468999999999983 44554422 1222 6899999999884 5899998532 11
Q ss_pred hHHHHHHHHHHhhhcCccEEEEec--CCc-------cc-------cCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIE--PRM-------IQ-------LTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEG 307 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~--~~~-------~~-------~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a 307 (367)
+. +.++.+.++|+|+|.++. ++. .. ..........+..+++.+ ++|||++||+ |++++
T Consensus 191 ~~----~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~ 266 (349)
T 1p0k_A 191 SK----ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDV 266 (349)
T ss_dssp CH----HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCSHHHH
T ss_pred CH----HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCCHHHH
Confidence 23 356778889999999953 210 00 111223345677788877 7999999999 89999
Q ss_pred HHHHHcCCCcEEcccHHHHhCC
Q 017733 308 NKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 308 ~~~L~~G~~D~V~~gR~~ladP 329 (367)
.++|+.| +|+|++||+++..+
T Consensus 267 ~k~l~~G-Ad~V~iG~~~l~~~ 287 (349)
T 1p0k_A 267 AKAIALG-ASCTGMAGHFLKAL 287 (349)
T ss_dssp HHHHHTT-CSEEEECHHHHHHH
T ss_pred HHHHHcC-CCEEEEcHHHHHHH
Confidence 9999998 99999999999863
No 41
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.44 E-value=2.3e-12 Score=126.97 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecc--cchHHHhhcCcccccCCCCCCCchh--hHhHHHHHHHHHHHHHhCCc-ceEEEe
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGA--NGYLIDQFMKDQVNDRTDEYGGSLE--NRCRFALEVVEAVVREIGAE-RVGMRL 232 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~--~gyLl~qFlsp~~N~R~D~yGgs~e--nr~r~~~eii~aiR~~vg~~-~i~vrl 232 (367)
.++|+++|++++++||++|+|+.+ +|++. +| |||+++ +++++..++|++||+++|++ .|.++.
T Consensus 150 ~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~----~~--------~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDa 217 (410)
T 2qq6_A 150 NEEYIAVAREAVERGFDAIKLDVDDITGPLH----RD--------FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDM 217 (410)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSSSTTC----SC--------SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccCCccc----CC--------cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 378899999999999999999984 56542 11 888887 79999999999999999987 677766
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+. ..+.+++.++++.|++.+++||+ ++. .+.+....+.+++.+++||++.+.+ +++++++++
T Consensus 218 n~---------~~~~~~a~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 280 (410)
T 2qq6_A 218 HG---------RFDIPSSIRFARAMEPFGLLWLE--EPT------PPENLDALAEVRRSTSTPICAGENVYTRFDFRELF 280 (410)
T ss_dssp TT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHH
T ss_pred CC---------CCCHHHHHHHHHHHhhcCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHH
Confidence 53 33578899999999999999988 331 1235667888999999999999998 899999999
Q ss_pred HcCCCcEEcc
Q 017733 312 AANYTDLVAF 321 (367)
Q Consensus 312 ~~G~~D~V~~ 321 (367)
+.+.+|+|.+
T Consensus 281 ~~~~~d~v~i 290 (410)
T 2qq6_A 281 AKRAVDYVMP 290 (410)
T ss_dssp HTTCCSEECC
T ss_pred HcCCCCEEec
Confidence 9999999987
No 42
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.44 E-value=6.2e-12 Score=121.54 Aligned_cols=144 Identities=16% Similarity=0.158 Sum_probs=92.2
Q ss_pred HhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHH
Q 017733 170 EAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEAL 249 (367)
Q Consensus 170 ~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~ 249 (367)
..+.|.||||.+| |.+ . -+.++......+.++++++++++. .++.+|++++- +...
T Consensus 153 ~~~ad~ielNiSc---------Pn~--~---g~~~l~~~~~~~~~i~~~v~~~~~-~pv~vK~~p~~---------~~~~ 208 (354)
T 3tjx_A 153 TEKGVILELNLSC---------PNV--P---GKPQVAYDFDAMRQCLTAVSEVYP-HSFGVKMPPYF---------DFAA 208 (354)
T ss_dssp HHHCCEEEEECC-----------------------CTTSHHHHHHHHHHHHHHCC-SCEEEEECCCC---------SHHH
T ss_pred hcCCCEEEeeeCC---------CCC--c---chhhhccCHHHHHHHHHHHHHHhh-cccccccCCCC---------Cchh
Confidence 3589999999998 543 2 133556667889999999999985 48999999841 1222
Q ss_pred HHHHHHHhhhc-CccEEEEecC----------Ccc----cc-----CCchhh----HHHHHHHHHhc-CCcEEEeCCC-C
Q 017733 250 GLYMAKALNKF-KLLYLHVIEP----------RMI----QL-----TDKSET----QRSLLSMRRAF-EGTFIAAGGY-S 303 (367)
Q Consensus 250 ~~~l~~~L~~~-Gvd~i~v~~~----------~~~----~~-----~~~~~~----~~~~~~ir~~~-~~pvi~~Ggi-t 303 (367)
....+..+.+. +++.+..... +.. .. .+.++. ...++.+++.+ ++|||++||| |
T Consensus 209 ~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~pIIg~GGI~s 288 (354)
T 3tjx_A 209 FDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYT 288 (354)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred HHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCCcEEEeCCcCC
Confidence 22344444333 3444433211 000 00 011222 22344566665 5789999999 8
Q ss_pred HHHHHHHHHcCCCcEEcccHHHH-hCCchHHHHHhC
Q 017733 304 RDEGNKAVAANYTDLVAFGRLFL-ANPDLPKRFELN 338 (367)
Q Consensus 304 ~~~a~~~L~~G~~D~V~~gR~~l-adP~l~~k~~~g 338 (367)
.++|.+.|..| ||+|+++++++ .+|+++.++.++
T Consensus 289 ~~Da~e~i~aG-As~Vqv~Ta~~y~GP~~~~~I~~~ 323 (354)
T 3tjx_A 289 GEDAFLHVLAG-ASMVQVGTALQEEGPSIFERLTSE 323 (354)
T ss_dssp HHHHHHHHHHT-EEEEEECHHHHHHCTTHHHHHHHH
T ss_pred HHHHHHHHHcC-CCEEEEChhhhhcCchHHHHHHHH
Confidence 99999999999 99999999976 689999999876
No 43
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.42 E-value=3.1e-12 Score=124.87 Aligned_cols=135 Identities=14% Similarity=0.197 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.+|+| +++++ +.++..++|++||+++|++ +|.|+.+.
T Consensus 151 e~~~~~a~~~~~~Gf~~iKik~g~~~-----------------~~~~~-~~~~~~e~v~avr~a~g~d~~l~vDan~--- 209 (382)
T 1rvk_A 151 EDYGRFAETLVKRGYKGIKLHTWMPP-----------------VSWAP-DVKMDLKACAAVREAVGPDIRLMIDAFH--- 209 (382)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCTT-----------------STTCC-CHHHHHHHHHHHHHHHCTTSEEEEECCT---
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCc-----------------ccccc-chHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 67899999999999999999999875 12444 6889999999999999977 68887764
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-C-HHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-S-RDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t-~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++|++ ++. .+.+....+.+++.+++||++.+.+ | +++++++|+.|.
T Consensus 210 ------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~ 275 (382)
T 1rvk_A 210 ------WYSRTDALALGRGLEKLGFDWIE--EPM------DEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGA 275 (382)
T ss_dssp ------TCCHHHHHHHHHHHHTTTCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCC
Confidence 33578899999999999999987 331 1235667888999999999999998 8 999999999999
Q ss_pred CcEEcccHHHHhC
Q 017733 316 TDLVAFGRLFLAN 328 (367)
Q Consensus 316 ~D~V~~gR~~lad 328 (367)
+|+|.+--..+--
T Consensus 276 ~d~v~ik~~~~GG 288 (382)
T 1rvk_A 276 CDILRTGVNDVGG 288 (382)
T ss_dssp CSEEEECHHHHTS
T ss_pred CCEEeeCchhcCC
Confidence 9999986555433
No 44
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.39 E-value=1.7e-11 Score=119.03 Aligned_cols=231 Identities=15% Similarity=0.093 Sum_probs=142.8
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhcC--CCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRTT--NGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a~--g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
.+..=...+|.+.++++.|+.+||. ... -..|.-+ .-+.+-|+ |.++++++....
T Consensus 56 ~~~~d~~t~i~G~~~~~Pi~iAPmg-~~~-l~~~~~e--~a~a~aa~~~G~~~~~s~~~~~------------------- 112 (370)
T 1gox_A 56 VTNIDMTTTILGFKISMPIMIAPTA-MQK-MAHPEGE--YATARAASAAGTIMTLSSWATS------------------- 112 (370)
T ss_dssp CSCCBCCEEETTEEESSSEEECCCS-CGG-GTCTTHH--HHHHHHHHHTTCCEEECTTCSS-------------------
T ss_pred CCCCCCceEECCcccCCceeEcccc-hhh-hccchHH--HHHHHHHHHcCCCeeccCCCCC-------------------
Confidence 3444456788999999999999994 211 1122222 22444443 677777753310
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARN 167 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~ 167 (367)
.+++++. ..+.+..+||+-.. .+ +...+.+++
T Consensus 113 -~ieev~~---~~~~~~~~QLy~~~--------------------------------d~------------~~~~~~~~~ 144 (370)
T 1gox_A 113 -SVEEVAS---TGPGIRFFQLYVYK--------------------------------DR------------NVVAQLVRR 144 (370)
T ss_dssp -CHHHHHT---TCCCCEEEEECCBS--------------------------------SH------------HHHHHHHHH
T ss_pred -CHHHHHh---hcCCCceEEEecCC--------------------------------Cc------------hHHHHHHHH
Confidence 1222221 12357788884210 00 223566777
Q ss_pred HHHhCCCEEEEecccchH-------HHhhcCcc----cccCCC-------CCCCch------hhHhHHHHHHHHHHHHHh
Q 017733 168 AIEAGFDGVEIHGANGYL-------IDQFMKDQ----VNDRTD-------EYGGSL------ENRCRFALEVVEAVVREI 223 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyL-------l~qFlsp~----~N~R~D-------~yGgs~------enr~r~~~eii~aiR~~v 223 (367)
+.++|+++|+|+..+... -..|--|. -|...+ .-|..+ +...++..+.|+++|+.+
T Consensus 145 a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~ 224 (370)
T 1gox_A 145 AERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTIT 224 (370)
T ss_dssp HHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHHHHHHHHHHC
T ss_pred HHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHHHHHHHHHHh
Confidence 788999999999998543 11221111 011111 112222 223355678899999998
Q ss_pred CCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCC
Q 017733 224 GAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGG 301 (367)
Q Consensus 224 g~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Gg 301 (367)
+ .+|.+|... +.+ .++.+.++|+|+|.++...-.+....++....+..+++.+ ++|||++||
T Consensus 225 ~-~pv~vK~~~-----------~~e----~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GG 288 (370)
T 1gox_A 225 S-LPILVKGVI-----------TAE----DARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGG 288 (370)
T ss_dssp C-SCEEEECCC-----------SHH----HHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESS
T ss_pred C-CCEEEEecC-----------CHH----HHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECC
Confidence 4 478888764 122 4567788999999995422111222344567788888888 689999999
Q ss_pred C-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 302 Y-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 302 i-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
+ +.+++.++|+.| +|+|++||+++..
T Consensus 289 I~~~~D~~k~l~~G-AdaV~iGr~~l~~ 315 (370)
T 1gox_A 289 VRRGTDVFKALALG-AAGVFIGRPVVFS 315 (370)
T ss_dssp CCSHHHHHHHHHHT-CSEEEECHHHHHH
T ss_pred CCCHHHHHHHHHcC-CCEEeecHHHHHH
Confidence 9 899999999999 9999999999964
No 45
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.38 E-value=1.9e-11 Score=119.35 Aligned_cols=233 Identities=14% Similarity=0.065 Sum_probs=144.6
Q ss_pred CccCCCccccCCeeeCCceeeCcCCCCccCCCCCCHHHHHHHHhhc-C-CCeeEEEccceeCCCCCCCCCCCcCCCHHhh
Q 017733 10 NIPLLTAYKMGQFNLSHRMVLAPLTRIRSYNHIPQPHAILYYSQRT-T-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQV 87 (367)
Q Consensus 10 ~~~Lf~Pl~ig~~~lkNRiv~apm~~~~~~~g~~t~~~~~~y~~~a-~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~ 87 (367)
.+..=...+|.+.++++.|+.+||... . -..|.-+ .. +.+-| + |.++++++....
T Consensus 79 ~~~~d~st~i~G~~l~~Pi~iAPmg~~-~-l~~~~~e-~~-laraA~~~G~~~~~s~~~s~------------------- 135 (392)
T 2nzl_A 79 VAETDLSTSVLGQRVSMPICVGATAMQ-R-MAHVDGE-LA-TVRACQSLGTGMMLSSWATS------------------- 135 (392)
T ss_dssp CTTCBCCEEETTEEESSSEEECCCSCG-G-GTSTTHH-HH-HHHHHHHHTCEEEECTTCSS-------------------
T ss_pred CcCCCcceEECCEecCCceEecccccc-c-cccchHH-HH-HHHHHHHcCCCeeccchHHH-------------------
Confidence 344445578899999999999999321 1 0112222 22 33333 3 777888763311
Q ss_pred hhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 017733 88 EAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARN 167 (367)
Q Consensus 88 ~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~ 167 (367)
.+.++.+. ..+.+.++||+-.. .+ +...+.+++
T Consensus 136 -~le~v~~~--~~~~~~~~QLy~~~--------------------------------d~------------~~~~~~~~r 168 (392)
T 2nzl_A 136 -SIEEVAEA--GPEALRWLQLYIYK--------------------------------DR------------EVTKKLVRQ 168 (392)
T ss_dssp -CHHHHHHH--CTTSEEEEEECCBS--------------------------------SH------------HHHHHHHHH
T ss_pred -HHHHHHHh--cCCCcEEEEEEecC--------------------------------CH------------HHHHHHHHH
Confidence 11222221 13568899994210 00 234667788
Q ss_pred HHHhCCCEEEEecccchH-------HHhhcCc-cc---ccC------CC--C-CCCc----hhh---HhHHHHHHHHHHH
Q 017733 168 AIEAGFDGVEIHGANGYL-------IDQFMKD-QV---NDR------TD--E-YGGS----LEN---RCRFALEVVEAVV 220 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyL-------l~qFlsp-~~---N~R------~D--~-yGgs----~en---r~r~~~eii~aiR 220 (367)
++++||+++.|+.+|... ...|--| .. |.- .. . .+|+ +.. +.++..+.|++||
T Consensus 169 a~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~d~~~~~~~i~~lr 248 (392)
T 2nzl_A 169 AEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLR 248 (392)
T ss_dssp HHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHBCTTCCHHHHHHHC
T ss_pred HHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcCChHHHHHHHHHHH
Confidence 888999999999988542 1222111 11 210 00 0 1222 222 4557788999999
Q ss_pred HHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEE
Q 017733 221 REIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIA 298 (367)
Q Consensus 221 ~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~ 298 (367)
+.++ .||.||... +.+ .++.++++|+|+|.++.....+....++....+..+++.+ ++|||+
T Consensus 249 ~~~~-~PvivKgv~-----------~~e----~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia 312 (392)
T 2nzl_A 249 RLTS-LPIVAKGIL-----------RGD----DAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFL 312 (392)
T ss_dssp --CC-SCEEEEEEC-----------CHH----HHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEE
T ss_pred HhhC-CCEEEEecC-----------CHH----HHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEE
Confidence 9984 488888532 233 4667789999999996543222333445567778888887 489999
Q ss_pred eCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 299 AGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 299 ~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
+||+ +.+++.++|+.| +|+|++||+++...
T Consensus 313 ~GGI~~g~Dv~kalalG-Ad~V~iGr~~l~~~ 343 (392)
T 2nzl_A 313 DGGVRKGTDVLKALALG-AKAVFVGRPIVWGL 343 (392)
T ss_dssp CSSCCSHHHHHHHHHTT-CSEEEECHHHHHHH
T ss_pred ECCCCCHHHHHHHHHhC-CCeeEECHHHHHHH
Confidence 9999 899999999999 99999999999754
No 46
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.36 E-value=1.4e-11 Score=120.34 Aligned_cols=134 Identities=15% Similarity=0.181 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.|+ +.++..++|++||+++| + +|.+..+.
T Consensus 149 e~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g-d~~l~vD~n~--- 199 (384)
T 2pgw_A 149 EELARDAAVGHAQGERVFYLKVGR-------------------------GEKLDLEITAAVRGEIG-DARLRLDANE--- 199 (384)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHHTTST-TCEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEECcCC-------------------------CHHHHHHHHHHHHHHcC-CcEEEEecCC---
Confidence 568999999999999999998753 47889999999999999 6 56655432
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++ . .+.+...++.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 200 ------~~~~~~a~~~~~~l~~~~i~~iE--qP-----~-~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~ 265 (384)
T 2pgw_A 200 ------GWSVHDAINMCRKLEKYDIEFIE--QP-----T-VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAA 265 (384)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSEEE--CC-----S-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEe--CC-----C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 33 1 2335677888999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCCchHHHH
Q 017733 317 DLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 317 D~V~~gR~~ladP~l~~k~ 335 (367)
|+|.+-...+-.+.-..++
T Consensus 266 d~v~ik~~~~GGit~~~~i 284 (384)
T 2pgw_A 266 DMICIGPREIGGIQPMMKA 284 (384)
T ss_dssp SEEEECHHHHTSHHHHHHH
T ss_pred CEEEEcchhhCCHHHHHHH
Confidence 9999999888877544443
No 47
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.35 E-value=1.2e-11 Score=121.06 Aligned_cols=126 Identities=14% Similarity=0.245 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++|+++|++++++||++|+|+.+++ +.++..++|++||+++|++ +|.++.+.
T Consensus 163 ~e~~~~~a~~~~~~Gf~~vKik~g~~------------------------~~~~~~e~v~avR~avg~d~~l~vDan~-- 216 (393)
T 2og9_A 163 IDQLMVNASASIERGIGGIKLKVGQP------------------------DGALDIARVTAVRKHLGDAVPLMVDANQ-- 216 (393)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCCS------------------------CHHHHHHHHHHHHHHHCTTSCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC------------------------CHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 36789999999999999999998641 2678899999999999987 68887653
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 217 -------~~~~~~a~~~~~~l~~~~i~~iE--~P~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 281 (393)
T 2og9_A 217 -------QWDRPTAQRMCRIFEPFNLVWIE--EPL------DAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRA 281 (393)
T ss_dssp -------CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCC
Confidence 33578899999999999999987 331 1235677888999999999999998 8999999999999
Q ss_pred CcEEcccHH
Q 017733 316 TDLVAFGRL 324 (367)
Q Consensus 316 ~D~V~~gR~ 324 (367)
+|+|.+--.
T Consensus 282 ~d~v~ik~~ 290 (393)
T 2og9_A 282 ADYLMPDAP 290 (393)
T ss_dssp CSEECCCHH
T ss_pred CCEEeeCcc
Confidence 999987433
No 48
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.33 E-value=2e-11 Score=118.12 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.||+ + .++..++|++||+++|++ +|.++.+.
T Consensus 146 ~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~--- 198 (359)
T 1mdl_A 146 KLATERAVTAAELGFRAVKTRIGYP--------------------A----LDQDLAVVRSIRQAVGDDFGIMVDYNQ--- 198 (359)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECCC---
Confidence 5688999999999999999998772 1 467899999999999976 67777764
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++ . .+.+...++.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i~~iE--~P-----~-~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~ 264 (359)
T 1mdl_A 199 ------SLDVPAAIKRSQALQQEGVTWIE--EP-----T-LQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGAC 264 (359)
T ss_dssp ------CSCHHHHHHHHHHHHHHTCSCEE--CC-----S-CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCeEE--CC-----C-ChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 33 1 1235677888999999999999998 89999999999999
Q ss_pred cEEcccHHHH
Q 017733 317 DLVAFGRLFL 326 (367)
Q Consensus 317 D~V~~gR~~l 326 (367)
|+|.+-...+
T Consensus 265 d~v~ik~~~~ 274 (359)
T 1mdl_A 265 RLAMPDAMKI 274 (359)
T ss_dssp SEECCBTTTT
T ss_pred CEEeecchhh
Confidence 9999865443
No 49
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=99.32 E-value=3.5e-11 Score=118.43 Aligned_cols=133 Identities=15% Similarity=0.113 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++++++|++++++||++|+|+.++|.+ | || ++++..+++|++||+++|++ +|.|+.|.
T Consensus 181 e~~~~~a~~~~~~Gf~~iKik~g~gp~-------------d--g~---~~~~~die~v~avReavG~d~~L~vDaN~--- 239 (412)
T 3stp_A 181 EAMQKEAEEAMKGGYKAFKSRFGYGPK-------------D--GM---PGMRENLKRVEAVREVIGYDNDLMLECYM--- 239 (412)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECCCCGG-------------G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEecccCcc-------------c--cc---chHHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 678999999999999999999998731 1 22 67889999999999999987 68888765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|.+
T Consensus 240 ------~~~~~~Ai~~~~~Le~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~ 305 (412)
T 3stp_A 240 ------GWNLDYAKRMLPKLAPYEPRWLE--EPV------IADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAV 305 (412)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 34578899999999999999998 331 1235567888999999999999998 89999999999999
Q ss_pred cEEcccHHHH
Q 017733 317 DLVAFGRLFL 326 (367)
Q Consensus 317 D~V~~gR~~l 326 (367)
|+|.+--..+
T Consensus 306 D~v~ik~~~~ 315 (412)
T 3stp_A 306 SVLQYDTNRV 315 (412)
T ss_dssp SEECCCHHHH
T ss_pred CEEecChhhc
Confidence 9998755444
No 50
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.32 E-value=2.5e-11 Score=118.01 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.||+ + .++..++|++||+++|++ +|.++.+.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~G~d~~l~vDan~--- 200 (371)
T 2ovl_A 148 ADLKTQADRFLAGGFRAIKMKVGRP--------------------D----LKEDVDRVSALREHLGDSFPLMVDANM--- 200 (371)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 5678999999999999999999873 1 457799999999999977 68887764
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 201 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 266 (371)
T 2ovl_A 201 ------KWTVDGAIRAARALAPFDLHWIE--EPT------IPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSL 266 (371)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 331 1235667888999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCC
Q 017733 317 DLVAFGRLFLANP 329 (367)
Q Consensus 317 D~V~~gR~~ladP 329 (367)
|+|.+-...+--+
T Consensus 267 d~v~ik~~~~GGi 279 (371)
T 2ovl_A 267 TLPEPDVSNIGGY 279 (371)
T ss_dssp SEECCCTTTTTSH
T ss_pred CEEeeCccccCCH
Confidence 9999876655444
No 51
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=99.32 E-value=1.8e-11 Score=119.90 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCC
Q 017733 156 KIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSP 234 (367)
Q Consensus 156 ~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~ 234 (367)
.++++|+++|++++++||++|+|+.+++|+ |+ | + .++.++.+++|++||+++|++ .|.++.+.
T Consensus 147 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~---~~--------~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~ 210 (392)
T 3p3b_A 147 AAVALMQEEAMQGYAKGQRHFKIKVGRGGR---HM--------P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANN 210 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCHHHH---TS--------C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT
T ss_pred chHHHHHHHHHHHHHhCCCEEEECcCcCcc---cC--------C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578899999999999999999999999885 54 1 3 458899999999999999987 67776654
Q ss_pred CccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh-----cCCcEEEeCCC-CHHHHH
Q 017733 235 YAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA-----FEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggi-t~~~a~ 308 (367)
..+.+++.++++.|++.+++|++ ++ .. .+....+.+++. +++||++.+ + ++++++
T Consensus 211 ---------~~~~~~ai~~~~~l~~~~i~~iE--~P-----~~--~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~ 271 (392)
T 3p3b_A 211 ---------AYNLNLTKEVLAALSDVNLYWLE--EA-----FH--EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLI 271 (392)
T ss_dssp ---------CCCHHHHHHHHHHTTTSCEEEEE--CS-----SS--CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHH
T ss_pred ---------CCCHHHHHHHHHHHHhcCCCEEe--cC-----Cc--ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHH
Confidence 33578899999999999999987 33 12 345667889988 899999999 9 899999
Q ss_pred HHHHcCCCcEEcc
Q 017733 309 KAVAANYTDLVAF 321 (367)
Q Consensus 309 ~~L~~G~~D~V~~ 321 (367)
++++.|.+|+|.+
T Consensus 272 ~~i~~~~~d~v~i 284 (392)
T 3p3b_A 272 EWATRGRVDVLQY 284 (392)
T ss_dssp HHHHTTSCCEECC
T ss_pred HHHHcCCCCEEEe
Confidence 9999999999987
No 52
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.32 E-value=1.8e-10 Score=110.45 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=90.0
Q ss_pred HHHHHHHHhC--CCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 163 LAARNAIEAG--FDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 163 ~aA~~a~~aG--fdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.++.+.++| +|.|+|+.++| ......++|+++|+.++..+|..- +.
T Consensus 109 ~~a~~~~~~g~~~~~i~i~~~~G------------------------~~~~~~~~i~~lr~~~~~~~vi~G-~v------ 157 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITIDIAHG------------------------HSNAVINMIQHIKKHLPESFVIAG-NV------ 157 (336)
T ss_dssp HHHHHHHHTTCCCSEEEEECSSC------------------------CSHHHHHHHHHHHHHCTTSEEEEE-EE------
T ss_pred HHHHHHHhcCCCCCEEEEECCCC------------------------CcHHHHHHHHHHHHhCCCCEEEEC-Cc------
Confidence 4477788899 99999987542 134678999999999953233321 11
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCC--cc-c---cCCchh--hHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPR--MI-Q---LTDKSE--TQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~--~~-~---~~~~~~--~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
.+. +.++.+.++|+|+|.++... .. . .....+ ....+..+++.+++|||++||+ +..++.++|
T Consensus 158 ----~s~----e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kal 229 (336)
T 1ypf_A 158 ----GTP----EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSI 229 (336)
T ss_dssp ----CSH----HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHH
T ss_pred ----CCH----HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH
Confidence 123 36677889999999985321 10 0 011111 3566778888889999999999 899999999
Q ss_pred HcCCCcEEcccHHHHh
Q 017733 312 AANYTDLVAFGRLFLA 327 (367)
Q Consensus 312 ~~G~~D~V~~gR~~la 327 (367)
+.| +|+|++||+++.
T Consensus 230 alG-AdaV~iGr~~l~ 244 (336)
T 1ypf_A 230 RFG-ATMVMIGSLFAG 244 (336)
T ss_dssp HTT-CSEEEESGGGTT
T ss_pred HcC-CCEEEeChhhhc
Confidence 998 999999999995
No 53
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.32 E-value=2e-11 Score=119.45 Aligned_cols=129 Identities=8% Similarity=0.068 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|+ + ..++ .++|++||+++|++ +|.++.+.
T Consensus 166 e~~~~~a~~~~~~Gf~~vKik~g~-----------------------~-~~~~-~e~v~avr~a~g~d~~l~vDan~--- 217 (388)
T 2nql_A 166 KARGELAKYWQDRGFNAFKFATPV-----------------------A-DDGP-AAEIANLRQVLGPQAKIAADMHW--- 217 (388)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGG-----------------------C-TTCH-HHHHHHHHHHHCTTSEEEEECCS---
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCC-----------------------C-ChHH-HHHHHHHHHHhCCCCEEEEECCC---
Confidence 678999999999999999999764 1 2578 99999999999977 68887654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++ . .+.+...++.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 218 ------~~~~~~a~~~~~~l~~~~i~~iE--qP-----~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 283 (388)
T 2nql_A 218 ------NQTPERALELIAEMQPFDPWFAE--AP-----V-WTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRI 283 (388)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSCEE--CC-----S-CTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCC
T ss_pred ------CCCHHHHHHHHHHHhhcCCCEEE--CC-----C-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 33 1 1235677888999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCCc
Q 017733 317 DLVAFGRLFLANPD 330 (367)
Q Consensus 317 D~V~~gR~~ladP~ 330 (367)
|+|.+-... --+.
T Consensus 284 d~v~ik~~~-GGit 296 (388)
T 2nql_A 284 AIVQPEMGH-KGIT 296 (388)
T ss_dssp SEECCCHHH-HCHH
T ss_pred CEEEecCCC-CCHH
Confidence 999997666 5553
No 54
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.31 E-value=2e-11 Score=118.98 Aligned_cols=126 Identities=11% Similarity=0.113 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|| ..++..++|++||+++|++ +|.++.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g~d~~l~vDan~--- 198 (379)
T 2rdx_A 147 AETRAELARHRAAGYRQFQIKVGA-------------------------DWQSDIDRIRACLPLLEPGEKAMADANQ--- 198 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHGGGSCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEeccC-------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 578999999999999999999876 1578899999999999976 68877654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|+ ||+ ++ .. +....+.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i-~iE--~P-----~~---~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~ 261 (379)
T 2rdx_A 199 ------GWRVDNAIRLARATRDLDY-ILE--QP-----CR---SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGA 261 (379)
T ss_dssp ------CSCHHHHHHHHHHTTTSCC-EEE--CC-----SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhCCe-EEe--CC-----cC---CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 3357889999999999999 986 33 11 5677888999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCC
Q 017733 317 DLVAFGRLFLANP 329 (367)
Q Consensus 317 D~V~~gR~~ladP 329 (367)
|+|.+-...+--+
T Consensus 262 d~v~ik~~~~GGi 274 (379)
T 2rdx_A 262 EICCLKISNLGGL 274 (379)
T ss_dssp SEEEEETTTTTSH
T ss_pred CEEEEeccccCCH
Confidence 9999866555444
No 55
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.30 E-value=4.7e-11 Score=116.88 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.++ | + .++..++|++||+++|++ +|.|+.+.
T Consensus 151 ~~~~~~a~~~~~~Gf~~vKik~g~----------------~----~----~~~~~e~v~avR~a~G~d~~l~vDan~--- 203 (391)
T 2qgy_A 151 NDYLRQIEKFYGKKYGGIKIYPML----------------D----S----LSISIQFVEKVREIVGDELPLMLDLAV--- 203 (391)
T ss_dssp HHHHHHHHHHHHTTCSCEEECCCC----------------S----S----HHHHHHHHHHHHHHHCSSSCEEEECCC---
T ss_pred HHHHHHHHHHHHcCCCEEEEccCC----------------C----h----HHHHHHHHHHHHHHhCCCCEEEEEcCC---
Confidence 678999999999999999999763 0 0 478899999999999987 68887764
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 204 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 269 (391)
T 2qgy_A 204 ------PEDLDQTKSFLKEVSSFNPYWIE--EPV------DGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAA 269 (391)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSEEE--CSS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCeEe--CCC------ChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 331 1235677888999999999999998 89999999999999
Q ss_pred cEEcccHHH
Q 017733 317 DLVAFGRLF 325 (367)
Q Consensus 317 D~V~~gR~~ 325 (367)
|+|.+-...
T Consensus 270 d~v~ik~~~ 278 (391)
T 2qgy_A 270 DIFNPDISG 278 (391)
T ss_dssp SEECCBTTT
T ss_pred CEEEECcch
Confidence 999884443
No 56
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.27 E-value=6.8e-11 Score=116.00 Aligned_cols=123 Identities=15% Similarity=0.254 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|+ ++.++..++|++||+++|++ +|.++.+.
T Consensus 177 e~~~~~a~~~~~~Gf~~vKik~g~------------------------~~~~~d~e~v~avR~avG~d~~l~vDan~--- 229 (398)
T 2pp0_A 177 DQVLKNVVISRENGIGGIKLKVGQ------------------------PNCAEDIRRLTAVREALGDEFPLMVDANQ--- 229 (398)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECCC------------------------SCHHHHHHHHHHHHHHHCSSSCEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEecCC------------------------CCHHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 568899999999999999999764 13678899999999999987 68777654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++|+.|.+
T Consensus 230 ------~~~~~~ai~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 295 (398)
T 2pp0_A 230 ------QWDRETAIRMGRKMEQFNLIWIE--EPL------DAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNAS 295 (398)
T ss_dssp ------CSCHHHHHHHHHHHGGGTCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHHcCCceee--CCC------ChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 331 1235667888999999999999998 89999999999999
Q ss_pred cEEccc
Q 017733 317 DLVAFG 322 (367)
Q Consensus 317 D~V~~g 322 (367)
|+|.+-
T Consensus 296 d~v~ik 301 (398)
T 2pp0_A 296 DFVQPD 301 (398)
T ss_dssp SEECCC
T ss_pred CEEEeC
Confidence 999874
No 57
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.24 E-value=4.5e-11 Score=108.24 Aligned_cols=126 Identities=13% Similarity=0.130 Sum_probs=94.5
Q ss_pred HHHHHHHHhCCCEEE--EecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe---CCCcc
Q 017733 163 LAARNAIEAGFDGVE--IHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL---SPYAE 237 (367)
Q Consensus 163 ~aA~~a~~aGfdgVe--i~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl---s~~~~ 237 (367)
..+++|.++|+|+|+ ||.+| .|.++| ..+.+.+++||++++ ++.+|+ ++
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~-------------~~~~~~--------~~~~~~i~~v~~a~~--pv~vKvi~e~~--- 127 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSA-------------FKSEKY--------DFVVEELKEIFRETP--SAVHKVIVETP--- 127 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHH-------------HHTTCH--------HHHHHHHHHHHHTCT--TSEEEEECCGG---
T ss_pred HHHHHHHHcCCCEEEEEecHHH-------------HhcCCh--------HHHHHHHHHHHHHhc--CceEEEEEeCC---
Confidence 345788899999999 45544 334433 245677999999997 567888 43
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
+.+.++...+++.++++|+|+|.++.+.. ........++.+++.+ ++||+++||+ |++++.++|+.|
T Consensus 128 ------~l~~~~~~~~a~~a~eaGad~I~tstg~~----~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aG 197 (225)
T 1mzh_A 128 ------YLNEEEIKKAVEICIEAGADFIKTSTGFA----PRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAG 197 (225)
T ss_dssp ------GCCHHHHHHHHHHHHHHTCSEEECCCSCS----SSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT
T ss_pred ------CCCHHHHHHHHHHHHHhCCCEEEECCCCC----CCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhC
Confidence 12456688899999999999996543321 1223556788888887 6899999999 899999999998
Q ss_pred CCcEEcccHHH
Q 017733 315 YTDLVAFGRLF 325 (367)
Q Consensus 315 ~~D~V~~gR~~ 325 (367)
+|.|+++++.
T Consensus 198 -A~~iG~s~~~ 207 (225)
T 1mzh_A 198 -ADRIGTSSGI 207 (225)
T ss_dssp -CSEEEESCHH
T ss_pred -chHHHHccHH
Confidence 9999888873
No 58
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.24 E-value=9.5e-11 Score=115.06 Aligned_cols=133 Identities=11% Similarity=0.058 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|++ ||. |++++ ++..++|++||+++|++ +|.|+.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~----------spv--------G~~~~---~~~~e~v~avr~a~G~d~~l~vDan~--- 202 (401)
T 2hzg_A 147 QETLERARAARRDGFAAVKFGW----------GPI--------GRGTV---AADADQIMAAREGLGPDGDLMVDVGQ--- 202 (401)
T ss_dssp HHHHHHHHHHHHTTCSEEEEES----------TTT--------TSSCH---HHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEcC----------CCC--------CCCHH---HHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 5689999999999999999985 232 55543 67899999999999977 67877764
Q ss_pred ccccCCCC--hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH-hcCCcEEEeCCC-CHHHHHHHHHc
Q 017733 238 CAEAVDSN--PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR-AFEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 238 ~~~~~~~~--~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~-~~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
.. +.+++.++++.|++.|++||+ ++. .+.+....+.+++ .+++||++.+.+ |+++++++++.
T Consensus 203 ------~~~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~ 268 (401)
T 2hzg_A 203 ------IFGEDVEAAAARLPTLDAAGVLWLE--EPF------DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDY 268 (401)
T ss_dssp ------TTTTCHHHHHTTHHHHHHTTCSEEE--CCS------CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHH
T ss_pred ------CCCCCHHHHHHHHHHHHhcCCCEEE--CCC------CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHC
Confidence 33 567899999999999999987 331 1235667788999 899999999998 89999999999
Q ss_pred CCCcEEcccHHHHhCC
Q 017733 314 NYTDLVAFGRLFLANP 329 (367)
Q Consensus 314 G~~D~V~~gR~~ladP 329 (367)
|.+|+|.+-...+--+
T Consensus 269 ~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 269 GRIGFIQIDCGRIGGL 284 (401)
T ss_dssp SCCSEEEECHHHHTSH
T ss_pred CCCCEEEeCcchhCCH
Confidence 9999999976665554
No 59
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.22 E-value=8.8e-11 Score=112.46 Aligned_cols=129 Identities=21% Similarity=0.260 Sum_probs=90.4
Q ss_pred HhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE-eCCCccccccCCCChHH
Q 017733 170 EAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR-LSPYAECAEAVDSNPEA 248 (367)
Q Consensus 170 ~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr-ls~~~~~~~~~~~~~~~ 248 (367)
.+|+|++++|..++ +.+++ .|+.. .+.+.++|++||+ ++ .||.+| ++. +.+.+
T Consensus 143 ~~~~~a~~i~~n~~---~~~~~----------~~~~~--~~~~~~~i~~vr~-~~-~Pv~vK~v~~---------g~~~e 196 (332)
T 1vcf_A 143 MLEADALAFHVNPL---QEAVQ----------RGDTD--FRGLVERLAELLP-LP-FPVMVKEVGH---------GLSRE 196 (332)
T ss_dssp HHTCSEEEEECCHH---HHHHT----------TSCCC--CTTHHHHHHHHCS-CS-SCEEEECSSS---------CCCHH
T ss_pred hcCCCceeeccchH---HHHhc----------CCCcc--HHHHHHHHHHHHc-CC-CCEEEEecCC---------CCCHH
Confidence 35899999987653 33332 11111 1236889999999 73 589999 432 23344
Q ss_pred HHHHHHHHhhhcCccEEEEecCCc---------cc---------cCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHH
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRM---------IQ---------LTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~---------~~---------~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~ 308 (367)
.++.++++|+|+|.++.... .. .....+....+..+++.+ ++|||++||+ +++++.
T Consensus 197 ----~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~~~d~~ 272 (332)
T 1vcf_A 197 ----AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGGVYTGTDGA 272 (332)
T ss_dssp ----HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESSCCSHHHHH
T ss_pred ----HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECCCCCHHHHH
Confidence 35678899999999954311 11 112233456678888888 7999999999 899999
Q ss_pred HHHHcCCCcEEcccHHHHhCC
Q 017733 309 KAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR~~ladP 329 (367)
++|+.| +|+|++||+++..+
T Consensus 273 kal~~G-Ad~V~igr~~l~~~ 292 (332)
T 1vcf_A 273 KALALG-ADLLAVARPLLRPA 292 (332)
T ss_dssp HHHHHT-CSEEEECGGGHHHH
T ss_pred HHHHhC-CChHhhhHHHHHHH
Confidence 999998 99999999999654
No 60
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.22 E-value=5.4e-10 Score=107.49 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE-eCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR-LSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr-ls~~~~~ 238 (367)
...+.++++.++|+|.|.|+.+||+ .+.+.++|++||+.++..+|.++ +.
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~------------------------~~~~~e~I~~ir~~~~~~~Vi~G~V~----- 150 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH------------------------AKYVGKTLKSLRQLLGSRCIMAGNVA----- 150 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS------------------------SHHHHHHHHHHHHHHTTCEEEEEEEC-----
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC------------------------cHhHHHHHHHHHHhcCCCeEEEcCcC-----
Confidence 4567788899999999999998874 12468899999999864466654 21
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCC--cccc----CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPR--MIQL----TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~--~~~~----~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+.+ .++.+.++|+|+|.++... .... ....+....+..+.+..+ |||+.||| ++.++.++|
T Consensus 151 -------T~e----~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kAL 218 (361)
T 3r2g_A 151 -------TYA----GADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKAL 218 (361)
T ss_dssp -------SHH----HHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHH
T ss_pred -------CHH----HHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHH
Confidence 233 4567788999999985321 1000 011122233333333333 99999999 899999999
Q ss_pred HcCCCcEEcccHHHHhCCchHH
Q 017733 312 AANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~ 333 (367)
+.| +|+|++||+|+...+-+-
T Consensus 219 a~G-Ad~V~iGr~f~~t~Espg 239 (361)
T 3r2g_A 219 AFG-ADFVMIGGMLAGSAPTPG 239 (361)
T ss_dssp HTT-CSEEEESGGGTTBTTSSS
T ss_pred HcC-CCEEEEChHHhCCccCCc
Confidence 999 999999999999876433
No 61
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.22 E-value=1.1e-10 Score=113.84 Aligned_cols=122 Identities=10% Similarity=0.163 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.|+ ++ .++..++|++||+++|++ +|.++.+.
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~d~e~v~avR~a~G~d~~l~vDan~--- 193 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGG--------------------TS----FKEDVRHINALQHTAGSSITMILDANQ--- 193 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSS--------------------SC----HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCC--------------------CC----HHHHHHHHHHHHHhhCCCCEEEEECCC---
Confidence 678899999999999999999876 11 467899999999999977 67777654
Q ss_pred ccccCCCChHHHHHHHHHHhhhc-CccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKF-KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~-Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++. |++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 194 ------~~~~~~a~~~~~~l~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 259 (382)
T 2gdq_A 194 ------SYDAAAAFKWERYFSEWTNIGWLE--EPL------PFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRC 259 (382)
T ss_dssp ------CCCHHHHHTTHHHHTTCSCEEEEE--CCS------CSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred ------CCCHHHHHHHHHHHhhccCCeEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 33578899999999999 999987 331 1235567888999999999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 260 ~d~v~i 265 (382)
T 2gdq_A 260 LDIIQP 265 (382)
T ss_dssp CSEECC
T ss_pred CCEEec
Confidence 999987
No 62
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.21 E-value=1.7e-10 Score=113.15 Aligned_cols=122 Identities=14% Similarity=0.176 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.|+ + .++..++|++||+++|++ +|.++.+.
T Consensus 147 e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~~~e~v~avR~a~g~d~~l~vDan~--- 198 (397)
T 2qde_A 147 EAVAEEALAVLREGFHFVKLKAGG---------------------P----LKADIAMVAEVRRAVGDDVDLFIDING--- 198 (397)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECCS---------------------C----HHHHHHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhhhhheeecccC---------------------C----HHHHHHHHHHHHHhhCCCCEEEEECCC---
Confidence 678899999999999999999763 1 367799999999999977 67776653
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 264 (397)
T 2qde_A 199 ------AWTYDQALTTIRALEKYNLSKIE--QPL------PAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAA 264 (397)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhCCCCEEE--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999987 331 1235667888999999999999998 89999999999999
Q ss_pred cEEccc
Q 017733 317 DLVAFG 322 (367)
Q Consensus 317 D~V~~g 322 (367)
|+|.+-
T Consensus 265 d~v~ik 270 (397)
T 2qde_A 265 DGLMIK 270 (397)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999873
No 63
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.20 E-value=2.4e-10 Score=110.89 Aligned_cols=130 Identities=12% Similarity=0.079 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
++++++|+++++ +||++|+||.||+ + .++..++|++||+++|++ .|.++.+.
T Consensus 144 e~~~~~a~~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 197 (370)
T 1nu5_A 144 ARDIDSALEMIETRRHNRFKVKLGAR--------------------T----PAQDLEHIRSIVKAVGDRASVRVDVNQ-- 197 (370)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGCEEEEECTT--
T ss_pred HHHHHHHHHHHHhCCccEEEEecCCC--------------------C----hHHHHHHHHHHHHhcCCCCEEEEECCC--
Confidence 568889999999 9999999998873 1 346789999999999876 56666553
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++ . .+.+....+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 198 -------~~~~~~a~~~~~~l~~~~i~~iE--qP-----~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~ 262 (370)
T 1nu5_A 198 -------GWDEQTASIWIPRLEEAGVELVE--QP-----V-PRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHA 262 (370)
T ss_dssp -------CCCHHHHHHHHHHHHHHTCCEEE--CC-----S-CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHHhcCcceEe--CC-----C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 33578899999999999999987 33 1 1235667888999999999999998 8999999999999
Q ss_pred CcEEcccHHHHhCC
Q 017733 316 TDLVAFGRLFLANP 329 (367)
Q Consensus 316 ~D~V~~gR~~ladP 329 (367)
+|+|.+--..+--.
T Consensus 263 ~d~v~ik~~~~GGi 276 (370)
T 1nu5_A 263 VDAFSLKLCNMGGI 276 (370)
T ss_dssp CSEEEECHHHHTSH
T ss_pred CCEEEEchhhcCCH
Confidence 99999866555444
No 64
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.19 E-value=7.2e-10 Score=107.95 Aligned_cols=104 Identities=13% Similarity=-0.004 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHH
Q 017733 209 CRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSM 288 (367)
Q Consensus 209 ~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~i 288 (367)
..+..++|++||+.++ .||.+|... +.+ .++.+.++|+|.|.++.....+.....+....+..+
T Consensus 210 p~~~~~~i~~i~~~~~-~Pv~vkgv~-----------t~e----~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v 273 (380)
T 1p4c_A 210 ASFNWEALRWLRDLWP-HKLLVKGLL-----------SAE----DADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQS 273 (380)
T ss_dssp TTCCHHHHHHHHHHCC-SEEEEEEEC-----------CHH----HHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHH
T ss_pred ccccHHHHHHHHHhcC-CCEEEEecC-----------cHH----HHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHH
Confidence 3456799999999984 478877421 233 566778899999999532211222233456678889
Q ss_pred HHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 289 RRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 289 r~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
++.++.|||++||+ +.+++.++|+.| +|+|++||+++...
T Consensus 274 ~~~~~~pVia~GGI~~~~dv~kal~~G-AdaV~iGr~~l~~~ 314 (380)
T 1p4c_A 274 VAKTGKPVLIDSGFRRGSDIVKALALG-AEAVLLGRATLYGL 314 (380)
T ss_dssp HHHHCSCEEECSSCCSHHHHHHHHHTT-CSCEEESHHHHHHH
T ss_pred HHHcCCeEEEECCCCCHHHHHHHHHhC-CcHhhehHHHHHHH
Confidence 99899999999999 899999999998 99999999999764
No 65
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.19 E-value=1.9e-10 Score=111.66 Aligned_cols=129 Identities=12% Similarity=0.231 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|+ ..++..++|++||+++|++ +|.++.+.
T Consensus 143 ~~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g~~~~l~vDan~--- 194 (369)
T 2p8b_A 143 ENMAEEAASMIQKGYQSFKMKVGT-------------------------NVKEDVKRIEAVRERVGNDIAIRVDVNQ--- 194 (369)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCcCEEEEEeCC-------------------------CHHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 467899999999999999999874 1577899999999999976 57666553
Q ss_pred ccccCCCChHHHHH-HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGL-YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~-~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++. ++++.|++.|++|++ ++ . .+.+....+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 195 ------~~~~~~a~~~~~~~l~~~~i~~iE--qP-----~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 260 (369)
T 2p8b_A 195 ------GWKNSANTLTALRSLGHLNIDWIE--QP-----V-IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEA 260 (369)
T ss_dssp ------TTBSHHHHHHHHHTSTTSCCSCEE--CC-----B-CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCcEEE--CC-----C-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 23457788 999999999999987 33 1 1235667888999999999999998 8999999999999
Q ss_pred CcEEcccHHHHhCC
Q 017733 316 TDLVAFGRLFLANP 329 (367)
Q Consensus 316 ~D~V~~gR~~ladP 329 (367)
+|+|.+-...+--.
T Consensus 261 ~d~v~ik~~~~GGi 274 (369)
T 2p8b_A 261 ADKVNIKLMKCGGI 274 (369)
T ss_dssp CSEEEECHHHHTSH
T ss_pred CCEEEeecchhCCH
Confidence 99999876655444
No 66
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=99.19 E-value=1.8e-10 Score=113.98 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+|+.++ ..++..++|++||+++|++ .|.|+.+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~-------------------------~~~~d~e~v~avR~avG~d~~l~vDan~--- 238 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGD-------------------------AARVDIERVRHVRKVLGDEVDILTDANT--- 238 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC-------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 678999999999999999999876 1467899999999999976 57766553
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.++ +||++.+.+ ++++++++++.|.
T Consensus 239 ------~~~~~eai~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 304 (428)
T 3bjs_A 239 ------AYTMADARRVLPVLAEIQAGWLE--EPF------ACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGA 304 (428)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCSCEE--CCS------CTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCC
Confidence 33578899999999999999987 331 1235667888999998 999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 305 ~d~v~i 310 (428)
T 3bjs_A 305 VQVWQP 310 (428)
T ss_dssp EEEECC
T ss_pred CCEEEe
Confidence 999976
No 67
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.19 E-value=5.2e-09 Score=101.52 Aligned_cols=126 Identities=17% Similarity=0.131 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.+.+..+.++|.|.|.+|.++ | ..++++++|+. + .+|++++..
T Consensus 111 ~~~~~~~~~~~g~~~V~~~~g~---------~-------------------~~~~i~~~~~~-g-~~v~~~v~t------ 154 (369)
T 3bw2_A 111 YDAKLAVLLDDPVPVVSFHFGV---------P-------------------DREVIARLRRA-G-TLTLVTATT------ 154 (369)
T ss_dssp HHHHHHHHHHSCCSEEEEESSC---------C-------------------CHHHHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHhcCCCEEEEeCCC---------C-------------------cHHHHHHHHHC-C-CeEEEECCC------
Confidence 3455667778999999998765 1 04577777773 2 356665532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcc---ccC---Cc-----hhhHHHHHHHHHhcCCcEEEeCCC-CHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI---QLT---DK-----SETQRSLLSMRRAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~---~~~---~~-----~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 308 (367)
.+ .++.+++.|+|+|.++.+... ... .. ......++.+++.+++||++.||| +++++.
T Consensus 155 ------~~----~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaaGGI~~~~~~~ 224 (369)
T 3bw2_A 155 ------PE----EARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAAGGIMRGGQIA 224 (369)
T ss_dssp ------HH----HHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEESSCCSHHHHH
T ss_pred ------HH----HHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEECCCCCHHHHH
Confidence 23 345677899999998653221 100 00 122567788988899999999999 999999
Q ss_pred HHHHcCCCcEEcccHHHHhCCchHH
Q 017733 309 KAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
++|+.| +|+|.+||+++++|+++.
T Consensus 225 ~~l~~G-Ad~V~vGs~~~~~~e~~~ 248 (369)
T 3bw2_A 225 AVLAAG-ADAAQLGTAFLATDESGA 248 (369)
T ss_dssp HHHHTT-CSEEEESHHHHTSTTCCC
T ss_pred HHHHcC-CCEEEEChHHhCCcccCc
Confidence 999999 999999999999999854
No 68
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=99.19 E-value=5.1e-10 Score=110.85 Aligned_cols=138 Identities=12% Similarity=0.147 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++.||++|+|+.++.+ . +.+|. ..++..+...++|++||+++|++ .|.++.|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~~---------~----~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~-- 212 (433)
T 3rcy_A 148 DMAAESAADCVARGYTAVKFDPAGPY---------T----LRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG-- 212 (433)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCCC---------B----TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS--
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCc---------c----cccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC--
Confidence 67788889999999999999988732 1 12343 23456788999999999999987 68887764
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|.
T Consensus 213 -------~~t~~~A~~~~~~Le~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~ 277 (433)
T 3rcy_A 213 -------QFTTAGAIRLGQAIEPYSPLWYE--EPV------PPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGA 277 (433)
T ss_dssp -------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHhhhcCCCEEE--CCC------ChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 331 1235667888999999999999998 8999999999999
Q ss_pred CcEEcccHHHH
Q 017733 316 TDLVAFGRLFL 326 (367)
Q Consensus 316 ~D~V~~gR~~l 326 (367)
+|+|.+--..+
T Consensus 278 ~D~v~~d~~~~ 288 (433)
T 3rcy_A 278 AAILQPALGRA 288 (433)
T ss_dssp CSEECCCHHHH
T ss_pred CCEEEeCchhc
Confidence 99998765443
No 69
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.18 E-value=1.5e-10 Score=117.27 Aligned_cols=131 Identities=20% Similarity=0.186 Sum_probs=98.9
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE-eCCCcccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR-LSPYAECA 239 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr-ls~~~~~~ 239 (367)
+.+.|+++.++|+|+|+||++||+. ++..++|+++|+.++..+|.++ +.
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~------------------------~~~~~~i~~i~~~~~~~pvi~~~v~------ 305 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNS------------------------VYQIAMVHYIKQKYPHLQVIGGNVV------ 305 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCS------------------------HHHHHHHHHHHHHCTTCEEEEEEEC------
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcc------------------------hhHHHHHHHHHHhCCCCceEecccc------
Confidence 4567778889999999999998631 5678999999999954466542 21
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEec--CCc-ccc----CC--chhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIE--PRM-IQL----TD--KSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~--~~~-~~~----~~--~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~ 309 (367)
+. +.++.+.++|+|+|.++. +.. ... .+ .......+..+++.+++|||+.||+ ++.++.+
T Consensus 306 ------t~----~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~k 375 (514)
T 1jcn_A 306 ------TA----AQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVK 375 (514)
T ss_dssp ------SH----HHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred ------hH----HHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHH
Confidence 12 356778889999998843 111 110 01 1223455677888889999999999 8999999
Q ss_pred HHHcCCCcEEcccHHHHhCCchH
Q 017733 310 AVAANYTDLVAFGRLFLANPDLP 332 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l~ 332 (367)
+|+.| +|+|++||+++++|+++
T Consensus 376 ala~G-Ad~V~iG~~~l~~~e~~ 397 (514)
T 1jcn_A 376 ALALG-ASTVMMGSLLAATTEAP 397 (514)
T ss_dssp HHHTT-CSEEEESTTTTTSTTSS
T ss_pred HHHcC-CCeeeECHHHHcCCcCC
Confidence 99999 99999999999999764
No 70
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=99.15 E-value=5e-10 Score=109.47 Aligned_cols=123 Identities=15% Similarity=0.158 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++++++|++++++||++|+|+.|+ ++ .++..++|++||+++|++ .|.++.+.
T Consensus 147 ~~~~~~a~~~~~~Gf~~vKik~g~--------------------~~----~~~~~e~v~avR~a~G~~~~l~vDan~--- 199 (389)
T 2oz8_A 147 DAFVSLFSHAASIGYSAFKIKVGH--------------------RD----FDRDLRRLELLKTCVPAGSKVMIDPNE--- 199 (389)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCC--------------------SS----HHHHHHHHHHHHTTSCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCEEEEccCC--------------------CC----HHHHHHHHHHHHHhhCCCCeEEEECCC---
Confidence 568899999999999999999876 12 357799999999999876 67776654
Q ss_pred ccccCCCChHHHHHHHHHHhhh--cCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNK--FKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~--~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G 314 (367)
..+.+++.++++.|++ .+++||+ ++ . .+.+....+.+++.+ ++||++.+.+++++++++|+.|
T Consensus 200 ------~~~~~~a~~~~~~l~~~g~~i~~iE--qP-----~-~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~ 265 (389)
T 2oz8_A 200 ------AWTSKEALTKLVAIREAGHDLLWVE--DP-----I-LRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAH 265 (389)
T ss_dssp ------CBCHHHHHHHHHHHHHTTCCCSEEE--SC-----B-CTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTT
T ss_pred ------CCCHHHHHHHHHHHHhcCCCceEEe--CC-----C-CCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcC
Confidence 2357889999999999 8888886 33 1 123566788899999 9999999888999999999999
Q ss_pred CCcEEccc
Q 017733 315 YTDLVAFG 322 (367)
Q Consensus 315 ~~D~V~~g 322 (367)
.+|+|.+.
T Consensus 266 ~~d~v~ik 273 (389)
T 2oz8_A 266 AADILNVH 273 (389)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999997
No 71
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.15 E-value=4.7e-10 Score=109.23 Aligned_cols=127 Identities=9% Similarity=0.074 Sum_probs=105.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++++++|++++++||++|+|+.||+ ..++..++|++||+++|++ +|.++.+.
T Consensus 147 e~~~~~a~~~~~~Gf~~iKik~g~~------------------------~~~~~~e~v~avr~a~g~~~~l~vDan~--- 199 (378)
T 2qdd_A 147 DQMLGLIAEAAAQGYRTHSAKIGGS------------------------DPAQDIARIEAISAGLPDGHRVTFDVNR--- 199 (378)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS------------------------CHHHHHHHHHHHHHSCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHHhhhheeecCCCC------------------------ChHHHHHHHHHHHHHhCCCCEEEEeCCC---
Confidence 5678899999999999999998873 1567899999999999976 67666653
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|+ .++ |++ ++ .. +....+.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 200 ------~~~~~~a~~~~~~l~-~~i-~iE--qP-----~~---d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~ 261 (378)
T 2qdd_A 200 ------AWTPAIAVEVLNSVR-ARD-WIE--QP-----CQ---TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGAC 261 (378)
T ss_dssp ------CCCHHHHHHHHTSCC-CCC-EEE--CC-----SS---SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHhC-CCc-EEE--cC-----CC---CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC
Confidence 335788999999999 999 886 33 21 5677888999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCCc
Q 017733 317 DLVAFGRLFLANPD 330 (367)
Q Consensus 317 D~V~~gR~~ladP~ 330 (367)
|+|.+-...+--+.
T Consensus 262 d~v~ik~~~~GGi~ 275 (378)
T 2qdd_A 262 EGVKIKPNRVGGLT 275 (378)
T ss_dssp SEEEECHHHHTSHH
T ss_pred CEEEecccccCCHH
Confidence 99999877776664
No 72
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.15 E-value=4.2e-10 Score=110.14 Aligned_cols=123 Identities=16% Similarity=0.254 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++++|++++++||++|+|+.+++ + .++..++|++||+++|++ .|.|+.+.
T Consensus 166 ~~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~~~e~v~avr~a~g~~~~l~vDan~-- 219 (392)
T 1tzz_A 166 LSMLRGEMRGYLDRGYNVVKMKIGGA--------------------P----IEEDRMRIEAVLEEIGKDAQLAVDANG-- 219 (392)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEECSSS--------------------C----HHHHHHHHHHHHHHHTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC--
Confidence 36688999999999999999998861 1 467799999999999976 67776654
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC-
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN- 314 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G- 314 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|
T Consensus 220 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 284 (392)
T 1tzz_A 220 -------RFNLETGIAYAKMLRDYPLFWYE--EVG------DPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGG 284 (392)
T ss_dssp -------CCCHHHHHHHHHHHTTSCCSEEE--CCS------CTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSC
T ss_pred -------CCCHHHHHHHHHHHHHcCCCeec--CCC------ChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999987 331 1235667888999999999999998 899999999999
Q ss_pred ---CCcEEcc
Q 017733 315 ---YTDLVAF 321 (367)
Q Consensus 315 ---~~D~V~~ 321 (367)
.+|+|.+
T Consensus 285 ~~~~~d~v~i 294 (392)
T 1tzz_A 285 MRPDRDWLQF 294 (392)
T ss_dssp CCTTTCEECC
T ss_pred CccCCcEEEE
Confidence 9999987
No 73
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.14 E-value=7.1e-10 Score=110.16 Aligned_cols=121 Identities=12% Similarity=0.206 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|. + .++..++|++||+++|++ +|.|+.+.
T Consensus 200 e~~~~~a~~~~~~Gf~~vKik~g~---------------------~----~~~d~e~v~avR~a~G~d~~l~vDan~--- 251 (441)
T 2hxt_A 200 EKLVRLAKEAVADGFRTIKLKVGA---------------------N----VQDDIRRCRLARAAIGPDIAMAVDANQ--- 251 (441)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS---------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEccCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEECCC---
Confidence 568999999999999999999752 1 577899999999999987 67776653
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+....+.+++.+ ++||++.+.+ ++++++++|+.|.
T Consensus 252 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 317 (441)
T 2hxt_A 252 ------RWDVGPAIDWMRQLAEFDIAWIE--EPT------SPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA 317 (441)
T ss_dssp ------CCCHHHHHHHHHTTGGGCCSCEE--CCS------CTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCeee--CCC------CHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999987 331 123556778899988 5999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 318 ~d~v~i 323 (441)
T 2hxt_A 318 VDLIQI 323 (441)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999976
No 74
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=99.13 E-value=3.7e-10 Score=109.85 Aligned_cols=124 Identities=21% Similarity=0.274 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|++++++||+.|+|+.+|. |++ ++...++|++||+++|++ +|.|+.|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~------------------g~~----~~~d~~~v~avR~a~g~~~~l~vDan~--- 202 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVM------------------GDD----PDTDYAIVKAVREAAGPEMEVQIDLAS--- 202 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTT------------------TSC----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCC------------------CCC----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 4678899999999999999999862 333 467799999999999987 68888775
Q ss_pred ccccCCCCh-HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNP-EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~-~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+ .+++..+++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.
T Consensus 203 ------~~~d~~~A~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~ 268 (374)
T 3sjn_A 203 ------KWHTCGHSAMMAKRLEEFNLNWIE--EPV------LADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSN 268 (374)
T ss_dssp ------TTCSHHHHHHHHHHSGGGCCSEEE--CSS------CTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHC
T ss_pred ------CCCCHHHHHHHHHHhhhcCceEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 334 78899999999999999998 431 1234567888999999999999998 7999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 269 ~d~v~~ 274 (374)
T 3sjn_A 269 ADIVQP 274 (374)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999975
No 75
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.13 E-value=3.9e-10 Score=109.53 Aligned_cols=126 Identities=13% Similarity=0.090 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.|+ ..++..++|++||+++|++ +|.++.+.
T Consensus 148 ~~~~~~a~~~~~~Gf~~iKik~g~-------------------------~~~~~~e~v~avr~a~g~~~~l~vDan~--- 199 (371)
T 2ps2_A 148 EDMRARVAKYRAKGYKGQSVKISG-------------------------EPVTDAKRITAALANQQPDEFFIVDANG--- 199 (371)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS-------------------------CHHHHHHHHHHHTTTCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHhChheEEeecCC-------------------------CHHHHHHHHHHHHHhcCCCCEEEEECCC---
Confidence 568999999999999999999864 1577899999999999976 67776653
Q ss_pred ccccCCCChHHHHHHHHHHh-hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKAL-NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L-~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.| ++.|+ |++ ++ .. +....+.+++.+++||++.+.+ ++++++++|+.|.
T Consensus 200 ------~~~~~~a~~~~~~l~~~~~i-~iE--~P-----~~---~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 262 (371)
T 2ps2_A 200 ------KLSVETALRLLRLLPHGLDF-ALE--AP-----CA---TWRECISLRRKTDIPIIYDELATNEMSIVKILADDA 262 (371)
T ss_dssp ------BCCHHHHHHHHHHSCTTCCC-EEE--CC-----BS---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTC
T ss_pred ------CcCHHHHHHHHHHHHhhcCC-cCc--CC-----cC---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCC
Confidence 23578899999999 99999 887 33 11 5567888999999999999998 8999999999999
Q ss_pred CcEEcccHHHHhCC
Q 017733 316 TDLVAFGRLFLANP 329 (367)
Q Consensus 316 ~D~V~~gR~~ladP 329 (367)
+|+|.+-...+--.
T Consensus 263 ~d~v~ik~~~~GGi 276 (371)
T 2ps2_A 263 AEGIDLKISKAGGL 276 (371)
T ss_dssp CSEEEEEHHHHTSH
T ss_pred CCEEEechhhcCCH
Confidence 99998866555443
No 76
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.13 E-value=1e-09 Score=106.32 Aligned_cols=130 Identities=9% Similarity=0.210 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|++++++||++|+|+.+++ + .+...++|++||+++|++ .|.++.+.
T Consensus 142 ~~~~~~a~~~~~~Gf~~iKik~g~~--------------------~----~~~d~~~v~avr~a~g~~~~l~vDan~--- 194 (366)
T 1tkk_A 142 EEMAADAENYLKQGFQTLKIKVGKD--------------------D----IATDIARIQEIRKRVGSAVKLRLDANQ--- 194 (366)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 5578899999999999999998761 1 567899999999999876 67777654
Q ss_pred ccccCCCChHHHHHHHHHHhhh--cCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNK--FKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~--~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++ .|++||+ ++ . .+.+....+.+++.+++||++.+.+ ++++++++++.+
T Consensus 195 ------~~~~~~a~~~~~~l~~~~~~i~~iE--qP-----~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 260 (366)
T 1tkk_A 195 ------GWRPKEAVTAIRKMEDAGLGIELVE--QP-----V-HKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTR 260 (366)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCCEEEEE--CC-----S-CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHHhhcCCCceEEE--CC-----C-CcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhC
Confidence 2357889999999999 9999987 33 1 1235667888999999999999998 899999999999
Q ss_pred CCcEEcccHHHHhCC
Q 017733 315 YTDLVAFGRLFLANP 329 (367)
Q Consensus 315 ~~D~V~~gR~~ladP 329 (367)
.+|+|.+--..+--.
T Consensus 261 ~~d~v~ik~~~~GGi 275 (366)
T 1tkk_A 261 SADLINIKLMKAGGI 275 (366)
T ss_dssp CCSEEEECHHHHTSH
T ss_pred CCCEEEeehhhhcCH
Confidence 999999866555444
No 77
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.11 E-value=2.9e-10 Score=111.71 Aligned_cols=134 Identities=18% Similarity=0.089 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.+.++.+.++|+|+|+||++||+ .+++.++|+++|+.+|..+|.+.-.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g~------------------------~~~~~e~i~~ir~~~~~~pviv~~v------- 202 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHGH------------------------STRIIELIKKIKTKYPNLDLIAGNI------- 202 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCS------------------------SHHHHHHHHHHHHHCTTCEEEEEEE-------
T ss_pred HHHHHHHHHHCCCCEEEEeCCCCC------------------------hHHHHHHHHHHHHHCCCCeEEEcCC-------
Confidence 355566778899999999887641 2678999999999996446665211
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcc------ccCCchhhHHHHHHHHH---hcCCcEEEeCCC-CHHHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI------QLTDKSETQRSLLSMRR---AFEGTFIAAGGY-SRDEGNKA 310 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~------~~~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 310 (367)
.+. +.++.++++|+|+|.++...-. ......+....+..+++ .+++|||+.||+ +++++.++
T Consensus 203 ----~~~----~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~a 274 (404)
T 1eep_A 203 ----VTK----EAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKA 274 (404)
T ss_dssp ----CSH----HHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHH
T ss_pred ----CcH----HHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHH
Confidence 122 3566778899999998321100 00011123344555555 467999999999 79999999
Q ss_pred HHcCCCcEEcccHHHHhCCchHHH
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k 334 (367)
|+.| +|+|++||+++..|+.+..
T Consensus 275 la~G-Ad~V~iG~~~l~~~e~~~~ 297 (404)
T 1eep_A 275 IAAG-ADSVMIGNLFAGTKESPSE 297 (404)
T ss_dssp HHHT-CSEEEECHHHHTBTTSSSC
T ss_pred HHcC-CCHHhhCHHHhcCCCCCcc
Confidence 9999 9999999999999988633
No 78
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.10 E-value=5.3e-10 Score=112.61 Aligned_cols=137 Identities=20% Similarity=0.160 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+++.+.+..+.++|+|+|+|+.++|+ .+...++|+++|+.++..+|.+.-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~------------------------~~~~~e~i~~i~~~~p~~pvi~g~------ 285 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGH------------------------SRRVIETLEMIKADYPDLPVVAGN------ 285 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCS------------------------SHHHHHHHHHHHHHCTTSCEEEEE------
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCc------------------------hHHHHHHHHHHHHHCCCceEEeCC------
Confidence 34577888899999999999988762 145689999999999645665521
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc------ccCCchhhHHHHHHHH---HhcCCcEEEeCCC-CHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI------QLTDKSETQRSLLSMR---RAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~------~~~~~~~~~~~~~~ir---~~~~~pvi~~Ggi-t~~~a~ 308 (367)
..+.++ ++.+.++|+|+|.++...-. ......+....+..++ +.+++|||+.||+ ++.++.
T Consensus 286 -----~~t~e~----a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~ 356 (494)
T 1vrd_A 286 -----VATPEG----TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIV 356 (494)
T ss_dssp -----ECSHHH----HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHH
T ss_pred -----cCCHHH----HHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHH
Confidence 123443 36677899999998543210 0001112233333343 3368999999999 899999
Q ss_pred HHHHcCCCcEEcccHHHHhCCchHHHH
Q 017733 309 KAVAANYTDLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR~~ladP~l~~k~ 335 (367)
++|+.| +|+|++||+++++|+++.+.
T Consensus 357 kala~G-Ad~V~iGr~~l~~~e~~~~~ 382 (494)
T 1vrd_A 357 KALAAG-AESVMVGSIFAGTEEAPGET 382 (494)
T ss_dssp HHHHTT-CSEEEESHHHHTBTTSSSEE
T ss_pred HHHHcC-CCEEEECHHHhcCCcCCcce
Confidence 999999 99999999999999986553
No 79
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.10 E-value=1.7e-09 Score=103.97 Aligned_cols=136 Identities=14% Similarity=0.096 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|++++++||++|+|+.++ | .+..+++|++||++ |++ .|.+..+.
T Consensus 141 ~~~~~~a~~~~~~Gf~~iKik~g~------------~-------------~~~d~~~v~avr~~-g~~~~l~vDan~--- 191 (345)
T 2zad_A 141 ENRVKEAKKIFEEGFRVIKIKVGE------------N-------------LKEDIEAVEEIAKV-TRGAKYIVDANM--- 191 (345)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS------------C-------------HHHHHHHHHHHHHH-STTCEEEEECTT---
T ss_pred HHHHHHHHHHHHcCcCEEEEeecC------------C-------------HHHHHHHHHHHHhh-CCCCeEEEECCC---
Confidence 567889999999999999999875 1 34558999999999 876 46554432
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCcc--EEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLL--YLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd--~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++.|++ |++ ++ . .+.+....+.+++.+++||++.+.+ ++++++++++.|
T Consensus 192 ------~~~~~~a~~~~~~l~~~~i~~~~iE--~P-----~-~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~ 257 (345)
T 2zad_A 192 ------GYTQKEAVEFARAVYQKGIDIAVYE--QP-----V-RREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE 257 (345)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCCCSEEE--CC-----S-CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHHHHhcCCCeeeee--CC-----C-CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhC
Confidence 33578899999999999999 987 33 1 1235667888999999999999998 899999999999
Q ss_pred CCcEEcc--cHHHHhCCchHHHHHh
Q 017733 315 YTDLVAF--GRLFLANPDLPKRFEL 337 (367)
Q Consensus 315 ~~D~V~~--gR~~ladP~l~~k~~~ 337 (367)
.+|+|.+ +||-+.+.--+.++.+
T Consensus 258 ~~d~v~ik~~~GGit~~~~i~~~A~ 282 (345)
T 2zad_A 258 AVDYVNIKLMKSGISDALAIVEIAE 282 (345)
T ss_dssp CCSEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecccccHHHHHHHHHHHH
Confidence 9999999 7777776654444443
No 80
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.08 E-value=2.1e-09 Score=105.09 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||+.|+|+.++ ..+...++|++||+++|++ +|.|+.|.
T Consensus 153 e~~~~~a~~~~~~G~~~iKiKvG~-------------------------~~~~d~~~v~avR~a~g~d~~l~vDan~--- 204 (389)
T 3ozy_A 153 DQAADELAGWVEQGFTAAKLKVGR-------------------------APRKDAANLRAMRQRVGADVEILVDANQ--- 204 (389)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS-------------------------CHHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEeeccCC-------------------------CHHHHHHHHHHHHHHcCCCceEEEECCC---
Confidence 567888888899999999999765 1345689999999999987 68887765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHH-HhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMR-RAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir-~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.++ +.+++||++.+.+ ++++++++++.|.
T Consensus 205 ------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~ 270 (389)
T 3ozy_A 205 ------SLGRHDALAMLRILDEAGCYWFE--EPL------SIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDA 270 (389)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCSEEE--SCS------CTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTC
T ss_pred ------CcCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 331 123456678899 9999999999998 7999999999999
Q ss_pred CcEEcccHHHH
Q 017733 316 TDLVAFGRLFL 326 (367)
Q Consensus 316 ~D~V~~gR~~l 326 (367)
+|+|.+--..+
T Consensus 271 ~d~v~ik~~~~ 281 (389)
T 3ozy_A 271 IDVLQADASRA 281 (389)
T ss_dssp CSEECCCTTTS
T ss_pred CCEEEeCcccc
Confidence 99998854443
No 81
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.06 E-value=9.8e-09 Score=99.12 Aligned_cols=134 Identities=18% Similarity=0.138 Sum_probs=94.0
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
.+.++.+.++|+|.|.|+.+||. .+.+.+.|+++|+.++ .+|.+.-..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~------------------------~~~~~~~i~~i~~~~~-~~Vivg~v~------- 154 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH------------------------SLNIIRTLKEIKSKMN-IDVIVGNVV------- 154 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS------------------------BHHHHHHHHHHHHHCC-CEEEEEEEC-------
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC------------------------cHHHHHHHHHHHHhcC-CcEEEccCC-------
Confidence 45567778899999999987741 2467889999999983 455542111
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCC--c-cc---cCCchhhHHHHHHH---HHhcCCcEEEeCCC-CHHHHHHHH
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPR--M-IQ---LTDKSETQRSLLSM---RRAFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~--~-~~---~~~~~~~~~~~~~i---r~~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+.+ .++.+.++|+|+|.+.... . .. .....+....+..+ .+.+++|||+.||+ +++++.++|
T Consensus 155 ----t~e----~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal 226 (361)
T 3khj_A 155 ----TEE----ATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL 226 (361)
T ss_dssp ----SHH----HHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH
T ss_pred ----CHH----HHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH
Confidence 233 4567788999999984211 1 00 01112333444444 34468999999999 899999999
Q ss_pred HcCCCcEEcccHHHHhCCchHHHHH
Q 017733 312 AANYTDLVAFGRLFLANPDLPKRFE 336 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~k~~ 336 (367)
+.| +|.|++|+.++..++.+.++.
T Consensus 227 a~G-Ad~V~vGs~~~~t~Esp~~~~ 250 (361)
T 3khj_A 227 AVG-ASSVMIGSILAGTEESPGEKE 250 (361)
T ss_dssp HHT-CSEEEESTTTTTBTTSSCEEE
T ss_pred HcC-CCEEEEChhhhcCCcCCcchh
Confidence 999 999999999999998776543
No 82
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=99.05 E-value=2.6e-09 Score=104.58 Aligned_cols=131 Identities=13% Similarity=0.089 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEE-ecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEE
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEI-HGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGM 230 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei-~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~v 230 (367)
+.+++++++++.|+.+++.||..++| ..+.+ +.+ .+-..++|++||+++|++ +|.|
T Consensus 148 ~~~~~i~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~~~v~avR~a~G~d~~l~v 205 (394)
T 3mqt_A 148 TLSEIVEAYKPLIAKAKERGAKAVKVCIIPND------------------KVS----DKEIVAYLRELREVIGWDMDMMV 205 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCCCT------------------TSC----HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEecccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEEE
Confidence 46777888999999999999999999 45421 011 345689999999999987 6888
Q ss_pred EeCCCccccccCCCC-hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHH
Q 017733 231 RLSPYAECAEAVDSN-PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 231 rls~~~~~~~~~~~~-~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 308 (367)
+.|. .. +.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++
T Consensus 206 Dan~---------~~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 268 (394)
T 3mqt_A 206 DCLY---------RWTDWQKARWTFRQLEDIDLYFIE--ACL------QHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQ 268 (394)
T ss_dssp ECTT---------CCSCHHHHHHHHHHTGGGCCSEEE--SCS------CTTCHHHHHHHHHHSSSEEEECTTCCHHHHHH
T ss_pred ECCC---------CCCCHHHHHHHHHHHhhcCCeEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHH
Confidence 7764 34 578899999999999999998 331 1224567788999999999999998 799999
Q ss_pred HHHHcCCCcEEccc
Q 017733 309 KAVAANYTDLVAFG 322 (367)
Q Consensus 309 ~~L~~G~~D~V~~g 322 (367)
++++.|.+|+|.+-
T Consensus 269 ~~l~~~~~d~v~~k 282 (394)
T 3mqt_A 269 EWLEKTGISVVQSD 282 (394)
T ss_dssp HHHHHHCCSEECCC
T ss_pred HHHHcCCCCeEecC
Confidence 99999999999874
No 83
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=99.03 E-value=3.5e-09 Score=103.96 Aligned_cols=133 Identities=14% Similarity=0.206 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCc--hhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGS--LENRCRFALEVVEAVVREIGAE-RVGMRLSPY 235 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs--~enr~r~~~eii~aiR~~vg~~-~i~vrls~~ 235 (367)
+++++.|+.+++.||..++|+.+..| . .++|. .....+-..++|++||+++|++ .|.|+.|.
T Consensus 153 e~~~~~a~~~~~~G~~~~KlK~g~~~---------~-----~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~- 217 (404)
T 4e5t_A 153 DMAAEAAAKAVDQGFTAVKFDPAGAY---------T-----IYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG- 217 (404)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCC---------B-----TTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS-
T ss_pred HHHHHHHHHHHHcCCCEEeeCCCCCC---------c-----ccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC-
Confidence 56677888888899999999976521 0 11221 1223567899999999999977 68887664
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|
T Consensus 218 --------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 281 (404)
T 4e5t_A 218 --------QFTVSGAKRLARRLEAYDPLWFE--EPI------PPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETG 281 (404)
T ss_dssp --------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHT
T ss_pred --------CcCHHHHHHHHHHHhhcCCcEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 33578899999999999999998 331 1234567888999999999999998 799999999999
Q ss_pred CCcEEccc
Q 017733 315 YTDLVAFG 322 (367)
Q Consensus 315 ~~D~V~~g 322 (367)
.+|+|.+-
T Consensus 282 a~d~v~~d 289 (404)
T 4e5t_A 282 AASILQMN 289 (404)
T ss_dssp CCSEECCC
T ss_pred CCCEEecC
Confidence 99999764
No 84
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.02 E-value=1.8e-09 Score=104.63 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++|+++|++++++||++|+||.+ | ++..++|++||+++|++ .|.+..+.
T Consensus 143 ~~~~~~a~~~~~~Gf~~vKik~~----------~-----------------~~~~e~v~avr~~~g~~~~l~vDan~--- 192 (368)
T 1sjd_A 143 PQLLDVVGGYLDEGYVRIKLKIE----------P-----------------GWDVEPVRAVRERFGDDVLLQVDANT--- 192 (368)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECB----------T-----------------TBSHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCccEEEEecC----------c-----------------hhHHHHHHHHHHhcCCCceEEEeccC---
Confidence 56788999999999999999862 1 33489999999999976 45554432
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.++ .++++.|++.|++|++ ++ . .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 193 ------~~~~~~-~~~~~~l~~~~i~~iE--~P-----~-~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 257 (368)
T 1sjd_A 193 ------AYTLGD-APQLARLDPFGLLLIE--QP-----L-EEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAV 257 (368)
T ss_dssp ------CCCGGG-HHHHHTTGGGCCSEEE--CC-----S-CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHH-HHHHHHHHhcCCCeEe--CC-----C-ChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCC
Confidence 234566 8899999999999987 33 1 1235667888999999999999998 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 258 d~v~i 262 (368)
T 1sjd_A 258 QIVNI 262 (368)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 99987
No 85
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=99.02 E-value=6.1e-09 Score=101.90 Aligned_cols=131 Identities=7% Similarity=0.023 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEE-ecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEE
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEI-HGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGM 230 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei-~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~v 230 (367)
+.+++++++++.|+.+++.||..++| ..+.+ ..+ .+-..++|++||+++|++ +|.|
T Consensus 153 ~~~~~~~~~~~~a~~~~~~G~~~~K~~k~g~~------------------~~~----~~~d~e~v~avR~a~G~d~~l~v 210 (394)
T 3mkc_A 153 SLDVAIKGYAPLLEKAKAHNIRAVKVCVPIKA------------------DWS----TKEVAYYLRELRGILGHDTDMMV 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEECCTTC------------------CCC----HHHHHHHHHHHHHHHCSSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHcCCCEEEeCccCCC------------------ccC----HHHHHHHHHHHHHHhCCCCeEEE
Confidence 46777888899999999999999999 44421 011 344689999999999987 6888
Q ss_pred EeCCCccccccCCCC-hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHH
Q 017733 231 RLSPYAECAEAVDSN-PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 231 rls~~~~~~~~~~~~-~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 308 (367)
+.|. .. +.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++
T Consensus 211 DaN~---------~~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 273 (394)
T 3mkc_A 211 DYLY---------RFTDWYEVARLLNSIEDLELYFAE--ATL------QHDDLSGHAKLVENTRSRICGAEMSTTRFEAE 273 (394)
T ss_dssp ECTT---------CCCCHHHHHHHHHHTGGGCCSEEE--SCS------CTTCHHHHHHHHHHCSSCBEECTTCCHHHHHH
T ss_pred eCCC---------CCCCHHHHHHHHHHhhhcCCeEEE--CCC------CchhHHHHHHHHhhCCCCEEeCCCCCCHHHHH
Confidence 7764 34 578899999999999999998 331 1234567788999999999999998 799999
Q ss_pred HHHHcCCCcEEccc
Q 017733 309 KAVAANYTDLVAFG 322 (367)
Q Consensus 309 ~~L~~G~~D~V~~g 322 (367)
++++.|.+|+|.+-
T Consensus 274 ~~l~~~~~d~v~~k 287 (394)
T 3mkc_A 274 EWITKGKVHLLQSD 287 (394)
T ss_dssp HHHHTTCCSEECCC
T ss_pred HHHHcCCCCeEecC
Confidence 99999999999873
No 86
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=99.02 E-value=5.6e-09 Score=102.75 Aligned_cols=134 Identities=15% Similarity=0.176 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCch-hhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSL-ENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~-enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++.||..++|+.+..|- ...|... ....+...++|++||+++|++ .|.|+.|.
T Consensus 146 e~~~~~a~~~~~~G~~~iKlK~g~~~~-------------~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~-- 210 (412)
T 4e4u_A 146 DLAAECAAENVKLGFTAVKFDPAGPYT-------------AYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG-- 210 (412)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCSCCCB-------------TTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS--
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCc-------------cccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 567788888889999999999765210 0111111 123567899999999999987 68887764
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|.
T Consensus 211 -------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 275 (412)
T 4e4u_A 211 -------QMVPSSAIRLAKRLEKYDPLWFE--EPV------PPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGG 275 (412)
T ss_dssp -------CBCHHHHHHHHHHHGGGCCSEEE--CCS------CSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHhhhcCCcEEE--CCC------ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCC
Confidence 33578899999999999999998 331 1224567888999999999999998 7999999999999
Q ss_pred CcEEccc
Q 017733 316 TDLVAFG 322 (367)
Q Consensus 316 ~D~V~~g 322 (367)
+|+|.+-
T Consensus 276 ~d~v~~d 282 (412)
T 4e4u_A 276 ASILQLN 282 (412)
T ss_dssp CSEECCC
T ss_pred CCEEEeC
Confidence 9999873
No 87
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=99.02 E-value=4.5e-09 Score=103.83 Aligned_cols=148 Identities=14% Similarity=0.211 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC--------chhhHhHHHHHHHHHHHHHhCCc-ceE
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG--------SLENRCRFALEVVEAVVREIGAE-RVG 229 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg--------s~enr~r~~~eii~aiR~~vg~~-~i~ 229 (367)
+++++.|+.+++.||..++|..+.+.+...+-.+..+...+...+ ......+...++|++||+++|++ +|.
T Consensus 151 e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~l~ 230 (424)
T 3v3w_A 151 DSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIHLL 230 (424)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCcEE
Confidence 567788888889999999999875210000000000000000000 01123567899999999999987 688
Q ss_pred EEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHH
Q 017733 230 MRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 230 vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 308 (367)
|+.|. ..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++
T Consensus 231 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 293 (424)
T 3v3w_A 231 HDVHH---------RLTPIEAARLGKALEPYHLFWME--DAV------PAENQESFKLIRQHTTTPLAVGEVFNSIHDCR 293 (424)
T ss_dssp EECTT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CCSSTTHHHHHHHHCCSCEEECTTCCSGGGTH
T ss_pred EeCCC---------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChHhHHHHHHHHhhCCCCEEEccCcCCHHHHH
Confidence 88765 34578899999999999999998 332 1123456788999999999999998 899999
Q ss_pred HHHHcCCCcEEcccH
Q 017733 309 KAVAANYTDLVAFGR 323 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR 323 (367)
++++.|.+|+|.+--
T Consensus 294 ~~i~~ga~d~v~~k~ 308 (424)
T 3v3w_A 294 ELIQNQWIDYIRTTI 308 (424)
T ss_dssp HHHHTTCCSEECCCT
T ss_pred HHHHcCCCCeEeecc
Confidence 999999999998743
No 88
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=99.01 E-value=6.2e-09 Score=102.12 Aligned_cols=149 Identities=9% Similarity=0.047 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..++|+.|..-.-.. ..|..+.......=+...-.+...++|++||+++|++ +|.|+.|.
T Consensus 135 e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~--- 210 (401)
T 3sbf_A 135 EGIYDLVEGFLEKGYKHIRCQLGFYGGVPT-DLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE--- 210 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCCCSCGG-GSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCcccc-cccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC---
Confidence 567778888889999999999875100000 0000000001000012234678899999999999987 68888775
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|.+
T Consensus 211 ------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 276 (401)
T 3sbf_A 211 ------RLFPNQAIQFAKEVEQYKPYFIE--DIL------PPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANRRI 276 (401)
T ss_dssp ------CSCHHHHHHHHHHHGGGCCSCEE--CSS------CTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcCCC
Confidence 33578899999999999999998 432 1223456788999999999999998 89999999999999
Q ss_pred cEEcccHHH
Q 017733 317 DLVAFGRLF 325 (367)
Q Consensus 317 D~V~~gR~~ 325 (367)
|+|.+--..
T Consensus 277 d~v~~k~~~ 285 (401)
T 3sbf_A 277 DFIRCHVSQ 285 (401)
T ss_dssp SEECCCGGG
T ss_pred CEEecCccc
Confidence 999875433
No 89
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=99.01 E-value=7.8e-09 Score=101.66 Aligned_cols=134 Identities=15% Similarity=0.137 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCC--C------Cc---hhhHhHHHHHHHHHHHHHhCCc-
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEY--G------GS---LENRCRFALEVVEAVVREIGAE- 226 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~y--G------gs---~enr~r~~~eii~aiR~~vg~~- 226 (367)
+++++.|+.+++.||..++|..+.. - ..+...| | .. -....++.+++|++||+++|++
T Consensus 145 e~~~~~a~~~~~~Gf~~iKlKv~~~------~----~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~ 214 (409)
T 3go2_A 145 DGVKRTAEEARERQFRAIKTNIFIH------D----DGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDV 214 (409)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCEEC------S----SSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEccccc------c----cccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCC
Confidence 4567777888899999999987310 0 0000011 1 00 0234789999999999999987
Q ss_pred ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHH
Q 017733 227 RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRD 305 (367)
Q Consensus 227 ~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~ 305 (367)
+|.|+.|. ..+.+++.++++.|++.|++||+. +. .+...++.|++.+++||++.+.+ +++
T Consensus 215 ~l~vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE~--P~--------~d~~~~~~l~~~~~iPIa~dE~~~~~~ 275 (409)
T 3go2_A 215 EILLDLNF---------NAKPEGYLKILRELADFDLFWVEI--DS--------YSPQGLAYVRNHSPHPISSCETLFGIR 275 (409)
T ss_dssp EEEEECTT---------CSCHHHHHHHHHHTTTSCCSEEEC--CC--------SCHHHHHHHHHTCSSCEEECTTCCHHH
T ss_pred EEEEECCC---------CCCHHHHHHHHHHHhhcCCeEEEe--Cc--------CCHHHHHHHHhhCCCCEEeCCCcCCHH
Confidence 68888765 345788999999999999999993 21 24566888999999999999998 799
Q ss_pred HHHHHHHcCCCcEEcc
Q 017733 306 EGNKAVAANYTDLVAF 321 (367)
Q Consensus 306 ~a~~~L~~G~~D~V~~ 321 (367)
+++++++.|.+|+|.+
T Consensus 276 ~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 276 EFKPFFDANAVDVAIV 291 (409)
T ss_dssp HHHHHHHTTCCSEEEE
T ss_pred HHHHHHHhCCCCEEEe
Confidence 9999999999999865
No 90
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.00 E-value=4.2e-08 Score=93.56 Aligned_cols=132 Identities=18% Similarity=0.174 Sum_probs=95.7
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
|.+.++.+.++|.|+|.+|.++ | .++++.+|+. | .++...++.
T Consensus 85 ~~~~~~~~~~~g~d~V~~~~g~---------p--------------------~~~~~~l~~~-g-i~vi~~v~t------ 127 (328)
T 2gjl_A 85 YAEYRAAIIEAGIRVVETAGND---------P--------------------GEHIAEFRRH-G-VKVIHKCTA------ 127 (328)
T ss_dssp HHHHHHHHHHTTCCEEEEEESC---------C--------------------HHHHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHhcCCCEEEEcCCC---------c--------------------HHHHHHHHHc-C-CCEEeeCCC------
Confidence 3556677788999999998654 1 3566777775 3 244443321
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc-CC-chhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-TD-KSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-~~-~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
.+ .++.+.+.|+|+|.+........ .. .......+..+++.+++||++.||+ +++++.++++.| +|
T Consensus 128 ------~~----~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~~G-Ad 196 (328)
T 2gjl_A 128 ------VR----HALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALG-AD 196 (328)
T ss_dssp ------HH----HHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CS
T ss_pred ------HH----HHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CC
Confidence 23 34456788999998865432211 11 1234567788888889999999999 899999999998 99
Q ss_pred EEcccHHHHhCCc------hHHHHHhCCC
Q 017733 318 LVAFGRLFLANPD------LPKRFELNAP 340 (367)
Q Consensus 318 ~V~~gR~~ladP~------l~~k~~~g~~ 340 (367)
.|.+||+++..|+ +.+++.++..
T Consensus 197 gV~vGs~~~~~~e~~~~~~~k~~~~~~~~ 225 (328)
T 2gjl_A 197 AINMGTRFLATRECPIHPAVKAAIRAADE 225 (328)
T ss_dssp EEEESHHHHTSSSSCSCHHHHHHHHHCCT
T ss_pred EEEECHHHHcCccccccHHHHHHHHhccc
Confidence 9999999999999 8888877643
No 91
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=99.00 E-value=4.3e-09 Score=102.90 Aligned_cols=121 Identities=12% Similarity=0.061 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+++++.||+.++|+.++. .+-..++|++||+++|++ .|.|+.|.
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDaN~--- 208 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFD-------------------------DARDVRNALHVRELLGAATPLMADANQ--- 208 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSC-------------------------HHHHHHHHHHHHHHHCSSSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-------------------------HHHHHHHHHHHHHhcCCCceEEEeCCC---
Confidence 4678889999999999999998641 234589999999999987 68888765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhh-HHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSET-QRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~-~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.|++||+ ++. .+.+ ...++.|++.+++||++.+.+ ++++++++++.|.
T Consensus 209 ------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 274 (392)
T 3ddm_A 209 ------GWDLPRARQMAQRLGPAQLDWLE--EPL------RADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARS 274 (392)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTC
T ss_pred ------CCCHHHHHHHHHHHHHhCCCEEE--CCC------CccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 33578899999999999999998 331 1223 567788999999999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 275 ~d~v~~ 280 (392)
T 3ddm_A 275 LRVMQP 280 (392)
T ss_dssp EEEECC
T ss_pred CCEEEe
Confidence 999987
No 92
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=98.99 E-value=3.9e-08 Score=93.75 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=88.0
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.+.+..+.++|.|.|.+|+++ | .++++.+|+. + .++.+.++.
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~---------p--------------------~~~~~~l~~~-g-~~v~~~v~s------ 133 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGN---------P--------------------TKYIRELKEN-G-TKVIPVVAS------ 133 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSC---------C--------------------HHHHHHHHHT-T-CEEEEEESS------
T ss_pred HHHHHHHHHHCCCCEEEECCCC---------c--------------------HHHHHHHHHc-C-CcEEEEcCC------
Confidence 3556667788999999998754 1 2355666663 2 245554432
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
.+ .++.+.+.|+|+|-++........+.......+..+++.+++||++.||+ +++++.++++.| +|.|
T Consensus 134 ------~~----~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~G-A~gV 202 (326)
T 3bo9_A 134 ------DS----LARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAFALG-AEAV 202 (326)
T ss_dssp ------HH----HHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEE
T ss_pred ------HH----HHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhC-CCEE
Confidence 23 34556788999998876433221122235567788888889999999999 699999999998 9999
Q ss_pred cccHHHHhCCc
Q 017733 320 AFGRLFLANPD 330 (367)
Q Consensus 320 ~~gR~~ladP~ 330 (367)
.+|++++..++
T Consensus 203 ~vGs~~~~~~e 213 (326)
T 3bo9_A 203 QMGTRFVASVE 213 (326)
T ss_dssp EESHHHHTBSS
T ss_pred EechHHHcCcc
Confidence 99999998876
No 93
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.99 E-value=3.7e-09 Score=104.43 Aligned_cols=148 Identities=10% Similarity=0.088 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCC----CC----chhhHhHHHHHHHHHHHHHhCCc-ceE
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEY----GG----SLENRCRFALEVVEAVVREIGAE-RVG 229 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~y----Gg----s~enr~r~~~eii~aiR~~vg~~-~i~ 229 (367)
+++++.|+.+++.||.+++|..+...+...+-.+..+...+.- -+ +.....+..+++|++||+++|++ +|.
T Consensus 152 e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d~~l~ 231 (425)
T 3vcn_A 152 EDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWDVHLL 231 (425)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEE
Confidence 5677888888899999999998742100000000000000000 00 01112456799999999999987 688
Q ss_pred EEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHH
Q 017733 230 MRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGN 308 (367)
Q Consensus 230 vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~ 308 (367)
|+.|. ..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++
T Consensus 232 vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 294 (425)
T 3vcn_A 232 HDVHH---------RLTPIEAARLGKDLEPYRLFWLE--DSV------PAENQAGFRLIRQHTTTPLAVGEIFAHVWDAK 294 (425)
T ss_dssp EECTT---------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CCSSTTHHHHHHHHCCSCEEECTTCCSGGGTH
T ss_pred EECCC---------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHH
Confidence 87764 34578899999999999999998 332 1123456788999999999999998 899999
Q ss_pred HHHHcCCCcEEcccH
Q 017733 309 KAVAANYTDLVAFGR 323 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR 323 (367)
++++.|.+|+|.+--
T Consensus 295 ~~i~~~a~d~v~~k~ 309 (425)
T 3vcn_A 295 QLIEEQLIDYLRATV 309 (425)
T ss_dssp HHHHTTCCSEECCCT
T ss_pred HHHHcCCCCeEecCh
Confidence 999999999998743
No 94
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.98 E-value=5.3e-09 Score=103.09 Aligned_cols=146 Identities=10% Similarity=0.129 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCccccc-CCCC-CCC-------chhhHhHHHHHHHHHHHHHhCCc-ce
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVND-RTDE-YGG-------SLENRCRFALEVVEAVVREIGAE-RV 228 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~-R~D~-yGg-------s~enr~r~~~eii~aiR~~vg~~-~i 228 (367)
+++++.|+.+++.||.+++|+.+.......|-.+ .++ ..+. -|+ ......+...++|++||+++|++ +|
T Consensus 145 e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~l 223 (418)
T 3r4e_A 145 AETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVG-RGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHHL 223 (418)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCTTC-------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCcccccccccc-ccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCeE
Confidence 5677888888899999999998752100000000 000 0000 000 11223566799999999999987 68
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHH
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEG 307 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a 307 (367)
.|+.|. ..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ +++++
T Consensus 224 ~vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 286 (418)
T 3r4e_A 224 LHDGHH---------RYTPQEAANLGKMLEPYQLFWLE--DCT------PAENQEAFRLVRQHTVTPLAVGEIFNTIWDA 286 (418)
T ss_dssp EEECTT---------CSCHHHHHHHHHHHGGGCCSEEE--SCS------CCSSGGGGHHHHHHCCSCEEECTTCCSGGGT
T ss_pred EEeCCC---------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CccCHHHHHHHHhcCCCCEEEcCCcCCHHHH
Confidence 887764 33578899999999999999998 432 1123455778999999999999998 89999
Q ss_pred HHHHHcCCCcEEccc
Q 017733 308 NKAVAANYTDLVAFG 322 (367)
Q Consensus 308 ~~~L~~G~~D~V~~g 322 (367)
+++++.|.+|+|.+-
T Consensus 287 ~~~l~~~a~d~v~~k 301 (418)
T 3r4e_A 287 KDLIQNQLIDYIRAT 301 (418)
T ss_dssp HHHHHTTCCSEECCC
T ss_pred HHHHHcCCCCeEecC
Confidence 999999999999874
No 95
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.98 E-value=7.3e-09 Score=102.22 Aligned_cols=146 Identities=10% Similarity=0.046 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC---chhhHhHHHHHHHHHHHHHhCCc-ceEEEeCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG---SLENRCRFALEVVEAVVREIGAE-RVGMRLSP 234 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg---s~enr~r~~~eii~aiR~~vg~~-~i~vrls~ 234 (367)
+++++.|+.+++.||..|+|..|..-.-..- .|..| .. ..| +.....+..+++|++||+++|++ .|.|+.|.
T Consensus 156 e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~-~~~~~-~~--~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~ 231 (422)
T 3tji_A 156 EALFASVDALIAQGYRHIRCQLGFYGGTPSA-LHAPD-NP--TPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE 231 (422)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCCCBCGGG-SCCCS-SC--CSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCccccc-ccccc-cc--cccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 5677888888899999999998741000000 00000 00 011 12334788899999999999987 68888775
Q ss_pred CccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc
Q 017733 235 YAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
..+.+++..+++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.
T Consensus 232 ---------~~~~~~A~~~~~~Le~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ 294 (422)
T 3tji_A 232 ---------RLFPQQAVQLAKQLEPFQPYFIE--DIL------PPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVN 294 (422)
T ss_dssp ---------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHT
T ss_pred ---------CCCHHHHHHHHHHHHhhCCCeEE--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc
Confidence 33578899999999999999998 332 1224456788999999999999998 89999999999
Q ss_pred CCCcEEcccHHH
Q 017733 314 NYTDLVAFGRLF 325 (367)
Q Consensus 314 G~~D~V~~gR~~ 325 (367)
|.+|+|.+--..
T Consensus 295 ga~d~v~~k~~~ 306 (422)
T 3tji_A 295 RRIDFIRCHVSQ 306 (422)
T ss_dssp TCCSEECCCGGG
T ss_pred CCCCEEecCccc
Confidence 999999874433
No 96
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.95 E-value=1.3e-08 Score=98.09 Aligned_cols=129 Identities=15% Similarity=0.225 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+.+.||..++|+.|+. .+--.++|++||+++|++ .|.|+.|.
T Consensus 141 ~~~~~~a~~~~~~G~~~~K~K~g~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDan~--- 192 (354)
T 3jva_A 141 NVMAQKAVEKVKLGFDTLKIKVGTG-------------------------IEADIARVKAIREAVGFDIKLRLDANQ--- 192 (354)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCCC-------------------------HHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 4567778888899999999997651 133589999999999987 68888765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.+.+
T Consensus 193 ------~~~~~~a~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~ 258 (354)
T 3jva_A 193 ------AWTPKDAVKAIQALADYQIELVE--QPV------KRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTV 258 (354)
T ss_dssp ------CSCHHHHHHHHHHTTTSCEEEEE--CCS------CTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999998 331 1224566788999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCC
Q 017733 317 DLVAFGRLFLANP 329 (367)
Q Consensus 317 D~V~~gR~~ladP 329 (367)
|+|.+--..+--.
T Consensus 259 d~v~~k~~~~GGi 271 (354)
T 3jva_A 259 DVINIKLMKCGGI 271 (354)
T ss_dssp SEEEECHHHHTSH
T ss_pred CEEEECchhcCCH
Confidence 9998866554433
No 97
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.95 E-value=1.1e-08 Score=100.32 Aligned_cols=130 Identities=15% Similarity=0.218 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++.||..|+| .|.. ..+. ......+-..++|++||+++|++ +|.|+.|.
T Consensus 127 e~~~~~a~~~~~~G~~~iKl-~G~~----------------~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 187 (405)
T 3rr1_A 127 ADVIAGMKALQAGGFDHFKL-NGCE----------------EMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG-- 187 (405)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ESCC----------------SSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS--
T ss_pred HHHHHHHHHHHHcCCCEEEE-ecCC----------------cccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC--
Confidence 56778888888999999999 4331 0000 12234566799999999999987 68887764
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++|+.|.
T Consensus 188 -------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a 252 (405)
T 3rr1_A 188 -------RVSAPMAKVLIKELEPYRPLFIE--EPV------LAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGG 252 (405)
T ss_dssp -------CBCHHHHHHHHHHHGGGCCSCEE--CSS------CCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhC
Confidence 33578899999999999999998 432 1224567888999999999999998 8999999999999
Q ss_pred CcEEccc
Q 017733 316 TDLVAFG 322 (367)
Q Consensus 316 ~D~V~~g 322 (367)
+|+|.+-
T Consensus 253 ~d~v~~d 259 (405)
T 3rr1_A 253 VSILQPD 259 (405)
T ss_dssp CSEECCB
T ss_pred CCeEEEC
Confidence 9999873
No 98
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.94 E-value=1.1e-08 Score=99.50 Aligned_cols=132 Identities=8% Similarity=0.093 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+.+.||+.|+|+.++. ..-..++|++||+++|++ +|.|+.|.
T Consensus 147 e~~~~~a~~~~~~G~~~iKiK~G~~-------------------------~~~d~~~v~avR~a~g~~~~l~vDan~--- 198 (378)
T 3eez_A 147 EETRAVIDRYRQRGYVAHSVKIGGD-------------------------VERDIARIRDVEDIREPGEIVLYDVNR--- 198 (378)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSC-------------------------HHHHHHHHHHHTTSCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHhCCCCEEEeccCCC-------------------------HHHHHHHHHHHHHHcCCCceEEEECCC---
Confidence 4677788888899999999998651 234588999999999987 68887765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.++ ||+ ++ .. ....++.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 199 ------~~~~~~a~~~~~~l~~~~i-~iE--qP-----~~---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~ 261 (378)
T 3eez_A 199 ------GWTRQQALRVMRATEDLHV-MFE--QP-----GE---TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLA 261 (378)
T ss_dssp ------CCCHHHHHHHHHHTGGGTC-CEE--CC-----SS---SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHHhccCCe-EEe--cC-----CC---CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCC
Confidence 3357789999999999999 987 33 11 4566788999999999999998 89999999999999
Q ss_pred cEEcccHHHHhCCchHHHH
Q 017733 317 DLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 317 D~V~~gR~~ladP~l~~k~ 335 (367)
|+|.+-...+--+.-..|+
T Consensus 262 d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 262 EVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp SEEEEEHHHHTSHHHHHHH
T ss_pred CEEEeCchhcCCHHHHHHH
Confidence 9999988887766544443
No 99
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.92 E-value=8.2e-09 Score=101.96 Aligned_cols=145 Identities=12% Similarity=0.149 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHh---------hcCcccccCCC-CCCCchhhHhHHHHHHHHHHHHHhCCc-ce
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQ---------FMKDQVNDRTD-EYGGSLENRCRFALEVVEAVVREIGAE-RV 228 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~q---------Flsp~~N~R~D-~yGgs~enr~r~~~eii~aiR~~vg~~-~i 228 (367)
+..+.++.+++.||..|+|..+..-+-.. -..|....+.+ +-+=+.+...++..++|++||+++|++ +|
T Consensus 152 ~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~avR~a~G~d~~L 231 (426)
T 4e4f_A 152 EVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFEAVRDKFGFNEHL 231 (426)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEE
Confidence 34455566678999999999765211000 00111111100 001123456789999999999999987 68
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHH
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEG 307 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a 307 (367)
.++.|. ..+.+++.++++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ +++++
T Consensus 232 ~vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~ 294 (426)
T 4e4f_A 232 LHDMHH---------RLTPIEAARFGKSVEDYRLFWME--DPT------PAENQACFRLIRQHTVTPIAVGEVFNSIWDC 294 (426)
T ss_dssp EEECTT---------CSCHHHHHHHHHHTGGGCCSEEE--CCS------CCSSGGGGHHHHTTCCSCEEECTTCCSGGGT
T ss_pred EEECCC---------CCCHHHHHHHHHHHhhcCCCEEE--CCC------ChHHHHHHHHHHhcCCCCEEeCCCcCCHHHH
Confidence 887764 34678899999999999999998 432 1223455678999999999999998 89999
Q ss_pred HHHHHcCCCcEEcc
Q 017733 308 NKAVAANYTDLVAF 321 (367)
Q Consensus 308 ~~~L~~G~~D~V~~ 321 (367)
+++++.|.+|+|.+
T Consensus 295 ~~~i~~ga~d~v~~ 308 (426)
T 4e4f_A 295 KQLIEEQLIDYIRT 308 (426)
T ss_dssp HHHHHTTCCSEECC
T ss_pred HHHHHcCCCCEEEe
Confidence 99999999999976
No 100
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.92 E-value=2.2e-08 Score=97.96 Aligned_cols=128 Identities=12% Similarity=0.112 Sum_probs=100.9
Q ss_pred HHHHHHH-HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAA-RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA-~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.| +.+++.||..++|+.+... .. . ....+-..++|++||+++|++ .|.|+.|.
T Consensus 141 e~~~~~a~~~~~~~G~~~~KlKvG~~~-----------~~----~---~~~~~~d~~~v~avR~a~g~~~~l~vDaN~-- 200 (393)
T 4dwd_A 141 DEVVREVARRVEAEQPAAVKIRWDGDR-----------TR----C---DVDIPGDIAKARAVRELLGPDAVIGFDANN-- 200 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCCCT-----------TC----C---SCCHHHHHHHHHHHHHHHCTTCCEEEECTT--
T ss_pred HHHHHHHHHHHHHcCCCEEEEccCCCC-----------cc----c---ccCHHHHHHHHHHHHHHhCCCCeEEEECCC--
Confidence 5667777 7888899999999987621 11 1 112445689999999999987 78888775
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|
T Consensus 201 -------~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~- 264 (393)
T 4dwd_A 201 -------GYSVGGAIRVGRALEDLGYSWFE--EPV------QHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG- 264 (393)
T ss_dssp -------CCCHHHHHHHHHHHHHTTCSEEE--CCS------CTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-
Confidence 33578899999999999999998 331 1224567788999999999999998 899999999999
Q ss_pred CcEEccc
Q 017733 316 TDLVAFG 322 (367)
Q Consensus 316 ~D~V~~g 322 (367)
+|+|.+-
T Consensus 265 ~d~v~~k 271 (393)
T 4dwd_A 265 VRMVQPD 271 (393)
T ss_dssp CCEECCC
T ss_pred CCEEEeC
Confidence 9999873
No 101
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=98.90 E-value=1.1e-07 Score=91.61 Aligned_cols=137 Identities=10% Similarity=0.069 Sum_probs=90.5
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
++.+.+.++|+|+++||... ++...+|. |.. ..+-.++.|+++|+.++ .||.+|...+
T Consensus 159 ~~~~~ve~~~adal~ihln~---~qe~~~p~---------Gd~--~~~~~~~~I~~l~~~~~-~PVivK~vg~------- 216 (365)
T 3sr7_A 159 AGLQAVRDLQPLFLQVHINL---MQELLMPE---------GER--EFRSWKKHLSDYAKKLQ-LPFILKEVGF------- 216 (365)
T ss_dssp HHHHHHHHHCCSCEEEEECH---HHHHTSSS---------SCC--CCHHHHHHHHHHHHHCC-SCEEEEECSS-------
T ss_pred HHHHHHHhcCCCEEEEeccc---cccccCCC---------CCC--cHHHHHHHHHHHHHhhC-CCEEEEECCC-------
Confidence 34444457899999999864 34444442 111 12236799999999984 5899995331
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCcccc---------------CCchhhHHHHHHHHHhc-CCcEEEeCCC-CHH
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL---------------TDKSETQRSLLSMRRAF-EGTFIAAGGY-SRD 305 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~---------------~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~ 305 (367)
+.+.+ .++.+.++|+|+|.++....... ....+....+..++... ++|||+.||+ +..
T Consensus 217 -g~s~e----~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~ 291 (365)
T 3sr7_A 217 -GMDVK----TIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPL 291 (365)
T ss_dssp -CCCHH----HHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHH
T ss_pred -CCCHH----HHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHH
Confidence 22333 56677889999999865421110 01112223444454332 6899999999 899
Q ss_pred HHHHHHHcCCCcEEcccHHHHh
Q 017733 306 EGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 306 ~a~~~L~~G~~D~V~~gR~~la 327 (367)
++.++|..| +|+|++||+++.
T Consensus 292 Dv~KaLalG-AdaV~ig~~~l~ 312 (365)
T 3sr7_A 292 DIIKALVLG-AKAVGLSRTMLE 312 (365)
T ss_dssp HHHHHHHHT-CSEEEESHHHHH
T ss_pred HHHHHHHcC-CCEEEECHHHHH
Confidence 999999999 999999999985
No 102
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.89 E-value=2.6e-08 Score=96.58 Aligned_cols=122 Identities=11% Similarity=0.163 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+.+.||..++|+.|.. ..--.++|++||+++|++ .|.|+.|.
T Consensus 142 e~~~~~a~~~~~~G~~~~K~KvG~~-------------------------~~~d~~~v~avR~~~g~~~~l~vDaN~--- 193 (368)
T 3q45_A 142 HKMAADAVQIKKNGFEIIKVKVGGS-------------------------KELDVERIRMIREAAGDSITLRIDANQ--- 193 (368)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHCSSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCC-------------------------HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 4567778888899999999987541 233578999999999987 68887664
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 194 ------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (368)
T 3q45_A 194 ------GWSVETAIETLTLLEPYNIQHCE--EPV------SRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQAC 259 (368)
T ss_dssp ------CBCHHHHHHHHHHHGGGCCSCEE--CCB------CGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCChHHHHHHHHHHhhcCCCEEE--CCC------ChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCC
Confidence 33578899999999999999998 331 1224456778999999999999998 89999999999999
Q ss_pred cEEccc
Q 017733 317 DLVAFG 322 (367)
Q Consensus 317 D~V~~g 322 (367)
|+|.+-
T Consensus 260 d~v~~k 265 (368)
T 3q45_A 260 DSFNLK 265 (368)
T ss_dssp SEEEEC
T ss_pred CeEEec
Confidence 998653
No 103
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.89 E-value=4.1e-08 Score=97.32 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccc----h--HHHhhcCcccc-----cCC---CCCCC--chhhHhHHHHHHHHHHHHH
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANG----Y--LIDQFMKDQVN-----DRT---DEYGG--SLENRCRFALEVVEAVVRE 222 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~g----y--Ll~qFlsp~~N-----~R~---D~yGg--s~enr~r~~~eii~aiR~~ 222 (367)
+++++.|+.+++.||.++++..+.. | .-...++.... .+. ..-|. +.....+...++|++||++
T Consensus 157 e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a 236 (440)
T 3t6c_A 157 VEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDHLRNK 236 (440)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHh
Confidence 4567778888899999999997631 0 00000000000 000 00010 1222356789999999999
Q ss_pred hCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCC
Q 017733 223 IGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGG 301 (367)
Q Consensus 223 vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 301 (367)
+|++ .|.|+.|. ..+.+++..+++.|++.|++||+ ++. .+.+...++.|++.+++||++.+.
T Consensus 237 ~G~d~~L~vDaN~---------~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~ 299 (440)
T 3t6c_A 237 LGFSVELLHDAHE---------RITPINAIHMAKALEPYQLFFLE--DPV------APENTEWLKMLRQQSSTPIAMGEL 299 (440)
T ss_dssp HCSSSEEEEECTT---------CSCHHHHHHHHHHTGGGCCSEEE--CSS------CGGGGGGHHHHHHHCCSCEEECTT
T ss_pred cCCCCeEEEECCC---------CCCHHHHHHHHHHhhhcCCCEEE--CCC------ChhhHHHHHHHHhhcCCCEEeCcc
Confidence 9987 68888875 33578899999999999999998 442 122445678899999999999999
Q ss_pred C-CHHHHHHHHHcCCCcEEcccHH
Q 017733 302 Y-SRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 302 i-t~~~a~~~L~~G~~D~V~~gR~ 324 (367)
+ ++++++++++.|.+|+|.+--.
T Consensus 300 ~~~~~~~~~~i~~~a~d~v~~k~~ 323 (440)
T 3t6c_A 300 FVNVNEWKPLIDNKLIDYIRCHIS 323 (440)
T ss_dssp CCSHHHHHHHHHTTCCSEECCCGG
T ss_pred cCCHHHHHHHHHcCCccceeechh
Confidence 8 8999999999999999887543
No 104
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.89 E-value=3.3e-08 Score=96.30 Aligned_cols=124 Identities=15% Similarity=0.186 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+.+. ||..++|+.|.. + ..--.++|++||+++|++ .|.|+.|.
T Consensus 150 ~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDan~-- 203 (383)
T 3i4k_A 150 DVAVAEIEERIEEFGNRSFKLKMGAG--------------------D----PAEDTRRVAELAREVGDRVSLRIDINA-- 203 (383)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCSS--------------------C----HHHHHHHHHHHHHTTTTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCcEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 4556667777776 999999997641 1 234588999999999987 68888765
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.
T Consensus 204 -------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 268 (383)
T 3i4k_A 204 -------RWDRRTALHYLPILAEAGVELFE--QPT------PADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQA 268 (383)
T ss_dssp -------CSCHHHHHHHHHHHHHTTCCEEE--SCS------CTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEE--CCC------ChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCC
Confidence 33578899999999999999998 331 1234567888999999999999998 8999999999999
Q ss_pred CcEEcccH
Q 017733 316 TDLVAFGR 323 (367)
Q Consensus 316 ~D~V~~gR 323 (367)
+|+|.+--
T Consensus 269 ~d~v~~k~ 276 (383)
T 3i4k_A 269 ADVIALKT 276 (383)
T ss_dssp CSEEEECT
T ss_pred CCEEEEcc
Confidence 99998753
No 105
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=98.88 E-value=1.6e-08 Score=97.87 Aligned_cols=102 Identities=19% Similarity=0.187 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc--c-----cC--------
Q 017733 212 ALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI--Q-----LT-------- 276 (367)
Q Consensus 212 ~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~--~-----~~-------- 276 (367)
..+.|++||+.++ .||.+|.-.. +.+. +.++.+.++|+|+|.++..... . ..
T Consensus 175 ~~~~i~~i~~~~~-vPVivK~vG~--------g~s~----~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~ 241 (368)
T 3vkj_A 175 ALEKLRDISKELS-VPIIVKESGN--------GISM----ETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKA 241 (368)
T ss_dssp HHHHHHHHHTTCS-SCEEEECSSS--------CCCH----HHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHH
T ss_pred HHHHHHHHHHHcC-CCEEEEeCCC--------CCCH----HHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccch
Confidence 5788999999874 4899986321 2233 3577888999999998543211 0 00
Q ss_pred --------CchhhHHHHHHHHHhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 277 --------DKSETQRSLLSMRRAFE-GTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 277 --------~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
...+....+..+++.++ +|||++||+ ++.++.++|..| +|+|++||+++.
T Consensus 242 ~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~GGI~~~~d~~kal~lG-A~~v~ig~~~l~ 301 (368)
T 3vkj_A 242 ESAKNFLDWGVPTAASIMEVRYSVPDSFLVGSGGIRSGLDAAKAIALG-ADIAGMALPVLK 301 (368)
T ss_dssp HHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHH
T ss_pred hhccccccccccHHHHHHHHHHHcCCCcEEEECCCCCHHHHHHHHHcC-CCEEEEcHHHHH
Confidence 01112244567888875 899999999 899999999999 999999999994
No 106
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.87 E-value=5.1e-08 Score=94.64 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++. ||..++|+.+.. + ..--.++|++||+++|++ .|.|+.|.
T Consensus 153 ~~~~~~a~~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~-- 206 (372)
T 3tj4_A 153 EDLLAGSARAVEEDGFTRLKIKVGHD--------------------D----PNIDIARLTAVRERVDSAVRIAIDGNG-- 206 (372)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCCS--------------------S----HHHHHHHHHHHHHHSCTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHccCCCEEEEcCCCC--------------------C----HHHHHHHHHHHHHHcCCCCcEEeeCCC--
Confidence 4566777888888 999999997641 1 233588999999999987 68887765
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.+++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.
T Consensus 207 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 271 (372)
T 3tj4_A 207 -------KWDLPTCQRFCAAAKDLDIYWFE--EPL------WYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGA 271 (372)
T ss_dssp -------CCCHHHHHHHHHHTTTSCEEEEE--SCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhcCCCEEE--CCC------CchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCC
Confidence 33578899999999999999998 431 1234567788999999999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 272 ~d~v~~ 277 (372)
T 3tj4_A 272 VAYVQP 277 (372)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999887
No 107
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.85 E-value=1.2e-09 Score=100.14 Aligned_cols=88 Identities=15% Similarity=0.028 Sum_probs=0.0
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
+..++++.+++.|+++|.++......... ......++.+++.+++||+++||+ +++++.++++.| +|.|++||+++.
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~~-g~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~~~~~G-ad~v~vg~al~~ 234 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVE 234 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCcC-CCCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHcC-CcHhhccHHHHc
Confidence 45678889999999999887543322111 134567788999899999999999 799999999998 999999999999
Q ss_pred CCchHHHHHhC
Q 017733 328 NPDLPKRFELN 338 (367)
Q Consensus 328 dP~l~~k~~~g 338 (367)
+|++++++++.
T Consensus 235 ~p~~~~~~~~~ 245 (247)
T 3tdn_A 235 NPSLITQIAQT 245 (247)
T ss_dssp -----------
T ss_pred CcHHHHHHHHh
Confidence 99999998763
No 108
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.85 E-value=5e-08 Score=95.04 Aligned_cols=122 Identities=18% Similarity=0.235 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++. ||..++|..|.. + ..--.++|++||+++|++ .|.|+.|.
T Consensus 169 e~~~~~a~~~~~~~G~~~~KlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~-- 222 (383)
T 3toy_A 169 RDDERTLRTACDEHGFRAIKSKGGHG--------------------D----LATDEAMIKGLRALLGPDIALMLDFNQ-- 222 (383)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSS--------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT--
T ss_pred HHHHHHHHHHHHccCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCeEEEeCCC--
Confidence 5667778888889 999999987641 1 234578999999999987 68887765
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.
T Consensus 223 -------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 287 (383)
T 3toy_A 223 -------SLDPAEATRRIARLADYDLTWIE--EPV------PQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGA 287 (383)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999998 431 1224566788999999999999998 7999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 288 ~d~v~i 293 (383)
T 3toy_A 288 SDFIMP 293 (383)
T ss_dssp CSEECC
T ss_pred CCEEEe
Confidence 999876
No 109
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=98.85 E-value=4.9e-08 Score=87.68 Aligned_cols=132 Identities=11% Similarity=0.096 Sum_probs=92.1
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
+..+.++|+|.|.++...- .+.+ ..+.++++++|+.++..++++...
T Consensus 81 i~~~~~~Gad~v~l~~~~~------------~~p~----------~~~~~~i~~~~~~~~~~~v~~~~~----------- 127 (223)
T 1y0e_A 81 VDELIESQCEVIALDATLQ------------QRPK----------ETLDELVSYIRTHAPNVEIMADIA----------- 127 (223)
T ss_dssp HHHHHHHTCSEEEEECSCS------------CCSS----------SCHHHHHHHHHHHCTTSEEEEECS-----------
T ss_pred HHHHHhCCCCEEEEeeecc------------cCcc----------cCHHHHHHHHHHhCCCceEEecCC-----------
Confidence 3445789999999987431 1110 124789999999985335665332
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCcccc--CC--chhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQL--TD--KSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~--~~--~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
+.++ +..+++.|+|+|.+....+... .. ..+....++.+++.+++||++.||+ |++++.++++.| +|+|
T Consensus 128 -t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~G-ad~v 201 (223)
T 1y0e_A 128 -TVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLG-VHCS 201 (223)
T ss_dssp -SHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTT-CSEE
T ss_pred -CHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcC-CCEE
Confidence 2333 3346788999998654433211 11 2334567888999899999999999 999999999999 9999
Q ss_pred cccHHHHhCCchHHHHH
Q 017733 320 AFGRLFLANPDLPKRFE 336 (367)
Q Consensus 320 ~~gR~~ladP~l~~k~~ 336 (367)
++||+++. |+++.+..
T Consensus 202 ~vG~al~~-p~~~~~~~ 217 (223)
T 1y0e_A 202 VVGGAITR-PKEITKRF 217 (223)
T ss_dssp EECHHHHC-HHHHHHHH
T ss_pred EEChHHcC-cHHHHHHH
Confidence 99999665 87765543
No 110
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.85 E-value=3.7e-08 Score=95.41 Aligned_cols=122 Identities=14% Similarity=0.163 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+.+. ||..++++.|.. + + +--.++|++||+++|++ .|.++.|.
T Consensus 141 ~~~~~~a~~~~~~~G~~~~K~K~g~~--------~-------------~---~~d~~~v~avR~a~g~~~~l~vDan~-- 194 (367)
T 3dg3_A 141 VKMVAEAERIRETYGINTFKVKVGRR--------P-------------V---QLDTAVVRALRERFGDAIELYVDGNR-- 194 (367)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECCCS--------S-------------T---HHHHHHHHHHHHHHGGGSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCccEEEEeeCCC--------h-------------h---hhHHHHHHHHHHHhCCCCEEEEECCC--
Confidence 5667778888888 999999987641 1 0 13478999999999877 67777654
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.
T Consensus 195 -------~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 259 (367)
T 3dg3_A 195 -------GWSAAESLRAMREMADLDLLFAE--ELC------PADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGS 259 (367)
T ss_dssp -------CSCHHHHHHHHHHTTTSCCSCEE--SCS------CTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTS
T ss_pred -------CCCHHHHHHHHHHHHHhCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 33578899999999999999998 431 1224566788999999999999998 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 260 ~d~v~~ 265 (367)
T 3dg3_A 260 ATAISI 265 (367)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999977
No 111
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.84 E-value=1.2e-07 Score=87.64 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH
Q 017733 212 ALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR 290 (367)
Q Consensus 212 ~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~ 290 (367)
..++++++|+.+++. .++. +.. . +.+ .++++++.|.||| ++.+..............++.+++
T Consensus 112 ~~~~~~~a~~~~~~g~~vi~-~~~---------~-~~~----~a~~~~~~gad~v-~~~~~~~Gt~~~~~~~~~l~~i~~ 175 (264)
T 1xm3_A 112 PVETLKASEQLLEEGFIVLP-YTS---------D-DVV----LARKLEELGVHAI-MPGASPIGSGQGILNPLNLSFIIE 175 (264)
T ss_dssp HHHHHHHHHHHHHTTCCEEE-EEC---------S-CHH----HHHHHHHHTCSCB-EECSSSTTCCCCCSCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCeEEEE-EcC---------C-CHH----HHHHHHHhCCCEE-EECCcccCCCCCCCCHHHHHHHHh
Confidence 357888999988765 3332 222 1 122 3556677899998 442221111111112457788888
Q ss_pred hcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 291 AFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 291 ~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
..++||++.||| +++++.++++.| +|.|.+|++++..++
T Consensus 176 ~~~iPviv~gGI~t~eda~~~~~~G-AdgViVGSAi~~a~d 215 (264)
T 1xm3_A 176 QAKVPVIVDAGIGSPKDAAYAMELG-ADGVLLNTAVSGADD 215 (264)
T ss_dssp HCSSCBEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTSSS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEEcHHHhCCCC
Confidence 889999999999 799999999999 999999999996544
No 112
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.84 E-value=6.7e-08 Score=94.37 Aligned_cols=125 Identities=17% Similarity=0.247 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHh---CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCC
Q 017733 159 NDFRLAARNAIEA---GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSP 234 (367)
Q Consensus 159 ~~f~~aA~~a~~a---GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~ 234 (367)
+++++.|+.+++. ||..++|..|.. + ..--.++|++||+++|++ .|.|+.|.
T Consensus 173 e~~~~~a~~~~~~~~~G~~~iKlKvG~~--------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~ 228 (390)
T 3ugv_A 173 EVAAEAVELKAEGQGTGFKGLKLRMGRD--------------------D----PAVDIETAEAVWDAVGRDTALMVDFNQ 228 (390)
T ss_dssp HHHHHHHHHHHTTCTTCCSEEEEECCCS--------------------S----HHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred HHHHHHHHHHHHhhhCCCcEEEEecCCC--------------------C----HHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4567778888888 999999987641 1 234578999999999987 68887765
Q ss_pred CccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc
Q 017733 235 YAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.
T Consensus 229 ---------~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 291 (390)
T 3ugv_A 229 ---------GLDMAEAMHRTRQIDDLGLEWIE--EPV------VYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQA 291 (390)
T ss_dssp ---------CCCHHHHHHHHHHHTTSCCSEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred ---------CCCHHHHHHHHHHHHhhCCCEEE--CCC------CcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHc
Confidence 33578899999999999999998 431 1224566788999999999999998 89999999999
Q ss_pred CCCcEEcccHH
Q 017733 314 NYTDLVAFGRL 324 (367)
Q Consensus 314 G~~D~V~~gR~ 324 (367)
|.+|+|.+--.
T Consensus 292 ~a~d~v~ik~~ 302 (390)
T 3ugv_A 292 GACDLVMPDFM 302 (390)
T ss_dssp TCCSEECCBHH
T ss_pred CCCCEEEeCcc
Confidence 99999976433
No 113
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=98.83 E-value=9e-08 Score=91.64 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHH
Q 017733 209 CRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSM 288 (367)
Q Consensus 209 ~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~i 288 (367)
..+.-+.|+++|+.++ .||.+|... +.+ .++.+.+.|+|.|.+++....+....++....+..+
T Consensus 202 ~~~~w~~i~~lr~~~~-~PvivK~v~-----------~~e----~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i 265 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITR-LPIILKGIL-----------TKE----DAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREV 265 (352)
T ss_dssp TTCCHHHHHHHHHHCC-SCEEEEEEC-----------SHH----HHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcC-CCEEEEecC-----------cHH----HHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHH
Confidence 4566789999999984 488888764 123 466778899999999764332333444556777888
Q ss_pred HHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 289 RRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 289 r~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
++.+ ++|||+.||| +..++.++|..| +|+|++||+++..
T Consensus 266 ~~av~~~ipVia~GGI~~g~Dv~kaLalG-A~aV~iGr~~l~~ 307 (352)
T 3sgz_A 266 VAAVKGKIEVYMDGGVRTGTDVLKALALG-ARCIFLGRPILWG 307 (352)
T ss_dssp HHHHTTSSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHH
T ss_pred HHHhCCCCeEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHHH
Confidence 8887 6899999999 899999999998 9999999999964
No 114
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=98.82 E-value=2.7e-08 Score=97.50 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=97.8
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCch-hhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSL-ENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~-enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~ 240 (367)
+.|+.+++.||..++|+.+...-.. .++|.. ....+..+++|++||+++|++ .|.|+.|.
T Consensus 158 ~~a~~~~~~G~~~~Kik~g~~~~~~------------~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~------ 219 (400)
T 4dxk_A 158 ELAHSLLEDGITAMKIWPFDAAAEK------------TRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHS------ 219 (400)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHH------------HTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTT------
T ss_pred HHHHHHHHhCCCEEEEcCCCccccc------------cccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC------
Confidence 3455677899999999865210000 011211 123678899999999999977 68888775
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
..+.+++..+++.|++.+++||+ ++. .+.+...++.|++.+++||++.+.+ ++++++++++.|.+|+|
T Consensus 220 ---~~~~~~A~~~~~~L~~~~i~~iE--eP~------~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v 288 (400)
T 4dxk_A 220 ---MWQLLPAMQIAKALTPYQTFWHE--DPI------KMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVV 288 (400)
T ss_dssp ---CBCHHHHHHHHHHTGGGCCSEEE--CCB------CTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEE
T ss_pred ---CCCHHHHHHHHHHHhhcCCCEEE--cCC------CcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEE
Confidence 34578899999999999999998 331 1123455788999999999999998 79999999999999998
Q ss_pred cc
Q 017733 320 AF 321 (367)
Q Consensus 320 ~~ 321 (367)
.+
T Consensus 289 ~~ 290 (400)
T 4dxk_A 289 ML 290 (400)
T ss_dssp EE
T ss_pred Ee
Confidence 76
No 115
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.82 E-value=5.5e-08 Score=95.03 Aligned_cols=127 Identities=17% Similarity=0.189 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceE-EEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVG-MRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~-vrls~~~ 236 (367)
+++++.|+.+++.||+.++|+.|+. .+-..++|++||+++|++ .|. |+.|.
T Consensus 144 e~~~~~a~~~~~~G~~~~KiKvG~~-------------------------~~~d~~~v~avR~a~g~~~~l~~vDan~-- 196 (391)
T 3gd6_A 144 ESNLDVVRQKLEQGFDVFRLYVGKN-------------------------LDADEEFLSRVKEEFGSRVRIKSYDFSH-- 196 (391)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSC-------------------------HHHHHHHHHHHHHHHGGGCEEEEEECTT--
T ss_pred HHHHHHHHHHHHcCCCEEEEeeCCC-------------------------HHHHHHHHHHHHHHcCCCCcEEEecCCC--
Confidence 5678888888999999999997641 234589999999999977 577 77664
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCc--cEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKL--LYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gv--d~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
..+.+++.++++.|++.|+ +||+ ++. .+.+...++.+++.+++|| .+.+ ++++++++++.
T Consensus 197 -------~~~~~~A~~~~~~l~~~~i~~~~iE--qP~------~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~ 259 (391)
T 3gd6_A 197 -------LLNWKDAHRAIKRLTKYDLGLEMIE--SPA------PRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIKK 259 (391)
T ss_dssp -------CSCHHHHHHHHHHHTTCCSSCCEEE--CCS------CTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHHH
T ss_pred -------CcCHHHHHHHHHHHHhcCCCcceec--CCC------ChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHHc
Confidence 3357889999999999999 9988 431 1234567888999999999 5666 89999999999
Q ss_pred CCCcEEcccHHHHhCC
Q 017733 314 NYTDLVAFGRLFLANP 329 (367)
Q Consensus 314 G~~D~V~~gR~~ladP 329 (367)
|.+|+|.+--..+--.
T Consensus 260 ~~~d~v~~k~~~~GGi 275 (391)
T 3gd6_A 260 DAIDIFNISPVFIGGL 275 (391)
T ss_dssp TCCSEEEECHHHHTSH
T ss_pred CCCCEEEECchhcCCH
Confidence 9999999877666554
No 116
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.80 E-value=9e-08 Score=94.05 Aligned_cols=131 Identities=13% Similarity=0.204 Sum_probs=97.6
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCch-hhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSL-ENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECA 239 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~-enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~ 239 (367)
.+.|+.+++.||..++++-.. + .. ++-|+.. ....+..+++|++||+++|++ .|.|+.|.
T Consensus 161 ~~~a~~~~~~G~~~~K~~~~~-~---------~~---~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~----- 222 (410)
T 3dip_A 161 GVLAESLVAEGYAAMKIWPFD-D---------FA---SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS----- 222 (410)
T ss_dssp HHHHHHHHHTTCSEEEECTTH-H---------HH---TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT-----
T ss_pred HHHHHHHHHcCCCEEEECCcc-C---------cc---ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCC-----
Confidence 444566778999999995211 0 00 1112211 123567899999999999987 68888775
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
..+.+++.++++.|++.|++||+ ++. . .+.+...++.|++.+++||++.+.+ ++++++++|+.|.+|+
T Consensus 223 ----~~~~~~A~~~~~~L~~~~i~~iE--qP~----~-~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~ 291 (410)
T 3dip_A 223 ----LWGTHAAARICNALADYGVLWVE--DPI----A-KMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDF 291 (410)
T ss_dssp ----CBCHHHHHHHHHHGGGGTCSEEE--CCB----S-CTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred ----CCCHHHHHHHHHHHHhcCCCEEE--CCC----C-CcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCe
Confidence 34578899999999999999998 330 1 1224567788999999999999998 8999999999999999
Q ss_pred Ecc
Q 017733 319 VAF 321 (367)
Q Consensus 319 V~~ 321 (367)
|.+
T Consensus 292 v~~ 294 (410)
T 3dip_A 292 VML 294 (410)
T ss_dssp EEE
T ss_pred Eee
Confidence 876
No 117
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.79 E-value=3.3e-08 Score=95.41 Aligned_cols=126 Identities=10% Similarity=0.119 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+.+.||..++|+.++ + .+--.+++++||+++|++ .|.++.|.
T Consensus 142 ~~~~~~a~~~~~~G~~~~K~K~G~---------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~--- 193 (356)
T 3ro6_B 142 EETLAEAREHLALGFRVLKVKLCG---------------------D----EEQDFERLRRLHETLAGRAVVRVDPNQ--- 193 (356)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---------------------C----HHHHHHHHHHHHHHHTTSSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCC---------------------C----HHHHHHHHHHHHHHhCCCCEEEEeCCC---
Confidence 466777888888999999999764 1 234588999999999987 68887765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC-C
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN-Y 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G-~ 315 (367)
..+.+++.++++.|++.+++||+ ++. . +.+...++.+++.+++||++.+.+ ++++++++++.+ .
T Consensus 194 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~-----~-~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 259 (356)
T 3ro6_B 194 ------SYDRDGLLRLDRLVQELGIEFIE--QPF-----P-AGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAA 259 (356)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCCCEE--CCS-----C-TTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCS
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEE--CCC-----C-CCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCc
Confidence 33578899999999999999998 331 1 224566777888888999999998 899999999998 8
Q ss_pred CcEEcccHHHH
Q 017733 316 TDLVAFGRLFL 326 (367)
Q Consensus 316 ~D~V~~gR~~l 326 (367)
+|+|.+--..+
T Consensus 260 ~d~v~~k~~~~ 270 (356)
T 3ro6_B 260 CGIFNIKLMKC 270 (356)
T ss_dssp CSEEEECHHHH
T ss_pred CCEEEEccccc
Confidence 99998765444
No 118
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=98.79 E-value=8.6e-08 Score=94.53 Aligned_cols=141 Identities=13% Similarity=0.171 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccc-chHHHhhcCcccccCCCCCCC---chhhHhHHHHHHHHHHHHHhCCc-ceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGAN-GYLIDQFMKDQVNDRTDEYGG---SLENRCRFALEVVEAVVREIGAE-RVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~-gyLl~qFlsp~~N~R~D~yGg---s~enr~r~~~eii~aiR~~vg~~-~i~vrls 233 (367)
+++++.|+++.+.||..++++.+. ++-..++..+. +.+.+ ...+..+..++.|++||+++|++ .|.+..+
T Consensus 155 ~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan 229 (421)
T 4hnl_A 155 DDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPE-----EPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVH 229 (421)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCS-----SCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred HHHHHHHHHHHHhhHHHHhhccccccCCchhccccc-----cccccccccchhHHHHHHHHHHHHHHHhCCCceEecccc
Confidence 466788888899999999999875 22222332221 11112 23445678899999999999987 5777776
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVA 312 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 312 (367)
. ..+.+++.++++.|++.++.|++ ++- .+.+....+.|++.+++||++...+ ++++++++|+
T Consensus 230 ~---------~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~ 292 (421)
T 4hnl_A 230 E---------RLHPNQAIQFAKAAEPYQLFFLE--DIL------PPDQSHWLTQLRSQSATPIATGELFNNPMEWQELVK 292 (421)
T ss_dssp T---------CSCHHHHHHHHHHHGGGCCSEEE--CCS------CGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHH
T ss_pred c---------cCCHHHHHHHHHHhhhhhhcccc--cCC------cccchHHHHHHHhcCCCCeecCcceehhHHHHHHHh
Confidence 5 33578899999999999999988 441 2234556788999999999998888 8999999999
Q ss_pred cCCCcEEcc
Q 017733 313 ANYTDLVAF 321 (367)
Q Consensus 313 ~G~~D~V~~ 321 (367)
.+.+|+|.+
T Consensus 293 ~~a~d~v~~ 301 (421)
T 4hnl_A 293 NRQIDFMRA 301 (421)
T ss_dssp TTCCSEECC
T ss_pred cCCceEEEe
Confidence 999999875
No 119
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=98.77 E-value=2.7e-08 Score=90.94 Aligned_cols=88 Identities=15% Similarity=0.028 Sum_probs=73.8
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
+..++++.+++.|+++|+++....... ....+...++.+++.+++||+++|++ ++++++++++.| +|.|.+||.++.
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~G-ad~V~ig~~~l~ 113 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRG-ADKVSINTAAVE 113 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEECCSHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccC-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCeeehhhHHhh
Confidence 356799999999999999976543221 12345678899999999999999999 899999999999 999999999999
Q ss_pred CCchHHHHHhC
Q 017733 328 NPDLPKRFELN 338 (367)
Q Consensus 328 dP~l~~k~~~g 338 (367)
||+|+.++.+.
T Consensus 114 dp~~~~~~~~~ 124 (247)
T 3tdn_A 114 NPSLITQIAQT 124 (247)
T ss_dssp CTHHHHHHHHH
T ss_pred ChHHHHHHHHH
Confidence 99999888753
No 120
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.77 E-value=4.5e-08 Score=88.67 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=89.7
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
+.++.+.++|+|.|.+|... +.+.+ | ..+.++++.+|+..+...+++.++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~------------~~~~~--~-------~~~~~~i~~i~~~~~~~~v~~~~~t-------- 142 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTK------------RDRHD--G-------LDIASFIRQVKEKYPNQLLMADIST-------- 142 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCS------------SCCTT--C-------CCHHHHHHHHHHHCTTCEEEEECSS--------
T ss_pred HHHHHHHHcCCCEEEEcccc------------cCCCC--C-------ccHHHHHHHHHHhCCCCeEEEeCCC--------
Confidence 44556788999999999765 12221 1 1347899999999853366664432
Q ss_pred CCChHHHHHHHHHHhhhcCccEE--EEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 243 DSNPEALGLYMAKALNKFKLLYL--HVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i--~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
.++ +..+.+.|+|+| ++.................++.+++. ++||++.||+ |++++.++++.| +|.|
T Consensus 143 ----~~e----a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~~~G-ad~v 212 (234)
T 1yxy_A 143 ----FDE----GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKINDLG-VAGI 212 (234)
T ss_dssp ----HHH----HHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHTTC-CSEE
T ss_pred ----HHH----HHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHHHCC-CCEE
Confidence 232 455677899999 44332111111122345667888887 8999999999 599999999998 9999
Q ss_pred cccHHHHhCCch
Q 017733 320 AFGRLFLANPDL 331 (367)
Q Consensus 320 ~~gR~~ladP~l 331 (367)
++||+++. |..
T Consensus 213 ~vGsal~~-p~~ 223 (234)
T 1yxy_A 213 VVGGAITR-PKE 223 (234)
T ss_dssp EECHHHHC-HHH
T ss_pred EEchHHhC-hHH
Confidence 99999887 754
No 121
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.77 E-value=1.6e-07 Score=91.52 Aligned_cols=126 Identities=13% Similarity=0.150 Sum_probs=95.1
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCC
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~ 245 (367)
...+.||..++|+.+... ..-.+++ ++-..++|++||+++|++ .|.|+.|. ..
T Consensus 157 ~~~~~Gf~~~K~KvG~~~----------~~d~~~~-------~~~~~~~v~avReavG~d~~l~vDaN~---------~~ 210 (388)
T 3tcs_A 157 LRDTQGFTAFKVRAGAEV----------GRNRDEW-------PGRTEEIIPTMRRELGDDVDLLIDANS---------CY 210 (388)
T ss_dssp HHHHHCCCEEEEECSCTT----------CTTCCSS-------TTHHHHHHHHHHHHHCSSSEEEEECTT---------CC
T ss_pred HHHhcCCCEEEEccCCCc----------ccccccc-------hhHHHHHHHHHHHHhCCCCeEEEeCCC---------Cc
Confidence 345789999999987520 0001111 223578999999999987 68887775 33
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~ 324 (367)
+.+++.++++.|++.+++|++ ++. .+.+...++.+++.+++||++.+.+ +++++.++++.|.+|+|.+--.
T Consensus 211 ~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 211 TPDRAIEVGHMLQDHGFCHFE--EPC------PYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE--CCS------CTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred CHHHHHHHHHHHhhcCCeEEE--CCC------CccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 578899999999999999987 441 1224566788999999999999988 8999999999999999987544
Q ss_pred HH
Q 017733 325 FL 326 (367)
Q Consensus 325 ~l 326 (367)
.+
T Consensus 283 ~~ 284 (388)
T 3tcs_A 283 YL 284 (388)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 122
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.76 E-value=1.8e-07 Score=90.91 Aligned_cols=124 Identities=10% Similarity=0.184 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..++|+.+. + .+--.+.|++||+++|++ .|.|..|.
T Consensus 144 e~~~~~a~~~~~~Gf~~~KlK~g~---------------------~----~~~d~~~v~avR~a~g~~~~L~vDaN~--- 195 (379)
T 3r0u_A 144 AETIQNIQNGVEANFTAIKVKTGA---------------------D----FNRDIQLLKALDNEFSKNIKFRFDANQ--- 195 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHCCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEeeecCC---------------------C----HHHHHHHHHHHHHhcCCCCeEEEeCCC---
Confidence 456777888888999999998752 1 234588999999999976 67777664
Q ss_pred ccccCCCChHHHHHHHHHHhhh--cCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNK--FKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~--~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++ .+++|++ ++. .+.+...++.+++.+++||++.+.+ +++++.++++.|
T Consensus 196 ------~w~~~~A~~~~~~l~~~~~~l~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 261 (379)
T 3r0u_A 196 ------GWNLAQTKQFIEEINKYSLNVEIIE--QPV------KYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQ 261 (379)
T ss_dssp ------CCCHHHHHHHHHHHHTSCCCEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTT
T ss_pred ------CcCHHHHHHHHHHHhhcCCCcEEEE--CCC------CcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC
Confidence 3357889999999999 8899987 431 1234567788999999999999988 899999999999
Q ss_pred CCcEEcccHH
Q 017733 315 YTDLVAFGRL 324 (367)
Q Consensus 315 ~~D~V~~gR~ 324 (367)
.+|+|.+--.
T Consensus 262 a~d~v~~k~~ 271 (379)
T 3r0u_A 262 ACNMINIKLA 271 (379)
T ss_dssp CCSEEEECHH
T ss_pred CCCEEEECcc
Confidence 9999876433
No 123
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=98.76 E-value=3.9e-08 Score=94.94 Aligned_cols=134 Identities=17% Similarity=0.125 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.+.++.+.++|+|.|.|+.+||+ .+...+.|+++|+..+..+|.+---.
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~------------------------~~~~~~~I~~ik~~~p~v~Vi~G~v~------ 158 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGH------------------------SEGVLQRIRETRAAYPHLEIIGGNVA------ 158 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT------------------------SHHHHHHHHHHHHHCTTCEEEEEEEC------
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC------------------------CHHHHHHHHHHHHhcCCCceEeeeeC------
Confidence 356677888999999999988751 23568899999999854354432111
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEec--CC-ccc---cCCchhhHHHHHHHHH---hcCCcEEEeCCC-CHHHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIE--PR-MIQ---LTDKSETQRSLLSMRR---AFEGTFIAAGGY-SRDEGNKA 310 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~--~~-~~~---~~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 310 (367)
+.+ .++.+.++|+|+|.+.. +. +.. .....+....+..+++ .+++|||+.||+ ++.++.++
T Consensus 159 -----t~e----~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~ka 229 (366)
T 4fo4_A 159 -----TAE----GARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKA 229 (366)
T ss_dssp -----SHH----HHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHH
T ss_pred -----CHH----HHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHH
Confidence 233 45667789999999821 11 110 0011233444555554 568999999999 89999999
Q ss_pred HHcCCCcEEcccHHHHhCCchHHH
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k 334 (367)
|+.| +|.|++|+.|+..++-+-.
T Consensus 230 la~G-Ad~V~vGs~f~~t~Esp~~ 252 (366)
T 4fo4_A 230 IAAG-ASCVMVGSMFAGTEEAPGE 252 (366)
T ss_dssp HHTT-CSEEEESTTTTTBTTSSSC
T ss_pred HHcC-CCEEEEChHhhcCCCCCch
Confidence 9999 9999999999998875544
No 124
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.76 E-value=3.4e-08 Score=99.18 Aligned_cols=133 Identities=21% Similarity=0.132 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+.|+.+.++|+|.|+|+.+||+ ...+.+.|+++|+.++..+|.+.- .
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g~------------------------~~~~~~~v~~i~~~~p~~~Vi~g~-v----- 278 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHGH------------------------SKGVIERVRWVKQTFPDVQVIGGN-I----- 278 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCCS------------------------BHHHHHHHHHHHHHCTTSEEEEEE-E-----
T ss_pred chHHHHHHHhhcccceEEecccCCc------------------------chhHHHHHHHHHHHCCCceEEEee-e-----
Confidence 5677788888999999999999862 245789999999999644555521 1
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc---c---cCCchhhHHHHHHHHHhc---CCcEEEeCCC-CHHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI---Q---LTDKSETQRSLLSMRRAF---EGTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~---~---~~~~~~~~~~~~~ir~~~---~~pvi~~Ggi-t~~~a~~ 309 (367)
.+.+ .++.+.++|+|+|.+..+.-. . .....+....+..+.+.+ ++|||+.||+ +++++.+
T Consensus 279 -----~t~e----~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k 349 (490)
T 4avf_A 279 -----ATAE----AAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAK 349 (490)
T ss_dssp -----CSHH----HHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHH
T ss_pred -----CcHH----HHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHH
Confidence 1223 466788899999988322110 0 111123445566666643 6899999999 8999999
Q ss_pred HHHcCCCcEEcccHHHHhCCchH
Q 017733 310 AVAANYTDLVAFGRLFLANPDLP 332 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l~ 332 (367)
+|+.| +|+|++|+.|+.-.+=+
T Consensus 350 al~~G-Ad~V~vGs~~~~~~Esp 371 (490)
T 4avf_A 350 AMVAG-AYCVMMGSMFAGTEEAP 371 (490)
T ss_dssp HHHHT-CSEEEECTTTTTBTTSS
T ss_pred HHHcC-CCeeeecHHHhcCCCCC
Confidence 99999 99999999998876544
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.76 E-value=2.9e-08 Score=99.80 Aligned_cols=132 Identities=17% Similarity=0.091 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+.|+.+.++|+|.|+|+.+|| ..+.+.++|+++|+.++..+|.+.- .
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g------------------------~~~~~~~~i~~ir~~~p~~~Vi~g~-v----- 280 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHG------------------------HSEGVLQRIRETRAAYPHLEIIGGN-V----- 280 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCT------------------------TSHHHHHHHHHHHHHCTTCCEEEEE-E-----
T ss_pred chHHHHHHHHhccCceEEeccccc------------------------cchHHHHHHHHHHHHCCCceEEEcc-c-----
Confidence 456778888899999999999884 1356789999999999644665521 1
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc------cCCchhhHHHHHHHHHh---cCCcEEEeCCC-CHHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ------LTDKSETQRSLLSMRRA---FEGTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~------~~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~ 309 (367)
.+. +.++.+.++|+|+|.+..+.-.. .....+....+..+.+. .++|||+.||+ ++.++.+
T Consensus 281 -----~t~----e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k 351 (496)
T 4fxs_A 281 -----ATA----EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK 351 (496)
T ss_dssp -----CSH----HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred -----CcH----HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH
Confidence 122 34567788999999875321110 01112344455555553 47999999999 8999999
Q ss_pred HHHcCCCcEEcccHHHHhCCch
Q 017733 310 AVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l 331 (367)
+|+.| +|+|++||.|+.-.+=
T Consensus 352 ala~G-Ad~V~iGs~f~~t~Es 372 (496)
T 4fxs_A 352 AIAAG-ASCVMVGSMFAGTEEA 372 (496)
T ss_dssp HHHTT-CSEEEESTTTTTBTTS
T ss_pred HHHcC-CCeEEecHHHhcCCCC
Confidence 99999 9999999999986653
No 126
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.75 E-value=3.9e-08 Score=89.51 Aligned_cols=86 Identities=13% Similarity=0.003 Sum_probs=70.0
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc---CCCcEEcccHHH
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA---NYTDLVAFGRLF 325 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~---G~~D~V~~gR~~ 325 (367)
..++++.+++.|++.|.++..+....... .....++.+++.+++||+++||+ +++++.++++. | +|.|++||++
T Consensus 151 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-ad~v~vG~al 228 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVTDITKDGTLGG-PNLDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRG-VEGAIVGKAL 228 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEETTTTTTTSC-CCHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHH
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccccCC-CCHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCC-CCEEEEcHHH
Confidence 45677888889999988876554332222 35677888998889999999999 68999999988 6 9999999999
Q ss_pred HhCCchHHHHHh
Q 017733 326 LANPDLPKRFEL 337 (367)
Q Consensus 326 ladP~l~~k~~~ 337 (367)
+.+|+++.++++
T Consensus 229 ~~~~~~~~~~~~ 240 (244)
T 2y88_A 229 YARRFTLPQALA 240 (244)
T ss_dssp HTTSSCHHHHHH
T ss_pred HCCCcCHHHHHH
Confidence 999998887765
No 127
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.75 E-value=1.1e-06 Score=85.67 Aligned_cols=131 Identities=18% Similarity=0.084 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
.++.+.++|+|.|.+|... ...+|+++ .+..+-|.++|+.++ .+|.++-
T Consensus 170 ~a~~~~~agad~i~i~~~~--------------~~~~~~~~-----~~~~~~i~~l~~~~~-~pvi~gg----------- 218 (393)
T 2qr6_A 170 IAPIVIKAGADLLVIQGTL--------------ISAEHVNT-----GGEALNLKEFIGSLD-VPVIAGG----------- 218 (393)
T ss_dssp HHHHHHHTTCSEEEEECSS--------------CCSSCCCC----------CHHHHHHHCS-SCEEEEC-----------
T ss_pred HHHHHHHCCCCEEEEeCCc--------------cccccCCC-----cccHHHHHHHHHhcC-CCEEECC-----------
Confidence 3455567899999987421 11123332 112334678888874 3666532
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccc---cCCchhhHHHHHHHHHh-------cC---CcEEEeCCC-CHHHHHH
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQ---LTDKSETQRSLLSMRRA-------FE---GTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~---~~~~~~~~~~~~~ir~~-------~~---~pvi~~Ggi-t~~~a~~ 309 (367)
-.+.++ ++.+.+.|+|.|.++.+.... .....+....+..+++. ++ +|||+.||+ +..++.+
T Consensus 219 i~t~e~----a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~k 294 (393)
T 2qr6_A 219 VNDYTT----ALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVK 294 (393)
T ss_dssp CCSHHH----HHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHH
T ss_pred cCCHHH----HHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHH
Confidence 113343 456667999999995432211 01123344555555554 44 899999999 8999999
Q ss_pred HHHcCCCcEEcccHHHHhCCc
Q 017733 310 AVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~ 330 (367)
+|..| +|+|++||+++..++
T Consensus 295 alalG-A~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 295 AIACG-ADAVVLGSPLARAEE 314 (393)
T ss_dssp HHHHT-CSEEEECGGGGGSTT
T ss_pred HHHcC-CCEEEECHHHHcCCC
Confidence 99999 999999999999886
No 128
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.73 E-value=7.1e-08 Score=93.78 Aligned_cols=124 Identities=10% Similarity=0.167 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
+.++.|+.+.+.||..++++.+.. + .+--.++|++||+++|++ .|.|+.|.
T Consensus 149 ~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~---- 200 (377)
T 3my9_A 149 ADLERMRAMVPAGHTVFKMKTGVK--------------------P----HAEELRILETMRGEFGERIDLRLDFNQ---- 200 (377)
T ss_dssp HHHHHHHHHTTTTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT----
T ss_pred HHHHHHHHHHHcCCCEEEEccCCC--------------------c----HHHHHHHHHHHHHHhCCCCeEEEeCCC----
Confidence 345566677778999999987641 1 234578999999999977 68887765
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
..+.+++.++++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.+|
T Consensus 201 -----~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d 267 (377)
T 3my9_A 201 -----ALTPFGAMKILRDVDAFRPTFIE--QPV------PRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAAD 267 (377)
T ss_dssp -----CCCTTTHHHHHHHHHTTCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCS
T ss_pred -----CcCHHHHHHHHHHHhhcCCCEEE--CCC------CccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCC
Confidence 22356688899999999999987 331 1234567888999999999999998 899999999999999
Q ss_pred EEcccHH
Q 017733 318 LVAFGRL 324 (367)
Q Consensus 318 ~V~~gR~ 324 (367)
+|.+--.
T Consensus 268 ~v~~k~~ 274 (377)
T 3my9_A 268 AISVKIM 274 (377)
T ss_dssp EEECCHH
T ss_pred EEEeccc
Confidence 9976433
No 129
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.71 E-value=6.5e-08 Score=93.91 Aligned_cols=117 Identities=14% Similarity=0.210 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+++.++||+.++|+.+ | +...++|++||+++ ++ .|.++.+.
T Consensus 150 ~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~--- 198 (375)
T 1r0m_A 150 QATVDLVRRHVEQGYRRIKLKIK----------P-----------------GWDVQPVRATREAF-PDIRLTVDANS--- 198 (375)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhcccEEEEecC----------h-----------------HHHHHHHHHHHHHc-CCCeEEEeCCC---
Confidence 45688899999999999999852 1 22378899999999 65 67777654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.++ .++++.|++.+++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 199 ------~~~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 263 (375)
T 1r0m_A 199 ------AYTLAD-AGRLRQLDEYDLTYIE--QPL------AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAG 263 (375)
T ss_dssp ------CCCGGG-HHHHHTTGGGCCSCEE--CCS------CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSC
T ss_pred ------CCCHHH-HHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCC
Confidence 223456 8899999999999998 331 1234566788999999999999998 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 264 d~v~i 268 (375)
T 1r0m_A 264 GVINL 268 (375)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99876
No 130
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.71 E-value=1.8e-07 Score=91.66 Aligned_cols=124 Identities=13% Similarity=0.127 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..++|+.+ | ..| .++|++||+++|++ .|.|..|.
T Consensus 165 e~~~~~a~~~~~~G~~~iKlKv~----------~----~~d-------------~~~v~avR~a~G~~~~L~vDaN~--- 214 (400)
T 3mwc_A 165 ETLIHQVEESLQEGYRRIKIKIK----------P----GWD-------------VEPLQETRRAVGDHFPLWTDANS--- 214 (400)
T ss_dssp HHHHHHHHHHHHHTCSCEEEECB----------T----TBS-------------HHHHHHHHHHHCTTSCEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeC----------c----chH-------------HHHHHHHHHhcCCCCEEEEeCCC---
Confidence 56778888888999999999862 1 122 78999999999987 68887665
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.++ .++++.|++.|++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 215 ------~w~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~ 279 (400)
T 3mwc_A 215 ------SFELDQ-WETFKAMDAAKCLFHE--QPL------HYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGIS 279 (400)
T ss_dssp ------CCCGGG-HHHHHHHGGGCCSCEE--SCS------CTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHH-HHHHHHHHhcCCCEEe--CCC------ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCC
Confidence 223455 6899999999999987 431 1234567788999999999999988 89999999999999
Q ss_pred cEEcccHHHHh
Q 017733 317 DLVAFGRLFLA 327 (367)
Q Consensus 317 D~V~~gR~~la 327 (367)
|+|.+--..+-
T Consensus 280 d~v~~k~~~~G 290 (400)
T 3mwc_A 280 NIWNIKIQRVG 290 (400)
T ss_dssp SEEEECHHHHT
T ss_pred CEEEEcchhhC
Confidence 99987554443
No 131
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.71 E-value=8.6e-08 Score=92.95 Aligned_cols=120 Identities=11% Similarity=0.096 Sum_probs=92.6
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~ 240 (367)
.++++...+.||..++|+.+.. + .+--.++|++||+++|++ .|.++.|.
T Consensus 148 ~~~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~~~g~~~~l~vDan~------ 197 (370)
T 1chr_A 148 DSAVEMIERRRHNRFKVKLGFR--------------------S----PQDDLIHMEALSNSLGSKAYLRVDVNQ------ 197 (370)
T ss_dssp HHHHHHHHTTCCCEEEEECSSS--------------------C----SHHHHHHHHHHHHHSSTTCCEEEECTT------
T ss_pred HHHHHHHHHCCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhcCCCCEEEEECCC------
Confidence 3444444448999999987641 1 233488999999999986 68887765
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V 319 (367)
..+.+++..+++.|++.|++||+ ++. .+.+...++.+++.+++||++.+.+ ++++++++++.|.+|+|
T Consensus 198 ---~~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v 266 (370)
T 1chr_A 198 ---AWDEQVASVYIPELEALGVELIE--QPV------GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVF 266 (370)
T ss_dssp ---CCCTTHHHHHTHHHHTTTEEEEE--CCS------CTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEE
T ss_pred ---CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEE
Confidence 22456788999999999999987 431 1234566788999999999999988 89999999999999998
Q ss_pred ccc
Q 017733 320 AFG 322 (367)
Q Consensus 320 ~~g 322 (367)
.+-
T Consensus 267 ~~k 269 (370)
T 1chr_A 267 SLK 269 (370)
T ss_dssp EEC
T ss_pred EEC
Confidence 763
No 132
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.69 E-value=9.2e-08 Score=92.62 Aligned_cols=117 Identities=15% Similarity=0.232 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+++.++||+.++|+.+ | +...++|++||+++ ++ .|.+..+.
T Consensus 143 ~~~~~~a~~~~~~G~~~iKik~~----------~-----------------~~d~~~v~avr~a~-~~~~l~vDan~--- 191 (369)
T 2zc8_A 143 EDTLRVVERHLEEGYRRIKLKIK----------P-----------------GWDYEVLKAVREAF-PEATLTADANS--- 191 (369)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------T-----------------TBSHHHHHHHHHHC-TTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhhhheeeeecC----------h-----------------hHHHHHHHHHHHHc-CCCeEEEecCC---
Confidence 56788899999999999999852 2 22378899999999 55 57776553
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.++ .++++.|++.+++||+ ++. .+.+....+.+++.+++||++.+.+ ++++++++++.|.+
T Consensus 192 ------~~~~~~-~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 256 (369)
T 2zc8_A 192 ------AYSLAN-LAQLKRLDELRLDYIE--QPL------AYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAG 256 (369)
T ss_dssp ------CCCGGG-HHHHHGGGGGCCSCEE--CCS------CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHH-HHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCC
Confidence 223556 7899999999999998 331 1234566788999999999999998 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 257 d~v~i 261 (369)
T 2zc8_A 257 RVFNV 261 (369)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99877
No 133
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.68 E-value=5.6e-07 Score=89.13 Aligned_cols=121 Identities=13% Similarity=0.176 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..++|+.|. + ..--.+.|++||+++|++ .|.|..|.
T Consensus 203 e~~~~~a~~~~~~Gf~~~KlKvG~---------------------~----~~~d~~~v~avR~a~G~~~~l~vDaN~--- 254 (441)
T 4a35_A 203 DTLKQLCAQALKDGWTRFKVKVGA---------------------D----LQDDMRRCQIIRDMIGPEKTLMMDANQ--- 254 (441)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS---------------------C----HHHHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 566788888889999999998753 1 234578899999999987 67777765
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh---cCCcEEEeCCC-CHHHHHHHHHc
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA---FEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
..+.+++.++++.|++.++.||+ ++. .+.+....+.++++ +++||.+...+ ++.++.++++.
T Consensus 255 ------~~~~~~A~~~~~~L~~~~~~~iE--eP~------~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~ 320 (441)
T 4a35_A 255 ------RWDVPEAVEWMSKLAKFKPLWIE--EPT------SPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQA 320 (441)
T ss_dssp ------CCCHHHHHHHHHHHGGGCCSEEE--CCS------CTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHhhcccCccEEe--CCC------CcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHc
Confidence 33578899999999999999998 442 12344566778887 78999998887 89999999999
Q ss_pred CCCcEEcc
Q 017733 314 NYTDLVAF 321 (367)
Q Consensus 314 G~~D~V~~ 321 (367)
+.+|+|.+
T Consensus 321 ~a~div~~ 328 (441)
T 4a35_A 321 KALQFLQI 328 (441)
T ss_dssp TCCSEECC
T ss_pred CCCCEEEE
Confidence 99999876
No 134
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.61 E-value=7.5e-07 Score=86.92 Aligned_cols=124 Identities=15% Similarity=0.185 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhC-Cc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIG-AE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg-~~-~i~vrls~~~ 236 (367)
+++++.|+.+++.||..++|+.+.. + ..--.+.|++||+++| ++ .|.|..|.
T Consensus 166 e~~~~~a~~~~~~G~~~~KlKvg~~--------------------~----~~~d~~~v~avR~a~gg~~~~L~vDaN~-- 219 (391)
T 4e8g_A 166 DEIARIAAEKVAEGFPRLQIKIGGR--------------------P----VEIDIETVRKVWERIRGTGTRLAVDGNR-- 219 (391)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHcCCcEEEEcCCCC--------------------C----HHHHHHHHHHHHHHhCCCCCeEEEeCCC--
Confidence 4567777888889999999997641 1 2335789999999998 76 57777765
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.++ ||+ ++ ..+....+.+++.+++||++...+ +++++.++++.+.
T Consensus 220 -------~w~~~~A~~~~~~L~~~~i-~iE--eP--------~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a 281 (391)
T 4e8g_A 220 -------SLPSRDALRLSRECPEIPF-VLE--QP--------CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGL 281 (391)
T ss_dssp -------CCCHHHHHHHHHHCTTSCE-EEE--SC--------SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhcCe-EEe--cC--------CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 3357889999999999999 886 44 124566788999999999999888 8999999999999
Q ss_pred CcEEcccHHHH
Q 017733 316 TDLVAFGRLFL 326 (367)
Q Consensus 316 ~D~V~~gR~~l 326 (367)
+|+|.+--..+
T Consensus 282 ~d~v~ik~~~~ 292 (391)
T 4e8g_A 282 CDGFGMKLTRI 292 (391)
T ss_dssp CSEEEEEHHHH
T ss_pred CCEEEeCcccc
Confidence 99998754443
No 135
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=98.60 E-value=1e-06 Score=85.57 Aligned_cols=120 Identities=18% Similarity=0.196 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
+.++.+....+.||..++++.+.+ .+--++.|++||+++|++ .|.|..|.
T Consensus 147 ~~~~~~~~~~~~Gf~~~K~k~g~~-------------------------~~~di~~v~avr~~~g~~~~l~vDaN~---- 197 (378)
T 4hpn_A 147 DNASEMAERRAEGFHACKIKIGFG-------------------------VEEDLRVIAAVREAIGPDMRLMIDANH---- 197 (378)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSC-------------------------HHHHHHHHHHHHHHHTTTSEEEEECTT----
T ss_pred HHHHHHHHHHHhccceecccccCC-------------------------hHHHHHHHHHHHHhcCCcEEEEEecCc----
Confidence 445556666778999999987542 223478899999999987 57776664
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
..+.+++.++++.|++.++.|++ ++- .+.+...++.+++.+++||.+...+ +.+++.++++.+.+|
T Consensus 198 -----~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d 264 (378)
T 4hpn_A 198 -----GYTVTEAITLGDRAAGFGIDWFE--EPV------VPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVD 264 (378)
T ss_dssp -----CCCHHHHHHHHHHHGGGCCSCEE--CCS------CTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCS
T ss_pred -----ccCHHHHHHHHhhhhhcccchhh--cCC------CccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCC
Confidence 34578899999999999999988 442 2234567788999999999998888 899999999999999
Q ss_pred EEcc
Q 017733 318 LVAF 321 (367)
Q Consensus 318 ~V~~ 321 (367)
+|.+
T Consensus 265 ~i~~ 268 (378)
T 4hpn_A 265 ILQP 268 (378)
T ss_dssp EECC
T ss_pred EEee
Confidence 9854
No 136
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.59 E-value=5.2e-07 Score=87.87 Aligned_cols=122 Identities=11% Similarity=0.128 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
+.++.|+.+++.||..++|..+.. + .+--.++|++||+++ ++ .|.|+.|.
T Consensus 151 ~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avR~a~-~~~~l~vDan~---- 201 (385)
T 3i6e_A 151 ADIALMERLRADGVGLIKLKTGFR--------------------D----HAFDIMRLELIARDF-PEFRVRVDYNQ---- 201 (385)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHC-TTSEEEEECTT----
T ss_pred HHHHHHHHHHHcCCCEEEEecCCC--------------------C----HHHHHHHHHHHHHhC-CCCeEEEECCC----
Confidence 344566677778999999987541 1 233578999999999 66 68887765
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
..+.+++.++++.|++.+++||+ ++. .+.+...++.+++.+++||++.+.+ +++++.++++.|.+|
T Consensus 202 -----~~~~~~A~~~~~~L~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d 268 (385)
T 3i6e_A 202 -----GLEIDEAVPRVLDVAQFQPDFIE--QPV------RAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICD 268 (385)
T ss_dssp -----CCCGGGHHHHHHHHHTTCCSCEE--CCS------CTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCS
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEE--CCC------CcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCC
Confidence 22456788999999999999987 431 1234567788999999999999988 899999999999999
Q ss_pred EEcccH
Q 017733 318 LVAFGR 323 (367)
Q Consensus 318 ~V~~gR 323 (367)
+|.+--
T Consensus 269 ~v~~k~ 274 (385)
T 3i6e_A 269 GVSIKI 274 (385)
T ss_dssp EEEECH
T ss_pred EEEecc
Confidence 987643
No 137
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=98.58 E-value=3.1e-07 Score=89.60 Aligned_cols=122 Identities=15% Similarity=0.174 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
++++.++.+++.||.+++++.+. .+. .--.+.|++||+++|++ .|.|..|.
T Consensus 167 ~~~~~~~~~~~~G~~~~Kikvg~--------------------~~~----~~d~~~v~avR~~~G~~~~l~vDaN~---- 218 (388)
T 4h83_A 167 SIADEMHNYQELGLAGVKFKVGG--------------------LSA----AEDAARITAAREAAGDDFIICIDANQ---- 218 (388)
T ss_dssp SHHHHHHHHHHHTBSEEEEECSS--------------------SCH----HHHHHHHHHHHHHHCSSSEEEEECTT----
T ss_pred HHHHHHHHHHHcCCceEeecCCC--------------------CCH----HHHHHHHHHHHHhcCCCeEEEEecCc----
Confidence 34667788889999999998643 111 22367899999999987 57776665
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
..+.+++.++++.|++.++.|++ ++- .........+.+++.+++||.+...+ +++++.++++.|.+|
T Consensus 219 -----~~~~~~A~~~~~~l~~~~~~~iE--eP~-----~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d 286 (388)
T 4h83_A 219 -----GYKPAVAVDLSRRIADLNIRWFE--EPV-----EWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAID 286 (388)
T ss_dssp -----CBCHHHHHHHHHHTTTSCCCCEE--SCB-----CSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCS
T ss_pred -----CCCHHHHHHHHHHhhhcCcceee--cCc-----ccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCC
Confidence 33578899999999999999988 431 11123456788999999999998888 899999999999999
Q ss_pred EEcc
Q 017733 318 LVAF 321 (367)
Q Consensus 318 ~V~~ 321 (367)
+|.+
T Consensus 287 ~i~~ 290 (388)
T 4h83_A 287 VCNF 290 (388)
T ss_dssp EECC
T ss_pred eEee
Confidence 9853
No 138
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=98.57 E-value=1.1e-06 Score=85.99 Aligned_cols=123 Identities=15% Similarity=0.201 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++. ||..++|..|. + ..--.++|++||+++ ++ .|.|+.|.
T Consensus 170 e~~~~~a~~~~~~~G~~~~K~KvG~---------------------~----~~~d~~~v~avR~~~-~~~~l~vDaN~-- 221 (398)
T 4dye_A 170 KAMAEHAVRVVEEGGFDAVKLKGTT---------------------D----CAGDVAILRAVREAL-PGVNLRVDPNA-- 221 (398)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCS---------------------C----HHHHHHHHHHHHHHC-TTSEEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCC---------------------C----HHHHHHHHHHHHHhC-CCCeEEeeCCC--
Confidence 5677788888888 99999998752 1 223478999999999 66 67777665
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.+++||+ ++ .. +....+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 222 -------~w~~~~A~~~~~~l~~~~i~~iE--qP-----~~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 284 (398)
T 4dye_A 222 -------AWSVPDSVRAGIALEELDLEYLE--DP-----CV---GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNA 284 (398)
T ss_dssp -------CSCHHHHHHHHHHHGGGCCSEEE--CC-----SS---HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhcCCCEEc--CC-----CC---CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCC
Confidence 33578899999999999999998 33 11 4566788999999999998888 8999999999999
Q ss_pred CcEEcccHHHH
Q 017733 316 TDLVAFGRLFL 326 (367)
Q Consensus 316 ~D~V~~gR~~l 326 (367)
+|+|.+--..+
T Consensus 285 ~d~v~~k~~~~ 295 (398)
T 4dye_A 285 VDVIHGDVYKW 295 (398)
T ss_dssp CSEEEECHHHH
T ss_pred CCEEEeCcccc
Confidence 99998654433
No 139
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.56 E-value=6.7e-07 Score=81.35 Aligned_cols=86 Identities=15% Similarity=0.015 Sum_probs=65.1
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc---CCCcEEcccHHH
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA---NYTDLVAFGRLF 325 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~---G~~D~V~~gR~~ 325 (367)
..++++.+++.|++.|-++......... ......++++++.+++||+++||+ +++++.++++. | +|.|++||++
T Consensus 148 ~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~G-adgv~vG~al 225 (244)
T 1vzw_A 148 LYETLDRLNKEGCARYVVTDIAKDGTLQ-GPNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAG-VEGAIVGKAL 225 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEEEC--------CCCHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGT-EEEEEECHHH
T ss_pred HHHHHHHHHhCCCCEEEEeccCcccccC-CCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCC-CceeeeeHHH
Confidence 3457778888999988776543222111 235677888999999999999999 68999999998 7 9999999999
Q ss_pred HhCCchHHHHHh
Q 017733 326 LANPDLPKRFEL 337 (367)
Q Consensus 326 ladP~l~~k~~~ 337 (367)
+.+|+-+.++++
T Consensus 226 ~~~~~~~~~~~~ 237 (244)
T 1vzw_A 226 YAKAFTLEEALE 237 (244)
T ss_dssp HTTSSCHHHHHH
T ss_pred HcCCCCHHHHHH
Confidence 999966655543
No 140
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.56 E-value=7e-07 Score=86.90 Aligned_cols=119 Identities=12% Similarity=0.173 Sum_probs=91.9
Q ss_pred HHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccC
Q 017733 165 ARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAV 242 (367)
Q Consensus 165 A~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~ 242 (367)
+++..+ .||..++|..+.. + ..--.++|++||+++|++ .|.|..|.
T Consensus 156 ~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~-------- 203 (382)
T 3dgb_A 156 AQKMLDLRRHRIFKLKIGAG--------------------E----VDRDLAHVIAIKKALGDSASVRVDVNQ-------- 203 (382)
T ss_dssp HHHHHHTTSCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHGGGSEEEEECTT--------
T ss_pred HHHHHHhCCCCEEEEeeCCC--------------------C----HHHHHHHHHHHHHHcCCCCeEEEeCCC--------
Confidence 344444 6999999987641 1 233478999999999976 67776664
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
..+.+++..+++.|++.++.||+ ++. .+.+....+.+++.+++||++.+.+ +++++.++++.+.+|+|.+
T Consensus 204 -~~~~~~A~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~ 274 (382)
T 3dgb_A 204 -AWDEAVALRACRILGGNGIDLIE--QPI------SRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFAL 274 (382)
T ss_dssp -CBCHHHHHHHHHHHHTTTCCCEE--CCB------CTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEE
T ss_pred -CCCHHHHHHHHHHHhhcCcCeee--CCC------CccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 33578899999999999999987 441 1234566788999999999999988 8999999999999999977
Q ss_pred cHH
Q 017733 322 GRL 324 (367)
Q Consensus 322 gR~ 324 (367)
--.
T Consensus 275 k~~ 277 (382)
T 3dgb_A 275 KIA 277 (382)
T ss_dssp CHH
T ss_pred ccc
Confidence 433
No 141
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.55 E-value=8.4e-07 Score=86.46 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..++|+.++. +. .+ ..+--.++|++||+++|++ .|.|+.|.
T Consensus 147 e~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~-~~----~~~~d~~~v~avR~a~G~~~~L~vDaN~--- 203 (386)
T 3fv9_G 147 EAMRAKVARHRAQGFKGHSIKIGAS---------------EA-EG----GPALDAERITACLADRQPGEWYLADANN--- 203 (386)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCC---------------TT-TT----HHHHHHHHHHHHTTTCCTTCEEEEECTT---
T ss_pred HHHHHHHHHHHHCCCCEEEEeccCC---------------CC-CC----CHHHHHHHHHHHHHHcCCCCeEEEECCC---
Confidence 4567778888899999999998751 00 11 2345678999999999987 68887765
Q ss_pred ccccCCCChHHHHHHHHHHh-hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 238 CAEAVDSNPEALGLYMAKAL-NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L-~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.| ++.++ ||+ ++ .. .....+.+++.+++||++.+.+ ++++++++++.|.
T Consensus 204 ------~~~~~~A~~~~~~l~~~~~i-~iE--eP-----~~---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a 266 (386)
T 3fv9_G 204 ------GLTVEHALRMLSLLPPGLDI-VLE--AP-----CA---SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDL 266 (386)
T ss_dssp ------CCCHHHHHHHHHHSCSSCCC-EEE--CC-----CS---SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTC
T ss_pred ------CCCHHHHHHHHHHhhccCCc-EEe--cC-----CC---CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCC
Confidence 33578899999999 77788 887 33 11 3456788999999999999988 8999999999999
Q ss_pred CcEEcccHHH
Q 017733 316 TDLVAFGRLF 325 (367)
Q Consensus 316 ~D~V~~gR~~ 325 (367)
+|+|.+--..
T Consensus 267 ~d~v~~k~~~ 276 (386)
T 3fv9_G 267 CDGVGLKVSK 276 (386)
T ss_dssp CSEEEEEHHH
T ss_pred CCEEEECccc
Confidence 9999774433
No 142
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=98.54 E-value=1.7e-06 Score=85.04 Aligned_cols=121 Identities=14% Similarity=0.170 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
++.++.|+..++.||..+++..+.+ . | -..+.+++||+++|++ .|.|..|.
T Consensus 190 ~~~~~~a~~~~~~G~~~~K~k~g~~------------~--~-----------~~~~~v~~vR~~~g~~~~l~vDaN~--- 241 (412)
T 4h1z_A 190 AKRAELAAAWQAKGFSSFKFASPVA------------D--D-----------GVAKEMEILRERLGPAVRIACDMHW--- 241 (412)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGGC------------T--T-----------CHHHHHHHHHHHHCSSSEEEEECCS---
T ss_pred HHHHHHHHHHHhcCcceeccccccc------------h--h-----------hHHHHHHHHHhccCCeEEEEecccc---
Confidence 3456677778889999999986542 0 1 1356689999999987 56666654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.++.|++ +|- .+.+...++.+++.+++||.+...+ +.+++.++++.+.+
T Consensus 242 ------~~~~~~A~~~~~~l~~~~l~~iE--qP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~ 307 (412)
T 4h1z_A 242 ------AHTASEAVALIKAMEPHGLWFAE--APV------RTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRAL 307 (412)
T ss_dssp ------CCCHHHHHHHHHHHGGGCEEEEE--CCS------CTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCC
T ss_pred ------CCCHHHHHHHHHhhcccccceec--CCC------CccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCC
Confidence 34678899999999999999987 441 2234567888999999999998888 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 308 div~~ 312 (412)
T 4h1z_A 308 AIVQP 312 (412)
T ss_dssp SEECC
T ss_pred CEEEe
Confidence 98853
No 143
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=98.54 E-value=3.7e-07 Score=93.03 Aligned_cols=161 Identities=11% Similarity=0.022 Sum_probs=105.9
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc--ceEEEeC------
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE--RVGMRLS------ 233 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~--~i~vrls------ 233 (367)
.+.|+.+.++|+|.|-|.+++-.=..+++ .|.+ | +. ..+.++++.++.|.. .+++...
T Consensus 350 ~~~a~~~l~aGad~V~igt~~~~~~~~~~-----~~~~--~---~~----~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~ 415 (555)
T 1jvn_A 350 LEVASLYFRSGADKVSIGTDAVYAAEKYY-----ELGN--R---GD----GTSPIETISKAYGAQAVVISVDPKRVYVNS 415 (555)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHHHHHH-----HTTS--C---CC----SCSHHHHHHHHHCGGGEEEEECEEEEEESS
T ss_pred HHHHHHHHHcCCCEEEECCHHhhCchhhc-----cccc--c---cc----CHHHHHHHHHHhCCCcEEEEEEcccccccc
Confidence 56778888999999999987611011111 1111 0 11 145677777777754 3444332
Q ss_pred CC--------------cc-----cc--ccCCCC-hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh
Q 017733 234 PY--------------AE-----CA--EAVDSN-PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA 291 (367)
Q Consensus 234 ~~--------------~~-----~~--~~~~~~-~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~ 291 (367)
+. +. |. -.+|.. +...+.++++.++++|++.|-++..+....... .+.+.++.+++.
T Consensus 416 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~ 494 (555)
T 1jvn_A 416 QADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDA 494 (555)
T ss_dssp GGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHH
T ss_pred ccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHh
Confidence 00 00 00 001111 111245789999999999998876554443333 367889999999
Q ss_pred cCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 292 FEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 292 ~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
+++|||++||+ +++++.++++...+|.|++||+++.+|....++++
T Consensus 495 ~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 495 VKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp CSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHH
T ss_pred CCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHH
Confidence 99999999999 89999999984349999999999999987777653
No 144
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.52 E-value=7.3e-07 Score=78.88 Aligned_cols=125 Identities=14% Similarity=0.074 Sum_probs=83.8
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECA 239 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~ 239 (367)
+.+-++.+.++|++.|++|... . ...+.++++|+.++++ .|++-...
T Consensus 24 ~~~~~~~~~~~G~~~iev~~~~----------------~-----------~~~~~i~~ir~~~~~~~~ig~~~v~----- 71 (205)
T 1wa3_A 24 AKEKALAVFEGGVHLIEITFTV----------------P-----------DADTVIKELSFLKEKGAIIGAGTVT----- 71 (205)
T ss_dssp HHHHHHHHHHTTCCEEEEETTS----------------T-----------THHHHHHHTHHHHHTTCEEEEESCC-----
T ss_pred HHHHHHHHHHCCCCEEEEeCCC----------------h-----------hHHHHHHHHHHHCCCCcEEEecccC-----
Confidence 4455677778999999998532 1 1256789999988643 44442111
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc--------------------cc---------------CCc-hhhHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI--------------------QL---------------TDK-SETQR 283 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~--------------------~~---------------~~~-~~~~~ 283 (367)
+.++ ++...+.|+||+ ++.. +. .. .+. .....
T Consensus 72 ------~~~~----~~~a~~~Gad~i-v~~~-~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~ 139 (205)
T 1wa3_A 72 ------SVEQ----CRKAVESGAEFI-VSPH-LDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQ 139 (205)
T ss_dssp ------SHHH----HHHHHHHTCSEE-ECSS-CCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHH
T ss_pred ------CHHH----HHHHHHcCCCEE-EcCC-CCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHH
Confidence 2332 234445788888 6432 22 00 000 11234
Q ss_pred HHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCch
Q 017733 284 SLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 284 ~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l 331 (367)
.++.+++.+ ++||++.||++++++.++++.| +|.|.+|+.++. ++|
T Consensus 140 ~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~G-a~~v~vGs~i~~-~d~ 186 (205)
T 1wa3_A 140 FVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAG-VLAVGVGSALVK-GTP 186 (205)
T ss_dssp HHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHT-CSCEEECHHHHC-SCH
T ss_pred HHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCC-CCEEEECccccC-CCH
Confidence 566777777 7899999999999999999999 999999999998 774
No 145
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.50 E-value=2.2e-06 Score=82.86 Aligned_cols=122 Identities=9% Similarity=0.090 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+++++.|+.+++.||..++|..+.. + .+--.+.|++||+++|+..|.|..|.
T Consensus 145 e~~~~~a~~~~~~G~~~iK~Kvg~~--------------------~----~~~d~~~v~avr~~~~~~~l~vDaN~---- 196 (365)
T 3ik4_A 145 VHAAASAKAILARGIKSIKVKTAGV--------------------D----VAYDLARLRAIHQAAPTAPLIVDGNC---- 196 (365)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCSS--------------------C----HHHHHHHHHHHHHHSSSCCEEEECTT----
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCCC--------------------C----HHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 4567777888889999999997641 1 33458899999999964355555543
Q ss_pred cccCCCChHHHHHHHHHHh--hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 239 AEAVDSNPEALGLYMAKAL--NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L--~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.| ++.++.||+ ++. .+.+....+.+++.+++||.+...+ +++++.++++.+.
T Consensus 197 -----~~~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a 263 (365)
T 3ik4_A 197 -----GYDVERALAFCAACKAESIPMVLFE--QPL------PREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGT 263 (365)
T ss_dssp -----CCCHHHHHHHHHHHHHTTCCEEEEE--CCS------CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCceEEE--CCC------CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCC
Confidence 33578899999999 888899988 441 1234566788999999999998888 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 264 ~d~v~i 269 (365)
T 3ik4_A 264 ASVINI 269 (365)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 999854
No 146
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.50 E-value=1.4e-06 Score=84.67 Aligned_cols=122 Identities=12% Similarity=0.194 Sum_probs=90.4
Q ss_pred HHHHH-HhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccC
Q 017733 165 ARNAI-EAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAV 242 (367)
Q Consensus 165 A~~a~-~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~ 242 (367)
++... +.||..++|..+.. + .+--.+.|++||+++|++ .|.|..|.
T Consensus 155 ~~~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avR~a~g~~~~l~vDaN~-------- 202 (381)
T 3fcp_A 155 GEKLLAEGRHRAFKLKIGAR--------------------E----LATDLRHTRAIVEALGDRASIRVDVNQ-------- 202 (381)
T ss_dssp HHHHTC----CEEEEECCSS--------------------C----HHHHHHHHHHHHHHTCTTCEEEEECTT--------
T ss_pred HHHHHHhCCCCEEEEecCCC--------------------C----hHHHHHHHHHHHHHcCCCCeEEEECCC--------
Confidence 33444 46999999987641 1 234578999999999976 57777665
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
..+.+++.++++.|++.++.||+ ++. .+.+....+.+++.+++||++...+ +++++.++++.+.+|+|.+
T Consensus 203 -~~~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~ 273 (381)
T 3fcp_A 203 -AWDAATGAKGCRELAAMGVDLIE--QPV------SAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYAL 273 (381)
T ss_dssp -CBCHHHHHHHHHHHHHTTCSEEE--CCB------CTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred -CCCHHHHHHHHHHHhhcCcccee--CCC------CcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 33578899999999999999987 441 1234566788999999999998888 8999999999999999987
Q ss_pred cHHHHh
Q 017733 322 GRLFLA 327 (367)
Q Consensus 322 gR~~la 327 (367)
--..+-
T Consensus 274 k~~~~G 279 (381)
T 3fcp_A 274 KIAKAG 279 (381)
T ss_dssp CHHHHT
T ss_pred cccccC
Confidence 544443
No 147
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=98.49 E-value=2.3e-06 Score=83.48 Aligned_cols=122 Identities=13% Similarity=0.080 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+++++.|+.+++.||..++|..+.. + .+--.+.|++||+++|+..|.|..|.
T Consensus 146 e~~~~~a~~~~~~G~~~iKlKvg~~-----------~-------------~~~d~~~v~avR~~~~~~~L~vDaN~---- 197 (389)
T 3s5s_A 146 ERAEEAARRAAAMGFRALKVKVGGR-----------L-------------AASDPARIEAIHAAAPGASLILDGNG---- 197 (389)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCGG-----------G-------------TTTHHHHHHHHHHHCTTCEEEEECTT----
T ss_pred HHHHHHHHHHHHcCCCeEEEEecCC-----------C-------------hHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 4567777888889999999997642 0 12247889999999974345555443
Q ss_pred cccCCCChHHHHHHHHHHh--hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 239 AEAVDSNPEALGLYMAKAL--NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L--~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.| ++.++.||+ ++. .+.+....+.+++.+++||.+...+ ++.++.++++.+.
T Consensus 198 -----~w~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a 264 (389)
T 3s5s_A 198 -----GLTAGEALALVAHARRLGADVALLE--QPV------PRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERA 264 (389)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCEEEEEE--CCS------CTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCeEEEE--CCC------CcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCC
Confidence 34578899999999 778888887 442 1234566788999999999998888 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 265 ~d~v~~ 270 (389)
T 3s5s_A 265 ATVVNI 270 (389)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999854
No 148
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.48 E-value=1.4e-06 Score=83.64 Aligned_cols=125 Identities=17% Similarity=0.169 Sum_probs=84.1
Q ss_pred HHHHHh--CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 166 RNAIEA--GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 166 ~~a~~a--GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
..+.++ |+|.|+++..+| ....+.+.|+++|+.++..+|.++.-.
T Consensus 124 ~~l~~~~~g~~~i~i~~~~g------------------------~~~~~~~~i~~lr~~~~~~~vi~g~v~--------- 170 (351)
T 2c6q_A 124 EQILEAIPQVKYICLDVANG------------------------YSEHFVEFVKDVRKRFPQHTIMAGNVV--------- 170 (351)
T ss_dssp HHHHHHCTTCCEEEEECSCT------------------------TBHHHHHHHHHHHHHCTTSEEEEEEEC---------
T ss_pred HHHHhccCCCCEEEEEecCC------------------------CcHHHHHHHHHHHHhcCCCeEEEEeCC---------
Confidence 334455 999999987653 023578999999999854466654322
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCc--cc----cCCchhhHHHHHHH---HHhcCCcEEEeCCC-CHHHHHHHHHc
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRM--IQ----LTDKSETQRSLLSM---RRAFEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~--~~----~~~~~~~~~~~~~i---r~~~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
+.+ .++.+.++|+|+|.++.+.- .. .....+....+..+ .+..++|||+.||+ ++.++.++|+.
T Consensus 171 --t~e----~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal 244 (351)
T 2c6q_A 171 --TGE----MVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA 244 (351)
T ss_dssp --SHH----HHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT
T ss_pred --CHH----HHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc
Confidence 233 45567789999998864311 00 00011223333333 33357999999999 89999999999
Q ss_pred CCCcEEcccHHHHhCCc
Q 017733 314 NYTDLVAFGRLFLANPD 330 (367)
Q Consensus 314 G~~D~V~~gR~~ladP~ 330 (367)
| +|+|++||+++.-++
T Consensus 245 G-A~~V~vG~~fl~~~E 260 (351)
T 2c6q_A 245 G-ADFVMLGGMLAGHSE 260 (351)
T ss_dssp T-CSEEEESTTTTTBTT
T ss_pred C-CCceeccHHHhcCcc
Confidence 9 999999999987543
No 149
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.46 E-value=1.7e-06 Score=78.28 Aligned_cols=128 Identities=12% Similarity=0.020 Sum_probs=87.7
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
+.+..+.++|.|.|-+.+++. + |+..+.++++.+|+. | -.+++..+
T Consensus 92 ~~i~~~~~aGad~I~l~~~~~------~-----------------~p~~l~~~i~~~~~~-g-~~v~~~v~--------- 137 (229)
T 3q58_A 92 QDVDALAQAGADIIAFDASFR------S-----------------RPVDIDSLLTRIRLH-G-LLAMADCS--------- 137 (229)
T ss_dssp HHHHHHHHHTCSEEEEECCSS------C-----------------CSSCHHHHHHHHHHT-T-CEEEEECS---------
T ss_pred HHHHHHHHcCCCEEEECcccc------C-----------------ChHHHHHHHHHHHHC-C-CEEEEecC---------
Confidence 345567889999999887652 0 123567888888874 2 24555333
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCcccc-CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEc
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 320 (367)
+.+ .++.+++.|+|+|-+....+... ....+....++.+++. ++|||+.||+ |++++.++++.| +|.|+
T Consensus 138 ---t~e----ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~ 208 (229)
T 3q58_A 138 ---TVN----EGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAIEHG-AWAVT 208 (229)
T ss_dssp ---SHH----HHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHHHTT-CSEEE
T ss_pred ---CHH----HHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHHHcC-CCEEE
Confidence 233 34567789999996433222111 1223355778888887 8999999999 899999999998 99999
Q ss_pred ccHHHHhCCchHHH
Q 017733 321 FGRLFLANPDLPKR 334 (367)
Q Consensus 321 ~gR~~ladP~l~~k 334 (367)
+|.+++ +|+.+.+
T Consensus 209 VGsai~-~p~~~~~ 221 (229)
T 3q58_A 209 VGSAIT-RIEHICQ 221 (229)
T ss_dssp ECHHHH-CHHHHHH
T ss_pred EchHhc-ChHHHHH
Confidence 997776 5654433
No 150
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.45 E-value=1.9e-06 Score=78.63 Aligned_cols=84 Identities=12% Similarity=-0.035 Sum_probs=64.9
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.+.++.+++.|++.+-++.......... ...+.++.+++.+++||+++||+ +++++.++++.| +|.|++|++++..|
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vgsal~~~~ 232 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEG-YDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAG-AEAALAASVFHFGE 232 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSC-CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTS
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCC-CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCC-CHHHHHHHHHHcCC
Confidence 4567778888999877764332222222 24678889999999999999999 699999999877 99999999999999
Q ss_pred chHHHHH
Q 017733 330 DLPKRFE 336 (367)
Q Consensus 330 ~l~~k~~ 336 (367)
+-+.+++
T Consensus 233 ~~~~~~~ 239 (252)
T 1ka9_F 233 IPIPKLK 239 (252)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 5555544
No 151
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.44 E-value=7.9e-07 Score=89.67 Aligned_cols=130 Identities=17% Similarity=0.127 Sum_probs=90.0
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE-EeCCCcccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-RLSPYAECA 239 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-rls~~~~~~ 239 (367)
..+.+..+.++|+|.|.|+.+||+ ..-+.+.|+++|+..+..+|.+ .+.
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g~------------------------~~~v~~~i~~i~~~~~~~~vi~g~v~------ 306 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHGH------------------------SQGVIDKVKEVRAKYPSLNIIAGNVA------ 306 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCTT------------------------SHHHHHHHHHHHHHCTTSEEEEEEEC------
T ss_pred hHHHHHHHHhhccceEEecccccc------------------------hhhhhhHHHHHHHhCCCceEEeeeec------
Confidence 355667778999999999988741 2347889999999986445543 221
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc---c---cCCchhhHHHHHHH---HHhcCCcEEEeCCC-CHHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI---Q---LTDKSETQRSLLSM---RRAFEGTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~---~---~~~~~~~~~~~~~i---r~~~~~pvi~~Ggi-t~~~a~~ 309 (367)
+.+ .++.+.++|+|+|.+..+.-. . .....+....+..+ .+.+++|||+.||+ ++.++.+
T Consensus 307 ------t~e----~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~k 376 (511)
T 3usb_A 307 ------TAE----ATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVK 376 (511)
T ss_dssp ------SHH----HHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHH
T ss_pred ------cHH----HHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHH
Confidence 233 466778899999987322111 0 01112233444444 33457999999999 8999999
Q ss_pred HHHcCCCcEEcccHHHHhCCch
Q 017733 310 AVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l 331 (367)
+|+.| +|.|++||+|+.-.+-
T Consensus 377 ala~G-A~~V~vGs~~~~~~es 397 (511)
T 3usb_A 377 ALAAG-AHVVMLGSMFAGVAES 397 (511)
T ss_dssp HHHTT-CSEEEESTTTTTBTTS
T ss_pred HHHhC-chhheecHHHhcCccC
Confidence 99999 9999999998776653
No 152
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=98.43 E-value=1.7e-06 Score=84.35 Aligned_cols=132 Identities=17% Similarity=0.128 Sum_probs=90.1
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
.+.++.+.++|.|.|.|..+||+ ...+.++|+++|+.++ .+|.+.--.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~------------------------~~~~~e~I~~ik~~~~-i~Vi~g~V~------- 193 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGH------------------------SLNIIRTLKEIKSKMN-IDVIVGNVV------- 193 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCS------------------------BHHHHHHHHHHHTTCC-CEEEEEEEC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCC------------------------cccHHHHHHHHHhcCC-CeEEEeecC-------
Confidence 34566778899999999877641 2345788999999874 344442111
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecC--C-ccc---cCCchhhHHHHHHHHHh---cCCcEEEeCCC-CHHHHHHHH
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEP--R-MIQ---LTDKSETQRSLLSMRRA---FEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~--~-~~~---~~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t~~~a~~~L 311 (367)
+. +.++.++++|+|+|.+... . ... .....+....+..+++. +++|||+.||+ +++++.++|
T Consensus 194 ----t~----e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kal 265 (400)
T 3ffs_A 194 ----TE----EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL 265 (400)
T ss_dssp ----SH----HHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH
T ss_pred ----CH----HHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHH
Confidence 23 3556678899999988311 0 000 01112344555666654 57899999999 899999999
Q ss_pred HcCCCcEEcccHHHHhCCchHHH
Q 017733 312 AANYTDLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~k 334 (367)
+.| +|.|++|+.|+.-++-+-.
T Consensus 266 alG-Ad~V~vGt~f~~t~Es~~~ 287 (400)
T 3ffs_A 266 AVG-ASSVMIGSILAGTEESPGE 287 (400)
T ss_dssp TTT-CSEEEECGGGTTBTTSSCC
T ss_pred HcC-CCEEEEChHHhcCCCCCch
Confidence 999 9999999999998875433
No 153
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=98.43 E-value=3.2e-06 Score=82.51 Aligned_cols=130 Identities=12% Similarity=0.098 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+++++.|+.+++.||..++|..+.+. + .. ......+--.+.|++||+++|+..|.|..|.
T Consensus 167 e~~~~~a~~~~~~Gf~~iKlKvg~~~-------~----~~-----~~~~~~~~di~~v~avR~a~~d~~L~vDaN~---- 226 (393)
T 3u9i_A 167 TAAARAAQAIVARGVTTIKIKIGAGD-------P----DA-----TTIRTMEHDLARIVAIRDVAPTARLILDGNC---- 226 (393)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECC-----------------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCS----
T ss_pred HHHHHHHHHHHHcCCCeEEEEeCCCc-------c----cc-----cccccHHHHHHHHHHHHHHCCCCeEEEEccC----
Confidence 56677788888899999999987531 0 00 0112355668899999999974345555554
Q ss_pred cccCCCChHHHHHHHHHHh--hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 239 AEAVDSNPEALGLYMAKAL--NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L--~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.| ++.++.||+ +|. .+.+....+.+++.+++||.+...+ +++++.++++.+.
T Consensus 227 -----~w~~~~A~~~~~~L~~~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 293 (393)
T 3u9i_A 227 -----GYTAPDALRLLDMLGVHGIVPALFE--QPV------AKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAA 293 (393)
T ss_dssp -----CCCHHHHHHHHHTTTTTTCCCSEEE--CCS------CTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHHHhhCCCCeEEEE--CCC------CCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCC
Confidence 34578899999999 888899988 442 1223456778999999999998888 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 294 ~d~i~~ 299 (393)
T 3u9i_A 294 VDVLNI 299 (393)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999854
No 154
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.42 E-value=1.6e-06 Score=79.14 Aligned_cols=82 Identities=12% Similarity=-0.056 Sum_probs=62.9
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.++++.+++.|++.+-++.......... ...+.++.+++.+++||+++||+ +++++.++++.| +|.|++|++++..|
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g-~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~G-adgv~vGsal~~~~ 231 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFRE 231 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSC-CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTC
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCC-CCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-ChHHHHHHHHHcCC
Confidence 4567778889999887764332222222 24677888999889999999999 689999999887 99999999999998
Q ss_pred chHHH
Q 017733 330 DLPKR 334 (367)
Q Consensus 330 ~l~~k 334 (367)
+-+.+
T Consensus 232 ~~~~~ 236 (253)
T 1thf_D 232 IDVRE 236 (253)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 33333
No 155
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.42 E-value=2.5e-06 Score=77.23 Aligned_cols=126 Identities=13% Similarity=0.027 Sum_probs=87.1
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
+.+..+.++|.|.|-+.+++. + ++..+.++++.+|+. | -.+++..+
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~------~-----------------~p~~l~~~i~~~~~~-g-~~v~~~v~--------- 137 (232)
T 3igs_A 92 DDVDALAQAGAAIIAVDGTAR------Q-----------------RPVAVEALLARIHHH-H-LLTMADCS--------- 137 (232)
T ss_dssp HHHHHHHHHTCSEEEEECCSS------C-----------------CSSCHHHHHHHHHHT-T-CEEEEECC---------
T ss_pred HHHHHHHHcCCCEEEECcccc------C-----------------CHHHHHHHHHHHHHC-C-CEEEEeCC---------
Confidence 345567889999999887652 0 123567888888874 2 24555332
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCcccc-CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEc
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 320 (367)
+.+ .++.+++.|+|+|-+....+... ....+....++.+++. ++|||+.||+ |++++.++++.| +|.|+
T Consensus 138 ---t~e----ea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~~~G-adgV~ 208 (232)
T 3igs_A 138 ---SVD----DGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAIRYG-AWAVT 208 (232)
T ss_dssp ---SHH----HHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHHHTT-CSEEE
T ss_pred ---CHH----HHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHcC-CCEEE
Confidence 233 44567789999996433222111 1123355778888888 9999999999 899999999998 99999
Q ss_pred ccHHHHhCCchH
Q 017733 321 FGRLFLANPDLP 332 (367)
Q Consensus 321 ~gR~~ladP~l~ 332 (367)
+|.+++ +|+.+
T Consensus 209 VGsal~-~p~~~ 219 (232)
T 3igs_A 209 VGSAIT-RLEHI 219 (232)
T ss_dssp ECHHHH-CHHHH
T ss_pred EehHhc-CHHHH
Confidence 997776 57543
No 156
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.42 E-value=6.5e-07 Score=81.73 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=72.8
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
+..++++.+++.|+|+|+++...... .........++.+++.+++||+++|++ ++++++++++.| +|.|.+++.++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~ 109 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISATH-EERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSG-ADKVSVNSAAVR 109 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCSST-TCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHT-CSEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCccc-cCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 35678889999999999998654321 122334566888999999999999999 799999999999 999999999999
Q ss_pred CCchHHHHHhC
Q 017733 328 NPDLPKRFELN 338 (367)
Q Consensus 328 dP~l~~k~~~g 338 (367)
||+++.++.+.
T Consensus 110 ~p~~~~~~~~~ 120 (252)
T 1ka9_F 110 RPELIRELADH 120 (252)
T ss_dssp CTHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999998765
No 157
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.42 E-value=7.5e-07 Score=81.35 Aligned_cols=87 Identities=11% Similarity=0.170 Sum_probs=71.6
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..++++.+++.|+|+++++...... .........++.+++.+++||+++|++ ++++++++++.| +|.|.+++.++.+
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~G-ad~V~lg~~~l~~ 109 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITASV-EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRG-ADKVSINTAAVEN 109 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSCSS-SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEECCchhh-cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcC-CCEEEEChHHHhC
Confidence 4568889999999999998654221 122334566788999899999999999 899999999999 9999999999999
Q ss_pred CchHHHHHhC
Q 017733 329 PDLPKRFELN 338 (367)
Q Consensus 329 P~l~~k~~~g 338 (367)
|+++.++.+.
T Consensus 110 p~~~~~~~~~ 119 (253)
T 1thf_D 110 PSLITQIAQT 119 (253)
T ss_dssp THHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9998888754
No 158
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.41 E-value=2.2e-06 Score=76.09 Aligned_cols=129 Identities=17% Similarity=0.149 Sum_probs=88.3
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe-CCCccccccCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL-SPYAECAEAVD 243 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl-s~~~~~~~~~~ 243 (367)
++.+.++|.|+|-+|...+ + .-+.++++.+|+. | ..+.+-+ ++
T Consensus 70 ~~~~~~~Gad~v~v~~~~~----------------------~---~~~~~~~~~~~~~-g-~~~~v~~~~~--------- 113 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTD----------------------V---LTIQSCIRAAKEA-G-KQVVVDMICV--------- 113 (211)
T ss_dssp HHHHHHTTCSEEEEETTSC----------------------H---HHHHHHHHHHHHH-T-CEEEEECTTC---------
T ss_pred HHHHHhcCCCEEEEeCCCC----------------------h---hHHHHHHHHHHHc-C-CeEEEEecCC---------
Confidence 6677889999999986421 0 2345677777765 3 2344432 22
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
.++ .+.++.+.+.|+|+|.+..+...... .+.....++.+++.+ +.|+++.||++++++.++++.| +|.|.+|
T Consensus 114 ~t~----~~~~~~~~~~g~d~i~v~~g~~g~~~-~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~G-ad~vvvG 187 (211)
T 3f4w_A 114 DDL----PARVRLLEEAGADMLAVHTGTDQQAA-GRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLG-PDVVIVG 187 (211)
T ss_dssp SSH----HHHHHHHHHHTCCEEEEECCHHHHHT-TCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTC-CSEEEEC
T ss_pred CCH----HHHHHHHHHcCCCEEEEcCCCccccc-CCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcC-CCEEEEC
Confidence 112 23556677889999987633211111 112346778899886 7899999999999999999998 9999999
Q ss_pred HHHHhCCchHHHH
Q 017733 323 RLFLANPDLPKRF 335 (367)
Q Consensus 323 R~~ladP~l~~k~ 335 (367)
|+++..++....+
T Consensus 188 sai~~~~d~~~~~ 200 (211)
T 3f4w_A 188 SAITHAADPAGEA 200 (211)
T ss_dssp HHHHTCSSHHHHH
T ss_pred HHHcCCCCHHHHH
Confidence 9999888764443
No 159
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.41 E-value=2.6e-06 Score=77.14 Aligned_cols=84 Identities=15% Similarity=0.023 Sum_probs=64.1
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.++++.+.+.|+|+|-++......... ......++.+++.+++||+++||+ +++++.++++.| +|.|++|++++..+
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~G-a~~v~vgsal~~~~ 234 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGL-GYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAG-ADAVLAASLFHFRV 234 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCS-CCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEESHHHHTTS
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcC-cCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcC-CcHHHHHHHHHcCC
Confidence 356777888999999876543322111 124567888888889999999999 589999999888 99999999999987
Q ss_pred chHHHHH
Q 017733 330 DLPKRFE 336 (367)
Q Consensus 330 ~l~~k~~ 336 (367)
+-..+++
T Consensus 235 ~~~~~~~ 241 (253)
T 1h5y_A 235 LSIAQVK 241 (253)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 5444443
No 160
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.40 E-value=1.8e-06 Score=78.36 Aligned_cols=86 Identities=19% Similarity=0.107 Sum_probs=67.3
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHc-----CCCcEEcccHH
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAA-----NYTDLVAFGRL 324 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~-----G~~D~V~~gR~ 324 (367)
.++++.+++.|+++|-++.......... .+...++.+++.+++||+++||+ +++++.++++. |.+|.|++||+
T Consensus 147 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsa 225 (241)
T 1qo2_A 147 VSLLKRLKEYGLEEIVHTEIEKDGTLQE-HDFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRA 225 (241)
T ss_dssp HHHHHHHHTTTCCEEEEEETTHHHHTCC-CCHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHH
T ss_pred HHHHHHHHhCCCCEEEEEeecccccCCc-CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHH
Confidence 4577788889999888776543222222 25678889999999999999999 79999999987 43999999999
Q ss_pred HHhCCchHHHHHh
Q 017733 325 FLANPDLPKRFEL 337 (367)
Q Consensus 325 ~ladP~l~~k~~~ 337 (367)
++..+.-+..+++
T Consensus 226 l~~~~~~~~~~~~ 238 (241)
T 1qo2_A 226 FLEGILTVEVMKR 238 (241)
T ss_dssp HHTTSSCHHHHHH
T ss_pred HHcCCCCHHHHHH
Confidence 9999876666543
No 161
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=98.40 E-value=5.2e-06 Score=79.19 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
++++.|+.+++.||..++|..+.. + .+--.+.|++||+++|++ .|.|..|.
T Consensus 119 ~~~~~a~~~~~~G~~~~KiKvg~~--------------------~----~~~d~~~v~avr~~~g~~~~L~vDaN~---- 170 (332)
T 2ozt_A 119 AALEQWQQSWQRGQTTFKWKVGVM--------------------S----PEEEQAILKALLAALPPGAKLRLDANG---- 170 (332)
T ss_dssp GHHHHHHHHHHTTCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHSCTTCEEEEECTT----
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCC--------------------C----hHHHHHHHHHHHHHcCCCCEEEEcccC----
Confidence 456677777889999999986520 1 234478899999999976 46665543
Q ss_pred cccCCCChHHHHHHHHHHhhhc---CccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 239 AEAVDSNPEALGLYMAKALNKF---KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~---Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++. ++.||+ +|- .+.+....+.+++.+++||++...+ ++.++.++++.|
T Consensus 171 -----~~~~~~A~~~~~~l~~~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~ 237 (332)
T 2ozt_A 171 -----SWDRATANRWFAWLDRHGNGKIEYVE--QPL------PPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRG 237 (332)
T ss_dssp -----CCCHHHHHHHHHHHHHHCCTTEEEEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTT
T ss_pred -----CCCHHHHHHHHHHHHhhccCCcceeE--CCC------CCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC
Confidence 33578899999999998 899887 442 1234566778999999999998887 899999999999
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
.+|++.+
T Consensus 238 a~~~i~i 244 (332)
T 2ozt_A 238 WPGFFVI 244 (332)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 9997654
No 162
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=98.38 E-value=2.7e-06 Score=82.26 Aligned_cols=122 Identities=11% Similarity=0.116 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+.+.+.++.+.+.||..+++..+.. + ..--.+.++++|+++|++ .|.|..|.
T Consensus 145 ~~~~~~~~~~~~~g~~~~K~Kvg~~--------------------~----~~~d~~~v~avr~~~g~~~~l~vDaN~--- 197 (370)
T 2chr_A 145 RDLDSAVEMIERRRHNRFKVKLGFR--------------------S----PQDDLIHMEALSNSLGSKAYLRVDVNQ--- 197 (370)
T ss_dssp HHHHHHHHHHHTTSCCEEEEECSSS--------------------C----HHHHHHHHHHHHHHTTTTSEEEEECTT---
T ss_pred hhHHHHHHHHhhcccceeecccccC--------------------C----hHHHHHHHHHHHHhcCCCcEEEecCCC---
Confidence 3456677777889999999987541 1 223467899999999987 47776664
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++..+++.|++.++.|++ ++- .+.+...++.+++.+++||.+...+ +.+++.++++.+.+
T Consensus 198 ------~~~~~~A~~~~~~l~~~~~~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~ 263 (370)
T 2chr_A 198 ------AWDEQVASVYIPELEALGVELIE--QPV------GRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSV 263 (370)
T ss_dssp ------CCCTHHHHHHHHHHHTTTCCEEE--CCS------CSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCC
T ss_pred ------CCCHHHHHHHHHHHHhcCCceec--CCC------ChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCC
Confidence 23567899999999999999988 442 1234567888999999999998887 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 264 d~i~~ 268 (370)
T 2chr_A 264 DVFSL 268 (370)
T ss_dssp SEECC
T ss_pred cEEEe
Confidence 98864
No 163
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.36 E-value=1.4e-06 Score=79.09 Aligned_cols=88 Identities=15% Similarity=0.136 Sum_probs=72.1
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
+..++++.+++.|+|+++++...... .........++.+++.+++||+++|++ ++++++++++.| +|+|.+++.++.
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~G-ad~V~i~~~~~~ 111 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAG-ADKVSVNTAAVR 111 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHT-CSEEEESHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 35678889999999999998654321 122234567888999999999999999 899999999999 999999999999
Q ss_pred CCchHHHHHhC
Q 017733 328 NPDLPKRFELN 338 (367)
Q Consensus 328 dP~l~~k~~~g 338 (367)
||+++.++.+.
T Consensus 112 ~~~~~~~~~~~ 122 (253)
T 1h5y_A 112 NPQLVALLARE 122 (253)
T ss_dssp CTHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 99999887654
No 164
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.36 E-value=3.9e-06 Score=84.20 Aligned_cols=131 Identities=19% Similarity=0.119 Sum_probs=89.4
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
..+.|+.+.++|+|+|.++.++|+ .....+.++++|+.++..++...-
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g~------------------------~~~~~~~i~~l~~~~p~~pvi~G~-------- 281 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHGH------------------------SAGVLRKIAEIRAHFPNRTLIAGN-------- 281 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCTT------------------------CHHHHHHHHHHHHHCSSSCEEEEE--------
T ss_pred HHHHHHHHHHcCCCeEEEeeecCc------------------------chhHHHHHHHHHHHCCCCcEeCCC--------
Confidence 457788889999999999876531 123578899999998533544210
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcc------ccCCchhhHHHHHHHHH---hcCCcEEEeCCC-CHHHHHHH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI------QLTDKSETQRSLLSMRR---AFEGTFIAAGGY-SRDEGNKA 310 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~------~~~~~~~~~~~~~~ir~---~~~~pvi~~Ggi-t~~~a~~~ 310 (367)
-.+. +.+..+.++|+|+|.+..+.-. ......+....+..+.+ ..++|||+.||+ ++.++.++
T Consensus 282 ---v~t~----~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~ka 354 (491)
T 1zfj_A 282 ---IATA----EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKA 354 (491)
T ss_dssp ---ECSH----HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHH
T ss_pred ---ccCH----HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHH
Confidence 1122 3455677899999988532100 00111223444444444 467999999999 89999999
Q ss_pred HHcCCCcEEcccHHHHhCCch
Q 017733 311 VAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l 331 (367)
++.| +|+|++||+++..++-
T Consensus 355 l~~G-A~~v~vG~~~~~~~e~ 374 (491)
T 1zfj_A 355 LAAG-GNAVMLGSMFAGTDEA 374 (491)
T ss_dssp HHTT-CSEEEESTTTTTBSSC
T ss_pred HHcC-CcceeeCHHhhCCCcC
Confidence 9999 9999999999976543
No 165
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.35 E-value=1.2e-05 Score=71.99 Aligned_cols=79 Identities=14% Similarity=0.037 Sum_probs=56.8
Q ss_pred HhhhcCccEEEEecCCccc--cCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 256 ALNKFKLLYLHVIEPRMIQ--LTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 256 ~L~~~Gvd~i~v~~~~~~~--~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
...+.|+||+-+....... +...+.....++.+++.+++||++.||++++++.++++.| +|.|.++++++..++...
T Consensus 125 ~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~ 203 (221)
T 1yad_A 125 QAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGMTPDRLRDVKQAG-ADGIAVMSGIFSSAEPLE 203 (221)
T ss_dssp HHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSCCGGGHHHHHHTT-CSEEEESHHHHTSSSHHH
T ss_pred HHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCCCHHHHHHHHHcC-CCEEEEhHHhhCCCCHHH
Confidence 4456899999774321111 1111234466777888889999999999999999999998 999999999999877443
Q ss_pred HH
Q 017733 334 RF 335 (367)
Q Consensus 334 k~ 335 (367)
++
T Consensus 204 ~~ 205 (221)
T 1yad_A 204 AA 205 (221)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 166
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=98.35 E-value=2.3e-06 Score=84.80 Aligned_cols=118 Identities=11% Similarity=0.181 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHh-CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEA-GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~a-GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++. ||..++|..|.. + ..--.+.|++||+++ ++ .|.|..|.
T Consensus 193 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~----~~~Di~~v~avRea~-~~~~L~vDaN~-- 245 (445)
T 3va8_A 193 EGVVKQAKKIIDEYGFKAIKLKGGVF--------------------P----PADEVAAIKALHKAF-PGVPLRLDPNA-- 245 (445)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECSSS--------------------C----HHHHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------C----HHHHHHHHHHHHHhC-CCCcEeeeCCC--
Confidence 4556777777764 999999987541 1 122368899999999 55 67776665
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++. +.|++ ++. +....++.|++.+++||.+...+ +++++.++++.|.
T Consensus 246 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 307 (445)
T 3va8_A 246 -------AWTVETSKWVAKELEGI-VEYLE--DPA--------GEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDA 307 (445)
T ss_dssp -------CBCHHHHHHHHHHTTTT-CSEEE--SCB--------SHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhh-cCeEe--ecC--------cCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCC
Confidence 33578899999999999 99988 441 24566788999999999988777 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 308 ~div~~ 313 (445)
T 3va8_A 308 VQVILS 313 (445)
T ss_dssp CSEEEE
T ss_pred CCEEEe
Confidence 999876
No 167
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.34 E-value=2.7e-06 Score=82.96 Aligned_cols=130 Identities=12% Similarity=0.084 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
++++++.|+.+++.||..++|+.+... .|-.+ ....+--.+.|++||+++|++ .|.|..|.
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~---------------~~~~~-~~~~~~d~~~v~avR~a~g~~~~l~vDaN~-- 210 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGG---------------RHMPL-WEGTKRDIAIVRGISEVAGPAGKIMIDANN-- 210 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTT---------------TTSCH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTT--
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCC---------------ccccc-cccHHHHHHHHHHHHHHcCCCCcEEeeCCC--
Confidence 456677778888999999999986520 11111 112455688999999999987 57777765
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh-----cCCcEEEeCCCCHHHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA-----FEGTFIAAGGYSRDEGNKAV 311 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggit~~~a~~~L 311 (367)
..+.+++..+++.|++.++.|++ ++. . .+....+.+++. .++||.+...+..+++.+++
T Consensus 211 -------~w~~~~A~~~~~~L~~~~l~~iE--eP~-----~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~~~~~~~li 274 (392)
T 3v5c_A 211 -------AYNLNLTKEVLAALSDVNLYWLE--AAF-----H--EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWA 274 (392)
T ss_dssp -------CCCHHHHHHHHHHTTTSCCCEEE--CSS-----S--CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHH
T ss_pred -------CcCHHHHHHHHHhcccCCCeEEe--CCC-----C--cCHHHHHHHHHhhccCCCCCcEECCCcccHHHHHHHH
Confidence 34578899999999999999988 442 1 133455667665 56777776666677889999
Q ss_pred HcCCCcEEcc
Q 017733 312 AANYTDLVAF 321 (367)
Q Consensus 312 ~~G~~D~V~~ 321 (367)
+.|.+|+|.+
T Consensus 275 ~~~a~dii~~ 284 (392)
T 3v5c_A 275 TRGRVDVLQY 284 (392)
T ss_dssp HTTSCCEECC
T ss_pred HcCCCcEEEe
Confidence 9999999865
No 168
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=98.34 E-value=2.6e-06 Score=84.46 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++ .||..++|..|.. + .+--.+.|++||+++ ++ .|.|..|.
T Consensus 195 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~----~~~Di~~v~avRea~-~d~~L~vDaN~-- 247 (445)
T 3vdg_A 195 DGIVAQARRMIDEYGFSAIKLKGGVF--------------------A----PEEEMAAVEALRAAF-PDHPLRLDPNA-- 247 (445)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------C----HHHHHHHHHHHHHHC-TTSCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCC--------------------C----HHHHHHHHHHHHHhC-CCCcEEEECCC--
Confidence 455777777776 5999999987531 1 122378899999999 66 67776665
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.++++.+++.|++. +.|++ ++. +....++.|++.+++||.+...+ ++.++.++++.|.
T Consensus 248 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a 309 (445)
T 3vdg_A 248 -------AWTPQTSVKVAAGLEGV-LEYLE--DPT--------PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNS 309 (445)
T ss_dssp -------CSCHHHHHHHHHHTTTT-CSEEE--CCS--------SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTC
T ss_pred -------CCCHHHHHHHHHHHhhH-HHeee--CCC--------CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCC
Confidence 34578899999999999 99988 441 13456788999999999888777 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 310 ~div~~ 315 (445)
T 3vdg_A 310 VQVVLS 315 (445)
T ss_dssp CSEEEE
T ss_pred CCEEee
Confidence 999876
No 169
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=98.29 E-value=8.6e-07 Score=80.53 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=69.7
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..++++.+++.|+|+|+++....... ....+...++.++ .+++||+++|++ ++++++++++.| +|.|.+++.++.|
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~~~~~G-ad~V~lg~~~l~~ 108 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIE-NSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEKLRKLG-YRRQIVSSKVLED 108 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHH-CCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHHHHHTT-CCEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEeccccccc-CCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHHHHHCC-CCEEEECchHhhC
Confidence 45688899999999999986543211 1223456677787 788999999999 899999999998 9999999999999
Q ss_pred CchHHHHHhC
Q 017733 329 PDLPKRFELN 338 (367)
Q Consensus 329 P~l~~k~~~g 338 (367)
|+++.++ +.
T Consensus 109 p~~~~~~-~~ 117 (241)
T 1qo2_A 109 PSFLKSL-RE 117 (241)
T ss_dssp TTHHHHH-HT
T ss_pred hHHHHHH-HH
Confidence 9999999 54
No 170
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=98.27 E-value=1.2e-05 Score=73.62 Aligned_cols=48 Identities=17% Similarity=0.122 Sum_probs=41.1
Q ss_pred HHHHHHHHHhcCCcE--EEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 282 QRSLLSMRRAFEGTF--IAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 282 ~~~~~~ir~~~~~pv--i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
++.++.+++..++|| |++||+ |++++.++++.| ||.|++||+++..||
T Consensus 187 ~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~le~G-aDGVmVGrAI~~s~D 237 (291)
T 3o07_A 187 VSLLKDVLEKGKLPVVNFAAGGVATPADAALLMQLG-CDGVFVGSGIFKSSN 237 (291)
T ss_dssp HHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHHHTT-CSCEEECGGGGGSSC
T ss_pred HHHHHHHHHccCCCEEEecCCCCCCHHHHHHHHHhC-CCEEEEchHHhCCCC
Confidence 356778888888887 568999 999999999888 999999999998554
No 171
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=98.27 E-value=4.1e-06 Score=82.92 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+++++.|+.+++ .||..++|..|.. + ..--.+.|++||+++ ++ .|.|..|.
T Consensus 190 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~----~~~Di~rv~avRea~-pd~~L~vDaN~-- 242 (441)
T 3vc5_A 190 DGIVAQARLLIGEYGFRSIKLKGGVF--------------------P----PEQEAEAIQALRDAF-PGLPLRLDPNA-- 242 (441)
T ss_dssp HHHHHHHHHHHHHHCCSSEEEECSSS--------------------C----HHHHHHHHHHHHHHS-TTCCEEEECTT--
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCC--------------------C----HHHHHHHHHHHHHhC-CCCcEeccCCC--
Confidence 456677777776 5999999987541 1 122368899999999 55 67776665
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++.++++.|++. +.|++ +|. +....++.|++.+++||.+...+ ++.++.++++.|.
T Consensus 243 -------~w~~~~Ai~~~~~L~~~-l~~iE--eP~--------~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a 304 (441)
T 3vc5_A 243 -------AWTVETSIRVGRALDGV-LEYLE--DPT--------PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRP 304 (441)
T ss_dssp -------CSCHHHHHHHHHHTTTT-CSEEE--CCS--------SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCC
T ss_pred -------CCCHHHHHHHHHHHHHH-HHHhh--ccC--------CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCC
Confidence 34578899999999999 99988 451 13456788999999999887777 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 305 ~dii~~ 310 (441)
T 3vc5_A 305 IGVLLI 310 (441)
T ss_dssp CSEEEE
T ss_pred CCEEee
Confidence 999876
No 172
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=98.26 E-value=4.7e-05 Score=70.21 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=89.8
Q ss_pred HHHHHHHHHhCCCEE--EEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 162 RLAARNAIEAGFDGV--EIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 162 ~~aA~~a~~aGfdgV--ei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
.+.++.+.++|+|.| .++.++. +.+...+.+.++++.+++. |- ++.+.+.+. +.
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~--------------------~~~~~~~~~~~v~~~~~~~-g~-~viv~~~~~-G~- 157 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSD--------------------EDWEAYRDLGMIAETCEYW-GM-PLIAMMYPR-GK- 157 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETST--------------------THHHHHHHHHHHHHHHHHH-TC-CEEEEEEEC-ST-
T ss_pred HHHHHHHHHcCCCEEEEEEecCCC--------------------CHHHHHHHHHHHHHHHHHc-CC-CEEEEeCCC-Cc-
Confidence 345667788999999 4444331 2223345566666666643 42 344433221 00
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCC---HHH----HHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYS---RDE----GNKAVA 312 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit---~~~----a~~~L~ 312 (367)
....+.+.++..++++..++.|+|||-++. +.....++.+++.+++||++.||++ .++ +.++++
T Consensus 158 ~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~ 228 (273)
T 2qjg_A 158 HIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAME 228 (273)
T ss_dssp TCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 000112334445566788899999998762 1245678888888899999999994 666 555667
Q ss_pred cCCCcEEcccHHHHhCCchHHHH
Q 017733 313 ANYTDLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 313 ~G~~D~V~~gR~~ladP~l~~k~ 335 (367)
.| +|.|+++|.++..|+....+
T Consensus 229 ~G-a~gv~vg~~i~~~~~~~~~~ 250 (273)
T 2qjg_A 229 AG-AAGVAVGRNIFQHDDVVGIT 250 (273)
T ss_dssp HT-CSEEECCHHHHTSSSHHHHH
T ss_pred cC-CcEEEeeHHhhCCCCHHHHH
Confidence 88 89999999999998765443
No 173
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=98.25 E-value=7.1e-06 Score=80.01 Aligned_cols=117 Identities=12% Similarity=0.185 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+++.+.||+.++++.+ | ..| .+.|++||+++ ++ .|.+..|.
T Consensus 163 e~~~~~a~~~~~~G~~~~KiKvg----------~----~~d-------------~~~v~avr~a~-~~~~l~vDaN~--- 211 (393)
T 1wuf_A 163 ETLLQLVNQYVDQGYERVKLKIA----------P----NKD-------------IQFVEAVRKSF-PKLSLMADANS--- 211 (393)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECB----------T----TBS-------------HHHHHHHHTTC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHHhhHhheeccC----------h----HHH-------------HHHHHHHHHHc-CCCEEEEECCC---
Confidence 34577788888899999999853 1 112 67899999998 44 45555543
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++ .+++.|++.++.||+ ++. .+.+....+.+++.+++||++...+ ++++++++++.+.+
T Consensus 212 ------~~~~~~a-~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~ 276 (393)
T 1wuf_A 212 ------AYNREDF-LLLKELDQYDLEMIE--QPF------GTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSC 276 (393)
T ss_dssp ------CCCGGGH-HHHHTTGGGTCSEEE--CCS------CSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHH-HHHHHHHhCCCeEEE--CCC------CCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCC
Confidence 2234557 789999999999998 442 1224456778999999999998887 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 277 d~v~i 281 (393)
T 1wuf_A 277 RAINL 281 (393)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 98865
No 174
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.23 E-value=2.1e-06 Score=77.99 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=70.2
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..++++.+++.|+|+||+...+... .+...+ ..++.+++.+++|++++|++ ++++++.+++.| +|.|.+++.++.|
T Consensus 34 ~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~G-ad~V~lg~~~l~~ 110 (244)
T 1vzw_A 34 PLEAALAWQRSGAEWLHLVDLDAAF-GTGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATG-CTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHH-TSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEecCchhh-cCCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcC-CCEEEECchHhhC
Confidence 3457788999999999997532211 122335 77889999999999999999 899999999999 9999999999999
Q ss_pred CchHHHHHhC
Q 017733 329 PDLPKRFELN 338 (367)
Q Consensus 329 P~l~~k~~~g 338 (367)
|+++.++.+.
T Consensus 111 p~~~~~~~~~ 120 (244)
T 1vzw_A 111 PEWVAKVIAE 120 (244)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887653
No 175
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.23 E-value=2.9e-06 Score=76.94 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=70.1
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..++++.+++.|+|+||+...+... .+.... ..++.+++.+++|++++|++ ++++++.+++.| +|.|.+++.++.|
T Consensus 33 ~~~~a~~~~~~Gad~i~v~~~d~~~-~~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~G-ad~V~lg~~~l~~ 109 (244)
T 2y88_A 33 AVDAALGWQRDGAEWIHLVDLDAAF-GRGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATG-CARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHHHHTTCSEEEEEEHHHHT-TSCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEcCcccc-cCCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcC-CCEEEECchHhhC
Confidence 4567888999999999997432111 122334 77889999999999999999 899999999999 9999999999999
Q ss_pred CchHHHHHhC
Q 017733 329 PDLPKRFELN 338 (367)
Q Consensus 329 P~l~~k~~~g 338 (367)
|+++.++.+.
T Consensus 110 p~~~~~~~~~ 119 (244)
T 2y88_A 110 PQWCARVIGE 119 (244)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 9998887653
No 176
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.23 E-value=3.5e-05 Score=70.95 Aligned_cols=155 Identities=15% Similarity=0.189 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhh----------HhHHHHHHHHHHHHHhCCcce
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLEN----------RCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~en----------r~r~~~eii~aiR~~vg~~~i 228 (367)
+...+.++.+.++|+|+|||.. |.+..-.| |-..++ +.+-.+++++++|+.++..|+
T Consensus 31 ~~~~~~~~~l~~~G~D~IElG~-----------P~sdP~ad--gp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi 97 (262)
T 2ekc_A 31 ETSLKAFKEVLKNGTDILEIGF-----------PFSDPVAD--GPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPF 97 (262)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-----------CCSCCTTS--CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHHcCCCEEEECC-----------CCCCcccc--cHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCE
Confidence 3567778888899999999954 22221112 111111 235578999999999744455
Q ss_pred EE--EeCCC-----c---------ccccc-CCCChHHHHHHHHHHhhhcCccEEEEecCCccc-----------------
Q 017733 229 GM--RLSPY-----A---------ECAEA-VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----------------- 274 (367)
Q Consensus 229 ~v--rls~~-----~---------~~~~~-~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----------------- 274 (367)
.+ -+++. + +.++. ..+.+.++...+.+.+.+.|++.+.+..++...
T Consensus 98 ~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~v 177 (262)
T 2ekc_A 98 LLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFV 177 (262)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEE
T ss_pred EEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEE
Confidence 44 22210 0 00100 123345667777777777887765544332110
Q ss_pred -----cCCc-----hhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 275 -----LTDK-----SETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 275 -----~~~~-----~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
.... ......++.+|+.++.||++++|+ |++++.+ +..| +|.|.+|+++...
T Consensus 178 s~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~~~g-ADgvIVGSai~~~ 240 (262)
T 2ekc_A 178 SVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-IGSF-ADGVVVGSALVKL 240 (262)
T ss_dssp SSCC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-HHTT-SSEEEECHHHHHH
T ss_pred ecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-HHcC-CCEEEECHHHHhh
Confidence 0000 112357788999989999999999 6999999 7788 9999999999864
No 177
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=98.23 E-value=2.3e-05 Score=76.59 Aligned_cols=119 Identities=16% Similarity=0.187 Sum_probs=88.4
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCCh
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~ 246 (367)
+++.||.+++++.+.| |. .| ....+--.+.|++||+++|++ .|.|..|. ..+
T Consensus 170 ~~~~Gf~~~K~Kv~~g--------~~-------~g---~~~~~~di~~v~avRea~G~~~~L~vDaN~---------~w~ 222 (404)
T 3ekg_A 170 AQKMGFIGGKMPLHHG--------PS-------EG---EEGLKKNLEELATMRERVGPDFWLMFDCWM---------SLD 222 (404)
T ss_dssp HHHTTCSEEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSEEEEECTT---------CCC
T ss_pred HHHcCCCEEEEecCCC--------Cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEecCCC---------CCC
Confidence 4578999999987543 10 01 112455788999999999987 57776665 345
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcE-EEeC-CC-CHHHHHHHHHcCCCcEEcc
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTF-IAAG-GY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pv-i~~G-gi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.+++.++++.|++.++.||+ ++. .+.+....+.+++.+++|+ |+.| .+ ++.++.++++.+.+|+|.+
T Consensus 223 ~~~A~~~~~~Le~~~l~~iE--eP~------~~~d~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~ 292 (404)
T 3ekg_A 223 LNYATRLARGAREYGLKWIE--EAL------PPDDYWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQP 292 (404)
T ss_dssp HHHHHHHHHHHGGGTCCEEE--CCS------CTTCHHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred HHHHHHHHHHHhhcCCcEEe--cCC------CcccHHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEec
Confidence 78899999999999999998 441 2234566788999988773 4444 45 7999999999999999865
No 178
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=98.22 E-value=2.1e-05 Score=76.03 Aligned_cols=118 Identities=19% Similarity=0.161 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
++++.|+.+.+.||..++++.|. + .+-..+.|++||+++|++ .|.|..|.
T Consensus 147 ~~~~~a~~~~~~G~~~~KiKvG~---------------------~----~~~d~~~v~avr~a~g~~~~l~vDaN~---- 197 (372)
T 3cyj_A 147 RLQEQLGGWAAAGIPRVKMKVGR---------------------E----PEKDPERVRAAREAIGESVELMVDANG---- 197 (372)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS---------------------S----GGGHHHHHHHHHHHHCTTSEEEEECTT----
T ss_pred HHHHHHHHHHHcCCCEEEEcCCC---------------------C----HHHHHHHHHHHHHHhCCCCeEEEECCC----
Confidence 46677778888999999998642 1 223478999999999876 56776654
Q ss_pred cccCCCChHHHHHHHHHHhhhc-CccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCCC-CHHHHHHHHHcC
Q 017733 239 AEAVDSNPEALGLYMAKALNKF-KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~-Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++.++++.|++. ++.||+ +|. .+.+....+.+++.++ +||++...+ +..++.++ .+
T Consensus 198 -----~~~~~~a~~~~~~l~~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~ 262 (372)
T 3cyj_A 198 -----AYTRKQALYWAGAFAREAGISYLE--EPV------SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AG 262 (372)
T ss_dssp -----CSCHHHHHHHHHHHHHHHCCCEEE--CSS------CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HT
T ss_pred -----CCCHHHHHHHHHHHHhhcCCcEEE--CCC------CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hC
Confidence 23578889999999999 999988 442 1234566777898887 688888887 88888887 66
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
.+|+|.+
T Consensus 263 a~d~i~i 269 (372)
T 3cyj_A 263 CVDILQA 269 (372)
T ss_dssp TCSEEEE
T ss_pred CCCEEec
Confidence 6998865
No 179
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.20 E-value=1.4e-05 Score=72.14 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=91.5
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|+++.--|.|. +.+..++.+-|.+|+++++..++ |+=. |.
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNig~lk-------------------~g~~~~v~~eI~~v~~a~~~~~l--KVIl-Et---- 151 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINIGMVK-------------------AKKYDDVEKDVKAVVDASGKALT--KVII-EC---- 151 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHH-------------------TTCHHHHHHHHHHHHHHHTTSEE--EEEC-CG----
T ss_pred HHHHHHHHHcCCCEEEEEeehHHhc-------------------cccHHHHHHHHHHHHHHhcCCce--EEEE-ec----
Confidence 6667888999999999997655433 12345688889999999974333 3322 11
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
...+.++....|+...++|+|||-.+-+.. .........+.+|+.+ +++|-++||+ |.+++.++|+.| ++.
T Consensus 152 -~~Lt~eei~~a~~ia~~aGADfVKTSTGf~----~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~aG-A~r 225 (239)
T 3ngj_A 152 -CYLTNEEKVEVCKRCVAAGAEYVKTSTGFG----THGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNG-ASR 225 (239)
T ss_dssp -GGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHHTT-EEE
T ss_pred -CCCCHHHHHHHHHHHHHHCcCEEECCCCCC----CCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHHhc-ccc
Confidence 123456677788888899999999764421 1122334556566665 4679999999 899999999999 997
Q ss_pred EcccHH
Q 017733 319 VAFGRL 324 (367)
Q Consensus 319 V~~gR~ 324 (367)
++..++
T Consensus 226 iGtS~~ 231 (239)
T 3ngj_A 226 IGASAG 231 (239)
T ss_dssp EEESCH
T ss_pred eecccH
Confidence 766654
No 180
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.18 E-value=1.8e-05 Score=71.29 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=84.5
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
+..+.++|.|+|.+|.... ++ .+.++++++|+. | ..+++.+++..
T Consensus 80 i~~~~~agad~v~vH~~~~---------------~~----------~~~~~~~~i~~~-g-~~igv~~~p~t-------- 124 (228)
T 1h1y_A 80 VEPLAKAGASGFTFHIEVS---------------RD----------NWQELIQSIKAK-G-MRPGVSLRPGT-------- 124 (228)
T ss_dssp HHHHHHHTCSEEEEEGGGC---------------TT----------THHHHHHHHHHT-T-CEEEEEECTTS--------
T ss_pred HHHHHHcCCCEEEECCCCc---------------cc----------HHHHHHHHHHHc-C-CCEEEEEeCCC--------
Confidence 3445568999999997541 10 124667777664 3 35778777631
Q ss_pred ChHHHHHHHHHHhhhc--CccEEEEecC--CccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 245 NPEALGLYMAKALNKF--KLLYLHVIEP--RMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~--Gvd~i~v~~~--~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
+.+ ..+.+.+. ++||+-+... +.......+.....++.+|+.. +.|+++.||++++.+.++++.| +|.|
T Consensus 125 -~~e----~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aG-aD~v 198 (228)
T 1h1y_A 125 -PVE----EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAG-ANCI 198 (228)
T ss_dssp -CGG----GGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHT-CCEE
T ss_pred -CHH----HHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcC-CCEE
Confidence 222 12233344 7899876322 1111111223345677888887 7899999999989999999998 9999
Q ss_pred cccHHHHhCCchHHH
Q 017733 320 AFGRLFLANPDLPKR 334 (367)
Q Consensus 320 ~~gR~~ladP~l~~k 334 (367)
.+|++++..||....
T Consensus 199 vvGsai~~~~d~~~~ 213 (228)
T 1h1y_A 199 VAGSSIFGAAEPGEV 213 (228)
T ss_dssp EESHHHHTSSCHHHH
T ss_pred EECHHHHCCCCHHHH
Confidence 999999987775433
No 181
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=98.16 E-value=2.7e-05 Score=75.81 Aligned_cols=117 Identities=14% Similarity=0.167 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+++.||..+++..+- ..| .+.|++||+++ ++ .|.|..|.
T Consensus 151 e~~~~~~~~~~~~G~~~~K~Kv~~--------------~~d-------------~~~v~avR~~~-~~~~l~vDaN~--- 199 (388)
T 3qld_A 151 DVLIQSVDAAVEQGFRRVKLKIAP--------------GRD-------------RAAIKAVRLRY-PDLAIAADANG--- 199 (388)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBT--------------TBS-------------HHHHHHHHHHC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCc--------------HHH-------------HHHHHHHHHHC-CCCeEEEECCC---
Confidence 566777888888999999998642 122 68899999999 55 45665554
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.. ++.|++.++.||+ ++. .+.+....+.+++.+++||.+...+ +++++.++++.|.+
T Consensus 200 ------~~~~~~A~~-~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~ 264 (388)
T 3qld_A 200 ------SYRPEDAPV-LRQLDAYDLQFIE--QPL------PEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAA 264 (388)
T ss_dssp ------CCCGGGHHH-HHHGGGGCCSCEE--CCS------CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCC
T ss_pred ------CCChHHHHH-HHHHhhCCCcEEE--CCC------CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCC
Confidence 223455665 7899999999988 442 1234566788999999999998887 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 265 d~v~~ 269 (388)
T 3qld_A 265 RVLNV 269 (388)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98865
No 182
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.15 E-value=5e-05 Score=69.08 Aligned_cols=103 Identities=11% Similarity=0.001 Sum_probs=68.4
Q ss_pred HHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc--ccCCchhhHHHHHHHHHh--
Q 017733 217 EAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI--QLTDKSETQRSLLSMRRA-- 291 (367)
Q Consensus 217 ~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~--~~~~~~~~~~~~~~ir~~-- 291 (367)
..+|+..+++ .|++-.. +.+++ ....+.|+|||-+..-... .+...+...+.++.+++.
T Consensus 126 ~~~r~~~~~~~~iG~S~h------------t~~Ea----~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~ 189 (243)
T 3o63_A 126 NVARQILAPDTLIGRSTH------------DPDQV----AAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGG 189 (243)
T ss_dssp HHHHHHSCTTCEEEEEEC------------SHHHH----HHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC--
T ss_pred HHHHHhhCCCCEEEEeCC------------CHHHH----HHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhcc
Confidence 4567777766 5676322 23332 2334579999987432111 111112235567777776
Q ss_pred cCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHH
Q 017733 292 FEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFE 336 (367)
Q Consensus 292 ~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~ 336 (367)
.++||++.|||+++++.++++.| +|.|+++++++..+|....++
T Consensus 190 ~~iPvvAiGGI~~~ni~~~~~aG-a~gvav~sai~~a~dp~~a~~ 233 (243)
T 3o63_A 190 DDKPWFAIGGINAQRLPAVLDAG-ARRIVVVRAITSADDPRAAAE 233 (243)
T ss_dssp -CCCEEEESSCCTTTHHHHHHTT-CCCEEESHHHHTCSSHHHHHH
T ss_pred CCCCEEEecCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHHHHH
Confidence 57999999999999999999999 999999999999877554443
No 183
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=98.14 E-value=3.9e-05 Score=74.28 Aligned_cols=119 Identities=11% Similarity=0.132 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh-CCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI-GAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v-g~~-~i~vrls~~~ 236 (367)
++.++.|+.+++.||..++|+.|.. . .+.-++.|++||+++ |++ .|.|..|.
T Consensus 152 ~~~~~~a~~~~~~G~~~~KiKvg~~--------------------~----~~~di~~v~~vr~a~~g~~~~l~vDaN~-- 205 (376)
T 4h2h_A 152 DEAARQALEKQREGYSRLQVKLGAR--------------------P----IEIDIEAIRKVWEAVRGTGIALAADGNR-- 205 (376)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSS--------------------C----HHHHHHHHHHHHHHHTTSCCEEEEECTT--
T ss_pred HHHHHHHHHHHhcCceEEEEecCCC--------------------C----HHHHHHHHHHHHhhccCCeeEEEEeecc--
Confidence 3456667777889999999987641 1 223478899999998 665 46666554
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
..+.+++..+++.|++.++ |++ ++- ...+.++.+++.+++||.+...+ +.+++.++++.+.
T Consensus 206 -------~~~~~~A~~~~~~l~~~~~-~iE--eP~--------~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~ 267 (376)
T 4h2h_A 206 -------GWTTRDALRFSRECPDIPF-VME--QPC--------NSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSL 267 (376)
T ss_dssp -------CCCHHHHHHHHHHCTTSCE-EEE--SCS--------SSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTC
T ss_pred -------CCCHHHHHHHHHHHhhccc-ccc--CCc--------chhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhc
Confidence 3357889999999998876 665 431 12345677999999999988877 8999999999999
Q ss_pred CcEEcc
Q 017733 316 TDLVAF 321 (367)
Q Consensus 316 ~D~V~~ 321 (367)
+|+|.+
T Consensus 268 ~d~v~~ 273 (376)
T 4h2h_A 268 VDGFGM 273 (376)
T ss_dssp CSEECC
T ss_pred cCcccc
Confidence 998754
No 184
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.11 E-value=4.5e-05 Score=70.58 Aligned_cols=134 Identities=12% Similarity=0.026 Sum_probs=88.7
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|+++.-.|.|.+ ++...+.+-|.+|+++++... +|+=...
T Consensus 129 v~Ea~~Ai~~GAdEIDmVINig~lk~-------------------g~~~~v~~eI~~V~~a~~~~~--lKVIlEt----- 182 (288)
T 3oa3_A 129 VSEAKRAMQNGASELDMVMNYPWLSE-------------------KRYTDVFQDIRAVRLAAKDAI--LKVILET----- 182 (288)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSE--EEEECCG-----
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcC-------------------CcHHHHHHHHHHHHHHhcCCC--ceEEEEC-----
Confidence 56678889999999998765543222 234567888999999997532 3332211
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh--cCCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA--FEGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~--~~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
...+.++....|+...++|+|||-.+-+. ....--......++.+.+. -+++|.+.||+ |.++|.++|+.| ++-
T Consensus 183 -~~Lt~eei~~A~~ia~eaGADfVKTSTGf-~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aG-A~R 259 (288)
T 3oa3_A 183 -SQLTADEIIAGCVLSSLAGADYVKTSTGF-NGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAG-AER 259 (288)
T ss_dssp -GGCCHHHHHHHHHHHHHTTCSEEECCCSS-SSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEcCCCC-CCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-Cce
Confidence 12345666677888889999999876442 2111112233344444332 35789999999 899999999999 996
Q ss_pred EcccHH
Q 017733 319 VAFGRL 324 (367)
Q Consensus 319 V~~gR~ 324 (367)
++..++
T Consensus 260 iGtS~g 265 (288)
T 3oa3_A 260 LGASAG 265 (288)
T ss_dssp EEESCH
T ss_pred eehhhH
Confidence 666555
No 185
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=98.11 E-value=2.7e-05 Score=77.27 Aligned_cols=125 Identities=12% Similarity=0.090 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+++++.|+.+++ .||..++|..|.. +. .--.+.|++||+++++..|.|..|.
T Consensus 184 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~~v~avRea~pd~~L~vDaN~--- 236 (450)
T 3mzn_A 184 EAVANLARAAYDRYGFKDFKLKGGVL--------------------RG----EEEADCIRALHEAFPEARLALDPNG--- 236 (450)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECSSS--------------------CH----HHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCC--------------------CH----HHHHHHHHHHHHhCCCCeEEEECCC---
Confidence 456777777776 6999999987541 11 2236789999999742256666554
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++..+++.|++. +.||+ ++.... ........++.|++.+++||.+.... +..++.++++.|.+
T Consensus 237 ------~w~~~~A~~~~~~L~~~-i~~iE--eP~~~~--d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~ 305 (450)
T 3mzn_A 237 ------AWKLDEAVRVLEPIKHL-LSYAE--DPCGQE--GGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSV 305 (450)
T ss_dssp ------CBCHHHHHHHHGGGGGG-CSEEE--SSBCCB--TTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCC
T ss_pred ------CCCHHHHHHHHHHhhhc-cceee--CCCCcc--cccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCC
Confidence 33578899999999998 88887 442110 00001356788999999999887666 78999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|++.+
T Consensus 306 di~~~ 310 (450)
T 3mzn_A 306 DIPLA 310 (450)
T ss_dssp SEEBC
T ss_pred CEEEe
Confidence 98853
No 186
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=98.10 E-value=2.2e-05 Score=78.20 Aligned_cols=123 Identities=15% Similarity=0.114 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+++++.|+.+++ .||..++|..|.. +. .--.+.|++||+++++..|.|..|.
T Consensus 202 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~rv~avRea~pd~~L~vDaN~--- 254 (470)
T 3p0w_A 202 AAIARLAEAATERYGFADFKLKGGVM--------------------PG----AEEMEAIAAIKARFPHARVTLDPNG--- 254 (470)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECSSS--------------------CH----HHHHHHHHHHHHHCTTSEEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCC--------------------CH----HHHHHHHHHHHHhCCCCeEEeeCCC---
Confidence 566777888777 6999999987531 11 2236789999999742256666654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCch--hhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKS--ETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~--~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++..+++.|++. +.||+ ++... .. .....++.|++.+++||.+...+ +..++.++++.+
T Consensus 255 ------~w~~~~Ai~~~~~Le~~-l~~iE--eP~~~----~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~ 321 (470)
T 3p0w_A 255 ------AWSLNEAIALCKGQGHL-VAYAE--DPCGP----EAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLH 321 (470)
T ss_dssp ------BBCHHHHHHHHTTCTTT-CSEEE--SCBCC----BTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTT
T ss_pred ------CCCHHHHHHHHHhcccc-ceeec--CCCCh----hhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcC
Confidence 23578899999999998 88887 44211 11 01356788999999999887666 789999999999
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
.+|++.+
T Consensus 322 a~div~~ 328 (470)
T 3p0w_A 322 AVDIPLA 328 (470)
T ss_dssp CCSEEBC
T ss_pred CCCEEEe
Confidence 9998854
No 187
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.09 E-value=2.5e-05 Score=68.88 Aligned_cols=126 Identities=15% Similarity=0.073 Sum_probs=76.1
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
+.+.++|+|+|-+|...+ ...+.++++.+++. |. .+++-+... .+
T Consensus 71 ~~a~~~Gad~v~vh~~~~-------------------------~~~~~~~~~~~~~~-g~-~~gv~~~s~--------~~ 115 (207)
T 3ajx_A 71 DIAFKAGADLVTVLGSAD-------------------------DSTIAGAVKAAQAH-NK-GVVVDLIGI--------ED 115 (207)
T ss_dssp HHHHHTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-TC-EEEEECTTC--------SS
T ss_pred HHHHhCCCCEEEEeccCC-------------------------hHHHHHHHHHHHHc-CC-ceEEEEecC--------CC
Confidence 566789999999997542 01233455555543 32 355544210 11
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEcccH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 323 (367)
+.+ .++.+.+.|+||+.+.........+.. ... +.+|+.. +.|+++.||++++.+.++++.| +|+|.+||
T Consensus 116 p~~----~~~~~~~~g~d~v~~~~~~~~~~~g~~-~~~--~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-ad~vvvGs 187 (207)
T 3ajx_A 116 KAT----RAQEVRALGAKFVEMHAGLDEQAKPGF-DLN--GLLAAGEKARVPFSVAGGVKVATIPAVQKAG-AEVAVAGG 187 (207)
T ss_dssp HHH----HHHHHHHTTCSEEEEECCHHHHTSTTC-CTH--HHHHHHHHHTSCEEEESSCCGGGHHHHHHTT-CSEEEESH
T ss_pred hHH----HHHHHHHhCCCEEEEEecccccccCCC-chH--HHHHHhhCCCCCEEEECCcCHHHHHHHHHcC-CCEEEEee
Confidence 222 223445568999855432111001111 111 4444444 6899999999999999999999 99999999
Q ss_pred HHHhCCchHHH
Q 017733 324 LFLANPDLPKR 334 (367)
Q Consensus 324 ~~ladP~l~~k 334 (367)
+++..+|....
T Consensus 188 aI~~~~dp~~~ 198 (207)
T 3ajx_A 188 AIYGAADPAAA 198 (207)
T ss_dssp HHHTSSSHHHH
T ss_pred eccCCCCHHHH
Confidence 99987764333
No 188
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.08 E-value=9e-05 Score=66.76 Aligned_cols=50 Identities=18% Similarity=0.274 Sum_probs=41.8
Q ss_pred HHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 283 RSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 283 ~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
.-++.+|+.. +.++.+.||++++.+.++++.| +|.+.+||+++..+|...
T Consensus 158 ~ki~~lr~~~~~~~I~VdGGI~~~t~~~~~~aG-Ad~~VvGsaIf~a~dp~~ 208 (228)
T 3ovp_A 158 PKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAG-ANMIVSGSAIMRSEDPRS 208 (228)
T ss_dssp HHHHHHHHHCTTCEEEEESSCSTTTHHHHHHHT-CCEEEESHHHHTCSCHHH
T ss_pred HHHHHHHHhcCCCCEEEeCCcCHHHHHHHHHcC-CCEEEEeHHHhCCCCHHH
Confidence 4466777776 4678899999999999999999 999999999998776543
No 189
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=98.07 E-value=3.7e-05 Score=76.07 Aligned_cols=119 Identities=17% Similarity=0.134 Sum_probs=88.9
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCCh
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~ 246 (367)
+++.||.++++..+.+ |. .| ....+-..+.|++||+++|++ .|.|..|. ..+
T Consensus 176 ~~~~Gf~~~KlKv~~~--------~~-------~G---~~~~~~di~rv~avRea~G~d~~L~vDaN~---------~wt 228 (455)
T 3fxg_A 176 AKAMGFWGGKVPLPFC--------PD-------DG---HEGLRKNVEFLRKHREAVGPDFPIMVDCYM---------SLN 228 (455)
T ss_dssp HHHHTCSCEEEECCCC--------GG-------GH---HHHHHHHHHHHHHHHHHHCSSSCEEEECTT---------CCC
T ss_pred HHHcCCCEEEEcCCCC--------cc-------cc---cccHHHHHHHHHHHHHHhCCCCeEEEeCCC---------CCC
Confidence 4578999999987542 10 01 123456788999999999987 57777665 345
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.++++++++.|++.++.|++ ++. .+.+...++.+++.++ +||.+...+ ++.++.++++.+.+|+|.+
T Consensus 229 ~~~Ai~~~~~Le~~~l~~iE--EPl------~~dd~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~ 297 (455)
T 3fxg_A 229 VSYTIELVKACLDLNINWWE--ECL------SPDDTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp HHHHHHHHHHTGGGCCSEEE--CCS------CGGGGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECC
T ss_pred HHHHHHHHHhcccCCcceec--CCC------CcchHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEE
Confidence 78899999999999999988 442 1234456777888875 677777776 7999999999999999875
No 190
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.05 E-value=9.9e-05 Score=68.15 Aligned_cols=155 Identities=12% Similarity=0.138 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhh----------HhHHHHHHHHHHHHHhCCcce
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLEN----------RCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~en----------r~r~~~eii~aiR~~vg~~~i 228 (367)
+.+.+.++.+.++|.|.|||... .++--.| |-.+++ +.+-++++++++|+....-||
T Consensus 34 ~~~~~~~~~l~~~GaD~iElGiP-----------fSDP~aD--GpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pi 100 (271)
T 3nav_A 34 EQSLAIMQTLIDAGADALELGMP-----------FSDPLAD--GPTIQGANLRALAAKTTPDICFELIAQIRARNPETPI 100 (271)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECC-----------CCCGGGC--CSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred HHHHHHHHHHHHcCCCEEEECCC-----------CCCCCCC--CHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCE
Confidence 46788888888999999998753 2222233 333332 234678999999987322354
Q ss_pred EE--EeCCC-----ccc---------cc-cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-----------------
Q 017733 229 GM--RLSPY-----AEC---------AE-AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----------------- 274 (367)
Q Consensus 229 ~v--rls~~-----~~~---------~~-~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----------------- 274 (367)
.+ -+|+. +.| ++ ...+.+.++...+.+.+.+.|++.+.+..++...
T Consensus 101 vlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~v 180 (271)
T 3nav_A 101 GLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLL 180 (271)
T ss_dssp EEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEEC
T ss_pred EEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEE
Confidence 33 22321 000 00 0112345555666666777777766554332110
Q ss_pred -----cCC----chhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 275 -----LTD----KSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 275 -----~~~----~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
... .....+.++.+|+.++.||++++|+ |++++.+.+..| +|.|.+|.+++.
T Consensus 181 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~g-ADgvIVGSAiv~ 242 (271)
T 3nav_A 181 SRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAG-AAGAISGSAVVK 242 (271)
T ss_dssp CCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEESHHHHH
T ss_pred eccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 000 0112356788999999999999999 799999999998 999999999874
No 191
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=98.04 E-value=1.6e-05 Score=77.10 Aligned_cols=122 Identities=7% Similarity=0.060 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhC-Cc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIG-AE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg-~~-~i~vrls~~~ 236 (367)
+.+++.|+.+.+.||..++|..|.. + .+-.++.|+++|+++| ++ .|.+..|.
T Consensus 164 e~~~~~a~~~~~~G~~~~K~Kvg~~--------------------~----~~~d~~~v~avr~~~g~~~~~l~vDaN~-- 217 (377)
T 2pge_A 164 AFMQEQIEAKLAEGYGCLKLKIGAI--------------------D----FDKECALLAGIRESFSPQQLEIRVDANG-- 217 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-----------------------C----HHHHHHHHHHHHHHSCTTTCEEEEECTT--
T ss_pred HHHHHHHHHHHHHhhhhheeecCCC--------------------C----hHHHHHHHHHHHHHcCCCCceEEEECCC--
Confidence 3455677778889999999986420 1 3456899999999998 76 46666554
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHH--HHHHHHc
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDE--GNKAVAA 313 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~--a~~~L~~ 313 (367)
. .+.+++.++++.|++.++.||+ +|. .+.+....+.+++.+++||++...+ |..+ +.++++.
T Consensus 218 ~-------~~~~~a~~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~ 282 (377)
T 2pge_A 218 A-------FSPANAPQRLKRLSQFHLHSIE--QPI------RQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDA 282 (377)
T ss_dssp B-------BCTTTHHHHHHHHHTTCCSEEE--CCB------CSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHH
T ss_pred C-------CCHHHHHHHHHHHhcCCCcEEE--ccC------CcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHh
Confidence 1 2345678899999999999988 441 1224566778998899999998877 6655 7799998
Q ss_pred CCCcEEcc
Q 017733 314 NYTDLVAF 321 (367)
Q Consensus 314 G~~D~V~~ 321 (367)
+.+|+|.+
T Consensus 283 ~a~d~i~i 290 (377)
T 2pge_A 283 IRPQYIIL 290 (377)
T ss_dssp HCCSEEEE
T ss_pred CCCCEEEE
Confidence 88998855
No 192
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.04 E-value=3.7e-05 Score=68.73 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=55.3
Q ss_pred HhhhcCccEEEEec--CCccccC-CchhhHHHHHHHHHhcC-CcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCch
Q 017733 256 ALNKFKLLYLHVIE--PRMIQLT-DKSETQRSLLSMRRAFE-GTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 256 ~L~~~Gvd~i~v~~--~~~~~~~-~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l 331 (367)
...+.|+||+-++. .+..... ..+.....++.+++.++ +||++.||++++++.++++.| +|.|.++++++..+|.
T Consensus 131 ~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~ 209 (227)
T 2tps_A 131 QAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDNAAPVIQAG-ADGVSMISAISQAEDP 209 (227)
T ss_dssp HHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTTSHHHHHTT-CSEEEESHHHHTSSCH
T ss_pred HHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHcC-CCEEEEhHHhhcCCCH
Confidence 34567999998632 1111111 12234567788888888 999999999999999999988 9999999999976654
No 193
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=98.04 E-value=4.1e-05 Score=74.40 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+++++.|+.+.+.||..+++..+ | ..| .+.|++||+++ ++ .|.+..|.
T Consensus 163 ~~~~~~a~~~~~~G~~~~KiKvg----------~----~~d-------------~~~v~avr~a~-~~~~l~vDaN~--- 211 (386)
T 1wue_A 163 PQLLKQVQLAVEKGYQRVKLKIR----------P----GYD-------------VEPVALIRQHF-PNLPLMVDANS--- 211 (386)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECB----------T----TBS-------------HHHHHHHHHHC-TTSCEEEECTT---
T ss_pred HHHHHHHHHHHHhhhheEEEeeC----------c----HHH-------------HHHHHHHHHhC-CCCeEEEeCCC---
Confidence 34567777788899999999753 1 111 67799999999 44 56666554
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++ .+++.|++.++.||+ ++. .+.+....+.+++.+++||++...+ +++++.++++.+.+
T Consensus 212 ------~~~~~~a-~~~~~l~~~~i~~iE--qP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~ 276 (386)
T 1wue_A 212 ------AYTLADL-PQLQRLDHYQLAMIE--QPF------AADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSC 276 (386)
T ss_dssp ------CCCGGGH-HHHHGGGGSCCSCEE--CCS------CTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCC
T ss_pred ------CCCHHHH-HHHHHHHhCCCeEEe--CCC------CcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCC
Confidence 1234556 789999999999988 442 1224456777899899999998887 89999999999999
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 277 d~i~i 281 (386)
T 1wue_A 277 RSINL 281 (386)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98865
No 194
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.03 E-value=6.6e-05 Score=68.51 Aligned_cols=134 Identities=15% Similarity=0.119 Sum_probs=91.8
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|+++.--|.|.+ ++...+.+-|.+|+++++..++ |+=.+.
T Consensus 114 v~Ea~~Ai~~GAdEIDmViNig~lk~-------------------g~~~~v~~eI~~v~~a~~~~~l--KVIlEt----- 167 (260)
T 3r12_A 114 AHEAIFAVESGADEIDMVINVGMLKA-------------------KEWEYVYEDIRSVVESVKGKVV--KVIIET----- 167 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEE--EEECCG-----
T ss_pred HHHHHHHHHcCCCEEEEEeehhhhcc-------------------ccHHHHHHHHHHHHHhcCCCcE--EEEEeC-----
Confidence 56678889999999999875543332 2345678888999999874344 332211
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
...+.++....|+...++|+|||-.+-+.. +.....+..+.+++.+ +++|-++||+ |.++|.++|+.| ++-
T Consensus 168 -~~Lt~eei~~A~~ia~eaGADfVKTSTGf~----~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~aG-A~R 241 (260)
T 3r12_A 168 -CYLDTEEKIAACVISKLAGAHFVKTSTGFG----TGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYG-ADR 241 (260)
T ss_dssp -GGCCHHHHHHHHHHHHHTTCSEEECCCSSS----SCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred -CCCCHHHHHHHHHHHHHhCcCEEEcCCCCC----CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcC-Cce
Confidence 123456677788888899999998764421 1122345566666665 4679999999 899999999999 995
Q ss_pred Ecc--cHHHHh
Q 017733 319 VAF--GRLFLA 327 (367)
Q Consensus 319 V~~--gR~~la 327 (367)
++. |+.++.
T Consensus 242 iGtS~g~~I~~ 252 (260)
T 3r12_A 242 IGTSSGVKIVQ 252 (260)
T ss_dssp EEESCHHHHHH
T ss_pred eecchHHHHHH
Confidence 554 444443
No 195
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=98.02 E-value=3.3e-05 Score=76.75 Aligned_cols=123 Identities=14% Similarity=0.124 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 NDFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+++++.|+.+++ .||..++|..|.. +. .--.+.|++||+++++..|.|..|.
T Consensus 187 e~~~~~a~~~~~~~Gf~~~KlKvG~~--------------------~~----~~Di~~v~avRea~pd~~L~vDaN~--- 239 (455)
T 3pfr_A 187 QAVIELAAASKDRYGFKDFKLKGGVF--------------------EG----SKEIDTVIELKKHFPDARITLDPNG--- 239 (455)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEECSSS--------------------CH----HHHHHHHHHHHHHCTTCCEEEECTT---
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCC--------------------CH----HHHHHHHHHHHHhCCCCeEeecCCC---
Confidence 456777777776 6999999987531 11 1236789999999742256666654
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCch--hhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKS--ETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~--~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
..+.+++..+++.|++. +.||+ ++.. ... .....++.|++.+++||.+.... +..++.++++.+
T Consensus 240 ------~w~~~~A~~~~~~L~~~-l~~iE--eP~~----~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 306 (455)
T 3pfr_A 240 ------CWSLDEAIQLCKGLNDV-LTYAE--DPCI----GENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQ 306 (455)
T ss_dssp ------BSCHHHHHHHHTTCTTT-CSEEE--SCBC----CBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHT
T ss_pred ------CCCHHHHHHHHHhhccc-ceeee--cCCC----hhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcC
Confidence 33578899999999998 88887 4421 111 01356788999999999887666 789999999999
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
.+|++.+
T Consensus 307 a~di~~~ 313 (455)
T 3pfr_A 307 SVDIPLA 313 (455)
T ss_dssp CCSEEBC
T ss_pred CCCEEEe
Confidence 9998853
No 196
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.01 E-value=6.8e-05 Score=66.30 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=57.1
Q ss_pred hhhcCccEEEEec--CCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHHH
Q 017733 257 LNKFKLLYLHVIE--PRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 257 L~~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k 334 (367)
..+.|+||+-+.. ++.............++.+++.+++|+++.||++++++.++++.| +|.|.+|++++..||...+
T Consensus 124 ~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~~~nv~~~~~~G-a~gv~vgs~i~~~~d~~~~ 202 (215)
T 1xi3_A 124 AEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGINKDNAREVLKTG-VDGIAVISAVMGAEDVRKA 202 (215)
T ss_dssp HHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCCTTTHHHHHTTT-CSEEEESHHHHTSSSHHHH
T ss_pred HHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcCHHHHHHHHHcC-CCEEEEhHHHhCCCCHHHH
Confidence 4567999998743 111111112334566778888889999999999999999999887 9999999999988775444
Q ss_pred H
Q 017733 335 F 335 (367)
Q Consensus 335 ~ 335 (367)
+
T Consensus 203 ~ 203 (215)
T 1xi3_A 203 T 203 (215)
T ss_dssp H
T ss_pred H
Confidence 4
No 197
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.00 E-value=0.00017 Score=66.32 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=85.9
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCC--cceEEEeCCCccccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGA--ERVGMRLSPYAECAE 240 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~--~~i~vrls~~~~~~~ 240 (367)
..++.|.+.|+|+|+++.-- .. ++. +..++-+.++++.+.. -++.+-..+ +...
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~ni--------------g~----~~~----~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~ 151 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYP--------------GS----GFE----WKMFEELARIKRDAVKFDLPLVVESFP--RGGK 151 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECT--------------TS----TTH----HHHHHHHHHHHHHHHHHTCCEEEEECC--CSTT
T ss_pred HHHHHHHHCCCCEEEEEEec--------------CC----cCH----HHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCc
Confidence 45677788999999987522 11 122 2334444444444421 133332111 1011
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCC---CHHHHHHHH----H
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGY---SRDEGNKAV----A 312 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggi---t~~~a~~~L----~ 312 (367)
.....+.++....++...+.|+|||-++-+ ...+.++.+++.++. ||++.||+ |.+++.+.+ +
T Consensus 152 ~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~---------~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~ 222 (263)
T 1w8s_A 152 VVNETAPEIVAYAARIALELGADAMKIKYT---------GDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLE 222 (263)
T ss_dssp CCCTTCHHHHHHHHHHHHHHTCSEEEEECC---------SSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 111114455555677788899999987621 134567778888787 99999998 466666555 8
Q ss_pred cCCCcEEcccHHHHhCCchHHHH
Q 017733 313 ANYTDLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 313 ~G~~D~V~~gR~~ladP~l~~k~ 335 (367)
.| ++.++++|.++..||-...+
T Consensus 223 aG-A~GvsvgraI~~~~dp~~~~ 244 (263)
T 1w8s_A 223 AG-ALGIAVGRNVWQRRDALKFA 244 (263)
T ss_dssp TT-CCEEEESHHHHTSTTHHHHH
T ss_pred cC-CeEEEEehhhcCCcCHHHHH
Confidence 88 89999999999999854443
No 198
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=97.98 E-value=3.2e-05 Score=73.57 Aligned_cols=111 Identities=23% Similarity=0.311 Sum_probs=74.9
Q ss_pred HhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHH
Q 017733 170 EAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEA 248 (367)
Q Consensus 170 ~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~ 248 (367)
+.||..++|..+.. |.+++ --.+.|++||+++|++ .|.|..|. ..+.+
T Consensus 90 ~~G~~~~KiKvg~~------------------g~~~~----~d~~~v~avR~~~G~~~~L~vDaN~---------~w~~~ 138 (327)
T 2opj_A 90 SSGCTTAKVKVAER------------------GQSEA----NDVARVEAVRDALGPRGRVRIDVNG---------AWDVD 138 (327)
T ss_dssp HHCCSEEEEECCC----------------------------CHHHHHHHHHHHHCTTSEEEEECTT---------CSCHH
T ss_pred HCCCCEEEEEeCCC------------------CCCHH----HHHHHHHHHHHHhCCCCEEEEECCC---------CCCHH
Confidence 57999999987530 11111 2368899999999976 56666554 33578
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
++..+++.|++.++.||+ ++. . .....+.+++.+++||.+...+ +..++.++++.+.+|+|.+
T Consensus 139 ~A~~~~~~L~~~~l~~iE--qP~-----~---~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~i 202 (327)
T 2opj_A 139 TAVRMIRLLDRFELEYVE--QPC-----A---TVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVL 202 (327)
T ss_dssp HHHHHHHHHGGGCEEEEE--CCS-----S---SHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEE
T ss_pred HHHHHHHHHHhcCCcEEe--CCC-----C---CHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 899999999999999988 442 1 2356778999999999998887 8889999999999998865
No 199
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=97.98 E-value=6.7e-05 Score=69.16 Aligned_cols=159 Identities=13% Similarity=0.083 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEe------cccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE--
Q 017733 159 NDFRLAARNAIEAGFDGVEIH------GANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-- 230 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~------~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-- 230 (367)
+.+.+.++.+.++|.|.|||. .+.|-.+++-- .|.=+.|- +.+-++++|+++|+....-||.+
T Consensus 32 ~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~-----~~AL~~G~----~~~~~~~~v~~ir~~~~~~Pivlm~ 102 (267)
T 3vnd_A 32 ELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGAN-----LRSLAAGT----TSSDCFDIITKVRAQHPDMPIGLLL 102 (267)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHH-----HHHHHTTC----CHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHH-----HHHHHcCC----CHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 457788888889999999998 44454444431 22222232 23467999999998722224332
Q ss_pred EeCCC-----cccc---------c-cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc---------------------
Q 017733 231 RLSPY-----AECA---------E-AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ--------------------- 274 (367)
Q Consensus 231 rls~~-----~~~~---------~-~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~--------------------- 274 (367)
-+|+. +.|. + ...+.+.++..++.+.+.+.|++.+-+..++...
T Consensus 103 Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~G 182 (267)
T 3vnd_A 103 YANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAG 182 (267)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCC
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCC
Confidence 22321 0000 0 0112344555556666666676665443322110
Q ss_pred -cCC----chhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 275 -LTD----KSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 275 -~~~----~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
... .....+.++.+|+.++.||++++|+ |++++.+.+..| +|.|.+|.+++.
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~g-ADgvVVGSaiv~ 240 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAG-AAGAISGSAVVK 240 (267)
T ss_dssp CC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred CCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CCEEEECHHHHH
Confidence 000 0112356788999889999999999 799999999998 999999998874
No 200
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=97.98 E-value=5.6e-05 Score=75.27 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=86.5
Q ss_pred HHHHHH-HHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 163 LAARNA-IEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 163 ~aA~~a-~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+.++++ .+.||+.++|+.|.. + ..--.+.|++||+++|+..|.|..|.
T Consensus 208 ~~~~~~~~~~Gf~~~KlKvG~~--------------------~----~~~di~~v~avrea~pd~~L~vDaN~------- 256 (464)
T 4g8t_A 208 RLAEAAYEKYGFNDFKLKGGVL--------------------D----GFEEAEAVTALAKRFPDARITLDPNG------- 256 (464)
T ss_dssp HHHHHHHHHHCCSCEEEECSSS--------------------C----HHHHHHHHHHHHHHSTTCCEEEECTT-------
T ss_pred HHHHHHHHHcCCCeEEEeCCCC--------------------C----HHHHHHHHHHHHhhCCCceEEEECCC-------
Confidence 333333 456999999987641 1 12236889999999985466766654
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEc
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 320 (367)
..+.++++++++.|++. +.|++ ++.... ........++.+++.+++||.+...+ ++.++.++++.+.+|++.
T Consensus 257 --~wt~~~Ai~~~~~le~~-l~wiE--eP~~~~--d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~ 329 (464)
T 4g8t_A 257 --AWSLDEAVKIGKQLKGV-LAYAE--DPCGAE--QGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPL 329 (464)
T ss_dssp --CBCHHHHHHHHHHTTTT-CSCEE--SCBCCB--TTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEB
T ss_pred --ccCHHHHHHHHHHhhhc-cceee--cCcCcc--cccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEe
Confidence 33578899999999887 88876 442110 01112356788999999999998887 899999999999999765
Q ss_pred c
Q 017733 321 F 321 (367)
Q Consensus 321 ~ 321 (367)
.
T Consensus 330 ~ 330 (464)
T 4g8t_A 330 A 330 (464)
T ss_dssp C
T ss_pred c
Confidence 3
No 201
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.97 E-value=1.2e-05 Score=73.88 Aligned_cols=85 Identities=12% Similarity=-0.055 Sum_probs=58.9
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.++++.+++.|+++|-++..+....... .....++.+++.+++||+++||+ +++++.++++.| +|.|++|++++.+|
T Consensus 159 ~e~~~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~G-adgv~vgsal~~~~ 236 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFRE 236 (266)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTTCSC-CCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESTTTC---
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCcCC-CCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcC-CHHHHccHHHHcCC
Confidence 3567778889999988765432222222 24677888999999999999999 799999999888 99999999999999
Q ss_pred chHHHHHh
Q 017733 330 DLPKRFEL 337 (367)
Q Consensus 330 ~l~~k~~~ 337 (367)
+.+.++++
T Consensus 237 ~~~~~~~~ 244 (266)
T 2w6r_A 237 IDMRELKE 244 (266)
T ss_dssp --------
T ss_pred CCHHHHHH
Confidence 87777655
No 202
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=97.97 E-value=3.8e-05 Score=70.94 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 282 QRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
...++.+|+..+.||++.||+ |++++.+++..| +|.|.+|.+++.
T Consensus 194 ~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~ag-AD~vVVGSai~~ 239 (268)
T 1qop_A 194 HHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAG-AAGAISGSAIVK 239 (268)
T ss_dssp HHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred HHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcC-CCEEEEChHHhh
Confidence 467888999889999999999 699999999999 999999999864
No 203
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=97.97 E-value=1.9e-05 Score=71.62 Aligned_cols=54 Identities=13% Similarity=0.266 Sum_probs=48.6
Q ss_pred hHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc-hHHHHH
Q 017733 281 TQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD-LPKRFE 336 (367)
Q Consensus 281 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~-l~~k~~ 336 (367)
....++++++.+ ++||+.+||| |+++++++++ | +|.|.+|.+++.+|+ ++++++
T Consensus 169 ~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-g-Ad~VIVGSa~v~~~~~~~~~v~ 225 (240)
T 1viz_A 169 DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-H-ADVIVVGNAVYEDFDRALKTVA 225 (240)
T ss_dssp CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-T-CSEEEECTHHHHCHHHHHTHHH
T ss_pred hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-C-CCEEEEChHHHhCHHHHHHHHH
Confidence 456788999999 9999999999 8999999887 7 999999999999999 888764
No 204
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.94 E-value=0.00026 Score=63.36 Aligned_cols=135 Identities=16% Similarity=0.072 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
-+..++.|.+.|.|.|+++.--|.+.+. +...+.+-|.+|+++++.. .+|+=...
T Consensus 73 k~~e~~~Ai~~GAdevd~vinig~~~~g-------------------~~~~v~~ei~~v~~a~~~~--~lkvIlet---- 127 (220)
T 1ub3_A 73 KALEAALACARGADEVDMVLHLGRAKAG-------------------DLDYLEAEVRAVREAVPQA--VLKVILET---- 127 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTT-------------------CHHHHHHHHHHHHHHSTTS--EEEEECCG----
T ss_pred HHHHHHHHHHcCCCEEEecccchhhhCC-------------------CHHHHHHHHHHHHHHHcCC--CceEEEec----
Confidence 3566788889999999998755533221 2345688888999998642 44422211
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
...+.++....++...++|+|||-.+-+.. +.....+..+.+++.+ ++||-++||+ |.+++.++++.| ++
T Consensus 128 --~~l~~e~i~~a~~ia~eaGADfVKTsTGf~----~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~aG-a~ 200 (220)
T 1ub3_A 128 --GYFSPEEIARLAEAAIRGGADFLKTSTGFG----PRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLKAG-AS 200 (220)
T ss_dssp --GGSCHHHHHHHHHHHHHHTCSEEECCCSSS----SCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTT-CS
T ss_pred --CCCCHHHHHHHHHHHHHhCCCEEEeCCCCC----CCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHHCC-Cc
Confidence 122456677788888899999998764321 1122334455566644 5789999999 899999999999 89
Q ss_pred --EEcccHHHHh
Q 017733 318 --LVAFGRLFLA 327 (367)
Q Consensus 318 --~V~~gR~~la 327 (367)
.++.+|.++.
T Consensus 201 RiG~S~g~~I~~ 212 (220)
T 1ub3_A 201 RLGTSSGVALVA 212 (220)
T ss_dssp EEEETTHHHHHC
T ss_pred ccchhHHHHHHH
Confidence 7777776553
No 205
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=97.94 E-value=9.2e-05 Score=69.59 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=45.1
Q ss_pred HHHHHHHHHhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc---hHHHHHh
Q 017733 282 QRSLLSMRRAFEGTFI--AAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD---LPKRFEL 337 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~---l~~k~~~ 337 (367)
...++.+++.+++||+ ++||+ |++++.++++.| +|.|++||+++..++ ..+++++
T Consensus 196 ~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~~~G-adgV~vGsai~~~~~p~~~~~~l~~ 256 (305)
T 2nv1_A 196 YELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLG-ADGVFVGSGIFKSDNPAKFAKAIVE 256 (305)
T ss_dssp HHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHHHTT-CSCEEECGGGGGSSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHHHcC-CCEEEEcHHHHcCCCHHHHHHHHHH
Confidence 4567788888888988 99999 999999999988 999999999997544 4455544
No 206
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.91 E-value=0.00019 Score=65.17 Aligned_cols=132 Identities=13% Similarity=0.057 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHH-h-CCCEEEEec--ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE-EeC
Q 017733 159 NDFRLAARNAIE-A-GFDGVEIHG--ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-RLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~-a-GfdgVei~~--~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-rls 233 (367)
++=++.|++|.| + |-+-|+|-. -+-|| ..-..+.+++.++.+.+....+ -.+
T Consensus 87 ~eAv~~a~lare~~~~~~~iKlEv~~d~~~l-----------------------lpD~~~tv~aa~~L~~~Gf~Vlpy~~ 143 (265)
T 1wv2_A 87 VEAVRTCRLARELLDGHNLVKLEVLADQKTL-----------------------FPNVVETLKAAEQLVKDGFDVMVYTS 143 (265)
T ss_dssp HHHHHHHHHHHTTTTSCCEEEECCBSCTTTC-----------------------CBCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEeecCcccc-----------------------CcCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 456888888888 5 677776543 22111 1124788888888886543222 122
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVA 312 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 312 (367)
. + ..+++++++.|.+++......... .....+.+.++.|++..++|||+.||| ||+++.++++
T Consensus 144 d----------d-----~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Ame 207 (265)
T 1wv2_A 144 D----------D-----PIIARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAME 207 (265)
T ss_dssp S----------C-----HHHHHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHHH
T ss_pred C----------C-----HHHHHHHHHhCCCEEEeCCccCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHH
Confidence 2 1 248899999999998542221111 111234678899999989999999999 9999999999
Q ss_pred cCCCcEEcccHHHHh--CCc
Q 017733 313 ANYTDLVAFGRLFLA--NPD 330 (367)
Q Consensus 313 ~G~~D~V~~gR~~la--dP~ 330 (367)
-| +|.|.++.+... ||.
T Consensus 208 LG-AdgVlVgSAI~~a~dP~ 226 (265)
T 1wv2_A 208 LG-CEAVLMNTAIAHAKDPV 226 (265)
T ss_dssp HT-CSEEEESHHHHTSSSHH
T ss_pred cC-CCEEEEChHHhCCCCHH
Confidence 99 999999999965 564
No 207
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.89 E-value=8.9e-05 Score=66.65 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=90.7
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|+++.--|.|.+ .+...+.+-|.+|+++++..++ |+=.+..+-
T Consensus 83 ~~E~~~Ai~~GAdEIDmVinig~lk~-------------------g~~~~v~~ei~~v~~a~~~~~l--KvIiEt~~L-- 139 (231)
T 3ndo_A 83 ATEAELAVAAGATEIDMVIDVGAALA-------------------GDLDAVSADITAVRKAVRAATL--KVIVESAAL-- 139 (231)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHT-------------------TCHHHHHHHHHHHHHHTTTSEE--EEECCHHHH--
T ss_pred HHHHHHHHHcCCCEEEEEeehHhhhc-------------------ccHHHHHHHHHHHHHHccCCce--EEEEECccc--
Confidence 56678889999999999876554332 2345678889999999974333 332211000
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
.+..+.++....++...++|+|||-.+-+... ......+..+.+++.+ +++|-++||+ |.+++.++|+.| ++-
T Consensus 140 ~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~---~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~aG-a~R 215 (231)
T 3ndo_A 140 LEFSGEPLLADVCRVARDAGADFVKTSTGFHP---SGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAG-ATR 215 (231)
T ss_dssp HHHTCHHHHHHHHHHHHHTTCSEEECCCSCCT---TCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHHTT-CSE
T ss_pred CCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCC---CCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHhc-chh
Confidence 00014566777888888999999987644220 1122345566677766 4679999999 899999999999 895
Q ss_pred EcccHH
Q 017733 319 VAFGRL 324 (367)
Q Consensus 319 V~~gR~ 324 (367)
++..++
T Consensus 216 iGtS~g 221 (231)
T 3ndo_A 216 LGLSGS 221 (231)
T ss_dssp EEESSH
T ss_pred cccchH
Confidence 555443
No 208
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.87 E-value=0.00022 Score=71.13 Aligned_cols=129 Identities=18% Similarity=0.103 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
+..+-+..+.+||.|.|-|..+||| .+..++.++.||+..+.-+|.. =|.
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGh------------------------s~~v~~~i~~ik~~~p~~~via-GNV----- 330 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGN------------------------SVYQIEFIKWIKQTYPKIDVIA-GNV----- 330 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCC------------------------SHHHHHHHHHHHHHCTTSEEEE-EEE-----
T ss_pred cHHHHHHHHHhcCCcEEEEeccccc------------------------cHHHHHHHHHHHhhCCcceEEe-ccc-----
Confidence 3455566677899999999999974 2456899999999986434332 011
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCC---cccc---CCchhhHHHH---HHHHHhcCCcEEEeCCC-CHHHHHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPR---MIQL---TDKSETQRSL---LSMRRAFEGTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~---~~~~---~~~~~~~~~~---~~ir~~~~~pvi~~Ggi-t~~~a~~ 309 (367)
-+. +-++.|.++|+|.+-|.-+. +... .-..++...+ ....+.+.+|||+-||+ ++-+..+
T Consensus 331 -----aT~----e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~K 401 (556)
T 4af0_A 331 -----VTR----EQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAK 401 (556)
T ss_dssp -----CSH----HHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH
T ss_pred -----cCH----HHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHH
Confidence 122 34556778999999885432 1111 1122333333 33445567999999999 7999999
Q ss_pred HHHcCCCcEEcccHHHHhC
Q 017733 310 AVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~lad 328 (367)
+|..| +|+||||..|..-
T Consensus 402 AlaaG-Ad~VMlGsllAGt 419 (556)
T 4af0_A 402 ALALG-ASAVMMGGLLAGT 419 (556)
T ss_dssp HHHTT-CSEEEESTTTTTB
T ss_pred HhhcC-CCEEEEchhhccc
Confidence 99999 9999999877643
No 209
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.84 E-value=0.00022 Score=64.83 Aligned_cols=140 Identities=8% Similarity=0.062 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
...+..+++.++|.|-+.+-.--| .|. |.. .+| .++|+++|+..++.++-+.+-..
T Consensus 41 ~L~~~i~~l~~~G~d~lHvDVmDg----~FV-pni-----t~G----------~~~v~~lr~~~p~~~ldvHLmv~---- 96 (246)
T 3inp_A 41 RLGDDVKAVLAAGADNIHFDVMDN----HYV-PNL-----TFG----------PMVLKALRDYGITAGMDVHLMVK---- 96 (246)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBS----SSS-SCB-----CCC----------HHHHHHHHHHTCCSCEEEEEECS----
T ss_pred hHHHHHHHHHHcCCCEEEEEecCC----CcC-cch-----hcC----------HHHHHHHHHhCCCCeEEEEEeeC----
Confidence 457778888889999665544332 132 211 234 78999999998545666666542
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCC------------------------------------------------
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPR------------------------------------------------ 271 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~------------------------------------------------ 271 (367)
++. .+++.+.++|+|+++++.-.
T Consensus 97 -----~p~----~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~P 167 (246)
T 3inp_A 97 -----PVD----ALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNP 167 (246)
T ss_dssp -----SCH----HHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCT
T ss_pred -----CHH----HHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecC
Confidence 121 13344555666666665200
Q ss_pred -ccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 272 -MIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 272 -~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
+......+....-++++|+.. +.++.+.||++++.+.++++.| +|.+.+|++++..+|...
T Consensus 168 GfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aG-AD~~V~GSaIf~a~dp~~ 234 (246)
T 3inp_A 168 GFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCG-VNAFVAGSAIFNSDSYKQ 234 (246)
T ss_dssp TC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTT-CCEEEESHHHHTSSCHHH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcC-CCEEEEehHHhCCCCHHH
Confidence 000000011123345555543 4678899999999999999999 999999999997666543
No 210
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.84 E-value=5.1e-05 Score=69.83 Aligned_cols=82 Identities=9% Similarity=0.109 Sum_probs=64.9
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
...+..-+..|+.++.+.... .+...+.++.+++.+ ++||+++||| |+++++++++.| +|.|.+|.+++.
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aG-AD~VVVGSAav~ 261 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSG-ADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTT-CSEEEESGGGSS
T ss_pred HHHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcC-CCEEEECchhhc
Confidence 344444467787777665322 334567899999999 8999999999 899999999999 999999999999
Q ss_pred C--CchHHHHHhCC
Q 017733 328 N--PDLPKRFELNA 339 (367)
Q Consensus 328 d--P~l~~k~~~g~ 339 (367)
| |++++++....
T Consensus 262 d~~Pelv~e~a~~~ 275 (286)
T 3vk5_A 262 PDWRSALAEIAGRR 275 (286)
T ss_dssp TTHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHhC
Confidence 9 88988888544
No 211
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.83 E-value=0.00024 Score=71.46 Aligned_cols=127 Identities=16% Similarity=0.165 Sum_probs=83.4
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCC-cceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGA-ERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~-~~i~vrls~~~~~~~ 240 (367)
.+.++.+.++|.+.+.++..+|+ .....+.++.+|+..+. .++.+.--.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~------------------------~~~~~~~i~~lk~~~~~~~~Vi~G~V~------ 293 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGF------------------------SEWQKITIGWIREKYGDKVKVGAGNIV------ 293 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCC------------------------SHHHHHHHHHHHHHHGGGSCEEEEEEC------
T ss_pred HHHHHHHHhhhccceEEecccCc------------------------ccchhhHHHHHHHhCCCCceEeecccc------
Confidence 34466777889999999876641 12357778999999854 344432211
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCC---cccc---CCchhhHHHHHHHHHh---c------CCcEEEeCCC-CH
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPR---MIQL---TDKSETQRSLLSMRRA---F------EGTFIAAGGY-SR 304 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~---~~~~---~~~~~~~~~~~~ir~~---~------~~pvi~~Ggi-t~ 304 (367)
+.+ -++.+.++|+|++.+..+. .... ....+....+..+.+. + ++|||+.||+ ++
T Consensus 294 -----t~~----~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~ 364 (503)
T 1me8_A 294 -----DGE----GFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYD 364 (503)
T ss_dssp -----SHH----HHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSH
T ss_pred -----CHH----HHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCH
Confidence 223 4455678899999874321 1111 1112233444444333 2 6899999999 89
Q ss_pred HHHHHHHHcCCCcEEcccHHHHhC
Q 017733 305 DEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 305 ~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
.++.++|+.| +|+|+|||+++.-
T Consensus 365 ~di~kAlalG-A~~V~iG~~~~~~ 387 (503)
T 1me8_A 365 YHMTLALAMG-ADFIMLGRYFARF 387 (503)
T ss_dssp HHHHHHHHTT-CSEEEESHHHHTB
T ss_pred HHHHHHHHcC-CCEEEECchhhcc
Confidence 9999999999 9999999999754
No 212
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.82 E-value=0.00034 Score=63.04 Aligned_cols=134 Identities=12% Similarity=0.017 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
-+..++.|.+.|.|.|+++.--|.+.+ .+.+-|.+|+++++...+-+|+=....
T Consensus 90 k~~e~~~Av~~GAdEID~vinig~~~~-----------------------~v~~ei~~v~~a~~~~g~~lKvIlEt~--- 143 (234)
T 1n7k_A 90 KLVEAQTVLEAGATELDVVPHLSLGPE-----------------------AVYREVSGIVKLAKSYGAVVKVILEAP--- 143 (234)
T ss_dssp HHHHHHHHHHHTCCEEEECCCGGGCHH-----------------------HHHHHHHHHHHHHHHTTCEEEEECCGG---
T ss_pred HHHHHHHHHHcCCCEEEEeccchHHHH-----------------------HHHHHHHHHHHHHhhcCCeEEEEEecc---
Confidence 356678888999999999874442222 456777788888753212223322111
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHH--HHHhcCCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLS--MRRAFEGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~--ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
..+.++....++...++|+|||-.+-+... . .....+..+. +++.+.+||-+.||+ |.+++.++++.| ++
T Consensus 144 ---~L~~e~i~~a~ria~eaGADfVKTsTG~~~-~--~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i~aG-a~ 216 (234)
T 1n7k_A 144 ---LWDDKTLSLLVDSSRRAGADIVKTSTGVYT-K--GGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAVGAG-AD 216 (234)
T ss_dssp ---GSCHHHHHHHHHHHHHTTCSEEESCCSSSC-C--CCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHHHTT-CS
T ss_pred ---CCCHHHHHHHHHHHHHhCCCEEEeCCCCCC-C--CCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHHHcC-cc
Confidence 123466777888888999999987543211 0 1223334455 777777899999999 899999999999 89
Q ss_pred --EEcccHHHHh
Q 017733 318 --LVAFGRLFLA 327 (367)
Q Consensus 318 --~V~~gR~~la 327 (367)
.++.+|.++.
T Consensus 217 RiG~S~g~~I~~ 228 (234)
T 1n7k_A 217 IIGTSSAVKVLE 228 (234)
T ss_dssp EEEETTHHHHHH
T ss_pred ccchHHHHHHHH
Confidence 6666666553
No 213
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.82 E-value=0.00012 Score=65.96 Aligned_cols=128 Identities=13% Similarity=0.201 Sum_probs=81.9
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
..+.++|.|+|-+|..+. -+| ...++++.+|+. | ..+++=+++..
T Consensus 79 ~~~~~aGadgv~vh~e~~-------------~~~-----------~~~~~~~~i~~~-g-~~~gv~~~p~t--------- 123 (230)
T 1tqj_A 79 EDFAKAGADIISVHVEHN-------------ASP-----------HLHRTLCQIREL-G-KKAGAVLNPST--------- 123 (230)
T ss_dssp HHHHHHTCSEEEEECSTT-------------TCT-----------THHHHHHHHHHT-T-CEEEEEECTTC---------
T ss_pred HHHHHcCCCEEEECcccc-------------cch-----------hHHHHHHHHHHc-C-CcEEEEEeCCC---------
Confidence 566788999999997531 011 245677777663 2 25677667631
Q ss_pred hHHHHHHHHHHhhhcCccEEEEec--CCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIE--PRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
+.+ ..+.+. .++||+-+.. +++......+.....++.+|+.. +.||.+.||++.+.+.++++.| +|.
T Consensus 124 ~~e----~~~~~~-~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~~~~~~aG-ad~ 197 (230)
T 1tqj_A 124 PLD----FLEYVL-PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAG-ANA 197 (230)
T ss_dssp CGG----GGTTTG-GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHT-CCE
T ss_pred cHH----HHHHHH-hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHHHHHHHcC-CCE
Confidence 222 112222 2688885532 22222112233456677777776 7899999999989999999999 999
Q ss_pred EcccHHHHhCCchHHH
Q 017733 319 VAFGRLFLANPDLPKR 334 (367)
Q Consensus 319 V~~gR~~ladP~l~~k 334 (367)
+.+|++++..||....
T Consensus 198 vvvGSai~~a~d~~~~ 213 (230)
T 1tqj_A 198 IVAGSAVFNAPNYAEA 213 (230)
T ss_dssp EEESHHHHTSSCHHHH
T ss_pred EEECHHHHCCCCHHHH
Confidence 9999999987774333
No 214
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=97.80 E-value=3.4e-05 Score=70.98 Aligned_cols=83 Identities=12% Similarity=0.013 Sum_probs=64.9
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc----CCcEEEeCCC-CHHHHHHHHHc--CCCcEEcccHH
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF----EGTFIAAGGY-SRDEGNKAVAA--NYTDLVAFGRL 324 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~----~~pvi~~Ggi-t~~~a~~~L~~--G~~D~V~~gR~ 324 (367)
++++.++++ ++.+-++..+.......+ +.+.++.+++.+ ++|||++||+ +++++.++++. | +|.|++||+
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G-~~gvivg~a 238 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHG-KVDLTFGSS 238 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTT-CEEEECCTT
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCC-CCEEEeeCC
Confidence 588889999 999988876654444333 778899999999 9999999999 89999999988 6 999999999
Q ss_pred H--HhCC-chHHHHHh
Q 017733 325 F--LANP-DLPKRFEL 337 (367)
Q Consensus 325 ~--ladP-~l~~k~~~ 337 (367)
+ +..| ..+..+++
T Consensus 239 l~l~~g~~~~~~~~~~ 254 (260)
T 2agk_A 239 LDIFGGNLVKFEDCCR 254 (260)
T ss_dssp BGGGTCSSBCHHHHHH
T ss_pred HHHcCCCCCCHHHHHH
Confidence 6 8888 66665543
No 215
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=97.80 E-value=0.00062 Score=62.88 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=82.4
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
...|.++|.|+|-|..+. |+ ..-+.++++..++ .|-+ +.+-++
T Consensus 128 v~~A~~~GAD~VlLi~a~-------l~-----------------~~~l~~l~~~a~~-lGl~-~lvev~----------- 170 (272)
T 3qja_A 128 IHEARAHGADMLLLIVAA-------LE-----------------QSVLVSMLDRTES-LGMT-ALVEVH----------- 170 (272)
T ss_dssp HHHHHHTTCSEEEEEGGG-------SC-----------------HHHHHHHHHHHHH-TTCE-EEEEES-----------
T ss_pred HHHHHHcCCCEEEEeccc-------CC-----------------HHHHHHHHHHHHH-CCCc-EEEEcC-----------
Confidence 345557999999986543 11 1234566666665 4432 333332
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
+.++.. ...+.|+|+|-+...+.... ......+..+.+.+ ++||++.||| |++++.++++.| +|.|.+
T Consensus 171 -t~ee~~----~A~~~Gad~IGv~~r~l~~~---~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~G-adgvlV 241 (272)
T 3qja_A 171 -TEQEAD----RALKAGAKVIGVNARDLMTL---DVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAG-ADAVLV 241 (272)
T ss_dssp -SHHHHH----HHHHHTCSEEEEESBCTTTC---CBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTT-CSEEEE
T ss_pred -CHHHHH----HHHHCCCCEEEECCCccccc---ccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcC-CCEEEE
Confidence 133322 22356999999875433221 12334566777777 5899999999 699999999999 999999
Q ss_pred cHHHHhCCchHHHHH
Q 017733 322 GRLFLANPDLPKRFE 336 (367)
Q Consensus 322 gR~~ladP~l~~k~~ 336 (367)
|++++..+|.-..++
T Consensus 242 Gsal~~a~dp~~~~~ 256 (272)
T 3qja_A 242 GEGLVTSGDPRAAVA 256 (272)
T ss_dssp CHHHHTCSCHHHHHH
T ss_pred cHHHhCCCCHHHHHH
Confidence 999998777544433
No 216
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=97.80 E-value=0.00054 Score=67.16 Aligned_cols=118 Identities=15% Similarity=0.136 Sum_probs=86.3
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCCh
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~ 246 (367)
+++.||..+++..+.| ++ ||. ...+--.+.|++||+++|++ .|.+..|. ..+
T Consensus 182 ~~~~G~~~~KiK~g~g---------------~~-~G~--~~~~~d~~~v~avrea~G~~~~L~vDaN~---------~~~ 234 (415)
T 2p3z_A 182 AKEMGFIGGKMPTHWG---------------PH-DGD--AGIRKDAAMVADMREKCGPDFWLMLDCWM---------SQD 234 (415)
T ss_dssp HHHHTCSEEEEECCCC---------------GG-GHH--HHHHHHHHHHHHHHHHHCSSSEEEEECTT---------CCC
T ss_pred HHHhCcceEEEecccC---------------cc-ccc--ccHHHHHHHHHHHHHHhCCCCEEEEECCC---------CCC
Confidence 3568999999875321 11 121 12445688999999999876 56666554 235
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.+++.++++.|++.++.||+ ++. .+.+....+.+++.++ +||++...+ ++.++.++++.+ +|+|.+
T Consensus 235 ~~~Ai~~~~~l~~~~i~~iE--qPl------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 235 VNYATKLAHACAPFNLKWIE--ECL------PPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp HHHHHHHHHHHGGGTCCEEE--CCS------CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred HHHHHHHHHHHhhcCCceEe--CCC------CcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 78899999999999999988 442 1234566777898887 787777777 899999999999 999876
No 217
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.77 E-value=9e-05 Score=66.54 Aligned_cols=130 Identities=16% Similarity=0.235 Sum_probs=79.2
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
.++.+.++|.|+|-+|...+ + .+ ...++++++++. | ..+++=+++..
T Consensus 83 ~v~~~~~~Gad~v~vh~~~~--------~-----~~-----------~~~~~~~~~~~~-g-~~ig~~~~p~t------- 129 (230)
T 1rpx_A 83 RVPDFIKAGADIVSVHCEQS--------S-----TI-----------HLHRTINQIKSL-G-AKAGVVLNPGT------- 129 (230)
T ss_dssp HHHHHHHTTCSEEEEECSTT--------T-----CS-----------CHHHHHHHHHHT-T-SEEEEEECTTC-------
T ss_pred HHHHHHHcCCCEEEEEecCc--------c-----ch-----------hHHHHHHHHHHc-C-CcEEEEeCCCC-------
Confidence 44555679999999997510 0 01 135677777764 3 24565555421
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEec--CCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHHHHHHcCCC
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIE--PRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGNKAVAANYT 316 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~--~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~ 316 (367)
+.+. ++.+ ..++||+-+.. +.+......+.....++.+|+.+ +.|+++.||++++++.++++.| +
T Consensus 130 --~~e~----~~~~-~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aG-a 201 (230)
T 1rpx_A 130 --PLTA----IEYV-LDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAG-A 201 (230)
T ss_dssp --CGGG----GTTT-TTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHT-C
T ss_pred --CHHH----HHHH-HhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcC-C
Confidence 1111 1112 24688884322 11211111122234456677766 6899999999999999999988 9
Q ss_pred cEEcccHHHHhCCchHHH
Q 017733 317 DLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 317 D~V~~gR~~ladP~l~~k 334 (367)
|.|.+|++++..+|....
T Consensus 202 d~vvvgSaI~~a~dp~~a 219 (230)
T 1rpx_A 202 NALVAGSAVFGAPDYAEA 219 (230)
T ss_dssp CEEEESHHHHTSSCHHHH
T ss_pred CEEEEChhhhCCCCHHHH
Confidence 999999999987775433
No 218
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.77 E-value=0.00022 Score=63.31 Aligned_cols=126 Identities=15% Similarity=0.184 Sum_probs=78.3
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
+.+.++|.|+|-+|+..+ ....++++++++. | ..+++=+++..
T Consensus 78 ~~~~~~gad~v~vh~~~~--------------------------~~~~~~~~~~~~~-g-~~i~~~~~~~t--------- 120 (220)
T 2fli_A 78 EAFAQAGADIMTIHTEST--------------------------RHIHGALQKIKAA-G-MKAGVVINPGT--------- 120 (220)
T ss_dssp HHHHHHTCSEEEEEGGGC--------------------------SCHHHHHHHHHHT-T-SEEEEEECTTS---------
T ss_pred HHHHHcCCCEEEEccCcc--------------------------ccHHHHHHHHHHc-C-CcEEEEEcCCC---------
Confidence 667789999999997541 1134666777664 3 24555555421
Q ss_pred hHHHHHHHHHHhhhcCccEEEEe--cCCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 246 PEALGLYMAKALNKFKLLYLHVI--EPRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
+.+ .++.+. .++||+-+. .+.+......+.....++.+++.. +.|+++.||++++++.++++.| +|.
T Consensus 121 ~~e----~~~~~~-~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~~~~~~~~~~G-ad~ 194 (220)
T 2fli_A 121 PAT----ALEPLL-DLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAG-ANV 194 (220)
T ss_dssp CGG----GGGGGT-TTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHT-CCE
T ss_pred CHH----HHHHHH-hhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCHHHHHHHHHcC-CCE
Confidence 111 112222 347887431 222221111222234455666655 6889999999999999988888 999
Q ss_pred EcccHHHHhCCchHHH
Q 017733 319 VAFGRLFLANPDLPKR 334 (367)
Q Consensus 319 V~~gR~~ladP~l~~k 334 (367)
|.+||+++..+|....
T Consensus 195 vvvGsai~~~~d~~~a 210 (220)
T 2fli_A 195 FVAGSYLFKASDLVSQ 210 (220)
T ss_dssp EEESHHHHTSSCHHHH
T ss_pred EEEChHHhCCCCHHHH
Confidence 9999999988775443
No 219
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.75 E-value=4.1e-05 Score=70.23 Aligned_cols=87 Identities=13% Similarity=-0.041 Sum_probs=68.3
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHH-h
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFL-A 327 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l-a 327 (367)
..++++.+++.|++.|+++........ ...+...++.+++.+++||++.|++ ++++++++++.| +|.|.+++.++ .
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~d~~~~~~~-~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~G-ad~v~lg~~~~~~ 109 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADKALAASVFHFR 109 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTTSSCS-SCCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHT-CSEEECCCCC---
T ss_pred HHHHHHHHHHCCCCEEEEEecCcccCC-CcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-CcHhhhhHHHHhC
Confidence 456888999999999999765432211 2235677888999999999999999 799999999998 99999999999 5
Q ss_pred --CCchHHHHHhC
Q 017733 328 --NPDLPKRFELN 338 (367)
Q Consensus 328 --dP~l~~k~~~g 338 (367)
+|++.+++.+.
T Consensus 110 ~~~~~~~~~~~~~ 122 (266)
T 2w6r_A 110 EIDMRELKEYLKK 122 (266)
T ss_dssp ---CHHHHHHCC-
T ss_pred CCCHHHHHHHHHH
Confidence 99999998643
No 220
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.74 E-value=0.00064 Score=63.79 Aligned_cols=143 Identities=17% Similarity=0.107 Sum_probs=84.2
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCC-c-ceEEEeCCCccccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGA-E-RVGMRLSPYAECAE 240 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~-~-~i~vrls~~~~~~~ 240 (367)
..++.|+++|+|+|.+++-. |.|. +-... ++.++++.+++-. . ++.+-+-+... .
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~--------------~~d~---~~~~~----~~~i~~v~~~~~~~G~p~lv~~~~~g~--~ 168 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLW--------------RSDE---DAQQR----LNMVKEFNELCHSNGLLSIIEPVVRPP--R 168 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEE--------------CTTS---CHHHH----HHHHHHHHHHHHTTTCEEEEEEEECCC--S
T ss_pred hhHHHHHHcCCCEEEEEEEc--------------CCCc---cHHHH----HHHHHHHHHHHHHcCCcEEEEEECCCC--c
Confidence 34567788999999987633 2110 00222 3344444444422 2 55554432111 1
Q ss_pred cCCCChH-HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh----cCCc-EEEeCCCCH----HHHHHH
Q 017733 241 AVDSNPE-ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA----FEGT-FIAAGGYSR----DEGNKA 310 (367)
Q Consensus 241 ~~~~~~~-~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~----~~~p-vi~~Ggit~----~~a~~~ 310 (367)
....... +...+.++.+.+.|+||+-+..+... . . ....++.+.+. +++| |++.||++. +.+..+
T Consensus 169 v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~-~-g---~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a 243 (304)
T 1to3_A 169 CGDKFDREQAIIDAAKELGDSGADLYKVEMPLYG-K-G---ARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVA 243 (304)
T ss_dssp SCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGG-C-S---CHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHH
T ss_pred cccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCC-C-C---CHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHH
Confidence 1112223 44556688888999999987643221 0 1 22333334444 7889 999999965 558888
Q ss_pred HHcCCCcEEcccHHHHhC----CchHHH
Q 017733 311 VAANYTDLVAFGRLFLAN----PDLPKR 334 (367)
Q Consensus 311 L~~G~~D~V~~gR~~lad----P~l~~k 334 (367)
++.| ++.|.+||..... ++....
T Consensus 244 ~~aG-a~Gv~vGRaI~q~~~~~~dp~~~ 270 (304)
T 1to3_A 244 MEAG-ASGFLAGRAVWSSVIGLPDTELM 270 (304)
T ss_dssp HHTT-CCEEEESHHHHGGGTTCSCHHHH
T ss_pred HHcC-CeEEEEehHHhCccccCCCHHHH
Confidence 8887 8999999999988 754333
No 221
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=97.74 E-value=8.9e-05 Score=69.61 Aligned_cols=47 Identities=23% Similarity=0.276 Sum_probs=41.4
Q ss_pred HHHHHHHHhcCCcE--EEeCCC-CHHHHHHHHHcCCCcEEcccHHHH--hCCc
Q 017733 283 RSLLSMRRAFEGTF--IAAGGY-SRDEGNKAVAANYTDLVAFGRLFL--ANPD 330 (367)
Q Consensus 283 ~~~~~ir~~~~~pv--i~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l--adP~ 330 (367)
+.++.+++..++|| ++.||| |++++.++++.| +|.|+++|+++ .||.
T Consensus 230 ell~~i~~~~~IPVV~VAeGGI~Tpeda~~~l~~G-aDgV~VGsaI~~a~dP~ 281 (330)
T 2yzr_A 230 EVLLEVKKLGRLPVVNFAAGGVATPADAALMMQLG-SDGVFVGSGIFKSENPL 281 (330)
T ss_dssp HHHHHHHHHTSCSSEEEECSCCCSHHHHHHHHHTT-CSCEEESHHHHTSSCHH
T ss_pred HHHHHHHHhCCCCeEEEEECCCCCHHHHHHHHHcC-cCEEeeHHHHhcCCCHH
Confidence 66788888888897 699999 899999999998 99999999999 5553
No 222
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.72 E-value=0.00034 Score=64.07 Aligned_cols=158 Identities=15% Similarity=0.107 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEeccc------chHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE--
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGAN------GYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-- 230 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~------gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-- 230 (367)
+.+.+.++.+.++|+|.|||...+ |..+.. .+.|.-+.|- +.....++++++|+.+. .||.+
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~-----a~~~al~~g~----~~~~~~~~i~~ir~~~~-~Pv~~m~ 101 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQA-----SVARALASGT----TMDAVLEMLREVTPELS-CPVVLLS 101 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHH-----HHHHHHTTTC----CHHHHHHHHHHHGGGCS-SCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHH-----HHHHHHHcCC----CHHHHHHHHHHHHhcCC-CCEEEEe
Confidence 567888888999999999996432 111111 1112212221 35678899999998853 35443
Q ss_pred EeCCCc--c---c-----ccc-CCCChHHHHHHHHHHhhhcCccEEEEecC------------------------Ccccc
Q 017733 231 RLSPYA--E---C-----AEA-VDSNPEALGLYMAKALNKFKLLYLHVIEP------------------------RMIQL 275 (367)
Q Consensus 231 rls~~~--~---~-----~~~-~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~------------------------~~~~~ 275 (367)
+.++.. . . ++. ..+.+.++...+.+.+.+.|++.+.+..+ .+...
T Consensus 102 ~~~~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~ 181 (262)
T 1rd5_A 102 YYKPIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGP 181 (262)
T ss_dssp CSHHHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCT
T ss_pred cCcHHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCC
Confidence 333210 0 0 000 01122223334444444444443221111 00100
Q ss_pred --CCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 276 --TDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 276 --~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
...+.....++.+++.+++||++.||+ |++++.++++.| +|.|.+|.+++.
T Consensus 182 ~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~G-AdgvvVGSai~~ 235 (262)
T 1rd5_A 182 RANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWG-ADGVIIGSAMVR 235 (262)
T ss_dssp TSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHH
T ss_pred CcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcC-CCEEEEChHHHh
Confidence 011223356788999889999999999 599999999998 999999998774
No 223
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=97.71 E-value=0.00062 Score=63.55 Aligned_cols=47 Identities=19% Similarity=0.233 Sum_probs=40.7
Q ss_pred HHHHHHHHhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 283 RSLLSMRRAFEGTFI--AAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 283 ~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
..++.+++.+++||+ +.||+ |++++.++++.| +|.|.+|++++..++
T Consensus 197 ~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~~~G-AdgVlVGsai~~a~d 246 (297)
T 4adt_A 197 DLILLTRKLKRLPVVNFAAGGIATPADAAMCMQLG-MDGVFVGSGIFESEN 246 (297)
T ss_dssp HHHHHHHHHTSCSSEEEEESCCCSHHHHHHHHHTT-CSCEEESHHHHTSSC
T ss_pred HHHHHHHHhcCCCeEEEecCCCCCHHHHHHHHHcC-CCEEEEhHHHHcCCC
Confidence 456778888888865 89999 999999999999 999999999998554
No 224
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.69 E-value=5.2e-05 Score=69.01 Aligned_cols=84 Identities=13% Similarity=0.123 Sum_probs=69.6
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
++++.+.+.|+|.+|+..-... ......+...++.+.+.+.+|+..+||+ +.++++++|..| +|-|.++..++.||+
T Consensus 35 ~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~G-adkVii~t~a~~~p~ 112 (243)
T 4gj1_A 35 KKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCG-VKRVVIGSMAIKDAT 112 (243)
T ss_dssp HHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTT-CSEEEECTTTTTCHH
T ss_pred HHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcC-CCEEEEccccccCCc
Confidence 3677888999999998643211 1123445678889999999999999999 899999999999 999999999999999
Q ss_pred hHHHHHh
Q 017733 331 LPKRFEL 337 (367)
Q Consensus 331 l~~k~~~ 337 (367)
|+.++.+
T Consensus 113 li~e~~~ 119 (243)
T 4gj1_A 113 LCLEILK 119 (243)
T ss_dssp HHHHHHH
T ss_pred hHHHHHh
Confidence 9988765
No 225
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.62 E-value=0.00025 Score=63.58 Aligned_cols=83 Identities=10% Similarity=0.095 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHH
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~ 324 (367)
.++....+..-+-.|..++.+.. .- . ..+.+.++++++.+ ++||+.+||| |++++++++ .| +|.|.+|.+
T Consensus 139 ~e~~~~~a~~a~~~g~~~VYld~-sG--~---~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~g-AD~VVVGSa 210 (228)
T 3vzx_A 139 MDDIVAYARVSELLQLPIFYLEY-SG--V---LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EH-ADVIVVGNA 210 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TT--S---CCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TT-CSEEEECTH
T ss_pred HHHHHHHHHHHHHcCCCEEEecC-CC--C---cCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hC-CCEEEEChH
Confidence 45566666665656777776644 11 1 11567889999999 7999999999 899999998 67 999999999
Q ss_pred HHhCCchHHHHHh
Q 017733 325 FLANPDLPKRFEL 337 (367)
Q Consensus 325 ~ladP~l~~k~~~ 337 (367)
+..||++.+++.+
T Consensus 211 ~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 211 VYEDFDRALKTVA 223 (228)
T ss_dssp HHHCHHHHHHHHH
T ss_pred HhcCHHHHHHHHH
Confidence 9999999988765
No 226
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=97.62 E-value=0.00082 Score=62.70 Aligned_cols=201 Identities=13% Similarity=0.102 Sum_probs=126.5
Q ss_pred HHhhcCCCeeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccC
Q 017733 51 YSQRTTNGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISST 130 (367)
Q Consensus 51 y~~~a~g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps 130 (367)
..+.+ |.-.|.++...+.-...+++....+.-++.+...+++++.+. .++++++-. | ++
T Consensus 32 ~~~~a-G~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~---~PviaD~d~------------G---yg-- 90 (295)
T 1xg4_A 32 LAQRA-GYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCS---LPLLVDADI------------G---FG-- 90 (295)
T ss_dssp HHHHT-TCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCC---SCEEEECTT------------C---SS--
T ss_pred HHHHc-CCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCC---CCEEecCCc------------c---cC--
Confidence 33444 566677776655433345554434444666777777776653 467766621 1 11
Q ss_pred CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCc-hhhHh
Q 017733 131 SKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGS-LENRC 209 (367)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs-~enr~ 209 (367)
..| ++..+.+++..++|++||.|..+.+ .+|....||. +....
T Consensus 91 -------------~~~------------~~~~~~v~~l~~aGa~gv~iEd~~~-----------~k~cgH~~gk~L~p~~ 134 (295)
T 1xg4_A 91 -------------SSA------------FNVARTVKSMIKAGAAGLHIEDQVG-----------AKRSGHRPNKAIVSKE 134 (295)
T ss_dssp -------------SSH------------HHHHHHHHHHHHHTCSEEEEECBCS-----------SCCCTTSSSCCBCCHH
T ss_pred -------------CCH------------HHHHHHHHHHHHcCCeEEEECCCCC-----------CcccCCCCCCccCCHH
Confidence 012 4567888888899999999998872 4777777765 44333
Q ss_pred HHHHHHHHHHHHHh-CCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHH
Q 017733 210 RFALEVVEAVVREI-GAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLS 287 (367)
Q Consensus 210 r~~~eii~aiR~~v-g~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ 287 (367)
.+ .+-|++++++. +.+ .|.-|.... . ....+++++-++.++++|+|.|-+... +..+.++.
T Consensus 135 ~~-~~~I~Aa~~a~~~~~~~i~aRtda~--~-----~~gl~~ai~ra~ay~eAGAd~i~~e~~---------~~~~~~~~ 197 (295)
T 1xg4_A 135 EM-VDRIRAAVDAKTDPDFVIMARTDAL--A-----VEGLDAAIERAQAYVEAGAEMLFPEAI---------TELAMYRQ 197 (295)
T ss_dssp HH-HHHHHHHHHHCSSTTSEEEEEECCH--H-----HHCHHHHHHHHHHHHHTTCSEEEETTC---------CSHHHHHH
T ss_pred HH-HHHHHHHHHhccCCCcEEEEecHHh--h-----hcCHHHHHHHHHHHHHcCCCEEEEeCC---------CCHHHHHH
Confidence 33 44455555554 333 455566431 1 112577888999999999998876422 23466888
Q ss_pred HHHhcCCcEEEeCC---CCHH-HHHHHHHcCCCcEEcccHHHH
Q 017733 288 MRRAFEGTFIAAGG---YSRD-EGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 288 ir~~~~~pvi~~Gg---it~~-~a~~~L~~G~~D~V~~gR~~l 326 (367)
+.+.+++|+++|.- .++. ..+++-+.| +++|+++..++
T Consensus 198 i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G-~~~v~~~~~~~ 239 (295)
T 1xg4_A 198 FADAVQVPILANITEFGATPLFTTDELRSAH-VAMALYPLSAF 239 (295)
T ss_dssp HHHHHCSCBEEECCSSSSSCCCCHHHHHHTT-CSEEEESSHHH
T ss_pred HHHHcCCCEEEEecccCCCCCCCHHHHHHcC-CCEEEEChHHH
Confidence 99999999877643 2332 345666677 99999998876
No 227
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.59 E-value=0.00021 Score=64.44 Aligned_cols=49 Identities=12% Similarity=0.295 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCch
Q 017733 281 TQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 281 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l 331 (367)
..+.++++++.+ ++||+.+||| |+++++++++ | +|.|.+|.+++.+|+-
T Consensus 177 ~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-g-Ad~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 177 NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-Y-ADTIIVGNVIYEKGID 227 (234)
T ss_dssp CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-H-SSEEEECHHHHHHCHH
T ss_pred hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-C-CCEEEEChHHHhCHHH
Confidence 456788999999 9999999999 8999999998 7 9999999999998853
No 228
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.57 E-value=0.00016 Score=64.51 Aligned_cols=123 Identities=15% Similarity=0.052 Sum_probs=76.7
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE-EeCCCccccccCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-RLSPYAECAEAVDS 244 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-rls~~~~~~~~~~~ 244 (367)
+.+.++|.|+|-+|+..+ ...+.++++++|+. |- ..++ =+++ .
T Consensus 77 ~~~~~aGad~i~vh~~~~-------------------------~~~~~~~~~~~~~~-g~-~~~~d~l~~---------~ 120 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAH-------------------------IATIAACKKVADEL-NG-EIQIEIYGN---------W 120 (218)
T ss_dssp HHHHHHTCSEEEEETTSC-------------------------HHHHHHHHHHHHHH-TC-EEEEECCSS---------C
T ss_pred HHHHhcCCCEEEEecCCC-------------------------HHHHHHHHHHHHHh-CC-ccceeeeec---------C
Confidence 566789999999997431 12345677777764 32 2333 2333 1
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
+.++.. .+.+.|+||+-+..+.-....+.......++.+|+.. +.|+++.||++++.+.++++.| +|.|.+|
T Consensus 121 -T~~~~~----~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~~~~~~~~~~aG-Ad~vvvG 194 (218)
T 3jr2_A 121 -TMQDAK----AWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVPEDIYLFEGIK-TKTFIAG 194 (218)
T ss_dssp -CHHHHH----HHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-EEEEEES
T ss_pred -CHHHHH----HHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHcC-CCEEEEc
Confidence 223332 2345599998653321111111111233455566653 7899999999999999999999 9999999
Q ss_pred HHHHhCCc
Q 017733 323 RLFLANPD 330 (367)
Q Consensus 323 R~~ladP~ 330 (367)
|+++..+|
T Consensus 195 saI~~a~d 202 (218)
T 3jr2_A 195 RALAGAEG 202 (218)
T ss_dssp GGGSHHHH
T ss_pred hhhcCCCC
Confidence 99886444
No 229
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=97.57 E-value=0.00025 Score=67.56 Aligned_cols=115 Identities=9% Similarity=0.063 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+++++.|+.+.+ ||..++++.+.. . -.+.|++||++++ ..|.|..|.
T Consensus 136 e~~~~~a~~~~~-g~~~~K~Kvg~~--------------~-------------d~~~v~avR~~~~-~~l~vDaN~---- 182 (338)
T 3ijl_A 136 DVVRAKTKECAG-LFNILKVKLGRD--------------N-------------DKEMIETIRSVTD-LPIAVDANQ---- 182 (338)
T ss_dssp HHHHHHHHHHHT-TCSSEEEECSSS--------------C-------------HHHHHHHHHTTCC-CCEEEECTT----
T ss_pred HHHHHHHHHHHh-cccEEEEecCcH--------------H-------------HHHHHHHHHhhcC-CcEEEECcC----
Confidence 344555555554 999999987531 1 3778999999985 345555544
Q ss_pred cccCCCC-hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 239 AEAVDSN-PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 239 ~~~~~~~-~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
.. +.+++.++++.|++.++.|++ ++. .+.+....+.+++.+++||.+...+ +..++.+++ +.+
T Consensus 183 -----~~t~~~~A~~~~~~l~~~~i~~iE--eP~------~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~ 247 (338)
T 3ijl_A 183 -----GWKDRQYALDMIHWLKEKGIVMIE--QPM------PKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAF 247 (338)
T ss_dssp -----CCCCHHHHHHHHHHHHHTTEEEEE--CCS------CTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTB
T ss_pred -----CCCCHHHHHHHHHHHhhCCCCEEE--CCC------CCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhC
Confidence 34 377899999999999999987 442 1224566788999999999998887 788877765 568
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 248 d~i~~ 252 (338)
T 3ijl_A 248 TGINI 252 (338)
T ss_dssp SEEEE
T ss_pred CEEEe
Confidence 88753
No 230
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=97.54 E-value=0.00018 Score=68.61 Aligned_cols=107 Identities=7% Similarity=-0.031 Sum_probs=77.6
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~ 244 (367)
+.+++.||..++|..+ .+ -.+.|++||+++ ++ .|.|..|. .
T Consensus 135 ~~~~~~G~~~~KiKvg---------------------------~~-d~~~v~avr~~~-~~~~l~vDaN~---------~ 176 (342)
T 2okt_A 135 ESLKATKPTRIKLKWT---------------------------PQ-IMHQIRVLRELD-FHFQLVIDANE---------S 176 (342)
T ss_dssp HHHHHHCCSEEEEECC---------------------------TT-HHHHHHHHTTSS-SCCEEEEECTT---------C
T ss_pred HHHHHcCCcEEEEEeC---------------------------HH-HHHHHHHHHHhC-CCCeEEEECCC---------C
Confidence 4455689999999763 13 378999999999 55 56666554 2
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.+.+++ ++++.|++.++.||+ +|.. +.+....+. +.+++||.+...+ +.+++.++++.+.+|+|.+
T Consensus 177 ~~~~~A-~~~~~l~~~~i~~iE--qP~~------~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~ 243 (342)
T 2okt_A 177 LDRQDF-TQLQLLAREQVLYIE--EPFK------DISMLDEVA--DGTIPPIALDEKATSLLDIINLIELYNVKVVVL 243 (342)
T ss_dssp CCGGGH-HHHHHHGGGCEEEEE--CCCS------SGGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEE
T ss_pred CCHHHH-HHHHHHhhCCCcEEE--CCCC------CccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEE
Confidence 345678 999999999999988 4421 111122222 4567899988887 8999999999999998865
No 231
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.53 E-value=0.0021 Score=59.90 Aligned_cols=129 Identities=8% Similarity=-0.006 Sum_probs=79.0
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc--ceEEEeCCCcccccc
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE--RVGMRLSPYAECAEA 241 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~--~i~vrls~~~~~~~~ 241 (367)
.++.|.+.|+|+|.++.-- +.+. ..-.++-+.++++.+... ++.+- .+ .+.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~--------------Gs~~--------~~~~l~~i~~v~~~a~~~GlpvIie-~~----~G~ 182 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYI--------------GSEY--------EHQSIKNIIQLVDAGMKVGMPTMAV-TG----VGK 182 (295)
T ss_dssp CHHHHHHTTCSEEEEEECT--------------TSTT--------HHHHHHHHHHHHHHHHTTTCCEEEE-EC----C--
T ss_pred HHHHHHHCCCCEEEEEEEC--------------CCCc--------HHHHHHHHHHHHHHHHHcCCEEEEE-CC----CCC
Confidence 3556678999999987532 2111 122344455555555322 44442 11 110
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC--CH----HHHHHHHHcCC
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY--SR----DEGNKAVAANY 315 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~----~~a~~~L~~G~ 315 (367)
......+.....++...++|+|||-+.-. . +.++++.+..++||++.||. +. +.+.++++.|
T Consensus 183 ~~~~d~e~i~~aariA~elGAD~VKt~~t------~-----e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aG- 250 (295)
T 3glc_A 183 DMVRDQRYFSLATRIAAEMGAQIIKTYYV------E-----KGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQG- 250 (295)
T ss_dssp --CCSHHHHHHHHHHHHHTTCSEEEEECC------T-----TTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTT-
T ss_pred ccCCCHHHHHHHHHHHHHhCCCEEEeCCC------H-----HHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhC-
Confidence 00112333345777778899999987511 1 12566777788999999998 33 3466778888
Q ss_pred CcEEcccHHHHhCCch
Q 017733 316 TDLVAFGRLFLANPDL 331 (367)
Q Consensus 316 ~D~V~~gR~~ladP~l 331 (367)
++.|.+||.++..|+-
T Consensus 251 A~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 251 ASGVDMGRNIFQSDHP 266 (295)
T ss_dssp CSEEEESHHHHTSSSH
T ss_pred CeEEEeHHHHhcCcCH
Confidence 9999999999987764
No 232
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.48 E-value=0.00025 Score=63.60 Aligned_cols=111 Identities=11% Similarity=0.096 Sum_probs=78.5
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~ 240 (367)
.+.++.|.++|.|+| |.++ +| .++++..|+ .|.. .+++ .
T Consensus 79 ~d~~~~A~~aGAd~v--~~p~---------------~d-------------~~v~~~ar~-~g~~~i~Gv--~------- 118 (224)
T 1vhc_A 79 AEQVVLAKSSGADFV--VTPG---------------LN-------------PKIVKLCQD-LNFPITPGV--N------- 118 (224)
T ss_dssp HHHHHHHHHHTCSEE--ECSS---------------CC-------------HHHHHHHHH-TTCCEECEE--C-------
T ss_pred HHHHHHHHHCCCCEE--EECC---------------CC-------------HHHHHHHHH-hCCCEEecc--C-------
Confidence 467888999999999 3322 12 678888888 7654 3442 1
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
+.++. ....+.|+||+-+.. .........++.++..+ ++|+++.||++++.+.++++.|.++.|
T Consensus 119 -----t~~e~----~~A~~~Gad~vk~Fp------a~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v 183 (224)
T 1vhc_A 119 -----NPMAI----EIALEMGISAVKFFP------AEASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVAC 183 (224)
T ss_dssp -----SHHHH----HHHHHTTCCEEEETT------TTTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCE
T ss_pred -----CHHHH----HHHHHCCCCEEEEee------CccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEE
Confidence 12332 234578999998831 11111256788899988 689999999999999999999559999
Q ss_pred cccHHHHhC
Q 017733 320 AFGRLFLAN 328 (367)
Q Consensus 320 ~~gR~~lad 328 (367)
+ ++.++..
T Consensus 184 ~-gS~i~~~ 191 (224)
T 1vhc_A 184 G-GSWFVEK 191 (224)
T ss_dssp E-ECGGGCH
T ss_pred E-EchhcCc
Confidence 9 8777653
No 233
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.47 E-value=0.00061 Score=75.26 Aligned_cols=104 Identities=10% Similarity=0.015 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc---cC-----CchhhH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ---LT-----DKSETQ 282 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~---~~-----~~~~~~ 282 (367)
-+.++|+++|+..+..+|+||+.+.. ... ..++.+.++|+|+|.++...-.. +. ...+..
T Consensus 979 dl~~~I~~Lk~~~~~~PV~VKlv~~~--------gi~----~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~ 1046 (1479)
T 1ea0_A 979 DLAQLIYDLKQINPDAKVTVKLVSRS--------GIG----TIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWE 1046 (1479)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECCT--------THH----HHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCC--------ChH----HHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHH
Confidence 46789999999987669999998731 112 24567788999999986542111 00 011223
Q ss_pred HHHHHHHHhc-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 283 RSLLSMRRAF-------EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 283 ~~~~~ir~~~-------~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
..+..+.+.+ ++||++.||+ |..++.++|.-| +|.|++||+++.
T Consensus 1047 ~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1047 MGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLG-AEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTT-CSEEECCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeeEcHHHHH
Confidence 3445555543 6899999999 899999999999 999999999986
No 234
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=97.46 E-value=0.0018 Score=57.97 Aligned_cols=133 Identities=11% Similarity=0.069 Sum_probs=86.4
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++. .+.|.|.|++..--|+|.+. +...+.+-|.+|+++++.. .+|+=...
T Consensus 70 ~~E~~~-i~~GAdEID~Vinig~~~~g-------------------~~~~v~~ei~~v~~a~~~~--~lKvIlEt----- 122 (226)
T 1vcv_A 70 IALVSR-LAEVADEIDVVAPIGLVKSR-------------------RWAEVRRDLISVVGAAGGR--VVKVITEE----- 122 (226)
T ss_dssp HHHHHH-HTTTCSEEEEECCHHHHHTT-------------------CHHHHHHHHHHHHHHTTTS--EEEEECCG-----
T ss_pred HHHHHH-HHCCCCEEEEecchhhhcCC-------------------CHHHHHHHHHHHHHHHcCC--CceEEEec-----
Confidence 344566 88999999998766544332 2356788899999999643 44421211
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccc-----c-CCchhhHHHHHHHHHh---cC--CcEEEeCCC-CHHHHHH
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-----L-TDKSETQRSLLSMRRA---FE--GTFIAAGGY-SRDEGNK 309 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-----~-~~~~~~~~~~~~ir~~---~~--~pvi~~Ggi-t~~~a~~ 309 (367)
...+.++....++...++|+|||-.+-+.... . .+.....+..+.+++. +. ++|-++||+ |.+++.+
T Consensus 123 -~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~ 201 (226)
T 1vcv_A 123 -PYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKA 201 (226)
T ss_dssp -GGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHH
Confidence 12245667778888889999999876543200 0 0111222333444444 54 789999999 8999999
Q ss_pred HHHc---CCCc----EEcccH
Q 017733 310 AVAA---NYTD----LVAFGR 323 (367)
Q Consensus 310 ~L~~---G~~D----~V~~gR 323 (367)
+++. | ++ -++..+
T Consensus 202 ~i~a~~~G-a~~~~fRiGtS~ 221 (226)
T 1vcv_A 202 IVDAIGWG-EDPARVRLGTST 221 (226)
T ss_dssp HHHHHCSC-SCTTTEEEEESC
T ss_pred HHHHHHCC-CCcCCceEecCc
Confidence 9999 8 77 666544
No 235
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=97.44 E-value=0.00017 Score=70.71 Aligned_cols=136 Identities=8% Similarity=0.069 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHhC-CCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCC-
Q 017733 159 NDFRLAARNAIEAG-FDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPY- 235 (367)
Q Consensus 159 ~~f~~aA~~a~~aG-fdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~- 235 (367)
+...+.|+.+.+.| |..+++..+.. +...+.-.+...+.|++||+++|++ .|.|..+..
T Consensus 182 ~~~~~~a~~~~~~G~~~~~KiKvG~~------------------~~~~~~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~ 243 (413)
T 1kcz_A 182 DKMIIKEADVLPHALINNVEEKLGLK------------------GEKLLEYVKWLRDRIIKLRVREDYAPIFHIDVYGTI 243 (413)
T ss_dssp HHHHHTTCSEEEECCCCCCCCCCCTT------------------SHHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHH
T ss_pred HHHHHHHHHHHHhcchhheeeccCCC------------------ccchhhHHHHHHHHHHHHHHhcCCCceEEEecCCCc
Confidence 44555555556678 99888764320 0002222344678999999999876 466655541
Q ss_pred -ccccccCCCChHHHHHHHHHHhhhc--Ccc-EEEEecCCccccCCchhhHHHHHHHHHh-----cCCcEEEeCCC-CHH
Q 017733 236 -AECAEAVDSNPEALGLYMAKALNKF--KLL-YLHVIEPRMIQLTDKSETQRSLLSMRRA-----FEGTFIAAGGY-SRD 305 (367)
Q Consensus 236 -~~~~~~~~~~~~~~~~~l~~~L~~~--Gvd-~i~v~~~~~~~~~~~~~~~~~~~~ir~~-----~~~pvi~~Ggi-t~~ 305 (367)
+.| ..+.+++..+++.|++. ++. ||+ +|... ...+.+....+.+++. +++||++...+ +++
T Consensus 244 ~~~~-----~~~~~~a~~~~~~L~~~~~~i~~~iE--qP~~~--~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~ 314 (413)
T 1kcz_A 244 GAAF-----DVDIKAMADYIQTLAEAAKPFHLRIE--GPMDV--EDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVE 314 (413)
T ss_dssp HHHT-----TTCHHHHHHHHHHHHHHHTTSCEEEE--CSBCC--SSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHH
T ss_pred cccc-----CCCHHHHHHHHHHHHhhcCCcceEEe--cCCCC--CCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHH
Confidence 000 03578899999999998 666 776 44210 0023345667778888 78899888777 899
Q ss_pred HHHHHHHcCCCcEEcc
Q 017733 306 EGNKAVAANYTDLVAF 321 (367)
Q Consensus 306 ~a~~~L~~G~~D~V~~ 321 (367)
++.++++.+.+|+|.+
T Consensus 315 ~~~~~i~~~a~d~v~i 330 (413)
T 1kcz_A 315 DVKFFTDNKAGHMVQI 330 (413)
T ss_dssp HHHHHHHTTCSSEEEE
T ss_pred HHHHHHHhCCCCEEEe
Confidence 9999999999999876
No 236
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.44 E-value=0.0043 Score=57.12 Aligned_cols=126 Identities=13% Similarity=0.116 Sum_probs=87.1
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
...+..+|.|+|-|.++. | . ..-+.++++..++. |- .+.+.++.
T Consensus 135 i~ea~~~GAD~VlLi~a~-------L-------~----------~~~l~~l~~~a~~l-Gl-~~lvevh~---------- 178 (272)
T 3tsm_A 135 VYEARSWGADCILIIMAS-------V-------D----------DDLAKELEDTAFAL-GM-DALIEVHD---------- 178 (272)
T ss_dssp HHHHHHTTCSEEEEETTT-------S-------C----------HHHHHHHHHHHHHT-TC-EEEEEECS----------
T ss_pred HHHHHHcCCCEEEEcccc-------c-------C----------HHHHHHHHHHHHHc-CC-eEEEEeCC----------
Confidence 445678999999987653 1 1 12356667776663 42 34444432
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.++ + +...+.|+|+|-+..++..... ........+.+.+ +.|+|+.||| |++++.++.+.| +|.|.+
T Consensus 179 --~eE---l-~~A~~~ga~iIGinnr~l~t~~---~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~~~G-a~gvLV 248 (272)
T 3tsm_A 179 --EAE---M-ERALKLSSRLLGVNNRNLRSFE---VNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLEKSG-IGTFLI 248 (272)
T ss_dssp --HHH---H-HHHTTSCCSEEEEECBCTTTCC---BCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHHTTT-CCEEEE
T ss_pred --HHH---H-HHHHhcCCCEEEECCCCCccCC---CChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHHHcC-CCEEEE
Confidence 333 2 3345789999998776554322 2344566677776 4789999999 899999999999 999999
Q ss_pred cHHHHhCCchHHHHH
Q 017733 322 GRLFLANPDLPKRFE 336 (367)
Q Consensus 322 gR~~ladP~l~~k~~ 336 (367)
|.+++..+|....++
T Consensus 249 G~almr~~d~~~~~~ 263 (272)
T 3tsm_A 249 GESLMRQHDVAAATR 263 (272)
T ss_dssp CHHHHTSSCHHHHHH
T ss_pred cHHHcCCcCHHHHHH
Confidence 999999998766554
No 237
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.44 E-value=0.0021 Score=59.58 Aligned_cols=109 Identities=18% Similarity=0.095 Sum_probs=75.3
Q ss_pred cccCCCCCCCc--hhhHhHHH---HHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEE
Q 017733 194 VNDRTDEYGGS--LENRCRFA---LEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHV 267 (367)
Q Consensus 194 ~N~R~D~yGgs--~enr~r~~---~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v 267 (367)
.|+|.+-|..- ..|+..++ .+.++++|+..|++ .|+|-.. +.+++.+ ..+.|+|||-+
T Consensus 159 ~nHR~~L~d~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~------------t~eea~e----A~~aGaD~I~l 222 (286)
T 1x1o_A 159 RNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVR------------SLEELEE----ALEAGADLILL 222 (286)
T ss_dssp BCCCSSSSSCEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEES------------SHHHHHH----HHHHTCSEEEE
T ss_pred cccccccccceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeC------------CHHHHHH----HHHcCCCEEEE
Confidence 57787777663 44666554 66889999999875 6777221 2444332 33579999987
Q ss_pred ecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 268 IEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
... ....++.+.+.+ ++|+.++||+|++.+.++.+.| +|+|+++.....-|
T Consensus 223 d~~----------~~~~~k~av~~v~~~ipi~AsGGIt~eni~~~a~tG-vD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 223 DNF----------PLEALREAVRRVGGRVPLEASGNMTLERAKAAAEAG-VDYVSVGALTHSAK 275 (286)
T ss_dssp ESC----------CHHHHHHHHHHHTTSSCEEEESSCCHHHHHHHHHHT-CSEEECTHHHHSCC
T ss_pred CCC----------CHHHHHHHHHHhCCCCeEEEEcCCCHHHHHHHHHcC-CCEEEEcHHHcCCC
Confidence 532 112233333333 5799999999999999999999 99999998666544
No 238
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.40 E-value=0.0023 Score=56.41 Aligned_cols=122 Identities=20% Similarity=0.182 Sum_probs=76.7
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
.++.+.++|+|.|-+|+..| .+.++.+|+.. ++-+.+.....+...
T Consensus 70 ~v~~~~~~Gad~vtvh~~~g-----------------------------~~~i~~~~~~~-----gv~vl~~t~~~~~~~ 115 (208)
T 2czd_A 70 IARKVFGAGADYVIVHTFVG-----------------------------RDSVMAVKELG-----EIIMVVEMSHPGALE 115 (208)
T ss_dssp HHHHHHHTTCSEEEEESTTC-----------------------------HHHHHHHHTTS-----EEEEECCCCSGGGGT
T ss_pred HHHHHHhcCCCEEEEeccCC-----------------------------HHHHHHHHHhC-----CcEEEEecCCcchhh
Confidence 34445579999999997543 23366676654 333333211111000
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHH--HHHHHHHcCCCcEEc
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRD--EGNKAVAANYTDLVA 320 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~--~a~~~L~~G~~D~V~ 320 (367)
.. .+....++.+..+.|++.+.+... ..+.++.+|+..+. +++..||++++ ++.++++.| +|.+.
T Consensus 116 ~~-~~~v~~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aG-ad~vv 183 (208)
T 2czd_A 116 FI-NPLTDRFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAG-ADYII 183 (208)
T ss_dssp TT-GGGHHHHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHT-CSEEE
T ss_pred HH-HHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcC-CCEEE
Confidence 00 223445666677889887754311 12345667887763 67799999766 788999999 89999
Q ss_pred ccHHHHhCCch
Q 017733 321 FGRLFLANPDL 331 (367)
Q Consensus 321 ~gR~~ladP~l 331 (367)
+||+.+..++.
T Consensus 184 vGr~I~~a~dp 194 (208)
T 2czd_A 184 VGRAIYNAPNP 194 (208)
T ss_dssp ECHHHHTSSSH
T ss_pred EChHHhcCCCH
Confidence 99999987664
No 239
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.40 E-value=0.0016 Score=57.61 Aligned_cols=111 Identities=21% Similarity=0.152 Sum_probs=77.7
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcccccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEA 241 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~ 241 (367)
+.+..|.++|.|+|- .++ +| .+++++.|+ .|.. .+++ +
T Consensus 74 d~~~~A~~~GAd~v~--~~~---------------~d-------------~~v~~~~~~-~g~~~i~G~--~-------- 112 (207)
T 2yw3_A 74 KEAEAALEAGAAFLV--SPG---------------LL-------------EEVAALAQA-RGVPYLPGV--L-------- 112 (207)
T ss_dssp HHHHHHHHHTCSEEE--ESS---------------CC-------------HHHHHHHHH-HTCCEEEEE--C--------
T ss_pred HHHHHHHHcCCCEEE--cCC---------------CC-------------HHHHHHHHH-hCCCEEecC--C--------
Confidence 567788899999983 322 11 577777777 5543 2332 1
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchh-hHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE-TQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~-~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
+.+++ ....+.|+||+.+.. . ... ....++.++..+ ++|+++.||++++++.++++.| +|.|
T Consensus 113 ----t~~e~----~~A~~~Gad~v~~fp------a-~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~n~~~~l~aG-a~~v 176 (207)
T 2yw3_A 113 ----TPTEV----ERALALGLSALKFFP------A-EPFQGVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALP-NLLA 176 (207)
T ss_dssp ----SHHHH----HHHHHTTCCEEEETT------T-TTTTHHHHHHHHHHHCTTCEEEEBSSCCGGGHHHHHTCS-SBSC
T ss_pred ----CHHHH----HHHHHCCCCEEEEec------C-ccccCHHHHHHHHhhCCCCcEEEeCCCCHHHHHHHHhCC-CcEE
Confidence 13332 223467999998731 1 111 245678899888 7999999999999999999999 9999
Q ss_pred cccHHHHhCCch
Q 017733 320 AFGRLFLANPDL 331 (367)
Q Consensus 320 ~~gR~~ladP~l 331 (367)
++++.++. +||
T Consensus 177 avgSai~~-~d~ 187 (207)
T 2yw3_A 177 VGGSWLLQ-GNL 187 (207)
T ss_dssp EEESGGGS-SCH
T ss_pred EEehhhhC-CCH
Confidence 99999887 663
No 240
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.40 E-value=0.00082 Score=74.44 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccC--------CchhhH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLT--------DKSETQ 282 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~--------~~~~~~ 282 (367)
-+.++|+.+|+..+..+|+||+.+.. ... ..++.+.++|+|+|.++...-.... ...+..
T Consensus 1014 dl~~~I~~Lk~~~~~~PV~VKlv~~~--------gi~----~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~ 1081 (1520)
T 1ofd_A 1014 DLAQLIYDLHQINPEAQVSVKLVAEI--------GIG----TIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWE 1081 (1520)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEECST--------THH----HHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHH
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCCC--------ChH----HHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHH
Confidence 46789999999986569999998631 112 2556778899999998654211100 011223
Q ss_pred HHHHHHHHhc-------CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 283 RSLLSMRRAF-------EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 283 ~~~~~ir~~~-------~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
..+..+.+.+ ++||++.||+ |..++.++|.-| +|.|++||+++.
T Consensus 1082 ~aL~ev~~al~~~glr~~IpVIAdGGIrtG~DVakALaLG-AdaV~iGTafL~ 1133 (1520)
T 1ofd_A 1082 LGVTEVHRVLMENQLRDRVLLRADGGLKTGWDVVMAALMG-AEEYGFGSIAMI 1133 (1520)
T ss_dssp HHHHHHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHHTT-CSEEECSHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHHcC-CCeeEEcHHHHH
Confidence 3444454443 6899999999 899999999999 999999999987
No 241
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=97.38 E-value=0.007 Score=54.55 Aligned_cols=47 Identities=13% Similarity=0.110 Sum_probs=41.7
Q ss_pred hHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 281 TQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 281 ~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
....++.+++.+++||++.||+ +++++.++++.| +|.|.+|++++..
T Consensus 179 ~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~~~G-ad~vivGsai~~~ 226 (248)
T 1geq_A 179 AYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEG-ANGVVVGSALVKI 226 (248)
T ss_dssp HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEECHHHHHH
T ss_pred HHHHHHHHHhhcCCCEEEEeecCCHHHHHHHHHcC-CCEEEEcHHHHhh
Confidence 4567888999889999999999 569999999998 9999999999865
No 242
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.38 E-value=0.0012 Score=59.00 Aligned_cols=125 Identities=10% Similarity=-0.051 Sum_probs=79.6
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCC-cceEEEeCCCccccccCCCCh
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGA-ERVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~-~~i~vrls~~~~~~~~~~~~~ 246 (367)
+.++|+|.|-+|+..| ...+.+.++++++.-.+ ..++|-+.+. .+
T Consensus 78 ~~~~Gad~vtVH~~~g-------------------------~~~l~~a~~~~~~~g~~~~~~~Vt~lts---------~~ 123 (221)
T 3exr_A 78 NAVRGADWMTCICSAT-------------------------IPTMKAARKAIEDINPDKGEIQVELYGD---------WT 123 (221)
T ss_dssp HHTTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHHCTTTCEEEEECCSS---------CC
T ss_pred HHHcCCCEEEEeccCC-------------------------HHHHHHHHHHHHhcCCCcceEEEEEcCC---------CC
Confidence 4679999999998653 12345566666654212 2578877652 23
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHH
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 324 (367)
.+... .+.+.+++++-++.+...+..+-.....-++.+|+.. +.++.+.||++++++.++++.| +|++.+||+
T Consensus 124 ~~~~~----~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~~~~~~~~~~aG-ad~~VvG~~ 198 (221)
T 3exr_A 124 YDQAQ----QWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLSVDTLKLFEGVD-VFTFIAGRG 198 (221)
T ss_dssp HHHHH----HHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCCGGGGGGGTTCC-CSEEEECHH
T ss_pred HHHHH----HHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCCHHHHHHHHHCC-CCEEEECch
Confidence 44332 3445678877665432221111111223456677765 4568899999999999999998 999999999
Q ss_pred HHhCCch
Q 017733 325 FLANPDL 331 (367)
Q Consensus 325 ~ladP~l 331 (367)
.+..+|-
T Consensus 199 I~~a~dp 205 (221)
T 3exr_A 199 ITEAKNP 205 (221)
T ss_dssp HHTSSSH
T ss_pred hhCCCCH
Confidence 9975553
No 243
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=97.36 E-value=0.00067 Score=59.93 Aligned_cols=63 Identities=11% Similarity=0.137 Sum_probs=48.8
Q ss_pred hhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 258 NKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 258 ~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
.+.|+|++-+. ++ .......++.+++.++ +||++.||++++++.++++.| +|.|.+|+.++..
T Consensus 118 ~~~G~d~v~v~-~t------~~~g~~~~~~l~~~~~~~ipvia~GGI~~~~i~~~~~~G-a~gv~vGsai~~~ 182 (212)
T 2v82_A 118 LEAGAQALKIF-PS------SAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAG-CAGAGLGSDLYRA 182 (212)
T ss_dssp HHTTCSEEEET-TH------HHHCHHHHHHHHTTSCTTCEEEEESSCCTTTHHHHHHHT-CSEEEECTTTCCT
T ss_pred HHCCCCEEEEe-cC------CCCCHHHHHHHHHhccCCCeEEEeCCCCHHHHHHHHHcC-CCEEEEChHHhCC
Confidence 45678877652 10 1123456777888776 899999999999999999998 9999999999876
No 244
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.35 E-value=0.00041 Score=62.73 Aligned_cols=123 Identities=11% Similarity=0.118 Sum_probs=78.1
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh--------CCcceEEEeCCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI--------GAERVGMRLSPY 235 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v--------g~~~i~vrls~~ 235 (367)
-+..+.++|+|+|-+|.... ..+.++++.+|+.. | ..+++=++|.
T Consensus 84 ~i~~~~~aGAd~itvH~ea~--------------------------~~~~~~i~~i~~~~~~~~~~~~g-~~~gv~l~p~ 136 (237)
T 3cu2_A 84 VAKAVVANGANLVTLQLEQY--------------------------HDFALTIEWLAKQKTTYANQVYP-VLIGACLCPE 136 (237)
T ss_dssp HHHHHHHTTCSEEEEETTCT--------------------------TSHHHHHHHHTTCEEEETTEEEE-CEEEEEECTT
T ss_pred HHHHHHHcCCCEEEEecCCc--------------------------ccHHHHHHHHHhcccccccccCC-ceEEEEEeCC
Confidence 34455679999999997541 11456777777651 2 2467777763
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEe--cCCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHH
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVI--EPRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGN 308 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~ 308 (367)
.+.+. ++.+. .++|++-+- .+.+......+...+.++.+|+.. +.+|.+-||++++.+.
T Consensus 137 ---------Tp~~~----l~~~l-~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~~~ 202 (237)
T 3cu2_A 137 ---------TPISE----LEPYL-DQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLELAK 202 (237)
T ss_dssp ---------SCGGG----GTTTT-TTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHHHH
T ss_pred ---------ChHHH----HHHHh-hcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHHHH
Confidence 12221 11121 258888441 232322222223344556677665 5789999999999999
Q ss_pred HHHH--cCCCcEEcccHHHHhC
Q 017733 309 KAVA--ANYTDLVAFGRLFLAN 328 (367)
Q Consensus 309 ~~L~--~G~~D~V~~gR~~lad 328 (367)
++++ .| +|.+.+|++++..
T Consensus 203 ~~~~~~aG-ad~~VvGSaIf~~ 223 (237)
T 3cu2_A 203 YFKQGTHQ-IDWLVSGSALFSG 223 (237)
T ss_dssp HHHHSSSC-CCCEEECGGGGSS
T ss_pred HHHHhCCC-CcEEEEeeHHhCC
Confidence 9999 99 9999999999974
No 245
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.35 E-value=0.0023 Score=58.45 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=83.0
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
...+.++|.|+|-|.... + . ..+.++++..++ .|-+. .|-++.
T Consensus 121 i~~a~~~GAD~VlL~~~~-------l----------------~--~~l~~l~~~a~~-lGl~~-lvev~~---------- 163 (254)
T 1vc4_A 121 LEEARAFGASAALLIVAL-------L----------------G--ELTGAYLEEARR-LGLEA-LVEVHT---------- 163 (254)
T ss_dssp HHHHHHTTCSEEEEEHHH-------H----------------G--GGHHHHHHHHHH-HTCEE-EEEECS----------
T ss_pred HHHHHHcCCCEEEECccc-------h----------------H--HHHHHHHHHHHH-CCCeE-EEEECC----------
Confidence 455788999999986542 1 0 235666666655 35322 333332
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCC-CHHHHHHHHHcCCCcE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGY-SRDEGNKAVAANYTDL 318 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggi-t~~~a~~~L~~G~~D~ 318 (367)
.++.. ...+.|.|++-+....+.... .+......+.+.+ ++|+++.||+ |++++.++++ | +|.
T Consensus 164 --~~E~~----~a~~~gad~IGvn~~~l~~~~---~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~~-G-a~g 232 (254)
T 1vc4_A 164 --ERELE----IALEAGAEVLGINNRDLATLH---INLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALEG-L-FDA 232 (254)
T ss_dssp --HHHHH----HHHHHTCSEEEEESBCTTTCC---BCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTTT-T-CSE
T ss_pred --HHHHH----HHHHcCCCEEEEccccCcCCC---CCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHHc-C-CCE
Confidence 23222 344568899988766543222 2234445555555 6799999999 6999999998 7 999
Q ss_pred EcccHHHHhCCchHHHHHh
Q 017733 319 VAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 319 V~~gR~~ladP~l~~k~~~ 337 (367)
|.+|++++..+|....+++
T Consensus 233 vlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 233 VLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp EEECHHHHTSSCHHHHHHH
T ss_pred EEEeHHHcCCCCHHHHHHH
Confidence 9999999999988776653
No 246
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=97.34 E-value=0.0078 Score=60.80 Aligned_cols=99 Identities=13% Similarity=0.100 Sum_probs=65.0
Q ss_pred HHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcC---ccEEEEecCCcc--ccCC--chhhHHHHHH
Q 017733 216 VEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFK---LLYLHVIEPRMI--QLTD--KSETQRSLLS 287 (367)
Q Consensus 216 i~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G---vd~i~v~~~~~~--~~~~--~~~~~~~~~~ 287 (367)
+..+|+..|++ .|++=.+ +.+++. ...+.| +|||-+..-..+ .+.. .+.....++.
T Consensus 98 ~~~ar~~lg~~~iiG~S~h------------t~eea~----~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~ 161 (540)
T 3nl6_A 98 IPMIRKLVGPDMVIGWSVG------------FPEEVD----ELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIR 161 (540)
T ss_dssp HHHHHHHHCTTSEEEEEEC------------SHHHHH----HHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEECC------------CHHHHH----HHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHH
Confidence 45677778876 5776332 234332 345678 999987422111 1111 1122445555
Q ss_pred HHHh------cCCcEEEeCCCCHHHHHHHHH--------cCCCcEEcccHHHHhCCch
Q 017733 288 MRRA------FEGTFIAAGGYSRDEGNKAVA--------ANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 288 ir~~------~~~pvi~~Ggit~~~a~~~L~--------~G~~D~V~~gR~~ladP~l 331 (367)
+++. .++|+++-|||+++.+.++++ .| +|.|+++++++..||.
T Consensus 162 i~~~~~~~~~~~iPvvAIGGI~~~ni~~v~~~~~~~g~~~G-adgvAVvsaI~~a~dp 218 (540)
T 3nl6_A 162 VLDALERNNAHWCRTVGIGGLHPDNIERVLYQCVSSNGKRS-LDGICVVSDIIASLDA 218 (540)
T ss_dssp HHHHHHHTTCTTCEEEEESSCCTTTHHHHHHHCBCTTSSCB-CSCEEESHHHHTCTTH
T ss_pred HHHHHHhhccCCCCEEEEcCCCHHHHHHHHHhhcccccccC-ceEEEEeHHHhcCCCH
Confidence 6554 478999999999999999998 56 9999999999987764
No 247
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.30 E-value=0.00056 Score=62.29 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhh----------HhHHHHHHHHHHHHHhCCcce
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLEN----------RCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~en----------r~r~~~eii~aiR~~vg~~~i 228 (367)
+.+.+.++.+.++|.|.|||-. |+++--.| |-.+++ +.+-++++++++|+. .|+
T Consensus 28 ~~t~~~~~~l~~~GaD~iElGi-----------PfSDP~aD--GpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~---~Pi 91 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILELGV-----------AYSDPIAD--GEIIADAAKIALDQGVDIHSVFELLARIKTK---KAL 91 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEEEC-----------CCSCCCSC--CCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS---SEE
T ss_pred HHHHHHHHHHHHcCCCEEEECC-----------CCCCCCCC--cHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC---CCE
Confidence 5677777778889999999976 55555555 444442 235567777777754 233
Q ss_pred EE--EeCCC-----cccc---------cc-CCCChHHHHHHHHHHhhhcCccEEEEecCCccc-----------------
Q 017733 229 GM--RLSPY-----AECA---------EA-VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----------------- 274 (367)
Q Consensus 229 ~v--rls~~-----~~~~---------~~-~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----------------- 274 (367)
.+ =+|+. +.|. +. ..+.+.|+...+.+.+.+.|++.|.+..++...
T Consensus 92 vlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 92 VFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEE
T ss_pred EEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEE
Confidence 22 22221 0000 00 123455666677777778888877654432110
Q ss_pred -----cCCch----hhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 275 -----LTDKS----ETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 275 -----~~~~~----~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
..... ...+.++.+|+..+.||++++|+ +++++.++. ++ +|.|.+|.+++.
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~-~~-ADGVIVGSAiVk 232 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMR-KV-ADGVIVGTSIVK 232 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHT-TT-SSEEEECHHHHH
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHH-hc-CCEEEECHHHHH
Confidence 00011 12346788999989999999999 899998876 45 999999999874
No 248
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=97.26 E-value=0.00046 Score=67.98 Aligned_cols=102 Identities=5% Similarity=0.081 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHh-------CCc-ceEEEeCCCcccccc-------C-CCChHHHHHHHHHHhhh-cCccEEEEecCCccc
Q 017733 212 ALEVVEAVVREI-------GAE-RVGMRLSPYAECAEA-------V-DSNPEALGLYMAKALNK-FKLLYLHVIEPRMIQ 274 (367)
Q Consensus 212 ~~eii~aiR~~v-------g~~-~i~vrls~~~~~~~~-------~-~~~~~~~~~~l~~~L~~-~Gvd~i~v~~~~~~~ 274 (367)
..+.|++||+++ |++ .|.+.....+.|.+. . ...+.+++.++++.|++ .++.||+ +|.
T Consensus 218 d~~~l~~vreai~~~g~~~G~dv~l~vDaaas~~~~~~~Y~~~~~n~~~~t~~~ai~~~~~L~~~~~i~~iE--ePl--- 292 (431)
T 2fym_A 218 NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIE--DGL--- 292 (431)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCEEEEE--SCS---
T ss_pred hHHHHHHHHHHHHHhccCCCCccEEEEeechhhccccCceeeccCCCCCCCHHHHHHHHHHHHHhCCceEEE--CCC---
Confidence 367888999998 776 577776332222110 0 12357888999999988 8988887 442
Q ss_pred cCCchhhHHHHHHHHHhc--CCcEEEeC-CC-CHHHHHHHHHcCCCcEEcc
Q 017733 275 LTDKSETQRSLLSMRRAF--EGTFIAAG-GY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 275 ~~~~~~~~~~~~~ir~~~--~~pvi~~G-gi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.+.+....+.+++.+ ++||++.. .+ +++++.++++.+.+|+|.+
T Consensus 293 ---~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~i 340 (431)
T 2fym_A 293 ---DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILI 340 (431)
T ss_dssp ---CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ---CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEE
Confidence 223456677789888 78888766 55 7999999999999999876
No 249
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.26 E-value=0.00081 Score=62.07 Aligned_cols=44 Identities=14% Similarity=0.122 Sum_probs=38.3
Q ss_pred HHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 282 QRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
...++.+|+..+.||++++|+ |++++.++ .| +|.|.+|.++...
T Consensus 191 ~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~--~~-ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 191 KDLVRRIKARTALPVAVGFGVSGKATAAQA--AV-ADGVVVGSALVRA 235 (271)
T ss_dssp HHHHHHHHTTCCSCEEEESCCCSHHHHHHH--TT-SSEEEECHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEcCCCCHHHHHHh--cC-CCEEEEChHHhcc
Confidence 357788999889999999999 69999996 66 9999999998854
No 250
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=97.24 E-value=0.0031 Score=57.30 Aligned_cols=129 Identities=15% Similarity=0.082 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHH-hCCCEE--EEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE-EeCC
Q 017733 159 NDFRLAARNAIE-AGFDGV--EIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM-RLSP 234 (367)
Q Consensus 159 ~~f~~aA~~a~~-aGfdgV--ei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v-rls~ 234 (367)
++.++.|+++.+ -|-+-| |++.-+. .++| -..+.|++.++.+.+....+ -.+
T Consensus 77 eeAv~~a~lare~~gt~~iKlEvi~d~~-----~l~p------------------D~~~tv~aa~~L~k~Gf~Vlpy~~- 132 (268)
T 2htm_A 77 EEAVRLARLGRLLTGERWVKLEVIPDPT-----YLLP------------------DPLETLKAAERLIEEDFLVLPYMG- 132 (268)
T ss_dssp HHHHHHHHHHHHHHCCSEEBCCCCSCTT-----TTCC------------------CHHHHHHHHHHHHHTTCEECCEEC-
T ss_pred HHHHHHHHhhhHhcCcceeeeeeccCcc-----ccCc------------------CHHHHHHHHHHHHHCCCEEeeccC-
Confidence 456777777776 466665 4443321 1111 14788888888875542222 111
Q ss_pred CccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH-hcC-CcEEEeCCC-CHHHHHHHH
Q 017733 235 YAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR-AFE-GTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~-~~~-~pvi~~Ggi-t~~~a~~~L 311 (367)
.+ . .+++.|++.|.+.+.-...-... .....+.+.++.+++ ..+ +|||+.||| |++++.+++
T Consensus 133 ---------~D-~----~~ak~l~~~G~~aVmPlg~pIGs-G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Am 197 (268)
T 2htm_A 133 ---------PD-L----VLAKRLAALGTATVMPLAAPIGS-GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVM 197 (268)
T ss_dssp ---------SC-H----HHHHHHHHHTCSCBEEBSSSTTT-CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHH
T ss_pred ---------CC-H----HHHHHHHhcCCCEEEecCccCcC-CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHH
Confidence 11 2 47888999999988431111111 112224567888988 678 999999999 899999999
Q ss_pred HcCCCcEEcccHHHHh
Q 017733 312 AANYTDLVAFGRLFLA 327 (367)
Q Consensus 312 ~~G~~D~V~~gR~~la 327 (367)
+-| +|.|.++.+...
T Consensus 198 eLG-AdgVlVgSAI~~ 212 (268)
T 2htm_A 198 ELG-LDAVLVNTAIAE 212 (268)
T ss_dssp HTT-CCEEEESHHHHT
T ss_pred HcC-CCEEEEChHHhC
Confidence 999 999999999886
No 251
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.22 E-value=0.0011 Score=59.58 Aligned_cols=123 Identities=20% Similarity=0.238 Sum_probs=78.4
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
+.+.++|+|+|-+|+-.. + .-+.++++.+|+. | -.+++=+++. .
T Consensus 74 ~~~~~aGAd~itvh~Ea~--------------~-----------~~~~~~i~~i~~~-G-~k~gv~lnp~---------t 117 (231)
T 3ctl_A 74 AQLARAGADFITLHPETI--------------N-----------GQAFRLIDEIRRH-D-MKVGLILNPE---------T 117 (231)
T ss_dssp HHHHHHTCSEEEECGGGC--------------T-----------TTHHHHHHHHHHT-T-CEEEEEECTT---------C
T ss_pred HHHHHcCCCEEEECcccC--------------C-----------ccHHHHHHHHHHc-C-CeEEEEEECC---------C
Confidence 455678999999986320 0 1146788888874 3 2567777773 2
Q ss_pred hHHHHHHHHHHhhhcCccEEEEe--cCCccccCCchhhHHHHHHHHHhc-----CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 246 PEALGLYMAKALNKFKLLYLHVI--EPRMIQLTDKSETQRSLLSMRRAF-----EGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~--~~~~~~~~~~~~~~~~~~~ir~~~-----~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
+.+ .++.+.+ ++|++-+- .+.+......+....-++.+|+.. +.++.+-||++++.+.++++.| +|.
T Consensus 118 p~~----~~~~~l~-~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~~~~~~aG-Ad~ 191 (231)
T 3ctl_A 118 PVE----AMKYYIH-KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAG-ADV 191 (231)
T ss_dssp CGG----GGTTTGG-GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTHHHHHHHT-CCE
T ss_pred cHH----HHHHHHh-cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHHHHHHHcC-CCE
Confidence 222 1122222 58887642 232322111223344455566554 5789999999999999999999 999
Q ss_pred Eccc-HHHHhCCc
Q 017733 319 VAFG-RLFLANPD 330 (367)
Q Consensus 319 V~~g-R~~ladP~ 330 (367)
+.+| ++++..+|
T Consensus 192 ~V~G~saif~~~d 204 (231)
T 3ctl_A 192 FIVGTSGLFNHAE 204 (231)
T ss_dssp EEECTTTTGGGCS
T ss_pred EEEccHHHhCCCC
Confidence 9999 99997655
No 252
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.19 E-value=0.0026 Score=58.67 Aligned_cols=131 Identities=9% Similarity=0.107 Sum_probs=80.4
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|++..--|.|.+.-.. | .+.+.+-|.+|+++++..++.|=|-. .+
T Consensus 109 v~E~~~Av~~GAdEIDmVinig~lksg~~~-----------~-----~~~v~~eI~~v~~a~~~~~lKVIlEt--~~--- 167 (281)
T 2a4a_A 109 LNDTEKALDDGADEIDLVINYKKIIENTDE-----------G-----LKEATKLTQSVKKLLTNKILKVIIEV--GE--- 167 (281)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHHSHHH-----------H-----HHHHHHHHHHHHTTCTTSEEEEECCH--HH---
T ss_pred HHHHHHHHHcCCCEEEEecchHhhhCCChh-----------H-----HHHHHHHHHHHHHHhcCCceEEEEec--cc---
Confidence 456778889999999998876655443220 0 23678888899998874343332211 11
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHH-HHHH--------hcCCcEEEeCCC-CHHHHHHHH
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLL-SMRR--------AFEGTFIAAGGY-SRDEGNKAV 311 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~-~ir~--------~~~~pvi~~Ggi-t~~~a~~~L 311 (367)
-...+.....++...++|+|||-.+-+.... .--......++ .+++ ..+++|-++||+ |.+++.+++
T Consensus 168 --L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~-gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i 244 (281)
T 2a4a_A 168 --LKTEDLIIKTTLAVLNGNADFIKTSTGKVQI-NATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYI 244 (281)
T ss_dssp --HCSHHHHHHHHHHHHTTTCSEEECCCSCSSC-CCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHhCCCEEEeCCCCCCC-CCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHH
Confidence 0112324567777789999999876442211 11111222232 2332 235789999999 899999999
Q ss_pred HcCCCc
Q 017733 312 AANYTD 317 (367)
Q Consensus 312 ~~G~~D 317 (367)
+.| ++
T Consensus 245 ~ag-a~ 249 (281)
T 2a4a_A 245 LLA-RR 249 (281)
T ss_dssp HHH-HH
T ss_pred HHh-hh
Confidence 987 54
No 253
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.18 E-value=0.0014 Score=58.40 Aligned_cols=113 Identities=13% Similarity=0.105 Sum_probs=77.3
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~ 240 (367)
.+.++.|.++|.|+|- .++ + | .+++++.|+ .|.+ .+++ .
T Consensus 78 ~d~~~~A~~aGAd~v~--~p~-----------~----d-------------~~v~~~~~~-~g~~~i~G~--~------- 117 (214)
T 1wbh_A 78 PQQLAEVTEAGAQFAI--SPG-----------L----T-------------EPLLKAATE-GTIPLIPGI--S------- 117 (214)
T ss_dssp HHHHHHHHHHTCSCEE--ESS-----------C----C-------------HHHHHHHHH-SSSCEEEEE--S-------
T ss_pred HHHHHHHHHcCCCEEE--cCC-----------C----C-------------HHHHHHHHH-hCCCEEEec--C-------
Confidence 4678889999999993 322 1 1 466666666 5543 2342 1
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
+.++. ....+.|+||+-+.. .........++.++..+ ++|+++.||++++.+.++++.|.++.|
T Consensus 118 -----t~~e~----~~A~~~Gad~v~~Fp------a~~~gG~~~lk~i~~~~~~ipvvaiGGI~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 118 -----TVSEL----MLGMDYGLKEFKFFP------AEANGGVKALQAIAGPFSQVRFCPTGGISPANYRDYLALKSVLCI 182 (214)
T ss_dssp -----SHHHH----HHHHHTTCCEEEETT------TTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHTSTTBSCE
T ss_pred -----CHHHH----HHHHHCCCCEEEEec------CccccCHHHHHHHhhhCCCCeEEEECCCCHHHHHHHHhcCCCeEE
Confidence 12332 234568999998832 11111256788899988 789999999999999999999669999
Q ss_pred cccHHHHhCCc
Q 017733 320 AFGRLFLANPD 330 (367)
Q Consensus 320 ~~gR~~ladP~ 330 (367)
+ ++.++..++
T Consensus 183 ~-gS~i~~~~~ 192 (214)
T 1wbh_A 183 G-GSWLVPADA 192 (214)
T ss_dssp E-EGGGSCHHH
T ss_pred E-eccccChhh
Confidence 9 888765543
No 254
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.16 E-value=0.005 Score=57.41 Aligned_cols=109 Identities=12% Similarity=-0.000 Sum_probs=74.7
Q ss_pred cccCCCCCCCch--hhHhHH---HHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEe
Q 017733 194 VNDRTDEYGGSL--ENRCRF---ALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVI 268 (367)
Q Consensus 194 ~N~R~D~yGgs~--enr~r~---~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~ 268 (367)
.|+|...+.+-+ .|-..+ +.+-++++|+..++..|.|-.. +.++..+. .+.|+|+|-++
T Consensus 172 ~~hr~~l~d~vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev~------------tlee~~eA----~~aGaD~I~ld 235 (296)
T 1qap_A 172 ANHRLGLTDAFLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVE------------NLDELDDA----LKAGADIIMLD 235 (296)
T ss_dssp BCCCSSSSSCEEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEES------------SHHHHHHH----HHTTCSEEEES
T ss_pred hhhccccccEEEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEeC------------CHHHHHHH----HHcCCCEEEEC
Confidence 567777777643 355555 5788899999987534555221 23433322 35799999886
Q ss_pred cCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 269 EPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.. ....++.+.+.+ ++++.++||+|++.+.++++.| +|++++|.....-|
T Consensus 236 ~~----------~~e~l~~~v~~~~~~~~I~ASGGIt~~~i~~~a~~G-vD~isvGsli~~a~ 287 (296)
T 1qap_A 236 NF----------NTDQMREAVKRVNGQARLEVSGNVTAETLREFAETG-VDFISVGALTKHVR 287 (296)
T ss_dssp SC----------CHHHHHHHHHTTCTTCCEEECCCSCHHHHHHHHHTT-CSEEECSHHHHEEE
T ss_pred CC----------CHHHHHHHHHHhCCCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 32 223455555555 4789999999999999999999 89999999554333
No 255
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.14 E-value=0.0025 Score=58.24 Aligned_cols=135 Identities=19% Similarity=0.139 Sum_probs=84.5
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+..++.|.+.|.|.|++..--|.|.+. +...+.+-|.+|+++++.....+|+=....+
T Consensus 88 v~E~~~Av~~GAdEIDmVinig~l~~g-------------------~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~--- 145 (260)
T 1p1x_A 88 LAETRAAIAYGADEVDVVFPYRALMAG-------------------NEQVGFDLVKACKEACAAANVLLKVIIETGE--- 145 (260)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHTT-------------------CCHHHHHHHHHHHHHHHHTTCEEEEECCHHH---
T ss_pred HHHHHHHHHcCCCEEEEeccHHhhhCC-------------------CHHHHHHHHHHHHHHhcccCCeEEEEEeccc---
Confidence 456788889999999998766554332 1246788888999988632122232221111
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh-------cCCcEEEeCCC-CHHHHHHHHHc
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA-------FEGTFIAAGGY-SRDEGNKAVAA 313 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~-------~~~pvi~~Ggi-t~~~a~~~L~~ 313 (367)
-...+.....++...++|+|||-.+-+... .....+..+.+++. .+++|-++||+ |.+++.++++.
T Consensus 146 --L~d~e~i~~a~~ia~eaGADfVKTSTGf~~----~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~a 219 (260)
T 1p1x_A 146 --LKDEALIRKASEISIKAGADFIKTSTGKVA----VNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI 219 (260)
T ss_dssp --HCSHHHHHHHHHHHHHTTCSEEECCCSCSS----CCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHH
T ss_pred --CCcHHHHHHHHHHHHHhCCCEEEeCCCCCC----CCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHh
Confidence 011222456777778999999987644221 11223333333333 25789999999 89999999998
Q ss_pred CCCc------------EEcccHHH
Q 017733 314 NYTD------------LVAFGRLF 325 (367)
Q Consensus 314 G~~D------------~V~~gR~~ 325 (367)
| ++ -++..+++
T Consensus 220 g-a~~lG~~w~~~~~~RiGtS~~~ 242 (260)
T 1p1x_A 220 A-DELFGADWADARHYRFGASSLL 242 (260)
T ss_dssp H-HHHHCTTSCSTTTBCEEESTHH
T ss_pred h-hhhccccccccCceEeecchhH
Confidence 7 44 67766554
No 256
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=97.12 E-value=0.0079 Score=69.42 Aligned_cols=91 Identities=9% Similarity=0.044 Sum_probs=66.3
Q ss_pred HHHHHHHHHhhhcCccEEE---EecCCccccCC-c---hhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH--------
Q 017733 248 ALGLYMAKALNKFKLLYLH---VIEPRMIQLTD-K---SETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV-------- 311 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~---v~~~~~~~~~~-~---~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L-------- 311 (367)
.++...+..+.++|+|.|- +.........+ . ......+..|++.+++|||+.||| |.+++.++|
T Consensus 703 ~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~~~ 782 (2060)
T 2uva_G 703 VDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWSTKF 782 (2060)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchhhc
Confidence 4566777778899999886 43322211111 1 223456778999999999999999 999999999
Q ss_pred ---HcCCCcEEcccHHHHhCCc------hHHHHHhCC
Q 017733 312 ---AANYTDLVAFGRLFLANPD------LPKRFELNA 339 (367)
Q Consensus 312 ---~~G~~D~V~~gR~~ladP~------l~~k~~~g~ 339 (367)
..| +|.|.||+.+++=.+ +-+.+.+..
T Consensus 783 g~palG-AdgV~~GT~f~~t~Ea~~s~~~K~~lv~a~ 818 (2060)
T 2uva_G 783 GYPPMP-FDGCMFGSRMMTAKEAHTSKQAKQAIVDAP 818 (2060)
T ss_dssp TSCCCC-CSCEEESGGGGGBTTSCCCHHHHHHHHTSC
T ss_pred CCCCCC-CCEEEEchhhhcCcCCCCCHHHHHHHHhCC
Confidence 999 999999999998653 555555543
No 257
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.10 E-value=0.0054 Score=54.32 Aligned_cols=122 Identities=12% Similarity=0.034 Sum_probs=75.4
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeC-CCccccccCCCC
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLS-PYAECAEAVDSN 245 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls-~~~~~~~~~~~~ 245 (367)
.+.++|+|.|-+|+..| ...+.+.++.+|+. |. .+++.+. .-
T Consensus 75 ~~~~~Gad~itvh~~~g-------------------------~~~l~~~~~~~~~~-g~-~~~~~ll~~~---------- 117 (216)
T 1q6o_A 75 MCFEANADWVTVICCAD-------------------------INTAKGALDVAKEF-NG-DVQIELTGYW---------- 117 (216)
T ss_dssp HHHHTTCSEEEEETTSC-------------------------HHHHHHHHHHHHHT-TC-EEEEEECSCC----------
T ss_pred HHHhCCCCEEEEeccCC-------------------------HHHHHHHHHHHHHc-CC-CceeeeeeCC----------
Confidence 45679999999997542 11234556667663 32 4556565 31
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
+.. -.+.+++.|++++-++...... +.... ....++.+|+.. +.|+++.||++++.+.++++.| +|+|.+|
T Consensus 118 t~~----~~~~l~~~~~~~~vl~~a~~~~~~G~~g-~~~~i~~lr~~~~~~~~i~v~GGI~~~~~~~~~~aG-ad~ivvG 191 (216)
T 1q6o_A 118 TWE----QAQQWRDAGIGQVVYHRSRDAQAAGVAW-GEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIP-IHVFIAG 191 (216)
T ss_dssp CHH----HHHHHHHTTCCEEEEECCHHHHHTTCCC-CHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSC-CSEEEES
T ss_pred Chh----hHHHHHhcCcHHHHHHHHHHHHhcCCCC-CHHHHHHHHHhcCCCCcEEEECCcChhhHHHHHHcC-CCEEEEe
Confidence 111 1123444566655553322211 11111 134456677665 4679999999999999999998 9999999
Q ss_pred HHHHhCCch
Q 017733 323 RLFLANPDL 331 (367)
Q Consensus 323 R~~ladP~l 331 (367)
|+.+..+|.
T Consensus 192 ~~I~~a~dp 200 (216)
T 1q6o_A 192 RSIRDAASP 200 (216)
T ss_dssp HHHHTSSCH
T ss_pred ehhcCCCCH
Confidence 999986653
No 258
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.09 E-value=0.0012 Score=67.01 Aligned_cols=88 Identities=8% Similarity=0.016 Sum_probs=68.6
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccc--cCCchhhHHHHHHHHHhcCCcEEEeCCC-CH-----------HHHHHHHHcC
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQ--LTDKSETQRSLLSMRRAFEGTFIAAGGY-SR-----------DEGNKAVAAN 314 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~--~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~-----------~~a~~~L~~G 314 (367)
+-.++++.+.+.|+|.+|+.+-+... +.........++.+++.+++||+++||+ +. ++++++++.|
T Consensus 281 dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aG 360 (555)
T 1jvn_A 281 KPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSG 360 (555)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcC
Confidence 45678999999999999886533211 1112234567788888889999999999 65 6699999999
Q ss_pred CCcEEcccHHHHh-------------CCchHHHHHh
Q 017733 315 YTDLVAFGRLFLA-------------NPDLPKRFEL 337 (367)
Q Consensus 315 ~~D~V~~gR~~la-------------dP~l~~k~~~ 337 (367)
+|.|.++..++. +|++++++.+
T Consensus 361 -ad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 361 -ADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp -CSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred -CCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 999999999988 5899999876
No 259
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=97.05 E-value=0.0009 Score=63.30 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
+.+++.|+.+.+.||..++|..+. + ...+.+++||+++ ++ .|.+..|.
T Consensus 134 e~~~~~a~~~~~~G~~~~KiKvg~--------------~-------------~d~~~v~avr~~~-~~~~l~vDaN~--- 182 (324)
T 1jpd_X 134 DQMANSASTLWQAGAKLLKVKLDN--------------H-------------LISERMVAIRTAV-PDATLIVDANE--- 182 (324)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS--------------S-------------CHHHHHHHHHHHC-TTSEEEEECTT---
T ss_pred HHHHHHHHHHHHcCCCEEEEEeCC--------------c-------------hHHHHHHHHHHhC-CCCEEEEECcC---
Confidence 445677777888999999998642 0 1366889999998 44 45665553
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYT 316 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~ 316 (367)
..+.+++.++++.|++.++.||+ +|.... +...++.++ .++||.+...+ +++++.++++. +
T Consensus 183 ------~~~~~~a~~~~~~l~~~~i~~iE--qP~~~~------d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~~--~ 244 (324)
T 1jpd_X 183 ------SWRAEGLAARCQLLADLGVAMLE--QPLPAQ------DDAALENFI--HPLPICADESCHTRSNLKALKGR--Y 244 (324)
T ss_dssp ------CCCSTTHHHHHHHHHHTTCCEEE--CCSCTT------SCGGGGSSC--CSSCEEESTTCSSGGGHHHHBTT--B
T ss_pred ------CCCHHHHHHHHHHHHhCCCCEEE--CCCCCC------CHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHhh--C
Confidence 22345678899999999999988 542210 111111121 45677776666 67777776643 5
Q ss_pred cEEcc
Q 017733 317 DLVAF 321 (367)
Q Consensus 317 D~V~~ 321 (367)
|+|.+
T Consensus 245 ~~i~i 249 (324)
T 1jpd_X 245 EMVNI 249 (324)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 65544
No 260
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.93 E-value=0.044 Score=50.50 Aligned_cols=138 Identities=14% Similarity=-0.006 Sum_probs=85.8
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+.-|+.|.+.|.|.|++-.--|.|+++ ...+...+.+-|++||+++++..+.|=|-.
T Consensus 103 ~~Ea~~Av~~GAdEIDmVinig~lk~~----------------~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt------- 159 (297)
T 4eiv_A 103 SLEAVGALKDGADEIECLIDWRRMNEN----------------VADGESRIRLLVSEVKKVVGPKTLKVVLSG------- 159 (297)
T ss_dssp HHHHHHHHHTTCSEEEEECCTHHHHHC----------------HHHHHHHHHHHHHHHHHHHTTSEEEEECCS-------
T ss_pred HHHHHHHHHcCCCEEEeeeeHHHHhcc----------------cCCcHHHHHHHHHHHHHHhcCCceEEEEec-------
Confidence 455778889999999988766655541 124567888999999999975444332321
Q ss_pred CCCChHHH-HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHH-HHHHHh--------------------cCCcEEEe
Q 017733 242 VDSNPEAL-GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSL-LSMRRA--------------------FEGTFIAA 299 (367)
Q Consensus 242 ~~~~~~~~-~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~-~~ir~~--------------------~~~pvi~~ 299 (367)
...+.++ ....++...++|+|||-.+-+.... .--......+ +.+++. -++-|=++
T Consensus 160 -~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~-gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs 237 (297)
T 4eiv_A 160 -GELQGGDIISRAAVAALEGGADFLQTSSGLGAT-HATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIE 237 (297)
T ss_dssp -SCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSC-CCCHHHHHHHHHHHHHHHCC------------------CCEEEEE
T ss_pred -ccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCC-CCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEec
Confidence 1222233 4567777788999999877553211 1111122222 223221 12447788
Q ss_pred -CCC-CHHHHHHHHH-----------cCCCcEEcccHHH
Q 017733 300 -GGY-SRDEGNKAVA-----------ANYTDLVAFGRLF 325 (367)
Q Consensus 300 -Ggi-t~~~a~~~L~-----------~G~~D~V~~gR~~ 325 (367)
||| |.++|.++|+ .+ ..-++..+.+
T Consensus 238 ~GGIrt~e~A~~~i~~~~elG~~wl~~~-~fRiGaSs~l 275 (297)
T 4eiv_A 238 VGDVHMAETADFLMQMIFENGPRSIVRD-KFRVGGGFNL 275 (297)
T ss_dssp CTTCCHHHHHHHHHHHHHHHCGGGCSTT-TEEEEECHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCccccCCC-ceEecccHHH
Confidence 999 8999999998 55 5677777733
No 261
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=96.92 E-value=0.0093 Score=53.43 Aligned_cols=105 Identities=10% Similarity=0.163 Sum_probs=69.8
Q ss_pred HHHHHH---HHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcC-ccEEEEe--cCCccccCCchhhHHHH
Q 017733 212 ALEVVE---AVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFK-LLYLHVI--EPRMIQLTDKSETQRSL 285 (367)
Q Consensus 212 ~~eii~---aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G-vd~i~v~--~~~~~~~~~~~~~~~~~ 285 (367)
+.++++ .+|+. | ..++|-+++. .+.+ .++.+.+.| +|++-+- .+.+......+....-+
T Consensus 100 ~~~~i~~~~~i~~~-G-~k~gvalnp~---------tp~~----~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki 164 (227)
T 1tqx_A 100 TERCIQLAKEIRDN-N-LWCGISIKPK---------TDVQ----KLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKV 164 (227)
T ss_dssp HHHHHHHHHHHHTT-T-CEEEEEECTT---------SCGG----GGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHH
T ss_pred HHHHHHHHHHHHHc-C-CeEEEEeCCC---------CcHH----HHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHH
Confidence 456777 77663 2 2567777773 2222 233444554 8998442 23332222223345567
Q ss_pred HHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchH
Q 017733 286 LSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLP 332 (367)
Q Consensus 286 ~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~ 332 (367)
+.+|+.. +.++.+-||++++.+.++++.| +|.+.+||+++..+|..
T Consensus 165 ~~lr~~~~~~~I~VdGGI~~~ti~~~~~aG-Ad~~V~GsaIf~~~d~~ 211 (227)
T 1tqx_A 165 SFLRKKYKNLNIQVDGGLNIETTEISASHG-ANIIVAGTSIFNAEDPK 211 (227)
T ss_dssp HHHHHHCTTCEEEEESSCCHHHHHHHHHHT-CCEEEESHHHHTCSSHH
T ss_pred HHHHHhccCCeEEEECCCCHHHHHHHHHcC-CCEEEEeHHHhCCCCHH
Confidence 7788777 5678899999999999999999 99999999999876643
No 262
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.91 E-value=0.0013 Score=58.90 Aligned_cols=109 Identities=15% Similarity=0.081 Sum_probs=74.3
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~ 240 (367)
.+.+..|.++|.|+|- .++ + | .+++++.|+ .|.+ .+++ .
T Consensus 88 ~d~~~~A~~aGAd~v~--~p~-----------~----d-------------~~v~~~~~~-~g~~~i~G~--~------- 127 (225)
T 1mxs_A 88 RSMFAAVEAAGAQFVV--TPG-----------I----T-------------EDILEAGVD-SEIPLLPGI--S------- 127 (225)
T ss_dssp HHHHHHHHHHTCSSEE--CSS-----------C----C-------------HHHHHHHHH-CSSCEECEE--C-------
T ss_pred HHHHHHHHHCCCCEEE--eCC-----------C----C-------------HHHHHHHHH-hCCCEEEee--C-------
Confidence 4788899999999993 322 1 1 466666665 5543 2342 1
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchh-hHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE-TQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~-~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
+.++. ....+.|+||+-+.. .... ....++.++..+ ++|+++.||++++.+.++++.+.+|.
T Consensus 128 -----t~~e~----~~A~~~Gad~vk~FP-------a~~~~G~~~lk~i~~~~~~ipvvaiGGI~~~N~~~~l~~~Ga~~ 191 (225)
T 1mxs_A 128 -----TPSEI----MMGYALGYRRFKLFP-------AEISGGVAAIKAFGGPFGDIRFCPTGGVNPANVRNYMALPNVMC 191 (225)
T ss_dssp -----SHHHH----HHHHTTTCCEEEETT-------HHHHTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHHSTTBCC
T ss_pred -----CHHHH----HHHHHCCCCEEEEcc-------CccccCHHHHHHHHhhCCCCeEEEECCCCHHHHHHHHhccCCEE
Confidence 12332 234478999998721 1111 246788899888 68999999999999999999433999
Q ss_pred EcccHHHHh
Q 017733 319 VAFGRLFLA 327 (367)
Q Consensus 319 V~~gR~~la 327 (367)
|+ ++.++.
T Consensus 192 v~-gSai~~ 199 (225)
T 1mxs_A 192 VG-TTWMLD 199 (225)
T ss_dssp EE-ECTTSC
T ss_pred EE-EchhcC
Confidence 99 887764
No 263
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=96.89 E-value=0.0034 Score=57.95 Aligned_cols=93 Identities=8% Similarity=-0.031 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhH-HHHHHHHH
Q 017733 213 LEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQ-RSLLSMRR 290 (367)
Q Consensus 213 ~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~-~~~~~ir~ 290 (367)
.+-++++|+..++. .+.+-.. +.++..+. .+.|+|+|-+.... +... ...+.++.
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A----~~aGaD~I~ld~~~-------~~~l~~~v~~l~~ 225 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE------------SFEEAKNA----MNAGADIVMCDNLS-------VLETKEIAAYRDA 225 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES------------SHHHHHHH----HHHTCSEEEEETCC-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEcC------------CHHHHHHH----HHcCCCEEEECCCC-------HHHHHHHHHHhhc
Confidence 67788889888753 5565221 23443332 24799999876421 1111 12223433
Q ss_pred hc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 291 AF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 291 ~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.. ++|+.++||+|++.+.++++.| +|.+++|.....-|
T Consensus 226 ~~~~~~i~AsGGI~~~ni~~~~~aG-aD~i~vGs~i~~a~ 264 (273)
T 2b7n_A 226 HYPFVLLEASGNISLESINAYAKSG-VDAISVGALIHQAT 264 (273)
T ss_dssp HCTTCEEEEESSCCTTTHHHHHTTT-CSEEECTHHHHTCC
T ss_pred cCCCcEEEEECCCCHHHHHHHHHcC-CcEEEEcHHhcCCC
Confidence 32 2789999999999999999999 89999999877555
No 264
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=96.89 E-value=0.04 Score=48.91 Aligned_cols=131 Identities=10% Similarity=0.102 Sum_probs=78.2
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
..++++|.|+|-| +| +.+|.. ..-+.+.++..++. |- .+.+-++..
T Consensus 76 ~~~~~~Gad~Vll--~~-----------ser~l~---------~~e~~~~~~~a~~~-Gl-~~iv~v~~~---------- 121 (219)
T 2h6r_A 76 EAIKDCGCKGTLI--NH-----------SEKRML---------LADIEAVINKCKNL-GL-ETIVCTNNI---------- 121 (219)
T ss_dssp HHHHHHTCCEEEE--SB-----------TTBCCB---------HHHHHHHHHHHHHH-TC-EEEEEESSS----------
T ss_pred HHHHHcCCCEEEE--CC-----------ccccCC---------HHHHHHHHHHHHHC-CC-eEEEEeCCc----------
Confidence 6778899999998 33 222322 01145566666554 32 334444431
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCc-c-----ccCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCc
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRM-I-----QLTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTD 317 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~-~-----~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D 317 (367)
.+ .+.+.+.+.+++-+...+. . ............+.+|+.. +.||+..||+ ++++++.+.+.| +|
T Consensus 122 -~e-----~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~ggGI~~~~~~~~~~~~g-aD 194 (219)
T 2h6r_A 122 -NT-----SKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLCGAGISKGEDVKAALDLG-AE 194 (219)
T ss_dssp -HH-----HHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEECSSCCSHHHHHHHHTTT-CC
T ss_pred -hH-----HHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEEEeCcCcHHHHHHHhhCC-CC
Confidence 11 1234555777887754432 1 1111111224455566655 6799999999 588888888777 99
Q ss_pred EEcccHHHHhCCchHHHHHh
Q 017733 318 LVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 318 ~V~~gR~~ladP~l~~k~~~ 337 (367)
.|.+|++++.-+++...+++
T Consensus 195 gvlVGsAi~~~~d~~~~~~~ 214 (219)
T 2h6r_A 195 GVLLASGVVKAKNVEEAIRE 214 (219)
T ss_dssp CEEESHHHHTCSSHHHHHHH
T ss_pred EEEEcHHHhCcccHHHHHHH
Confidence 99999999998887666553
No 265
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=96.86 E-value=0.0057 Score=59.79 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCcc---EEEEecCCccccCCchhhHHHH
Q 017733 210 RFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLL---YLHVIEPRMIQLTDKSETQRSL 285 (367)
Q Consensus 210 r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd---~i~v~~~~~~~~~~~~~~~~~~ 285 (367)
+...+.|++||+++|++ .|.+..+.. +. .....+.+++.++++.|++.++. ||+ +|... ...+.+....
T Consensus 216 ~~d~~~v~aiR~~~G~~~~L~vDan~~--~~-~~~~~~~~~A~~~~~~L~~~~~~~~l~iE--qP~~~--~~~~~d~~~~ 288 (413)
T 1kko_A 216 RWLSDRILSLRSSPRYHPTLHIDVYGT--IG-LIFDMDPVRCAEYIASLEKEAQGLPLYIE--GPVDA--GNKPDQIRML 288 (413)
T ss_dssp HHHHHHHHHHCSSTTCCCEEEEECTTH--HH-HHTTTCHHHHHHHHHHTGGGGTTSCEEEE--CCCCC--SSHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCeEEEECCCc--cc-cccCCCHHHHHHHHHHHHhccCCcceEEE--CCcCC--CCCcccHHHH
Confidence 44568999999999876 455655431 00 00023577889999999997654 665 44210 0013355667
Q ss_pred HHHHHh-----cCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 286 LSMRRA-----FEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 286 ~~ir~~-----~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
+.+++. +++||++...+ +++++.++++.+.+|+|.+
T Consensus 289 ~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~i 330 (413)
T 1kko_A 289 TAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQI 330 (413)
T ss_dssp HHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 778888 78999998877 8999999999999999875
No 266
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.81 E-value=0.0059 Score=53.69 Aligned_cols=85 Identities=12% Similarity=-0.049 Sum_probs=61.7
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
.++++.+...++..+-++........... ....++.+++..+.|+++.|++ +++++.++++.| +|.|.+|++++..|
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~~~g~-~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G-~~~~~vg~a~~~~~ 210 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAG-ADAALAASVFHFRE 210 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTCCSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHT-CSEEEESHHHHTTS
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCccccc-cHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcC-cHHHhhhHHHHcCC
Confidence 45666777777765544332111111112 2566788888889999999999 799999999988 99999999999999
Q ss_pred chHHHHHh
Q 017733 330 DLPKRFEL 337 (367)
Q Consensus 330 ~l~~k~~~ 337 (367)
.-+.++++
T Consensus 211 ~~~~~~~~ 218 (237)
T 3cwo_X 211 IDVRELKE 218 (237)
T ss_dssp SCHHHHHH
T ss_pred CCHHHHHH
Confidence 77776654
No 267
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=96.77 E-value=0.003 Score=56.75 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=49.6
Q ss_pred hHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 281 TQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 281 ~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
..+.++.+|+.+ +.||+.+||| |+++++++++ | +|.|.+|.++..||+...++.+.
T Consensus 173 ~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-g-AD~VVVGSai~~~~~~~~e~v~~ 230 (235)
T 3w01_A 173 DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-I-ADTIIVGDIIYKDIKKALKTVKI 230 (235)
T ss_dssp CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-T-SSEEEECTHHHHCHHHHHHTTCC
T ss_pred CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-C-CCEEEECCceecCHHHHHHHHHH
Confidence 467889999998 8999999999 8999998876 6 99999999999999998887653
No 268
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=96.74 E-value=0.0094 Score=58.79 Aligned_cols=102 Identities=9% Similarity=0.137 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHh-------CCc-ceEEEeCCCcccc--ccC-------C----CChHHHHHHHHHHhhh-cCccEEEEec
Q 017733 212 ALEVVEAVVREI-------GAE-RVGMRLSPYAECA--EAV-------D----SNPEALGLYMAKALNK-FKLLYLHVIE 269 (367)
Q Consensus 212 ~~eii~aiR~~v-------g~~-~i~vrls~~~~~~--~~~-------~----~~~~~~~~~l~~~L~~-~Gvd~i~v~~ 269 (367)
..+.|++||+++ |++ .|.|.....+.|. ... + ..+.++++++++.|++ .++.||+ +
T Consensus 225 d~~~l~avreav~~agy~pG~dv~L~vDaaas~~~~~~n~~y~~~~n~~~~~~~~t~~eai~~~~~l~~~~~i~~iE--e 302 (444)
T 1w6t_A 225 TEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIE--D 302 (444)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCEEEEE--S
T ss_pred HHHHHHHHHHHHHHhccCCCCCcEEEEEccchhcccccCCceeeccccCcccCCCCHHHHHHHHHHHHHhCCcEEEE--C
Confidence 367888888888 776 5777773332221 000 0 0356888999999864 8888887 4
Q ss_pred CCccccCCchhhHHHHHHHHHhc--CCcEEEeCC-C-CHHHHHHHHHcCCCcEEcc
Q 017733 270 PRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGG-Y-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Gg-i-t~~~a~~~L~~G~~D~V~~ 321 (367)
|. .+.+....+.+++.+ ++||++... + +++++.++++.+.+|+|.+
T Consensus 303 Pl------~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 352 (444)
T 1w6t_A 303 GM------DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILI 352 (444)
T ss_dssp CS------CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CC------ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEE
Confidence 42 223456677899988 789988877 5 7999999999999999876
No 269
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=96.73 E-value=0.0088 Score=55.85 Aligned_cols=111 Identities=18% Similarity=0.150 Sum_probs=68.8
Q ss_pred ccCCCCCCCc--hhhHhHHH---HHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEe
Q 017733 195 NDRTDEYGGS--LENRCRFA---LEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVI 268 (367)
Q Consensus 195 N~R~D~yGgs--~enr~r~~---~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~ 268 (367)
|+|...+..- ..|-..+. .+-++++|+..++. .+.+-.. +.++..+. .+.|+|+|-++
T Consensus 161 ~hr~~l~d~vlik~~Hi~~~g~~~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A----~~aGaD~I~ld 224 (299)
T 2jbm_A 161 SHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFALKVEVECS------------SLQEAVQA----AEAGADLVLLD 224 (299)
T ss_dssp CCCCSTTSSEEECHHHHHHHTSHHHHHHHHHHHHTTTSCEEEEES------------SHHHHHHH----HHTTCSEEEEE
T ss_pred ceecCccceEEecccHHHHcCCHHHHHHHHHHhCCcCCeEEEecC------------CHHHHHHH----HHcCCCEEEEC
Confidence 4555554442 12333333 67889999999853 4555221 23443332 24799999876
Q ss_pred cCCccccCCchhhH-HHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 269 EPRMIQLTDKSETQ-RSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 269 ~~~~~~~~~~~~~~-~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
... +... ...+.++... ++++.++||+|++.+.++++.| +|.+++|......|
T Consensus 225 ~~~-------~~~l~~~v~~l~~~~~~~~I~ASGGIt~~ni~~~~~aG-aD~i~vGs~i~~a~ 279 (299)
T 2jbm_A 225 NFK-------PEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPH-IDVISMGMLTQAAP 279 (299)
T ss_dssp SCC-------HHHHHHHHHHHHHHCTTSEEEEESSCCTTTHHHHCCTT-CCEEECTHHHHSCC
T ss_pred CCC-------HHHHHHHHHHhhccCCCeeEEEECCCCHHHHHHHHHCC-CCEEEEChhhcCCC
Confidence 421 1111 1223333322 2689999999999999999999 89999999665434
No 270
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=96.69 E-value=0.002 Score=60.88 Aligned_cols=106 Identities=16% Similarity=0.066 Sum_probs=72.4
Q ss_pred hCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHH
Q 017733 171 AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALG 250 (367)
Q Consensus 171 aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~ 250 (367)
.||..++|..|.. + .+--.+.+++||+++++..|.+..|. ..+.+++
T Consensus 127 ~G~~~~KiKvG~~--------------------~----~~~d~~~v~avr~~~~~~~l~vDaN~---------~~~~~~A 173 (322)
T 1r6w_A 127 PGEKVAKVRVGLY--------------------E----AVRDGMVVNLLLEAIPDLHLRLDANR---------AWTPLKG 173 (322)
T ss_dssp CSSEEEEEECSSS--------------------C----HHHHHHHHHHHHHHCTTEEEEEECTT---------CBCHHHH
T ss_pred CCCceEEEEeCCC--------------------C----HHHHHHHHHHHHHhCCCCeEEEeCCC---------CCCHHHH
Confidence 6999999986531 1 33457899999999942145554443 2357789
Q ss_pred HHHHHHhhhc---CccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 251 LYMAKALNKF---KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 251 ~~l~~~L~~~---Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
..+++.|++. ++.||+ +|. . ..+..+.+++.+++||.+...+ +.+ + +.++.+.+|+|.+
T Consensus 174 ~~~~~~l~~~~~~~i~~iE--qP~-----~---~~~~~~~l~~~~~ipIa~dE~~~~~~-~-~~~~~~a~d~i~i 236 (322)
T 1r6w_A 174 QQFAKYVNPDYRDRIAFLE--EPC-----K---TRDDSRAFARETGIAIAWDESLREPD-F-AFVAEEGVRAVVI 236 (322)
T ss_dssp HHHHHTSCTTTGGGEEEEE--CCB-----S---SHHHHHHHHHHHCCCEEESGGGGSTT-C-CCCCCTTEEEEEE
T ss_pred HHHHHHhhhhccCCeeEEE--CCC-----C---ChHHHHHHHHhCCCCEEeCCCCCChh-H-hhhhcCCCCEEEE
Confidence 9999999998 888887 442 1 1344677888888998887776 633 3 4456666776654
No 271
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.69 E-value=0.012 Score=58.55 Aligned_cols=123 Identities=16% Similarity=0.066 Sum_probs=77.5
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
+.+..+.++|.|.+-+..++|+ ..-.++.++.+|+..+ -++.++=-.
T Consensus 231 ~~a~~l~~~gvd~lvvdta~G~------------------------~~~~L~~I~~l~~~~~-vpvi~k~v~-------- 277 (486)
T 2cu0_A 231 KRAIELDKAGVDVIVVDTAHAH------------------------NLKAIKSMKEMRQKVD-ADFIVGNIA-------- 277 (486)
T ss_dssp HHHHHHHHTTCSEEEEECSCCC------------------------CHHHHHHHHHHHHTCC-SEEEEEEEC--------
T ss_pred HHHHHHHHhcCCceEEEecCCc------------------------EeehhhHHHHHHHHhC-CccccCCcC--------
Confidence 5566778899999887765542 0123567788888772 355432111
Q ss_pred CCChHHHHHHHHHHhhhcCccEEEEecCCcccc------CCchhh---HHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHH
Q 017733 243 DSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL------TDKSET---QRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVA 312 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~------~~~~~~---~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~ 312 (367)
+.+ -++.|. |+|.+.+..+.-... .-..+. ...+..+.+.+++|||+.||+ +..++.++|.
T Consensus 278 ---~~~----~a~~l~--G~d~v~vg~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia~GGi~~~~di~kala 348 (486)
T 2cu0_A 278 ---NPK----AVDDLT--FADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIA 348 (486)
T ss_dssp ---CHH----HHTTCT--TSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEEESCCCSHHHHHHHHH
T ss_pred ---CHH----HHHHhh--CCCeEEEeeeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEecCCCCCHHHHHHHHH
Confidence 122 233444 999998822211100 000111 223345566668999999999 8999999999
Q ss_pred cCCCcEEcccHHHHhC
Q 017733 313 ANYTDLVAFGRLFLAN 328 (367)
Q Consensus 313 ~G~~D~V~~gR~~lad 328 (367)
.| +|.|++|++++.-
T Consensus 349 lG-A~~v~~g~~~~~~ 363 (486)
T 2cu0_A 349 AG-ADAVMLGNLLAGT 363 (486)
T ss_dssp TT-CSEEEESTTTTTB
T ss_pred cC-CCceeeChhhhcC
Confidence 98 9999999999853
No 272
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.00093 Score=61.26 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=64.5
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhC--
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLAN-- 328 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~lad-- 328 (367)
.++++.+.+.|++.+|+..-+. .+...++.+.+.+++||...||++..+++++| .| +|-|.++..++.|
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~~~pv~vgGGir~~~~~~~l-~G-a~~Viigs~a~~~~g 111 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQESPQFLQVGGGINDTNCLEWL-KW-ASKVIVTSWLFTKEG 111 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHSTTTSEEESSCCTTTHHHHT-TT-CSCEEECGGGBCTTC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcCCceEEEeCCCCHHHHHHHh-cC-CCEEEECcHHHhhcC
Confidence 3578888889999998853221 35567888999999999999999434999999 88 9999999999999
Q ss_pred ---CchHHHHHhC
Q 017733 329 ---PDLPKRFELN 338 (367)
Q Consensus 329 ---P~l~~k~~~g 338 (367)
|++..++.+-
T Consensus 112 ~~~p~~~~~~~~~ 124 (260)
T 2agk_A 112 HFQLKRLERLTEL 124 (260)
T ss_dssp CBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999988653
No 273
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=96.68 E-value=0.017 Score=53.86 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCc-hhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGS-LENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs-~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
++..+.+++.+++|.+||.|-.+. ..+|....+|. +.. ..-..+.|++++++ +.+ .|.-|.-...
T Consensus 104 ~~v~~~v~~l~~aGaagv~iED~~-----------~~krcGh~~gk~l~~-~~e~~~rI~Aa~~A-~~~~~I~ARtda~~ 170 (305)
T 3ih1_A 104 LNVARTAVEMVEAKVAAVQIEDQQ-----------LPKKCGHLNGKKLVT-TEELVQKIKAIKEV-APSLYIVARTDARG 170 (305)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBC-----------SSCCTTCTTCCCBCC-HHHHHHHHHHHHHH-CTTSEEEEEECCHH
T ss_pred HHHHHHHHHHHHhCCcEEEECCCC-----------CCcccCCCCCCcccC-HHHHHHHHHHHHHc-CCCeEEEEeecccc
Confidence 356778888899999999998765 24565554542 332 23345667777777 544 4555664310
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe---CCCCH-HHHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA---GGYSR-DEGNKAVA 312 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L~ 312 (367)
....+++++-++.++++|+|.|-+... +..+.++.+.+.+++|++++ ++-+| -..+++-+
T Consensus 171 -------~~g~~~ai~Ra~ay~eAGAD~i~~e~~---------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~ 234 (305)
T 3ih1_A 171 -------VEGLDEAIERANAYVKAGADAIFPEAL---------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFAN 234 (305)
T ss_dssp -------HHCHHHHHHHHHHHHHHTCSEEEETTC---------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHH
T ss_pred -------ccCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHH
Confidence 112677888899999999998876322 23466888999999998765 33332 23556666
Q ss_pred cCCCcEEcccHHHH
Q 017733 313 ANYTDLVAFGRLFL 326 (367)
Q Consensus 313 ~G~~D~V~~gR~~l 326 (367)
-| +.+|..+-.++
T Consensus 235 lG-v~~v~~~~~~~ 247 (305)
T 3ih1_A 235 MG-FQMVIYPVTSL 247 (305)
T ss_dssp TT-CSEEEECSHHH
T ss_pred cC-CCEEEEchHHH
Confidence 77 89998885544
No 274
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.66 E-value=0.015 Score=51.61 Aligned_cols=116 Identities=14% Similarity=0.141 Sum_probs=72.2
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe--CCCcccccc
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL--SPYAECAEA 241 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl--s~~~~~~~~ 241 (367)
+++.+.++|+|.|-+|+.-| .+.+++..+...+..++|-+ +..
T Consensus 77 ~v~~~~~~GaD~vTvh~~~G-----------------------------~~~l~~~~~~~~~~~~~V~~lts~~------ 121 (213)
T 1vqt_A 77 SIKSWDHPAIIGFTVHSCAG-----------------------------YESVERALSATDKHVFVVVKLTSME------ 121 (213)
T ss_dssp HHHHHCCTTEEEEEEEGGGC-----------------------------HHHHHHHHHHCSSEEEEECCCTTSC------
T ss_pred HHHHHHHCCCCEEEEeccCC-----------------------------HHHHHHHHHhcCCCeEEEEEeCCCC------
Confidence 44555579999999997543 12444444444322344432 221
Q ss_pred CCCChH-HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHH----------HHHH
Q 017733 242 VDSNPE-ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDE----------GNKA 310 (367)
Q Consensus 242 ~~~~~~-~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~----------a~~~ 310 (367)
.. . +....+++. .+.|+|++. + + ..++.+|+.++.+ +..+|+.++. .++
T Consensus 122 --~~-l~~~v~~~a~~-~e~G~dvV~-~----------~---~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~- 181 (213)
T 1vqt_A 122 --GS-LEDYMDRIEKL-NKLGCDFVL-P----------G---PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE- 181 (213)
T ss_dssp --CC-HHHHHHHHHHH-HHHTCEEEC-C----------H---HHHHHHTTTCCSC-EEECCBC---------CCBCHHH-
T ss_pred --HH-HHHHHHHHHHH-hcCCCEEEE-c----------H---HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-
Confidence 11 2 556677887 888998332 1 1 3456688887777 7778886554 467
Q ss_pred HHcCCCcEEcccHHHHhCCchHHHH
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k~ 335 (367)
++.| +|+|.+||+.+..+|-...+
T Consensus 182 i~aG-ad~iVvGR~I~~a~dP~~aa 205 (213)
T 1vqt_A 182 MKGI-ANFAVLGREIYLSENPREKI 205 (213)
T ss_dssp HTTT-CSEEEESHHHHTSSCHHHHH
T ss_pred HHCC-CCEEEEChhhcCCCCHHHHH
Confidence 8888 99999999999877754443
No 275
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=96.63 E-value=0.0032 Score=59.58 Aligned_cols=107 Identities=8% Similarity=0.058 Sum_probs=76.0
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCCh
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~ 246 (367)
.+++.||..++|..+. + .+--.+.|++||+ +...|.|..|. ..+
T Consensus 118 ~~~~~G~~~~KiKvg~---------------------~----~~~d~~~v~avr~--~~~~l~vDaN~---------~~~ 161 (330)
T 3caw_A 118 GLKNEGYNTVKVKMGR---------------------D----LQKEADMLTHIAA--SGMRMRLDFNA---------LGS 161 (330)
T ss_dssp HHHHHTCCEEEEECSS---------------------C----HHHHHHHHHHHHH--TTCEEEEECTT---------CSC
T ss_pred HHHHcCCcEEEEecCC---------------------C----HHHHHHHHHHHhC--CCCeEEEECCC---------CCC
Confidence 4456799999997642 1 2334788999999 32246665554 335
Q ss_pred HHHHHHHHHHhhh---cCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 247 EALGLYMAKALNK---FKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 247 ~~~~~~l~~~L~~---~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
.+++..+++.|++ .++.||+ ++- ....+.... ++ .+ +||.+... +.+++.++++.+.+|+|.+
T Consensus 162 ~~~A~~~~~~l~~~~~~~l~~iE--qP~-----~~~~d~~~~--l~-~~-iPIa~dEs-~~~~~~~~i~~~a~d~v~~ 227 (330)
T 3caw_A 162 WQTFEKFMVNLPLTVRPLIEYVE--DPF-----PFDFHAWGE--AR-KL-AKIALDNQ-YDKVPWGKIASAPFDVIVI 227 (330)
T ss_dssp HHHHHHHHHTSCTTTGGGEEEEE--CCS-----SCCHHHHHH--HT-TT-SCEEESTT-GGGCCTTTCSSCSCSEEEE
T ss_pred HHHHHHHHHHhhhhccCCceEEE--CCC-----CCCccHHHH--HH-hc-CcEEeCCC-CHHHHHHHHHcCCCCEEEe
Confidence 7889999999999 8999888 442 111022222 77 77 99999888 8899999999999998876
No 276
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=96.62 E-value=0.013 Score=57.50 Aligned_cols=102 Identities=9% Similarity=0.106 Sum_probs=72.0
Q ss_pred HHHHHHHHHHH---hCCc-ceEEEeCCCcccccc-----CCCChHHHHHHHHHH-hhhcCccEEEEecCCccccCCchhh
Q 017733 212 ALEVVEAVVRE---IGAE-RVGMRLSPYAECAEA-----VDSNPEALGLYMAKA-LNKFKLLYLHVIEPRMIQLTDKSET 281 (367)
Q Consensus 212 ~~eii~aiR~~---vg~~-~i~vrls~~~~~~~~-----~~~~~~~~~~~l~~~-L~~~Gvd~i~v~~~~~~~~~~~~~~ 281 (367)
+.-++++||++ +|++ .|++.....+.|.+. ....+.+++..+++. +++.++.||+ +|. .+.+
T Consensus 221 l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~IE--dPl------~~dD 292 (428)
T 3tqp_A 221 FELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISIE--DGL------SEND 292 (428)
T ss_dssp HHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEEE--CCS------CTTC
T ss_pred HHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceEe--CCC------Cccc
Confidence 34458999999 8877 588888654433221 113467788889987 8899988887 441 2234
Q ss_pred HHHHHHHHHhcCCcEEEeC-C-C--CHHHHHHHHHcCCCcEEcc
Q 017733 282 QRSLLSMRRAFEGTFIAAG-G-Y--SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~G-g-i--t~~~a~~~L~~G~~D~V~~ 321 (367)
....+.+++.++.||..+| . + +++++.++|+.+.+|+|.+
T Consensus 293 ~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~i 336 (428)
T 3tqp_A 293 WAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILV 336 (428)
T ss_dssp HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEe
Confidence 5667789998886764333 3 3 6999999999999998865
No 277
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=96.60 E-value=0.047 Score=49.26 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=84.5
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc--ceEEEeCCCcccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE--RVGMRLSPYAECA 239 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~--~i~vrls~~~~~~ 239 (367)
.+.++...++|+|-|-|+... -+. .++++++-+..|+. .+++...-..++.
T Consensus 87 ~e~~~~~l~~GadkVii~t~a-----------------------~~~----p~li~e~~~~~g~q~iv~~iD~~~~~~~~ 139 (243)
T 4gj1_A 87 KEEVKALLDCGVKRVVIGSMA-----------------------IKD----ATLCLEILKEFGSEAIVLALDTILKEDYV 139 (243)
T ss_dssp HHHHHHHHHTTCSEEEECTTT-----------------------TTC----HHHHHHHHHHHCTTTEEEEEEEEESSSEE
T ss_pred HHHHHHHHHcCCCEEEEcccc-----------------------ccC----CchHHHHHhcccCceEEEEEEEEeCCCCE
Confidence 567788889999999987543 011 34455556667765 3444331111111
Q ss_pred --ccCCC-ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcC
Q 017733 240 --EAVDS-NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAAN 314 (367)
Q Consensus 240 --~~~~~-~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G 314 (367)
-.+|. .+.....++++.+++.|+.-+-++.-....+.. .++.+.++.+++.+ ++||+++||+ +.++.+++ +.+
T Consensus 140 v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~-G~d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l-~~~ 217 (243)
T 4gj1_A 140 VAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQ-GVNVRLYKLIHEIFPNICIQASGGVASLKDLENL-KGI 217 (243)
T ss_dssp EC--------CCBHHHHHHHHHTTTCCEEEEEETTC------CCCHHHHHHHHHHCTTSEEEEESCCCSHHHHHHT-TTT
T ss_pred EEecCceecccchHHHHHHHHhhcCCcEEEeeeeccccccc-CCCHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHH-Hcc
Confidence 00111 111123567888899998877665332221111 23567788899887 5899999999 89998775 555
Q ss_pred CCcEEcccHHHHhCC
Q 017733 315 YTDLVAFGRLFLANP 329 (367)
Q Consensus 315 ~~D~V~~gR~~ladP 329 (367)
++.|.+|++|...-
T Consensus 218 -~~gvivg~Al~~g~ 231 (243)
T 4gj1_A 218 -CSGVIVGKALLDGV 231 (243)
T ss_dssp -CSEEEECHHHHTTS
T ss_pred -CchhehHHHHHCCC
Confidence 89999999987654
No 278
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=96.59 E-value=0.008 Score=58.73 Aligned_cols=102 Identities=4% Similarity=0.109 Sum_probs=71.7
Q ss_pred HHHHHH-HHHHHHhC--Cc-ceEEEeCCCccccccCC-----CChHHHHHHHHHH-hhhcCccEEEEecCCccccCCchh
Q 017733 211 FALEVV-EAVVREIG--AE-RVGMRLSPYAECAEAVD-----SNPEALGLYMAKA-LNKFKLLYLHVIEPRMIQLTDKSE 280 (367)
Q Consensus 211 ~~~eii-~aiR~~vg--~~-~i~vrls~~~~~~~~~~-----~~~~~~~~~l~~~-L~~~Gvd~i~v~~~~~~~~~~~~~ 280 (367)
-.++.| ++||++ | ++ .|++..+..+.|.+..+ ..+.+++..+.+. ++++++.||+ +|. .+.
T Consensus 219 e~l~~i~~Air~a-Gy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~i~~IE--dPl------~~d 289 (417)
T 3qn3_A 219 EPIDLLMTCIKKA-GYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYPICSIE--DGL------AEN 289 (417)
T ss_dssp HHHHHHHHHHHHT-TCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEE--SSS------CTT
T ss_pred HHHHHHHHHHHHc-CCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcceeEEe--cCC------Ccc
Confidence 356666 899998 7 55 57887776544332111 1246778888886 7889988887 441 123
Q ss_pred hHHHHHHHHHhc--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEcc
Q 017733 281 TQRSLLSMRRAF--EGTFIAAGGY-S-RDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 281 ~~~~~~~ir~~~--~~pvi~~Ggi-t-~~~a~~~L~~G~~D~V~~ 321 (367)
+....+.+++.+ ++||++...+ | ++++.++|+.+.||+|.+
T Consensus 290 D~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 334 (417)
T 3qn3_A 290 DFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLI 334 (417)
T ss_dssp CHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred cHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEe
Confidence 456677788888 5787776666 6 999999999999999865
No 279
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=96.58 E-value=0.0046 Score=53.79 Aligned_cols=67 Identities=13% Similarity=0.105 Sum_probs=54.6
Q ss_pred HHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 253 MAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 253 l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
-.+.+.....|++++-.+ . .+..++.+++.+++|||++|.+ |.++++++|++| +|.|+.+...+++-
T Consensus 119 ~~~~i~~~~PD~iEiLPG------i---~p~iI~~i~~~~~~PiIaGGlI~~~edv~~al~aG-A~aVsTs~~~LW~~ 186 (192)
T 3kts_A 119 GVALIQKVQPDCIELLPG------I---IPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASG-AIAVTTSNKHLWEG 186 (192)
T ss_dssp HHHHHHHHCCSEEEEECT------T---CHHHHHHHHHHHCCCEEEESSCCSHHHHHHHHTTT-EEEEEECCGGGGTT
T ss_pred HHHHHhhcCCCEEEECCc------h---hHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcC-CeEEEeCCHHHhCc
Confidence 445555667799987522 1 2367899999999999999999 899999999999 99999999888764
No 280
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=96.55 E-value=0.061 Score=49.85 Aligned_cols=123 Identities=12% Similarity=0.043 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~~~----~~~~gr~pviaGvg--- 77 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTG----------------ESPTLSKSEHEQVVEITI----KTANGRVPVIAGAG--- 77 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGG----------------TGGGSCHHHHHHHHHHHH----HHHTTSSCBEEECC---
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHH----HHhCCCCcEEEecC---
Confidence 3455556667789999999766543 222 24556665554444 444333 5554333
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEE------eC-CCCHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIA------AG-GYSRDEGNK 309 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~------~G-git~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+. +| .++++...+
T Consensus 78 -------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 149 (292)
T 2vc6_A 78 -------SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP-TQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLAR 149 (292)
T ss_dssp -------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred -------CccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHH
Confidence 23467789999999999999998877765433 2333345667888999999887 34 358998888
Q ss_pred HHH
Q 017733 310 AVA 312 (367)
Q Consensus 310 ~L~ 312 (367)
+.+
T Consensus 150 La~ 152 (292)
T 2vc6_A 150 IFE 152 (292)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 281
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.54 E-value=0.0041 Score=54.92 Aligned_cols=70 Identities=13% Similarity=0.067 Sum_probs=50.8
Q ss_pred cCccEEEEecC--CccccC-CchhhHHHHHHHHHh--cCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 260 FKLLYLHVIEP--RMIQLT-DKSETQRSLLSMRRA--FEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 260 ~Gvd~i~v~~~--~~~~~~-~~~~~~~~~~~ir~~--~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
.|+||+-++.- +.+.+. ..+.....++.+++. .++||++.||++++.+.++++.| ++.|++++++...+|
T Consensus 106 ~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~G-a~gVav~s~i~~~~d 180 (210)
T 3ceu_A 106 HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFG-FGGAVVLGDLWNKFD 180 (210)
T ss_dssp GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTT-CSEEEESHHHHTTCC
T ss_pred hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhC-CCEEEEhHHhHcCCC
Confidence 79999987421 111111 112245667778877 58999999999999999999998 999999999987543
No 282
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=96.52 E-value=0.036 Score=50.34 Aligned_cols=125 Identities=13% Similarity=0.105 Sum_probs=85.6
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
...+..+|.|+|-|.++. | ++ .-+.++++.+++. |- .+.|-++-
T Consensus 116 i~ea~~~GAD~ilLi~a~-------l-------~~----------~~l~~l~~~a~~l-Gl-~~lvEv~~---------- 159 (251)
T 1i4n_A 116 VKLASSVGADAILIIARI-------L-------TA----------EQIKEIYEAAEEL-GM-DSLVEVHS---------- 159 (251)
T ss_dssp HHHHHHTTCSEEEEEGGG-------S-------CH----------HHHHHHHHHHHTT-TC-EEEEEECS----------
T ss_pred HHHHHHcCCCEEEEeccc-------C-------CH----------HHHHHHHHHHHHc-CC-eEEEEeCC----------
Confidence 334788999999998764 1 11 2356677777763 42 45555542
Q ss_pred ChHHHHHHHHHHhhhc-CccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEc
Q 017733 245 NPEALGLYMAKALNKF-KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~-Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 320 (367)
.++ ++...+. |+|+|-+..+++..... .......+.+.+ +.++|+-||| |++++..+.+. +|.|.
T Consensus 160 --~eE----~~~A~~l~g~~iIGinnr~l~t~~~---d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avL 228 (251)
T 1i4n_A 160 --RED----LEKVFSVIRPKIIGINTRDLDTFEI---KKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK--VNAVL 228 (251)
T ss_dssp --HHH----HHHHHTTCCCSEEEEECBCTTTCCB---CTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHTTT--CSEEE
T ss_pred --HHH----HHHHHhcCCCCEEEEeCcccccCCC---CHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEE
Confidence 333 2334467 99999998776543221 234455566666 3578999999 89999999877 99999
Q ss_pred ccHHHHhCCchHHHHH
Q 017733 321 FGRLFLANPDLPKRFE 336 (367)
Q Consensus 321 ~gR~~ladP~l~~k~~ 336 (367)
+|.+++..+|....++
T Consensus 229 VG~aimr~~d~~~~~~ 244 (251)
T 1i4n_A 229 VGTSIMKAENPRRFLE 244 (251)
T ss_dssp ECHHHHHCSSHHHHHH
T ss_pred EcHHHcCCcCHHHHHH
Confidence 9999999988766655
No 283
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.51 E-value=0.087 Score=47.97 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
+..+.|+.+++.|+|.||+-..+ |. .- .....+.+.+..+|+..++.|+.+-++...+
T Consensus 33 e~l~~a~~~~~~~aD~vElR~D~-------l~----~~---------~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~E-- 90 (258)
T 4h3d_A 33 DIIKEAKELKDACLDIIEWRVDF-------FE----NV---------ENIKEVKEVLYELRSYIHDIPLLFTFRSVVE-- 90 (258)
T ss_dssp HHHHHHHHHTTSSCSEEEEEGGG-------CT----TT---------TCHHHHHHHHHHHHHHCTTSCEEEECCCGGG--
T ss_pred HHHHHHHHHhhcCCCEEEEeecc-------cc----cc---------CCHHHHHHHHHHHHHhcCCCCEEEEEechhh--
Confidence 44556677788999999987653 11 10 1245688999999999986677766665322
Q ss_pred ccCCCChHHHHHHHHHHhhhcC-ccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe-CCC--CH--HH----HHH
Q 017733 240 EAVDSNPEALGLYMAKALNKFK-LLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA-GGY--SR--DE----GNK 309 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~G-vd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggi--t~--~~----a~~ 309 (367)
+.....+.++...+.+.+...| +||+++-... .......+....+.-...||++ ..+ || ++ ..+
T Consensus 91 GG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~------~~~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~ 164 (258)
T 4h3d_A 91 GGEKLISRDYYTTLNKEISNTGLVDLIDVELFM------GDEVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCR 164 (258)
T ss_dssp TCSCCCCHHHHHHHHHHHHHTTCCSEEEEEGGG------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCchhhHHhhhc------cHHHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHH
Confidence 1112335566777777777766 9999984221 1111111212222334566655 455 44 33 345
Q ss_pred HHHcCCCcEEccc
Q 017733 310 AVAANYTDLVAFG 322 (367)
Q Consensus 310 ~L~~G~~D~V~~g 322 (367)
+.+.| +|+|=++
T Consensus 165 ~~~~g-aDIvKia 176 (258)
T 4h3d_A 165 MQELG-ADLPKIA 176 (258)
T ss_dssp HHHTT-CSEEEEE
T ss_pred HHHhC-CCEEEEE
Confidence 55666 7876554
No 284
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=96.50 E-value=0.0024 Score=59.49 Aligned_cols=47 Identities=15% Similarity=0.072 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCCcEE--EeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 282 QRSLLSMRRAFEGTFI--AAGGY-SRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi--~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
...++.+++.++.|++ +.||+ +++++.++++.| +|.|.+|++++..+
T Consensus 196 ~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~~aG-adgvvvGsai~~~~ 245 (297)
T 2zbt_A 196 FELVKWVHDHGRLPVVNFAAGGIATPADAALMMHLG-MDGVFVGSGIFKSG 245 (297)
T ss_dssp HHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHHHTT-CSEEEECGGGGGSS
T ss_pred HHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHHHcC-CCEEEEchHHhCCC
Confidence 4567788888888987 99999 999999999998 99999999999543
No 285
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=96.41 E-value=0.072 Score=49.68 Aligned_cols=124 Identities=18% Similarity=0.163 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++.. +++.++.. +|.+=++
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttG----------------E~~~Lt~~Er~~v~~~----~~~~~~grvpviaGvg---- 92 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTG----------------ESPTTTDGEKIELLRA----VLEAVGDRARVIAGAG---- 92 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTT----------------TGGGSCHHHHHHHHHH----HHHHHTTTSEEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------chhhCCHHHHHHHHHH----HHHHhCCCCeEEEeCC----
Confidence 444555566679999999876554 222 245666655544 44444333 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
..+.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...++
T Consensus 93 ------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 93 ------TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKP-PQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRAL 165 (304)
T ss_dssp ------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 23567899999999999999998877766543 233344567788888999977542 3 488888887
Q ss_pred HHcC
Q 017733 311 VAAN 314 (367)
Q Consensus 311 L~~G 314 (367)
.+..
T Consensus 166 a~~p 169 (304)
T 3l21_A 166 ASHP 169 (304)
T ss_dssp HTST
T ss_pred hcCC
Confidence 7443
No 286
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.36 E-value=0.11 Score=48.47 Aligned_cols=126 Identities=14% Similarity=0.166 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..+++++. |..+|.+=++
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~eEr~~vi~~~~~~~~---grvpViaGvg---- 89 (306)
T 1o5k_A 33 ESYERLVRYQLENGVNALIVLGTTG----------------ESPTVNEDEREKLVSRTLEIVD---GKIPVIVGAG---- 89 (306)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGG----------------TGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECC----
T ss_pred HHHHHHHHHHHHcCCCEEEeCcccc----------------chhhCCHHHHHHHHHHHHHHhC---CCCeEEEcCC----
Confidence 3455556667789999999876553 222 245566655555444433 2225554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 90 ------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 162 (306)
T 1o5k_A 90 ------TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKP-TQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARI 162 (306)
T ss_dssp ------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred ------CccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHH
Confidence 23567789999999999999998877765433 223334566778888899977532 3 488888888
Q ss_pred H-HcC
Q 017733 311 V-AAN 314 (367)
Q Consensus 311 L-~~G 314 (367)
. +..
T Consensus 163 a~~~p 167 (306)
T 1o5k_A 163 AADLK 167 (306)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 7 543
No 287
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.36 E-value=0.063 Score=50.39 Aligned_cols=124 Identities=12% Similarity=0.059 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..+ ++.++.. +|.+=++
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTG----------------E~~~Ls~~Er~~v~~~~----v~~~~grvpViaGvg---- 101 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTG----------------EGAYLSDPEWDEVVDFT----LKTVAHRVPTIVSVS---- 101 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGG----------------TGGGSCHHHHHHHHHHH----HHHHTTSSCBEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHH----HHHhCCCCcEEEecC----
Confidence 344445555679999999876554 222 2455666555444 4444333 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...++
T Consensus 102 ------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 102 ------DLTTAKTVRRAQFAESLGAEAVMVLPISYWKL-NEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEECCCCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 23567899999999999999998877765533 223344567788899999977543 2 478888887
Q ss_pred -HHcC
Q 017733 311 -VAAN 314 (367)
Q Consensus 311 -L~~G 314 (367)
.+..
T Consensus 175 ~a~~p 179 (315)
T 3na8_A 175 VREVD 179 (315)
T ss_dssp HHHST
T ss_pred HhcCC
Confidence 4443
No 288
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=96.36 E-value=0.1 Score=48.57 Aligned_cols=123 Identities=12% Similarity=0.077 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+++..+.|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~eEr~~v~~~~~----~~~~grvpViaGvg---- 89 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTG----------------ESPTLTSEEKVALYRHVV----SVVDKRVPVIAGTG---- 89 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTT----------------TGGGSCHHHHHHHHHHHH----HHHTTSSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHH----HHhCCCceEEeCCC----
Confidence 445555566779999999876543 222 24566665555444 444333 5554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 90 ------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 162 (301)
T 1xky_A 90 ------SNNTHASIDLTKKATEVGVDAVMLVAPYYNKP-SQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRL 162 (301)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 23567789999999999999998877765433 223344566788888899977632 3 488888888
Q ss_pred HHc
Q 017733 311 VAA 313 (367)
Q Consensus 311 L~~ 313 (367)
.+.
T Consensus 163 a~~ 165 (301)
T 1xky_A 163 SEI 165 (301)
T ss_dssp HTS
T ss_pred HcC
Confidence 654
No 289
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=96.33 E-value=0.13 Score=47.63 Aligned_cols=130 Identities=13% Similarity=0.089 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+.+.+-+....++|.|||-+.+.-| |+- -|.+.|.+++. .+++.++.. +|.+=++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~----~~~~~~~gr~pviaGvg--- 77 (289)
T 2yxg_A 21 DGLEENINFLIENGVSGIVAVGTTG----------------ESPTLSHEEHKKVIE----KVVDVVNGRVQVIAGAG--- 77 (289)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTT----------------TGGGSCHHHHHHHHH----HHHHHHTTSSEEEEECC---
T ss_pred HHHHHHHHHHHHCCCCEEEECcccc----------------ChhhCCHHHHHHHHH----HHHHHhCCCCcEEEeCC---
Confidence 3455556666789999999876543 222 24556655544 444444333 5554333
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...+
T Consensus 78 -------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 149 (289)
T 2yxg_A 78 -------SNCTEEAIELSVFAEDVGADAVLSITPYYNKP-TQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKL 149 (289)
T ss_dssp -------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHH
Confidence 23567789999999999999998877766433 233344566788888999977632 3 48888888
Q ss_pred HH-HcCCCcEEcc
Q 017733 310 AV-AANYTDLVAF 321 (367)
Q Consensus 310 ~L-~~G~~D~V~~ 321 (367)
+. +.. .+|++
T Consensus 150 La~~~p--nivgi 160 (289)
T 2yxg_A 150 LAEEYS--NISAV 160 (289)
T ss_dssp HHHHCT--TEEEE
T ss_pred HHHhCC--CEEEE
Confidence 87 543 34443
No 290
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=96.33 E-value=0.016 Score=56.07 Aligned_cols=98 Identities=17% Similarity=0.114 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCch-hhHHHHHHH
Q 017733 210 RFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKS-ETQRSLLSM 288 (367)
Q Consensus 210 r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~i 288 (367)
.++.++|+++|+. + .++.+.+++. .. .+.++.+.+.|+|++.++..........+ ..+..+..+
T Consensus 142 ~~~~~~i~~~~~~-g-~~v~~~v~~~---------~~----~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l 206 (393)
T 2qr6_A 142 ELLSERIAQVRDS-G-EIVAVRVSPQ---------NV----REIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEF 206 (393)
T ss_dssp HHHHHHHHHHHHT-T-SCCEEEECTT---------TH----HHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHH
T ss_pred HHHHHHHHHHhhc-C-CeEEEEeCCc---------cH----HHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHH
Confidence 4567788888886 3 3566666541 11 23566677789999977643211111111 123346788
Q ss_pred HHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccH
Q 017733 289 RRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 289 r~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 323 (367)
++.+++||++.|..|+++++.+++.| +|.|.+++
T Consensus 207 ~~~~~~pvi~ggi~t~e~a~~~~~~G-ad~i~vg~ 240 (393)
T 2qr6_A 207 IGSLDVPVIAGGVNDYTTALHMMRTG-AVGIIVGG 240 (393)
T ss_dssp HHHCSSCEEEECCCSHHHHHHHHTTT-CSEEEESC
T ss_pred HHhcCCCEEECCcCCHHHHHHHHHcC-CCEEEECC
Confidence 89899999995555999999999998 99999976
No 291
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=96.32 E-value=0.053 Score=50.41 Aligned_cols=146 Identities=12% Similarity=0.016 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttG----------------E~~~Ls~~Er~~v~~~~~----~~~~grvpviaGvg--- 77 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTG----------------ESPTLTEEEHKRVVALVA----EQAQGRVPVIAGAG--- 77 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGG----------------TGGGSCHHHHHHHHHHHH----HHHTTSSCBEEECC---
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc----------------chhhCCHHHHHHHHHHHH----HHhCCCCeEEEccC---
Confidence 3455556666779999999866543 222 24556665555444 444333 5554333
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...+
T Consensus 78 -------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 149 (297)
T 2rfg_A 78 -------SNNPVEAVRYAQHAQQAGADAVLCVAGYYNRP-SQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMAR 149 (297)
T ss_dssp -------CSSHHHHHHHHHHHHHHTCSEEEECCCTTTCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHH
Confidence 23567789999999999999998876765433 233344566788888999977532 3 48888888
Q ss_pred HHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 310 AVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
+.+.. .+|++ .-...|..-..++++-
T Consensus 150 La~~p--nIvgi-Kds~gd~~~~~~~~~~ 175 (297)
T 2rfg_A 150 LAALP--RIVGV-KDATTDLARISRERML 175 (297)
T ss_dssp HHTST--TEEEE-EECSCCTTHHHHHHTT
T ss_pred HHcCC--CEEEE-EeCCCCHHHHHHHHHh
Confidence 87543 34444 1112344455566543
No 292
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.30 E-value=0.11 Score=48.51 Aligned_cols=129 Identities=17% Similarity=0.197 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..+ ++.++.. +|.+=++
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~eEr~~v~~~~----~~~~~grvpViaGvg---- 88 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTG----------------EAFVQSLSEREQVLEIV----AEEAKGKIKLIAHVG---- 88 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTT----------------TGGGSCHHHHHHHHHHH----HHHHTTTSEEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECeecc----------------ChhhCCHHHHHHHHHHH----HHHhCCCCcEEEecC----
Confidence 444555566779999999876543 322 2456666555444 4444333 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeC-----C--CCHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.++++ +||+.-. | ++++...+
T Consensus 89 ------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~ 161 (303)
T 2wkj_A 89 ------CVSTAESQQLAASAKRYGFDAVSAVTPFYYPF-SFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINT 161 (303)
T ss_dssp ------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhCCCCEEEecCCCCCCC-CHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHH
Confidence 23567789999999999999998877766433 23333456677888888 9977632 3 48888888
Q ss_pred HHHcCCCcEEcc
Q 017733 310 AVAANYTDLVAF 321 (367)
Q Consensus 310 ~L~~G~~D~V~~ 321 (367)
+.+.. .+|++
T Consensus 162 La~~p--nIvgi 171 (303)
T 2wkj_A 162 LVTLP--GVGAL 171 (303)
T ss_dssp HHTST--TEEEE
T ss_pred HhcCC--CEEEE
Confidence 87543 34443
No 293
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.27 E-value=0.0057 Score=56.64 Aligned_cols=113 Identities=14% Similarity=0.078 Sum_probs=66.9
Q ss_pred cccCCCCCCCc--hhhHhHH---HHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEE
Q 017733 194 VNDRTDEYGGS--LENRCRF---ALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHV 267 (367)
Q Consensus 194 ~N~R~D~yGgs--~enr~r~---~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v 267 (367)
.|+|.+-+-+- ..|-..+ +.+.++++|+..|+. +|.|-.. +.+++.+ ..++|+|+|-+
T Consensus 156 ~nHR~gL~d~vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~------------tleea~e----A~~aGaD~I~L 219 (285)
T 1o4u_A 156 DPHRLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVE------------NLEDALR----AVEAGADIVML 219 (285)
T ss_dssp C--------CEEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEES------------SHHHHHH----HHHTTCSEEEE
T ss_pred CCccCCCcccEEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeC------------CHHHHHH----HHHcCCCEEEE
Confidence 35665544442 2344444 467888888888864 6776332 2444433 34579999987
Q ss_pred ecCCccccCCchhhHHHHHHHHHh-cCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 268 IEPRMIQLTDKSETQRSLLSMRRA-FEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~ir~~-~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
...+ ........+.++.. .++++.++||+|++.+.++.+.| +|+|++|.....-|
T Consensus 220 Dn~~------~e~l~~av~~l~~~~~~v~ieASGGIt~eni~~~a~tG-VD~IsvGslt~sa~ 275 (285)
T 1o4u_A 220 DNLS------PEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFET-VDVISSSRLTLQEV 275 (285)
T ss_dssp ESCC------HHHHHHHHHHHHHHCTTSEEEEEECCCTTTGGGGCCTT-CCEEEEGGGTSSCC
T ss_pred CCCC------HHHHHHHHHHhhccCCCceEEEECCCCHHHHHHHHHcC-CCEEEEeHHHcCCC
Confidence 6421 11112233334432 15789999999999999999998 99999998655433
No 294
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=96.27 E-value=0.033 Score=54.89 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=70.5
Q ss_pred HHHHH-HHHHHH---hCCc-ceEEEeCCCccccc------cCC---CChHHHHHHHHHH-hhhcCccEEEEecCCccccC
Q 017733 212 ALEVV-EAVVRE---IGAE-RVGMRLSPYAECAE------AVD---SNPEALGLYMAKA-LNKFKLLYLHVIEPRMIQLT 276 (367)
Q Consensus 212 ~~eii-~aiR~~---vg~~-~i~vrls~~~~~~~------~~~---~~~~~~~~~l~~~-L~~~Gvd~i~v~~~~~~~~~ 276 (367)
.++.| ++||++ +|++ .|++..+..+.|.. ..+ ..+.+++.++++. |++.++.||+ +|.
T Consensus 242 ~l~~i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y~i~~IE--dPl----- 314 (449)
T 3uj2_A 242 AIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERYPIVSIE--DGL----- 314 (449)
T ss_dssp HHHHHHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHSCEEEEE--SCS-----
T ss_pred HHHHHHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhcCceEEE--CCC-----
Confidence 44544 899999 8877 68888876433321 000 1256778888865 8899988887 441
Q ss_pred CchhhHHHHHHHHHhc--CCcEEEeCCC-C-HHHHHHHHHcCCCcEEcc
Q 017733 277 DKSETQRSLLSMRRAF--EGTFIAAGGY-S-RDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 277 ~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t-~~~a~~~L~~G~~D~V~~ 321 (367)
.+.+....+.+++.+ ++||++-..+ | ++++.++|+.+.+|+|.+
T Consensus 315 -~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~i 362 (449)
T 3uj2_A 315 -DEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILI 362 (449)
T ss_dssp -CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred -CcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEE
Confidence 223456677788888 5666655455 4 999999999999999865
No 295
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.26 E-value=0.041 Score=48.71 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=38.2
Q ss_pred HHHHHHHHHhcC-CcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchH
Q 017733 282 QRSLLSMRRAFE-GTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLP 332 (367)
Q Consensus 282 ~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~ 332 (367)
..+++.++..++ +|++..||++++.+.++++.| +.++..| .++..|+++
T Consensus 147 ~~~lkal~~p~p~i~~~ptGGI~~~N~~~~l~aG-a~~~vgG-s~l~~~~~i 196 (217)
T 3lab_A 147 AKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLP-NVICAGG-SWLTESKLL 196 (217)
T ss_dssp HHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHST-TBCCEEE-SGGGCHHHH
T ss_pred HHHHHHHHhhhcCceEEEeCCCCHHHHHHHHHCC-CEEEEEC-hhhcChhHH
Confidence 467888888884 789999999999999999999 6666555 455555543
No 296
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.24 E-value=0.073 Score=47.53 Aligned_cols=136 Identities=14% Similarity=0.128 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEe
Q 017733 154 IPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRL 232 (367)
Q Consensus 154 I~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrl 232 (367)
|...++.|++ .+.++|+|.|-+|+..| ...+...++.+++. |.. .+...+
T Consensus 76 ipnTv~~~~~---~~~~~gad~vtvh~~~G-------------------------~~~l~~~~~~~~~~-g~~v~vLt~~ 126 (228)
T 3m47_A 76 IPETNEKICR---ATFKAGADAIIVHGFPG-------------------------ADSVRACLNVAEEM-GREVFLLTEM 126 (228)
T ss_dssp CHHHHHHHHH---HHHHTTCSEEEEESTTC-------------------------HHHHHHHHHHHHHH-TCEEEEECCC
T ss_pred cHhHHHHHHH---HHHhCCCCEEEEeccCC-------------------------HHHHHHHHHHHHhc-CCCeEEEEeC
Confidence 3333444444 44568999999997543 12234445555442 332 222344
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHH--HHHH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRD--EGNK 309 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~--~a~~ 309 (367)
+.. +.. ....+....+++...+.|++-+-++ . . ....++.+|+..+. -++.+.|+.++ +. +
T Consensus 127 s~~-~~~----~~~~~~~~~~a~~a~~~G~~GvV~~-a------t---~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~ 190 (228)
T 3m47_A 127 SHP-GAE----MFIQGAADEIARMGVDLGVKNYVGP-S------T---RPERLSRLREIIGQDSFLISPGVGAQGGDP-G 190 (228)
T ss_dssp CSG-GGG----TTHHHHHHHHHHHHHHTTCCEEECC-S------S---CHHHHHHHHHHHCSSSEEEECC----------
T ss_pred CCc-cHH----HHHHHHHHHHHHHHHHhCCcEEEEC-C------C---ChHHHHHHHHhcCCCCEEEecCcCcCCCCH-h
Confidence 431 110 1112334566777778888765432 1 1 22456778888764 45567777443 55 7
Q ss_pred HHHcCCCcEEcccHHHHhCCchHHHH
Q 017733 310 AVAANYTDLVAFGRLFLANPDLPKRF 335 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l~~k~ 335 (367)
+++.| +|++.+||+.+..+|....+
T Consensus 191 ~~~aG-ad~iVvGr~I~~a~dp~~a~ 215 (228)
T 3m47_A 191 ETLRF-ADAIIVGRSIYLADNPAAAA 215 (228)
T ss_dssp CGGGT-CSEEEECHHHHTSSCHHHHH
T ss_pred HHHcC-CCEEEECHHHhCCCCHHHHH
Confidence 78888 89999999999877654433
No 297
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.24 E-value=0.0072 Score=56.29 Aligned_cols=109 Identities=11% Similarity=0.073 Sum_probs=60.2
Q ss_pred cccCCCCCCCch--hhHhHH---HHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEE
Q 017733 194 VNDRTDEYGGSL--ENRCRF---ALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHV 267 (367)
Q Consensus 194 ~N~R~D~yGgs~--enr~r~---~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v 267 (367)
.|+|...+..-+ .|-..+ ..+-++++|+..++. .+.+-.. +.++..+.+ +.|+|+|-+
T Consensus 162 ~~hr~~l~d~vlik~nh~~~~g~i~~ai~~~r~~~~~~~~i~vev~------------tlee~~~A~----~aGaD~I~l 225 (294)
T 3c2e_A 162 DTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECL------------SEDEATEAI----EAGADVIML 225 (294)
T ss_dssp BCCCCSTTTSEEECHHHHHHHSSHHHHHHHHHHHHCTTSCEEEECS------------SSHHHHHHH----HHTCSEEEC
T ss_pred CceecCccceEEeecchhhhcCCHHHHHHHHHHhcCcCCeEEEecC------------CHHHHHHHH----HcCCCEEEE
Confidence 456666655532 344444 577889999999853 4555221 123333322 469999987
Q ss_pred ecCCccccCCchhhHHHHHHHHHhc--------CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 268 IEPRMIQLTDKSETQRSLLSMRRAF--------EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~ir~~~--------~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
+... ...++.+++.+ .+++.++||+|++.+.++++.| +|.+++|......|
T Consensus 226 d~~~----------~~~l~~~v~~l~~~~~g~~~v~I~ASGGIt~~ni~~~~~~G-vD~i~vGs~i~~a~ 284 (294)
T 3c2e_A 226 DNFK----------GDGLKMCAQSLKNKWNGKKHFLLECSGGLNLDNLEEYLCDD-IDIYSTSSIHQGTP 284 (294)
T ss_dssp CC-------------------------------CCEEEEECCCCC------CCCS-CSEEECGGGTSSCC
T ss_pred CCCC----------HHHHHHHHHHhcccccCCCCeEEEEECCCCHHHHHHHHHcC-CCEEEEechhcCCC
Confidence 5321 12223222322 2789999999999999999999 89999998754434
No 298
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.24 E-value=0.088 Score=49.37 Aligned_cols=123 Identities=20% Similarity=0.129 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..+++++.. ..+|.+=++
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg----- 99 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTG----------------ESPTLTHEEHKRIIELCVEQVAK---RVPVVAGAG----- 99 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTT----------------TGGGSCHHHHHHHHHHHHHHHTT---SSCBEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------CccccCHHHHHHHHHHHHHHhCC---CCcEEEeCC-----
Confidence 444555556679999998766543 222 2456666555554444432 225555333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~L 311 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++.
T Consensus 100 -----~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 173 (315)
T 3si9_A 100 -----SNSTSEAVELAKHAEKAGADAVLVVTPYYNRP-NQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLC 173 (315)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHH
Confidence 33577899999999999999998877765533 222344567788898999977542 2 4889888888
Q ss_pred H
Q 017733 312 A 312 (367)
Q Consensus 312 ~ 312 (367)
+
T Consensus 174 ~ 174 (315)
T 3si9_A 174 R 174 (315)
T ss_dssp H
T ss_pred h
Confidence 7
No 299
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=96.24 E-value=0.28 Score=46.22 Aligned_cols=178 Identities=11% Similarity=0.089 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH-
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAA- 165 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA- 165 (367)
++.+.++++.++++|-++++.+.|+...+.|... ..|.+ + ..++.++...-+.+|++.+
T Consensus 59 ~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q------~~p~~-----------W---~~~~~~~~~~~~~~yt~~v~ 118 (334)
T 1fob_A 59 LDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQ------TTPSG-----------W---STTDLGTLKWQLYNYTLEVC 118 (334)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBC------BCCTT-----------S---CSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccc------cCccc-----------c---ccCChHHHHHHHHHHHHHHH
Confidence 5688999999999999999998775433322110 11111 1 1245566666666665544
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh--CCcceEEEeCCCccccccCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI--GAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v--g~~~i~vrls~~~~~~~~~~ 243 (367)
.+.+++|....-+..++- +-..++.|- -++ ...++..+++.+.+++||+.. +.-.|.+-+.. +
T Consensus 119 ~~l~~~g~~v~~v~vGNE-~~~G~lwp~--g~~----~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~-------~- 183 (334)
T 1fob_A 119 NTFAENDIDIEIISIGNE-IRAGLLWPL--GET----SSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDD-------G- 183 (334)
T ss_dssp HHHHHTTCCCSEEEESSS-GGGCSSBTT--TST----TCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC-------T-
T ss_pred HHHHhCCCCCCEEEEeec-CcccccCCC--Ccc----hhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCC-------c-
Confidence 444556643322333443 111233221 111 146788999999999999987 42255554432 0
Q ss_pred CChHHHHHHHHHHhhhcC------ccEEEEecCCccccCCch-hhHHHHHHHHHhcCCcEEEeC
Q 017733 244 SNPEALGLYMAKALNKFK------LLYLHVIEPRMIQLTDKS-ETQRSLLSMRRAFEGTFIAAG 300 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~G------vd~i~v~~~~~~~~~~~~-~~~~~~~~ir~~~~~pvi~~G 300 (367)
. ..+....+...+...| +|+|-++--.+......+ .....++.+.++..+||+.+.
T Consensus 184 ~-~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~itE 246 (334)
T 1fob_A 184 W-SWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVE 246 (334)
T ss_dssp T-CHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred C-chHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 1 1233344444444444 688887632222111111 223456677777889977663
No 300
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.21 E-value=0.12 Score=47.89 Aligned_cols=144 Identities=8% Similarity=0.086 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~~~----~~~~gr~pviaGvg---- 78 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTG----------------ESATLNHDEHADVVMMTL----DLADGRIPVIAGTG---- 78 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTT----------------TGGGSCHHHHHHHHHHHH----HHHTTSSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------chhhCCHHHHHHHHHHHH----HHhCCCCcEEEecC----
Confidence 444555566778999999876543 222 24556665555444 444333 5554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 79 ------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 79 ------ANATAEAISLTQRFNDSGIVGCLTVTPYYNRP-SQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRL 151 (292)
T ss_dssp ------CSSHHHHHHHHHHTTTSSCSEEEEECCCSSCC-CHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHH
T ss_pred ------CccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHH
Confidence 23567789999999999999998877765433 233344566778888899977632 3 488888888
Q ss_pred HHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
.+.. .+|++ .-...|..-..++++
T Consensus 152 a~~p--nivgi-K~s~gd~~~~~~~~~ 175 (292)
T 2ojp_A 152 AKVK--NIIGI-XEATGNLTRVNQIKE 175 (292)
T ss_dssp HTST--TEEEC--CCSCCTHHHHHHHT
T ss_pred HcCC--CEEEE-eCCCCCHHHHHHHHH
Confidence 7443 34544 222234444555554
No 301
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=96.20 E-value=0.074 Score=49.85 Aligned_cols=130 Identities=12% Similarity=0.091 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-++...++|.|||-+.+.-| |+- -|.+.|.+++..+++.+. |..+|.+=.+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~~Er~~v~~~~v~~~~---grvpViaGvg----- 100 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTG----------------ESATLDVEEHIQVIRRVVDQVK---GRIPVIAGTG----- 100 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGG----------------TGGGCCHHHHHHHHHHHHHHHT---TSSCEEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHHHHhC---CCCcEEEeCC-----
Confidence 344444455679999999876554 222 255666655555554443 2225555333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~L 311 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...++.
T Consensus 101 -----~~st~eai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 174 (314)
T 3qze_A 101 -----ANSTREAVALTEAAKSGGADACLLVTPYYNKP-TQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLS 174 (314)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred -----CcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHh
Confidence 33567899999999999999998877766533 223344567788888999977542 2 4888888877
Q ss_pred HcCCCcEEcc
Q 017733 312 AANYTDLVAF 321 (367)
Q Consensus 312 ~~G~~D~V~~ 321 (367)
+.. .+|++
T Consensus 175 ~~p--nIvgi 182 (314)
T 3qze_A 175 KVP--NIIGI 182 (314)
T ss_dssp TST--TEEEE
T ss_pred cCC--CEEEE
Confidence 443 34444
No 302
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.20 E-value=0.062 Score=49.65 Aligned_cols=136 Identities=16% Similarity=0.111 Sum_probs=89.6
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe---CCCcccc-
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL---SPYAECA- 239 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl---s~~~~~~- 239 (367)
.+++|.++||+-|-+.+.+ -++|...+.+.++++..++. |- .|-.-| ...++..
T Consensus 95 ~i~~ai~~GFtSVMiDgS~--------------------~p~eeNi~~Tk~vv~~ah~~-gv-sVEaElG~vgG~Ed~~~ 152 (288)
T 3q94_A 95 KCKEAIDAGFTSVMIDASH--------------------HPFEENVETTKKVVEYAHAR-NV-SVEAELGTVGGQEDDVI 152 (288)
T ss_dssp HHHHHHHHTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESBCBCSCSSCG
T ss_pred HHHHHHHcCCCeEEEeCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeccccCCcC
Confidence 4567778899999988766 14677889999999988864 21 222222 2222211
Q ss_pred c-cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchh--hHHHHHHHHHhcCCcEEEeCC--CCHHHHHHHHHcC
Q 017733 240 E-AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE--TQRSLLSMRRAFEGTFIAAGG--YSRDEGNKAVAAN 314 (367)
Q Consensus 240 ~-~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~--~~~~~~~ir~~~~~pvi~~Gg--it~~~a~~~L~~G 314 (367)
+ .....+++++.+|++ +.|+|++-++-++.+..++..+ ..+.++.|++.+++|++.=|+ +..++..++++.|
T Consensus 153 ~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~G 229 (288)
T 3q94_A 153 AEGVIYADPAECKHLVE---ATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLG 229 (288)
T ss_dssp GGGCBCCCHHHHHHHHH---HHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTT
T ss_pred CccccCCCHHHHHHHHH---HHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcC
Confidence 1 011335677777765 5799999998887655443322 456789999999999776654 5789999999999
Q ss_pred CCcEEcccHHH
Q 017733 315 YTDLVAFGRLF 325 (367)
Q Consensus 315 ~~D~V~~gR~~ 325 (367)
+-=|=++..+
T Consensus 230 -v~KiNi~Tdl 239 (288)
T 3q94_A 230 -TSKINVNTEN 239 (288)
T ss_dssp -EEEEEECHHH
T ss_pred -CeEEEEChHH
Confidence 3344444443
No 303
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.20 E-value=0.094 Score=47.46 Aligned_cols=129 Identities=12% Similarity=0.081 Sum_probs=84.8
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
..|+.+|.|+|-|-++. |++ .-+.++++..++ .|=+ +.|-++-
T Consensus 120 ~eAr~~GADaILLI~a~-------L~~-----------------~~l~~l~~~A~~-lGl~-~LvEVh~----------- 162 (258)
T 4a29_A 120 DDAYNLGADTVLLIVKI-------LTE-----------------RELESLLEYARS-YGME-PLILIND----------- 162 (258)
T ss_dssp HHHHHHTCSEEEEEGGG-------SCH-----------------HHHHHHHHHHHH-TTCC-CEEEESS-----------
T ss_pred HHHHHcCCCeeehHHhh-------cCH-----------------HHHHHHHHHHHH-HhHH-HHHhcch-----------
Confidence 34567899999987765 221 123455555443 4432 3444432
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCCC-CHHHHHHHHHcCCCcEEccc
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGGY-SRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~g 322 (367)
.++ +- +..+.|.+.|-|-+++...... .......+.+.++ ..+|+-+|| |++++..+.+.| +|.|.+|
T Consensus 163 -~~E---l~-rAl~~~a~iIGINNRnL~tf~v---dl~~t~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G-~~a~LVG 233 (258)
T 4a29_A 163 -END---LD-IALRIGARFIGIMSRDFETGEI---NKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLG-VNAFLIS 233 (258)
T ss_dssp -HHH---HH-HHHHTTCSEEEECSBCTTTCCB---CHHHHHHHHTTSCTTSEEEEEESSCCHHHHHHHHHTT-CCEEEEC
T ss_pred -HHH---HH-HHhcCCCcEEEEeCCCcccccc---CHHHHHHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCC-CCEEEEC
Confidence 232 22 2234688999887776543332 3345566777764 457777888 899999999999 9999999
Q ss_pred HHHHhCCchHHHHHhCCC
Q 017733 323 RLFLANPDLPKRFELNAP 340 (367)
Q Consensus 323 R~~ladP~l~~k~~~g~~ 340 (367)
..++..||-.+++.+|..
T Consensus 234 ealmr~~d~~~~Li~G~~ 251 (258)
T 4a29_A 234 SSLMRNPEKIKELIEGSL 251 (258)
T ss_dssp HHHHHCTTHHHHHHC---
T ss_pred HHHhCCCcHHHHHHcCch
Confidence 999999999999998853
No 304
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=96.20 E-value=0.08 Score=49.18 Aligned_cols=130 Identities=18% Similarity=0.146 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..+++++. |..+|.+=++
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~~~~~~~---grvpviaGvg----- 84 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTG----------------ESATLSVEEHTAVIEAVVKHVA---KRVPVIAGTG----- 84 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTT----------------TGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------CcccCCHHHHHHHHHHHHHHhC---CCCcEEEeCC-----
Confidence 344445556679999999877554 222 245666655554444443 2225555333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~L 311 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.++++.||+.-. + ++++...++.
T Consensus 85 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 85 -----ANNTVEAIALSQAAEKAGADYTLSVVPYYNKP-SQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp -----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred -----CcCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 33577899999999999999998877765533 222334567788888999977542 2 4888887776
Q ss_pred HcCCCcEEcc
Q 017733 312 AANYTDLVAF 321 (367)
Q Consensus 312 ~~G~~D~V~~ 321 (367)
+.. .+|++
T Consensus 159 ~~p--nivgi 166 (297)
T 3flu_A 159 EIP--NIVGV 166 (297)
T ss_dssp TST--TEEEE
T ss_pred cCC--CEEEE
Confidence 433 34444
No 305
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.20 E-value=0.13 Score=48.74 Aligned_cols=129 Identities=13% Similarity=0.153 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..+ ++.++.. +|.+=++.
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~eEr~~vi~~~----ve~~~grvpViaGvg~--- 109 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGG----------------EFSQLGAEERKAIARFA----IDHVDRRVPVLIGTGG--- 109 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTT----------------TGGGSCHHHHHHHHHHH----HHHHTTSSCEEEECCS---
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------ChhhCCHHHHHHHHHHH----HHHhCCCCcEEEecCC---
Confidence 445555566779999999876543 322 2456665555444 4444333 55543332
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 110 -------~st~eai~la~~A~~~Gadavlv~~P~Y~~~-s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~L 181 (343)
T 2v9d_A 110 -------TNARETIELSQHAQQAGADGIVVINPYYWKV-SEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTL 181 (343)
T ss_dssp -------SCHHHHHHHHHHHHHHTCSEEEEECCSSSCC-CHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHH
Confidence 3567789999999999999998877766433 233344566788888899977532 3 488888888
Q ss_pred H-HcCCCcEEcc
Q 017733 311 V-AANYTDLVAF 321 (367)
Q Consensus 311 L-~~G~~D~V~~ 321 (367)
. +.. .+|++
T Consensus 182 a~~~p--nIvgi 191 (343)
T 2v9d_A 182 ADSRS--NIIGI 191 (343)
T ss_dssp HHHCT--TEEEE
T ss_pred HHhCC--CEEEE
Confidence 7 543 34444
No 306
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=96.19 E-value=0.14 Score=48.27 Aligned_cols=129 Identities=16% Similarity=0.087 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++ +.+++.++.. +|.+=++.
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~eEr~~vi----~~~ve~~~grvpViaGvg~--- 112 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTG----------------IYMYLTREERRRAI----EAAATILRGRRTLMAGIGA--- 112 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTT----------------TGGGSCHHHHHHHH----HHHHHHHTTSSEEEEEECC---
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHH----HHHHHHhCCCCcEEEecCC---
Confidence 344455566678999999876543 322 2455565554 4444445433 55553333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 113 -------~st~eai~la~~A~~~Gadavlv~~P~Y~~~-s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 113 -------LRTDEAVALAKDAEAAGADALLLAPVSYTPL-TQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRL 184 (332)
T ss_dssp -------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCC-CHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 3567789999999999999998876665432 223344566788888999977642 3 488888888
Q ss_pred HHcCCCcEEcc
Q 017733 311 VAANYTDLVAF 321 (367)
Q Consensus 311 L~~G~~D~V~~ 321 (367)
.+.. .+|++
T Consensus 185 a~~p--nIvgi 193 (332)
T 2r8w_A 185 AYIP--NIRAI 193 (332)
T ss_dssp HTST--TEEEE
T ss_pred HcCC--CEEEE
Confidence 7543 34544
No 307
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=96.19 E-value=0.15 Score=47.19 Aligned_cols=130 Identities=13% Similarity=0.086 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
+.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++.. +++.++.. +|.+=++
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~----~~~~~~grvpviaGvg--- 77 (294)
T 2ehh_A 21 EALGNLIEFHVDNGTDAILVCGTTG----------------ESPTLTFEEHEKVIEF----AVKRAAGRIKVIAGTG--- 77 (294)
T ss_dssp HHHHHHHHHHHTTTCCEEEESSTTT----------------TGGGSCHHHHHHHHHH----HHHHHTTSSEEEEECC---
T ss_pred HHHHHHHHHHHHCCCCEEEECcccc----------------ChhhCCHHHHHHHHHH----HHHHhCCCCcEEEecC---
Confidence 3455556666779999999876543 222 245566555444 44444333 5554333
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe------C-CCCHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA------G-GYSRDEGNK 309 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~------G-git~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.- | .++++...+
T Consensus 78 -------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 149 (294)
T 2ehh_A 78 -------GNATHEAVHLTAHAKEVGADGALVVVPYYNKP-TQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFK 149 (294)
T ss_dssp -------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHH
Confidence 23567789999999999999998877765433 23334456678888899997753 2 248998888
Q ss_pred HH-HcCCCcEEcc
Q 017733 310 AV-AANYTDLVAF 321 (367)
Q Consensus 310 ~L-~~G~~D~V~~ 321 (367)
+. +.. .+|++
T Consensus 150 La~~~p--nivgi 160 (294)
T 2ehh_A 150 LASECE--NIVAS 160 (294)
T ss_dssp HHHHCT--TEEEE
T ss_pred HHhhCC--CEEEE
Confidence 87 543 34443
No 308
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.17 E-value=0.3 Score=45.07 Aligned_cols=134 Identities=13% Similarity=0.089 Sum_probs=87.0
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe---CCCcccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL---SPYAECA 239 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl---s~~~~~~ 239 (367)
+.+++|.++||.-|-+.+.+ -++|...+.+.++++..++. | -.|-.-| ...++..
T Consensus 88 e~i~~ai~~GFtSVMiDgS~--------------------lp~eeNi~~Tk~vv~~ah~~-g-vsVEaElG~vgg~ed~~ 145 (286)
T 1gvf_A 88 DDIRRKVHAGVRSAMIDGSH--------------------FPFAENVKLVKSVVDFCHSQ-D-CSVEAELGRLGGVEDDM 145 (286)
T ss_dssp HHHHHHHHTTCCEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-T-CEEEEEESCCC------
T ss_pred HHHHHHHHcCCCeEEECCCC--------------------CCHHHHHHHHHHHHHHHHHc-C-CEEEEEEeeccCcccCc
Confidence 44556677899999887765 14677899999999999875 2 1222222 2212111
Q ss_pred c-c---CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchh--hHHHHHHHHHhcCCcEEEeC--CCCHHHHHHHH
Q 017733 240 E-A---VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE--TQRSLLSMRRAFEGTFIAAG--GYSRDEGNKAV 311 (367)
Q Consensus 240 ~-~---~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~--~~~~~~~ir~~~~~pvi~~G--git~~~a~~~L 311 (367)
. . ....+++++.+|++ +.|+|++-++-++.+..+...+ ..+.++.|++.+++|++.=| |+..++..+++
T Consensus 146 ~~~~~~~~~T~Peea~~Fv~---~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai 222 (286)
T 1gvf_A 146 SVDAESAFLTDPQEAKRFVE---LTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTI 222 (286)
T ss_dssp -----CCSSCCHHHHHHHHH---HHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHH
T ss_pred ccccccccCCCHHHHHHHHH---HHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHH
Confidence 0 0 11245677777765 4799999998887665543322 34678999999999977666 46788999999
Q ss_pred HcCCCcEEccc
Q 017733 312 AANYTDLVAFG 322 (367)
Q Consensus 312 ~~G~~D~V~~g 322 (367)
+.|. -=|=++
T Consensus 223 ~~Gv-~KiNi~ 232 (286)
T 1gvf_A 223 ELGV-TKVNVA 232 (286)
T ss_dssp HTTE-EEEEEC
T ss_pred HCCC-eEEEEC
Confidence 9993 334443
No 309
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=96.16 E-value=0.072 Score=49.60 Aligned_cols=71 Identities=13% Similarity=-0.003 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHH-----------HHHHHHHcC
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRD-----------EGNKAVAAN 314 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~-----------~a~~~L~~G 314 (367)
.+....+++...+.|+|.+-.+ + .. ++.||+.++. .++.++|+.++ ...++++.|
T Consensus 157 ~e~V~~lA~~a~~~G~dGvV~s-~---------~E---~~~IR~~~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aG 223 (303)
T 3ru6_A 157 EEAVINFSKISYENGLDGMVCS-V---------FE---SKKIKEHTSSNFLTLTPGIRPFGETNDDQKRVANLAMARENL 223 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEECC-T---------TT---HHHHHHHSCTTSEEEECCCCTTC--------CCSHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-H---------HH---HHHHHHhCCCccEEECCCcCcccCCcccccccCCHHHHHHcC
Confidence 3445677887788899876432 1 01 4578888753 57778888543 467889999
Q ss_pred CCcEEcccHHHHhCCch
Q 017733 315 YTDLVAFGRLFLANPDL 331 (367)
Q Consensus 315 ~~D~V~~gR~~ladP~l 331 (367)
+|++.+||+.+..+|-
T Consensus 224 -Ad~iVvGr~I~~a~dp 239 (303)
T 3ru6_A 224 -SDYIVVGRPIYKNENP 239 (303)
T ss_dssp -CSEEEECHHHHTSSCH
T ss_pred -CCEEEEChHHhCCCCH
Confidence 9999999999986654
No 310
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.15 E-value=0.015 Score=51.60 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHH
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
.+++..+++.|.+.|+..|+++..+ +...+.++.+++.++..+|+.|-+ |+++++++++.| ++||.. |-
T Consensus 24 ~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AG-A~fivs--P~ 93 (217)
T 3lab_A 24 LVHAIPMAKALVAGGVHLLEVTLRT-------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAG-AQFIVS--PG 93 (217)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT-CSEEEE--SS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCC-------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcC-CCEEEe--CC
Confidence 4668899999999999999996442 234577889999998888988887 999999999999 898865 22
Q ss_pred HhCCchHHHHHh
Q 017733 326 LANPDLPKRFEL 337 (367)
Q Consensus 326 ladP~l~~k~~~ 337 (367)
.+|++++..++
T Consensus 94 -~~~evi~~~~~ 104 (217)
T 3lab_A 94 -LTPELIEKAKQ 104 (217)
T ss_dssp -CCHHHHHHHHH
T ss_pred -CcHHHHHHHHH
Confidence 47777766553
No 311
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.15 E-value=0.098 Score=46.02 Aligned_cols=122 Identities=14% Similarity=0.074 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce-EEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV-GMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i-~vrls~~~~~ 238 (367)
...+.|+.+.++|++++.+. ..+.|++||+.++ .++ ++......+.
T Consensus 24 ~~~~~a~~~~~~Ga~~i~~~--------------------------------~~~~i~~i~~~~~-~pv~~~~~~~~~~~ 70 (223)
T 1y0e_A 24 IMSKMALAAYEGGAVGIRAN--------------------------------TKEDILAIKETVD-LPVIGIVKRDYDHS 70 (223)
T ss_dssp HHHHHHHHHHHHTCSEEEEE--------------------------------SHHHHHHHHHHCC-SCEEEECBCCCTTC
T ss_pred cHHHHHHHHHHCCCeeeccC--------------------------------CHHHHHHHHHhcC-CCEEeeeccCCCcc
Confidence 45677788889999999752 0367999999884 343 3321110000
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
...-..+.+ -++.+.+.|+|+++++......+. ....+.++.+++.++...++.+-.|++++.++.+.| +|+
T Consensus 71 -~~~i~~~~~----~i~~~~~~Gad~v~l~~~~~~~p~--~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~~~~~G-~d~ 142 (223)
T 1y0e_A 71 -DVFITATSK----EVDELIESQCEVIALDATLQQRPK--ETLDELVSYIRTHAPNVEIMADIATVEEAKNAARLG-FDY 142 (223)
T ss_dssp -CCCBSCSHH----HHHHHHHHTCSEEEEECSCSCCSS--SCHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTT-CSE
T ss_pred -ccccCCcHH----HHHHHHhCCCCEEEEeeecccCcc--cCHHHHHHHHHHhCCCceEEecCCCHHHHHHHHHcC-CCE
Confidence 000011222 234456789999998754321111 123467888888874434444555899999999998 899
Q ss_pred Eccc
Q 017733 319 VAFG 322 (367)
Q Consensus 319 V~~g 322 (367)
|+++
T Consensus 143 i~~~ 146 (223)
T 1y0e_A 143 IGTT 146 (223)
T ss_dssp EECT
T ss_pred EEeC
Confidence 9764
No 312
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.15 E-value=0.08 Score=49.02 Aligned_cols=123 Identities=15% Similarity=0.181 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.++ ++.+++.++.. +|.+=++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v----~~~~~~~~~gr~pviaGvg---- 78 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTG----------------EASTLSMEEHTQV----IKEIIRVANKRIPIIAGTG---- 78 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTT----------------TGGGSCHHHHHHH----HHHHHHHHTTSSCEEEECC----
T ss_pred HHHHHHHHHHHCCCCEEEECcccc----------------ccccCCHHHHHHH----HHHHHHHhCCCCeEEEeCC----
Confidence 344444556679999998776554 221 245666544 44455555333 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.++++.||+.-. | ++++...++
T Consensus 79 ------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (291)
T 3tak_A 79 ------ANSTREAIELTKAAKDLGADAALLVTPYYNKP-TQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRL 151 (291)
T ss_dssp ------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHH
Confidence 33567899999999999999998877765533 223334567788888899977542 2 478888777
Q ss_pred HHc
Q 017733 311 VAA 313 (367)
Q Consensus 311 L~~ 313 (367)
.+.
T Consensus 152 a~~ 154 (291)
T 3tak_A 152 AEI 154 (291)
T ss_dssp TTS
T ss_pred HcC
Confidence 643
No 313
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.14 E-value=0.046 Score=50.55 Aligned_cols=113 Identities=15% Similarity=0.048 Sum_probs=71.0
Q ss_pred cccCCCCCCCc--hhhHhHH---HHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEe
Q 017733 194 VNDRTDEYGGS--LENRCRF---ALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVI 268 (367)
Q Consensus 194 ~N~R~D~yGgs--~enr~r~---~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~ 268 (367)
.|+|.+-+.+- ..|-..+ +.+.+++.|+..+..+|.|-+. +.+++. +..++|+|+|-++
T Consensus 158 ~nhR~gl~d~vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~------------t~eea~----eal~aGaD~I~LD 221 (284)
T 1qpo_A 158 VNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVD------------SLEQLD----AVLPEKPELILLD 221 (284)
T ss_dssp BCCCCSSSSSEEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEES------------SHHHHH----HHGGGCCSEEEEE
T ss_pred ccccccchhhhcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeC------------CHHHHH----HHHHcCCCEEEEC
Confidence 35566555443 2233333 2578888888887546666442 234333 3445799999876
Q ss_pred cCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 269 EPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
..+ ........+.++... +.++.++||+|++...++.+.| +|++++|.....-|
T Consensus 222 n~~------~~~~~~~v~~l~~~~~~v~ieaSGGIt~~~i~~~a~tG-VD~isvG~l~~~a~ 276 (284)
T 1qpo_A 222 NFA------VWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAETG-VDYLAVGALTHSVR 276 (284)
T ss_dssp TCC------HHHHHHHHHHHHHHCTTCEEEEESSCCTTTHHHHHHTT-CSEEECGGGTSSBC
T ss_pred CCC------HHHHHHHHHHhhccCCCeEEEEECCCCHHHHHHHHhcC-CCEEEECHHHcCCC
Confidence 431 111223344555422 4689999999999999999999 99999998554433
No 314
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.12 E-value=0.22 Score=46.85 Aligned_cols=146 Identities=17% Similarity=0.135 Sum_probs=83.0
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchh-hHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLE-NRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~e-nr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
.++++++.|.|+|.++.-.| .|. .-.++ ...+++.++.+++++.- -|+.+-+-++..- ..
T Consensus 115 sve~a~~~GADAVk~lv~~g--------------~d~-~~e~~~~q~~~l~rv~~ec~~~G--iPlllEil~y~~~--~~ 175 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYD--------------VDG-DPQVNVQKQAYIERIGSECQAED--IPFFLEILTYDET--IS 175 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEEC--------------TTS-CHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEECBTT--BS
T ss_pred CHHHHHHcCCCEEEEEEEcC--------------CCc-hHHHHHHHHHHHHHHHHHHHHcC--CceEEEEeccCCC--CC
Confidence 47788999999999987332 110 00111 23456777777776652 2444433221110 01
Q ss_pred CCC-------hHHHHHHHHHHh--hhcCccEEEEecCC-cc---cc------CCchhhHHHHHHHHHhcCCcE-EEeCCC
Q 017733 243 DSN-------PEALGLYMAKAL--NKFKLLYLHVIEPR-MI---QL------TDKSETQRSLLSMRRAFEGTF-IAAGGY 302 (367)
Q Consensus 243 ~~~-------~~~~~~~l~~~L--~~~Gvd~i~v~~~~-~~---~~------~~~~~~~~~~~~ir~~~~~pv-i~~Ggi 302 (367)
+.. ..+.....++.+ .+.|+|++-+--+. .. .. ++........+.+-+..++|+ +.+||.
T Consensus 176 ~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~ 255 (332)
T 3iv3_A 176 NNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV 255 (332)
T ss_dssp CTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC
T ss_pred CCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 111 133356778888 67799999874221 10 00 011111123445556678995 478888
Q ss_pred CHHH----HHHHHHcCCC--cEEcccHHHHhCC
Q 017733 303 SRDE----GNKAVAANYT--DLVAFGRLFLANP 329 (367)
Q Consensus 303 t~~~----a~~~L~~G~~--D~V~~gR~~ladP 329 (367)
+.++ .+.+++.| + ..|.+||....+.
T Consensus 256 ~~~~fl~~v~~A~~aG-a~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 256 SAELFQETLVFAHKAG-AKFNGVLCGRATWAGS 287 (332)
T ss_dssp CHHHHHHHHHHHHHHT-CCCCEEEECHHHHTTH
T ss_pred CHHHHHHHHHHHHHcC-CCcceEEeeHHHHHhh
Confidence 6544 46677888 6 8999999998874
No 315
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.10 E-value=0.15 Score=47.16 Aligned_cols=124 Identities=15% Similarity=0.117 Sum_probs=80.2
Q ss_pred HHHHHHHHHHH-hCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCc
Q 017733 160 DFRLAARNAIE-AGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYA 236 (367)
Q Consensus 160 ~f~~aA~~a~~-aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~ 236 (367)
.+.+-+....+ .|.|||-+.+.-| |+- -|.+.|.+++.. +++.++.. +|.+=.+
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~----~~~~~~grvpviaGvg--- 81 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTG----------------ENFMLSTEEKKEIFRI----AKDEAKDQIALIAQVG--- 81 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGG----------------TGGGSCHHHHHHHHHH----HHHHHTTSSEEEEECC---
T ss_pred HHHHHHHHHHhhCCCcEEEeCcccc----------------chhhCCHHHHHHHHHH----HHHHhCCCCeEEEecC---
Confidence 44455556677 9999999876543 222 245566555544 44444333 5554333
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.++++.||+.-. | ++++...+
T Consensus 82 -------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 153 (293)
T 1f6k_A 82 -------SVNLKEAVELGKYATELGYDCLSAVTPFYYKF-SFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGE 153 (293)
T ss_dssp -------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHH
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHH
Confidence 33567789999999999999998877765433 223334567778888899977532 3 48888888
Q ss_pred HHHcC
Q 017733 310 AVAAN 314 (367)
Q Consensus 310 ~L~~G 314 (367)
+.+..
T Consensus 154 La~~p 158 (293)
T 1f6k_A 154 LYKNP 158 (293)
T ss_dssp HHTST
T ss_pred HhcCC
Confidence 87543
No 316
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.08 E-value=0.081 Score=49.03 Aligned_cols=145 Identities=8% Similarity=0.039 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-+....++|.|||-+.+.-| |+- -|.+.|.+++..+++++. |..+|.+=++
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttG----------------E~~~Lt~~Er~~v~~~~~~~~~---grvpviaGvg----- 79 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTA----------------ESPTLTTDEKELILKTVIDLVD---KRVPVIAGTG----- 79 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGG----------------TGGGSCHHHHHHHHHHHHHHHT---TSSCEEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ccccCCHHHHHHHHHHHHHHhC---CCCcEEEeCC-----
Confidence 444455556679999999877554 222 245666655555544442 2225555333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKAV 311 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~L 311 (367)
..+.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++.
T Consensus 80 -----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 153 (292)
T 3daq_A 80 -----TNDTEKSIQASIQAKALGADAIMLITPYYNKT-NQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILS 153 (292)
T ss_dssp -----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred -----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHh
Confidence 23567799999999999999998877765543 223344567788888899977542 3 4888888877
Q ss_pred HcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 312 AANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 312 ~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
+.. .+|++ .-.-.|.+...++++
T Consensus 154 ~~p--nivgi-K~ssgd~~~~~~~~~ 176 (292)
T 3daq_A 154 QHP--YIVAL-KDATNDFEYLEEVKK 176 (292)
T ss_dssp TST--TEEEE-EECCCCHHHHHHHHT
T ss_pred cCC--CEEEE-EeCCCCHHHHHHHHH
Confidence 543 34544 111124344555554
No 317
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=96.07 E-value=0.099 Score=46.97 Aligned_cols=136 Identities=11% Similarity=0.082 Sum_probs=74.8
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
..+.++.+.+.|+|.||+-.-+ |... ....+.+.+..+|+..+..|+.+-++...+ +
T Consensus 19 ~~~~~~~~~~~~~D~vElRvD~------------------l~~~---~~~~v~~~~~~lr~~~~~~PiI~T~R~~~e--G 75 (238)
T 1sfl_A 19 TLIQKINHRIDAIDVLELRIDQ------------------FENV---TVDQVAEMITKLKVMQDSFKLLVTYRTKLQ--G 75 (238)
T ss_dssp HHHHHHHHTTTTCSEEEEECTT------------------STTC---CHHHHHHHHHHHC---CCSEEEEECCBGGG--T
T ss_pred HHHHHHHhhhcCCCEEEEEecc------------------cccC---CHHHHHHHHHHHHHhccCCCEEEEeecccc--C
Confidence 3455667778899999986543 2211 145678899999998876676665554221 1
Q ss_pred cCCCChHHHHHHHHHHhhhc-CccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe-CCC--CH--HHH----HHH
Q 017733 241 AVDSNPEALGLYMAKALNKF-KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA-GGY--SR--DEG----NKA 310 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~-Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggi--t~--~~a----~~~ 310 (367)
.....+.++..++.+.+.+. ++|||+|-.... ..........+..+ ..+..||++ ..+ || ++. +++
T Consensus 76 G~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~---~~~~~~~~l~~~~~-~~~~kvI~S~Hdf~~tp~~~el~~~~~~~ 151 (238)
T 1sfl_A 76 GYGQFTNDSYLNLISDLANINGIDMIDIEWQAD---IDIEKHQRIITHLQ-QYNKEVIISHHNFESTPPLDELQFIFFKM 151 (238)
T ss_dssp SCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTT---SCHHHHHHHHHHHH-HTTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCC---CChHHHHHHHHHHH-hcCCEEEEEecCCCCCcCHHHHHHHHHHH
Confidence 11133567778888888776 699999853210 00100111122222 234566666 445 44 443 344
Q ss_pred HHcCCCcEEcccHH
Q 017733 311 VAANYTDLVAFGRL 324 (367)
Q Consensus 311 L~~G~~D~V~~gR~ 324 (367)
.+.| ||+|=++..
T Consensus 152 ~~~g-aDivKia~~ 164 (238)
T 1sfl_A 152 QKFN-PEYVKLAVM 164 (238)
T ss_dssp HTTC-CSEEEEEEC
T ss_pred HHcC-CCEEEEEec
Confidence 4456 887766654
No 318
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.06 E-value=0.18 Score=46.39 Aligned_cols=140 Identities=13% Similarity=0.087 Sum_probs=81.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce
Q 017733 149 LSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 149 mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i 228 (367)
++...++++.++ ++.+.+.|+|.||+-..+ +... +....+.+.+..+|+.++..||
T Consensus 46 l~~~~~~e~~~~----~~~~~~~gaD~VElRvD~------------------l~~~--~~~~~v~~~l~~lr~~~~~~Pi 101 (276)
T 3o1n_A 46 LMGKTITDVKSE----ALAYREADFDILEWRVDH------------------FANV--TTAESVLEAAGAIREIITDKPL 101 (276)
T ss_dssp ECCSSHHHHHHH----HHHHTTSCCSEEEEEGGG------------------CTTT--TCHHHHHHHHHHHHHHCCSSCE
T ss_pred eCCCCHHHHHHH----HHHHhhCCCCEEEEEecc------------------cccc--CcHHHHHHHHHHHHHhcCCCCE
Confidence 344444444433 444456899999986543 2210 1235688999999999876676
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcC-ccEEEEecCCccccCCchhhHHHHHHHH---HhcCCcEEEe-CCC-
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFK-LLYLHVIEPRMIQLTDKSETQRSLLSMR---RAFEGTFIAA-GGY- 302 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~G-vd~i~v~~~~~~~~~~~~~~~~~~~~ir---~~~~~pvi~~-Ggi- 302 (367)
.+-++...+. .....+.++..++.+.+.+.| +|||+|-.. . . ....+.+. +.-.+.||++ ..+
T Consensus 102 I~T~Rt~~eG--G~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~-~-----~---~~~~~~l~~~a~~~~~kvI~S~Hdf~ 170 (276)
T 3o1n_A 102 LFTFRSAKEG--GEQALTTGQYIDLNRAAVDSGLVDMIDLELF-T-----G---DDEVKATVGYAHQHNVAVIMSNHDFH 170 (276)
T ss_dssp EEECCBGGGT--CSBCCCHHHHHHHHHHHHHHTCCSEEEEEGG-G-----C---HHHHHHHHHHHHHTTCEEEEEEEESS
T ss_pred EEEEEEhhhC--CCCCCCHHHHHHHHHHHHhcCCCCEEEEECc-C-----C---HHHHHHHHHHHHhCCCEEEEEeecCC
Confidence 6555542211 111234567788888888888 999998422 1 1 12333332 2345677776 445
Q ss_pred -CH--HH----HHHHHHcCCCcEEcccHH
Q 017733 303 -SR--DE----GNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 303 -t~--~~----a~~~L~~G~~D~V~~gR~ 324 (367)
|| ++ .+++.+.| ||+|=++..
T Consensus 171 ~tP~~~el~~~~~~~~~~G-aDIvKia~~ 198 (276)
T 3o1n_A 171 KTPAAEEIVQRLRKMQELG-ADIPKIAVM 198 (276)
T ss_dssp CCCCHHHHHHHHHHHHHTT-CSEEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHcC-CCEEEEEec
Confidence 43 23 34455566 887776544
No 319
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.05 E-value=0.13 Score=47.82 Aligned_cols=129 Identities=17% Similarity=0.173 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++..+++ .++.. +|.+=++
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttG----------------E~~~Ls~~Er~~v~~~~~~----~~~grvpviaGvg---- 93 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTG----------------ESPTTTAAEKLELLKAVRE----EVGDRAKLIAGVG---- 93 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTT----------------TTTTSCHHHHHHHHHHHHH----HHTTTSEEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHHH----HhCCCCcEEecCC----
Confidence 445555566778999999876543 332 255666655555444 44333 5554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...++
T Consensus 94 ------~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 94 ------TNNTRTSVELAEAAASAGADGLLVVTPYYSKP-SQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRL 166 (304)
T ss_dssp ------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 33567799999999999999998877765433 223334566788888899977532 2 488888887
Q ss_pred HHcCCCcEEcc
Q 017733 311 VAANYTDLVAF 321 (367)
Q Consensus 311 L~~G~~D~V~~ 321 (367)
.+.. .+|++
T Consensus 167 a~~p--nIvgi 175 (304)
T 3cpr_A 167 SELP--TILAV 175 (304)
T ss_dssp TTST--TEEEE
T ss_pred HcCC--CEEEE
Confidence 6433 34443
No 320
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=96.05 E-value=0.034 Score=54.43 Aligned_cols=101 Identities=7% Similarity=0.121 Sum_probs=69.4
Q ss_pred HHHHHHHHHHh---CC--c-ceEEEeCCCccccccCC-----CChHHHHHHHH-HHhhhcCccEEEEecCCccccCCchh
Q 017733 213 LEVVEAVVREI---GA--E-RVGMRLSPYAECAEAVD-----SNPEALGLYMA-KALNKFKLLYLHVIEPRMIQLTDKSE 280 (367)
Q Consensus 213 ~eii~aiR~~v---g~--~-~i~vrls~~~~~~~~~~-----~~~~~~~~~l~-~~L~~~Gvd~i~v~~~~~~~~~~~~~ 280 (367)
.+.|++||+++ |+ + .|.|.....+.+....+ ..+.+++..++ +.|++.++.||+ +|. .+.
T Consensus 224 ~~~v~~vreav~~~G~~~~~~L~vDa~as~~~~n~~~~~~n~~~~~~~ai~~~~~~l~~~~i~~iE--eP~------~~~ 295 (427)
T 2pa6_A 224 REALDLLTESVKKAGYEDEVVFALDAAASEFYKDGYYYVEGKKLTREELLDYYKALVDEYPIVSIE--DPF------HEE 295 (427)
T ss_dssp HHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSCEEEEE--CCS------CTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcchhccccCCceeecCCCCCHHHHHHHHHHHHhhCCCcEEE--cCC------Chh
Confidence 67888888888 86 5 46666632221110000 11456777775 578889998887 442 223
Q ss_pred hHHHHHHHHHhcCCcEEEeCC-CC-HHHHHHHHHcCCCcEEcc
Q 017733 281 TQRSLLSMRRAFEGTFIAAGG-YS-RDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 281 ~~~~~~~ir~~~~~pvi~~Gg-it-~~~a~~~L~~G~~D~V~~ 321 (367)
+....+.+++..++||++... ++ ++++.++|+.+.+|+|.+
T Consensus 296 d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 296 DFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp CHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred hHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 456677899889999988777 45 999999999999999876
No 321
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.03 E-value=0.12 Score=47.99 Aligned_cols=124 Identities=17% Similarity=0.142 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCC-c-ceEEEeCCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGA-E-RVGMRLSPY 235 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~-~-~i~vrls~~ 235 (367)
+.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.++ ++.+++.++. . +|.+=++
T Consensus 28 ~~l~~lv~~li~~Gv~gl~v~GttG----------------E~~~Ls~~Er~~v----~~~~~~~~~g~rvpviaGvg-- 85 (301)
T 3m5v_A 28 QSYARLIKRQIENGIDAVVPVGTTG----------------ESATLTHEEHRTC----IEIAVETCKGTKVKVLAGAG-- 85 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEECSSTTT----------------TGGGSCHHHHHHH----HHHHHHHHTTSSCEEEEECC--
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHH----HHHHHHHhCCCCCeEEEeCC--
Confidence 3445555566779999999766543 222 245566554 4455555543 3 5555333
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHH
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGN 308 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~ 308 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...
T Consensus 86 --------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~ 156 (301)
T 3m5v_A 86 --------SNATHEAVGLAKFAKEHGADGILSVAPYYNKP-TQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTII 156 (301)
T ss_dssp --------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHH
T ss_pred --------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHH
Confidence 33567899999999999999998877766533 223344567788899999977542 2 4899888
Q ss_pred HHHHc
Q 017733 309 KAVAA 313 (367)
Q Consensus 309 ~~L~~ 313 (367)
++.+.
T Consensus 157 ~La~~ 161 (301)
T 3m5v_A 157 KLFRD 161 (301)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88776
No 322
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=96.03 E-value=0.11 Score=46.83 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=37.2
Q ss_pred HHHHHHhcC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEcccHHHHhCCch
Q 017733 285 LLSMRRAFE-GTFIAAGGYSRD-----------EGNKAVAANYTDLVAFGRLFLANPDL 331 (367)
Q Consensus 285 ~~~ir~~~~-~pvi~~Ggit~~-----------~a~~~L~~G~~D~V~~gR~~ladP~l 331 (367)
++.+|+..+ .+++..||++++ ...++++.| +|++.+||+.+..+|.
T Consensus 167 i~~lr~~~~~~~i~V~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp 224 (246)
T 2yyu_A 167 AAFIKERCGASFLAVTPGIRFADDAAHDQVRVVTPRKARALG-SDYIVIGRSLTRAADP 224 (246)
T ss_dssp HHHHHHHHCTTSEEEECCCCCCC-------CCCCHHHHHHHT-CSEEEECHHHHTSSSH
T ss_pred HHHHHHhcCCCCEEEeCCcCCCCCCcccccccCCHHHHHHcC-CCEEEECHhhcCCCCH
Confidence 666777764 458888999665 688899999 9999999999987664
No 323
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=96.03 E-value=0.079 Score=52.16 Aligned_cols=125 Identities=12% Similarity=-0.004 Sum_probs=86.0
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
...+..+|.|+|-|.++. | ++ .-+.++++.+++. | -.+.+-++-
T Consensus 123 i~ea~~~GAD~ILLi~a~-------l-------~~----------~~l~~l~~~a~~l-g-m~~LvEvh~---------- 166 (452)
T 1pii_A 123 IYLARYYQADACLLMLSV-------L-------DD----------DQYRQLAAVAHSL-E-MGVLTEVSN---------- 166 (452)
T ss_dssp HHHHHHTTCSEEEEETTT-------C-------CH----------HHHHHHHHHHHHT-T-CEEEEEECS----------
T ss_pred HHHHHHcCCCEEEEEccc-------C-------CH----------HHHHHHHHHHHHc-C-CeEEEEeCC----------
Confidence 334788999999998864 1 11 2367777777773 4 245555543
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.++.. ...++|.++|-+..+++... .........+.+.+ +.++|+-+|| |++++..+.+. +|.|.+
T Consensus 167 --~eE~~----~A~~lga~iIGinnr~L~t~---~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~--a~avLV 235 (452)
T 1pii_A 167 --EEEQE----RAIALGAKVVGINNRDLRDL---SIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF--ANGFLI 235 (452)
T ss_dssp --HHHHH----HHHHTTCSEEEEESEETTTT---EECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT--CSEEEE
T ss_pred --HHHHH----HHHHCCCCEEEEeCCCCCCC---CCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh--CCEEEE
Confidence 33322 23457899999877765432 12345566666666 4579999999 89999999877 999999
Q ss_pred cHHHHhCCchHHHHH
Q 017733 322 GRLFLANPDLPKRFE 336 (367)
Q Consensus 322 gR~~ladP~l~~k~~ 336 (367)
|.+++..++....++
T Consensus 236 Gealmr~~d~~~~~~ 250 (452)
T 1pii_A 236 GSALMAHDDLHAAVR 250 (452)
T ss_dssp CHHHHTCSCHHHHHH
T ss_pred cHHHcCCcCHHHHHH
Confidence 999999988655544
No 324
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.00 E-value=0.67 Score=43.02 Aligned_cols=128 Identities=20% Similarity=0.153 Sum_probs=85.0
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe---CCCccc-
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL---SPYAEC- 238 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl---s~~~~~- 238 (367)
+.+++|.++||.-|-+.+.| -++|...+.+.++++..++. |- .|-.-| ...++.
T Consensus 86 e~~~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed~~ 143 (305)
T 1rvg_A 86 ESVLRALRAGFTSVMIDKSH--------------------EDFETNVRETRRVVEAAHAV-GV-TVEAELGRLAGIEEHV 143 (305)
T ss_dssp HHHHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHT-TC-EEEEEESCCCCSCC--
T ss_pred HHHHHHHHcCCCeeeeCCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-EEEEEEeeccCccCCc
Confidence 44556778999999988765 14788899999999999875 21 122222 222221
Q ss_pred cc---cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCC--ch--hhHHHHHHHHHhcCCcEEEe--C---------
Q 017733 239 AE---AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTD--KS--ETQRSLLSMRRAFEGTFIAA--G--------- 300 (367)
Q Consensus 239 ~~---~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~--~~--~~~~~~~~ir~~~~~pvi~~--G--------- 300 (367)
.. .....+++++.+|++. .|||++-++-++.+..+. .. -..+.++.|++.+++|++.= .
T Consensus 144 ~~~~~~~~yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~ 220 (305)
T 1rvg_A 144 AVDEKDALLTNPEEARIFMER---TGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVER 220 (305)
T ss_dssp ----CCTTCCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHH
T ss_pred cccccccccCCHHHHHHHHHH---HCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHH
Confidence 00 0112456777777754 699999998887655443 22 23467899999999996644 3
Q ss_pred ------------CCCHHHHHHHHHcCC
Q 017733 301 ------------GYSRDEGNKAVAANY 315 (367)
Q Consensus 301 ------------git~~~a~~~L~~G~ 315 (367)
|+..++.+++++.|.
T Consensus 221 ~~~~gg~~~~~~G~p~e~i~~ai~~GV 247 (305)
T 1rvg_A 221 FRASGGEIGEAAGIHPEDIKKAISLGI 247 (305)
T ss_dssp HHHTTCCCCSCBCCCHHHHHHHHHTTE
T ss_pred HHhhccccccCCCCCHHHHHHHHHCCC
Confidence 567888999999993
No 325
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=96.00 E-value=0.076 Score=49.36 Aligned_cols=139 Identities=15% Similarity=0.089 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHh-CCc-ceEEEeCCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREI-GAE-RVGMRLSPY 235 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~v-g~~-~i~vrls~~ 235 (367)
++..+.+++..++|..||.|-...+ .+|....+| .+...-.+ .+-|++.|++. +++ .|.-|.-..
T Consensus 98 ~~v~~~v~~l~~aGaagv~iEDq~~-----------~k~cGh~~gk~l~~~~e~-~~ri~Aa~~A~~~~~~~I~ARTDa~ 165 (298)
T 3eoo_A 98 FNIARTIRSFIKAGVGAVHLEDQVG-----------QKRCGHRPGKECVPAGEM-VDRIKAAVDARTDETFVIMARTDAA 165 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCC-----------CCCTTCCCCCCBCCHHHH-HHHHHHHHHHCSSTTSEEEEEECTH
T ss_pred HHHHHHHHHHHHhCCeEEEECCCCC-----------CcccCCCCCCeecCHHHH-HHHHHHHHHhccCCCeEEEEeehhh
Confidence 3567778888899999999987542 356554444 33333333 34445555554 344 466677542
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe---CCCCH-HHHHHHH
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA---GGYSR-DEGNKAV 311 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L 311 (367)
. ....+++++=++...++|+|.|-+... ...+.++.+.+.+++||++| ++-+| -..+++-
T Consensus 166 ~-------~~gldeai~Ra~ay~~AGAD~if~~~~---------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~ 229 (298)
T 3eoo_A 166 A-------AEGIDAAIERAIAYVEAGADMIFPEAM---------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELK 229 (298)
T ss_dssp H-------HHHHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHH
T ss_pred h-------hcCHHHHHHHHHhhHhcCCCEEEeCCC---------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHH
Confidence 1 124678888899999999998876422 13456778888888998765 33333 2356666
Q ss_pred HcCCCcEEcccHHHH
Q 017733 312 AANYTDLVAFGRLFL 326 (367)
Q Consensus 312 ~~G~~D~V~~gR~~l 326 (367)
+-| +.+|..+-.++
T Consensus 230 ~lG-v~~v~~~~~~~ 243 (298)
T 3eoo_A 230 GAN-VDIALYCCGAY 243 (298)
T ss_dssp HTT-CCEEEECSHHH
T ss_pred HcC-CeEEEEchHHH
Confidence 678 89998875544
No 326
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=95.98 E-value=0.52 Score=43.83 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=86.1
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE---eCCCcccc
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR---LSPYAECA 239 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr---ls~~~~~~ 239 (367)
+.+++|.++||+-|-|.+.|- ++|...+.+.++++..++. | -.|-.- +...++..
T Consensus 88 e~~~~ai~~GFtSVMiDgS~~--------------------p~eeNi~~Tk~vv~~ah~~-g-vsVEaELG~igG~Ed~~ 145 (307)
T 3n9r_A 88 ESCEKAVKAGFTSVMIDASHH--------------------AFEENLELTSKVVKMAHNA-G-VSVEAELGRLMGIEDNI 145 (307)
T ss_dssp HHHHHHHHHTCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHT-T-CEEEEEESCCCCC----
T ss_pred HHHHHHHHhCCCcEEEECCCC--------------------CHHHHHHHHHHHHHHHHHc-C-CeEEEEeeeeccccCCc
Confidence 344566789999999887661 5677899999999999875 1 112222 22222211
Q ss_pred cc----CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCC----chhhHHHHHHHHHhcCCcEEEeC-----------
Q 017733 240 EA----VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTD----KSETQRSLLSMRRAFEGTFIAAG----------- 300 (367)
Q Consensus 240 ~~----~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~----~~~~~~~~~~ir~~~~~pvi~~G----------- 300 (367)
.. ....+++++.+|++ +.|+|+|-++-++.+..+. ..-..+.++.|++..++|++.=|
T Consensus 146 ~~~~~~~~yT~Peea~~Fv~---~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~ 222 (307)
T 3n9r_A 146 SVDEKDAVLVNPKEAEQFVK---ESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLVLHGASAIPDNVRKS 222 (307)
T ss_dssp ------CCSCCHHHHHHHHH---HHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHH
T ss_pred ccccccccCCCHHHHHHHHH---HHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHH
Confidence 00 11235677777765 4799999998887655443 11244668888887788976554
Q ss_pred ------------CCCHHHHHHHHHcCCCcEEcccH
Q 017733 301 ------------GYSRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 301 ------------git~~~a~~~L~~G~~D~V~~gR 323 (367)
|+..++.+++++.|.+ =|=+..
T Consensus 223 ~~~~gg~~~~~~G~p~e~i~~ai~~GV~-KiNi~T 256 (307)
T 3n9r_A 223 YLDAGGDLKGSKGVPFEFLQESVKGGIN-KVNTDT 256 (307)
T ss_dssp HHHTTCCCTTCBCCCHHHHHHHHHTTEE-EEEECH
T ss_pred HHHhcCccCCCCCCCHHHHHHHHHcCce-EEEech
Confidence 6678999999999943 343433
No 327
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.97 E-value=0.19 Score=44.81 Aligned_cols=120 Identities=14% Similarity=0.165 Sum_probs=71.6
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce-EEEeCCCccccccCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV-GMRLSPYAECAEAVD 243 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i-~vrls~~~~~~~~~~ 243 (367)
+..+.+.+.|.|+||+.. ..+.++.+|+..+-..+ .+|+....
T Consensus 85 ~~~i~~~~ld~vQLHG~E-----------------------------~~~~~~~l~~~~~~~viKa~~v~~~~------- 128 (228)
T 4aaj_A 85 AMAIERTGAQYIQVHSNA-----------------------------LPQTIDTLKKEFGVFVMKAFRVPTIS------- 128 (228)
T ss_dssp HHHHHHHTCSEEEECSCC-----------------------------CHHHHHHHHHHHCCEEEEEEECCSSC-------
T ss_pred HHHHHhccchheeccccc-----------------------------CHHHHHHHhhccCceEEEEEEecccc-------
Confidence 334567899999998643 14567788888764322 45654321
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccH
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR 323 (367)
..+.++...+...+....+|++-+..+.- .+...++..++.+.. +.|++..||++|+...++|+.-....|=+..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~d~~LlDs~GG---tG~~fDW~~~~~~~~--~~p~iLAGGL~peNV~~Ai~~~~P~gVDVsS 203 (228)
T 4aaj_A 129 KNPEEDANRLLSEISRYNADMVLLDTGAG---SGKLHDLRVSSLVAR--KIPVIVAGGLNAENVEEVIKVVKPYGVDVSS 203 (228)
T ss_dssp SCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH--HSCEEEESSCCTTTHHHHHHHHCCSEEEESG
T ss_pred cchhhhHHHHHHHHhccCCCEEccCCCCC---CcCcCChHHHHHhhh--cCCeEEECCCCHHHHHHHHHHhCCCEEEeCC
Confidence 22344555556666666788876643211 112233455555544 3689999999999888888753355665555
Q ss_pred HH
Q 017733 324 LF 325 (367)
Q Consensus 324 ~~ 325 (367)
++
T Consensus 204 GV 205 (228)
T 4aaj_A 204 GV 205 (228)
T ss_dssp GG
T ss_pred CC
Confidence 54
No 328
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.87 E-value=0.023 Score=50.96 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=63.0
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHH
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
.+++..+++.|.+.|+..|++...+ +...+.++.+++.++..+++.|.+ |.++++.+++.| +|||...-
T Consensus 45 ~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AG-A~fIvsP~-- 114 (232)
T 4e38_A 45 AEDIIPLGKVLAENGLPAAEITFRS-------DAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAG-ATFVVSPG-- 114 (232)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHT-CSEEECSS--
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCC-------CCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcC-CCEEEeCC--
Confidence 3567889999999999999986432 224567888999887778888877 999999999999 99998753
Q ss_pred HhCCchHHHHHh
Q 017733 326 LANPDLPKRFEL 337 (367)
Q Consensus 326 ladP~l~~k~~~ 337 (367)
.||++.+..++
T Consensus 115 -~~~~vi~~~~~ 125 (232)
T 4e38_A 115 -FNPNTVRACQE 125 (232)
T ss_dssp -CCHHHHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 57777766554
No 329
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.85 E-value=0.06 Score=50.15 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..++++ ++.. +|.+=++.
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~GttG----------------E~~~Ls~~Er~~v~~~~~~~----~~grvpviaGvg~--- 82 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPLGSTG----------------EFAYLGTAQREAVVRATIEA----AQRRVPVVAGVAS--- 82 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTTSGGG----------------TGGGCCHHHHHHHHHHHHHH----HTTSSCBEEEEEE---
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------CccccCHHHHHHHHHHHHHH----hCCCCcEEEeCCC---
Confidence 344445556679999998765443 222 2556666555555544 4333 55543332
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 83 -------~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 154 (300)
T 3eb2_A 83 -------TSVADAVAQAKLYEKLGADGILAILEAYFPL-KDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARL 154 (300)
T ss_dssp -------SSHHHHHHHHHHHHHHTCSEEEEEECCSSCC-CHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHH
Confidence 3467789999999999999998877766543 223344567788899999976543 2 478888777
Q ss_pred HH
Q 017733 311 VA 312 (367)
Q Consensus 311 L~ 312 (367)
.+
T Consensus 155 a~ 156 (300)
T 3eb2_A 155 AE 156 (300)
T ss_dssp HT
T ss_pred Hc
Confidence 53
No 330
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=95.80 E-value=1.3 Score=42.74 Aligned_cols=170 Identities=11% Similarity=0.104 Sum_probs=94.0
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCC-ccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAG-RVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAA 165 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~G-r~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA 165 (367)
++.+.++++.++++|-++++.+ |.+ ..+.+.- ...|.+ + ..++.+++.+-+.+|...+
T Consensus 88 ~~~~~~~a~~Ak~~GLkVlldf-HysD~WadPg~------Q~~P~a-----------W---~~~~~~~l~~~~~~yt~~~ 146 (399)
T 1ur4_A 88 LEKAIQIGKRATANGMKLLADF-HYSDFWADPAK------QKAPKA-----------W---ANLNFEDKKTALYQYTKQS 146 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE-CSSSSCCSSSC------CCCCGG-----------G---TTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-ccCCccCCccc------ccCccc-----------c---ccCCHHHHHHHHHHHHHHH
Confidence 5688889999999999999987 532 1111110 011111 1 1256677776666666555
Q ss_pred -HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC--CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 166 -RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG--GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 166 -~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG--gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
.++++.|.+.--+..++- -+-.++ ...++..+|+.+.+++||++.+.-.|.+=+.. +
T Consensus 147 l~~l~~~g~~~~~vqvGNE-------------i~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~-------~ 206 (399)
T 1ur4_A 147 LKAMKAAGIDIGMVQVGNE-------------TNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTN-------P 206 (399)
T ss_dssp HHHHHHTTCCEEEEEESSS-------------CSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECC-------T
T ss_pred HHHHHhcCCCCcEEEEccc-------------cccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC-------C
Confidence 444566754333334442 111111 24678889999999999999754345553322 0
Q ss_pred CCChHHHHHHHHHHhhhcC--ccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC
Q 017733 243 DSNPEALGLYMAKALNKFK--LLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG 300 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~G--vd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 300 (367)
.. .+....+...|...| +|.|.++--.+.. .........++.+.++...||+.+.
T Consensus 207 ~~--~~~~~~~~d~l~~~g~d~DvIG~syYp~W~-~~l~~l~~~l~~l~~rygKpV~v~E 263 (399)
T 1ur4_A 207 ET--SGRYAWIAETLHRHHVDYDVFASSYYPFWH-GTLKNLTSVLTSVADTYGKKVMVAE 263 (399)
T ss_dssp TS--TTHHHHHHHHHHHTTCCCSEEEEEECTTTS-CCHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred cc--hHHHHHHHHHHHHcCCCcCeEeEecCccch-hhHHHHHHHHHHHHHHhCCcEEEEE
Confidence 11 123344556666666 5666665211111 1111223446677777889977653
No 331
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.80 E-value=0.1 Score=48.37 Aligned_cols=123 Identities=16% Similarity=0.115 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~v~~~~~----~~~~gr~pvi~Gvg---- 78 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTG----------------EATTMTETERKETIKFVI----DKVNKRIPVIAGTG---- 78 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGG----------------TGGGSCHHHHHHHHHHHH----HHHTTSSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHHHHHHHH----HHhCCCCcEEEeCC----
Confidence 455555666779999999876543 222 24556665554444 444333 5554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. | ++++...++
T Consensus 79 ------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (291)
T 3a5f_A 79 ------SNNTAASIAMSKWAESIGVDGLLVITPYYNKT-TQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKEL 151 (291)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 23567789999999999999998877765432 222233455667778888977532 2 488888887
Q ss_pred HHc
Q 017733 311 VAA 313 (367)
Q Consensus 311 L~~ 313 (367)
.+.
T Consensus 152 a~~ 154 (291)
T 3a5f_A 152 CED 154 (291)
T ss_dssp TTS
T ss_pred HcC
Confidence 643
No 332
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.78 E-value=0.13 Score=46.80 Aligned_cols=130 Identities=12% Similarity=0.091 Sum_probs=76.7
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh--C---CcceEE-EeCCCc-
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI--G---AERVGM-RLSPYA- 236 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v--g---~~~i~v-rls~~~- 236 (367)
+++.+.++|+|.|-+|+..| ...+...+++.++.. | +..++| .++...
T Consensus 75 a~~~~~~~gad~vTVh~~~G-------------------------~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~ 129 (259)
T 3tfx_A 75 GAKALAKLGITFTTVHALGG-------------------------SQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISD 129 (259)
T ss_dssp HHHHHHTTTCSEEEEEGGGC-------------------------HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCH
T ss_pred HHHHHHhcCCCEEEEcCCCC-------------------------HHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCH
Confidence 44455678999999998654 122333444444321 2 123444 343321
Q ss_pred -cc-cccCC-CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHH-------
Q 017733 237 -EC-AEAVD-SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRD------- 305 (367)
Q Consensus 237 -~~-~~~~~-~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~------- 305 (367)
++ .+.+. ....+....+++...++|+|-+-.+ + .-++.||+.++. -++.+.||.+.
T Consensus 130 ~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s----------~---~e~~~ir~~~~~~f~~vtPGIr~~g~~~gDQ 196 (259)
T 3tfx_A 130 DVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICS----------P---LEVKKLHENIGDDFLYVTPGIRPAGNAKDDQ 196 (259)
T ss_dssp HHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECC----------G---GGHHHHHHHHCSSSEEEECCCCCC-------
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEEC----------H---HHHHHHHhhcCCccEEEcCCcCCCCCCcCCc
Confidence 22 11111 2233456678887788898865432 1 125667777753 36677777432
Q ss_pred ----HHHHHHHcCCCcEEcccHHHHhCCchH
Q 017733 306 ----EGNKAVAANYTDLVAFGRLFLANPDLP 332 (367)
Q Consensus 306 ----~a~~~L~~G~~D~V~~gR~~ladP~l~ 332 (367)
...++++.| +|++.+||+.+..+|-.
T Consensus 197 ~Rv~T~~~a~~aG-ad~iVvGr~I~~a~dp~ 226 (259)
T 3tfx_A 197 SRVATPKMAKEWG-SSAIVVGRPITLASDPK 226 (259)
T ss_dssp ----CHHHHHHTT-CSEEEECHHHHTSSSHH
T ss_pred cccCCHHHHHHcC-CCEEEEChHHhCCCCHH
Confidence 166889999 99999999999876543
No 333
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=95.77 E-value=0.2 Score=46.37 Aligned_cols=124 Identities=11% Similarity=0.047 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+ +++.+++.++.. +|.+=.+.
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~~Er~~----v~~~~~~~~~gr~pviaGvg~--- 81 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTG----------------EGCSVGSRERQA----ILSSFIAAGIAPSRIVTGVLV--- 81 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTT----------------TGGGSCHHHHHH----HHHHHHHTTCCGGGEEEEECC---
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHHH----HHHHHHHHhCCCCcEEEeCCC---
Confidence 445555566778999999876543 222 24555554 455555555433 55553333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhc---CCcEEEeC-----C--CCHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAF---EGTFIAAG-----G--YSRDE 306 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~---~~pvi~~G-----g--it~~~ 306 (367)
++.++++++++..++.|+|.+-+..+.+.. + +......+.+.|.+++ ++||+.-. | ++++.
T Consensus 82 -------~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~ 153 (294)
T 3b4u_A 82 -------DSIEDAADQSAEALNAGARNILLAPPSYFKNV-SDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVEL 153 (294)
T ss_dssp -------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSC-CHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHH
T ss_pred -------ccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHH
Confidence 346778999999999999999887776544 2 2233445677888888 89977532 3 48888
Q ss_pred HHHHH-HcC
Q 017733 307 GNKAV-AAN 314 (367)
Q Consensus 307 a~~~L-~~G 314 (367)
..++. +..
T Consensus 154 ~~~La~~~p 162 (294)
T 3b4u_A 154 VGRLKAAFP 162 (294)
T ss_dssp HHHHHHHCT
T ss_pred HHHHHHhCC
Confidence 88887 543
No 334
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=95.72 E-value=0.43 Score=43.25 Aligned_cols=132 Identities=8% Similarity=0.002 Sum_probs=77.5
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
..+..+.+.|+|.||+-..+ |.. . .....+.+.+..+|+.++..|+.+-++...+ +..
T Consensus 36 ~~~~~~~~~~~D~vElRvD~------------------l~~-~-~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~e--GG~ 93 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADF------------------FRA-I-DDQERVLATANGLRNIAGEIPILFTIRSERE--GGQ 93 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGG------------------CTT-T-TCHHHHHHHHHHHHHHSSSCCEEEECCCTTT--TCC
T ss_pred HHHHHHhhcCCCEEEEEeec------------------ccc-c-CcHHHHHHHHHHHHHhccCCCEEEEEeeccc--CCC
Confidence 44556677899999986643 111 0 0135678899999999875566655554221 111
Q ss_pred C-CChHHHHHHHHHHhhhcC-ccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe-CCC--CH--HHH----HHHH
Q 017733 243 D-SNPEALGLYMAKALNKFK-LLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA-GGY--SR--DEG----NKAV 311 (367)
Q Consensus 243 ~-~~~~~~~~~l~~~L~~~G-vd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggi--t~--~~a----~~~L 311 (367)
. ..+.++..++.+.+.+.| +|||++-.. . .. ......+.. ...+..||++ ..+ || ++. .++.
T Consensus 94 ~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~-~----~~-~~~~l~~~~-~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~ 166 (257)
T 2yr1_A 94 PIPLNEAEVRRLIEAICRSGAIDLVDYELA-Y----GE-RIADVRRMT-EECSVWLVVSRHYFDGTPRKETLLADMRQAE 166 (257)
T ss_dssp CCSSCHHHHHHHHHHHHHHTCCSEEEEEGG-G----TT-HHHHHHHHH-HHTTCEEEEEEEESSCCCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCEEEEECC-C----Ch-hHHHHHHHH-HhCCCEEEEEecCCCCCcCHHHHHHHHHHHH
Confidence 2 335677888888888888 999998422 1 11 111222222 2335566666 445 44 443 4455
Q ss_pred HcCCCcEEcccHH
Q 017733 312 AANYTDLVAFGRL 324 (367)
Q Consensus 312 ~~G~~D~V~~gR~ 324 (367)
+.| ||+|=++..
T Consensus 167 ~~g-aDivKia~~ 178 (257)
T 2yr1_A 167 RYG-ADIAKVAVM 178 (257)
T ss_dssp HTT-CSEEEEEEC
T ss_pred hcC-CCEEEEEec
Confidence 566 888776654
No 335
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.71 E-value=0.16 Score=47.44 Aligned_cols=123 Identities=12% Similarity=0.035 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|.+++..+ ++.++.. +|.+=++
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~~Er~~v~~~~----~~~~~grvpviaGvg---- 85 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFS----------------EQFAITDDERDVLTRTI----LEHVAGRVPVIVTTS---- 85 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGG----------------TGGGSCHHHHHHHHHHH----HHHHTTSSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------CcccCCHHHHHHHHHHH----HHHhCCCCcEEEecC----
Confidence 445555566789999999877554 222 2456666555444 4444333 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcc--ccCCchhhHHHHHHHHHhcCCcEEEeC----C--CCHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMI--QLTDKSETQRSLLSMRRAFEGTFIAAG----G--YSRDEGNK 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~--~~~~~~~~~~~~~~ir~~~~~pvi~~G----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+. ...+......+.+.|.+++++||+.-. | ++++...+
T Consensus 86 ------~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~ 159 (309)
T 3fkr_A 86 ------HYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLAR 159 (309)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHH
T ss_pred ------CchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHH
Confidence 235677899999999999999988766552 112233344567788888899976532 3 48888888
Q ss_pred HHH
Q 017733 310 AVA 312 (367)
Q Consensus 310 ~L~ 312 (367)
+.+
T Consensus 160 La~ 162 (309)
T 3fkr_A 160 MAR 162 (309)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 336
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=95.71 E-value=0.26 Score=47.80 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=83.7
Q ss_pred HHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHH--HHHHHHHHHHHhC---CcceEEEeCCC--
Q 017733 163 LAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRF--ALEVVEAVVREIG---AERVGMRLSPY-- 235 (367)
Q Consensus 163 ~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~--~~eii~aiR~~vg---~~~i~vrls~~-- 235 (367)
+..+.+.++||.-|-|.+.|. +. .|. -.++..... +.++++..++.+. ...|+.=....
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~--------~~----~~~--~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~ 173 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMS--------CA----GDP--IPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVP 173 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSC--------CB----TCC--SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSC
T ss_pred HHHHHHHHhCCCEEEECCCCC--------CC----CCC--CCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecC
Confidence 444555667777777776652 00 000 113433433 5777777777621 11233222211
Q ss_pred --ccc-cccC--CCChHHHHHHHHH----HhhhcCccE-------EEEecCCccccCCc-hhhHHHHHHHHHhcCCc-EE
Q 017733 236 --AEC-AEAV--DSNPEALGLYMAK----ALNKFKLLY-------LHVIEPRMIQLTDK-SETQRSLLSMRRAFEGT-FI 297 (367)
Q Consensus 236 --~~~-~~~~--~~~~~~~~~~l~~----~L~~~Gvd~-------i~v~~~~~~~~~~~-~~~~~~~~~ir~~~~~p-vi 297 (367)
++. .+.. ...+++++..+++ .|.+.|+|. +.+.-++....+.. ..+.+.++.|++.+++| ++
T Consensus 174 v~~~~~~~~~~~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~P~LV 253 (420)
T 2fiq_A 174 VPGGEASAIQSVHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMV 253 (420)
T ss_dssp C----------CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTTSSCE
T ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCCCCEE
Confidence 010 0011 1345788888887 677899999 77766664433321 12345688899999889 66
Q ss_pred E--eC--CCCHHHHHHHHHcCCCcEEcccHHH
Q 017733 298 A--AG--GYSRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 298 ~--~G--git~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
. =| +++.++..++++.| +--|=++..+
T Consensus 254 le~HGgSg~~~e~l~~~v~~G-i~kiNV~t~l 284 (420)
T 2fiq_A 254 YEAHSTDYQTRTAYWELVRDH-FAILKVGPAL 284 (420)
T ss_dssp EEESCCTTCCHHHHHHHHHTT-EEEEEECHHH
T ss_pred EecCCCCCCCHHHHHHHHHcC-CCEEEECHHH
Confidence 5 22 34788899999998 5566655544
No 337
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.70 E-value=0.094 Score=49.14 Aligned_cols=122 Identities=11% Similarity=0.091 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++.. +++.++.. +|.+=++
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~eEr~~vi~~----~~~~~~grvpViaGvg---- 89 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGNTG----------------EFYALTIEEAKQVATR----VTELVNGRATVVAGIG---- 89 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSGGG----------------TGGGSCHHHHHHHHHH----HHHHHTTSSEEEEEEC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccC----------------ChhhCCHHHHHHHHHH----HHHHhCCCCeEEecCC----
Confidence 445555566779999998765443 222 245666555444 44444333 5554222
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe---CCCCHHHHHHHHHc
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA---GGYSRDEGNKAVAA 313 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~~~a~~~L~~ 313 (367)
. +.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.- |-++++...++.+.
T Consensus 90 ------~-st~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~~ 160 (314)
T 3d0c_A 90 ------Y-SVDTAIELGKSAIDSGADCVMIHQPVHPYI-TDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAPL 160 (314)
T ss_dssp ------S-SHHHHHHHHHHHHHTTCSEEEECCCCCSCC-CHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTTC
T ss_pred ------c-CHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHcC
Confidence 3 467789999999999999998877765433 22333456678888999997763 22577877777643
No 338
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=95.70 E-value=0.1 Score=48.90 Aligned_cols=126 Identities=15% Similarity=0.115 Sum_probs=82.9
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe---CCCccc-cc
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL---SPYAEC-AE 240 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl---s~~~~~-~~ 240 (367)
+++|.++||+-|-|.+.| -++|...+.+.++++..++. |- .|-.-| ...++. ..
T Consensus 91 i~~ai~~GFtSVMiDgS~--------------------~p~eENi~~Tk~vv~~ah~~-gv-sVEaELG~vgg~Ed~v~~ 148 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDASH--------------------HPFDENVRITKEVVAYAHAR-SV-SVEAELGTLGGIEEDVQN 148 (323)
T ss_dssp HHHHHHTTCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHTT-TC-EEEEEESCC---------
T ss_pred HHHHHHcCCCeEEecCCC--------------------CCHHHHHHHHHHHHHHHHHc-CC-eEEEEeCCccCCccCccc
Confidence 556778899999888765 14677889999999988865 21 222222 121211 00
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCC--chhh----HHHHHHHHHhcCCcEEEeC--------------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTD--KSET----QRSLLSMRRAFEGTFIAAG-------------- 300 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~--~~~~----~~~~~~ir~~~~~pvi~~G-------------- 300 (367)
.....+++++.+|++ +.|||.+-++-++.+..+. ..+. .+.++.|++.+++|++.=|
T Consensus 149 ~~~yTdPeea~~Fv~---~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 149 TVQLTEPQDAKKFVE---LTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp -CCCCCHHHHHHHHH---HHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH---HHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHH
Confidence 111245677777765 4699999998887655443 2222 4678999999999977666
Q ss_pred ---------CCCHHHHHHHHHcCC
Q 017733 301 ---------GYSRDEGNKAVAANY 315 (367)
Q Consensus 301 ---------git~~~a~~~L~~G~ 315 (367)
|+..++..++++.|.
T Consensus 226 ~gg~~~~~~Gvp~e~i~~ai~~GV 249 (323)
T 2isw_A 226 YGGKMPDAVGVPIESIVHAIGEGV 249 (323)
T ss_dssp TTCCCTTCBCCCHHHHHHHHHTTE
T ss_pred hccccccCCCCCHHHHHHHHHCCC
Confidence 778899999999994
No 339
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.68 E-value=0.26 Score=43.62 Aligned_cols=116 Identities=15% Similarity=0.162 Sum_probs=69.8
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce-EEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV-GMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i-~vrls~~~~~~~ 240 (367)
.+.|+.+.++|+++|.+.. .+.+++||+.++ .++ ++-.. ++.+
T Consensus 39 ~~~a~~~~~~G~~~i~~~~--------------------------------~~~i~~i~~~~~-~p~i~~~~~---~~~~ 82 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANS--------------------------------VRDIKEIQAITD-LPIIGIIKK---DYPP 82 (234)
T ss_dssp HHHHHHHHHHTCSEEEEES--------------------------------HHHHHHHHTTCC-SCEEEECBC---CCTT
T ss_pred HHHHHHHHHCCCcEeecCC--------------------------------HHHHHHHHHhCC-CCEEeeEcC---CCCc
Confidence 5667777789999998630 356888888874 344 32111 1111
Q ss_pred --cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcE
Q 017733 241 --AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 241 --~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~ 318 (367)
.....+.+ .++.+.+.|+|+++++......+. .....+.++.+++.++...++.+-.|++++..+++.| +|+
T Consensus 83 ~~~~i~~~~~----~i~~~~~~Gad~V~l~~~~~~~~~-~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a~~~G-ad~ 156 (234)
T 1yxy_A 83 QEPFITATMT----EVDQLAALNIAVIAMDCTKRDRHD-GLDIASFIRQVKEKYPNQLLMADISTFDEGLVAHQAG-IDF 156 (234)
T ss_dssp SCCCBSCSHH----HHHHHHTTTCSEEEEECCSSCCTT-CCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHHHHTT-CSE
T ss_pred cccccCChHH----HHHHHHHcCCCEEEEcccccCCCC-CccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHHHHcC-CCE
Confidence 00112233 345567889999998754322111 0123467888888874333333334899999999998 999
Q ss_pred E
Q 017733 319 V 319 (367)
Q Consensus 319 V 319 (367)
|
T Consensus 157 i 157 (234)
T 1yxy_A 157 V 157 (234)
T ss_dssp E
T ss_pred E
Confidence 9
No 340
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=95.63 E-value=0.12 Score=46.42 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=75.7
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh--CCc-c--eEEEeCCCc---
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI--GAE-R--VGMRLSPYA--- 236 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v--g~~-~--i~vrls~~~--- 236 (367)
++.+.++|+|.|-+|+-.| ...+.+.++.+|+.. |.. + ++|-+....
T Consensus 74 ~~~~~~~Gad~vtvH~~~g-------------------------~~~l~~~~~~~~~~~~~g~~~~~~~~V~~~ts~~~~ 128 (239)
T 1dbt_A 74 MKRLASLGVDLVNVHAAGG-------------------------KKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQ 128 (239)
T ss_dssp HHHHHTTTCSEEEEEGGGC-------------------------HHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHH
T ss_pred HHHHHhcCCCEEEEeCcCC-------------------------HHHHHHHHHHHHhhhccCCCCccEEEEEEcCCCCHH
Confidence 4445679999999997543 112346677777762 432 2 555443221
Q ss_pred cc-ccc-CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCCCHHHH------
Q 017733 237 EC-AEA-VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGYSRDEG------ 307 (367)
Q Consensus 237 ~~-~~~-~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a------ 307 (367)
.+ ... ......+....++..-.+.|.+-+-.+ . .-++.+|+..+ .+++..||++++.+
T Consensus 129 ~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~----------~---~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~ 195 (239)
T 1dbt_A 129 IMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCS----------V---HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQV 195 (239)
T ss_dssp HHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECC----------G---GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCS
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEEC----------H---HHHHHHHHhcCCCcEEEeCCcCCCCCCcccee
Confidence 12 111 101123333333333355666643211 1 12455666664 56889999976666
Q ss_pred -----HHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 308 -----NKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 308 -----~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
.++++.| +|++.+||+.+..||...
T Consensus 196 rv~tp~~a~~aG-ad~iVvGr~I~~a~dp~~ 225 (239)
T 1dbt_A 196 RVATPAIAREKG-SSAIVVGRSITKAEDPVK 225 (239)
T ss_dssp SCBCHHHHHHTT-CSEEEECHHHHTSSCHHH
T ss_pred ccCCHHHHHHcC-CCEEEEChhhcCCCCHHH
Confidence 7888998 999999999998776433
No 341
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.56 E-value=0.13 Score=48.27 Aligned_cols=128 Identities=12% Similarity=0.046 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....++|.|||-+.+.-| |+- -|.+.|.+++..++ +.++.. +|.+=++
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~eEr~~v~~~~v----~~~~grvpViaGvg---- 89 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGNTS----------------EFYALSLEEAKEEVRRTV----EYVHGRALVVAGIG---- 89 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSGGG----------------TGGGSCHHHHHHHHHHHH----HHHTTSSEEEEEEC----
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------CcccCCHHHHHHHHHHHH----HHhCCCCcEEEEeC----
Confidence 444555556679999999766543 222 24566665554444 444333 5444222
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-C--CCHHHHHHHHHcC
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-G--YSRDEGNKAVAAN 314 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-g--it~~~a~~~L~~G 314 (367)
. +.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...++.+..
T Consensus 90 ------~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~p 161 (316)
T 3e96_A 90 ------Y-ATSTAIELGNAAKAAGADAVMIHMPIHPYV-TAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPLQ 161 (316)
T ss_dssp ------S-SHHHHHHHHHHHHHHTCSEEEECCCCCSCC-CHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTCT
T ss_pred ------c-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcCC
Confidence 2 467789999999999999998876655322 233344567788888899977653 3 4888888776443
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
.+|++
T Consensus 162 --nIvgi 166 (316)
T 3e96_A 162 --NLVGV 166 (316)
T ss_dssp --TEEEE
T ss_pred --CEEEE
Confidence 34444
No 342
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=95.55 E-value=0.056 Score=49.57 Aligned_cols=134 Identities=14% Similarity=0.083 Sum_probs=75.4
Q ss_pred HHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchh-hHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 166 RNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLE-NRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~e-nr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
+.++++||.|| +|-. .|.+-.+|- -.|| +++. ..+.++.||++-..+.+.+ ++
T Consensus 115 e~lk~~Gf~Gv-~N~ptvglidG~fr------------~~LEE~gm~-~~~eve~I~~A~~~gL~Ti---~~-------- 169 (286)
T 2p10_A 115 RELKEIGFAGV-QNFPTVGLIDGLFR------------QNLEETGMS-YAQEVEMIAEAHKLDLLTT---PY-------- 169 (286)
T ss_dssp HHHHHHTCCEE-EECSCGGGCCHHHH------------HHHHHTTCC-HHHHHHHHHHHHHTTCEEC---CE--------
T ss_pred HHHHHhCCceE-EECCCcccccchhh------------hhHhhcCCC-HHHHHHHHHHHHHCCCeEE---Ee--------
Confidence 56789999999 5643 444434442 1122 2232 2345566666653332221 10
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCc-cc---cC---Cchh----hHHHHHHHHHhcC-CcEEEeC-CC-CHHHHHH
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRM-IQ---LT---DKSE----TQRSLLSMRRAFE-GTFIAAG-GY-SRDEGNK 309 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~-~~---~~---~~~~----~~~~~~~ir~~~~-~pvi~~G-gi-t~~~a~~ 309 (367)
-.+++++.. +.++|.|+|.++.+.- .. .. +... .....+.+++.-+ +.|++.| +| +++|+..
T Consensus 170 v~~~eeA~a----mA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~ 245 (286)
T 2p10_A 170 VFSPEDAVA----MAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARF 245 (286)
T ss_dssp ECSHHHHHH----HHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHH
T ss_pred cCCHHHHHH----HHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHH
Confidence 113455444 4568999998876621 10 01 1111 1122334444433 4455555 78 8999999
Q ss_pred HHHc--CCCcEEcccHHHHhCC
Q 017733 310 AVAA--NYTDLVAFGRLFLANP 329 (367)
Q Consensus 310 ~L~~--G~~D~V~~gR~~ladP 329 (367)
+++. | +|.+..+.++..=|
T Consensus 246 ~l~~t~G-~~G~~gASsier~p 266 (286)
T 2p10_A 246 ILDSCQG-CHGFYGASSMERLP 266 (286)
T ss_dssp HHHHCTT-CCEEEESHHHHHHH
T ss_pred HHhcCCC-ccEEEeehhhhcCC
Confidence 9998 6 99999999998877
No 343
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.54 E-value=0.12 Score=46.54 Aligned_cols=48 Identities=17% Similarity=0.286 Sum_probs=38.7
Q ss_pred HHHHHHhcC-CcEEEeCCCCHH-----------HHHHHHHcCCCcEEcccHHHHhCCchHH
Q 017733 285 LLSMRRAFE-GTFIAAGGYSRD-----------EGNKAVAANYTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 285 ~~~ir~~~~-~pvi~~Ggit~~-----------~a~~~L~~G~~D~V~~gR~~ladP~l~~ 333 (367)
++.+|+..+ .++...||++++ ...++++.| +|++.+||+.+..+|...
T Consensus 173 i~~lr~~~~~~~i~v~gGI~~~g~~~~dq~rv~t~~~a~~aG-ad~iVvGr~I~~a~dp~~ 232 (245)
T 1eix_A 173 AVRFKQVFGQEFKLVTPGIRPQGSEAGDQRRIMTPEQALSAG-VDYMVIGRPVTQSVDPAQ 232 (245)
T ss_dssp HHHHHHHHCSSSEEEECCBCCTTCCCTTCCSCBCHHHHHHTT-CSEEEECHHHHTSSSHHH
T ss_pred HHHHHHhcCCCCEEEECCcCCCCCCccchhccCCHHHHHHcC-CCEEEECHHHcCCCCHHH
Confidence 556777664 578999999777 688999999 999999999998776433
No 344
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=95.51 E-value=0.23 Score=45.81 Aligned_cols=137 Identities=8% Similarity=0.008 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh-CCc-ceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI-GAE-RVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v-g~~-~i~vrls~~~ 236 (367)
++..+.+++..++|.+||.|-.+. ..||+....|.+.. ..-..+.|++++++- +++ .|.-|... .
T Consensus 97 ~~~~~~v~~l~~aGa~gv~iED~~-----------~pKrcgh~~gkl~~-~~e~~~~I~aa~~a~~~~~~~i~aRtda-a 163 (287)
T 3b8i_A 97 LNVMRTVVELERAGIAALTIEDTL-----------LPAQFGRKSTDLIC-VEEGVGKIRAALEARVDPALTIIARTNA-E 163 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBC-----------CSCCTTTCTTCBCC-HHHHHHHHHHHHHHCCSTTSEEEEEEET-T
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCC-----------CccccCCCCCCccC-HHHHHHHHHHHHHcCCCCCcEEEEechh-h
Confidence 456778888888999999998764 24555444454332 223455566666654 222 34445532 1
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe-CCCCH-HHHHHHHHcC
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA-GGYSR-DEGNKAVAAN 314 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~-Ggit~-~~a~~~L~~G 314 (367)
....+++++=++.++++|+|.|-+... +..+.++.+.+.+++|++.. ++-++ -..+++-+.|
T Consensus 164 -------~~gl~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~eL~~lG 227 (287)
T 3b8i_A 164 -------LIDVDAVIQRTLAYQEAGADGICLVGV---------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDARLARLG 227 (287)
T ss_dssp -------TSCHHHHHHHHHHHHHTTCSEEEEECC---------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHHHHHHTT
T ss_pred -------hcCHHHHHHHHHHHHHcCCCEEEecCC---------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHHHHHHcC
Confidence 123678888899999999998876421 23456888999999997754 33332 2356666777
Q ss_pred CCcEEcccHHH
Q 017733 315 YTDLVAFGRLF 325 (367)
Q Consensus 315 ~~D~V~~gR~~ 325 (367)
+.+|..+-.+
T Consensus 228 -v~~v~~~~~~ 237 (287)
T 3b8i_A 228 -VRVVVNGHAA 237 (287)
T ss_dssp -EEEEECCCHH
T ss_pred -CcEEEEChHH
Confidence 8888876443
No 345
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.51 E-value=0.12 Score=46.33 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
+-.+-|+.+.+.|++.|||-. |+. -..+.|+++|++++.-.++. ..
T Consensus 47 ~a~~~a~al~~gGi~~iEvt~----------------~t~-----------~a~e~I~~l~~~~~~~~iGa--GT----- 92 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEITF----------------RSD-----------AAVEAIRLLRQAQPEMLIGA--GT----- 92 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEEET----------------TST-----------THHHHHHHHHHHCTTCEEEE--EC-----
T ss_pred HHHHHHHHHHHCCCCEEEEeC----------------CCC-----------CHHHHHHHHHHhCCCCEEeE--CC-----
Confidence 346677788899999999842 222 14799999999986323443 11
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
-.+.+ -++...++|++|++. +. ...+.++..++ ..+|++. |-.|+.++.++++.| +|+|
T Consensus 93 ----Vlt~~----~a~~Ai~AGA~fIvs--P~--------~~~~vi~~~~~-~gi~~ip-Gv~TptEi~~A~~~G-ad~v 151 (232)
T 4e38_A 93 ----ILNGE----QALAAKEAGATFVVS--PG--------FNPNTVRACQE-IGIDIVP-GVNNPSTVEAALEMG-LTTL 151 (232)
T ss_dssp ----CCSHH----HHHHHHHHTCSEEEC--SS--------CCHHHHHHHHH-HTCEEEC-EECSHHHHHHHHHTT-CCEE
T ss_pred ----cCCHH----HHHHHHHcCCCEEEe--CC--------CCHHHHHHHHH-cCCCEEc-CCCCHHHHHHHHHcC-CCEE
Confidence 11233 344556789999972 21 12344444444 3677665 444999999999999 9999
Q ss_pred cccHHHHhC----CchHHHHHh
Q 017733 320 AFGRLFLAN----PDLPKRFEL 337 (367)
Q Consensus 320 ~~gR~~lad----P~l~~k~~~ 337 (367)
.+ +-++ |++.+.++.
T Consensus 152 K~---FPa~~~gG~~~lkal~~ 170 (232)
T 4e38_A 152 KF---FPAEASGGISMVKSLVG 170 (232)
T ss_dssp EE---CSTTTTTHHHHHHHHHT
T ss_pred EE---CcCccccCHHHHHHHHH
Confidence 88 3333 466777765
No 346
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=95.50 E-value=0.18 Score=47.25 Aligned_cols=130 Identities=13% Similarity=0.095 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|.+++ +.+++.++.. +|.+=++
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~~Er~~v~----~~~~~~~~grvpviaGvg---- 88 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNA----------------EAFLLTREERAQLI----ATARKAVGPDFPIMAGVG---- 88 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGG----------------TGGGSCHHHHHHHH----HHHHHHHCTTSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEeCcccc----------------ChhhCCHHHHHHHH----HHHHHHhCCCCcEEEeCC----
Confidence 445555566778999999877554 222 2455565544 4455555433 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhcCCcEEEe-------CC-CCHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAFEGTFIAA-------GG-YSRDEGN 308 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~-------Gg-it~~~a~ 308 (367)
.++.++++++++..++.|+|.+-+..+.+.. +.+......+.+.|.+++++||+.- |- ++++...
T Consensus 89 ------~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~ 162 (318)
T 3qfe_A 89 ------AHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMIT 162 (318)
T ss_dssp ------CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHH
Confidence 3356789999999999999999887664432 2223334456778889999996642 22 4788888
Q ss_pred HHHH-cCCCcEEcc
Q 017733 309 KAVA-ANYTDLVAF 321 (367)
Q Consensus 309 ~~L~-~G~~D~V~~ 321 (367)
++.+ .. .+|++
T Consensus 163 ~La~~~p--nIvgi 174 (318)
T 3qfe_A 163 TIARKNP--NVVGV 174 (318)
T ss_dssp HHHHHCT--TEEEE
T ss_pred HHHhhCC--CEEEE
Confidence 8886 33 34544
No 347
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=95.43 E-value=0.35 Score=45.15 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-++...++|.|||-+.+.-| |+- -|.+.|.+++. .+.+.+|..+|.+=++
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Lt~~Er~~v~~----~~v~~~grvpViaGvg----- 84 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILG----------------EAPKLDAAEAEAVAT----RFIKRAKSMQVIVGVS----- 84 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGG----------------TGGGSCHHHHHHHHH----HHHHHCTTSEEEEECC-----
T ss_pred HHHHHHHHHHHCCCCEEEeCccCc----------------ChhhCCHHHHHHHHH----HHHHHcCCCcEEEecC-----
Confidence 444555556779999999876554 222 24556655544 4444444336655333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEe------C-CCCHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAA------G-GYSRDEGNK 309 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~------G-git~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+ . .+......+.+.|.++++ +||+.- | .++++...+
T Consensus 85 -----~~~t~~ai~la~~A~~~Gadavlv~~P~~-~-~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~ 157 (313)
T 3dz1_A 85 -----APGFAAMRRLARLSMDAGAAGVMIAPPPS-L-RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQ 157 (313)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEECCCTT-C-CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHcCCCEEEECCCCC-C-CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHH
Confidence 33567899999999999999998765542 2 223334456778888888 997763 2 248888888
Q ss_pred HHH
Q 017733 310 AVA 312 (367)
Q Consensus 310 ~L~ 312 (367)
+.+
T Consensus 158 La~ 160 (313)
T 3dz1_A 158 IVM 160 (313)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 348
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=95.41 E-value=0.13 Score=47.56 Aligned_cols=118 Identities=16% Similarity=0.148 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
+.+.+-+....+.|.|||-+.+.-| |+- -|.+.|. ++++.+++.++. |.+=.+
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttG----------------E~~~Ls~~Er~----~v~~~~~~~~~g--vi~Gvg---- 72 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTG----------------LGPALSLQEKM----ELTDAATSAARR--VIVQVA---- 72 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTT----------------TGGGSCHHHHH----HHHHHHHHHCSS--EEEECC----
T ss_pred HHHHHHHHHHHHCCCCEEEECcccc----------------ChhhCCHHHHH----HHHHHHHHHhCC--EEEeeC----
Confidence 3455566667789999999876543 222 2445555 455555555543 333222
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+.. + +......+.+.|.+++++||+.-. + ++++...+
T Consensus 73 ------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 73 ------SLNADEAIALAKYAESRGAEAVASLPPYYFPRL-SERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 3356778999999999999999887776643 2 233344566788888999977532 2 47887766
No 349
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=95.40 E-value=0.1 Score=48.69 Aligned_cols=130 Identities=13% Similarity=0.104 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....++|.|||-+.+.-| |+- -|.+.|. ++++.+++.++.. +|.+=++
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~~Er~----~v~~~~~~~~~gr~pviaGvg---- 91 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNG----------------EFPFLTSSERL----EVVSRVRQAMPKNRLLLAGSG---- 91 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGG----------------TGGGSCHHHHH----HHHHHHHHTSCTTSEEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------chhhCCHHHHH----HHHHHHHHHcCCCCcEEEecC----
Confidence 444445556689999999877554 211 2345554 4555566666433 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc-CCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-TDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+..+ .+......+.+.|.+++++||+.-. | ++++...+
T Consensus 92 ------~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~ 165 (307)
T 3s5o_A 92 ------CESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVT 165 (307)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHH
Confidence 23567789999999999999998877765432 2333344567788888999977543 2 48888888
Q ss_pred HHHcCCCcEEcc
Q 017733 310 AVAANYTDLVAF 321 (367)
Q Consensus 310 ~L~~G~~D~V~~ 321 (367)
+.+.. .+|++
T Consensus 166 La~~p--nIvgi 175 (307)
T 3s5o_A 166 LSQHP--NIVGM 175 (307)
T ss_dssp HHTST--TEEEE
T ss_pred HhcCC--CEEEE
Confidence 77443 34544
No 350
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.34 E-value=0.15 Score=48.71 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR 290 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~ 290 (367)
-..+.|+++|+.. ..++++-+... + .+.++.+.++|+|+|++....- ......+.++.+++
T Consensus 82 ~~~~~I~~vk~~~-~~pvga~ig~~----------~----~e~a~~l~eaGad~I~ld~a~G----~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 82 SQVNEVLKVKNSG-GLRVGAAIGVN----------E----IERAKLLVEAGVDVIVLDSAHG----HSLNIIRTLKEIKS 142 (361)
T ss_dssp HHHHHHHHHHHTT-CCCCEEEECTT----------C----HHHHHHHHHTTCSEEEECCSCC----SBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-CceEEEEeCCC----------H----HHHHHHHHHcCcCeEEEeCCCC----CcHHHHHHHHHHHH
Confidence 3457777777653 23666655431 1 3466777889999999853311 11223456788888
Q ss_pred hcCCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 291 AFEGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 291 ~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
.+++||++.+..|+++++.+++.| +|+|.++
T Consensus 143 ~~~~~Vivg~v~t~e~A~~l~~aG-aD~I~VG 173 (361)
T 3khj_A 143 KMNIDVIVGNVVTEEATKELIENG-ADGIKVG 173 (361)
T ss_dssp HCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred hcCCcEEEccCCCHHHHHHHHHcC-cCEEEEe
Confidence 888898875545999999999999 9999874
No 351
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=95.27 E-value=0.18 Score=47.19 Aligned_cols=139 Identities=17% Similarity=0.090 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCc-hhhHhHHHHHHHHHHHHHh--CCcceEEEeCCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGS-LENRCRFALEVVEAVVREI--GAERVGMRLSPY 235 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs-~enr~r~~~eii~aiR~~v--g~~~i~vrls~~ 235 (367)
++..+.+++..++|..||.|-.+-+ .+|....||. +.. .....+.|++++++. ++..|.-|....
T Consensus 116 ~~v~~tv~~l~~aGaagv~iED~~~-----------~k~cgH~~gk~L~p-~~e~~~rI~Aa~~A~~~~~~~I~ARtda~ 183 (318)
T 1zlp_A 116 LNVQRFIRELISAGAKGVFLEDQVW-----------PKKCGHMRGKAVVP-AEEHALKIAAAREAIGDSDFFLVARTDAR 183 (318)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECBCS-----------SCCCSSSSCCCBCC-HHHHHHHHHHHHHHHTTSCCEEEEEECTH
T ss_pred HHHHHHHHHHHHcCCcEEEECCCCC-----------CccccCCCCCccCC-HHHHHHHHHHHHHhcccCCcEEEEeeHHh
Confidence 3567788888889999999987642 4666655653 332 223455666666665 322455565431
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe---CCCCH-HHHHHHH
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA---GGYSR-DEGNKAV 311 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~---Ggit~-~~a~~~L 311 (367)
. ....+++++-++.++++|+|.|-+... +..+.++.+.+.+++|+++| ++.++ -..+++-
T Consensus 184 a-------~~gl~~ai~Ra~Ay~eAGAd~i~~e~~---------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~ 247 (318)
T 1zlp_A 184 A-------PHGLEEGIRRANLYKEAGADATFVEAP---------ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFK 247 (318)
T ss_dssp H-------HHHHHHHHHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHH
T ss_pred h-------hcCHHHHHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHH
Confidence 0 112467888889999999998876321 23466888999999998654 23221 2255666
Q ss_pred HcCCCcEEcccHHHH
Q 017733 312 AANYTDLVAFGRLFL 326 (367)
Q Consensus 312 ~~G~~D~V~~gR~~l 326 (367)
+.| +.+|.++-.++
T Consensus 248 ~lG-v~~v~~~~~~~ 261 (318)
T 1zlp_A 248 EMG-FHLIAHSLTAV 261 (318)
T ss_dssp HHT-CCEEEECSHHH
T ss_pred HcC-CeEEEEchHHH
Confidence 677 88888876654
No 352
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=95.23 E-value=0.12 Score=46.13 Aligned_cols=39 Identities=10% Similarity=0.081 Sum_probs=30.5
Q ss_pred hcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 291 AFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 291 ~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
....-|-++.|++.+....+.+--.+.=|.+|..++++-
T Consensus 184 ~lGL~VnAGHgL~y~Nv~~ia~ip~i~ElnIGHaiia~A 222 (243)
T 1m5w_A 184 SLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRA 222 (243)
T ss_dssp HTTCEEEEESSCCTTTHHHHHTCTTEEEEEECHHHHHHH
T ss_pred HcCCEEecCCCCCHHHHHHHhhCCCCeEEccCHHHHHHH
Confidence 346679999999888777766656688899999998864
No 353
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=95.23 E-value=0.19 Score=47.06 Aligned_cols=86 Identities=8% Similarity=-0.019 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc
Q 017733 213 LEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF 292 (367)
Q Consensus 213 ~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~ 292 (367)
.+.+++.|+..+..+|.|-.. +.+++.+. .++|+|+|-+...+ ...++.+.+.+
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd------------tldea~eA----l~aGaD~I~LDn~~----------~~~l~~av~~l 272 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE------------TLAELEEA----ISAGADIIMLDNFS----------LEMMREAVKIN 272 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES------------SHHHHHHH----HHTTCSEEEEESCC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEEC------------CHHHHHHH----HHcCCCEEEECCCC----------HHHHHHHHHHh
Confidence 567777888776545555322 24443332 34799999886431 23344444444
Q ss_pred --CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHH
Q 017733 293 --EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 293 --~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
++++.++||+|++.+.++.+.| +|++++|.-.
T Consensus 273 ~~~v~ieaSGGIt~~~I~~~a~tG-VD~isvGalt 306 (320)
T 3paj_A 273 AGRAALENSGNITLDNLKECAETG-VDYISVGALT 306 (320)
T ss_dssp TTSSEEEEESSCCHHHHHHHHTTT-CSEEECTHHH
T ss_pred CCCCeEEEECCCCHHHHHHHHHcC-CCEEEECcee
Confidence 4679999999999999999998 9999999843
No 354
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=95.20 E-value=0.31 Score=45.50 Aligned_cols=143 Identities=10% Similarity=0.046 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-++...++|.|||-+.+.-| |+- -|.+.|. ++++.+++.++.. +|.+=++
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~~Er~----~v~~~~~~~~~grvpViaGvg---- 84 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTA----------------ESPTLTHDEEL----ELFAAVQKVVNGRVPLIAGVG---- 84 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTT----------------TGGGSCHHHHH----HHHHHHHHHSCSSSCEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHH----HHHHHHHHHhCCCCcEEEeCC----
Confidence 445555566689999999877554 222 2445555 4555555665433 5555333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCc-cEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKL-LYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gv-d~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|. |.+-+..+.+..+ +......+.+.|.+++++||+.-. + ++++...+
T Consensus 85 ------~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 157 (311)
T 3h5d_A 85 ------TNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKP-SQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLR 157 (311)
T ss_dssp ------CSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCC-CHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred ------CcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCC-CHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHH
Confidence 2356779999999999986 9998877765543 223344567788898999977542 3 48888888
Q ss_pred HHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 310 AVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
+.+.. .+|++==.. |.+...++++
T Consensus 158 La~~p--nIvgiKdss--d~~~~~~~~~ 181 (311)
T 3h5d_A 158 LADHP--NIIGVKECT--SLANMAYLIE 181 (311)
T ss_dssp HHTST--TEEEEEECS--CHHHHHHHHH
T ss_pred HhcCC--CEEEEEeCC--CHHHHHHHHH
Confidence 77544 355542221 4444555544
No 355
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=95.19 E-value=0.038 Score=49.24 Aligned_cols=71 Identities=20% Similarity=0.207 Sum_probs=51.1
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHH--HHHHHHHcCCCcEEcccHHHHhC
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRD--EGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~--~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..+++...++|+|.+-++ + . ....++.||+.++.-++.+.|+.++ +..++++.| +|++.+||+...-
T Consensus 125 ~~~a~~a~~~g~~GvV~s-a------t---~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~G-ad~iVVGR~I~~A 193 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVG-G------T---KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAG-ADYEIIGRSIYNA 193 (222)
T ss_dssp HHHHHHHHHHCCSEEEEC-T------T---CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHT-CSEEEECHHHHTS
T ss_pred HHHHHHHHHhCCCEEEEC-C------C---CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcC-CCEEEECHHhcCC
Confidence 457777778899876543 1 1 1244677888876567778888554 456778888 9999999999987
Q ss_pred CchH
Q 017733 329 PDLP 332 (367)
Q Consensus 329 P~l~ 332 (367)
+|-.
T Consensus 194 ~dP~ 197 (222)
T 4dbe_A 194 GNPL 197 (222)
T ss_dssp SSHH
T ss_pred CCHH
Confidence 6643
No 356
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=95.16 E-value=0.59 Score=44.41 Aligned_cols=164 Identities=12% Similarity=0.004 Sum_probs=103.1
Q ss_pred HHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCC
Q 017733 95 DAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFD 174 (367)
Q Consensus 95 ~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfd 174 (367)
.++++++.++++.|-|.-. ...+.|+.+++.-.+..+.+.++||.
T Consensus 93 ~~A~~~~VPVaLHlDHg~~-----------------------------------~~~~~i~~~i~a~~~~~~~~~~~GFt 137 (357)
T 3qm3_A 93 LLAKAYGVPVILHTDHAAR-----------------------------------KLLPWIDGLIEANAQYKKTHGQALFS 137 (357)
T ss_dssp HHHHHHTCEEEEEECCCCG-----------------------------------GGHHHHHHHHHHHHHHHHHHSSCSCS
T ss_pred HHHHHCCCcEEEECCCCCc-----------------------------------cchHHHHHHHHHhHHHHhhhcCCCCC
Confidence 3455678999999987410 01255677776655566777788999
Q ss_pred EEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE---eCCCccccc------cCCCC
Q 017733 175 GVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR---LSPYAECAE------AVDSN 245 (367)
Q Consensus 175 gVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr---ls~~~~~~~------~~~~~ 245 (367)
-|-+.+.|- ++|...+.+.++++..++.- -.|-.- +...++... .....
T Consensus 138 SVMiDgS~l--------------------p~eENI~~Tk~vv~~ah~~g--vsVEaELG~igG~Edgv~~~~~~~~~~yT 195 (357)
T 3qm3_A 138 SHMLDLSEE--------------------SLEENLSTCEVYLQKLDALG--VALEIELGCTGGEEDGVDNTGIDNSKLYT 195 (357)
T ss_dssp EEECCCTTS--------------------CHHHHHHHHHHHHHHHHHHT--CEEEEECCCCCC-----CCSSTTCTTTSC
T ss_pred EEEEeCCCC--------------------CHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeccccCCccccccccccccC
Confidence 999988761 56778999999999998752 112222 222222110 01134
Q ss_pred hHHHHHHHHHHhhhc-CccEEEEecCCccccCC-c-h-hhHHHHHHH----HHhc------CCcEEEeCC--CCHHHHHH
Q 017733 246 PEALGLYMAKALNKF-KLLYLHVIEPRMIQLTD-K-S-ETQRSLLSM----RRAF------EGTFIAAGG--YSRDEGNK 309 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~-Gvd~i~v~~~~~~~~~~-~-~-~~~~~~~~i----r~~~------~~pvi~~Gg--it~~~a~~ 309 (367)
+++++.++++.+-.. |+|+|-++-++.+..+. . + ...+.++.+ ++.+ ++|++.=|+ ++.++..+
T Consensus 196 ~Peea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGgSG~p~e~i~~ 275 (357)
T 3qm3_A 196 QPEDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGGSGSELKDIKN 275 (357)
T ss_dssp CHHHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSCTTCCHHHHHH
T ss_pred CHHHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCCCCCCHHHHHH
Confidence 578888898876422 68899888777654442 1 1 123445544 4443 578776554 57899999
Q ss_pred HHHcCC
Q 017733 310 AVAANY 315 (367)
Q Consensus 310 ~L~~G~ 315 (367)
+++.|.
T Consensus 276 ai~~GV 281 (357)
T 3qm3_A 276 AVSYGV 281 (357)
T ss_dssp HHHTTE
T ss_pred HHHCCc
Confidence 999993
No 357
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=95.14 E-value=0.13 Score=47.66 Aligned_cols=117 Identities=15% Similarity=0.178 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-+....+.|.|||-+.+.-| |+- -|.+.|. ++++.+++.++. |.+=++
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttG----------------E~~~Ls~eEr~----~v~~~~~~~~~g--viaGvg----- 73 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTG----------------LGPSLSPEEKL----ENLKAVYDVTNK--IIFQVG----- 73 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTT----------------TGGGSCHHHHH----HHHHHHHTTCSC--EEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHH----HHHHHHHHHcCC--EEEecC-----
Confidence 445555566779999999876543 222 2445554 455555555543 333222
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNK 309 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~ 309 (367)
.++.++++++++..++.|+|.+-+..+.+.. + +......+.+.|.+++++||+.-. | ++++...+
T Consensus 74 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 74 -----GLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRM-SEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp -----CSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSC-CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-CHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 3356778999999999999999887776654 2 223344566788888899977532 3 47887766
No 358
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=95.13 E-value=0.08 Score=49.27 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=83.8
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
..++|.++|+|.|.|..+.- +. ++..+.+-+++.-.+.+.++++.+|+.- - .|..-++..-...+ .+
T Consensus 88 ~i~~a~~aG~~~v~i~~~~s--------~~--~~~~~~~~s~ee~l~~~~~~v~~a~~~G-~-~V~~~l~~~~~~e~-~~ 154 (302)
T 2ftp_A 88 GFEAALESGVKEVAVFAAAS--------EA--FSQRNINCSIKDSLERFVPVLEAARQHQ-V-RVRGYISCVLGCPY-DG 154 (302)
T ss_dssp HHHHHHHTTCCEEEEEEESC--------HH--HHHHHHSSCHHHHHHHHHHHHHHHHHTT-C-EEEEEEECTTCBTT-TB
T ss_pred HHHHHHhCCcCEEEEEEecC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHCC-C-eEEEEEEEEeeCCc-CC
Confidence 34566779999998754331 11 1112234466767777888888887752 2 22212211000000 11
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeC----CCCHHHHHHHHHcCCCcE
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAG----GYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G----git~~~a~~~L~~G~~D~ 318 (367)
..+.+.+.++++.+.+.|+|.|.+..- .+ ...+......++.+++.+ ++|+..=+ |+....+..+++.| ++.
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT-~G-~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aG-a~~ 231 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDT-IG-VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEG-IAV 231 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEES-SS-CCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTT-CCE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCC-CC-CcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhC-CCE
Confidence 345788999999999999999988632 11 112222346678888888 46755433 33578889999999 676
Q ss_pred Ec
Q 017733 319 VA 320 (367)
Q Consensus 319 V~ 320 (367)
|-
T Consensus 232 vd 233 (302)
T 2ftp_A 232 FD 233 (302)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 359
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.08 E-value=0.2 Score=44.48 Aligned_cols=107 Identities=11% Similarity=0.027 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+.++.+.+.|++.|||-. ++. -..+.++++++.+++-.++.-. .
T Consensus 30 ~~~~~~~al~~gGv~~iel~~----------------k~~-----------~~~~~i~~l~~~~~~l~vgaGt-v----- 76 (224)
T 1vhc_A 30 DILPLADTLAKNGLSVAEITF----------------RSE-----------AAADAIRLLRANRPDFLIAAGT-V----- 76 (224)
T ss_dssp GHHHHHHHHHHTTCCEEEEET----------------TST-----------THHHHHHHHHHHCTTCEEEEES-C-----
T ss_pred HHHHHHHHHHHcCCCEEEEec----------------cCc-----------hHHHHHHHHHHhCcCcEEeeCc-E-----
Confidence 456778888899999999842 111 1367889899988642333321 1
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
- ..+ -++...+.|+|++|. +. .....++..++ ...+++. |-.|++++.++++.| +|+|
T Consensus 77 ----l-~~d----~~~~A~~aGAd~v~~--p~--------~d~~v~~~ar~-~g~~~i~-Gv~t~~e~~~A~~~G-ad~v 134 (224)
T 1vhc_A 77 ----L-TAE----QVVLAKSSGADFVVT--PG--------LNPKIVKLCQD-LNFPITP-GVNNPMAIEIALEMG-ISAV 134 (224)
T ss_dssp ----C-SHH----HHHHHHHHTCSEEEC--SS--------CCHHHHHHHHH-TTCCEEC-EECSHHHHHHHHHTT-CCEE
T ss_pred ----e-eHH----HHHHHHHCCCCEEEE--CC--------CCHHHHHHHHH-hCCCEEe-ccCCHHHHHHHHHCC-CCEE
Confidence 0 122 233445679999973 21 12334555555 6667655 334899999999999 9999
Q ss_pred cc
Q 017733 320 AF 321 (367)
Q Consensus 320 ~~ 321 (367)
.+
T Consensus 135 k~ 136 (224)
T 1vhc_A 135 KF 136 (224)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 360
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=95.03 E-value=0.59 Score=41.90 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHHH-----------HHHHHHcC
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRDE-----------GNKAVAAN 314 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~~-----------a~~~L~~G 314 (367)
.+....+++...++|++-+-++ + .-...||+.++. .++.+.|+.++. ..++++.|
T Consensus 143 ~~~v~~~A~~a~~~g~~GvV~s-~------------~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~~~~aG 209 (239)
T 3tr2_A 143 PDIVCRMATLAKSAGLDGVVCS-A------------QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRAAIQAG 209 (239)
T ss_dssp HHHHHHHHHHHHHHTCCEEECC-H------------HHHHHHHTTCCTTSEEEECCBC----------CCBCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEC-c------------hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHHHHHcC
Confidence 3455677777778898866432 1 123457877753 467777774432 55788898
Q ss_pred CCcEEcccHHHHhCCchHH
Q 017733 315 YTDLVAFGRLFLANPDLPK 333 (367)
Q Consensus 315 ~~D~V~~gR~~ladP~l~~ 333 (367)
+|++.+||+.+..+|-..
T Consensus 210 -ad~lVvGr~I~~a~dp~~ 227 (239)
T 3tr2_A 210 -SDYLVIGRPITQSTDPLK 227 (239)
T ss_dssp -CSEEEECHHHHTSSSHHH
T ss_pred -CCEEEEChHHhCCCCHHH
Confidence 999999999998665433
No 361
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=95.01 E-value=1.5 Score=41.05 Aligned_cols=174 Identities=12% Similarity=0.085 Sum_probs=94.1
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCC-ccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAG-RVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPL--SIEEIPKIVNDFRL 163 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~G-r~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~m--t~~eI~~ii~~f~~ 163 (367)
.+.+.++++.++++|-++++.+ |.+ ..+. |.. + ..|... +.++..+-+.+|..
T Consensus 59 ~~~~~~~~~~A~~~GlkV~ld~-Hysd~Wad------------Pg~-Q----------~~p~~W~~~~~~~~~~~~~yt~ 114 (332)
T 1hjs_A 59 LDYNIAIAKRAKAAGLGVYIDF-HYSDTWAD------------PAH-Q----------TMPAGWPSDIDNLSWKLYNYTL 114 (332)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE-CCSSSCCB------------TTB-C----------BCCTTCCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-ccCCCcCC------------ccc-c----------CCccccccchHHHHHHHHHHHH
Confidence 4678889999999999999997 532 1111 110 0 011112 44555555545544
Q ss_pred -HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhC-Cc-ceEEEeCCCccccc
Q 017733 164 -AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIG-AE-RVGMRLSPYAECAE 240 (367)
Q Consensus 164 -aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg-~~-~i~vrls~~~~~~~ 240 (367)
.+.+.++.|.+..-+..++- +...++.|.-. + ...++..+|+.+.+++||++.+ +. .|.+-+..
T Consensus 115 ~vl~~l~~~g~~~~~v~vGNE-i~~g~~w~~g~--~----~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~------ 181 (332)
T 1hjs_A 115 DAANKLQNAGIQPTIVSIGNE-IRAGLLWPTGR--T----ENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN------ 181 (332)
T ss_dssp HHHHHHHHTTCCCSEEEESSS-GGGEETBTTEE--T----TCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC------
T ss_pred HHHHHHHHcCCCCCEEEEeec-ccccccCcCCC--c----cCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC------
Confidence 44555566643333444554 33345444211 1 1467888999999999998872 34 45553321
Q ss_pred cCCCChHHHHHHHHHHhhhcC------ccEEEEecCCcccc-CCchhhHHHHHHHHHhcCCcEEEeC
Q 017733 241 AVDSNPEALGLYMAKALNKFK------LLYLHVIEPRMIQL-TDKSETQRSLLSMRRAFEGTFIAAG 300 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~G------vd~i~v~~~~~~~~-~~~~~~~~~~~~ir~~~~~pvi~~G 300 (367)
....+....+.+.+.+.| +|+|.++--.+... .........++.+.++..+||+.+.
T Consensus 182 ---~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~~~~~~l~~~l~~~~~rygKpv~v~E 245 (332)
T 1hjs_A 182 ---GWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVVE 245 (332)
T ss_dssp ---TTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTTCCHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred ---ccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 112344445556665554 67777652222111 1111122456677777888977653
No 362
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=94.98 E-value=0.11 Score=47.89 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-++...+.|.|||-+.+.-| |+- -|.+.|. ++++.+++.++. |.+=++
T Consensus 21 ~l~~lv~~li~~Gv~gl~v~GtTG----------------E~~~Ls~eEr~----~v~~~~~~~~~g--ViaGvg----- 73 (288)
T 2nuw_A 21 ALKTHAKNLLEKGIDAIFVNGTTG----------------LGPALSKDEKR----QNLNALYDVTHK--LIFQVG----- 73 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEETSTTT----------------TGGGSCHHHHH----HHHHHHTTTCSC--EEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEECcccc----------------ChhhCCHHHHH----HHHHHHHHHhCC--eEEeeC-----
Confidence 445555566779999999876543 222 2445554 455555555543 333222
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccc-cCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ-LTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+.. + +......+.+.|.+++++||+.-. | ++++...++
T Consensus 74 -----~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 147 (288)
T 2nuw_A 74 -----SLNLNDVMELVKFSNEMDILGVSSHSPYYFPRL-PEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL 147 (288)
T ss_dssp -----CSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSC-CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc
Confidence 3356778999999999999999887776654 2 223344566788888999977532 3 478877666
No 363
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=94.79 E-value=0.51 Score=43.57 Aligned_cols=142 Identities=10% Similarity=0.028 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC--C-chhhHhHHHHHHHHHHHHHh--CCcceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG--G-SLENRCRFALEVVEAVVREI--GAERVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG--g-s~enr~r~~~eii~aiR~~v--g~~~i~vrls 233 (367)
++..+.+++..++|..||.|-.+.+ .+|....| | .+.... -..+-|++++++. ++..|.-|..
T Consensus 90 ~~~~~~v~~l~~aGa~gv~iED~~~-----------~k~cgH~~~~~k~l~p~~-e~~~kI~Aa~~a~~~~~~~i~aRtd 157 (290)
T 2hjp_A 90 VNVHYVVPQYEAAGASAIVMEDKTF-----------PKDTSLRTDGRQELVRIE-EFQGKIAAATAARADRDFVVIARVE 157 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCS-----------SCCC-------CCBCCHH-HHHHHHHHHHHHCSSTTSEEEEEEC
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCC-----------CccccccccCCCcccCHH-HHHHHHHHHHHhcccCCcEEEEeeh
Confidence 4567788888899999999987642 35555555 3 233222 2345566666663 3234555664
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCC-CCHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGG-YSRDEGNKA 310 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Gg-it~~~a~~~ 310 (367)
.. . .....+++++=++.++++|+|.|-+..+ .+....++.+.+.++ +|++++-. +..-..+++
T Consensus 158 a~--~----a~~g~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL 223 (290)
T 2hjp_A 158 AL--I----AGLGQQEAVRRGQAYEEAGADAILIHSR--------QKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADI 223 (290)
T ss_dssp TT--T----TTCCHHHHHHHHHHHHHTTCSEEEECCC--------CSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHH
T ss_pred Hh--h----ccccHHHHHHHHHHHHHcCCcEEEeCCC--------CCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHH
Confidence 31 0 1223688888899999999998876421 112345788888888 89987621 111123556
Q ss_pred HHcCCCcEEcccHHHH
Q 017733 311 VAANYTDLVAFGRLFL 326 (367)
Q Consensus 311 L~~G~~D~V~~gR~~l 326 (367)
-+-|++.+|..+-.++
T Consensus 224 ~~lG~v~~v~~~~~~~ 239 (290)
T 2hjp_A 224 AALSKVGIVIYGNHAI 239 (290)
T ss_dssp HTCTTEEEEEECSHHH
T ss_pred HhcCCeeEEEechHHH
Confidence 6667688888876554
No 364
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=94.78 E-value=0.18 Score=45.75 Aligned_cols=38 Identities=13% Similarity=0.049 Sum_probs=28.1
Q ss_pred cCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHhCC
Q 017733 292 FEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLANP 329 (367)
Q Consensus 292 ~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP 329 (367)
...-|-++.|++.+....+.+--.+.=|.+|..++++-
T Consensus 213 lGL~VnAGHGL~y~Nv~~ia~ip~i~ElnIGHaiIa~A 250 (278)
T 3gk0_A 213 LGLKVNAGHGLHYTNVQAIAALPGIAELNIGHAIVAHA 250 (278)
T ss_dssp TTCEEEECTTCCTTTHHHHHTCTTEEEEEECHHHHHHH
T ss_pred cCCEEecCCCCCHHHHHHHHhCCCCeEEecCHHHHHHH
Confidence 45678888888777665554444578899999999874
No 365
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=94.78 E-value=0.27 Score=44.64 Aligned_cols=139 Identities=12% Similarity=0.017 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEE
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMR 231 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vr 231 (367)
||...+..|++++. .+.|+|.|-+|+..| .+.+++.++..+.. .|.++
T Consensus 87 DI~nTv~~~a~~~~--~~lg~d~vTvh~~~G-----------------------------~~~l~~~~~~~~~gv~vL~~ 135 (255)
T 3qw3_A 87 DIADTADAYATSAF--KHLNAHAITASPYMG-----------------------------SDSLQPFMRYPDKAVFVLCK 135 (255)
T ss_dssp CCHHHHHHHHHHHH--TTSCCSEEEECCTTC-----------------------------HHHHHHHHTCTTSEEEEEEE
T ss_pred CcHHHHHHHHHHHH--HHcCCCEEEEcccCC-----------------------------HHHHHHHHHhhCCceEEEEe
Confidence 56666666665553 258999999987544 23444444433322 46667
Q ss_pred eCCCc--cccccC-CCCh-HHHHHHHHHH-hhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCH--
Q 017733 232 LSPYA--ECAEAV-DSNP-EALGLYMAKA-LNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSR-- 304 (367)
Q Consensus 232 ls~~~--~~~~~~-~~~~-~~~~~~l~~~-L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~-- 304 (367)
+|-.+ ++.+.+ .+.+ .+....+++. ..+.|++-+-++ .+ ...-++.||+.++...+.+-|+.+
T Consensus 136 tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~-at---------~~~e~~~ir~~~~~~~~l~PGIg~qg 205 (255)
T 3qw3_A 136 TSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVG-AT---------DPVALARVRARAPTLWFLVPGIGAQG 205 (255)
T ss_dssp CCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEEC-SS---------CHHHHHHHHHHCSSCCEEECCC----
T ss_pred CCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEEC-CC---------CHHHHHHHHHHCCCCeEEECCcCCCC
Confidence 76532 122211 0112 3445556665 556787766542 21 123466788887533234555422
Q ss_pred HHHHHHHHcCCCc------EEcccHHHHhCCchHH
Q 017733 305 DEGNKAVAANYTD------LVAFGRLFLANPDLPK 333 (367)
Q Consensus 305 ~~a~~~L~~G~~D------~V~~gR~~ladP~l~~ 333 (367)
.+.+++++.| +| ++.+||+.+.-+|-..
T Consensus 206 ~tp~~a~~~G-~d~~~~~~livvGR~I~~A~dp~~ 239 (255)
T 3qw3_A 206 GSLKASLDAG-LRADGSGMLINVSRGLARAADPRA 239 (255)
T ss_dssp -CHHHHHHHH-CCTTSCCEEEEESHHHHTSSCHHH
T ss_pred CCHHHHHHcC-CCcccCeeEEEeChhhcCCCCHHH
Confidence 2344556666 66 4999999998777443
No 366
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=94.60 E-value=0.21 Score=48.93 Aligned_cols=68 Identities=6% Similarity=0.067 Sum_probs=50.4
Q ss_pred hHHHHH-HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC--CHHHHHHHHHcCCCcEEcc
Q 017733 246 PEALGL-YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY--SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 246 ~~~~~~-~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~ 321 (367)
+.+++. .+++.+++.++.||+ +|- .+.++...+.+++..++||++...+ +++++.++|+.+.||.|.+
T Consensus 274 t~~eai~~~~~~l~~y~i~~iE--dPl------~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~i 344 (436)
T 2al1_A 274 TGPQLADLYHSLMKRYPIVSIE--DPF------AEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLL 344 (436)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--CCS------CTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCcEEEE--CCC------CCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEe
Confidence 445555 456677889988887 441 2235566777888888999765554 5999999999999999876
No 367
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.55 E-value=0.21 Score=46.48 Aligned_cols=138 Identities=13% Similarity=0.021 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHh---CCc-ceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREI---GAE-RVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~v---g~~-~i~vrls 233 (367)
++..+.+++..++|..||.|-... ..+|+...+| .+...- ...+-|++.|++. +++ .|.-|.-
T Consensus 103 ~~v~~~v~~l~~aGaagv~iEDq~-----------~~k~cgh~~gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ARTD 170 (307)
T 3lye_A 103 IMVARTVEHYIRSGVAGAHLEDQI-----------LTKRCGHLSGKKVVSRD-EYLVRIRAAVATKRRLRSDFVLIARTD 170 (307)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCBC-----------CCC--------CBCCHH-HHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCC-----------CCcccCCCCCCeecCHH-HHHHHHHHHHHHHHhcCCCeEEEEech
Confidence 356777888899999999997654 2355554444 233222 2334455555443 555 5666775
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEe---CCCCH-HHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAA---GGYSR-DEGN 308 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~---Ggit~-~~a~ 308 (367)
... ....+++++-++...++|+|.|-+... ...+.++.+.+.++ +||.+| ++-+| -..+
T Consensus 171 a~~-------~~gldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~ 234 (307)
T 3lye_A 171 ALQ-------SLGYEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVAALAPWPLLLNSVENGHSPLITVE 234 (307)
T ss_dssp CHH-------HHCHHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHH
T ss_pred hhh-------ccCHHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHHHccCCceeEEeecCCCCCCCCHH
Confidence 421 113678888999999999998876422 12345667777765 786553 33222 1235
Q ss_pred HHHHcCCCcEEcccHHH
Q 017733 309 KAVAANYTDLVAFGRLF 325 (367)
Q Consensus 309 ~~L~~G~~D~V~~gR~~ 325 (367)
++-+-| +..|..+-.+
T Consensus 235 eL~~lG-v~~v~~~~~~ 250 (307)
T 3lye_A 235 EAKAMG-FRIMIFSFAT 250 (307)
T ss_dssp HHHHHT-CSEEEEETTT
T ss_pred HHHHcC-CeEEEEChHH
Confidence 555567 7888876533
No 368
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=94.52 E-value=0.24 Score=44.89 Aligned_cols=79 Identities=14% Similarity=0.039 Sum_probs=60.2
Q ss_pred HHHHHHHhhhcCccEEEEec-CCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 250 GLYMAKALNKFKLLYLHVIE-PRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~-~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
..++++..++.|++.|++.. ..+. ......++.+++.+++||+..+.+ ++.+..++++.| +|.|.++-..+.
T Consensus 67 p~~~A~~~~~~GA~~isvlt~~~~f-----~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~G-AD~VlL~~~~l~ 140 (254)
T 1vc4_A 67 PVEAALAYARGGARAVSVLTEPHRF-----GGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFG-ASAALLIVALLG 140 (254)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSS-----CCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTT-CSEEEEEHHHHG
T ss_pred HHHHHHHHHHcCCCEEEEecchhhh-----ccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcC-CCEEEECccchH
Confidence 35688899999999999832 1111 113456888999999999987777 788999999999 999999998887
Q ss_pred CCchHHHHH
Q 017733 328 NPDLPKRFE 336 (367)
Q Consensus 328 dP~l~~k~~ 336 (367)
+..+++.
T Consensus 141 --~~l~~l~ 147 (254)
T 1vc4_A 141 --ELTGAYL 147 (254)
T ss_dssp --GGHHHHH
T ss_pred --HHHHHHH
Confidence 5555543
No 369
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.48 E-value=0.12 Score=49.38 Aligned_cols=69 Identities=16% Similarity=0.159 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
...+.++.+.++|+|+|.++...- ......+.++.+|+.+ ++||++.+-.|+++|+.+++.| +|+|.++
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G----~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aG-aD~I~Vg 169 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHA----HAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCG-ADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCC----SSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCC----CcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcC-CCEEEEc
Confidence 356788889999999998853321 1112346788899987 5677774445999999999999 9999873
No 370
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=94.44 E-value=0.29 Score=48.02 Aligned_cols=68 Identities=4% Similarity=0.041 Sum_probs=50.1
Q ss_pred hHHHH-HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC--CHHHHHHHHHcCCCcEEcc
Q 017733 246 PEALG-LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY--SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 246 ~~~~~-~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~ 321 (367)
+.+++ ..+++.+++.++.||+ +|- .+.+....+.+++..++||++...+ +++++.++|+.+.||+|.+
T Consensus 271 t~~e~~~~~~~ll~~y~i~~IE--dPl------~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~i 341 (439)
T 2akz_A 271 TGDQLGALYQDFVRDYPVVSIE--DPF------DQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLL 341 (439)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEE--CCS------CTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCcEEE--CCC------CcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEe
Confidence 34544 4557777889988887 441 2234566778888888999765554 7999999999999999876
No 371
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=94.44 E-value=0.73 Score=43.61 Aligned_cols=142 Identities=10% Similarity=-0.000 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEe
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRL 232 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrl 232 (367)
-|+.+++.-.++.+.+.++||.-|-|.+.+- ++|...+.+.++++..++.- -.|-.-|
T Consensus 105 ~~~~~l~~~~~~i~~~i~~GFtSVMiDgS~l--------------------p~eENi~~Tk~vv~~ah~~g--vsVEaEl 162 (349)
T 3elf_A 105 YVRPLLAISAQRVSKGGNPLFQSHMWDGSAV--------------------PIDENLAIAQELLKAAAAAK--IILEIEI 162 (349)
T ss_dssp THHHHHHHHHHHHHTTCCCSCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHHTT--CEEEEEE
T ss_pred hhhhhHHHHHHHHHHHhhcCCCEEEecCCCC--------------------CHHHHHHHHHHHHHHHHHcC--CeEEEEe
Confidence 3566666656666667778899999887661 56778999999999988751 1222222
Q ss_pred ---CCCccccc----cCCCChHHHHHHHHHHhh--hcCccEEEEecCCccccCC-chh--hHHHHHHHHHhc--------
Q 017733 233 ---SPYAECAE----AVDSNPEALGLYMAKALN--KFKLLYLHVIEPRMIQLTD-KSE--TQRSLLSMRRAF-------- 292 (367)
Q Consensus 233 ---s~~~~~~~----~~~~~~~~~~~~l~~~L~--~~Gvd~i~v~~~~~~~~~~-~~~--~~~~~~~ir~~~-------- 292 (367)
...++... .....+++++.++++.+. ..|+|+|-++-++....+. ..+ ..+.++.|++.+
T Consensus 163 G~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~ 242 (349)
T 3elf_A 163 GVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPA 242 (349)
T ss_dssp SCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCT
T ss_pred eccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCcc
Confidence 22221110 011235677888887654 3459999998887654442 111 345677777665
Q ss_pred ---CCcEEEeC--CCCHHHHHHHHHcCCC
Q 017733 293 ---EGTFIAAG--GYSRDEGNKAVAANYT 316 (367)
Q Consensus 293 ---~~pvi~~G--git~~~a~~~L~~G~~ 316 (367)
++|++.=| |++.++..++++.|.+
T Consensus 243 ~~~~vpLVlHGgSG~p~e~i~~ai~~GV~ 271 (349)
T 3elf_A 243 DAKPFDFVFHGGSGSLKSEIEEALRYGVV 271 (349)
T ss_dssp TCCCCCEEECCCTTCCHHHHHHHHHTTEE
T ss_pred ccCCCcEEEeCCCCCCHHHHHHHHHcCCE
Confidence 57876655 4678999999999943
No 372
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.40 E-value=0.34 Score=45.01 Aligned_cols=138 Identities=11% Similarity=0.039 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHh---CCc-ceEEEeCC
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREI---GAE-RVGMRLSP 234 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~v---g~~-~i~vrls~ 234 (367)
+..+.+++..++|..||.|-... ..+|+...+| .+...- -..+-|++.|++. +++ .|.-|.-.
T Consensus 96 ~v~~tv~~l~~aGaagv~iEDq~-----------~~Krcgh~~gk~l~~~~-e~~~rI~Aa~~A~~~~~~d~~I~ARTDa 163 (302)
T 3fa4_A 96 MVARTTEQYSRSGVAAFHIEDQV-----------QTKRCGHLAGKILVDTD-TYVTRIRAAVQARQRIGSDIVVIARTDS 163 (302)
T ss_dssp HHHHHHHHHHHTTCCEEEECSBC-----------CC-------CCCBCCHH-HHHHHHHHHHHHHHHHTCCCEEEEEECC
T ss_pred HHHHHHHHHHHcCCcEEEECCCC-----------CCcccCCCCCCeecCHH-HHHHHHHHHHHHHHhcCCCEEEEEEecc
Confidence 56788888899999999987644 2355544444 333322 2334444444442 555 56778865
Q ss_pred CccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEe---CCCCH-HHHHH
Q 017733 235 YAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAA---GGYSR-DEGNK 309 (367)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~---Ggit~-~~a~~ 309 (367)
.. ....+++++-++...++|+|.|-+... ...+.++.+.+.++ .|+.+| ++-+| -..++
T Consensus 164 ~~-------~~gldeAi~Ra~ay~eAGAD~ifi~g~---------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~e 227 (302)
T 3fa4_A 164 LQ-------THGYEESVARLRAARDAGADVGFLEGI---------TSREMARQVIQDLAGWPLLLNMVEHGATPSISAAE 227 (302)
T ss_dssp HH-------HHCHHHHHHHHHHHHTTTCSEEEETTC---------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHH
T ss_pred cc-------cCCHHHHHHHHHHHHHcCCCEEeecCC---------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHH
Confidence 21 123788899999999999998876422 12345677777774 787664 22222 13445
Q ss_pred HHHcCCCcEEcccHHHH
Q 017733 310 AVAANYTDLVAFGRLFL 326 (367)
Q Consensus 310 ~L~~G~~D~V~~gR~~l 326 (367)
+-+-| +.+|..+-.++
T Consensus 228 L~~lG-v~~v~~~~~~~ 243 (302)
T 3fa4_A 228 AKEMG-FRIIIFPFAAL 243 (302)
T ss_dssp HHHHT-CSEEEETTTTH
T ss_pred HHHcC-CCEEEEchHHH
Confidence 55557 78888774443
No 373
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=94.32 E-value=0.2 Score=43.70 Aligned_cols=80 Identities=10% Similarity=0.086 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEE-EeCCC-CHHHHHHHHHcCCCcEEcccH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFI-AAGGY-SRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi-~~Ggi-t~~~a~~~L~~G~~D~V~~gR 323 (367)
+.++..+.++.+.+.|+++|++...+ +.....++.+++.++.+++ +.|.+ +.++++.+++.| +|+|.++.
T Consensus 17 d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~G-ad~V~~~~ 88 (212)
T 2v82_A 17 TPDEALAHVGAVIDAGFDAVEIPLNS-------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMG-CQLIVTPN 88 (212)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEETTS-------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTT-CCEEECSS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcC-CCEEEeCC
Confidence 35667888999999999999986442 1223456677777777744 44555 899999999999 99998764
Q ss_pred HHHhCCchHHHHH
Q 017733 324 LFLANPDLPKRFE 336 (367)
Q Consensus 324 ~~ladP~l~~k~~ 336 (367)
.++++.+..+
T Consensus 89 ---~~~~~~~~~~ 98 (212)
T 2v82_A 89 ---IHSEVIRRAV 98 (212)
T ss_dssp ---CCHHHHHHHH
T ss_pred ---CCHHHHHHHH
Confidence 3456655544
No 374
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=94.31 E-value=0.59 Score=42.35 Aligned_cols=73 Identities=12% Similarity=0.079 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC-cEEEeCCCCHH-----------HHHHHHHcCC
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG-TFIAAGGYSRD-----------EGNKAVAANY 315 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~-pvi~~Ggit~~-----------~a~~~L~~G~ 315 (367)
+....+++...++|++-+-++ + .-++.||+.++. -++.+.|+.++ ...++++.|
T Consensus 162 ~~V~~~A~~a~~aG~~GvV~s----------a---~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aG- 227 (255)
T 3ldv_A 162 DHVLRLATLTKNAGLDGVVCS----------A---QEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASG- 227 (255)
T ss_dssp HHHHHHHHHHHHTTCSEEECC----------H---HHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCEEEEC----------H---HHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcC-
Confidence 445667777677888766532 1 236678887753 45666666332 256788898
Q ss_pred CcEEcccHHHHhCCchHHH
Q 017733 316 TDLVAFGRLFLANPDLPKR 334 (367)
Q Consensus 316 ~D~V~~gR~~ladP~l~~k 334 (367)
+|++.+||+.+..+|-...
T Consensus 228 ad~iVvGr~I~~a~dp~~a 246 (255)
T 3ldv_A 228 SDYLVIGRPITQAAHPEVV 246 (255)
T ss_dssp CSEEEECHHHHTCSCHHHH
T ss_pred CCEEEECHHHhCCCCHHHH
Confidence 9999999999987765443
No 375
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=94.29 E-value=0.31 Score=45.02 Aligned_cols=142 Identities=8% Similarity=0.008 Sum_probs=84.3
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
..++|.++|++.|-|..+-- +..+ ..+.+-+.+.-.+.+.++++..|+.- - .+..-++..-...+ ..
T Consensus 84 ~i~~a~~~G~~~V~i~~~~S--------~~h~--~~~~~~~~~e~~~~~~~~v~~a~~~G-~-~V~~~l~~~~~~e~-~~ 150 (295)
T 1ydn_A 84 GYEAAAAAHADEIAVFISAS--------EGFS--KANINCTIAESIERLSPVIGAAINDG-L-AIRGYVSCVVECPY-DG 150 (295)
T ss_dssp HHHHHHHTTCSEEEEEEESC--------HHHH--HHHTSSCHHHHHHHHHHHHHHHHHTT-C-EEEEEEECSSEETT-TE
T ss_pred HHHHHHHCCCCEEEEEEecC--------HHHH--HHHcCCCHHHHHHHHHHHHHHHHHcC-C-eEEEEEEEEecCCc-CC
Confidence 34577889999998864331 1111 11223355666777788888887752 2 22212322100000 11
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeC----CCCHHHHHHHHHcCCCcE
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAG----GYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G----git~~~a~~~L~~G~~D~ 318 (367)
..+.+++.++++.+.+.|+|.|.+... .+. .........++.+++.++ +|+..=+ |+....+..+++.| ++.
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt-~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG-~~~ 227 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDT-IGR-GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKG-LRV 227 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEET-TSC-CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHT-CCE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCC-CCC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhC-CCE
Confidence 235688899999999999999988632 111 122224466788999887 6755433 33467788999999 666
Q ss_pred Ecc
Q 017733 319 VAF 321 (367)
Q Consensus 319 V~~ 321 (367)
|-.
T Consensus 228 vd~ 230 (295)
T 1ydn_A 228 FDA 230 (295)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 376
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=94.27 E-value=0.51 Score=44.68 Aligned_cols=128 Identities=16% Similarity=0.050 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
.+.+-+....++|.|||-+.+.-| |+- -|.+.|.+++.. .+-|..+|.+=++
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTG----------------E~~~Ls~eEr~~vi~~------~~~grvpViaGvg----- 100 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMG----------------DWPLLTDEQRMEGVER------LVKAGIPVIVGTG----- 100 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGG----------------TGGGSCHHHHHHHHHH------HHHTTCCEEEECC-----
T ss_pred HHHHHHHHHHHcCCCEEEeCccCc----------------ChhhCCHHHHHHHHHH------HhCCCCcEEEecC-----
Confidence 344444555679999999877554 222 244556555443 2224335555333
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH-hcCCcEEEe-----C-CCCHHHHHHH-
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR-AFEGTFIAA-----G-GYSRDEGNKA- 310 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~-~~~~pvi~~-----G-git~~~a~~~- 310 (367)
..+.++++++++..++.|+|.+-+..+.+..+.+......+.+.|.+ ++++||+.- | .++++...++
T Consensus 101 -----~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~ 175 (344)
T 2hmc_A 101 -----AVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALR 175 (344)
T ss_dssp -----CSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHH
Confidence 23567789999999999999998877765441223334456778888 788897653 3 3589988888
Q ss_pred HHcCCCcEEcc
Q 017733 311 VAANYTDLVAF 321 (367)
Q Consensus 311 L~~G~~D~V~~ 321 (367)
.+.. .+|++
T Consensus 176 a~~p--nIvGi 184 (344)
T 2hmc_A 176 AEHK--NLVGF 184 (344)
T ss_dssp HHCT--TEEEE
T ss_pred hcCC--CEEEE
Confidence 5543 35554
No 377
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.14 E-value=0.91 Score=41.99 Aligned_cols=141 Identities=12% Similarity=0.088 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC---chhhHhHHHHHHHHHHHHHh-CCc-ceEEEeC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG---SLENRCRFALEVVEAVVREI-GAE-RVGMRLS 233 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg---s~enr~r~~~eii~aiR~~v-g~~-~i~vrls 233 (367)
.+..+.+++..++|..||.|-.+.. .+|....|| .+.... ...+-|+++|++. +.+ .|.-|.-
T Consensus 94 ~~v~~~v~~l~~aGaagv~iED~~~-----------~k~cgH~gg~~k~l~p~~-e~~~rI~Aa~~a~~~~~~~i~aRtd 161 (295)
T 1s2w_A 94 NNARRLVRKLEDRGVAGACLEDKLF-----------PKTNSLHDGRAQPLADIE-EFALKIKACKDSQTDPDFCIVARVE 161 (295)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECBCC-------------------CTTCCBCCHH-HHHHHHHHHHHHCSSTTCEEEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEECCCCC-----------CccccccCCCCCcccCHH-HHHHHHHHHHHhcccCCcEEEEeeh
Confidence 3567778888899999999987641 455555554 122222 2345555555554 223 4555664
Q ss_pred CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCC-CCHHHHHHH
Q 017733 234 PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGG-YSRDEGNKA 310 (367)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Gg-it~~~a~~~ 310 (367)
.. . .....+++++=++.++++|+|.|-+..+ .+....++.+.+.++ +|++++-. +..-..+++
T Consensus 162 a~--~----a~~g~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL 227 (295)
T 1s2w_A 162 AF--I----AGWGLDEALKRAEAYRNAGADAILMHSK--------KADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHF 227 (295)
T ss_dssp TT--T----TTCCHHHHHHHHHHHHHTTCSEEEECCC--------SSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHH
T ss_pred HH--h----ccccHHHHHHHHHHHHHcCCCEEEEcCC--------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHH
Confidence 31 0 1123688888899999999998876421 112345677888877 89988733 211125667
Q ss_pred HHcCCCcEEcccHHHH
Q 017733 311 VAANYTDLVAFGRLFL 326 (367)
Q Consensus 311 L~~G~~D~V~~gR~~l 326 (367)
-+-| +.+|.++-.++
T Consensus 228 ~~lG-v~~v~~~~~~~ 242 (295)
T 1s2w_A 228 RDMG-VSMVIWANHNL 242 (295)
T ss_dssp HHHT-CCEEEECSHHH
T ss_pred HHcC-CcEEEEChHHH
Confidence 7778 88998876544
No 378
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.13 E-value=0.39 Score=43.91 Aligned_cols=103 Identities=17% Similarity=0.084 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceE--EEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVG--MRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~--vrls~~~ 236 (367)
++-.+.|.+..++|.++|.|-.+. -..+.|+++.++ | -||+ +.|.|-.
T Consensus 95 ~~a~~na~rl~kaGa~aVklEdg~----------------------------e~~~~I~al~~a-g-IpV~gHiGLtPQs 144 (275)
T 1o66_A 95 EQAFAAAAELMAAGAHMVKLEGGV----------------------------WMAETTEFLQMR-G-IPVCAHIGLTPQS 144 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSG----------------------------GGHHHHHHHHHT-T-CCEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCcEEEECCcH----------------------------HHHHHHHHHHHc-C-CCeEeeeccCcee
Confidence 345666677777999999997541 124455555443 2 1333 3334322
Q ss_pred c-----ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCC
Q 017733 237 E-----CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGG 301 (367)
Q Consensus 237 ~-----~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 301 (367)
. |.-.+..+..+++++-++.++++|+|.|-+... + ...++.|.+.+++|+|+.|.
T Consensus 145 ~~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 204 (275)
T 1o66_A 145 VFAFGGYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECV--------L--AELAKKVTETVSCPTIGIGA 204 (275)
T ss_dssp TTC-----------CHHHHHHHHHHHHHTTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred ecccCCeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEECC
Confidence 1 110011123467778888999999998876321 1 24678899999999888763
No 379
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=93.99 E-value=0.33 Score=44.72 Aligned_cols=88 Identities=8% Similarity=-0.048 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc
Q 017733 213 LEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF 292 (367)
Q Consensus 213 ~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~ 292 (367)
.+.++++|+..+..+|.|-.. +.+++.+. .++|+|+|-+...+ ...++.+.+.+
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~------------tl~ea~eA----l~aGaD~I~LDn~~----------~~~l~~av~~~ 239 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT------------NLDELNQA----IAAKADIVMLDNFS----------GEDIDIAVSIA 239 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES------------SHHHHHHH----HHTTCSEEEEESCC----------HHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEeC------------CHHHHHHH----HHcCCCEEEEcCCC----------HHHHHHHHHhh
Confidence 466777787643335665322 24444333 34799999876431 12233333333
Q ss_pred --CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 293 --EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 293 --~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
+.++.++||+|++.+.++.+.| +|+|++|.-...
T Consensus 240 ~~~v~ieaSGGIt~~~i~~~a~tG-VD~IsvGalt~s 275 (287)
T 3tqv_A 240 RGKVALEVSGNIDRNSIVAIAKTG-VDFISVGAITKH 275 (287)
T ss_dssp TTTCEEEEESSCCTTTHHHHHTTT-CSEEECSHHHHS
T ss_pred cCCceEEEECCCCHHHHHHHHHcC-CCEEEEChhhcC
Confidence 4679999999999999999998 999999875543
No 380
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.93 E-value=0.24 Score=47.35 Aligned_cols=66 Identities=15% Similarity=0.112 Sum_probs=47.6
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
+.++.+.++|+|+|++..... ......+.++.+++.+ ++||++....|+++++++++.| +|+|.+|
T Consensus 111 ~~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aG-AD~I~vG 177 (366)
T 4fo4_A 111 ERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG-VSAVKVG 177 (366)
T ss_dssp HHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcC-CCEEEEe
Confidence 467778889999998842211 1122345678899888 5677664445999999999999 9999883
No 381
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=93.91 E-value=0.27 Score=45.58 Aligned_cols=86 Identities=12% Similarity=0.009 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc
Q 017733 213 LEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF 292 (367)
Q Consensus 213 ~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~ 292 (367)
.+.+++.|+..+..+|.|... +.+++.+ ..++|+|.|-+...+ ...++.+.+.+
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd------------tlde~~e----Al~aGaD~I~LDn~~----------~~~l~~av~~i 250 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE------------TLDQLRT----ALAHGARSVLLDNFT----------LDMMRDAVRVT 250 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES------------SHHHHHH----HHHTTCEEEEEESCC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEeC------------CHHHHHH----HHHcCCCEEEECCCC----------HHHHHHHHHHh
Confidence 467788888876445555432 2444333 334799999876432 12222222222
Q ss_pred --CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHH
Q 017733 293 --EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 293 --~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
+.++.++||+|++...++.+.| +|++++|...
T Consensus 251 ~~~v~ieaSGGI~~~~i~~~a~tG-VD~isvG~lt 284 (298)
T 3gnn_A 251 EGRAVLEVSGGVNFDTVRAIAETG-VDRISIGALT 284 (298)
T ss_dssp TTSEEEEEESSCSTTTHHHHHHTT-CSEEECGGGG
T ss_pred CCCCeEEEEcCCCHHHHHHHHHcC-CCEEEECCee
Confidence 3569999999999999999999 8999999743
No 382
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=93.91 E-value=1 Score=41.79 Aligned_cols=152 Identities=15% Similarity=0.079 Sum_probs=87.8
Q ss_pred HHHHHHHHHhCCCEEEEec-ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHG-ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~-~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+-. +.+. . + -..|.--=+++. .+..+++|.+.+. .||.+.+--
T Consensus 39 ~~sA~l~e~aG~dai~vs~~s~a~--~--~-----G~pD~~~vt~~e----m~~~~~~I~r~~~-~pviaD~d~------ 98 (305)
T 3ih1_A 39 AMAALVARNTGFLALYLSGAAYTA--S--K-----GLPDLGIVTSTE----VAERARDLVRATD-LPVLVDIDT------ 98 (305)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH--H--H-----TCCSSSCSCHHH----HHHHHHHHHHHHC-CCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH--h--C-----CCCCCCcCCHHH----HHHHHHHHHHhcC-CCEEEECCC------
Confidence 4578888899999999865 2221 0 1 112211113332 3555566666663 377776532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cCCc--hhhHHHH---HHHHHhcCCcEEEeCCC---------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LTDK--SETQRSL---LSMRRAFEGTFIAAGGY--------- 302 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~~~--~~~~~~~---~~ir~~~~~pvi~~Ggi--------- 302 (367)
+.++ .+...+.++.++++|++.+++-...... ..++ .+..+.. +.++++ ..+++.+++-
T Consensus 99 -Gyg~-~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~ 175 (305)
T 3ih1_A 99 -GFGG-VLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLD 175 (305)
T ss_dssp -CSSS-HHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHH
T ss_pred -CCCC-HHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHH
Confidence 1122 4567788999999999999996543211 0111 1122334 444444 4554444443
Q ss_pred -CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCC
Q 017733 303 -SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNA 339 (367)
Q Consensus 303 -t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~ 339 (367)
..+.+..+.+.| +|.|.+ ..+.+++..+++.+.-
T Consensus 176 ~ai~Ra~ay~eAG-AD~i~~--e~~~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 176 EAIERANAYVKAG-ADAIFP--EALQSEEEFRLFNSKV 210 (305)
T ss_dssp HHHHHHHHHHHHT-CSEEEE--TTCCSHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcC-CCEEEE--cCCCCHHHHHHHHHHc
Confidence 134567788888 999988 3346778888887754
No 383
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=93.86 E-value=1.1 Score=40.87 Aligned_cols=154 Identities=14% Similarity=0.039 Sum_probs=89.3
Q ss_pred HHHHHHHHHhCCCEEEEec-ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHG-ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~-~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+ +.+. .+ -..|.-.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 26 ~~sA~~~~~aG~~ai~vsg~s~a~----~~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~pviaD~d~------ 85 (275)
T 2ze3_A 26 VASARLLEAAGFTAIGTTSAGIAH----AR-----GRTDGQTLTRD----EMGREVEAIVRAVA-IPVNADIEA------ 85 (275)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHH----HS-----CCCSSSSSCHH----HHHHHHHHHHHHCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH----hC-----CCCCCCCCCHH----HHHHHHHHHHhhcC-CCEEeecCC------
Confidence 5578888899999999763 2221 11 12221111222 34566666777664 377776632
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc---CCchhhHHHHHHHHHh---cCCcEEEeCCC-C----------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL---TDKSETQRSLLSMRRA---FEGTFIAAGGY-S---------- 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~---~~~~~~~~~~~~ir~~---~~~pvi~~Ggi-t---------- 303 (367)
+.+...+++.+.++.+.++|+..+++-....... .+.......++.++++ ..+|+..+++- .
T Consensus 86 -Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~ 164 (275)
T 2ze3_A 86 -GYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDE 164 (275)
T ss_dssp -CSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHH
T ss_pred -CCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccch
Confidence 2233567788889999999999999965542110 1111122233444443 25676665543 1
Q ss_pred ------HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCC
Q 017733 304 ------RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNA 339 (367)
Q Consensus 304 ------~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~ 339 (367)
.+.+..+.+.| +|+|.+ ..+.+++..+++.+.-
T Consensus 165 ~~~~~ai~Ra~ay~eAG-Ad~i~~--e~~~~~~~~~~i~~~~ 203 (275)
T 2ze3_A 165 ERLAETVRRGQAYADAG-ADGIFV--PLALQSQDIRALADAL 203 (275)
T ss_dssp HHHHHHHHHHHHHHHTT-CSEEEC--TTCCCHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHCC-CCEEEE--CCCCCHHHHHHHHHhc
Confidence 12355666778 999888 3356668888887753
No 384
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=93.85 E-value=0.23 Score=48.55 Aligned_cols=100 Identities=11% Similarity=0.150 Sum_probs=64.1
Q ss_pred HHH-HHHHHHHHhCC--c-ceEEEeCCCccccc------cCCC------ChHHHHH-HHHHHhhhcCccEEEEecCCccc
Q 017733 212 ALE-VVEAVVREIGA--E-RVGMRLSPYAECAE------AVDS------NPEALGL-YMAKALNKFKLLYLHVIEPRMIQ 274 (367)
Q Consensus 212 ~~e-ii~aiR~~vg~--~-~i~vrls~~~~~~~------~~~~------~~~~~~~-~l~~~L~~~Gvd~i~v~~~~~~~ 274 (367)
.++ ++++|| ++|+ + .|.+..+..+.|.. .... .+.++.. .+.+.+++.++.||+ +|.
T Consensus 224 ~l~~i~~Air-~~G~~g~v~l~vDan~~~~~~~~~~~y~~~~~~~~~~~~~a~~~~~~~~~~l~~y~i~~iE--dPl--- 297 (432)
T 2ptz_A 224 PLPILMEAIE-EAGHRGKFAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYPIVSIE--DPY--- 297 (432)
T ss_dssp HHHHHHHHHH-HTTCTTSCEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSCEEEEE--CCS---
T ss_pred HHHHHHHHHH-HhCCcCCcEEEEECcccccccccCceeEeeccccccCCCCHHHHHHHHHHHHHhCCceEEE--CCC---
Confidence 456 588999 7776 5 46676665432211 0001 0233332 334778889988887 442
Q ss_pred cCCchhhHHHHHHHHHhc--CCcEEEeCC-C--CHHHHHHHHHcCCCcEEcc
Q 017733 275 LTDKSETQRSLLSMRRAF--EGTFIAAGG-Y--SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 275 ~~~~~~~~~~~~~ir~~~--~~pvi~~Gg-i--t~~~a~~~L~~G~~D~V~~ 321 (367)
.+.+....+.+++.+ ++|| ++.. + +++++.++|+.+.+|+|.+
T Consensus 298 ---~~~D~~g~~~l~~~~g~~ipI-~gDe~~v~~~~~~~~~i~~~a~d~i~i 345 (432)
T 2ptz_A 298 ---DQDDFAGFAGITEALKGKTQI-VGDDLTVTNTERIKMAIEKKACNSLLL 345 (432)
T ss_dssp ---CTTCHHHHHHHHHHTTTTSEE-EESTTTTTCHHHHHHHHHTTCCSEEEE
T ss_pred ---CcchHHHHHHHHHhcCCCCeE-EecCcccCCHHHHHHHHHcCCCCEEEe
Confidence 223456677899988 7888 4444 2 6999999999999999876
No 385
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.75 E-value=1.4 Score=40.85 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=80.7
Q ss_pred CCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE---EeCCCccccc-c----CC
Q 017733 172 GFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM---RLSPYAECAE-A----VD 243 (367)
Q Consensus 172 GfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v---rls~~~~~~~-~----~~ 243 (367)
||+-|-+.+.+- +++...+.+.++++..++.- - .|-. ++...++... . ..
T Consensus 113 GFtSVMiDgS~~--------------------p~eENi~~Tk~vv~~ah~~g-v-sVEaElG~igG~Edgv~~~~~~~~~ 170 (306)
T 3pm6_A 113 GFDSIMVDMSHF--------------------SKEENLRLTRELVAYCNARG-I-ATEAEPGRIEGGEDGVQDTVDLEGV 170 (306)
T ss_dssp CCSEEEECCTTS--------------------CHHHHHHHHHHHHHHHHTTT-C-EEEECSSBCCCCBTTBCCCTTCCCB
T ss_pred CCCEEEEeCCCC--------------------CHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeccccCCcccccccccc
Confidence 888888877651 36777899999999888641 1 1111 1222222111 0 11
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCC---chhhHHHHHHHHHhc--CCcEEEeCC--CCHHHHHHHHHcCCC
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTD---KSETQRSLLSMRRAF--EGTFIAAGG--YSRDEGNKAVAANYT 316 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~---~~~~~~~~~~ir~~~--~~pvi~~Gg--it~~~a~~~L~~G~~ 316 (367)
..+++++.+|+ +.|+|+|-++-++....+. ..-..+.++.|++.+ ++|++.=|+ +..++..++++.| +
T Consensus 171 yT~Peea~~Fv----~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~G-V 245 (306)
T 3pm6_A 171 LTTPEESEEFV----ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERG-V 245 (306)
T ss_dssp CCCHHHHHHHH----TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTT-E
T ss_pred CCCHHHHHHHH----HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcC-C
Confidence 23567777776 3899999887777654442 122456788999998 689776665 5788999999999 3
Q ss_pred cEEcccHHH
Q 017733 317 DLVAFGRLF 325 (367)
Q Consensus 317 D~V~~gR~~ 325 (367)
-=|=++..+
T Consensus 246 ~KiNi~Tdl 254 (306)
T 3pm6_A 246 AKVNVNRAV 254 (306)
T ss_dssp EEEEESHHH
T ss_pred eEEEeChHH
Confidence 345454443
No 386
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.73 E-value=0.58 Score=42.98 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=74.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce
Q 017733 149 LSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 149 mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i 228 (367)
-|.+|++.+.++ +..++++|+|||-+.+ |.+ +..-| .+.++.+-+..+. +
T Consensus 105 Ys~~E~~~M~~d----I~~~~~~GAdGvVfG~---------L~~--dg~iD-------------~~~~~~Li~~a~~--l 154 (287)
T 3iwp_A 105 YSDREIEVMKAD----IRLAKLYGADGLVFGA---------LTE--DGHID-------------KELCMSLMAICRP--L 154 (287)
T ss_dssp CCHHHHHHHHHH----HHHHHHTTCSEEEECC---------BCT--TSCBC-------------HHHHHHHHHHHTT--S
T ss_pred cCHHHHHHHHHH----HHHHHHcCCCEEEEee---------eCC--CCCcC-------------HHHHHHHHHHcCC--C
Confidence 578888877766 4566779999999864 211 11122 2233333334432 3
Q ss_pred EEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC--CcEEEeCCCCHHH
Q 017733 229 GMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE--GTFIAAGGYSRDE 306 (367)
Q Consensus 229 ~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~--~pvi~~Ggit~~~ 306 (367)
.+-++.- |+.+ .++. ...+.|.++|++-|=.+.... .-......++.+.+..+ ++|++.||++++.
T Consensus 155 ~vTFHRA--FD~~--~d~~----~Ale~Li~lGvdrILTSG~~~----~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~N 222 (287)
T 3iwp_A 155 PVTFHRA--FDMV--HDPM----AALETLLTLGFERVLTSGCDS----SALEGLPLIKRLIEQAKGRIVVMPGGGITDRN 222 (287)
T ss_dssp CEEECGG--GGGC--SCHH----HHHHHHHHHTCSEEEECTTSS----STTTTHHHHHHHHHHHTTSSEEEECTTCCTTT
T ss_pred cEEEECc--hhcc--CCHH----HHHHHHHHcCCCEEECCCCCC----ChHHhHHHHHHHHHHhCCCCEEEECCCcCHHH
Confidence 4444431 2111 1222 345566677999886654311 11234455666665543 6799999999999
Q ss_pred HHHHHH-cCCCcEE
Q 017733 307 GNKAVA-ANYTDLV 319 (367)
Q Consensus 307 a~~~L~-~G~~D~V 319 (367)
+.++++ .| ++-+
T Consensus 223 i~~l~~~tG-~~~~ 235 (287)
T 3iwp_A 223 LQRILEGSG-ATEF 235 (287)
T ss_dssp HHHHHHHHC-CSEE
T ss_pred HHHHHHhhC-CCEE
Confidence 999988 66 5544
No 387
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=93.64 E-value=0.13 Score=44.39 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=48.5
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhCCc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLANPD 330 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~ladP~ 330 (367)
.-++.++....|++++-.+ +...+.++.+ ++.|+|++|.+ |+|++++ +++| +|.|+.+..-+++-.
T Consensus 119 ~~~~~I~~~kPD~iEiLPg--------~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l~aG-A~aIsTs~~~LW~~~ 185 (188)
T 1vkf_A 119 RGIEQIETLGVDVVEVLPG--------AVAPKVARKI---PGRTVIAAGLVETEEEARE-ILKH-VSAISTSSRILWKMK 185 (188)
T ss_dssp HHHHHHHHHTCSEEEEESG--------GGHHHHHTTS---TTSEEEEESCCCSHHHHHH-HTTT-SSEEEECCHHHHTC-
T ss_pred hhhhhccccCCCeEeecCC--------CchHHHHHHh---cCCCEEEECCcCCHHHHHH-HHCC-CeEEEeCCHHHhCCc
Confidence 4455566677888887511 1123444445 68899999999 8999999 9999 999999988887643
No 388
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.61 E-value=4.2 Score=37.08 Aligned_cols=160 Identities=11% Similarity=0.034 Sum_probs=90.3
Q ss_pred CCCChHHHHHHHHH---------H-HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHH
Q 017733 147 RPLSIEEIPKIVND---------F-RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVV 216 (367)
Q Consensus 147 ~~mt~~eI~~ii~~---------f-~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii 216 (367)
+.+|..++.++.+. | +-.|+.+.++|||.| +-+.. |-...+ -..|.-.=+ +.-.+..+
T Consensus 14 ~~~t~~~lr~~~~~g~~i~m~tayDa~sA~l~e~aG~d~i-lvGdS--l~~~~l-----G~~dt~~vt----ldem~~h~ 81 (275)
T 3vav_A 14 PAVTVPKLQAMREAGEKIAMLTCYDASFAALLDRANVDVQ-LIGDS--LGNVLQ-----GQTTTLPVT----LDDIAYHT 81 (275)
T ss_dssp CCCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEE-EECTT--HHHHTT-----CCSSSTTCC----HHHHHHHH
T ss_pred CCcCHHHHHHHHHCCCcEEEEeCcCHHHHHHHHHcCCCEE-EECcH--HHHHHc-----CCCCCCccC----HHHHHHHH
Confidence 45788888887764 1 567888899999999 44422 111111 111211112 22345666
Q ss_pred HHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcE
Q 017733 217 EAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTF 296 (367)
Q Consensus 217 ~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pv 296 (367)
++|++.++.-+|.+.+-- +.+.+.+++.+-+.+|.+.|++.+++-.+. .....++.+.++ .+||
T Consensus 82 ~aV~r~~~~~~vvaD~pf-------gsY~s~~~a~~~a~rl~kaGa~aVklEdg~--------~~~~~i~~l~~~-GIpv 145 (275)
T 3vav_A 82 ACVARAQPRALIVADLPF-------GTYGTPADAFASAVKLMRAGAQMVKFEGGE--------WLAETVRFLVER-AVPV 145 (275)
T ss_dssp HHHHHTCCSSEEEEECCT-------TSCSSHHHHHHHHHHHHHTTCSEEEEECCG--------GGHHHHHHHHHT-TCCE
T ss_pred HHHHhcCCCCCEEEecCC-------CCCCCHHHHHHHHHHHHHcCCCEEEECCch--------hHHHHHHHHHHC-CCCE
Confidence 777776653367766521 112456777777888888899999985441 123445555543 5687
Q ss_pred EEe-----------CCC-----CH-------HHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 297 IAA-----------GGY-----SR-------DEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 297 i~~-----------Ggi-----t~-------~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
++- |++ |. ++|..+.+.| +|+|.+ ..+-++ +.+++.+.
T Consensus 146 ~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAG-A~~ivl--E~vp~~-~a~~It~~ 206 (275)
T 3vav_A 146 CAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEAG-AQLIVL--EAVPTL-VAAEVTRE 206 (275)
T ss_dssp EEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHHT-CSEEEE--ESCCHH-HHHHHHHH
T ss_pred EEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHcC-CCEEEe--cCCCHH-HHHHHHHh
Confidence 752 332 32 3345555677 887766 222232 56666554
No 389
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=93.46 E-value=0.58 Score=43.25 Aligned_cols=104 Identities=7% Similarity=0.024 Sum_probs=65.3
Q ss_pred cccCCCCCCCc--hhhHhHH---HHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEe
Q 017733 194 VNDRTDEYGGS--LENRCRF---ALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVI 268 (367)
Q Consensus 194 ~N~R~D~yGgs--~enr~r~---~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~ 268 (367)
.|+|-+-|-+- .+|=..+ +.+.|+++|+..+..+|.|-.. +.+++.+. .++|+|.|-+.
T Consensus 171 ~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~~p~~kIeVEv~------------tl~e~~eA----l~aGaDiImLD 234 (300)
T 3l0g_A 171 ESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKNLKNEYIAIECD------------NISQVEES----LSNNVDMILLD 234 (300)
T ss_dssp BCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHHSSSCCEEEEES------------SHHHHHHH----HHTTCSEEEEE
T ss_pred cccccCCcceEEEcHhHHHHhCCHHHHHHHHHHhCCCCCEEEEEC------------CHHHHHHH----HHcCCCEEEEC
Confidence 57777666553 2343333 3567788888776435555332 24444333 34699988875
Q ss_pred cCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHHHHHHHHHcCCCcEEcccHH
Q 017733 269 EPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRDEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~ 324 (367)
..+ ...++.+.+.+ +..+-++||+|++.+.++.+.| +|+|++|.-
T Consensus 235 n~s----------~~~l~~av~~~~~~v~leaSGGIt~~~i~~~A~tG-VD~IsvGal 281 (300)
T 3l0g_A 235 NMS----------ISEIKKAVDIVNGKSVLEVSGCVNIRNVRNIALTG-VDYISIGCI 281 (300)
T ss_dssp SCC----------HHHHHHHHHHHTTSSEEEEESSCCTTTHHHHHTTT-CSEEECGGG
T ss_pred CCC----------HHHHHHHHHhhcCceEEEEECCCCHHHHHHHHHcC-CCEEEeCcc
Confidence 331 12222222222 4579999999999999999998 999999854
No 390
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=93.44 E-value=1.1 Score=39.24 Aligned_cols=93 Identities=6% Similarity=0.039 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHH
Q 017733 210 RFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMR 289 (367)
Q Consensus 210 r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir 289 (367)
.+..++|+++|+..+..++.+.+... ..+ + .+++.+.++|+|++.+|.-.. ........+.++
T Consensus 44 ~~G~~~i~~lr~~~~~~~i~ld~~l~--------d~p-~---~~~~~~~~aGad~i~vh~~~~-----~~~~~~~~~~~~ 106 (218)
T 3jr2_A 44 AEGMKAVSTLRHNHPNHILVCDMKTT--------DGG-A---ILSRMAFEAGADWITVSAAAH-----IATIAACKKVAD 106 (218)
T ss_dssp HHTTHHHHHHHHHCTTSEEEEEEEEC--------SCH-H---HHHHHHHHHTCSEEEEETTSC-----HHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHhCCCCcEEEEEeec--------ccH-H---HHHHHHHhcCCCEEEEecCCC-----HHHHHHHHHHHH
Confidence 34578999999996544444333321 112 2 256778889999999874311 111123444555
Q ss_pred HhcCCcEE--EeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 290 RAFEGTFI--AAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 290 ~~~~~pvi--~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
+. ...++ ..|-.|+++++++.+.| +|++.+
T Consensus 107 ~~-g~~~~~d~l~~~T~~~~~~~~~~g-~d~v~~ 138 (218)
T 3jr2_A 107 EL-NGEIQIEIYGNWTMQDAKAWVDLG-ITQAIY 138 (218)
T ss_dssp HH-TCEEEEECCSSCCHHHHHHHHHTT-CCEEEE
T ss_pred Hh-CCccceeeeecCCHHHHHHHHHcC-ccceee
Confidence 54 45443 33445888899988887 897755
No 391
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=93.43 E-value=0.37 Score=43.02 Aligned_cols=107 Identities=14% Similarity=0.067 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRR 290 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~ 290 (367)
.+..+++.++..-+ -.+.++--+.+.+ ...++..++++..++.|+..|.+. ....++.+|+
T Consensus 6 ~~~~~~~~~~~~~~-livscq~~~~~pl------~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~~ir~ 66 (232)
T 3igs_A 6 LLEQLDKNIAASGG-LIVSCQPVPGSPL------DKPEIVAAMALAAEQAGAVAVRIE------------GIDNLRMTRS 66 (232)
T ss_dssp HHHHHHHHHHHHCC-EEEECCCCTTCTT------CSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHHHHHT
T ss_pred HHHHHHHHhhhcCC-EEEEEeCCCCCCC------CCcchHHHHHHHHHHCCCeEEEEC------------CHHHHHHHHH
Confidence 44555555533322 2455544443211 124567889999999999988752 2456899999
Q ss_pred hcCCcEEEe-----CC---C---CHHHHHHHHHcCCCcEEcccHHHHhCCc----hHHHHHh
Q 017733 291 AFEGTFIAA-----GG---Y---SRDEGNKAVAANYTDLVAFGRLFLANPD----LPKRFEL 337 (367)
Q Consensus 291 ~~~~pvi~~-----Gg---i---t~~~a~~~L~~G~~D~V~~gR~~ladP~----l~~k~~~ 337 (367)
.+++||++. ++ + +.++++++++.| +|+|.+.-....+|+ +.+++++
T Consensus 67 ~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~G-ad~V~l~~~~~~~p~~l~~~i~~~~~ 127 (232)
T 3igs_A 67 LVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAG-AAIIAVDGTARQRPVAVEALLARIHH 127 (232)
T ss_dssp TCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred hcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcC-CCEEEECccccCCHHHHHHHHHHHHH
Confidence 999998752 22 2 357899999999 999998777666775 5555554
No 392
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=93.40 E-value=2.7 Score=40.95 Aligned_cols=154 Identities=10% Similarity=0.041 Sum_probs=73.1
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcc-cccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQ-VNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~-~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
.+.++.+++|||.-|-|.+.+. |. -|.+... --..+|++-+.++.++.+..+|...++.=+..++...+
T Consensus 114 ~e~i~~aI~AGFtSVMiD~S~~--------p~eeNi~lt~--evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpG 183 (450)
T 3txv_A 114 EAMITAYAKAGFTKLHLDTSMG--------CAGEPTALPD--ATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPG 183 (450)
T ss_dssp HHHHHHHHTTTCCEEEECCCBC--------CSSSCSBCCH--HHHHHHHHHHHHHHHHTC------CCEEEEECC-----
T ss_pred HHHHHHHHHcCCCEEEECCCCC--------chhhccchhH--HHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCC
Confidence 4455666778888888877662 11 1111100 01223444444444444334443333333333211111
Q ss_pred -------cCCCChHHHHHHHHHH----hhhcCcc-------EEEEecCCccc-cCCchhhHHHHHHHHHhc-CCc-EEE-
Q 017733 241 -------AVDSNPEALGLYMAKA----LNKFKLL-------YLHVIEPRMIQ-LTDKSETQRSLLSMRRAF-EGT-FIA- 298 (367)
Q Consensus 241 -------~~~~~~~~~~~~l~~~----L~~~Gvd-------~i~v~~~~~~~-~~~~~~~~~~~~~ir~~~-~~p-vi~- 298 (367)
.....+++++.++++. +.+.|+| .+-+.-+.-.. ......+.+.++.|++.+ +.| ++.
T Consensus 184 Ga~~~~~~~~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlh 263 (450)
T 3txv_A 184 GALEELDTLEVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFE 263 (450)
T ss_dssp --------CCCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEE
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEe
Confidence 0112356667777654 5566776 44332222111 101111234577788888 667 554
Q ss_pred eCC--C-CHHHHHHHHHcCCCcEEcccHHHH
Q 017733 299 AGG--Y-SRDEGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 299 ~Gg--i-t~~~a~~~L~~G~~D~V~~gR~~l 326 (367)
+|. . +.+...++++.| +-.+=+|-.+.
T Consensus 264 ghStDy~~~e~l~~~V~~G-iaklNVgp~Lt 293 (450)
T 3txv_A 264 AHSTDYQTPDALRELVADG-FAILKVGPGLT 293 (450)
T ss_dssp ESCCTTCCHHHHHHHHHTT-EEEEEECHHHH
T ss_pred cCCCCCCCHHHHHHHHHcC-CcEEEEChHHH
Confidence 333 4 788889999999 66666665543
No 393
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=93.37 E-value=2.3 Score=40.69 Aligned_cols=133 Identities=17% Similarity=0.157 Sum_probs=81.6
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSN 245 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~ 245 (367)
++|.++|.|.|.|..+- | .-++. +++-+.+.-.+.+.+.++.+|+.-+ .+-|+++..+.+ ..
T Consensus 81 ~~a~~~g~~~v~i~~~~--------s--~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~--~~~v~~~~ed~~-----~~ 142 (382)
T 2ztj_A 81 KVAVETGVQGIDLLFGT--------S--KYLRA-PHGRDIPRIIEEAKEVIAYIREAAP--HVEVRFSAEDTF-----RS 142 (382)
T ss_dssp HHHHHTTCSEEEEEECC-------------------CCCHHHHHHHHHHHHHHHHHHCT--TSEEEEEETTTT-----TS
T ss_pred HHHHHcCCCEEEEEecc--------C--HHHHH-HhCCCHHHHHHHHHHHHHHHHHcCC--CEEEEEEEEeCC-----CC
Confidence 56678999998875543 2 23455 7777777666778888888888742 245666653211 23
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh--cCCcEEEeC----CCCHHHHHHHHHcCCCcEE
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA--FEGTFIAAG----GYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~--~~~pvi~~G----git~~~a~~~L~~G~~D~V 319 (367)
+.+...++++.+.+. ++.|.+..-. + ...+......++.+++. .++|+-.=. |.....+..+++.| +|.|
T Consensus 143 ~~~~~~~~~~~~~~~-a~~i~l~DT~-G-~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aG-a~~v 218 (382)
T 2ztj_A 143 EEQDLLAVYEAVAPY-VDRVGLADTV-G-VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAG-ATHV 218 (382)
T ss_dssp CHHHHHHHHHHHGGG-CSEEEEEETT-S-CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred CHHHHHHHHHHHHHh-cCEEEecCCC-C-CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhC-CCEE
Confidence 567889999999999 9998874321 1 11112234567788887 455543221 22367788999999 7765
Q ss_pred c
Q 017733 320 A 320 (367)
Q Consensus 320 ~ 320 (367)
-
T Consensus 219 d 219 (382)
T 2ztj_A 219 D 219 (382)
T ss_dssp E
T ss_pred E
Confidence 4
No 394
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=93.32 E-value=0.56 Score=41.70 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHH
Q 017733 209 CRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSM 288 (367)
Q Consensus 209 ~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~i 288 (367)
+-.+.++++.+...- .-.+.++--+.+.+ ...+...++++..++.|+..|.+. ....++.+
T Consensus 4 ~~~~~~~~~~~~~~~-~livscq~~~~~pl------~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~~i 64 (229)
T 3q58_A 4 MSLLARLEQSVHENG-GLIVSCQPVPGSPM------DKPEIVAAMAQAAASAGAVAVRIE------------GIENLRTV 64 (229)
T ss_dssp HHHHHHHHHHHHHHC-CEEEECCCCTTSTT------CSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHHHH
T ss_pred HHHHHHHHHHhhhcC-CEEEEEeCCCCCCC------CCcchHHHHHHHHHHCCCcEEEEC------------CHHHHHHH
Confidence 334455555553332 22455554442211 134567889999999999988762 23568899
Q ss_pred HHhcCCcEEEeC-----C---C-C--HHHHHHHHHcCCCcEEcccHHHHhCCc----hHHHHHh
Q 017733 289 RRAFEGTFIAAG-----G---Y-S--RDEGNKAVAANYTDLVAFGRLFLANPD----LPKRFEL 337 (367)
Q Consensus 289 r~~~~~pvi~~G-----g---i-t--~~~a~~~L~~G~~D~V~~gR~~ladP~----l~~k~~~ 337 (367)
|+.+++||++.- + + + .++++++++.| +|+|.+.-....+|+ +.+++++
T Consensus 65 r~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aG-ad~I~l~~~~~~~p~~l~~~i~~~~~ 127 (229)
T 3q58_A 65 RPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAG-ADIIAFDASFRSRPVDIDSLLTRIRL 127 (229)
T ss_dssp GGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHT-CSEEEEECCSSCCSSCHHHHHHHHHH
T ss_pred HHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcC-CCEEEECccccCChHHHHHHHHHHHH
Confidence 999999988532 1 2 3 56899999999 999988766656774 5566655
No 395
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=93.32 E-value=0.47 Score=54.79 Aligned_cols=92 Identities=14% Similarity=0.071 Sum_probs=62.4
Q ss_pred HHHHHHHHhhhcCccEE---EEecCCccccCC-c---hhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHH---------
Q 017733 249 LGLYMAKALNKFKLLYL---HVIEPRMIQLTD-K---SETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAV--------- 311 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i---~v~~~~~~~~~~-~---~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L--------- 311 (367)
.+...+...+++|+|++ .+.+.......+ . ......+..|++.+++|||+.||| +.+....+|
T Consensus 711 ~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~~~~g 790 (2051)
T 2uv8_G 711 DAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWSTKFD 790 (2051)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGGGTTT
T ss_pred HHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccccccC
Confidence 34556667778888883 332222221111 1 112234677888899999999999 999999999
Q ss_pred --HcCCCcEEcccHHHHhCC------chHHHHHhCCCC
Q 017733 312 --AANYTDLVAFGRLFLANP------DLPKRFELNAPL 341 (367)
Q Consensus 312 --~~G~~D~V~~gR~~ladP------~l~~k~~~g~~~ 341 (367)
.-| +|.|.||.-+++-. .+-+.+.+....
T Consensus 791 ~~~lg-adGv~~GTrf~~t~Ea~~~~~~K~~iv~a~~~ 827 (2051)
T 2uv8_G 791 YPPMP-FDGFLFGSRVMIAKEVKTSPDAKKCIAACTGV 827 (2051)
T ss_dssp CCCCC-CSCEECSGGGTTSTTSCCCHHHHHHHHTCCCC
T ss_pred ccCCC-CceeeechHHHhCcccccCHHHHHHHHhCCCC
Confidence 788 99999999999754 455566654333
No 396
>4gfi_A Mandelate racemase/muconate lactonizing enzyme FA protein; putative L-Ala-L/D-Glu epimerase; HET: GLU; 1.90A {Agrobacterium tumefaciens}
Probab=93.22 E-value=0.083 Score=49.69 Aligned_cols=61 Identities=18% Similarity=0.141 Sum_probs=43.8
Q ss_pred HHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccccccCCCChH
Q 017733 169 IEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAECAEAVDSNPE 247 (367)
Q Consensus 169 ~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~~~~~~~~~~ 247 (367)
...||..+++..+. ..| .+.++++|+. +++ .|.|..|. ..+.
T Consensus 142 ~~~~~~~~Kik~g~--------------~~d-------------~~~v~~vr~~-g~d~~l~vDaN~---------~w~~ 184 (329)
T 4gfi_A 142 ENAGRPLLKIKTGT--------------ADD-------------EARLRAVRAA-APEARIIIDANE---------GWND 184 (329)
T ss_dssp HTTTSSEEEEECCS--------------SCC-------------HHHHHHHHHH-CTTSEEEEECTT---------CCCT
T ss_pred hhccccEEEecCCc--------------ccH-------------HHHHHHHHHh-ccCCeEEEEcCC---------CCCH
Confidence 45799999988653 122 5677888876 555 56665554 2345
Q ss_pred HHHHHHHHHhhhcCccEEE
Q 017733 248 ALGLYMAKALNKFKLLYLH 266 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~ 266 (367)
+++.++++.|++.++.|++
T Consensus 185 ~~A~~~~~~l~~~~i~~iE 203 (329)
T 4gfi_A 185 DNIEYYLKLAAELKISLIE 203 (329)
T ss_dssp TTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhhhcCceEEE
Confidence 6788999999999999988
No 397
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.12 E-value=0.88 Score=42.89 Aligned_cols=138 Identities=11% Similarity=0.042 Sum_probs=82.4
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
..++|.++|.|.|.|..+-- + .+.+...+-+.++-.+.+.++++.+|+.- . -|+++..+ +... .
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s--------~--~~~~~~~~~s~~e~l~~~~~~v~~ak~~G-~---~v~~~~~~-~~~~-~ 164 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGS--------L--HHLEKQLGKTPKEFFTDVSFVIEYAIKSG-L---KINVYLED-WSNG-F 164 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECS--------H--HHHHHHTCCCHHHHHHHHHHHHHHHHHTT-C---EEEEEEET-HHHH-H
T ss_pred hHHHHHHCCCCEEEEEEecC--------H--HHHHHHhCCCHHHHHHHHHHHHHHHHHCC-C---EEEEEEEE-CCCC-C
Confidence 35667789999999866431 1 12223344466666667777777777752 2 34444421 1100 1
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeC----CCCHHHHHHHHHcCCCcE
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAG----GYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~G----git~~~a~~~L~~G~~D~ 318 (367)
..+.+...++++.+.+.|++.|.+..-. + ...+......++.+++.+ ++|+-.=. |.....+..+++.| +|.
T Consensus 165 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G-~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aG-a~~ 241 (337)
T 3ble_A 165 RNSPDYVKSLVEHLSKEHIERIFLPDTL-G-VLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAG-VKG 241 (337)
T ss_dssp HHCHHHHHHHHHHHHTSCCSEEEEECTT-C-CCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTT-CSE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC-C-CcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhC-CCE
Confidence 1235778899999999999999875321 1 111222345678899888 45643322 22367788999998 776
Q ss_pred Ec
Q 017733 319 VA 320 (367)
Q Consensus 319 V~ 320 (367)
|-
T Consensus 242 vd 243 (337)
T 3ble_A 242 LH 243 (337)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 398
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.09 E-value=0.39 Score=43.70 Aligned_cols=103 Identities=18% Similarity=0.128 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceE--EEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVG--MRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~--vrls~~~ 236 (367)
++-.+.|.+..++|.++|.|-.+. -..+.|+++.++ | .||+ +-|.|-.
T Consensus 94 ~~a~~~a~rl~kaGa~aVklEgg~----------------------------e~~~~I~al~~a-g-ipV~gHiGLtPq~ 143 (264)
T 1m3u_A 94 EQAFENAATVMRAGANMVKIEGGE----------------------------WLVETVQMLTER-A-VPVCGHLGLTPQS 143 (264)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCSG----------------------------GGHHHHHHHHHT-T-CCEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECCcH----------------------------HHHHHHHHHHHC-C-CCeEeeecCCcee
Confidence 345666777777999999986531 124445555443 2 1333 2233321
Q ss_pred c-----ccccCCC-ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCC
Q 017733 237 E-----CAEAVDS-NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGG 301 (367)
Q Consensus 237 ~-----~~~~~~~-~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 301 (367)
. |.-.+.. ...+++++-++.++++|++.|-+..- + ...++.|.+.+++|+|+.|.
T Consensus 144 v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 204 (264)
T 1m3u_A 144 VNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQLLVLECV--------P--VELAKRITEALAIPVIGIGA 204 (264)
T ss_dssp HHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred ecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeCC
Confidence 1 1111111 12356677788899999998876321 1 24678899999999888763
No 399
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.06 E-value=4.4 Score=35.77 Aligned_cols=53 Identities=17% Similarity=0.097 Sum_probs=38.8
Q ss_pred HHHHHHHhc-CCcEEEeCCCC-HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 284 SLLSMRRAF-EGTFIAAGGYS-RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 284 ~~~~ir~~~-~~pvi~~Ggit-~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
..+.+|+.. +++++..|+++ .++.+.+.+.| +|.+.+|.+++.-+++...+++
T Consensus 166 ~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~~-vDG~LVG~a~l~a~~~~~~i~~ 220 (225)
T 1hg3_A 166 TVELVKKVNPEVKVLCGAGISTGEDVKKAIELG-TVGVLLASGVTKAKDPEKAIWD 220 (225)
T ss_dssp HHHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEESHHHHTCSSHHHHHHH
T ss_pred HHHHHHhccCCCEEEEeCCCCcHHHHHHHHhCC-CCEEEeCHHHHCCcCHHHHHHH
Confidence 344555544 36788889995 55666666665 9999999999998888776653
No 400
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=92.98 E-value=0.41 Score=43.95 Aligned_cols=45 Identities=7% Similarity=-0.051 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCC
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGG 301 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Gg 301 (367)
.+++++=++.++++|+|.|-+..- + ...++.|.+.+++|+|+.|.
T Consensus 178 a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIGa 222 (281)
T 1oy0_A 178 AEQTIADAIAVAEAGAFAVVMEMV--------P--AELATQITGKLTIPTVGIGA 222 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeCC
Confidence 466777788899999998876321 1 24678899999999888763
No 401
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=92.94 E-value=6.4 Score=37.28 Aligned_cols=140 Identities=12% Similarity=0.015 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEE
Q 017733 152 EEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMR 231 (367)
Q Consensus 152 ~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vr 231 (367)
+.|+.+++.-.+..+.+.++||.-|-|.+.+ -++|...+.+.++++..++.- -.|-.-
T Consensus 117 ~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~--------------------~p~eENI~~Tkevv~~ah~~g--vsVEaE 174 (358)
T 1dos_A 117 PWIDGLLDAGEKHFAATGKPLFSSHMIDLSE--------------------ESLQENIEICSKYLERMSKIG--MTLEIE 174 (358)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCSEEEECCTT--------------------SCHHHHHHHHHHHHHHHHHTT--CEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCCCceEeecCCC--------------------CCHHHHHHHHHHHHHHHHHcC--CEEEEE
Confidence 4455555554444445556779999998765 246778999999999888752 122222
Q ss_pred e---CCCcccccc------CCCChHHHHHHHHHHhhhcCcc---EEEEecCCccccCC-chh--hHHHHHHHHHh-----
Q 017733 232 L---SPYAECAEA------VDSNPEALGLYMAKALNKFKLL---YLHVIEPRMIQLTD-KSE--TQRSLLSMRRA----- 291 (367)
Q Consensus 232 l---s~~~~~~~~------~~~~~~~~~~~l~~~L~~~Gvd---~i~v~~~~~~~~~~-~~~--~~~~~~~ir~~----- 291 (367)
| ...++..+. .-...++++.++++.+ .||| .|-++-++.+..+. ..+ ..+.++.+++.
T Consensus 175 LG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~t--tgvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~ 252 (358)
T 1dos_A 175 LGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTEL--SKISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKH 252 (358)
T ss_dssp CCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHH--HTTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHH
T ss_pred eccccCcCCCccccccccccccCCHHHHHHHHHHh--cCCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHh
Confidence 2 222221100 1124577788887654 3566 88887777655442 111 23456666664
Q ss_pred ----cCCcEEEeC--CCCHHHHHHHHHcCC
Q 017733 292 ----FEGTFIAAG--GYSRDEGNKAVAANY 315 (367)
Q Consensus 292 ----~~~pvi~~G--git~~~a~~~L~~G~ 315 (367)
+++|++.=| |++.++..++++.|.
T Consensus 253 g~~~~~vpLVlHGgSG~~~e~i~~ai~~GV 282 (358)
T 1dos_A 253 NLPHNSLNFVFHGGSGSTAQEIKDSVSYGV 282 (358)
T ss_dssp TCCTTCSCEEECSCTTCCHHHHHHHHHTTE
T ss_pred CCCCCCCcEEEeCCCCCCHHHHHHHHHCCC
Confidence 568877666 468899999999993
No 402
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.89 E-value=0.29 Score=42.35 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCC-CHHHHHHHHHcCCCcEEcccH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGY-SRDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR 323 (367)
+.+++..+++.+.+.|+++++++... +.....++.+|+.++ ..+++.|.. ++++++.+++.| +|+| ++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~-------~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~G-ad~i-v~~ 90 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTV-------PDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESG-AEFI-VSP 90 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHT-CSEE-ECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcC-CCEE-EcC
Confidence 35778899999999999999987442 112345777888764 234555554 899999999998 9999 654
Q ss_pred H
Q 017733 324 L 324 (367)
Q Consensus 324 ~ 324 (367)
.
T Consensus 91 ~ 91 (205)
T 1wa3_A 91 H 91 (205)
T ss_dssp S
T ss_pred C
Confidence 3
No 403
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.71 E-value=1.6 Score=41.08 Aligned_cols=130 Identities=12% Similarity=0.081 Sum_probs=78.9
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
.++|.++|.|+|-|.... |. .+...++++.+|+. |-. +..+..+ ...
T Consensus 99 i~~a~~aGvd~v~I~~~~------------s~------------~~~~~~~i~~ak~~-G~~---v~~~~~~-----a~~ 145 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHC------------TE------------ADVSKQHIEYARNL-GMD---TVGFLMM-----SHM 145 (345)
T ss_dssp HHHHHHHTCCEEEEEEET------------TC------------GGGGHHHHHHHHHH-TCE---EEEEEES-----TTS
T ss_pred HHHHHhCCcCEEEEEEec------------cH------------HHHHHHHHHHHHHC-CCE---EEEEEEe-----CCC
Confidence 456667899999885422 11 12346777777775 322 2222211 012
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeC----CCCHHHHHHHHHcCCCcE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAG----GYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G----git~~~a~~~L~~G~~D~ 318 (367)
.+.+...++++.+.+.|++.|.+..-. +. .........++.+++.+ ++||-.=. |+....+..+++.| +|.
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~-G~-~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG-a~~ 222 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSG-GA-MSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG-CDR 222 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTT-CC-CCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT-CCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCc-Cc-cCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC-CCE
Confidence 356778999999999999998875332 11 11222446788899998 56654422 33467888999999 554
Q ss_pred -----EcccHHHHhCCch
Q 017733 319 -----VAFGRLFLANPDL 331 (367)
Q Consensus 319 -----V~~gR~~ladP~l 331 (367)
.++|.. ..|+.+
T Consensus 223 vd~tv~GlG~~-aGN~~l 239 (345)
T 1nvm_A 223 VDASLAGMGAG-AGNAPL 239 (345)
T ss_dssp EEEBGGGCSST-TCBCBH
T ss_pred EEecchhccCC-ccCcCH
Confidence 455653 456654
No 404
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=92.70 E-value=1 Score=42.78 Aligned_cols=121 Identities=17% Similarity=0.080 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCcc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAE 237 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~ 237 (367)
.+.+-+....++|.|||-+.+.-| |+- -|.+.|.+++. .+++.++.. +|.+=++
T Consensus 81 al~~lv~~li~~Gv~Gl~v~GTTG----------------E~~~Ls~eEr~~vi~----~~ve~~~grvpViaGvg---- 136 (360)
T 4dpp_A 81 AYDDLVNIQIQNGAEGVIVGGTTG----------------EGQLMSWDEHIMLIG----HTVNCFGGSIKVIGNTG---- 136 (360)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTT----------------TGGGSCHHHHHHHHH----HHHHHHTTTSEEEEECC----
T ss_pred HHHHHHHHHHHcCCCEEEeccccc----------------ChhhCCHHHHHHHHH----HHHHHhCCCCeEEEecC----
Confidence 444555566789999999876543 222 24566655444 444445433 5554333
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC-----C--CCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG-----G--YSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G-----g--it~~~a~~~ 310 (367)
.++.++++++++..++.|+|.+-+..+.+..+ +......+.+.|.+. .||+.-. + ++++...++
T Consensus 137 ------~~st~eai~la~~A~~~Gadavlvv~PyY~k~-sq~gl~~hf~~IA~a--~PiilYNiP~rTg~~ls~e~l~~L 207 (360)
T 4dpp_A 137 ------SNSTREAIHATEQGFAVGMHAALHINPYYGKT-SIEGLIAHFQSVLHM--GPTIIYNVPGRTGQDIPPRAIFKL 207 (360)
T ss_dssp ------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHTTGGG--SCEEEEECHHHHSCCCCHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHh--CCEEEEeCCcccCCCCCHHHHHHH
Confidence 33567899999999999999998876755432 222223344455554 4755432 2 478877777
Q ss_pred HHc
Q 017733 311 VAA 313 (367)
Q Consensus 311 L~~ 313 (367)
.+.
T Consensus 208 a~~ 210 (360)
T 4dpp_A 208 SQN 210 (360)
T ss_dssp TTS
T ss_pred hcC
Confidence 643
No 405
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=92.68 E-value=1.3 Score=41.22 Aligned_cols=139 Identities=12% Similarity=0.092 Sum_probs=83.4
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc-ccCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA-EAVD 243 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~-~~~~ 243 (367)
.+++.++|.|.|.|..+. |+. ++..+.+-+.+.-...+.++++.+|+.- . .+.+-++.. +. +..+
T Consensus 87 i~~a~~~g~~~v~i~~~~--------sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~G-~-~v~~~i~~~--~~~~~~~ 152 (307)
T 1ydo_A 87 LENALEGGINEACVFMSA--------SET--HNRKNINKSTSESLHILKQVNNDAQKAN-L-TTRAYLSTV--FGCPYEK 152 (307)
T ss_dssp HHHHHHHTCSEEEEEEES--------SHH--HHHTTTCSCHHHHHHHHHHHHHHHHHTT-C-EEEEEEECT--TCBTTTB
T ss_pred HHHHHhCCcCEEEEEeec--------CHH--HHHHHhCCCHHHHHHHHHHHHHHHHHCC-C-EEEEEEEEE--ecCCcCC
Confidence 556677899999987644 222 2223445566666677778888777753 2 222212110 10 0012
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeC----CCCHHHHHHHHHcCCCcE
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAG----GYSRDEGNKAVAANYTDL 318 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G----git~~~a~~~L~~G~~D~ 318 (367)
..+.+...++++.+.+.|+|.|.+..-. + ...+......++.+++.++ +|+-.=+ |.....+..+++.| +|.
T Consensus 153 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G-~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aG-a~~ 229 (307)
T 1ydo_A 153 DVPIEQVIRLSEALFEFGISELSLGDTI-G-AANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMG-ITV 229 (307)
T ss_dssp CCCHHHHHHHHHHHHHHTCSCEEEECSS-C-CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHT-CCE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEEcCCC-C-CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhC-CCE
Confidence 3457888999999999999999875321 1 1112223456788888884 5543322 23467788999999 776
Q ss_pred Ec
Q 017733 319 VA 320 (367)
Q Consensus 319 V~ 320 (367)
|-
T Consensus 230 vd 231 (307)
T 1ydo_A 230 FD 231 (307)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 406
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.67 E-value=2.5 Score=36.35 Aligned_cols=107 Identities=11% Similarity=-0.018 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhh-HHHHHHHH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSET-QRSLLSMR 289 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~-~~~~~~ir 289 (367)
+..++|+++|+.....+|.+-+-. .+..+ .+++.+.++|+|++.++... .... ....+.++
T Consensus 39 ~g~~~i~~ir~~~~~~~i~~~~~~---------~~~~~---~~~~~~~~~Gad~v~v~~~~------~~~~~~~~~~~~~ 100 (211)
T 3f4w_A 39 EGVNAIKAIKEKYPHKEVLADAKI---------MDGGH---FESQLLFDAGADYVTVLGVT------DVLTIQSCIRAAK 100 (211)
T ss_dssp HTTHHHHHHHHHCTTSEEEEEEEE---------CSCHH---HHHHHHHHTTCSEEEEETTS------CHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCCCEEEEEEEe---------ccchH---HHHHHHHhcCCCEEEEeCCC------ChhHHHHHHHHHH
Confidence 347899999998643455432211 11122 35777888999999986431 1112 23444455
Q ss_pred HhcCCcEEEe-CCC-CH-HHHHHHHHcCCCcEEcccHHHH------hCCchHHHHHh
Q 017733 290 RAFEGTFIAA-GGY-SR-DEGNKAVAANYTDLVAFGRLFL------ANPDLPKRFEL 337 (367)
Q Consensus 290 ~~~~~pvi~~-Ggi-t~-~~a~~~L~~G~~D~V~~gR~~l------adP~l~~k~~~ 337 (367)
+. ..+++.. -.. |+ +.++.+++.| +|+|.+..++- ..++..+++++
T Consensus 101 ~~-g~~~~v~~~~~~t~~~~~~~~~~~g-~d~i~v~~g~~g~~~~~~~~~~i~~l~~ 155 (211)
T 3f4w_A 101 EA-GKQVVVDMICVDDLPARVRLLEEAG-ADMLAVHTGTDQQAAGRKPIDDLITMLK 155 (211)
T ss_dssp HH-TCEEEEECTTCSSHHHHHHHHHHHT-CCEEEEECCHHHHHTTCCSHHHHHHHHH
T ss_pred Hc-CCeEEEEecCCCCHHHHHHHHHHcC-CCEEEEcCCCcccccCCCCHHHHHHHHH
Confidence 44 5555432 233 54 6688999998 99988643211 13356666665
No 407
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.63 E-value=0.84 Score=41.47 Aligned_cols=75 Identities=13% Similarity=-0.094 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCchh-----------------hHHHHHHHHHh-cCCcEEEeCCCC-----
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE-----------------TQRSLLSMRRA-FEGTFIAAGGYS----- 303 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~-----------------~~~~~~~ir~~-~~~pvi~~Ggit----- 303 (367)
.+.+.++++.|++.|+|+||+..+...+....+. ....++.+|+. +++||+.-+..+
T Consensus 30 ~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~ 109 (268)
T 1qop_A 30 IEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN 109 (268)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHh
Confidence 5678899999999999999996543222111111 12457789998 789977644222
Q ss_pred --HHHHHHHHHcCCCcEEccc
Q 017733 304 --RDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 304 --~~~a~~~L~~G~~D~V~~g 322 (367)
...++.+.+.| +|.|.+-
T Consensus 110 g~~~~~~~~~~aG-adgii~~ 129 (268)
T 1qop_A 110 GIDAFYARCEQVG-VDSVLVA 129 (268)
T ss_dssp CHHHHHHHHHHHT-CCEEEET
T ss_pred hHHHHHHHHHHcC-CCEEEEc
Confidence 35567888888 8977664
No 408
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.56 E-value=5.8 Score=35.83 Aligned_cols=89 Identities=12% Similarity=-0.018 Sum_probs=57.9
Q ss_pred cceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCC--ccccCC-chhhHHHHHHHHHhcCCcEEEeCCC
Q 017733 226 ERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPR--MIQLTD-KSETQRSLLSMRRAFEGTFIAAGGY 302 (367)
Q Consensus 226 ~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~--~~~~~~-~~~~~~~~~~ir~~~~~pvi~~Ggi 302 (367)
.||.++-.. ..+++++...++.+...|-..+++..+. ....+. ...+...+..+|+.+..||++--..
T Consensus 131 kPV~lk~G~---------~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH 201 (262)
T 1zco_A 131 NPVLLKRGM---------GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSH 201 (262)
T ss_dssp SCEEEECCT---------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSST
T ss_pred CcEEEecCC---------CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCC
Confidence 388887654 2257778888888888897667765533 111221 2224456778999888898776554
Q ss_pred --CH-----HHHHHHHHcCCCcEEcccHH
Q 017733 303 --SR-----DEGNKAVAANYTDLVAFGRL 324 (367)
Q Consensus 303 --t~-----~~a~~~L~~G~~D~V~~gR~ 324 (367)
.. ..+..+++.| +|.|++=+-
T Consensus 202 ~~g~~~~v~~~~~aAva~G-a~Gl~iE~H 229 (262)
T 1zco_A 202 PAGRRSLVIPLAKAAYAIG-ADGIMVEVH 229 (262)
T ss_dssp TTCSGGGHHHHHHHHHHTT-CSEEEEEBC
T ss_pred CCCccchHHHHHHHHHHcC-CCEEEEEec
Confidence 22 5577888888 897776544
No 409
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=92.52 E-value=5.9 Score=35.84 Aligned_cols=145 Identities=12% Similarity=0.047 Sum_probs=80.8
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+-.|+.+.++|||.|-+ +.. |-...+ -..|.-.-++ .-.+...++|++.++.-+|.+.+. |
T Consensus 27 ~~sA~l~e~aG~d~ilv-Gds--l~~~~l-----G~~dt~~vtl----demi~h~~aV~r~~~~~~vvaD~p----f--- 87 (264)
T 1m3u_A 27 YSFAKLFADEGLNVMLV-GDS--LGMTVQ-----GHDSTLPVTV----ADIAYHTAAVRRGAPNCLLLADLP----F--- 87 (264)
T ss_dssp HHHHHHHHHHTCCEEEE-CTT--HHHHTT-----CCSSSTTCCH----HHHHHHHHHHHHHCTTSEEEEECC----T---
T ss_pred HHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCcCH----HHHHHHHHHHHhhCCCCcEEEECC----C---
Confidence 56788888999999987 311 111111 1111111122 234666777887775334556542 2
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEE-----------eCCC-----CH-
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIA-----------AGGY-----SR- 304 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-----------~Ggi-----t~- 304 (367)
+.+.+.+++.+-+.+|.+.|++.+++-.+ ......++.+.++ .+||++ -|++ |.
T Consensus 88 gsy~~~~~a~~~a~rl~kaGa~aVklEgg--------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~ 158 (264)
T 1m3u_A 88 MAYATPEQAFENAATVMRAGANMVKIEGG--------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDE 158 (264)
T ss_dssp TSSSSHHHHHHHHHHHHHTTCSEEECCCS--------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCCEEEECCc--------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHH
Confidence 11225677888888888899999997433 1233444444443 578772 2443 32
Q ss_pred ------HHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 305 ------DEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 305 ------~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
++|..+.+.| +|+|.+== + ..++.+++.+.
T Consensus 159 ~a~~~i~rA~a~~eAG-A~~ivlE~--v-p~~~a~~it~~ 194 (264)
T 1m3u_A 159 AGDQLLSDALALEAAG-AQLLVLEC--V-PVELAKRITEA 194 (264)
T ss_dssp HHHHHHHHHHHHHHHT-CCEEEEES--C-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC-CcEEEEec--C-CHHHHHHHHHh
Confidence 3455666788 88776621 1 12566666654
No 410
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=92.46 E-value=1.1 Score=39.04 Aligned_cols=105 Identities=19% Similarity=0.149 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+.++.+.+.|++.||+..- + .-..+.++.+|+ ..-.++.-. .
T Consensus 26 ~~~~~~~~l~~gGv~~iel~~k----------------~-----------~~~~~~i~~~~~--~~~~~gag~-v----- 70 (207)
T 2yw3_A 26 DLLGLARVLEEEGVGALEITLR----------------T-----------EKGLEALKALRK--SGLLLGAGT-V----- 70 (207)
T ss_dssp CHHHHHHHHHHTTCCEEEEECS----------------S-----------THHHHHHHHHTT--SSCEEEEES-C-----
T ss_pred HHHHHHHHHHHcCCCEEEEeCC----------------C-----------hHHHHHHHHHhC--CCCEEEeCe-E-----
Confidence 3567788888999999998531 1 123677888887 322344322 1
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
- ..+ -++...+.|+|++|.. .. .....+..++ ...+++. |-.|++++.++++.| +|+|
T Consensus 71 ----l-~~d----~~~~A~~~GAd~v~~~--~~--------d~~v~~~~~~-~g~~~i~-G~~t~~e~~~A~~~G-ad~v 128 (207)
T 2yw3_A 71 ----R-SPK----EAEAALEAGAAFLVSP--GL--------LEEVAALAQA-RGVPYLP-GVLTPTEVERALALG-LSAL 128 (207)
T ss_dssp ----C-SHH----HHHHHHHHTCSEEEES--SC--------CHHHHHHHHH-HTCCEEE-EECSHHHHHHHHHTT-CCEE
T ss_pred ----e-eHH----HHHHHHHcCCCEEEcC--CC--------CHHHHHHHHH-hCCCEEe-cCCCHHHHHHHHHCC-CCEE
Confidence 0 122 2333456799999842 11 1233343443 5667665 334899999999998 9999
Q ss_pred cc
Q 017733 320 AF 321 (367)
Q Consensus 320 ~~ 321 (367)
.+
T Consensus 129 ~~ 130 (207)
T 2yw3_A 129 KF 130 (207)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 411
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=92.43 E-value=5.1 Score=35.40 Aligned_cols=51 Identities=20% Similarity=0.174 Sum_probs=37.7
Q ss_pred HHHHHHhc-CCcEEEeCCCC-HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHH
Q 017733 285 LLSMRRAF-EGTFIAAGGYS-RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFE 336 (367)
Q Consensus 285 ~~~ir~~~-~~pvi~~Ggit-~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~ 336 (367)
.+.+|+.. +++++..|+++ ..+.+.+.+.| +|.+.+|.+++.-+++...++
T Consensus 164 ~~~ir~~~~~~~ilyggsV~~~n~~~~~~~~g-iDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 164 VGLVSRHFPEVSVITGAGIESGDDVAAALRLG-TRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp HHHHHHHCTTSEEEEESSCCSHHHHHHHHHTT-CSEEEECHHHHTCSSHHHHHH
T ss_pred HHHHHhccCCCEEEEeCCCCcHHHHHHHHhCC-CCEEEECHHHHCCcCHHHHHH
Confidence 34455544 36788889995 66666666666 999999999999888776654
No 412
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.35 E-value=0.38 Score=44.03 Aligned_cols=77 Identities=13% Similarity=0.011 Sum_probs=56.2
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
..++++.+++.|++.|++..-.. +. ......++.+++.+++||+.-+.+ ++.+.+++.+.| +|.|.++-+.+.+
T Consensus 74 p~~~A~~y~~~GA~~isvltd~~---~f-~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~G-AD~VlLi~a~l~~ 148 (272)
T 3qja_A 74 PAKLAQAYQDGGARIVSVVTEQR---RF-QGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHG-ADMLLLIVAALEQ 148 (272)
T ss_dssp HHHHHHHHHHTTCSEEEEECCGG---GH-HHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTT-CSEEEEEGGGSCH
T ss_pred HHHHHHHHHHcCCCEEEEecChh---hc-CCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcC-CCEEEEecccCCH
Confidence 34688899999999999852100 00 112356788999999999977655 898999999999 9999997666554
Q ss_pred Cch
Q 017733 329 PDL 331 (367)
Q Consensus 329 P~l 331 (367)
.++
T Consensus 149 ~~l 151 (272)
T 3qja_A 149 SVL 151 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 413
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=92.27 E-value=0.65 Score=42.71 Aligned_cols=107 Identities=9% Similarity=0.011 Sum_probs=71.4
Q ss_pred ceEEEeCCCc-cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCc-cc--cCCchh----hHHHHHHHHHhcCCcEEE
Q 017733 227 RVGMRLSPYA-ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRM-IQ--LTDKSE----TQRSLLSMRRAFEGTFIA 298 (367)
Q Consensus 227 ~i~vrls~~~-~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~-~~--~~~~~~----~~~~~~~ir~~~~~pvi~ 298 (367)
.+++ ||... -|.+.+.....+.+.+.++.+.+.|+|+|+|..-.. .. +.+... ....++.+++.++.|| .
T Consensus 17 imGi-lN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~pi-S 94 (282)
T 1aj0_A 17 VMGI-LNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWI-S 94 (282)
T ss_dssp EEEE-EECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEE-E
T ss_pred EEEE-EeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeE-E
Confidence 4566 66432 233333345678889999999999999999964221 11 111111 1234566777666665 4
Q ss_pred eCCCCHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 299 AGGYSRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 299 ~Ggit~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
.--++++.++.+|+.| +|+|--..+. .||++..-+++
T Consensus 95 IDT~~~~va~aAl~aG-a~iINdvsg~-~d~~~~~~~a~ 131 (282)
T 1aj0_A 95 VDTSKPEVIRESAKVG-AHIINDIRSL-SEPGALEAAAE 131 (282)
T ss_dssp EECCCHHHHHHHHHTT-CCEEEETTTT-CSTTHHHHHHH
T ss_pred EeCCCHHHHHHHHHcC-CCEEEECCCC-CCHHHHHHHHH
Confidence 4556899999999998 9999888887 89988776654
No 414
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=92.26 E-value=0.29 Score=43.21 Aligned_cols=74 Identities=11% Similarity=0.165 Sum_probs=53.0
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHH--HHHHHHHcCCCcEEcccHHHH
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRD--EGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~--~a~~~L~~G~~D~V~~gR~~l 326 (367)
....+++...++|+|-+-++ + ....-++.+|+.++..++.++|+.++ +..++++.| +|++.+||+.+
T Consensus 116 ~v~~~a~~a~~~G~~GvV~s-a---------t~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~~~G-ad~iVvGr~I~ 184 (215)
T 3ve9_A 116 FYPYLREVARRVNPKGFVAP-A---------TRPSMISRVKGDFPDKLVISPGVGTQGAKPGIALCHG-ADYEIVGRSVY 184 (215)
T ss_dssp GHHHHHHHHHHHCCSEEECC-T---------TSHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHHHTT-CSEEEECHHHH
T ss_pred HHHHHHHHHHHcCCCceeeC-C---------CCHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHHHcC-CCEEEeCHHHc
Confidence 35567777778898865432 1 12244677888876567777998665 567888888 99999999999
Q ss_pred hCCchHH
Q 017733 327 ANPDLPK 333 (367)
Q Consensus 327 adP~l~~ 333 (367)
..+|-..
T Consensus 185 ~a~dp~~ 191 (215)
T 3ve9_A 185 QSADPVR 191 (215)
T ss_dssp TSSSHHH
T ss_pred CCCCHHH
Confidence 8776543
No 415
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=92.21 E-value=0.34 Score=48.41 Aligned_cols=69 Identities=14% Similarity=0.065 Sum_probs=49.8
Q ss_pred HHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 249 LGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 249 ~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
+..+.++.|.++|+|+|.+....-. .....+.++.||+.++ ++||+++-.|.+.++.+++.| +|.|-+|
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahGh----s~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~aG-AD~vkVG 350 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQGN----SVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAG-ADGLRIG 350 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCCC----SHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred cHHHHHHHHHhcCCcEEEEeccccc----cHHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHHcC-CCEEeec
Confidence 4567888899999999987433211 1224577889999885 456664445999999999999 9988443
No 416
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.12 E-value=0.39 Score=45.24 Aligned_cols=66 Identities=11% Similarity=0.168 Sum_probs=48.5
Q ss_pred HHHHHHhhhcC--ccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcc
Q 017733 251 LYMAKALNKFK--LLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 251 ~~l~~~L~~~G--vd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~ 321 (367)
.+.++.+.+.| ++++++.... .......+.++.+++.++.|++..|.+ ++++|+.+++.| +|+|.+
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~~~----G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~aG-ad~Ivv 176 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDIAH----GHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENAG-ADATKV 176 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEECSS----CCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCC----CCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcC-CCEEEE
Confidence 34577788888 8998874321 112234567889999997665556644 899999999999 999988
No 417
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.04 E-value=1.1 Score=41.22 Aligned_cols=139 Identities=14% Similarity=0.067 Sum_probs=81.6
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
++++.++|.|.|.|..+.- +. ++..+.+.+.+.-...+.++++.+|+. |. .+.+-++..-... ..+.
T Consensus 86 i~~a~~ag~~~v~i~~~~s--------d~--~~~~~~~~~~~e~l~~~~~~i~~a~~~-G~-~v~~~l~~~~~~~-~~~~ 152 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAAS--------EL--FTKKNINCSIEESFQRFDAILKAAQSA-NI-SVRGYVSCALGCP-YEGK 152 (298)
T ss_dssp HHHHHHTTCSEEEEEEESC--------HH--HHHHHHSCCHHHHHHHHHHHHHHHHHT-TC-EEEEEEETTTCBT-TTBS
T ss_pred HHHHHHCCCCEEEEEecCC--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHC-CC-eEEEEEEEEeeCC-cCCC
Confidence 5667789999999865431 11 122233445566666677777777775 32 2222222100000 0112
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeC--CC--CHHHHHHHHHcCCCcEE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAG--GY--SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~G--gi--t~~~a~~~L~~G~~D~V 319 (367)
.+.+...++++.+.+.|++.|.+..-. + ..........++.+++.++ +|+-.=. .. ....+..+++.| ++.|
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~-G-~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aG-a~~v 229 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTI-G-VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMG-VSVV 229 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETT-S-CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCC-C-CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhC-CCEE
Confidence 357788999999999999999875321 1 1112223456788888885 5543322 22 356778999999 7766
No 418
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=91.98 E-value=1.7 Score=39.20 Aligned_cols=75 Identities=15% Similarity=0.022 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchh-----------------hHHHHHHHHHhc-CCcEEEeCCCCH---
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE-----------------TQRSLLSMRRAF-EGTFIAAGGYSR--- 304 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~-----------------~~~~~~~ir~~~-~~pvi~~Ggit~--- 304 (367)
+.+++.++++.|++.|+|.|++..+...+....+. ....++.+|+.+ ++|++.-+-+++
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~ 108 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFR 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHH
Confidence 35778899999999999999996553222111111 123477888888 889888654442
Q ss_pred ----HHHHHHHHcCCCcEEcc
Q 017733 305 ----DEGNKAVAANYTDLVAF 321 (367)
Q Consensus 305 ----~~a~~~L~~G~~D~V~~ 321 (367)
..++.+.+.| +|.|.+
T Consensus 109 ~g~~~f~~~~~~aG-~dgvii 128 (262)
T 2ekc_A 109 IGLEKFCRLSREKG-IDGFIV 128 (262)
T ss_dssp HCHHHHHHHHHHTT-CCEEEC
T ss_pred hhHHHHHHHHHHcC-CCEEEE
Confidence 4457777888 897776
No 419
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=91.98 E-value=4.1 Score=37.12 Aligned_cols=139 Identities=16% Similarity=0.119 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh---CCc-ceEEEeCC
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI---GAE-RVGMRLSP 234 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v---g~~-~i~vrls~ 234 (367)
++..+.+++..++|..||.|-.+.+ + -|..+.. ..-..+.|++++++. |.+ .|.-|.-.
T Consensus 92 ~~~~~~v~~l~~aGaagv~iED~~~--------~--------~~k~l~~-~~e~~~~I~aa~~a~~~~g~~~~i~aRtda 154 (275)
T 2ze3_A 92 EDVRRTVEHFAALGVAGVNLEDATG--------L--------TPTELYD-LDSQLRRIEAARAAIDASGVPVFLNARTDT 154 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCS--------S--------SSSCBCC-HHHHHHHHHHHHHHHHHHTSCCEEEEECCT
T ss_pred HHHHHHHHHHHHcCCcEEEECCCcC--------C--------CCCccCC-HHHHHHHHHHHHHhHhhcCCCeEEEEechh
Confidence 4567788888899999999987642 0 0222222 223455666666663 433 34445533
Q ss_pred CccccccCC--CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHH
Q 017733 235 YAECAEAVD--SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVA 312 (367)
Q Consensus 235 ~~~~~~~~~--~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~ 312 (367)
. ..+.+. .+..+++++=++.++++|+|.|-+.. .+..+.++.+.+.+++|+..+.+-..-..+++-+
T Consensus 155 ~--~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i~~e~---------~~~~~~~~~i~~~~~~P~n~~~~~~~~~~~eL~~ 223 (275)
T 2ze3_A 155 F--LKGHGATDEERLAETVRRGQAYADAGADGIFVPL---------ALQSQDIRALADALRVPLNVMAFPGSPVPRALLD 223 (275)
T ss_dssp T--TTTCSSSHHHHHHHHHHHHHHHHHTTCSEEECTT---------CCCHHHHHHHHHHCSSCEEEECCTTSCCHHHHHH
T ss_pred h--hccccccchhhHHHHHHHHHHHHHCCCCEEEECC---------CCCHHHHHHHHHhcCCCEEEecCCCCCCHHHHHH
Confidence 1 100000 01367788889999999999886531 1234668889999999976654311112356667
Q ss_pred cCCCcEEcccHHHH
Q 017733 313 ANYTDLVAFGRLFL 326 (367)
Q Consensus 313 ~G~~D~V~~gR~~l 326 (367)
-| +.+|..+-.++
T Consensus 224 lG-v~~v~~~~~~~ 236 (275)
T 2ze3_A 224 AG-AARVSFGQSLM 236 (275)
T ss_dssp TT-CSEEECTTHHH
T ss_pred cC-CcEEEEChHHH
Confidence 77 88998876544
No 420
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=91.86 E-value=0.42 Score=47.56 Aligned_cols=68 Identities=13% Similarity=0.049 Sum_probs=50.2
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
..+.++.|.++|+|+|.+..... ......+.++.+++.+ ++||++.+..|+++++.+++.| +|+|.+|
T Consensus 230 ~~~~a~~l~~aG~d~I~id~a~g----~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aG-aD~I~vg 298 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVVDTAHG----HSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAG-ADAVKVG 298 (490)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCC----SBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred hHHHHHHHhhcccceEEecccCC----cchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcC-CCEEEEC
Confidence 34567778889999998864321 1123456788899998 5677774445999999999999 9999863
No 421
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.84 E-value=2.6 Score=36.15 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc
Q 017733 213 LEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF 292 (367)
Q Consensus 213 ~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~ 292 (367)
.++|+++|+..+..++.+-+.. .+..+. +++.+.++|+|++++|.... ........+.+++.
T Consensus 41 ~~~i~~l~~~~~~~~i~~~l~~---------~di~~~---~~~~a~~~Gad~v~vh~~~~-----~~~~~~~~~~~~~~- 102 (207)
T 3ajx_A 41 LSVITAVKKAHPDKIVFADMKT---------MDAGEL---EADIAFKAGADLVTVLGSAD-----DSTIAGAVKAAQAH- 102 (207)
T ss_dssp THHHHHHHHHSTTSEEEEEEEE---------CSCHHH---HHHHHHHTTCSEEEEETTSC-----HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCCeEEEEEEe---------cCccHH---HHHHHHhCCCCEEEEeccCC-----hHHHHHHHHHHHHc-
Confidence 6689999998753454442222 111222 44667789999998874311 01111223334332
Q ss_pred CCcEEE-eCCC-CHHH-HHHHHHcCCCcEEcc
Q 017733 293 EGTFIA-AGGY-SRDE-GNKAVAANYTDLVAF 321 (367)
Q Consensus 293 ~~pvi~-~Ggi-t~~~-a~~~L~~G~~D~V~~ 321 (367)
..++.+ .-.. ++++ ++.+.+.| +|+|.+
T Consensus 103 g~~~gv~~~s~~~p~~~~~~~~~~g-~d~v~~ 133 (207)
T 3ajx_A 103 NKGVVVDLIGIEDKATRAQEVRALG-AKFVEM 133 (207)
T ss_dssp TCEEEEECTTCSSHHHHHHHHHHTT-CSEEEE
T ss_pred CCceEEEEecCCChHHHHHHHHHhC-CCEEEE
Confidence 445422 2234 6666 55555666 999844
No 422
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=91.82 E-value=2.1 Score=37.93 Aligned_cols=113 Identities=14% Similarity=0.042 Sum_probs=64.9
Q ss_pred HHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017733 84 KEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
+...+.++++.++++..+.|+++.-. .||.+ +..+
T Consensus 98 ~~v~~ei~~v~~a~~~~~lKvIlEt~--------------------------------------~Lt~e-------ei~~ 132 (226)
T 1vcv_A 98 AEVRRDLISVVGAAGGRVVKVITEEP--------------------------------------YLRDE-------ERYT 132 (226)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEECCGG--------------------------------------GCCHH-------HHHH
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecc--------------------------------------CCCHH-------HHHH
Confidence 45567788888888766667665442 13433 3468
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCC-chhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGG-SLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAV 242 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGg-s~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~ 242 (367)
+++.+.++|.|.|+-.-|.+ ...+=++.. +.|| +++ ..++..++++ .+| ..++||.+.
T Consensus 133 a~~ia~eaGADfVKTSTGf~--~~~~~~~~~-----~~~gAt~~-dv~lm~~~i~----~~g-~~v~vKaaG-------- 191 (226)
T 1vcv_A 133 LYDIIAEAGAHFIKSSTGFA--EEAYAARQG-----NPVHSTPE-RAAAIARYIK----EKG-YRLGVKMAG-------- 191 (226)
T ss_dssp HHHHHHHHTCSEEECCCSCC--CHHHHHHTT-----CCSSCCHH-HHHHHHHHHH----HHT-CCCEEEEES--------
T ss_pred HHHHHHHcCCCEEEeCCCCC--ccccccccC-----CCCCCCHH-HHHHHHHHHH----HhC-CCceEEEeC--------
Confidence 88999999999999553321 000000111 1244 333 2333333332 255 357888886
Q ss_pred CCChHHHHHHHHHHhhhcCcc
Q 017733 243 DSNPEALGLYMAKALNKFKLL 263 (367)
Q Consensus 243 ~~~~~~~~~~l~~~L~~~Gvd 263 (367)
+--+.+++..+.+.. ++|++
T Consensus 192 Girt~~~al~~i~a~-~~Ga~ 211 (226)
T 1vcv_A 192 GIRTREQAKAIVDAI-GWGED 211 (226)
T ss_dssp SCCSHHHHHHHHHHH-CSCSC
T ss_pred CCCCHHHHHHHHHHH-HCCCC
Confidence 223467777777766 47887
No 423
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=91.74 E-value=3.1 Score=38.32 Aligned_cols=85 Identities=8% Similarity=-0.074 Sum_probs=53.0
Q ss_pred cceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCcc-EEEEecCCccccC----C-ch-hhHHHHHHHHHhcCCcEEE
Q 017733 226 ERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLL-YLHVIEPRMIQLT----D-KS-ETQRSLLSMRRAFEGTFIA 298 (367)
Q Consensus 226 ~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd-~i~v~~~~~~~~~----~-~~-~~~~~~~~ir~~~~~pvi~ 298 (367)
.++++-+.. ...+++.+.++.+.++|+| +|+++-....... . .+ ...+.++.+|+.++.||++
T Consensus 94 ~p~~~~i~g----------~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~v 163 (311)
T 1jub_A 94 GPIFFSIAG----------MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGV 163 (311)
T ss_dssp SCCEEEECC----------SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEE
T ss_pred CCEEEEcCC----------CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 367765543 2467788999999999999 9988643211111 0 11 1235567788888888764
Q ss_pred --eCCCCHHH----HHHHHHcCCCcEEcc
Q 017733 299 --AGGYSRDE----GNKAVAANYTDLVAF 321 (367)
Q Consensus 299 --~Ggit~~~----a~~~L~~G~~D~V~~ 321 (367)
..+++.++ ++.+.+.| +|+|.+
T Consensus 164 Ki~~~~~~~~~~~~a~~~~~~G-~d~i~v 191 (311)
T 1jub_A 164 KLPPYFDLVHFDIMAEILNQFP-LTYVNS 191 (311)
T ss_dssp EECCCCSHHHHHHHHHHHTTSC-CCEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHcC-CcEEEe
Confidence 34456544 45555566 898765
No 424
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=91.70 E-value=1.5 Score=41.82 Aligned_cols=39 Identities=8% Similarity=0.109 Sum_probs=33.7
Q ss_pred HHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 283 RSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 283 ~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
..++.+++.+++||+.-+..++++++.+++.| +|+|.++
T Consensus 215 ~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~G-ad~I~vs 253 (370)
T 1gox_A 215 KDVAWLQTITSLPILVKGVITAEDARLAVQHG-AAGIIVS 253 (370)
T ss_dssp HHHHHHHHHCCSCEEEECCCSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecCCHHHHHHHHHcC-CCEEEEC
Confidence 45778999999999976767999999999999 9999873
No 425
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.62 E-value=0.29 Score=46.85 Aligned_cols=74 Identities=8% Similarity=0.026 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCC-ccccCCch----hhHHHHHHHHHhcCCcEEE---eCCCCHHHHHHHHHcCCCc
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPR-MIQLTDKS----ETQRSLLSMRRAFEGTFIA---AGGYSRDEGNKAVAANYTD 317 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~-~~~~~~~~----~~~~~~~~ir~~~~~pvi~---~Ggit~~~a~~~L~~G~~D 317 (367)
+.+.+.+.++.+ ++|...||+.... ...+.+.. ...+.++.+++.+++||++ ++++++++|+.+.+.| +|
T Consensus 136 ~~~~~~~av~~~-~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~aG-ad 213 (368)
T 3vkj_A 136 GLKEFQDAIQMI-EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKESGNGISMETAKLLYSYG-IK 213 (368)
T ss_dssp CHHHHHHHHHHT-TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHHHTT-CC
T ss_pred CHHHHHHHHHHh-cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHhCC-CC
Confidence 456666667666 5566667753211 01111111 2456788899999999988 4457999999999999 99
Q ss_pred EEcc
Q 017733 318 LVAF 321 (367)
Q Consensus 318 ~V~~ 321 (367)
+|.+
T Consensus 214 ~I~V 217 (368)
T 3vkj_A 214 NFDT 217 (368)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9977
No 426
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=91.57 E-value=0.52 Score=46.35 Aligned_cols=134 Identities=13% Similarity=0.009 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEE
Q 017733 153 EIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMR 231 (367)
Q Consensus 153 eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vr 231 (367)
||...+..|++++. .+.|+|.|-+|+..| .+.+++..+..+.. .|.++
T Consensus 88 DIpnT~~~~a~~~~--~~lg~d~vTvh~~~G-----------------------------~~~l~~~~~~~~~~v~vL~~ 136 (453)
T 3qw4_B 88 DIADTADAYATSAF--KHLNAHAITASPYMG-----------------------------SDSLQPFMRYPDKAVFVLCK 136 (453)
T ss_dssp CCHHHHHHHHHHHH--TTSCCSEEEECSTTC-----------------------------HHHHHHHHTCTTSEEEEEEE
T ss_pred ChHHHHHHHHHHHH--HHcCCCEEEEcccCC-----------------------------HHHHHHHHHhhCCcEEEEEe
Confidence 56666666555543 148999999987544 23333333333323 56677
Q ss_pred eCCCc--cccccCC-CChH-HHHHHHHH-HhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcC-CcEEEeCCC---
Q 017733 232 LSPYA--ECAEAVD-SNPE-ALGLYMAK-ALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFE-GTFIAAGGY--- 302 (367)
Q Consensus 232 ls~~~--~~~~~~~-~~~~-~~~~~l~~-~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~-~pvi~~Ggi--- 302 (367)
+|-.+ ++.+.+. +.++ +....+++ .+.+.|.+-+-++ .+ ...-++.+|+.++ .+++ +-|+
T Consensus 137 tS~~~~~~lq~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~g-at---------~~~e~~~ir~~~~~~~~l-~PGig~q 205 (453)
T 3qw4_B 137 TSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVG-AT---------DPVALARVRARAPTLWFL-VPGIGAQ 205 (453)
T ss_dssp CSSGGGGGTTTSEETTEEHHHHHHHHHTTTTCTTSCEEEEEC-TT---------CHHHHHHHHHHCSSCCEE-ECCSSTT
T ss_pred CCCcchHHHHhcccCCCCHHHHHHHHHHHHHhhcCCeEEEEC-CC---------CHHHHHHHHHhCCCCeEE-ECCcCCC
Confidence 76532 2222111 1122 33444555 4445677766442 11 1234677888875 3444 4443
Q ss_pred --CHHHHHHHHHcCCCcE------EcccHHHHhCCchH
Q 017733 303 --SRDEGNKAVAANYTDL------VAFGRLFLANPDLP 332 (367)
Q Consensus 303 --t~~~a~~~L~~G~~D~------V~~gR~~ladP~l~ 332 (367)
||+++ ++.| +|. +.+||+.+.-+|..
T Consensus 206 g~tp~~a---~~~g-~d~~~~~~livvgR~I~~A~dp~ 239 (453)
T 3qw4_B 206 GGSLKAS---LDAG-LRADGSGMLINVSRGLARAADPR 239 (453)
T ss_dssp CCCHHHH---HHHH-CCTTSCCEEEEESHHHHSCSCHH
T ss_pred CCCHHHH---HHhc-CCcccCCceEecChhhccCCCHH
Confidence 45554 4444 454 99999999877753
No 427
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=91.53 E-value=0.32 Score=43.43 Aligned_cols=75 Identities=16% Similarity=0.078 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCc-----------------hhhHHHHHHHHHhcCCcEEEeCCCCH-----
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDK-----------------SETQRSLLSMRRAFEGTFIAAGGYSR----- 304 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~-----------------~~~~~~~~~ir~~~~~pvi~~Ggit~----- 304 (367)
.+++.+.++.+++. +|+||+.-+.-.+.... ......++.+|+.+++||...+.+++
T Consensus 18 ~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~ 96 (248)
T 1geq_A 18 KQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAG 96 (248)
T ss_dssp HHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHHC
T ss_pred HHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhcC
Confidence 46788899999999 99999974421111100 01135677888888889887665554
Q ss_pred --HHHHHHHHcCCCcEEcccH
Q 017733 305 --DEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 305 --~~a~~~L~~G~~D~V~~gR 323 (367)
+.++.+++.| +|+|.++-
T Consensus 97 ~~~~~~~~~~~G-ad~v~~~~ 116 (248)
T 1geq_A 97 VRNFLAEAKASG-VDGILVVD 116 (248)
T ss_dssp HHHHHHHHHHHT-CCEEEETT
T ss_pred HHHHHHHHHHCC-CCEEEECC
Confidence 6788899998 99999973
No 428
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=91.50 E-value=2 Score=39.23 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM 230 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v 230 (367)
++.++.|..|.+||...|-||. |.++ |. -..+.....|++++||+++++-+|.+
T Consensus 30 eEia~~A~~~~~AGAaivHlHv----------------Rd~~-G~-~s~d~~~~~e~~~~IR~~~pd~ii~~ 83 (275)
T 3no5_A 30 SEQVESTQAAFEAGATLVHLHV----------------RNDD-ET-PTSNPDRFALVLEGIRKHAPGMITQV 83 (275)
T ss_dssp HHHHHHHHHHHHHTCCEEEECE----------------ECTT-SC-EECCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHHHHHccCcEEEEee----------------cCCC-CC-cCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 4558899999999999999985 6666 42 22357788999999999985324443
No 429
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=91.48 E-value=3.3 Score=38.26 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=86.8
Q ss_pred HHHHHHHHHhCCCEEEEec-ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHG-ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~-~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+ +.+. ..+ -..|.-.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 32 ~~sA~l~e~aGf~ai~vs~~s~a~---~~~-----G~pD~~~vt~~----em~~~~~~I~r~~~-~PviaD~d~------ 92 (298)
T 3eoo_A 32 AYAAKMAEAVGFKAVYLSGGGVAA---NSL-----GIPDLGISTMD----DVLVDANRITNATN-LPLLVDIDT------ 92 (298)
T ss_dssp HHHHHHHHHHTCSCEEECHHHHHH---HTT-----CCCSSSCCCHH----HHHHHHHHHHHHCC-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHHH---Hhc-----CCCCCCCCCHH----HHHHHHHHHHhhcC-CeEEEECCC------
Confidence 4567788899999999864 2210 111 12222111333 23455556655553 377775532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cCC--chhhHHHHHHHH---Hhc-CCcEEEeCCC-C------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LTD--KSETQRSLLSMR---RAF-EGTFIAAGGY-S------ 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~~--~~~~~~~~~~ir---~~~-~~pvi~~Ggi-t------ 303 (367)
+.+ ..+.+.+.++.++++|+..+++-...... ... -.+..++..+|+ ++- +.+++.+.+. .
T Consensus 93 -Gyg-~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gl 170 (298)
T 3eoo_A 93 -GWG-GAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGI 170 (298)
T ss_dssp -CSS-SHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHH
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCH
Confidence 112 35667788899999999999986543211 111 112234444444 332 2345555543 1
Q ss_pred ---HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCC
Q 017733 304 ---RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNA 339 (367)
Q Consensus 304 ---~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~ 339 (367)
.+.+..+.+.| +|+|.+ ..+.+++.++++.+..
T Consensus 171 deai~Ra~ay~~AG-AD~if~--~~~~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 171 DAAIERAIAYVEAG-ADMIFP--EAMKTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHHHTT-CSEEEE--CCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHhhHhcC-CCEEEe--CCCCCHHHHHHHHHHc
Confidence 24467788888 999987 3346888888877653
No 430
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=91.42 E-value=0.21 Score=59.88 Aligned_cols=53 Identities=13% Similarity=0.144 Sum_probs=43.9
Q ss_pred HHHHHhcCCcEEEeCCC-CHHHHHHHH-----------HcCCCcEEcccHHHHhCC------chHHHHHhCC
Q 017733 286 LSMRRAFEGTFIAAGGY-SRDEGNKAV-----------AANYTDLVAFGRLFLANP------DLPKRFELNA 339 (367)
Q Consensus 286 ~~ir~~~~~pvi~~Ggi-t~~~a~~~L-----------~~G~~D~V~~gR~~ladP------~l~~k~~~g~ 339 (367)
..|++.+++||++.||| +++++..+| ..| +|.|.||..+++=+ .+-+.+.+-.
T Consensus 599 ~~ir~~~~iPViaaGGI~d~~~vaaal~g~ws~~~~~p~lG-AdGV~vGTrfl~t~Ea~~s~~~K~~l~~a~ 669 (3089)
T 3zen_D 599 SELRSRSNITICVGGGIGTPERSAEYLSGRWAEVHGYPLMP-IDGILVGTAAMATLEATTSPQVKQLLVETK 669 (3089)
T ss_dssp HHHTTCTTEEEEEESSCCCTTTTHHHHHTGGGGTTTCCCCC-CSEEECSSTTTTCTTSCBCHHHHHHHHHCC
T ss_pred HHHhhcCCCeEEEEeCCCCHHHHHHHhccccccccCccCCC-CCEEEecHHHHhCcccCCCHHHHHHHHhCC
Confidence 66778889999999999 899999999 888 99999999999765 3555555543
No 431
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=91.41 E-value=1.5 Score=41.48 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCccc---ccCCCCCCC-c---hhhHhHHHHHHHHHHHHHhCCcceEEEe
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQV---NDRTDEYGG-S---LENRCRFALEVVEAVVREIGAERVGMRL 232 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~---N~R~D~yGg-s---~enr~r~~~eii~aiR~~vg~~~i~vrl 232 (367)
...+-+..|++||.|+|....-. ...++||.. ..+. +| + +-.+..+-.|-++.+++.+...-|.+=-
T Consensus 36 ~a~~li~~ak~aGadavKfq~~k---~~tl~s~~~~~fq~~~---~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~s 109 (349)
T 2wqp_A 36 TAFEMVDAAYNAGAEVVKHQTHI---VEDEMSDEAKQVIPGN---ADVSIYEIMERCALNEEDEIKLKEYVESKGMIFIS 109 (349)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECC---HHHHCCGGGGGCCCTT---CSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhCCCEEeeeecc---cccccCcchhccccCC---CCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEE
Confidence 33445556678999999976533 344445533 1111 13 2 2334444556666666665322111111
Q ss_pred CCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHH---HH
Q 017733 233 SPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDE---GN 308 (367)
Q Consensus 233 s~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~ 308 (367)
++++ .+ -++.|++.|+|.+-|..+... +..+++.+.+ .+.||+..-|. |.++ |.
T Consensus 110 t~~d----------~~----svd~l~~~~v~~~KI~S~~~~-------n~~LL~~va~-~gkPviLstGmat~~Ei~~Av 167 (349)
T 2wqp_A 110 TLFS----------RA----AALRLQRMDIPAYKIGSGECN-------NYPLIKLVAS-FGKPIILSTGMNSIESIKKSV 167 (349)
T ss_dssp EECS----------HH----HHHHHHHHTCSCEEECGGGTT-------CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHH
T ss_pred eeCC----------HH----HHHHHHhcCCCEEEECccccc-------CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHH
Confidence 3321 11 233466778999988655432 4456666665 57899999888 7655 44
Q ss_pred HHHHcCCCcEEcc
Q 017733 309 KAVAANYTDLVAF 321 (367)
Q Consensus 309 ~~L~~G~~D~V~~ 321 (367)
++|....++++.+
T Consensus 168 e~i~~~G~~iiLl 180 (349)
T 2wqp_A 168 EIIREAGVPYALL 180 (349)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 5554433577665
No 432
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.32 E-value=1.2 Score=41.23 Aligned_cols=73 Identities=11% Similarity=0.094 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHhhhcCcc----EEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC---CHH----HHHHHHH-c
Q 017733 246 PEALGLYMAKALNKFKLL----YLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY---SRD----EGNKAVA-A 313 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd----~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi---t~~----~a~~~L~-~ 313 (367)
+.+.....++...++|.| ++-+- ++ +..+.+.+...+||+..||= +++ ..+++++ .
T Consensus 198 dp~~Va~aaRiAaELGADs~~tivK~~-------y~-----e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~a 265 (307)
T 3fok_A 198 STDAVIQSVAIAAGLGNDSSYTWMKLP-------VV-----EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLP 265 (307)
T ss_dssp SHHHHHHHHHHHHTCSSCCSSEEEEEE-------CC-----TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTST
T ss_pred CHHHHHHHHHHHHHhCCCcCCCEEEeC-------Cc-----HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhC
Confidence 456666777777889999 88752 11 22466777788997666653 333 4567777 5
Q ss_pred CCCcEEcccHHHHh--CCch
Q 017733 314 NYTDLVAFGRLFLA--NPDL 331 (367)
Q Consensus 314 G~~D~V~~gR~~la--dP~l 331 (367)
| +..|.+||-++. ++|-
T Consensus 266 G-a~Gv~vGRNIfQ~~~~dp 284 (307)
T 3fok_A 266 G-VRGLTVGRTLLYPQDGDV 284 (307)
T ss_dssp T-EEEEEECTTTSSCSSSCH
T ss_pred C-CeEEeechhhccCCCCCH
Confidence 6 899999999999 5553
No 433
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=91.29 E-value=6 Score=36.85 Aligned_cols=156 Identities=13% Similarity=0.019 Sum_probs=90.4
Q ss_pred HHHHHHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+... .+. ..+ -..|.--=+++ -.++.+++|.+.++.-||.+.+--
T Consensus 49 ~~sA~i~e~aGfdai~vs~~~~a~---~~l-----G~pD~~~vt~~----em~~~~~~I~r~~~~~PviaD~d~------ 110 (318)
T 1zlp_A 49 ALSAAVVEKTGFHAAFVSGYSVSA---AML-----GLPDFGLLTTT----EVVEATRRITAAAPNLCVVVDGDT------ 110 (318)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHH---HHH-----CCCSSSCSCHH----HHHHHHHHHHHHSSSSEEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECcHHHhh---Hhc-----CCCCCCCCCHH----HHHHHHHHHHhhccCCCEEEeCCC------
Confidence 45678888999999997652 221 111 12232111333 346667777777754578876632
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cCCc--hhhHHH---HHHHHHhc-CCcEEEeCCC-C------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LTDK--SETQRS---LLSMRRAF-EGTFIAAGGY-S------ 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~~~--~~~~~~---~~~ir~~~-~~pvi~~Ggi-t------ 303 (367)
+.+ ..+.+.+.++.++++|++.+++-.....+ ..++ .+.... ++.++++. ..++...++- .
T Consensus 111 -Gyg-~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl 188 (318)
T 1zlp_A 111 -GGG-GPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGL 188 (318)
T ss_dssp -CSS-SHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHH
T ss_pred -CCC-CHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCH
Confidence 123 45678888999999999999996543211 0111 112233 33444433 2344444443 1
Q ss_pred ---HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCCC
Q 017733 304 ---RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 304 ---~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~~ 340 (367)
.+.+..+.+.| +|+|.+= .+.+++..+++.+...
T Consensus 189 ~~ai~Ra~Ay~eAG-Ad~i~~e--~~~~~e~~~~i~~~l~ 225 (318)
T 1zlp_A 189 EEGIRRANLYKEAG-ADATFVE--APANVDELKEVSAKTK 225 (318)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEC--CCCSHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcC-CCEEEEc--CCCCHHHHHHHHHhcC
Confidence 23566777888 9999883 3466788888877543
No 434
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=91.06 E-value=1.8 Score=41.33 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=33.9
Q ss_pred HHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 282 QRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
+..++.+++.+++||+.-|..++++++.+.+.| +|+|.+
T Consensus 218 ~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~~G-ad~I~v 256 (368)
T 2nli_A 218 PRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRG-ASGIWV 256 (368)
T ss_dssp HHHHHHHHHHSSSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHcC-CCEEEE
Confidence 345788999999999887767999999999999 999887
No 435
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=91.05 E-value=11 Score=36.00 Aligned_cols=98 Identities=12% Similarity=-0.003 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecC-C--ccccCCchhhHHHHHHHHH
Q 017733 214 EVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEP-R--MIQLTDKSETQRSLLSMRR 290 (367)
Q Consensus 214 eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~-~--~~~~~~~~~~~~~~~~ir~ 290 (367)
++++++-+ .| .||.++-+. ..+++++...++.+.+.|..-+.+... . +........+...+..+|+
T Consensus 240 ~LL~~~a~-~g-kPVilk~G~---------~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~ 308 (385)
T 3nvt_A 240 ELLKAAGR-VD-KPILLKRGL---------SATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKK 308 (385)
T ss_dssp HHHHHHHT-SS-SCEEEECCT---------TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHH
T ss_pred HHHHHHHc-cC-CcEEEecCC---------CCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHH
Confidence 45555432 22 388887755 235777888888888888654444433 2 2211112234556778999
Q ss_pred hcCCcEEEeC----CC-C--HHHHHHHHHcCCCcEEcccH
Q 017733 291 AFEGTFIAAG----GY-S--RDEGNKAVAANYTDLVAFGR 323 (367)
Q Consensus 291 ~~~~pvi~~G----gi-t--~~~a~~~L~~G~~D~V~~gR 323 (367)
.+..||+.-. |- . +..+..+++.| +|.+.+=+
T Consensus 309 ~~~lpV~~D~th~~G~r~~v~~~a~AAvA~G-A~gl~iE~ 347 (385)
T 3nvt_A 309 ETHLPVMVDVTHSTGRKDLLLPCAKAALAIE-ADGVMAEV 347 (385)
T ss_dssp HBSSCEEEEHHHHHCCGGGHHHHHHHHHHTT-CSEEEEEB
T ss_pred hcCCCEEEcCCCCCCccchHHHHHHHHHHhC-CCEEEEEe
Confidence 8899986542 11 1 35678899999 89666543
No 436
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=91.02 E-value=1.8 Score=41.54 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=70.6
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCccc---ccCCCCCCCch---hhHhHHHHHHHHHHHHHhCCcceEEEeCCC
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQV---NDRTDEYGGSL---ENRCRFALEVVEAVVREIGAERVGMRLSPY 235 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~---N~R~D~yGgs~---enr~r~~~eii~aiR~~vg~~~i~vrls~~ 235 (367)
.+-+..|++||.|+|....-. ...++||.. .... .||-++ -.+..+-.|-++.+++.+...-|.+=-+++
T Consensus 47 ~~li~~Ak~aGAdavKfQ~~k---~~tl~s~~~~~fq~~~-~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stpf 122 (385)
T 1vli_A 47 FALIDAAAEAGADAVKFQMFQ---ADRMYQKDPGLYKTAA-GKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVC 122 (385)
T ss_dssp HHHHHHHHHHTCSEEEECCBC---GGGGTSCCC----------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBCC
T ss_pred HHHHHHHHHhCCCEEeeeeec---cCcccCcchhhhccCC-CCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEccC
Confidence 444555678999999976533 345555543 1111 232122 222234445555555554221111111332
Q ss_pred ccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHH---HHHHH
Q 017733 236 AECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDE---GNKAV 311 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~~~L 311 (367)
+. .-++.|++.++|.+-|..+... +..+++.+.+ .+.||+.+-|. |.++ |.++|
T Consensus 123 ----------D~----~svd~l~~~~vd~~KIgS~~~~-------N~pLL~~va~-~gKPViLStGmaTl~Ei~~Ave~i 180 (385)
T 1vli_A 123 ----------DE----GSADLLQSTSPSAFKIASYEIN-------HLPLLKYVAR-LNRPMIFSTAGAEISDVHEAWRTI 180 (385)
T ss_dssp ----------SH----HHHHHHHTTCCSCEEECGGGTT-------CHHHHHHHHT-TCSCEEEECTTCCHHHHHHHHHHH
T ss_pred ----------CH----HHHHHHHhcCCCEEEECccccc-------CHHHHHHHHh-cCCeEEEECCCCCHHHHHHHHHHH
Confidence 11 1334466788999888655332 4456666665 57899999888 7654 55666
Q ss_pred HcCCC-cEEcc
Q 017733 312 AANYT-DLVAF 321 (367)
Q Consensus 312 ~~G~~-D~V~~ 321 (367)
....+ +++.+
T Consensus 181 ~~~Gn~~iiLl 191 (385)
T 1vli_A 181 RAEGNNQIAIM 191 (385)
T ss_dssp HTTTCCCEEEE
T ss_pred HHCCCCcEEEE
Confidence 65545 66554
No 437
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=90.98 E-value=0.57 Score=41.20 Aligned_cols=79 Identities=15% Similarity=0.079 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHH
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l 326 (367)
+++..+++.+.+.|++.+.+...+ +...+.++.+++.++..+++.|-+ +.++++.+++.| +|+|..+.
T Consensus 28 ~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aG-Ad~v~~p~--- 96 (214)
T 1wbh_A 28 EHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG-AQFAISPG--- 96 (214)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHT-CSCEEESS---
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcC-CCEEEcCC---
Confidence 456788999999999999986431 123456777888887666666666 899999999999 99998873
Q ss_pred hCCchHHHHHh
Q 017733 327 ANPDLPKRFEL 337 (367)
Q Consensus 327 adP~l~~k~~~ 337 (367)
.|++..+..+.
T Consensus 97 ~d~~v~~~~~~ 107 (214)
T 1wbh_A 97 LTEPLLKAATE 107 (214)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 56666555443
No 438
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=90.78 E-value=0.44 Score=43.59 Aligned_cols=72 Identities=14% Similarity=0.006 Sum_probs=55.4
Q ss_pred HHHHHHhhhcCccEEEEec-CCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHHhC
Q 017733 251 LYMAKALNKFKLLYLHVIE-PRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFLAN 328 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~-~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~lad 328 (367)
.++++..++.|++.|++.. ..+. . .....++.+++.+++||+.-+.+ ++.+..++...| +|.|.+.-..+.+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f---~--Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~G-AD~VlLi~a~L~~ 155 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSF---Q--GAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWG-ADCILIIMASVDD 155 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTT---C--CCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTT-CSEEEEETTTSCH
T ss_pred HHHHHHHHHCCCCEEEEecccccc---C--CCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcC-CCEEEEcccccCH
Confidence 4588889999999999842 2111 1 13456788999999999987766 888999999999 9999988776643
No 439
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.74 E-value=3.4 Score=38.02 Aligned_cols=153 Identities=15% Similarity=0.069 Sum_probs=84.1
Q ss_pred HHHHHHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+. .+.- + -..|.-.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 25 ~~sA~~~~~aG~~ai~vs~~~~a~~----~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~PviaD~d~------ 84 (290)
T 2hjp_A 25 PLVAKLAEQAGFGGIWGSGFELSAS----Y-----AVPDANILSMS----THLEMMRAIASTVS-IPLIADIDT------ 84 (290)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHHH----T-----TSCTTTCSCHH----HHHHHHHHHHTTCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEEChHHHHHh----C-----CCCCCCCCCHH----HHHHHHHHHHhcCC-CCEEEECCC------
Confidence 56788888999999997642 2210 1 12221111222 23444455555443 367665532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cC----CchhhHHHHHHHH---Hhc-CCcEEEeCCC------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LT----DKSETQRSLLSMR---RAF-EGTFIAAGGY------ 302 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~----~~~~~~~~~~~ir---~~~-~~pvi~~Ggi------ 302 (367)
+.+ ..+.+.+.++.+.++|++.+++-.....+ .. .-.+...+..+|+ ++- ..+....++-
T Consensus 85 -Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~ 162 (290)
T 2hjp_A 85 -GFG-NAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAG 162 (290)
T ss_dssp -TTS-SHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTT
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhcc
Confidence 223 45678888999999999999996553211 00 0112223344444 442 2333333321
Q ss_pred -----CHHHHHHHHHcCCCcEEcccHHH-HhCCchHHHHHhCC
Q 017733 303 -----SRDEGNKAVAANYTDLVAFGRLF-LANPDLPKRFELNA 339 (367)
Q Consensus 303 -----t~~~a~~~L~~G~~D~V~~gR~~-ladP~l~~k~~~g~ 339 (367)
..+.+..+.+.| +|+|.+ .. +.+++..+++.+..
T Consensus 163 ~g~~~ai~Ra~ay~eAG-Ad~i~~--e~~~~~~~~~~~i~~~~ 202 (290)
T 2hjp_A 163 LGQQEAVRRGQAYEEAG-ADAILI--HSRQKTPDEILAFVKSW 202 (290)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEE--CCCCSSSHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHcC-CcEEEe--CCCCCCHHHHHHHHHHc
Confidence 134567788888 999887 33 46678888877653
No 440
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.69 E-value=0.51 Score=45.64 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=48.3
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
+.++.+.++|+|+|.+... .. ......+.++.+++.+++||++.+-.|.++|+.+++.| +|+|.++
T Consensus 147 e~~~~lveaGvdvIvldta-~G---~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~aG-AD~I~vG 212 (400)
T 3ffs_A 147 ERAKLLVEAGVDVIVLDSA-HG---HSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIENG-ADGIKVG 212 (400)
T ss_dssp HHHHHHHHHTCSEEEECCS-CC---SBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCC-CC---CcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHcC-CCEEEEe
Confidence 4677788899999976322 10 11223567788888888888874445899999999999 9999884
No 441
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.59 E-value=2.9 Score=38.30 Aligned_cols=100 Identities=6% Similarity=-0.083 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChHHHHHHHHHHhhh-cCccEEEEecCCccc-c----C-Cch-hhH
Q 017733 211 FALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPEALGLYMAKALNK-FKLLYLHVIEPRMIQ-L----T-DKS-ETQ 282 (367)
Q Consensus 211 ~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~-~Gvd~i~v~~~~~~~-~----~-~~~-~~~ 282 (367)
+..+.++.+|+..+..++++-+... ..+++.+.++.+.+ .|+|+|+++-..... . . ..+ ...
T Consensus 84 ~~~~~~~~~~~~~~~~p~~v~l~~~----------~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~ 153 (311)
T 1ep3_A 84 IMTEKLPWLNENFPELPIIANVAGS----------EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAA 153 (311)
T ss_dssp HHHTHHHHHHHHCTTSCEEEEECCS----------SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEEcCC----------CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHH
Confidence 3344566677643334777766541 35678888998888 899999886432111 0 0 011 124
Q ss_pred HHHHHHHHhcCCcEEEe--CCC-CH-HHHHHHHHcCCCcEEcc
Q 017733 283 RSLLSMRRAFEGTFIAA--GGY-SR-DEGNKAVAANYTDLVAF 321 (367)
Q Consensus 283 ~~~~~ir~~~~~pvi~~--Ggi-t~-~~a~~~L~~G~~D~V~~ 321 (367)
+.++.+++.++.||++- .++ +. +.++.+.+.| +|+|.+
T Consensus 154 eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G-~d~i~v 195 (311)
T 1ep3_A 154 ALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAG-ADGLTM 195 (311)
T ss_dssp HHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcC-CCEEEE
Confidence 56778888888887652 244 44 4477777787 999887
No 442
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.59 E-value=5.6 Score=39.05 Aligned_cols=139 Identities=15% Similarity=0.145 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCc
Q 017733 157 IVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYA 236 (367)
Q Consensus 157 ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~ 236 (367)
+++.|.++ +.++|.|.|.|..+. |. .+-+.+.++.+|+.- . .+.+-++...
T Consensus 101 v~~~~v~~---a~~~Gvd~i~if~~~--------sd----------------~~ni~~~i~~ak~~G-~-~v~~~i~~~~ 151 (464)
T 2nx9_A 101 VVDTFVER---AVKNGMDVFRVFDAM--------ND----------------VRNMQQALQAVKKMG-A-HAQGTLCYTT 151 (464)
T ss_dssp HHHHHHHH---HHHTTCCEEEECCTT--------CC----------------THHHHHHHHHHHHTT-C-EEEEEEECCC
T ss_pred hhHHHHHH---HHhCCcCEEEEEEec--------CH----------------HHHHHHHHHHHHHCC-C-EEEEEEEeee
Confidence 34555544 457899999986543 11 133567777777653 2 2333333221
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC----CCCHHHHHHHHH
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG----GYSRDEGNKAVA 312 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G----git~~~a~~~L~ 312 (367)
. ...+.+.+.++++.+.+.|++.|.+..-.- ..........++.+++.+++||-.=. |.....+..+++
T Consensus 152 ~-----~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G--~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~ 224 (464)
T 2nx9_A 152 S-----PVHNLQTWVDVAQQLAELGVDSIALKDMAG--ILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIE 224 (464)
T ss_dssp C-----TTCCHHHHHHHHHHHHHTTCSEEEEEETTS--CCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHH
T ss_pred C-----CCCCHHHHHHHHHHHHHCCCCEEEEcCCCC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHH
Confidence 1 122578889999999999999998753211 11122234567889988877754322 224677889999
Q ss_pred cCCCcEE-----cccHHHHhCCchHH
Q 017733 313 ANYTDLV-----AFGRLFLANPDLPK 333 (367)
Q Consensus 313 ~G~~D~V-----~~gR~~ladP~l~~ 333 (367)
+| +|.| ++|.. ..||.+-.
T Consensus 225 AG-a~~VD~ti~g~ger-tGN~~lE~ 248 (464)
T 2nx9_A 225 AG-VDRVDTAISSMSGT-YGHPATES 248 (464)
T ss_dssp TT-CSEEEEBCGGGCST-TSCCBHHH
T ss_pred hC-CCEEEEeccccCCC-CcCHHHHH
Confidence 99 7765 45554 56776543
No 443
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.56 E-value=4.6 Score=37.83 Aligned_cols=135 Identities=7% Similarity=-0.013 Sum_probs=83.5
Q ss_pred CCHHhhhhhhHHHHHHHHcCCeeEEcccc---CCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 017733 82 WTKEQVEAWKPIVDAVHQKGGIIFCQIWH---AGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIV 158 (367)
Q Consensus 82 ~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h---~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii 158 (367)
..++.++.+++.++.++++|..+.+.+.+ .++. . .
T Consensus 131 s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~------------------------------~------------~ 168 (337)
T 3ble_A 131 TPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRN------------------------------S------------P 168 (337)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHH------------------------------C------------H
T ss_pred CHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcC------------------------------C------------H
Confidence 34566788899999999999887766644 2110 0 1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAEC 238 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~ 238 (367)
+.+.+.++.+.++|.|.|-|-= ..|.. .+.-+.++|+++|+.+++.+|++ ...+++
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~D-------------------T~G~~---~P~~v~~lv~~l~~~~p~~~i~~--H~Hnd~ 224 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPD-------------------TLGVL---SPEETFQGVDSLIQKYPDIHFEF--HGHNDY 224 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEEC-------------------TTCCC---CHHHHHHHHHHHHHHCTTSCEEE--ECBCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEec-------------------CCCCc---CHHHHHHHHHHHHHhcCCCeEEE--EecCCc
Confidence 4677888888999999888743 33332 24567899999999996445665 433222
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHh
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRA 291 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~ 291 (367)
+.... ..++ ..++|++.++.+-..+....+..+....+..++..
T Consensus 225 -----GlA~A--N~la--Av~aGa~~vd~tv~GlG~~aGN~~~E~lv~~L~~~ 268 (337)
T 3ble_A 225 -----DLSVA--NSLQ--AIRAGVKGLHASINGLGERAGNTPLEALVTTIHDK 268 (337)
T ss_dssp -----SCHHH--HHHH--HHHTTCSEEEEBGGGCSSTTCBCBHHHHHHHHHHH
T ss_pred -----chHHH--HHHH--HHHhCCCEEEEecccccccccchhHHHHHHHHHHh
Confidence 22222 2222 23579999998765554444444444444445544
No 444
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=90.39 E-value=1.8 Score=39.52 Aligned_cols=102 Identities=20% Similarity=0.158 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceE--EEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVG--MRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~--vrls~~~ 236 (367)
++-.+.|.++.++|.++|.|-.+. ...+.|++++++ |- +++ +-+.|-.
T Consensus 106 ~~a~~~a~rl~kaGa~aVklEdg~----------------------------~~~~~i~~l~~~-GI-pv~gHlgltPq~ 155 (275)
T 3vav_A 106 ADAFASAVKLMRAGAQMVKFEGGE----------------------------WLAETVRFLVER-AV-PVCAHVGLTPQS 155 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCG----------------------------GGHHHHHHHHHT-TC-CEEEEEESCGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECCch----------------------------hHHHHHHHHHHC-CC-CEEEecCCCceE
Confidence 455677777777899999987542 236677777764 21 222 2222211
Q ss_pred -----cccccCCC-ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC
Q 017733 237 -----ECAEAVDS-NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG 300 (367)
Q Consensus 237 -----~~~~~~~~-~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G 300 (367)
+|.-.+.. ...+++++=++.++++|+|.|-+- . .+. ..++.|.+.+++|+|+.|
T Consensus 156 ~~~~gg~~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE-~--------vp~-~~a~~It~~l~iP~igIG 215 (275)
T 3vav_A 156 VHAFGGFKVQGKTEAGAAQLLRDARAVEEAGAQLIVLE-A--------VPT-LVAAEVTRELSIPTIGIG 215 (275)
T ss_dssp HHHHC---CCCCSHHHHHHHHHHHHHHHHHTCSEEEEE-S--------CCH-HHHHHHHHHCSSCEEEES
T ss_pred EeccCCeEEEcCCHHHHHHHHHHHHHHHHcCCCEEEec-C--------CCH-HHHHHHHHhCCCCEEEEc
Confidence 11101111 123556677888999999988753 1 112 368889999999998876
No 445
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=90.36 E-value=7.3 Score=35.87 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=87.7
Q ss_pred HHHHHHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+. .+. ..+ -..|.--=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 27 ~~sA~~~~~aG~~ai~vs~~~~a~---~~~-----G~pD~~~vt~~----em~~~~~~I~~~~~-~PviaD~d~------ 87 (295)
T 1xg4_A 27 ANHALLAQRAGYQAIYLSGGGVAA---GSL-----GLPDLGISTLD----DVLTDIRRITDVCS-LPLLVDADI------ 87 (295)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH---TTT-----CCCSSSCSCHH----HHHHHHHHHHHHCC-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEECchHhhh---hhc-----CCCCCCCCCHH----HHHHHHHHHHhhCC-CCEEecCCc------
Confidence 45688888999999997654 211 011 12232111233 34566666666664 377776532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cCC--chhhHHHHHH---HHHhc-CCcEEEeCCCC-------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LTD--KSETQRSLLS---MRRAF-EGTFIAAGGYS------- 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~~--~~~~~~~~~~---ir~~~-~~pvi~~Ggit------- 303 (367)
+.+...+.+.+.++.++++|++.|++-.....+ ..+ -.+....+.+ ++++- ..++...++-+
T Consensus 88 -Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl 166 (295)
T 1xg4_A 88 -GFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGL 166 (295)
T ss_dssp -CSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCH
T ss_pred -ccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCH
Confidence 123245678888999999999999996543111 011 1122233333 34432 34444444431
Q ss_pred ---HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 304 ---RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 304 ---~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
.+.+..+.+.| +|+|.+= .+-+++..+++.+.
T Consensus 167 ~~ai~ra~ay~eAG-Ad~i~~e--~~~~~~~~~~i~~~ 201 (295)
T 1xg4_A 167 DAAIERAQAYVEAG-AEMLFPE--AITELAMYRQFADA 201 (295)
T ss_dssp HHHHHHHHHHHHTT-CSEEEET--TCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CCEEEEe--CCCCHHHHHHHHHH
Confidence 34577788888 9998873 23466777777765
No 446
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=90.36 E-value=1.5 Score=40.05 Aligned_cols=76 Identities=16% Similarity=-0.025 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchh-----------------hHHHHHHHHHh-cCCcEEEeCCCC----
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSE-----------------TQRSLLSMRRA-FEGTFIAAGGYS---- 303 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~-----------------~~~~~~~ir~~-~~~pvi~~Ggit---- 303 (367)
+.+.+.++++.|++.|+|.|++.-+.-.+....+. ..+.++.+|+. .++|++.-+-++
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 36778999999999999999996553222111111 12456778887 788987765432
Q ss_pred --HH-HHHHHHHcCCCcEEccc
Q 017733 304 --RD-EGNKAVAANYTDLVAFG 322 (367)
Q Consensus 304 --~~-~a~~~L~~G~~D~V~~g 322 (367)
.+ -++++.+.| +|.|.+.
T Consensus 112 ~g~~~f~~~~~~aG-vdGvIip 132 (271)
T 3nav_A 112 RGIDDFYQRCQKAG-VDSVLIA 132 (271)
T ss_dssp TCHHHHHHHHHHHT-CCEEEET
T ss_pred HhHHHHHHHHHHCC-CCEEEEC
Confidence 23 367888888 8987773
No 447
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.34 E-value=0.67 Score=46.11 Aligned_cols=67 Identities=15% Similarity=0.097 Sum_probs=50.1
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
.+.++.|.++|+|.|++..... ......+.++.+++.+ +.||++++..+.+.++.+++.| +|+|.++
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aG-aD~I~Vg 300 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAG-VSAVKVG 300 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHT-CSEEEEC
T ss_pred HHHHHHHHhccCceEEeccccc----cchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhC-CCEEEEC
Confidence 4567778888999999864421 1123456788999998 5788875455999999999999 9999764
No 448
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=90.24 E-value=1.7 Score=40.98 Aligned_cols=77 Identities=12% Similarity=0.027 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLF 325 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~ 325 (367)
+.+.+..-+..|+++|+|.+.++-++ ......++.|++.+++|+++---|++..|..+++.| +|.+-+-=+-
T Consensus 44 D~~atv~Qi~~l~~aG~diVRvavp~-------~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G-~dklRINPGN 115 (366)
T 3noy_A 44 DVEATLNQIKRLYEAGCEIVRVAVPH-------KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKG-VHGIRINPGN 115 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS-------HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTT-CSEEEECHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCC-------hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhC-CCeEEECCcc
Confidence 45667778888999999999987552 223467888999999999998788999999999999 9999999998
Q ss_pred HhCCc
Q 017733 326 LANPD 330 (367)
Q Consensus 326 ladP~ 330 (367)
+.+++
T Consensus 116 ig~~~ 120 (366)
T 3noy_A 116 IGKEE 120 (366)
T ss_dssp HSCHH
T ss_pred cCchh
Confidence 87764
No 449
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=90.09 E-value=3.7 Score=39.88 Aligned_cols=133 Identities=18% Similarity=0.151 Sum_probs=72.7
Q ss_pred HHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCC
Q 017733 165 ARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDS 244 (367)
Q Consensus 165 A~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~ 244 (367)
.++|.++|.|.|-|..+. |+. ++.-..+-+.+.=.+.+.++++.+|+. | +-|+++..+.+ .
T Consensus 116 i~~A~~aG~~~V~i~~s~--------Sd~--~~~~~l~~s~~e~l~~~~~~v~~ak~~-G---~~V~~~~eda~-----r 176 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGT--------SQY--LRKYSHGKDMTYIIDSATEVINFVKSK-G---IEVRFSSEDSF-----R 176 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-----------------------CHHHHHHHHHHHHHHTT-T---CEEEEEEESGG-----G
T ss_pred HHHHHHcCCCEEEEEeec--------cHH--HHHHHcCCCHHHHHHHHHHHHHHHHHC-C---CEEEEEEccCc-----C
Confidence 456778999998876544 121 222233434333334445555555543 2 34555553222 2
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeC--CC--CHHHHHHHHHcCCCcEE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAG--GY--SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G--gi--t~~~a~~~L~~G~~D~V 319 (367)
.+.+...++++.+.+.|++.|.+..-. + ...+......++.+++.+++++-.=. .+ ....+..+++.| +|.|
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTv-G-~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aG-a~~v 252 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTV-G-CATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAG-ATHI 252 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETT-S-CCCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCcc-C-cCCHHHHHHHHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhC-CCEE
Confidence 346778899999999999988875321 1 11112234567778888876643221 12 357788999998 7765
No 450
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.92 E-value=7.4 Score=35.49 Aligned_cols=122 Identities=11% Similarity=0.007 Sum_probs=77.3
Q ss_pred CCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 017733 82 WTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDF 161 (367)
Q Consensus 82 ~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f 161 (367)
..++.++..+++++.+|++|..+-.-|.+.+.. |... ...| +.+
T Consensus 114 ~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~--------------e~~~----------~~~~------------~~~ 157 (295)
T 1ydn_A 114 TIAESIERLSPVIGAAINDGLAIRGYVSCVVEC--------------PYDG----------PVTP------------QAV 157 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEE--------------TTTE----------ECCH------------HHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecC--------------CcCC----------CCCH------------HHH
Confidence 345678899999999999998877667653210 0000 0111 455
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
.+.++.+.++|.|.|-|.-.+|+ + .+....++++++|+.++..+|.+-..- +.
T Consensus 158 ~~~~~~~~~~G~d~i~l~Dt~G~-----~-----------------~P~~~~~lv~~l~~~~~~~~l~~H~Hn--~~--- 210 (295)
T 1ydn_A 158 ASVTEQLFSLGCHEVSLGDTIGR-----G-----------------TPDTVAAMLDAVLAIAPAHSLAGHYHD--TG--- 210 (295)
T ss_dssp HHHHHHHHHHTCSEEEEEETTSC-----C-----------------CHHHHHHHHHHHHTTSCGGGEEEEEBC--TT---
T ss_pred HHHHHHHHhcCCCEEEecCCCCC-----c-----------------CHHHHHHHHHHHHHhCCCCeEEEEECC--Cc---
Confidence 66677788899999988655542 1 256789999999999863366664422 11
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCc
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRM 272 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~ 272 (367)
+...+.+. ...++|++.++++-...
T Consensus 211 --Gla~an~l----~Ai~aG~~~vd~sv~Gl 235 (295)
T 1ydn_A 211 --GRALDNIR----VSLEKGLRVFDASVGGL 235 (295)
T ss_dssp --SCHHHHHH----HHHHHTCCEEEEBTTCC
T ss_pred --chHHHHHH----HHHHhCCCEEEeccccC
Confidence 22333322 22357999999876544
No 451
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=89.83 E-value=1.1 Score=45.36 Aligned_cols=87 Identities=11% Similarity=-0.041 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHc--CCCcEEcccH
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAA--NYTDLVAFGR 323 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~--G~~D~V~~gR 323 (367)
..+.+.+.++.+.+.|+|+|+|. +..............+..|++.+++||.. -..+++.++.+|+. | +++|--..
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rvv~~i~~~~~vpisI-DT~~~~v~eaal~~~~G-~~iINdis 414 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKIVQTLPYVSNVPLSL-DIQNVDLTERALRAYPG-RSLFNSAK 414 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHHHHHHHHHTCSCEEE-ECCCHHHHHHHHHHCSS-CCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHhhCCceEEE-eCCCHHHHHHHHHhcCC-CCEEEECC
Confidence 34678888999999999999996 22211112222334566677777778655 44579999999998 8 78886655
Q ss_pred HHHhC--CchHHHHH
Q 017733 324 LFLAN--PDLPKRFE 336 (367)
Q Consensus 324 ~~lad--P~l~~k~~ 336 (367)
+.- | |.+..-++
T Consensus 415 ~~~-~~~~~~~~~~~ 428 (566)
T 1q7z_A 415 VDE-EELEMKINLLK 428 (566)
T ss_dssp SCH-HHHHHHHHHHH
T ss_pred cch-hhHHHHHHHHH
Confidence 543 4 55554444
No 452
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=89.81 E-value=7 Score=35.89 Aligned_cols=125 Identities=17% Similarity=0.082 Sum_probs=79.6
Q ss_pred CCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 017733 81 IWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVND 160 (367)
Q Consensus 81 ~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~ 160 (367)
..-++.++..+++++.+|++|..+-.-|.+... .+ .. + ...| +.
T Consensus 117 ~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~--~e---------~~-----------~--~~~~------------~~ 160 (302)
T 2ftp_A 117 CSIKDSLERFVPVLEAARQHQVRVRGYISCVLG--CP---------YD-----------G--DVDP------------RQ 160 (302)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTC--BT---------TT-----------B--CCCH------------HH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEee--CC---------cC-----------C--CCCH------------HH
Confidence 345678899999999999999988777765311 00 00 0 1112 35
Q ss_pred HHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 161 FRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 161 f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+.+.++.+.++|.|.|-|--.+|+ + .+....++|+++|+.++..+|++=.. ++.
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~-----~-----------------~P~~~~~lv~~l~~~~~~~~l~~H~H--n~~-- 214 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGV-----G-----------------TAGATRRLIEAVASEVPRERLAGHFH--DTY-- 214 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSC-----C-----------------CHHHHHHHHHHHTTTSCGGGEEEEEB--CTT--
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC-----c-----------------CHHHHHHHHHHHHHhCCCCeEEEEeC--CCc--
Confidence 666677778999999988655553 1 25678999999999986336665332 111
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ 274 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~ 274 (367)
+...+.+. ...++|++.++.+-..++.
T Consensus 215 ---Gla~An~l----aAv~aGa~~vd~tv~GlG~ 241 (302)
T 2ftp_A 215 ---GQALANIY----ASLLEGIAVFDSSVAGLGG 241 (302)
T ss_dssp ---SCHHHHHH----HHHHTTCCEEEEBGGGCCB
T ss_pred ---cHHHHHHH----HHHHhCCCEEEecccccCC
Confidence 22333222 2235799999987655443
No 453
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=89.77 E-value=0.73 Score=43.70 Aligned_cols=50 Identities=18% Similarity=0.320 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCcEEEeCCCC--HHHHHHHHHcCCCc------EEcccHHHHhCCchHH
Q 017733 283 RSLLSMRRAFEGTFIAAGGYS--RDEGNKAVAANYTD------LVAFGRLFLANPDLPK 333 (367)
Q Consensus 283 ~~~~~ir~~~~~pvi~~Ggit--~~~a~~~L~~G~~D------~V~~gR~~ladP~l~~ 333 (367)
..++.||+..+.-++.+.|+. -.+.+++++.| +| +|.+||+.+.-++...
T Consensus 278 ~el~~IR~~~~~~~iLtPGIgaqGGD~~~a~~~G-ad~~~~~~iIvVGR~I~~A~dp~~ 335 (353)
T 2ffc_A 278 DEIKKIRELFPDCYILAPGVGAQKGDLRKMLCNG-YSKNYEKVLINVGRAITKSGSPQQ 335 (353)
T ss_dssp HHHHHHHHHCTTCCEEECCBSTTCBCHHHHHHHH-CCSSGGGEEEEECHHHHTSSCHHH
T ss_pred HHHHHHHHhCCCCeEEeCcccCCCCCHHHHHHcC-CCcccCcEEEEECHHHcCCCCHHH
Confidence 345668877654344456652 12345666677 66 9999999997776433
No 454
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=89.69 E-value=2.8 Score=37.62 Aligned_cols=75 Identities=11% Similarity=-0.064 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhcCccEEEEecCCccccCCc-----------------hhhHHHHHHHHHhcCCcEEEeCCCCHHH---
Q 017733 247 EALGLYMAKALNKFKLLYLHVIEPRMIQLTDK-----------------SETQRSLLSMRRAFEGTFIAAGGYSRDE--- 306 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~-----------------~~~~~~~~~ir~~~~~pvi~~Ggit~~~--- 306 (367)
.+++.++++.+++.|+|+|++..+...+.... ......++.+|+.+++||+.....++..
T Consensus 31 ~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~~~~~ 110 (262)
T 1rd5_A 31 LATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMFRS 110 (262)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHHHSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHHH
Confidence 46788899999999999999954422111100 1123456778888889988765444422
Q ss_pred HHHHHHcCCCcEEccc
Q 017733 307 GNKAVAANYTDLVAFG 322 (367)
Q Consensus 307 a~~~L~~G~~D~V~~g 322 (367)
.+.+.+.| +|.|.+.
T Consensus 111 ~~~a~~aG-adgv~v~ 125 (262)
T 1rd5_A 111 LAKMKEAG-VHGLIVP 125 (262)
T ss_dssp THHHHHTT-CCEEECT
T ss_pred HHHHHHcC-CCEEEEc
Confidence 34578888 8988774
No 455
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.56 E-value=1.2 Score=42.28 Aligned_cols=65 Identities=11% Similarity=0.169 Sum_probs=45.5
Q ss_pred HHHHhhhc--CccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEccc
Q 017733 253 MAKALNKF--KLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 253 l~~~L~~~--Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~g 322 (367)
.++.+.+. |++.+.++... . ......+.++.+|+.+ ++||++.+..|+++|+.+++.| +|+|.++
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~-g---~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aG-aD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVAN-G---YSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSG-ADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSC-T---TBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTT-CSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecC-C---CcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhC-CCEEEEC
Confidence 44445555 88987765321 1 1122456788899998 6888875556999999999999 9999553
No 456
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=89.52 E-value=0.97 Score=41.85 Aligned_cols=91 Identities=10% Similarity=0.038 Sum_probs=62.8
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCc-c--ccCCchh----hHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRM-I--QLTDKSE----TQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTD 317 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~-~--~~~~~~~----~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 317 (367)
...+.+.+.++++.+.|+|+|+|..-+. . ...+... ....++.+++.+++||.. -..+++.++.+|+.| +|
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSI-DT~~~~V~~aAl~aG-a~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISI-DTYKAEVAKQAIEAG-AH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEE-ECSCHHHHHHHHHHT-CC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEE-eCCCHHHHHHHHHcC-CC
Confidence 3567788899999999999999954221 1 0111111 122346677777777644 456899999999998 89
Q ss_pred EEcccHHHHhCCchHHHHHh
Q 017733 318 LVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 318 ~V~~gR~~ladP~l~~k~~~ 337 (367)
+|--..+.-.||++..-+++
T Consensus 138 iINdvsg~~~d~~m~~~aa~ 157 (297)
T 1tx2_A 138 IINDIWGAKAEPKIAEVAAH 157 (297)
T ss_dssp EEEETTTTSSCTHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHH
Confidence 99888887778988766554
No 457
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=89.52 E-value=3 Score=38.93 Aligned_cols=120 Identities=17% Similarity=0.133 Sum_probs=67.4
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCc-hhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGS-LENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs-~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
++.|+.+.++|+++|-... | ..+-...+||+ +.+. .+.|++||+++. -||..|....
T Consensus 27 ~e~A~~ae~aGA~aI~~l~-----------~-v~~d~~~~~G~arm~~----p~~i~~I~~av~-iPV~~K~rig----- 84 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALE-----------R-VPADIRAAGGVARMSD----PALIEEIMDAVS-IPVMAKCRIG----- 84 (330)
T ss_dssp HHHHHHHHHHTCSEEEECS-----------S-CHHHHC--CCCCCCCC----HHHHHHHHHHCS-SCEEEEEETT-----
T ss_pred HHHHHHHHHcCCCEEEecC-----------C-ccccccCCcchhhcCC----HHHHHHHHHhcC-CCeEEEEeec-----
Confidence 6689999999999994321 1 22333455673 3333 455666677773 4777766541
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEc
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~ 320 (367)
+ .+ -++.+++.|+|+|..+..- .+ ... .....|+.++.|+++ +--+..++...+.+| +|+|.
T Consensus 85 --~---~~----e~qilea~GaD~Id~s~~l-~p-~d~-----~~~i~k~~~~~~~~~-~a~~lgea~r~~~~G-a~~i~ 146 (330)
T 2yzr_A 85 --H---TT----EALVLEAIGVDMIDESEVL-TQ-ADP-----FFHIYKKKFNVPFVC-GARNLGEAVRRIWEG-AAMIR 146 (330)
T ss_dssp --C---HH----HHHHHHHTTCSEEEEETTS-CC-SCS-----SCCCCGGGCSSCEEE-ECSSHHHHHHHHHHT-CSEEE
T ss_pred --c---hH----HHHHHHHcCCCEEehhccC-CH-HHH-----HHHhhhhhcccchhh-ccccHHHHHHHHhcC-cceee
Confidence 1 22 3455677999999754321 10 000 001124455666665 333677777777787 77776
Q ss_pred c
Q 017733 321 F 321 (367)
Q Consensus 321 ~ 321 (367)
.
T Consensus 147 t 147 (330)
T 2yzr_A 147 T 147 (330)
T ss_dssp E
T ss_pred c
Confidence 4
No 458
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=89.19 E-value=1.8 Score=39.39 Aligned_cols=103 Identities=10% Similarity=0.033 Sum_probs=62.3
Q ss_pred EeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccC----CchhhH----HHHHHHHHhcCCcEEEeCCC
Q 017733 231 RLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLT----DKSETQ----RSLLSMRRAFEGTFIAAGGY 302 (367)
Q Consensus 231 rls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~----~~~~~~----~~~~~ir~~~~~pvi~~Ggi 302 (367)
=+.|+. |.+.+.....+.+..-++.+.+.|+|+|+|..-+. .|. +..... ..++.+++ .+ .++..--+
T Consensus 14 NvTPDS-FsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeST-RPga~~vs~eeE~~Rv~pvi~~l~~-~~-v~iSIDT~ 89 (270)
T 4hb7_A 14 NVTPDS-FSDGGKFNNVETAINRVKAMIDEGADIIDVGGVST-RPGHEMVTLEEELNRVLPVVEAIVG-FD-VKISVDTF 89 (270)
T ss_dssp ECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCC-STTCCCCCHHHHHHHHHHHHHHHTT-SS-SEEEEECS
T ss_pred eCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccC-CCCCCCCchHHHHHHHHHHHHHhhc-CC-CeEEEECC
Confidence 334533 43334345678888889999999999999843211 111 111111 12333332 12 35555666
Q ss_pred CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 303 SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 303 t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
.++.|+.+|+.| +|+|==-.+...||++..-+.+-
T Consensus 90 ~~~Va~~al~aG-a~iINDVs~g~~d~~m~~~va~~ 124 (270)
T 4hb7_A 90 RSEVAEACLKLG-VDMINDQWAGLYDHRMFQIVAKY 124 (270)
T ss_dssp CHHHHHHHHHHT-CCEEEETTTTSSCTHHHHHHHHT
T ss_pred CHHHHHHHHHhc-cceeccccccccchhHHHHHHHc
Confidence 899999999999 89998777888999998887764
No 459
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=89.19 E-value=13 Score=34.96 Aligned_cols=142 Identities=13% Similarity=0.065 Sum_probs=91.7
Q ss_pred hhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Q 017733 87 VEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAAR 166 (367)
Q Consensus 87 ~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~ 166 (367)
.++++.|.+.+++.|..++--.+ + .+++.
T Consensus 90 ~e~~~~L~~~~~~~Gi~~~st~~----------------------------------------d-----------~~svd 118 (349)
T 2wqp_A 90 EEDEIKLKEYVESKGMIFISTLF----------------------------------------S-----------RAAAL 118 (349)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC----------------------------------------S-----------HHHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEeeC----------------------------------------C-----------HHHHH
Confidence 47899999999999977773331 1 34556
Q ss_pred HHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCCh
Q 017733 167 NAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNP 246 (367)
Q Consensus 167 ~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~ 246 (367)
.+.+.|.|.++|-++. .+| +.+|+++-+. | .||.++-.. . +
T Consensus 119 ~l~~~~v~~~KI~S~~----------~~n-----------------~~LL~~va~~-g-kPviLstGm---------a-t 159 (349)
T 2wqp_A 119 RLQRMDIPAYKIGSGE----------CNN-----------------YPLIKLVASF-G-KPIILSTGM---------N-S 159 (349)
T ss_dssp HHHHHTCSCEEECGGG----------TTC-----------------HHHHHHHHTT-C-SCEEEECTT---------C-C
T ss_pred HHHhcCCCEEEECccc----------ccC-----------------HHHHHHHHhc-C-CeEEEECCC---------C-C
Confidence 6667899999997654 122 4556666552 3 377775543 2 5
Q ss_pred HHHHHHHHHHhhhcCccEEEEe-cCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCC-CHHHHHHHHHcCCCcEEc
Q 017733 247 EALGLYMAKALNKFKLLYLHVI-EPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGY-SRDEGNKAVAANYTDLVA 320 (367)
Q Consensus 247 ~~~~~~l~~~L~~~Gvd~i~v~-~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~ 320 (367)
+++....++.+.+.|.+.+-++ ..+|..+ ....++..+..+|+.+ ..||.-++-- ....+..+++.| +|+|-
T Consensus 160 ~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~-~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAvAlG-A~iIE 234 (349)
T 2wqp_A 160 IESIKKSVEIIREAGVPYALLHCTNIYPTP-YEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALG-GSILE 234 (349)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCSSCC-GGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHHHT-CCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccCCCCCC-hhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHHHhC-CCEEE
Confidence 7777777888887775543332 1223211 2223567788899999 7898654322 367778888888 77664
No 460
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=89.12 E-value=0.95 Score=44.84 Aligned_cols=67 Identities=10% Similarity=0.080 Sum_probs=50.3
Q ss_pred HHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 250 GLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 250 ~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
+.+.++.+.++|+|.+.++... . ......+.++.+++.+ +.||+..+..++++++.+.+.| +|+|.+
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~-G---~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G-~d~I~v 305 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH-G---HSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAG-ADAVKV 305 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC-C---SSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHHhCCCEEEEEecC-C---chHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcC-CCEEEE
Confidence 3456777888999999875321 1 1123456788999998 5888876667999999999999 999977
No 461
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=89.01 E-value=2.2 Score=37.43 Aligned_cols=117 Identities=15% Similarity=0.089 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
++.+.++.+.++|.|.|++-..-| .|. | |.+ +..++++++|+.++.. .+.+.++.
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg----~f~-~--~~~-------------~~~~~i~~l~~~~~~~~~v~l~vnd---- 79 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDG----RFV-P--NIT-------------IGPLVVDSLRPITDLPLDVHLMIVE---- 79 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBS----SSS-S--CBC-------------CCHHHHHHHGGGCCSCEEEEEESSS----
T ss_pred HHHHHHHHHHHCCCCEEEEeeccC----Ccc-c--ccc-------------cCHHHHHHHHhccCCcEEEEEEecC----
Confidence 456777788889999999865333 121 1 211 2268889999887421 34443332
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecC--CccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCC
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEP--RMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANY 315 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~--~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~ 315 (367)
+ + ..++.+.++|+|++++|.. .. ......++.+++. +..++..-.- |+.+..+.+..+
T Consensus 80 -------~-~---~~v~~~~~~Gad~v~vh~~~~~~------~~~~~~~~~~~~~-g~~ig~~~~p~t~~e~~~~~~~~- 140 (230)
T 1rpx_A 80 -------P-D---QRVPDFIKAGADIVSVHCEQSST------IHLHRTINQIKSL-GAKAGVVLNPGTPLTAIEYVLDA- 140 (230)
T ss_dssp -------H-H---HHHHHHHHTTCSEEEEECSTTTC------SCHHHHHHHHHHT-TSEEEEEECTTCCGGGGTTTTTT-
T ss_pred -------H-H---HHHHHHHHcCCCEEEEEecCccc------hhHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHhh-
Confidence 2 2 3455556789999998743 21 1123455666654 4443333212 444444444455
Q ss_pred CcEE
Q 017733 316 TDLV 319 (367)
Q Consensus 316 ~D~V 319 (367)
+|+|
T Consensus 141 ~d~v 144 (230)
T 1rpx_A 141 VDLV 144 (230)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 8999
No 462
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.79 E-value=1.3 Score=39.24 Aligned_cols=123 Identities=15% Similarity=0.119 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+..+.+.++|.|.|+|-..-| .|. | | ..+..++++++|+.+. .++.+.+-.+
T Consensus 18 ~l~~~i~~~~~~Gad~ihldi~DG----~fv-p--~-------------~~~g~~~v~~lr~~~~-~~~~vhlmv~---- 72 (230)
T 1tqj_A 18 RLGEEIKAVDEAGADWIHVDVMDG----RFV-P--N-------------ITIGPLIVDAIRPLTK-KTLDVHLMIV---- 72 (230)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBS----SSS-S--C-------------BCBCHHHHHHHGGGCC-SEEEEEEESS----
T ss_pred HHHHHHHHHHHcCCCEEEEEEEec----CCC-c--c-------------hhhhHHHHHHHHhhcC-CcEEEEEEcc----
Confidence 456777888899999988776433 122 1 2 1223689999998873 2444433321
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEE
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLV 319 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V 319 (367)
++ + .+++.+.++|+|+++++..... . ......++.+++.=....+...--|+.+..+.+..+ +|+|
T Consensus 73 -----dp-~---~~i~~~~~aGadgv~vh~e~~~---~-~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~-~D~v 138 (230)
T 1tqj_A 73 -----EP-E---KYVEDFAKAGADIISVHVEHNA---S-PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPV-CDLI 138 (230)
T ss_dssp -----SG-G---GTHHHHHHHTCSEEEEECSTTT---C-TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGG-CSEE
T ss_pred -----CH-H---HHHHHHHHcCCCEEEECccccc---c-hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhc-CCEE
Confidence 12 1 2445667789999998743000 0 112245566665422233333222666665555565 8999
Q ss_pred cc
Q 017733 320 AF 321 (367)
Q Consensus 320 ~~ 321 (367)
.+
T Consensus 139 ~~ 140 (230)
T 1tqj_A 139 LI 140 (230)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 463
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=88.77 E-value=3.3 Score=38.88 Aligned_cols=68 Identities=13% Similarity=0.129 Sum_probs=45.3
Q ss_pred HHHhhhcCccEEEEecCCccc---cCCchh---hHHHHHHHHHhcCCcEEEeC---CCCHHHHHHHHHcCCCcEEccc
Q 017733 254 AKALNKFKLLYLHVIEPRMIQ---LTDKSE---TQRSLLSMRRAFEGTFIAAG---GYSRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 254 ~~~L~~~Gvd~i~v~~~~~~~---~~~~~~---~~~~~~~ir~~~~~pvi~~G---git~~~a~~~L~~G~~D~V~~g 322 (367)
.+.++..|+|+|.++...... +...+. ..+.++.+++.+++||+.=+ +++++++..+.+.| +|+|.+.
T Consensus 133 ~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~~~~a~~a~~~G-ad~I~v~ 209 (349)
T 1p0k_A 133 KEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAG-AAAVDIG 209 (349)
T ss_dssp HHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCCCHHHHHHHHHHT-CSEEEEE
T ss_pred HHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCCCHHHHHHHHHcC-CCEEEEc
Confidence 344666789998776432211 111111 34567889999999988743 35899999999999 9998884
No 464
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.75 E-value=6.3 Score=35.44 Aligned_cols=151 Identities=13% Similarity=0.067 Sum_probs=85.4
Q ss_pred HHHHHHHHHhCCCEEEEec-ccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHG-ANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~-~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+-. +.+. .+ -..|.-.=+++ -.+..+++|++.+. -+|.+.+--
T Consensus 30 ~~sA~~~~~aG~dai~vg~~s~a~----~~-----G~pD~~~vt~~----em~~~~~~I~r~~~-~pviaD~~~------ 89 (255)
T 2qiw_A 30 TWSAGLVEEAGFSGLTIGSHPVAD----AT-----GSSDGENMNFA----DYMAVVKKITSAVS-IPVSVDVES------ 89 (255)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH----HT-----TCCTTTCSCHH----HHHHHHHHHHHHCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEEChHHHHH----hC-----CCCCCCCcCHH----HHHHHHHHHHhcCC-CCEEeccCC------
Confidence 4567788889999999764 2321 11 12221111222 34556666666664 377776632
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc---cCCchhhHHHHHHHHHh---cCCcEEEeCCCC-----------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ---LTDKSETQRSLLSMRRA---FEGTFIAAGGYS----------- 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~---~~~~~~~~~~~~~ir~~---~~~pvi~~Ggit----------- 303 (367)
+.+++. .+.++++.+.|++.+++-.+.... ..+.......++.++++ ..+|+..+++.+
T Consensus 90 -Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~ 165 (255)
T 2qiw_A 90 -GYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFED 165 (255)
T ss_dssp -CTTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSS
T ss_pred -CcCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchH
Confidence 122333 567778888999999985443111 01111222334444443 246755554431
Q ss_pred -----HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCC
Q 017733 304 -----RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNA 339 (367)
Q Consensus 304 -----~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~ 339 (367)
.+.+..+.+.| +|.|.+ ..+.+++..+++.+.-
T Consensus 166 ~~~~ai~ra~a~~eAG-Ad~i~~--e~~~~~~~~~~i~~~~ 203 (255)
T 2qiw_A 166 PMVEAIKRIKLMEQAG-ARSVYP--VGLSTAEQVERLVDAV 203 (255)
T ss_dssp HHHHHHHHHHHHHHHT-CSEEEE--CCCCSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcC-CcEEEE--cCCCCHHHHHHHHHhC
Confidence 23567777888 999888 4456668888888764
No 465
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.75 E-value=4.9 Score=36.19 Aligned_cols=134 Identities=13% Similarity=0.081 Sum_probs=81.4
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh---CCc-ceEEEeCCCcc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI---GAE-RVGMRLSPYAE 237 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v---g~~-~i~vrls~~~~ 237 (367)
.+.+++..++|.+||.|-.+.. .. |..+.. ..-..+.|++++++. |.+ .|.-|....
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~----------~~------~k~l~~-~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~-- 156 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVH----------SE------GKRVRE-AQEHADYIAAARQAADVAGVDVVINGRTDAV-- 156 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEG----------GG------TTEECC-HHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--
T ss_pred HHHHHHHHHcCCcEEEECCCCC----------CC------CCcccC-HHHHHHHHHHHHHHHHhcCCCeEEEEEechh--
Confidence 6777778889999999987631 00 112111 123456666666663 333 355566431
Q ss_pred ccccCC-CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEe--CCC-CH-HHHHHHHH
Q 017733 238 CAEAVD-SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAA--GGY-SR-DEGNKAVA 312 (367)
Q Consensus 238 ~~~~~~-~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~--Ggi-t~-~~a~~~L~ 312 (367)
..+... .+..+++++=++.++++|+|.|-+.. .+....++.|.+.+++|+..+ ++- || -..+++-+
T Consensus 157 ~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~~e~---------~~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~ 227 (255)
T 2qiw_A 157 KLGADVFEDPMVEAIKRIKLMEQAGARSVYPVG---------LSTAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLAG 227 (255)
T ss_dssp HHCTTTSSSHHHHHHHHHHHHHHHTCSEEEECC---------CCSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHHH
T ss_pred hccCCcchHHHHHHHHHHHHHHHcCCcEEEEcC---------CCCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHHH
Confidence 111110 12467888889999999999887631 123456888999999985554 222 33 23566777
Q ss_pred cCCCcEEcccHH
Q 017733 313 ANYTDLVAFGRL 324 (367)
Q Consensus 313 ~G~~D~V~~gR~ 324 (367)
-| +..|+.+-.
T Consensus 228 lG-v~~v~~~~~ 238 (255)
T 2qiw_A 228 LG-VRRVTFGPL 238 (255)
T ss_dssp TT-CCEEECTTH
T ss_pred cC-CCEEEEHHH
Confidence 78 889988765
No 466
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=88.69 E-value=1.4 Score=41.02 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=64.2
Q ss_pred eCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCc-h---h----hHHHHHHHHHhcCCcEEEeCCCC
Q 017733 232 LSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDK-S---E----TQRSLLSMRRAFEGTFIAAGGYS 303 (367)
Q Consensus 232 ls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~-~---~----~~~~~~~ir~~~~~pvi~~Ggit 303 (367)
+.|+ -|.+.+.....+.+.+.++.+.+.|+|+|+|-.-+. .+... . . ....++.|++.+++|| ..--+.
T Consensus 18 vTPD-SFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeST-rPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpi-SIDT~~ 94 (314)
T 2vef_A 18 VTPD-SFSDGGQFFALEQALQQARKLIAEGASMLDIGGEST-RPGSSYVEIEEEIQRVVPVIKAIRKESDVLI-SIDTWK 94 (314)
T ss_dssp CCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC------CHHHHHHHHHHHHHHHHHHHHHCCCEE-EEECSC
T ss_pred CCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcC-CCCCCCCCHHHHHHHHHHHHHHHHhhCCceE-EEeCCC
Confidence 3453 243333345678888999999999999999854211 11110 0 1 1234556777666664 445568
Q ss_pred HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 304 RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 304 ~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
++.++.+|+.| +|+|-=..++..||++..-+++
T Consensus 95 ~~Va~aAl~aG-a~iINDVsg~~~d~~m~~v~a~ 127 (314)
T 2vef_A 95 SQVAEAALAAG-ADLVNDITGLMGDEKMPHVVAE 127 (314)
T ss_dssp HHHHHHHHHTT-CCEEEETTTTCSCTTHHHHHHH
T ss_pred HHHHHHHHHcC-CCEEEECCCCCCChHHHHHHHH
Confidence 99999999998 8999888888788988776554
No 467
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=88.67 E-value=0.98 Score=39.84 Aligned_cols=120 Identities=16% Similarity=0.106 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECA 239 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~ 239 (367)
++.+.++.+.++|.|.|++-.-.| .|. | | ..+..++++++|+.+. .++.+-+-.+
T Consensus 20 ~l~~~i~~~~~~Gad~i~l~i~Dg----~fv-~--~-------------~~~~~~~~~~lr~~~~-~~~~v~lmv~---- 74 (228)
T 1h1y_A 20 NLAAEADRMVRLGADWLHMDIMDG----HFV-P--N-------------LTIGAPVIQSLRKHTK-AYLDCHLMVT---- 74 (228)
T ss_dssp GHHHHHHHHHHTTCSEEEEEEEBS----SSS-S--C-------------BCBCHHHHHHHHTTCC-SEEEEEEESS----
T ss_pred HHHHHHHHHHHcCCCEEEEEEecC----CcC-c--c-------------hhhCHHHHHHHHhhcC-CcEEEEEEec----
Confidence 456777788899999988765333 121 1 1 1223689999998873 3433333221
Q ss_pred ccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhh-HHHHHHHHHhcCCcEEEeCC-CCHHH-HHHHHHc--C
Q 017733 240 EAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSET-QRSLLSMRRAFEGTFIAAGG-YSRDE-GNKAVAA--N 314 (367)
Q Consensus 240 ~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~-~~~~~~ir~~~~~pvi~~Gg-it~~~-a~~~L~~--G 314 (367)
++. ++++.+.+.|+|++++|.... ... ...++.+++. ...++..=. -|+.+ .+.++.. +
T Consensus 75 -----d~~----~~i~~~~~agad~v~vH~~~~------~~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~~~~~~ 138 (228)
T 1h1y_A 75 -----NPS----DYVEPLAKAGASGFTFHIEVS------RDNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLVEAENP 138 (228)
T ss_dssp -----CGG----GGHHHHHHHTCSEEEEEGGGC------TTTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHHHSSSC
T ss_pred -----CHH----HHHHHHHHcCCCEEEECCCCc------ccHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHHhcCCC
Confidence 121 134445558999998875421 112 3456667665 444333222 25444 4455542 5
Q ss_pred CCcEEcc
Q 017733 315 YTDLVAF 321 (367)
Q Consensus 315 ~~D~V~~ 321 (367)
+|+|.+
T Consensus 139 -~d~vl~ 144 (228)
T 1h1y_A 139 -VELVLV 144 (228)
T ss_dssp -CSEEEE
T ss_pred -CCEEEE
Confidence 899977
No 468
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.54 E-value=9.1 Score=34.52 Aligned_cols=123 Identities=17% Similarity=0.132 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC--CchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCc
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG--GSLENRCRFALEVVEAVVREIGAERVGMRLSPYA 236 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG--gs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~ 236 (367)
+...+-|++++++|+|.|.... | .| ||-.|+ |.. .--+++++++++..|= ++.. .+.+
T Consensus 37 e~a~~~a~~l~~~Ga~~vk~~~--------f-kp----rts~~~~~g~~----~egl~~l~~~~~~~Gl-~~~t--e~~d 96 (262)
T 1zco_A 37 EQIMKVAEFLAEVGIKVLRGGA--------F-KP----RTSPYSFQGYG----EKALRWMREAADEYGL-VTVT--EVMD 96 (262)
T ss_dssp HHHHHHHHHHHHTTCCEEECBS--------S-CC----CSSTTSCCCCT----HHHHHHHHHHHHHHTC-EEEE--ECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEEe--------c-cc----CCCcccccCcc----HHHHHHHHHHHHHcCC-cEEE--eeCC
Confidence 4556667778889999998543 2 34 443343 432 2234555566666652 3332 2211
Q ss_pred cccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC--CHHHHHHHH---
Q 017733 237 ECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY--SRDEGNKAV--- 311 (367)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi--t~~~a~~~L--- 311 (367)
... ++.+.+. +|++-+..+... +...++.+.+ ++.||+..-|. |++++..++
T Consensus 97 -------~~~-------~~~l~~~-vd~~kIga~~~~-------n~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i 153 (262)
T 1zco_A 97 -------TRH-------VELVAKY-SDILQIGARNSQ-------NFELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYI 153 (262)
T ss_dssp -------GGG-------HHHHHHH-CSEEEECGGGTT-------CHHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHH
T ss_pred -------HHh-------HHHHHhh-CCEEEECccccc-------CHHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHH
Confidence 111 2234455 888888655332 3345565555 68898888775 777655444
Q ss_pred -HcCCCcEEcccHH
Q 017733 312 -AANYTDLVAFGRL 324 (367)
Q Consensus 312 -~~G~~D~V~~gR~ 324 (367)
..|.-+++.+=|+
T Consensus 154 ~~~Gn~~i~L~~RG 167 (262)
T 1zco_A 154 MAQGNENVILCERG 167 (262)
T ss_dssp HTTTCCCEEEEECC
T ss_pred HHCCCCeEEEEECC
Confidence 3454477777766
No 469
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=88.49 E-value=5.1 Score=37.88 Aligned_cols=146 Identities=8% Similarity=-0.065 Sum_probs=77.7
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHH----HHHHHHHHHHHhC--CcceEEEeCCC
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRF----ALEVVEAVVREIG--AERVGMRLSPY 235 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~----~~eii~aiR~~vg--~~~i~vrls~~ 235 (367)
.+..+.+..+||-+|++..--. -.|--+|. .|.-++-..+-||+-| +..+++.+++... ..+|.+-|..
T Consensus 61 ~e~~~~l~~~G~G~v~~ktvt~--~pq~GNp~--PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI~G- 135 (354)
T 4ef8_A 61 TEELVAMTESASGSLVSKSCTP--ALREGNPT--PRYQALPLGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSMSG- 135 (354)
T ss_dssp HHHHHHHHHSSCSCEEEEEECS--SCBCCSCS--CCEEEETTEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEECC-
T ss_pred HHHHHHHHHcCCCeEEeCcccC--cccCCCCC--CcEEecchhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEecc-
Confidence 4555666778999999875320 00111111 1211111222333211 3444555554321 2377776643
Q ss_pred ccccccCCCChHHHHHHHHHHhh---hcCccEEEEecCCccccCC-----c-hhhHHHHHHHHHhcCCcEEEeCC--CCH
Q 017733 236 AECAEAVDSNPEALGLYMAKALN---KFKLLYLHVIEPRMIQLTD-----K-SETQRSLLSMRRAFEGTFIAAGG--YSR 304 (367)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~L~---~~Gvd~i~v~~~~~~~~~~-----~-~~~~~~~~~ir~~~~~pvi~~Gg--it~ 304 (367)
.+.+++.+.++.++ +.|+|+|++--+....+.. . ....+.++.+++.+++||++=-. ++.
T Consensus 136 ---------~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~ 206 (354)
T 4ef8_A 136 ---------LSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDF 206 (354)
T ss_dssp ---------SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSH
T ss_pred ---------CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCH
Confidence 23677888899888 5689999874332111111 1 11235677899999999775433 455
Q ss_pred HHHH---HHHHcCC-CcEEcc
Q 017733 305 DEGN---KAVAANY-TDLVAF 321 (367)
Q Consensus 305 ~~a~---~~L~~G~-~D~V~~ 321 (367)
++.. +.+.+.. +|+|.+
T Consensus 207 ~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 207 AHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHHhCCCccEEEE
Confidence 4443 3333544 898864
No 470
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.36 E-value=1.1 Score=39.76 Aligned_cols=79 Identities=18% Similarity=0.045 Sum_probs=57.5
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHHHHHHHHcCCCcEEcccHHHH
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDEGNKAVAANYTDLVAFGRLFL 326 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~a~~~L~~G~~D~V~~gR~~l 326 (367)
+++..+++.+.+.|++.+.+...+ +...+.++.+++.++.-+++.|-+ +.++++.+++.| +|+|-++.
T Consensus 38 ~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~igagtvl~~d~~~~A~~aG-Ad~v~~p~--- 106 (225)
T 1mxs_A 38 EDILPLADALAAGGIRTLEVTLRS-------QHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAG-AQFVVTPG--- 106 (225)
T ss_dssp GGHHHHHHHHHHTTCCEEEEESSS-------THHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHT-CSSEECSS---
T ss_pred HHHHHHHHHHHHCCCCEEEEecCC-------ccHHHHHHHHHHhCcccEEeeCeEeeHHHHHHHHHCC-CCEEEeCC---
Confidence 446788999999999999986331 223456777888886556666656 899999999999 99998873
Q ss_pred hCCchHHHHHh
Q 017733 327 ANPDLPKRFEL 337 (367)
Q Consensus 327 adP~l~~k~~~ 337 (367)
.|++.....+.
T Consensus 107 ~d~~v~~~~~~ 117 (225)
T 1mxs_A 107 ITEDILEAGVD 117 (225)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 46666555443
No 471
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=88.34 E-value=2.8 Score=40.26 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 282 QRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
+..++.+++.+++||+.-|-.++++|+.+.+.| +|+|.+
T Consensus 241 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~aG-ad~I~v 279 (392)
T 2nzl_A 241 WEDIKWLRRLTSLPIVAKGILRGDDAREAVKHG-LNGILV 279 (392)
T ss_dssp HHHHHHHC--CCSCEEEEEECCHHHHHHHHHTT-CCEEEE
T ss_pred HHHHHHHHHhhCCCEEEEecCCHHHHHHHHHcC-CCEEEe
Confidence 345778888899998887666999999999999 999987
No 472
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=88.31 E-value=4.3 Score=38.39 Aligned_cols=39 Identities=13% Similarity=0.138 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 282 QRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 282 ~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
++.++.+++.+++||+.-+-.++++|+.+.+.| +|+|.+
T Consensus 206 w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~~G-aD~I~v 244 (352)
T 3sgz_A 206 WNDLSLLQSITRLPIILKGILTKEDAELAMKHN-VQGIVV 244 (352)
T ss_dssp HHHHHHHHHHCCSCEEEEEECSHHHHHHHHHTT-CSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEecCcHHHHHHHHHcC-CCEEEE
Confidence 456888999999999988777999999999999 999876
No 473
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=88.08 E-value=15 Score=33.53 Aligned_cols=137 Identities=14% Similarity=0.013 Sum_probs=80.3
Q ss_pred cCCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 017733 80 GIWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVN 159 (367)
Q Consensus 80 ~~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~ 159 (367)
+...++.++.++++++.++++|..+.+-+...+| ..+ +
T Consensus 113 ~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~------------------------------~~~------------~ 150 (293)
T 3ewb_X 113 KMSRAEVLASIKHHISYARQKFDVVQFSPEDATR------------------------------SDR------------A 150 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGG------------------------------SCH------------H
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCC------------------------------CCH------------H
Confidence 3455677888999999999998765533321111 111 4
Q ss_pred HHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCc-ceEEEeCCCccc
Q 017733 160 DFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAE-RVGMRLSPYAEC 238 (367)
Q Consensus 160 ~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~-~i~vrls~~~~~ 238 (367)
.+.+.++.+.++|.|.|-|-- ..|.. .+.-+.++++++|+.++.. .+-+-+...+++
T Consensus 151 ~~~~~~~~~~~~G~~~i~l~D-------------------T~G~~---~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 208 (293)
T 3ewb_X 151 FLIEAVQTAIDAGATVINIPD-------------------TVGYT---NPTEFGQLFQDLRREIKQFDDIIFASHCHDDL 208 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC-------------------SSSCC---CHHHHHHHHHHHHHHCTTGGGSEEEEECBCTT
T ss_pred HHHHHHHHHHHcCCCEEEecC-------------------CCCCC---CHHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence 567888888999999887643 33432 1445688999999999743 233434443322
Q ss_pred cccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHH
Q 017733 239 AEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMR 289 (367)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir 289 (367)
+.... ..++ ..++|++.++.+-..++...+..+....+..++
T Consensus 209 -----Gla~A--N~la--A~~aGa~~vd~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 209 -----GMATA--NALA--AIENGARRVEGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp -----SCHHH--HHHH--HHHTTCCEEEEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred -----ChHHH--HHHH--HHHhCCCEEEeeccccccccccHhHHHHHHHHH
Confidence 11222 1222 235899999987665544333333333333343
No 474
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=88.03 E-value=6.4 Score=36.24 Aligned_cols=153 Identities=15% Similarity=0.089 Sum_probs=81.4
Q ss_pred HHHHHHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+. .+. .+ -..|.-.=++ .-.+..+++|.+.+. .||.+.+--
T Consensus 29 ~~sA~~~~~aG~~ai~vsg~~~a~----~l-----G~pD~~~vt~----~em~~~~~~I~~~~~-~PviaD~d~------ 88 (295)
T 1s2w_A 29 GLSARIVQEAGFKGIWGSGLSVSA----QL-----GVRDSNEASW----TQVVEVLEFMSDASD-VPILLDADT------ 88 (295)
T ss_dssp HHHHHHHHHHTCSCEEECCHHHHH----TC--------------C----HHHHHHHHHHHHTCS-SCEEEECCS------
T ss_pred HHHHHHHHHcCCCEEEeChHHHHH----hC-----CCCCCCCCCH----HHHHHHHHHHHhcCC-CCEEecCCC------
Confidence 45678888899999997642 221 01 1122100122 233455556666553 367775532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cC----CchhhHHHHH---HHHHhc-CCcEEEeCCC------
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LT----DKSETQRSLL---SMRRAF-EGTFIAAGGY------ 302 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~----~~~~~~~~~~---~ir~~~-~~pvi~~Ggi------ 302 (367)
+.++ .+.+.+.++.++++|+..|++-.....+ .. .-.+....+. .++++- .......++-
T Consensus 89 -Gyg~-~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~ 166 (295)
T 1s2w_A 89 -GYGN-FNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAG 166 (295)
T ss_dssp -SCSS-HHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTT
T ss_pred -CCCC-HHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcc
Confidence 1223 4667888999999999999996543210 00 0112223333 344433 2333333331
Q ss_pred -----CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 303 -----SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 303 -----t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
..+.+..+.+.| +|+|.+=- -+.+++..+++.+.
T Consensus 167 ~g~~~ai~Ra~ay~eAG-Ad~i~~e~-~~~~~~~~~~i~~~ 205 (295)
T 1s2w_A 167 WGLDEALKRAEAYRNAG-ADAILMHS-KKADPSDIEAFMKA 205 (295)
T ss_dssp CCHHHHHHHHHHHHHTT-CSEEEECC-CSSSSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcC-CCEEEEcC-CCCCHHHHHHHHHH
Confidence 134577888898 99998821 13456777776654
No 475
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=87.93 E-value=16 Score=34.00 Aligned_cols=215 Identities=15% Similarity=0.114 Sum_probs=111.4
Q ss_pred HHHHHhhcC-CCeeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCC
Q 017733 48 ILYYSQRTT-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAP 126 (367)
Q Consensus 48 ~~~y~~~a~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~ 126 (367)
..-...... |.||.=||.+..+... .+ ..+++.+.++++++. -.|..+++-+...|..-...+. .
T Consensus 32 ~~~a~~~GadgVGL~RtE~l~ld~e~--~p-----~~~~q~~~~~~~~~~--~~~~~v~VR~~d~g~dk~~~~~-----~ 97 (324)
T 2xz9_A 32 VASALANGAEGVGLFRTEFLYMDRNS--LP-----SEEEQFEAYKEVVEK--MGGRPVTIRTLDIGGDKELPYL-----D 97 (324)
T ss_dssp HHHHHHTTCSSEEEECCGGGTSSSSS--CC-----CHHHHHHHHHHHHHH--TTTSCEEEECCCCBGGGCCTTT-----C
T ss_pred HHHHHhCCCCeEeehhhhhhhccCCC--CC-----CHHHHHHHHHHHHHH--hCCCceEEEeCCCCcchhhhhh-----c
Confidence 344444444 7899999999988542 11 345677777766654 3567789988876531100000 0
Q ss_pred cccC-CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCch
Q 017733 127 ISST-SKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSL 205 (367)
Q Consensus 127 ~~ps-~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~ 205 (367)
.|. ..|..+ ..| . .+...+ ..+.+.=.++..++...|.++|-+ |..+...
T Consensus 98 -~~~E~nP~LG-~Rg-----i-R~~l~~-p~~~~~ql~Ai~ra~~~G~~~Imv-------------PmV~s~~------- 148 (324)
T 2xz9_A 98 -MPKEMNPFLG-YRA-----I-RLCLDR-PDIFKTQLRAILRASAYGNVQIMY-------------PMISSVE------- 148 (324)
T ss_dssp -CCCCSCGGGS-SBT-----H-HHHHHC-HHHHHHHHHHHHHHGGGSCEEEEE-------------CSCCCHH-------
T ss_pred -cccccCcccc-cce-----e-eeeccc-hhhHHHHHHHHHHHHhCCCCEEEE-------------cCCCCHH-------
Confidence 000 000000 000 0 011111 123333345666666679888776 4444333
Q ss_pred hhHhHHHHHHHHHHHHHh---CC----c-ceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc--
Q 017733 206 ENRCRFALEVVEAVVREI---GA----E-RVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL-- 275 (367)
Q Consensus 206 enr~r~~~eii~aiR~~v---g~----~-~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~-- 275 (367)
..+.+.+++++++... |. . .|++=+ + +.. +...++.+.+. +|++.+...+..+.
T Consensus 149 --E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mI-----------E-tp~-av~~~d~Ia~~-vD~~siGtnDLtq~~l 212 (324)
T 2xz9_A 149 --EVRKANSILEEVKAELDREGVKYDKEIKVGIMV-----------E-IPS-AAVTADILAKE-VDFFSIGTNDLTQYTL 212 (324)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEE-----------C-SHH-HHHTHHHHTTT-CSEEEECHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEE-----------C-cHH-HHHHHHHHHHh-CcEEEECHHHHHHHHh
Confidence 2556777787777632 32 1 233322 1 122 34455566555 99998742221110
Q ss_pred ------------C--CchhhHHHHHHHHH---hcCCcEEEeCCC--CHHHHHHHHHcCCCcEEccc
Q 017733 276 ------------T--DKSETQRSLLSMRR---AFEGTFIAAGGY--SRDEGNKAVAANYTDLVAFG 322 (367)
Q Consensus 276 ------------~--~~~~~~~~~~~ir~---~~~~pvi~~Ggi--t~~~a~~~L~~G~~D~V~~g 322 (367)
+ ..+.....++.+.+ ...+|+..+|.+ +++.+..++..| +|+++++
T Consensus 213 g~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~~dp~~~~~l~~lG-~~~~si~ 277 (324)
T 2xz9_A 213 AVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMAGDPLAAVILLGLG-LDEFSMS 277 (324)
T ss_dssp TCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGGCHHHHHHHHHHT-CCEEEEC
T ss_pred CCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccCCCHHHHHHHHHCC-CCEEEEC
Confidence 0 01222233333222 236788777887 799999999999 8887654
No 476
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.83 E-value=16 Score=33.24 Aligned_cols=146 Identities=16% Similarity=0.071 Sum_probs=78.9
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+-.|+.+.++|||.|-+ +.. |-...+ -..|.-.-++ .-.+..+++|++.++.-+|.+.+. |.
T Consensus 27 a~sA~l~e~aG~d~ilv-GdS--l~~~~l-----G~~dt~~vTl----demi~h~~aV~r~~~~~~vvaD~p----fg-- 88 (275)
T 1o66_A 27 SSFAALMDDAGVEMLLV-GDS--LGMAVQ-----GRKSTLPVSL----RDMCYHTECVARGAKNAMIVSDLP----FG-- 88 (275)
T ss_dssp HHHHHHHHHTTCCEEEE-CTT--HHHHTT-----CCSSSTTCCH----HHHHHHHHHHHHHCSSSEEEEECC----TT--
T ss_pred HHHHHHHHHcCCCEEEE-CHH--HHHHHc-----CCCCCCCCCH----HHHHHHHHHHHhhCCCCeEEEECC----CC--
Confidence 56788888999999953 211 111111 1111111122 245667777777775324556542 11
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEE-----------eCCC-----C--
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIA-----------AGGY-----S-- 303 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~-----------~Ggi-----t-- 303 (367)
+...+.+++.+-+.+|.++|++.+++-.+ ......++.+.++ .+||++ -|++ |
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEdg--------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~ 159 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEGG--------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGK 159 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEECS--------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------C
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECCc--------HHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHH
Confidence 11235677888888888899999998544 1233344444443 567762 1332 1
Q ss_pred ----HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 304 ----RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 304 ----~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
.++|..+.+.| +|+|.+== + ..++.+++.+.
T Consensus 160 a~~~i~rA~a~~eAG-A~~ivlE~--v-p~~~a~~it~~ 194 (275)
T 1o66_A 160 AQALLNDAKAHDDAG-AAVVLMEC--V-LAELAKKVTET 194 (275)
T ss_dssp HHHHHHHHHHHHHTT-CSEEEEES--C-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CcEEEEec--C-CHHHHHHHHHh
Confidence 23456666788 88876621 1 12566666654
No 477
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=87.78 E-value=3.7 Score=37.79 Aligned_cols=97 Identities=8% Similarity=-0.063 Sum_probs=57.5
Q ss_pred HHHHHHHHhC--CcceEEEeCCCccccccCCCChHHHHHHHHHHhhhcCcc---EEEEecCCccccC----C-ch-hhHH
Q 017733 215 VVEAVVREIG--AERVGMRLSPYAECAEAVDSNPEALGLYMAKALNKFKLL---YLHVIEPRMIQLT----D-KS-ETQR 283 (367)
Q Consensus 215 ii~aiR~~vg--~~~i~vrls~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd---~i~v~~~~~~~~~----~-~~-~~~~ 283 (367)
+++.+++... ..++.+-+.. ...+++.+.++.+.++|+| +|++.-....... . .+ ...+
T Consensus 81 ~~~~~~~~~~~~~~p~~~~i~g----------~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ 150 (314)
T 2e6f_A 81 YLKYASDLHDYSKKPLFLSISG----------LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRT 150 (314)
T ss_dssp HHHHHHHTCCTTTCCEEEEECC----------SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHH
T ss_pred HHHHHHHHhhcCCCcEEEEeCC----------CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHH
Confidence 3444554322 2367765543 2467788999999999999 9988643211111 0 11 1234
Q ss_pred HHHHHHHhcCCcEEE--eCCCCHHH----HHHHHHcCCCcEEcc
Q 017733 284 SLLSMRRAFEGTFIA--AGGYSRDE----GNKAVAANYTDLVAF 321 (367)
Q Consensus 284 ~~~~ir~~~~~pvi~--~Ggit~~~----a~~~L~~G~~D~V~~ 321 (367)
.++.+|+.++.||++ ..+++.++ ++.+.+.|.+|+|.+
T Consensus 151 ii~~vr~~~~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v 194 (314)
T 2e6f_A 151 YLQQVSLAYGLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTC 194 (314)
T ss_dssp HHHHHHHHHCSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 677888888888764 34456666 444444543888753
No 478
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=87.58 E-value=8.8 Score=35.51 Aligned_cols=155 Identities=11% Similarity=0.074 Sum_probs=84.6
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhC-CcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIG-AERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg-~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+.+.. +-...+ -..|.-.=+++ -.++.+++|++.+. .-||.+.+--
T Consensus 35 ~~sA~l~e~aGf~ai~vsG~~--~a~s~~-----G~pD~~~vt~~----em~~~~~~i~r~~~~~~PviaD~d~------ 97 (307)
T 3lye_A 35 GLSARTAMELGFKSLYMTGAG--TTASRL-----GQPDLAIAQLH----DMRDNADMIANLDPFGPPLIADMDT------ 97 (307)
T ss_dssp HHHHHHHHHTTCSCEEECHHH--HHHHHH-----CCCSSSCSCHH----HHHHHHHHHHTSSTTSCCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEeccHH--HHHHhc-----CCCCCCCCCHH----HHHHHHHhhhccCCCCCcEEEECCC------
Confidence 567888889999999975321 111111 12222111222 23445555555543 2377776532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCcccc----CC--chhhHHHHHHHHH---h---cCCcEEEeCCC-C----
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL----TD--KSETQRSLLSMRR---A---FEGTFIAAGGY-S---- 303 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~----~~--~~~~~~~~~~ir~---~---~~~pvi~~Ggi-t---- 303 (367)
+.++ .+...+.++.++++|+..+++-....... .. -.+...+..+|+. + .+.+++.+.+. .
T Consensus 98 -Gyg~-~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~ 175 (307)
T 3lye_A 98 -GYGG-PIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSL 175 (307)
T ss_dssp -CSSS-HHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHH
T ss_pred -CCCC-HHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhcc
Confidence 1123 45677889999999999999854432110 00 1112233333332 2 24455555543 1
Q ss_pred -----HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 304 -----RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 304 -----~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
.+.+..+.+.| +|+|.+= -+.+++.++++.+.
T Consensus 176 gldeAi~Ra~ay~eAG-AD~ifi~--~~~~~~~~~~i~~~ 212 (307)
T 3lye_A 176 GYEECIERLRAARDEG-ADVGLLE--GFRSKEQAAAAVAA 212 (307)
T ss_dssp CHHHHHHHHHHHHHTT-CSEEEEC--CCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCC-CCEEEec--CCCCHHHHHHHHHH
Confidence 23466778898 9999883 34677777777664
No 479
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=87.53 E-value=4.3 Score=38.68 Aligned_cols=130 Identities=8% Similarity=-0.084 Sum_probs=77.2
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChH
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPE 247 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~ 247 (367)
++.+|.+.|-|..+-- +. ++..+.+-+.+.-.+.+.++++..|+... -|.+++.+ ....+.
T Consensus 96 l~~ag~~~v~if~~~S--------d~--h~~~~l~~s~~e~l~~~~~~v~~a~~~g~----~v~~~~ed-----~~r~~~ 156 (370)
T 3rmj_A 96 VAPAPKKRIHTFIATS--------PI--HMEYKLKMKPKQVIEAAVKAVKIAREYTD----DVEFSCED-----ALRSEI 156 (370)
T ss_dssp HTTSSSEEEEEEEECS--------HH--HHHHTTCCCHHHHHHHHHHHHHHHTTTCS----CEEEEEET-----GGGSCH
T ss_pred HhhCCCCEEEEEecCc--------HH--HHHHHhCCCHHHHHHHHHHHHHHHHHcCC----EEEEecCC-----CCccCH
Confidence 3568999998877652 22 22234455555545555555655555422 23445421 112356
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC---cEEEeCCC-----CHHHHHHHHHcCCCcEE
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG---TFIAAGGY-----SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~---pvi~~Ggi-----t~~~a~~~L~~G~~D~V 319 (367)
+...++++.+.+.|++.|.+..-. + ...+......++.+++.++. ..+..... -...+..+++.| ++.|
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~-G-~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aG-a~~v 233 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTV-G-YSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGG-ARQV 233 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSS-S-CCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCcc-C-CcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhC-CCEE
Confidence 778899999999999998875321 1 11122234567888888863 23444433 256778899998 7765
No 480
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.44 E-value=1.3 Score=42.73 Aligned_cols=65 Identities=9% Similarity=0.084 Sum_probs=47.1
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
+.++.+.+.|+|++.+... .. ......+.++.+|+.+ +.||++.+..++++++.+++.| +|+|.+
T Consensus 156 ~~a~~~~~~G~d~i~i~~~-~g---~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~G-ad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDSA-HG---HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVG-ADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECCS-CC---SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTT-CSEEEE
T ss_pred HHHHHHHHCCCCEEEEeCC-CC---ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcC-CCEEEE
Confidence 4556677889999987322 11 1122456678889998 6888875555899999999998 999987
No 481
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.40 E-value=2.1 Score=40.75 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=45.7
Q ss_pred HHHHhhhcCccEEEEecCCc---cccCCch---hhHHHHHHHHHhcCCcEEEeCC---CCHHHHHHHHHcCCCcEEcc
Q 017733 253 MAKALNKFKLLYLHVIEPRM---IQLTDKS---ETQRSLLSMRRAFEGTFIAAGG---YSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 253 l~~~L~~~Gvd~i~v~~~~~---~~~~~~~---~~~~~~~~ir~~~~~pvi~~Gg---it~~~a~~~L~~G~~D~V~~ 321 (367)
..+.++..|+|.+.++-... ..+.... ...+.++.+++.+++||++-+- .++++|+.+.+.| +|+|.+
T Consensus 160 ~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~aG-ad~I~V 236 (365)
T 3sr7_A 160 GLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEVGFGMDVKTIQTAIDLG-VKTVDI 236 (365)
T ss_dssp HHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEECSSCCCHHHHHHHHHHT-CCEEEC
T ss_pred HHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHcC-CCEEEE
Confidence 34444556778776654321 1112222 1235688899999999887753 5899999999999 999976
No 482
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=87.36 E-value=1.4 Score=43.86 Aligned_cols=66 Identities=8% Similarity=0.050 Sum_probs=48.2
Q ss_pred HHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCCcEEcc
Q 017733 251 LYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYTDLVAF 321 (367)
Q Consensus 251 ~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~D~V~~ 321 (367)
.+.++.+.++|+|.|+++... . ......+.++.+++.+ +.||++.+-.+.++|+.+++.| +|+|-+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~-G---~~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aG-ad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQ-G---NSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAG-VDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSC-C---CSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHT-CSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccC-C---cchhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcC-CCEEEE
Confidence 456667788999999985331 1 1112346788999998 6788764445899999999999 999955
No 483
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=87.32 E-value=10 Score=34.93 Aligned_cols=66 Identities=15% Similarity=0.084 Sum_probs=39.2
Q ss_pred HHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHcCCCc
Q 017733 252 YMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAANYTD 317 (367)
Q Consensus 252 ~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~G~~D 317 (367)
.+-+.|..+|+|||++..-..............+..+++.=++.-|++..+++++.+++++...++
T Consensus 131 ~~e~SL~rL~~dyiDL~~~H~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~ 196 (314)
T 3b3d_A 131 AFETSLSKLGLDYLDLYLIHWPVEGKYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIK 196 (314)
T ss_dssp HHHHHHHHHTCSCEEEEEESSCCTTTHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSC
T ss_pred HHHHHHHHhCCCcccccccccccccchhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCC
Confidence 445567888888887632111111111223345666776655667777788888888877765444
No 484
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=87.24 E-value=13 Score=33.85 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCC-CchhhHhHHHHHHHHHHHHHhCCcceEE
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYG-GSLENRCRFALEVVEAVVREIGAERVGM 230 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yG-gs~enr~r~~~eii~aiR~~vg~~~i~v 230 (367)
++.++.|..|.+||...|-||. |.+. | .|+ ++....|++++||+++++-+|.+
T Consensus 34 eEia~~A~~a~~AGAaivHlHv----------------Rd~~-G~ps~--d~~~~~e~~~~IR~~~pd~ii~~ 87 (282)
T 2y7e_A 34 EEQAKEAKACFEAGARVIHLHI----------------REDD-GRPSQ--RLDRFQEAISAIREVVPEIIIQI 87 (282)
T ss_dssp HHHHHHHHHHHHHTEEEEEECE----------------ECTT-SCEEC--CHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEee----------------cCCC-CCcCC--CHHHHHHHHHHHHHHCCCeEEEe
Confidence 4558899999999999999985 4432 3 343 57788999999999965324444
No 485
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=87.20 E-value=4.8 Score=34.96 Aligned_cols=36 Identities=14% Similarity=0.033 Sum_probs=28.4
Q ss_pred cCCcEEEeCCCCHHHHHHHHHcCCCcEEcccHHHHh
Q 017733 292 FEGTFIAAGGYSRDEGNKAVAANYTDLVAFGRLFLA 327 (367)
Q Consensus 292 ~~~pvi~~Ggit~~~a~~~L~~G~~D~V~~gR~~la 327 (367)
.+.|++..||++|+...++|+.-..+.|-+..++=.
T Consensus 150 ~~~p~~LAGGL~peNV~~ai~~~~p~gVDvsSGvE~ 185 (205)
T 1nsj_A 150 RFRYLVLSGGLNPENVRSAIDVVRPFAVDVSSGVEA 185 (205)
T ss_dssp GSSCEEEESSCCTTTHHHHHHHHCCSEEEESGGGEE
T ss_pred CCCcEEEECCCCHHHHHHHHHhcCCCEEEECCceec
Confidence 367999999999999988877533778888777654
No 486
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=87.15 E-value=12 Score=37.43 Aligned_cols=140 Identities=14% Similarity=0.060 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcc
Q 017733 158 VNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAE 237 (367)
Q Consensus 158 i~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~ 237 (367)
++.|.++ +.++|.|.|.|..+. |. .+-+.+.++.+|+.- . .+..-++....
T Consensus 119 ~~~~ve~---a~~aGvd~vrIf~s~--------sd----------------~~ni~~~i~~ak~~G-~-~v~~~i~~~~~ 169 (539)
T 1rqb_A 119 VDRFVDK---SAENGMDVFRVFDAM--------ND----------------PRNMAHAMAAVKKAG-K-HAQGTICYTIS 169 (539)
T ss_dssp HHHHHHH---HHHTTCCEEEECCTT--------CC----------------THHHHHHHHHHHHTT-C-EEEEEEECCCS
T ss_pred cHHHHHH---HHhCCCCEEEEEEeh--------hH----------------HHHHHHHHHHHHHCC-C-eEEEEEEeeeC
Confidence 4455544 457899999986543 11 133567778777653 2 23223343211
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeC----CCCHHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAG----GYSRDEGNKAV 311 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G----git~~~a~~~L 311 (367)
...+.+.+.++++.+.+.|++.|.+..-.- ..........++.+++.+ ++||-.=. |.....+..++
T Consensus 170 -----~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G--~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAv 242 (539)
T 1rqb_A 170 -----PVHTVEGYVKLAGQLLDMGADSIALKDMAA--LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAI 242 (539)
T ss_dssp -----TTCCHHHHHHHHHHHHHTTCSEEEEEETTC--CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCCEEEeCCCCC--CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHH
Confidence 122578889999999999999988753211 111222346678899888 45643321 22467888999
Q ss_pred HcCCCcEE-----cccHHHHhCCchHHHH
Q 017733 312 AANYTDLV-----AFGRLFLANPDLPKRF 335 (367)
Q Consensus 312 ~~G~~D~V-----~~gR~~ladP~l~~k~ 335 (367)
+.| +|.| ++|.. ..||++-.-+
T Consensus 243 eAG-a~~VD~ti~g~Ger-tGN~~lE~lv 269 (539)
T 1rqb_A 243 EAG-VDVVDTAISSMSLG-PGHNPTESVA 269 (539)
T ss_dssp HTT-CSEEEEBCGGGCST-TSBCBHHHHH
T ss_pred HhC-CCEEEEeccccCCC-ccChhHHHHH
Confidence 999 7765 44544 5677655443
No 487
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.90 E-value=4.6 Score=36.61 Aligned_cols=91 Identities=19% Similarity=0.045 Sum_probs=57.1
Q ss_pred hHHHHHHHHHHhhhcCccEEEEecCCccccCCch-----------------hhHHHHHHHHHh-cCCcEEEeCCCCH---
Q 017733 246 PEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKS-----------------ETQRSLLSMRRA-FEGTFIAAGGYSR--- 304 (367)
Q Consensus 246 ~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~-----------------~~~~~~~~ir~~-~~~pvi~~Ggit~--- 304 (367)
+.+.+.++++.|++.|+|+|++.-+.-.+....+ ...+.++.+|+. .++|++.-+-++|
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 3677889999999999999999755322211111 012456778887 7889777654343
Q ss_pred ---HH-HHHHHHcCCCcEEcccHHHHhCC-chHHHHHh
Q 017733 305 ---DE-GNKAVAANYTDLVAFGRLFLANP-DLPKRFEL 337 (367)
Q Consensus 305 ---~~-a~~~L~~G~~D~V~~gR~~ladP-~l~~k~~~ 337 (367)
+. ++++.+.| +|.|.+.---+.+. ++.+.+++
T Consensus 110 ~g~e~f~~~~~~aG-vdgvii~Dlp~ee~~~~~~~~~~ 146 (267)
T 3vnd_A 110 NGIDEFYTKAQAAG-VDSVLIADVPVEESAPFSKAAKA 146 (267)
T ss_dssp HCHHHHHHHHHHHT-CCEEEETTSCGGGCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcC-CCEEEeCCCCHhhHHHHHHHHHH
Confidence 43 57777888 99987743333333 23444443
No 488
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=86.84 E-value=15 Score=33.59 Aligned_cols=155 Identities=11% Similarity=-0.032 Sum_probs=85.7
Q ss_pred HHHHHHHHHhCCCEEEEecc-cchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGA-NGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~-~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
+-.|+.+.++|||+|-+..+ .+. ..+ -..|.-.=+++ -.+..+++|.+.+. .||.+.+--
T Consensus 31 ~~sA~i~e~aGf~ai~vs~s~~a~---~~l-----G~pD~~~vt~~----em~~~~~~I~r~~~-~PviaD~d~------ 91 (287)
T 3b8i_A 31 PMSARIAADLGFECGILGGSVASL---QVL-----AAPDFALITLS----EFVEQATRIGRVAR-LPVIADADH------ 91 (287)
T ss_dssp HHHHHHHHHTTCSCEEECHHHHHH---HHH-----SCCSSSCSCHH----HHHHHHHHHHTTCS-SCEEEECTT------
T ss_pred HHHHHHHHHcCCCEEEeCcHHHHH---Hhc-----CCCCCCCCCHH----HHHHHHHHHHhcCC-CCEEEECCC------
Confidence 56788888999999997654 211 111 12221111222 23444444544443 367665532
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccc----cCC-chhhHHHHHH---HHHhc-CCcEEEeCC-------C--
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQ----LTD-KSETQRSLLS---MRRAF-EGTFIAAGG-------Y-- 302 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~----~~~-~~~~~~~~~~---ir~~~-~~pvi~~Gg-------i-- 302 (367)
+.+ ..+++.+.++.+.++|++.+++-...... ... -.+..+.+.+ ++++- ...+..+++ +
T Consensus 92 -Gyg-~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ 169 (287)
T 3b8i_A 92 -GYG-NALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDA 169 (287)
T ss_dssp -CSS-SHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHH
T ss_pred -CCC-CHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHH
Confidence 112 45678888999999999999996553211 001 1112233344 44432 223333332 2
Q ss_pred CHHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhCCC
Q 017733 303 SRDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELNAP 340 (367)
Q Consensus 303 t~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g~~ 340 (367)
..+.+..+.+.| +|+|.+= .+.+++..+++.+...
T Consensus 170 ai~Ra~ay~eAG-Ad~i~~e--~~~~~~~~~~i~~~~~ 204 (287)
T 3b8i_A 170 VIQRTLAYQEAG-ADGICLV--GVRDFAHLEAIAEHLH 204 (287)
T ss_dssp HHHHHHHHHHTT-CSEEEEE--CCCSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcC-CCEEEec--CCCCHHHHHHHHHhCC
Confidence 245677888888 9999884 3566788888887643
No 489
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=86.70 E-value=3.3 Score=37.86 Aligned_cols=97 Identities=10% Similarity=-0.090 Sum_probs=63.2
Q ss_pred ccccCCCChHHHHHHHHHHhhhcCccEEEEecCC-ccc--cCC-chh---hHHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Q 017733 238 CAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPR-MIQ--LTD-KSE---TQRSLLSMRRAFEGTFIAAGGYSRDEGNKA 310 (367)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~-~~~--~~~-~~~---~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~ 310 (367)
|.+.+.....+.+.+.++.+.+.|+|+|+|..-. ... +.+ ... ....++.+++. +.|| ..--+.++.++.+
T Consensus 19 Fsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~pi-SIDT~~~~va~aA 96 (280)
T 1eye_A 19 FSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITV-SIDTMRADVARAA 96 (280)
T ss_dssp TCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCE-EEECSCHHHHHHH
T ss_pred cCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEE-EEeCCCHHHHHHH
Confidence 4443334567888999999999999999996421 100 001 111 12234555554 5565 4455689999999
Q ss_pred HHcCCCcEEcccHHHHhCCchHHHHHh
Q 017733 311 VAANYTDLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 311 L~~G~~D~V~~gR~~ladP~l~~k~~~ 337 (367)
|+.| +|+|--..+.-.||++..-+++
T Consensus 97 l~aG-a~iINdvsg~~~d~~m~~~~a~ 122 (280)
T 1eye_A 97 LQNG-AQMVNDVSGGRADPAMGPLLAE 122 (280)
T ss_dssp HHTT-CCEEEETTTTSSCTTHHHHHHH
T ss_pred HHcC-CCEEEECCCCCCCHHHHHHHHH
Confidence 9998 8999888887779988776654
No 490
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=86.59 E-value=12 Score=38.82 Aligned_cols=137 Identities=17% Similarity=0.109 Sum_probs=79.5
Q ss_pred HHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccc-cCCC
Q 017733 166 RNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAE-AVDS 244 (367)
Q Consensus 166 ~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~-~~~~ 244 (367)
++|.++|.|.|.|..+. | ..+-+.+.++.+|+. |. .+.+-++...++.+ ....
T Consensus 204 ~~a~~~Gvd~irIf~s~------------n------------~l~~l~~~i~~ak~~-G~-~v~~~i~~~~d~~dp~r~~ 257 (718)
T 3bg3_A 204 EVAKENGMDVFRVFDSL------------N------------YLPNMLLGMEAAGSA-GG-VVEAAISYTGDVADPSRTK 257 (718)
T ss_dssp HHHHHHTCCEEEEECSS------------C------------CHHHHHHHHHHHHTT-TS-EEEEEEECCSCTTCTTCCT
T ss_pred HHHHhcCcCEEEEEecH------------H------------HHHHHHHHHHHHHHc-CC-eEEEEEEeeccccCCCCCC
Confidence 44556899999987643 1 133456677777764 32 22222222111111 1111
Q ss_pred ChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc-CCcEEEeCCC-----CHHHHHHHHHcCCCcE
Q 017733 245 NPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF-EGTFIAAGGY-----SRDEGNKAVAANYTDL 318 (367)
Q Consensus 245 ~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~-~~pvi~~Ggi-----t~~~a~~~L~~G~~D~ 318 (367)
.+.+.+.++++.+.++|++.|.+..-.- ..........++.+++.+ ++||-. ... ....+..++++| +|.
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G--~~~P~~v~~lV~~lk~~~p~~~I~~-H~Hnd~GlAvANslaAveAG-a~~ 333 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAG--LLKPTACTMLVSSLRDRFPDLPLHI-HTHDTSGAGVAAMLACAQAG-ADV 333 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTS--CCCHHHHHHHHHHHHHHSTTCCEEE-ECCCTTSCHHHHHHHHHHTT-CSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCC--CcCHHHHHHHHHHHHHhCCCCeEEE-EECCCccHHHHHHHHHHHhC-CCE
Confidence 2578889999999999999998753211 111122346678899998 456433 332 357788999999 786
Q ss_pred Ec-----ccHHHHhCCchHH
Q 017733 319 VA-----FGRLFLANPDLPK 333 (367)
Q Consensus 319 V~-----~gR~~ladP~l~~ 333 (367)
|- ||. -..||.+-.
T Consensus 334 VD~ti~GlGe-rtGN~~lE~ 352 (718)
T 3bg3_A 334 VDVAADSMSG-MTSQPSMGA 352 (718)
T ss_dssp EEEBCGGGCS-TTSCCBHHH
T ss_pred EEecCccccc-ccCchhHHH
Confidence 64 333 245665433
No 491
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=86.22 E-value=9.9 Score=35.08 Aligned_cols=155 Identities=14% Similarity=0.104 Sum_probs=83.2
Q ss_pred HHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCcccccc
Q 017733 162 RLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEA 241 (367)
Q Consensus 162 ~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~ 241 (367)
+-.|+.+.++|||+|-+.+.. +-...+ -..|.-.=+++ -.+..+++|++....-||.+.+--
T Consensus 28 ~~sA~l~e~aGf~ai~vsG~~--~a~~~~-----G~pD~~~vt~~----em~~~~~~I~~~~~~~PviaD~d~------- 89 (302)
T 3fa4_A 28 GLSARVALSAGFDALYMTGAG--TAASVH-----GQADLGICTLN----DMRANAEMISNISPSTPVIADADT------- 89 (302)
T ss_dssp HHHHHHHHTTTCSCEEECHHH--HHHHHH-----SCCSSSCCCHH----HHHHHHHHHHTTSTTSCEEEECTT-------
T ss_pred HHHHHHHHHcCCCEEEeCcHH--HHHHHc-----CCCCCCcCCHH----HHHHHHHHHHhhccCCCEEEECCC-------
Confidence 567888889999999975321 111111 12221111222 223344445444333377776632
Q ss_pred CCCChHHHHHHHHHHhhhcCccEEEEecCCcccc----CCc--hhhHHHHHHHHHh------cCCcEEEeCCC------C
Q 017733 242 VDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQL----TDK--SETQRSLLSMRRA------FEGTFIAAGGY------S 303 (367)
Q Consensus 242 ~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~----~~~--~~~~~~~~~ir~~------~~~pvi~~Ggi------t 303 (367)
+.++ .+...+.++.++++|+..+++-....... ..+ .+..++..+|+.. .+.+++.+.+. .
T Consensus 90 Gyg~-~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 168 (302)
T 3fa4_A 90 GYGG-PIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHG 168 (302)
T ss_dssp TTSS-HHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHC
T ss_pred CCCC-HHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCC
Confidence 1233 45677889999999999999854322110 011 1122333333332 23444444442 1
Q ss_pred ----HHHHHHHHHcCCCcEEcccHHHHhCCchHHHHHhC
Q 017733 304 ----RDEGNKAVAANYTDLVAFGRLFLANPDLPKRFELN 338 (367)
Q Consensus 304 ----~~~a~~~L~~G~~D~V~~gR~~ladP~l~~k~~~g 338 (367)
.+-++.+++.| +|.|.+ +-+.+++-++++.+.
T Consensus 169 ldeAi~Ra~ay~eAG-AD~ifi--~g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 169 YEESVARLRAARDAG-ADVGFL--EGITSREMARQVIQD 204 (302)
T ss_dssp HHHHHHHHHHHHTTT-CSEEEE--TTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCEEee--cCCCCHHHHHHHHHH
Confidence 23466778888 999987 335788877777664
No 492
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=86.14 E-value=7.2 Score=35.77 Aligned_cols=130 Identities=12% Similarity=0.007 Sum_probs=77.0
Q ss_pred HHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCCCChH
Q 017733 168 AIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVDSNPE 247 (367)
Q Consensus 168 a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~~~~~ 247 (367)
++.+|.+.|-+..+-- +..| ..+.+-|.+.-.+.+.++++..|+. | +-|++++.+. ...+.
T Consensus 89 ~~~ag~~~v~i~~~~S--------d~~~--~~nl~~s~~e~l~~~~~~v~~a~~~-g---~~v~~~~~d~-----~~~~~ 149 (293)
T 3ewb_X 89 LKDAVSPQIHIFLATS--------DVHM--EYKLKMSRAEVLASIKHHISYARQK-F---DVVQFSPEDA-----TRSDR 149 (293)
T ss_dssp HTTCSSEEEEEEEECS--------HHHH--HHTTCCCHHHHHHHHHHHHHHHHTT-C---SCEEEEEETG-----GGSCH
T ss_pred HhhcCCCEEEEEecCc--------HHHH--HHHhCCCHHHHHHHHHHHHHHHHhC-C---CEEEEEeccC-----CCCCH
Confidence 3458999888776542 2211 1233445555555566666666654 2 2344554211 12356
Q ss_pred HHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCC---cEEEeCCC-----CHHHHHHHHHcCCCcEE
Q 017733 248 ALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEG---TFIAAGGY-----SRDEGNKAVAANYTDLV 319 (367)
Q Consensus 248 ~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~---pvi~~Ggi-----t~~~a~~~L~~G~~D~V 319 (367)
+...++++.+.+.|++.|.+..-. + ...+......++.+++.++. ..+..... ....+..+++.| ++.|
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~-G-~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aG-a~~v 226 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTV-G-YTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENG-ARRV 226 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSS-S-CCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTT-CCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCC-C-CCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhC-CCEE
Confidence 778899999999999998875321 1 11122234567788888862 13344333 367788999999 7765
No 493
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.04 E-value=11 Score=34.59 Aligned_cols=123 Identities=11% Similarity=0.011 Sum_probs=70.2
Q ss_pred CcCCCCccCCCCCCHHHHHHHHhh-cC-CC-eeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHHcCCeeEEc
Q 017733 31 APLTRIRSYNHIPQPHAILYYSQR-TT-NG-GFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQKGGIIFCQ 107 (367)
Q Consensus 31 apm~~~~~~~g~~t~~~~~~y~~~-a~-g~-Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~~g~~~~~Q 107 (367)
+||.+-+..||......++-+.++ .. |+ |+++.+.+ |- .+.+..+|..+-++..++.+. ...++++.
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT-----GE----~~~Ls~eEr~~v~~~~~~~~~-grvpViaG 86 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGST-----GE----AFVQSLSEREQVLEIVAEEAK-GKIKLIAH 86 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTT-----TT----GGGSCHHHHHHHHHHHHHHHT-TTSEEEEE
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeec-----cC----hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe
Confidence 344333334677766644444433 33 65 77776632 11 123556666666666666654 24677765
Q ss_pred cccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHH
Q 017733 108 IWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLID 187 (367)
Q Consensus 108 l~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~ 187 (367)
..+. + .++-++.++.|+++|+|+|-+-.
T Consensus 87 vg~~--------------------------------------~-------t~~ai~la~~A~~~Gadavlv~~------- 114 (303)
T 2wkj_A 87 VGCV--------------------------------------S-------TAESQQLAASAKRYGFDAVSAVT------- 114 (303)
T ss_dssp CCCS--------------------------------------S-------HHHHHHHHHHHHHHTCSEEEEEC-------
T ss_pred cCCC--------------------------------------C-------HHHHHHHHHHHHhCCCCEEEecC-------
Confidence 5321 0 03447778888899999999764
Q ss_pred hhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceE
Q 017733 188 QFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVG 229 (367)
Q Consensus 188 qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~ 229 (367)
|.+|+-++ +-+.+-.++|-+++++-||.
T Consensus 115 ----P~y~~~s~----------~~l~~~f~~va~a~~~lPii 142 (303)
T 2wkj_A 115 ----PFYYPFSF----------EEHCDHYRAIIDSADGLPMV 142 (303)
T ss_dssp ----CCSSCCCH----------HHHHHHHHHHHHHHTTCCEE
T ss_pred ----CCCCCCCH----------HHHHHHHHHHHHhCCCCCEE
Confidence 65666442 34566777777777523443
No 494
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=85.99 E-value=8.9 Score=36.17 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=69.8
Q ss_pred HHhCCC-----EEEEecccchHHHhhcCcccccCCCCCCCchhhHh---HHHHHHHHHHHHHhCCcceEEEeCCCccccc
Q 017733 169 IEAGFD-----GVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRC---RFALEVVEAVVREIGAERVGMRLSPYAECAE 240 (367)
Q Consensus 169 ~~aGfd-----gVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~---r~~~eii~aiR~~vg~~~i~vrls~~~~~~~ 240 (367)
++||.| +|+++.- -...+.++....+ .+-++-++. .|..|-++.+++.+...=|.+=-++++
T Consensus 31 ~~aGad~~~d~avKfQt~---~~d~l~~~~~~~~---~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~fD---- 100 (350)
T 3g8r_A 31 RESCQGFDFDFGFKLQYR---NLDTFIHSSFKGR---DDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFD---- 100 (350)
T ss_dssp HHHTTTCCSEEEEEEEEC---CHHHHBCGGGTTC---CSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEECS----
T ss_pred HHhCCcccCCeeEEcccc---chhhhcChhccCc---cHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEeccCC----
Confidence 456777 9998753 3445554432111 111333333 366777777777763221111113321
Q ss_pred cCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCC-CHHH---HHHHHHcCCC
Q 017733 241 AVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGY-SRDE---GNKAVAANYT 316 (367)
Q Consensus 241 ~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggi-t~~~---a~~~L~~G~~ 316 (367)
. .-++.|++.|++++-|..+... +..+++.+.+ ++.|||.+-|. |.++ |.+++.++..
T Consensus 101 ------~----~svd~l~~~~v~~~KI~S~~~~-------N~pLL~~va~-~gKPviLstGmstl~Ei~~Ave~i~~~g~ 162 (350)
T 3g8r_A 101 ------E----ESVDLIEAHGIEIIKIASCSFT-------DWPLLERIAR-SDKPVVASTAGARREDIDKVVSFMLHRGK 162 (350)
T ss_dssp ------H----HHHHHHHHTTCCEEEECSSSTT-------CHHHHHHHHT-SCSCEEEECTTCCHHHHHHHHHHHHTTTC
T ss_pred ------H----HHHHHHHHcCCCEEEECccccc-------CHHHHHHHHh-hCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 1 1234567789999988655432 4456666665 58899999888 7654 5555655446
Q ss_pred cEEc
Q 017733 317 DLVA 320 (367)
Q Consensus 317 D~V~ 320 (367)
+++.
T Consensus 163 ~viL 166 (350)
T 3g8r_A 163 DLTI 166 (350)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 8665
No 495
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=85.64 E-value=13 Score=34.12 Aligned_cols=139 Identities=15% Similarity=0.086 Sum_probs=79.7
Q ss_pred HHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017733 84 KEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
++.++.++++++.+|++|.++++. .+.|.. . .+++ +....
T Consensus 154 ~~~l~~i~~v~~~a~~~GlpvIie-~~~G~~----------------------------~-----~~d~------e~i~~ 193 (295)
T 3glc_A 154 HQSIKNIIQLVDAGMKVGMPTMAV-TGVGKD----------------------------M-----VRDQ------RYFSL 193 (295)
T ss_dssp HHHHHHHHHHHHHHHTTTCCEEEE-ECC-------------------------------------CCSH------HHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEE-CCCCCc----------------------------c-----CCCH------HHHHH
Confidence 356788889999999999888764 221100 0 0111 22357
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
+|+.|.++|.|.|.... + .+ + ++++++.++ -||. ++. +.
T Consensus 194 aariA~elGAD~VKt~~-------------t---~e----~-----------~~~vv~~~~-vPVv--~~G-------G~ 232 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYY-------------V---EK----G-----------FERIVAGCP-VPIV--IAG-------GK 232 (295)
T ss_dssp HHHHHHHTTCSEEEEEC-------------C---TT----T-----------HHHHHHTCS-SCEE--EEC-------CS
T ss_pred HHHHHHHhCCCEEEeCC-------------C---HH----H-----------HHHHHHhCC-CcEE--EEE-------CC
Confidence 89999999999999752 1 01 1 244554442 2433 232 11
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHc
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAFEGTFIAAGGYSRDEGNKAVAA 313 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~Ggit~~~a~~~L~~ 313 (367)
..+.+++.+.++...++|++.+.+ .+...+.. .+ ...++.+++.+ -.+.++++|.+++..
T Consensus 233 ~~~~~~~l~~v~~ai~aGA~Gv~v-GRnI~q~~-dp--~~~~~al~~iv------h~~~s~~eA~~~~~~ 292 (295)
T 3glc_A 233 KLPEREALEMCWQAIDQGASGVDM-GRNIFQSD-HP--VAMMKAVQAVV------HHNETADRAYELYLS 292 (295)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEE-SHHHHTSS-SH--HHHHHHHHHHH------HHCCCHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEe-HHHHhcCc-CH--HHHHHHHHHHH------hCCCCHHHHHHHHHh
Confidence 113567778887777889998766 33333221 11 23455555443 246678888877754
No 496
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=85.36 E-value=8.9 Score=33.76 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcce
Q 017733 149 LSIEEIPKIVNDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERV 228 (367)
Q Consensus 149 mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i 228 (367)
-|.+|++.+.++ ++.++++|+|||-+= +|.+ +..-| .+.++.+.++.++-+
T Consensus 70 Ys~~E~~~M~~D----i~~~~~~GadGvV~G---------~Lt~--dg~iD-------------~~~~~~Li~~a~~~~- 120 (224)
T 2bdq_A 70 YNDLELRIMEED----ILRAVELESDALVLG---------ILTS--NNHID-------------TEAIEQLLPATQGLP- 120 (224)
T ss_dssp CCHHHHHHHHHH----HHHHHHTTCSEEEEC---------CBCT--TSSBC-------------HHHHHHHHHHHTTCC-
T ss_pred CCHHHHHHHHHH----HHHHHHcCCCEEEEe---------eECC--CCCcC-------------HHHHHHHHHHhCCCe-
Confidence 367788777665 556778999999963 2322 22223 444455555554332
Q ss_pred EEEeC-CCccccccCCCChHHHHHHHHHHhhhcCccEEEEecCCccccCCchhhHHHHHHHHHhc--CCcEEEeCCCCHH
Q 017733 229 GMRLS-PYAECAEAVDSNPEALGLYMAKALNKFKLLYLHVIEPRMIQLTDKSETQRSLLSMRRAF--EGTFIAAGGYSRD 305 (367)
Q Consensus 229 ~vrls-~~~~~~~~~~~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~Ggit~~ 305 (367)
+-+. +++. +...++ .+..+.|.+.|++-|=.|.+.... +-......++.+.+.. ++.|+.+||++++
T Consensus 121 -vTFHRAFD~---~~~~d~----~~ale~L~~lGv~rILTSG~~~~~--~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~~ 190 (224)
T 2bdq_A 121 -LVFHMAFDV---IPKSDQ----KKSIDQLVALGFTRILLHGSSNGE--PIIENIKHIKALVEYANNRIEIMVGGGVTAE 190 (224)
T ss_dssp -EEECGGGGG---SCTTTH----HHHHHHHHHTTCCEEEECSCSSCC--CGGGGHHHHHHHHHHHTTSSEEEECSSCCTT
T ss_pred -EEEECchhc---cCCcCH----HHHHHHHHHcCCCEEECCCCCCCC--cHHHHHHHHHHHHHhhCCCeEEEeCCCCCHH
Confidence 2222 2211 101222 234667778899988655443221 1122344555554443 3558888999999
Q ss_pred HHHHHHHcCCCcEEc
Q 017733 306 EGNKAVAANYTDLVA 320 (367)
Q Consensus 306 ~a~~~L~~G~~D~V~ 320 (367)
.+.++++...++-+=
T Consensus 191 Ni~~l~~~tGv~e~H 205 (224)
T 2bdq_A 191 NYQYICQETGVKQAH 205 (224)
T ss_dssp THHHHHHHHTCCEEE
T ss_pred HHHHHHHhhCCCEEc
Confidence 998888543366554
No 497
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=85.34 E-value=1.5 Score=40.35 Aligned_cols=54 Identities=19% Similarity=0.135 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEE
Q 017733 159 NDFRLAARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGM 230 (367)
Q Consensus 159 ~~f~~aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~v 230 (367)
++.++.|..|.+||...|-||. |.++ |. -..+.....|++++||+++++-+|.+
T Consensus 34 eEia~~A~~~~~AGAaivHlH~----------------Rd~~-G~-ps~d~~~~~e~~~~IR~~~pd~ii~~ 87 (284)
T 3chv_A 34 SEQVESTQEAFEAGAAIAHCHV----------------RNDD-GT-PSSDPDRFARLTEGLHTHCPGMIVQF 87 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEECE----------------ECTT-SC-EECCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEeee----------------cCCC-CC-cCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 4558899999999999999985 6666 42 22357788999999999975334444
No 498
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=85.31 E-value=1.4 Score=41.25 Aligned_cols=91 Identities=13% Similarity=0.035 Sum_probs=58.4
Q ss_pred CChHHHHHHHHHHhhhcCccEEEEecCCc--cccCCchhh----HHHHHHHHHhc-CCcEEEeCCCCHHHHHHHHHcCCC
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHVIEPRM--IQLTDKSET----QRSLLSMRRAF-EGTFIAAGGYSRDEGNKAVAANYT 316 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v~~~~~--~~~~~~~~~----~~~~~~ir~~~-~~pvi~~Ggit~~~a~~~L~~G~~ 316 (367)
....+.+.+.++.+.+.|+|+|+|-.-+. ....+.... ...++.+++.+ ++|| ..--+.++.++.+|+.| +
T Consensus 61 ~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpI-SIDT~~~~VaeaAl~aG-a 138 (318)
T 2vp8_A 61 TFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLI-SVDTWRAQVAKAACAAG-A 138 (318)
T ss_dssp ---CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEE-EEECSCHHHHHHHHHHT-C
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeE-EEeCCCHHHHHHHHHhC-C
Confidence 33457788889999999999999853211 111111111 12356667766 5554 44556899999999998 8
Q ss_pred cEEcccHHHHhCCchHHHHHh
Q 017733 317 DLVAFGRLFLANPDLPKRFEL 337 (367)
Q Consensus 317 D~V~~gR~~ladP~l~~k~~~ 337 (367)
|+|--..+. .||++..-+++
T Consensus 139 ~iINDVsg~-~d~~m~~vaa~ 158 (318)
T 2vp8_A 139 DLINDTWGG-VDPAMPEVAAE 158 (318)
T ss_dssp CEEEETTSS-SSTTHHHHHHH
T ss_pred CEEEECCCC-CchHHHHHHHH
Confidence 999877776 48988776654
No 499
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=85.30 E-value=8.7 Score=37.02 Aligned_cols=126 Identities=16% Similarity=0.103 Sum_probs=78.1
Q ss_pred CceeeCcCCCCcc-CCCCCCHHHHHHHHhhc----C-CCeeEEEccceeCCCCCCCCCCCcCCCHHhhhhhhHHHHHHHH
Q 017733 26 HRMVLAPLTRIRS-YNHIPQPHAILYYSQRT----T-NGGFLIAEATGVSNTAQGYPNTPGIWTKEQVEAWKPIVDAVHQ 99 (367)
Q Consensus 26 NRiv~apm~~~~~-~~g~~t~~~~~~y~~~a----~-g~Glii~e~~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~~vh~ 99 (367)
.++|...+..... .+....+++.++|++++ . |+-+++.|-+ .+ +...+-+++++++
T Consensus 115 ~~~VAGsIGP~g~~l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi---------------~~---~~Eakaa~~a~~~ 176 (406)
T 1lt8_A 115 DALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYF---------------EH---VEEAVWAVETLIA 176 (406)
T ss_dssp TCEEEEEECCCHHHHTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCC---------------SC---HHHHHHHHHHHGG
T ss_pred CCEEEEEcCCcccccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEccc---------------CC---HHHHHHHHHHHHH
Confidence 3677777765433 23455678899999876 2 5678888822 11 2334445677777
Q ss_pred cCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Q 017733 100 KGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRLAARNAIEAGFDGVEIH 179 (367)
Q Consensus 100 ~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~aA~~a~~aGfdgVei~ 179 (367)
.|.+++++++-. . +|. . . +. ...+++..+..+|.++|=||
T Consensus 177 ~~lPv~iS~T~~-~--------~G~---------l----~---G~---------------~~~~~~~~l~~~~~~avGvN 216 (406)
T 1lt8_A 177 SGKPVAATMAIG-P--------EGD---------L----H---GV---------------PPGEAAVRLVKAGASIIGVN 216 (406)
T ss_dssp GTSCEEEEECCB-T--------TBC---------T----T---CC---------------CHHHHHHHHHTTTCSEEEEE
T ss_pred hCCcEEEEEEEC-C--------CCC---------c----C---CC---------------cHHHHHHHhhcCCCCEEEec
Confidence 788888888531 0 110 0 0 11 12445555566899999999
Q ss_pred cccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHh---CCc-ceEEEeCC
Q 017733 180 GANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREI---GAE-RVGMRLSP 234 (367)
Q Consensus 180 ~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~v---g~~-~i~vrls~ 234 (367)
|+.| +..+...|+.+++.. |.+ +|++--|.
T Consensus 217 C~~g-------------------------P~~~~~~l~~l~~~~~~~g~~~pl~vyPNa 250 (406)
T 1lt8_A 217 CHFD-------------------------PTISLKTVKLMKEGLEAAQLKAHLMSQPLA 250 (406)
T ss_dssp SSSC-------------------------HHHHHHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred CCCC-------------------------HHHHHHHHHHHHHhhhhcCCCccEEEecCC
Confidence 9764 456788888888775 223 67776665
No 500
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=85.16 E-value=21 Score=32.03 Aligned_cols=110 Identities=18% Similarity=0.100 Sum_probs=69.6
Q ss_pred HHhhhhhhHHHHHHHHcCCeeEEccccCCccCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 017733 84 KEQVEAWKPIVDAVHQKGGIIFCQIWHAGRVSNYGLQPNGEAPISSTSKGVTPGVDGLDWSPPRPLSIEEIPKIVNDFRL 163 (367)
Q Consensus 84 ~~~~~~~~~l~~~vh~~g~~~~~Ql~h~Gr~~~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~ 163 (367)
++.++.++++.+.+|++|.++++- .+. +|.. + ....|. +...+
T Consensus 121 ~~~~~~~~~v~~~~~~~~~~vIi~-~~~----------~G~~-~------------------~~~~s~-------~~i~~ 163 (263)
T 1w8s_A 121 WKMFEELARIKRDAVKFDLPLVVE-SFP----------RGGK-V------------------VNETAP-------EIVAY 163 (263)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEE-ECC----------CSTT-C------------------CCTTCH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEE-eeC----------CCCc-c------------------ccCCCH-------HHHHH
Confidence 467788999999999999988764 221 0100 0 011232 23445
Q ss_pred HHHHHHHhCCCEEEEecccchHHHhhcCcccccCCCCCCCchhhHhHHHHHHHHHHHHHhCCcceEEEeCCCccccccCC
Q 017733 164 AARNAIEAGFDGVEIHGANGYLIDQFMKDQVNDRTDEYGGSLENRCRFALEVVEAVVREIGAERVGMRLSPYAECAEAVD 243 (367)
Q Consensus 164 aA~~a~~aGfdgVei~~~~gyLl~qFlsp~~N~R~D~yGgs~enr~r~~~eii~aiR~~vg~~~i~vrls~~~~~~~~~~ 243 (367)
+++.+.++|.|.|.... | ++ .+-++.+++.++ . +.|+.+.. ..
T Consensus 164 a~~~a~~~GAD~vkt~~-----------~----------~~--------~e~~~~~~~~~~-~-~pV~asGG------i~ 206 (263)
T 1w8s_A 164 AARIALELGADAMKIKY-----------T----------GD--------PKTFSWAVKVAG-K-VPVLMSGG------PK 206 (263)
T ss_dssp HHHHHHHHTCSEEEEEC-----------C----------SS--------HHHHHHHHHHTT-T-SCEEEECC------SC
T ss_pred HHHHHHHcCCCEEEEcC-----------C----------CC--------HHHHHHHHHhCC-C-CeEEEEeC------CC
Confidence 68889999999999752 1 11 466788888773 3 23555541 01
Q ss_pred CChHHHHHHHHHHhhhcCccEEEE
Q 017733 244 SNPEALGLYMAKALNKFKLLYLHV 267 (367)
Q Consensus 244 ~~~~~~~~~l~~~L~~~Gvd~i~v 267 (367)
.++.+++.+.+..+.++|++.+.+
T Consensus 207 ~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 207 TKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEE
Confidence 125677888888888899997665
Done!