Your job contains 1 sequence.
>017736
MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD
CCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSS
LVVSTPKVPQHTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKN
AQNRRQESYKAEPSSEQGPNKVGEITEAKADLWTPLNCLVEAANRTKSSKSNSQGPSLAK
TDLHNFPDSEVFMPETKVKVELPNSPGGEICSSKTKMKEHGLKTKYQNDKNGIGLHPGPM
KRRRRAAAKKREVGTEESCAAAQAMLDAAGAKYKRRNTPIWFSLVASEDQKGDGSLPQIS
TCYLRIK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017736
(367 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033103 - symbol:DRIP1 "DREB2A-interacting pro... 631 2.0e-73 2
TAIR|locus:2064392 - symbol:DRIP2 "DREB2A-interacting pro... 674 2.8e-66 1
TAIR|locus:2094608 - symbol:AT3G23060 species:3702 "Arabi... 261 1.9e-28 2
UNIPROTKB|I3LAF0 - symbol:PCGF3 "Uncharacterized protein"... 160 4.5e-15 2
UNIPROTKB|F1NLA3 - symbol:PCGF3 "Uncharacterized protein"... 165 9.6e-13 2
UNIPROTKB|Q5T8Z4 - symbol:BMI1 "Polycomb complex protein ... 142 1.2e-12 2
MGI|MGI:1916837 - symbol:Pcgf3 "polycomb group ring finge... 160 3.6e-12 2
UNIPROTKB|Q5T8Z6 - symbol:BMI1 "Polycomb complex protein ... 142 3.9e-12 2
UNIPROTKB|Q3KNV8 - symbol:PCGF3 "Polycomb group RING fing... 160 5.0e-12 2
UNIPROTKB|Q2KJ29 - symbol:PCGF3 "Polycomb group RING fing... 160 6.3e-12 2
UNIPROTKB|J9P325 - symbol:PCGF3 "Uncharacterized protein"... 160 2.1e-11 2
UNIPROTKB|C9J3G7 - symbol:PCGF3 "Polycomb group RING fing... 160 3.1e-11 1
UNIPROTKB|F1PGG1 - symbol:PCGF3 "Uncharacterized protein"... 160 3.6e-11 2
RGD|1307403 - symbol:Bmi1 "Bmi1 polycomb ring finger onco... 142 5.4e-11 2
UNIPROTKB|Q07G17 - symbol:pcgf3 "Polycomb group RING fing... 165 1.6e-10 1
UNIPROTKB|Q5T8Z1 - symbol:BMI1 "Polycomb complex protein ... 142 2.1e-10 2
UNIPROTKB|E1BAF7 - symbol:E1BAF7 "Uncharacterized protein... 160 7.8e-10 1
UNIPROTKB|Q28H21 - symbol:pcgf1 "Polycomb group RING fing... 161 9.6e-10 1
UNIPROTKB|Q4QR06 - symbol:pcgf1 "Polycomb group RING fing... 161 9.6e-10 1
FB|FBgn0002283 - symbol:l(3)73Ah "lethal (3) 73Ah" specie... 154 1.9e-09 1
UNIPROTKB|Q5T8Z5 - symbol:BMI1 "Polycomb complex protein ... 142 3.0e-09 1
MGI|MGI:88174 - symbol:Bmi1 "Bmi1 polycomb ring finger on... 142 3.9e-09 2
UNIPROTKB|C9JYD0 - symbol:PCGF3 "Polycomb group RING fing... 139 6.4e-09 1
ZFIN|ZDB-GENE-060512-34 - symbol:pcgf5b "polycomb group r... 151 8.3e-09 1
RGD|1549782 - symbol:Pcgf1 "polycomb group ring finger 1"... 152 8.5e-09 1
UNIPROTKB|Q6DLV9 - symbol:Pcgf1 "Polycomb group RING fing... 152 8.5e-09 1
UNIPROTKB|F1SNT4 - symbol:F1SNT4 "Uncharacterized protein... 153 9.4e-09 1
RGD|1583513 - symbol:Pcgf5 "polycomb group ring finger 5"... 139 9.6e-09 2
UNIPROTKB|F1MM90 - symbol:PCGF1 "Polycomb group RING fing... 152 1.2e-08 1
UNIPROTKB|E2R984 - symbol:PCGF1 "Uncharacterized protein"... 152 1.2e-08 1
UNIPROTKB|Q9BSM1 - symbol:PCGF1 "Polycomb group RING fing... 152 1.2e-08 1
MGI|MGI:1917087 - symbol:Pcgf1 "polycomb group ring finge... 152 1.2e-08 1
MGI|MGI:1101770 - symbol:Ring1 "ring finger protein 1" sp... 157 1.3e-08 1
UNIPROTKB|Q5SDR3 - symbol:BMI1 "Polycomb complex protein ... 142 1.7e-08 2
UNIPROTKB|Q32KX7 - symbol:BMI1 "Polycomb complex protein ... 142 1.7e-08 2
UNIPROTKB|E2RTM4 - symbol:BMI1 "Uncharacterized protein" ... 142 1.7e-08 2
UNIPROTKB|P35226 - symbol:BMI1 "Polycomb complex protein ... 142 1.7e-08 2
UNIPROTKB|F2Z5D1 - symbol:BMI1 "Uncharacterized protein" ... 142 1.7e-08 2
UNIPROTKB|Q5R8L2 - symbol:BMI1 "Polycomb complex protein ... 142 1.7e-08 2
UNIPROTKB|Q9TST0 - symbol:BMI1 "Polycomb complex protein ... 142 1.7e-08 2
UNIPROTKB|A0JN86 - symbol:PCGF5 "Polycomb group RING fing... 150 2.0e-08 1
UNIPROTKB|Q91648 - symbol:bmi1a "Polycomb complex protein... 142 2.1e-08 2
UNIPROTKB|J9P2L6 - symbol:PCGF5 "Uncharacterized protein"... 147 2.4e-08 1
ZFIN|ZDB-GENE-030616-605 - symbol:pcgf1 "polycomb group r... 151 2.8e-08 1
ZFIN|ZDB-GENE-080723-33 - symbol:pcgf5a "polycomb group r... 147 2.9e-08 1
UNIPROTKB|F1MUV0 - symbol:RING1 "Uncharacterized protein"... 153 3.2e-08 1
UNIPROTKB|I3LDV4 - symbol:I3LDV4 "Uncharacterized protein... 149 3.4e-08 1
UNIPROTKB|Q5TJF3 - symbol:RING1 "E3 ubiquitin-protein lig... 153 3.6e-08 1
UNIPROTKB|A5D9P0 - symbol:RING1 "Ring finger protein 1" s... 153 3.6e-08 1
MGI|MGI:1923505 - symbol:Pcgf5 "polycomb group ring finge... 139 3.9e-08 2
UNIPROTKB|F1PTU1 - symbol:PCGF5 "Uncharacterized protein"... 147 4.4e-08 1
ZFIN|ZDB-GENE-040116-4 - symbol:bmi1b "B lymphoma Mo-MLV ... 146 4.7e-08 2
RGD|3576 - symbol:Ring1 "ring finger protein 1" species:1... 152 4.7e-08 1
UNIPROTKB|F1PTT1 - symbol:PCGF5 "Uncharacterized protein"... 147 4.7e-08 1
UNIPROTKB|D4A0Y0 - symbol:D4A0Y0 "Uncharacterized protein... 131 4.8e-08 1
UNIPROTKB|F1LUN6 - symbol:F1LUN6 "Uncharacterized protein... 131 4.8e-08 1
UNIPROTKB|A1YER5 - symbol:RING1 "E3 ubiquitin-protein lig... 151 5.3e-08 1
UNIPROTKB|A1YFY1 - symbol:RING1 "E3 ubiquitin-protein lig... 151 5.3e-08 1
UNIPROTKB|A2T6X5 - symbol:RING1 "E3 ubiquitin-protein lig... 151 5.3e-08 1
UNIPROTKB|Q8WMN5 - symbol:RING1 "E3 ubiquitin-protein lig... 151 5.3e-08 1
UNIPROTKB|Q06587 - symbol:RING1 "E3 ubiquitin-protein lig... 151 6.2e-08 1
UNIPROTKB|J3KT13 - symbol:PCGF2 "Polycomb group ring fing... 138 8.5e-08 2
UNIPROTKB|Q2YDF9 - symbol:PCGF1 "Polycomb group RING fing... 145 8.7e-08 1
ZFIN|ZDB-GENE-030131-224 - symbol:bmi1a "B lymphoma Mo-ML... 142 1.0e-07 2
FB|FBgn0003330 - symbol:Sce "Sex combs extra" species:722... 149 1.2e-07 1
UNIPROTKB|Q640D5 - symbol:bmi1b "Polycomb complex protein... 137 1.3e-07 2
ZFIN|ZDB-GENE-060526-178 - symbol:pcgf6 "polycomb group r... 144 1.5e-07 1
UNIPROTKB|Q7ZWM8 - symbol:rnf2-b "E3 ubiquitin-protein li... 145 2.0e-07 1
UNIPROTKB|Q5R9J5 - symbol:RNF2 "E3 ubiquitin-protein liga... 144 2.5e-07 1
UNIPROTKB|Q66J69 - symbol:rnf2-a "E3 ubiquitin-protein li... 144 2.7e-07 1
MGI|MGI:99161 - symbol:Pcgf2 "polycomb group ring finger ... 138 4.0e-07 2
RGD|1305097 - symbol:Pcgf2 "polycomb group ring finger 2"... 138 4.0e-07 2
UNIPROTKB|E1BMR4 - symbol:PCGF2 "Uncharacterized protein"... 138 4.1e-07 2
UNIPROTKB|J9NUE7 - symbol:PCGF2 "Uncharacterized protein"... 138 4.1e-07 2
UNIPROTKB|P35227 - symbol:PCGF2 "Polycomb group RING fing... 138 4.1e-07 2
UNIPROTKB|Q86SE9 - symbol:PCGF5 "Polycomb group RING fing... 139 4.3e-07 1
UNIPROTKB|E2QY05 - symbol:PCGF2 "Uncharacterized protein"... 138 4.3e-07 2
UNIPROTKB|E2RFW1 - symbol:RNF2 "Uncharacterized protein" ... 141 5.6e-07 1
UNIPROTKB|E1BYN8 - symbol:PCGF5 "Uncharacterized protein"... 136 9.7e-07 1
UNIPROTKB|E1BQF7 - symbol:RNF2 "Uncharacterized protein" ... 137 1.6e-06 1
RGD|1305491 - symbol:Rnf2 "ring finger protein 2" species... 136 1.7e-06 1
UNIPROTKB|A6QLQ0 - symbol:RNF2 "RNF2 protein" species:991... 136 2.1e-06 1
UNIPROTKB|Q99496 - symbol:RNF2 "E3 ubiquitin-protein liga... 136 2.1e-06 1
MGI|MGI:1101759 - symbol:Rnf2 "ring finger protein 2" spe... 136 2.1e-06 1
RGD|1306904 - symbol:Pcgf6 "polycomb group ring finger 6"... 136 2.3e-06 1
RGD|1562871 - symbol:RGD1562871 "similar to BMI1-like pro... 131 2.6e-06 1
ZFIN|ZDB-GENE-030131-5243 - symbol:rnf2 "ring finger prot... 134 3.5e-06 1
UNIPROTKB|E1BJL2 - symbol:PCGF6 "Uncharacterized protein"... 133 4.9e-06 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 111 7.4e-06 1
UNIPROTKB|F1S3N6 - symbol:RNF2 "Uncharacterized protein" ... 131 7.6e-06 1
UNIPROTKB|E2RE60 - symbol:PCGF6 "Uncharacterized protein"... 129 1.4e-05 1
UNIPROTKB|Q9BYE7 - symbol:PCGF6 "Polycomb group RING fing... 129 1.4e-05 1
MGI|MGI:1918291 - symbol:Pcgf6 "polycomb group ring finge... 129 1.4e-05 1
UNIPROTKB|J9P0C4 - symbol:PCGF6 "Uncharacterized protein"... 129 1.7e-05 1
UNIPROTKB|F1NDM6 - symbol:PCGF6 "Uncharacterized protein"... 125 2.7e-05 1
MGI|MGI:1921615 - symbol:Lonrf3 "LON peptidase N-terminal... 131 2.8e-05 1
TAIR|locus:2133109 - symbol:BRCA1 "breast cancer suscepti... 98 2.8e-05 2
UNIPROTKB|E1BSU9 - symbol:LOC416147 "Uncharacterized prot... 118 3.4e-05 2
UNIPROTKB|Q5D7H8 - symbol:TRIM5 "Tripartite motif-contain... 126 5.5e-05 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 102 7.0e-05 1
WARNING: Descriptions of 25 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2033103 [details] [associations]
symbol:DRIP1 "DREB2A-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0051865
"protein autoubiquitination" evidence=IDA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 EMBL:AC011001 EMBL:BX815334
EMBL:BT033132 IPI:IPI00534763 IPI:IPI00536628 PIR:E86202
RefSeq:NP_172162.3 RefSeq:NP_973775.1 UniGene:At.28756
ProteinModelPortal:Q9M9Y4 SMR:Q9M9Y4 IntAct:Q9M9Y4 PaxDb:Q9M9Y4
PRIDE:Q9M9Y4 EnsemblPlants:AT1G06770.1 GeneID:837188
KEGG:ath:AT1G06770 TAIR:At1g06770 eggNOG:NOG277991
HOGENOM:HOG000240404 InParanoid:Q3EDH5 KO:K16277 OMA:LNKFTQN
PhylomeDB:Q9M9Y4 ProtClustDB:CLSN2688579 Genevestigator:Q9M9Y4
Uniprot:Q9M9Y4
Length = 421
Score = 631 (227.2 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 136/253 (53%), Positives = 175/253 (69%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG 70
++KVK+ET+ AC++C +C+++LR+ATTIS CLHTFCRKCIYEK++++E + CPVCNIDLG
Sbjct: 2 MIKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLG 61
Query: 71 CLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQ 130
P+EKLRPDHNLQD+RAKIF KRRKV+AP + +SLP KRKERS+SSLVVSTP V
Sbjct: 62 STPLEKLRPDHNLQDLRAKIFALKRRKVKAPGI---VSLPGKRKERSISSLVVSTPMVSA 118
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLED--KKESSIEDHPM-SSSSPDSLNKNAQNRRQE 187
G T +RTK TRK LR G + E KKE S D + S+SSPD+LNK QN+RQ
Sbjct: 119 QAGTTRRRTKAPTRKE--LRN-GSLAERTVKKEESSGDELLESTSSPDTLNKFTQNKRQS 175
Query: 188 SYKAEPSSEQGPNKVG-EITEAKADLWTPLNCLVEAANRTKSSKSNSQGPSLAKTDLHNF 246
+ S NK G E ++K D W PLN LVE AN TK KS++ S +K++ N
Sbjct: 176 KKSCKESISNKENKDGDEPWDSKMD-WKPLNFLVEVANGTKPLKSSASQGSGSKSEHANV 234
Query: 247 PDSEVFMPETKVK 259
++ +TK K
Sbjct: 235 SRNQFQGSKTKTK 247
Score = 129 (50.5 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 38/111 (34%), Positives = 47/111 (42%)
Query: 259 KVELPNSPGGEICSSKTKMKEHGLKTKYQNDK--NGIGLHPGPMXXXXXXXXXXXEVGTE 316
K E N + SKTK K K K ++DK NG + T
Sbjct: 228 KSEHANVSRNQFQGSKTKTKNKKRKCKREDDKSNNGDPTTSETVTPKRMRTTQRKRSATT 287
Query: 317 ESCXXXXXXXXXXXXKYKRRNTPIWFSLVASEDQKGDGSLPQISTCYLRIK 367
K +RRN P+WFSLVAS DQ+G SLPQI +LRI+
Sbjct: 288 LGDSRNLPQPDESSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIR 338
>TAIR|locus:2064392 [details] [associations]
symbol:DRIP2 "DREB2A-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0051865 "protein autoubiquitination"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009414
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0051865 eggNOG:NOG277991
HOGENOM:HOG000240404 KO:K16277 ProtClustDB:CLSN2688579 EMBL:U93215
EMBL:AY045618 EMBL:BT000505 IPI:IPI00544240 PIR:B84710
RefSeq:NP_565702.1 UniGene:At.14726 ProteinModelPortal:Q94AY3
SMR:Q94AY3 IntAct:Q94AY3 EnsemblPlants:AT2G30580.1 GeneID:817608
KEGG:ath:AT2G30580 TAIR:At2g30580 InParanoid:Q94AY3 OMA:NASHNDV
PhylomeDB:Q94AY3 Genevestigator:Q94AY3 Uniprot:Q94AY3
Length = 420
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 150/281 (53%), Positives = 189/281 (67%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG 70
V KVKRET+ ACMTCPLC+ LLR+ATTIS CLHTFCRKCIYEK++++E + CPVC+IDLG
Sbjct: 6 VAKVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLG 65
Query: 71 CLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQ 130
P+EKLRPDH LQD+RAK+FP KR+K +APEV+ SISLPAKRKERS+SSLVVSTP+V
Sbjct: 66 GTPLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSA 125
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLED--KKESSI-EDHPMSSSSPDSLNKNAQNRRQE 187
G TGKRTK +TRK +RG G + KKE +DH S+SSP++L K QN+RQ
Sbjct: 126 QAGTTGKRTKAATRKD--VRGSGSFTKRTVKKEEEFGDDHVESASSPETLKKFTQNKRQS 183
Query: 188 SYKAEP--SSEQGPNK-VGEITEAKADLWTPLNCLVEAANRTKSSKSNSQGPSLAKTDLH 244
SY A P S NK V E ++K LW PLN LV+ AN TK KS S D+
Sbjct: 184 SY-ANPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTKDPKSELGNAS--HNDVQ 240
Query: 245 NFPDSEVFMPETKVKVELPNSPGGEICSSKTKMKEHGLKTK 285
++ + K K+E S G+ +S+T + +T+
Sbjct: 241 G-SKTKTKDHKRKCKLEEEISNNGDPTTSETATLKRTRRTR 280
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 259 KVELPNSPGGEICSSKTKMKEHGLKTKYQNDKNGIGLHPGPMXXXXXXXXXXXEVGTEES 318
K EL N+ ++ SKTK K+H K K + + + G P + S
Sbjct: 228 KSELGNASHNDVQGSKTKTKDHKRKCKLEEEISNNG---DPTTSETATLKRTRRTRRKRS 284
Query: 319 CXXXXXXX----XXXXXKYKRRNTPIWFSLVASEDQKGDGSLPQISTCYLRIK 367
K +RRN +WFSLVAS +Q+G+ SLPQI YLRI+
Sbjct: 285 STFGDSRIPLLPGAASLKQERRNGHVWFSLVASSNQEGEASLPQIPANYLRIR 337
>TAIR|locus:2094608 [details] [associations]
symbol:AT3G23060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG304672 EMBL:AB026655 KO:K16277 EMBL:AY099845
EMBL:BT006623 IPI:IPI00546320 RefSeq:NP_188946.2 UniGene:At.37773
UniGene:At.67676 ProteinModelPortal:Q9LS86 SMR:Q9LS86 IntAct:Q9LS86
PRIDE:Q9LS86 EnsemblPlants:AT3G23060.1 GeneID:821880
KEGG:ath:AT3G23060 TAIR:At3g23060 HOGENOM:HOG000153088
InParanoid:Q9LS86 OMA:NKFINER PhylomeDB:Q9LS86
ProtClustDB:CLSN2917950 Genevestigator:Q9LS86 Uniprot:Q9LS86
Length = 480
Score = 261 (96.9 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 49/120 (40%), Positives = 76/120 (63%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG 70
+ KV + ++ C+ CP+C + ++ATTIS CLHTFCR CI K +E + CPVCN++LG
Sbjct: 2 LTKVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLG 61
Query: 71 CLPVEKLRPDHNLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKV 128
P+EKLR D QD++ KI+ + K P+ + + +K+K +S +SL VS+ +V
Sbjct: 62 VFPLEKLRSDCTWQDLKLKIYRAMMESLKKAGPKTVAASVKSSKKKRKSRTSLRVSSSRV 121
Score = 82 (33.9 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 335 RRNTPIWFSLVASEDQKGDGSLPQISTCYLRIK 367
R N P+WFSL S+ Q + LP I+ C +R+K
Sbjct: 360 RNNNPVWFSLKPSKTQNIEMLLPPITACCIRVK 392
>UNIPROTKB|I3LAF0 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:FP102972
Ensembl:ENSSSCT00000030851 Uniprot:I3LAF0
Length = 203
Score = 160 (61.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
Score = 55 (24.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK ++ N
Sbjct: 99 KLGLEVPGDVKGETCSAKQHLDSHRNGETKAEDSSN 134
>UNIPROTKB|F1NLA3 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AADN02065914
IPI:IPI00588017 Ensembl:ENSGALT00000024747 Uniprot:F1NLA3
Length = 245
Score = 165 (63.1 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LCN L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 8 KIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 65
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 66 HPLQYIGHDRTMQDIVYKLVP 86
Score = 52 (23.4 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK + N
Sbjct: 102 KLGMEVPGDIKGETCSAKQHLDSHRNGETKTDENSN 137
>UNIPROTKB|Q5T8Z4 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403 UniGene:Hs.731287
HGNC:HGNC:1066 IPI:IPI00646013 SMR:Q5T8Z4 Ensembl:ENST00000442508
Uniprot:Q5T8Z4
Length = 150
Score = 142 (55.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>MGI|MGI:1916837 [details] [associations]
symbol:Pcgf3 "polycomb group ring finger 3" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1916837
Pfam:PF00097 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:10336 KO:K11488 OMA:THLKKFI
OrthoDB:EOG49ZXPZ EMBL:AK033609 EMBL:AK089091 EMBL:BC049266
IPI:IPI00225141 IPI:IPI00471142 RefSeq:NP_766304.2
UniGene:Mm.261218 UniGene:Mm.486543 ProteinModelPortal:Q8BTQ0
SMR:Q8BTQ0 IntAct:Q8BTQ0 PhosphoSite:Q8BTQ0 PRIDE:Q8BTQ0
Ensembl:ENSMUST00000046975 Ensembl:ENSMUST00000112597 GeneID:69587
KEGG:mmu:69587 UCSC:uc008yod.1 UCSC:uc008yoe.1 InParanoid:Q8BTQ0
NextBio:329856 Bgee:Q8BTQ0 CleanEx:MM_PCGF3 Genevestigator:Q8BTQ0
Uniprot:Q8BTQ0
Length = 241
Score = 160 (61.4 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
Score = 53 (23.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEHGLKTKYQNDKN 291
K+ +E+P GE CS+K + +TK ++ N
Sbjct: 99 KLGMEVPGDIKGEACSAKQHLDPRNGETKADDNSN 133
>UNIPROTKB|Q5T8Z6 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 GO:GO:0016574
GO:GO:0033092 GO:GO:0021903 GO:GO:0048103 EMBL:AL158211
UniGene:Hs.380403 UniGene:Hs.731287 HGNC:HGNC:1066
HOGENOM:HOG000231946 IPI:IPI00640733 SMR:Q5T8Z6 MINT:MINT-1403210
Ensembl:ENST00000416820 HOVERGEN:HBG071649 Uniprot:Q5T8Z6
Length = 105
Score = 142 (55.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 46 (21.3 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 177 LNKNAQNRRQESYKAEPSSE 196
L KN RR++ Y A PS++
Sbjct: 86 LFKNEMKRRRDFYAAHPSAD 105
>UNIPROTKB|Q3KNV8 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 EMBL:CH471131 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 CTD:10336 KO:K11488 EMBL:AJ001019 EMBL:BC107061
IPI:IPI00007279 IPI:IPI00827991 RefSeq:NP_006306.2
UniGene:Hs.144309 UniGene:Hs.731755 ProteinModelPortal:Q3KNV8
SMR:Q3KNV8 IntAct:Q3KNV8 STRING:Q3KNV8 PhosphoSite:Q3KNV8
DMDM:121942537 PRIDE:Q3KNV8 Ensembl:ENST00000362003
Ensembl:ENST00000470161 Ensembl:ENST00000505655 GeneID:10336
KEGG:hsa:10336 UCSC:uc003gbe.3 GeneCards:GC04P000691
HGNC:HGNC:10066 HPA:HPA018487 neXtProt:NX_Q3KNV8 PharmGKB:PA34433
InParanoid:Q3KNV8 OMA:THLKKFI OrthoDB:EOG49ZXPZ ChiTaRS:PCGF3
GenomeRNAi:10336 NextBio:39203 ArrayExpress:Q3KNV8 Bgee:Q3KNV8
CleanEx:HS_PCGF3 Genevestigator:Q3KNV8 Uniprot:Q3KNV8
Length = 242
Score = 160 (61.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
Score = 52 (23.4 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK + N
Sbjct: 99 KLGMEVPGDIKGETCSAKQHLDSHRNGETKADDSSN 134
>UNIPROTKB|Q2KJ29 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC105550 IPI:IPI00718391 RefSeq:NP_001040032.1
UniGene:Bt.13972 ProteinModelPortal:Q2KJ29 SMR:Q2KJ29 PRIDE:Q2KJ29
GeneID:615967 KEGG:bta:615967 CTD:10336 InParanoid:Q2KJ29 KO:K11488
NextBio:20899886 Uniprot:Q2KJ29
Length = 242
Score = 160 (61.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
Score = 51 (23.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK + N
Sbjct: 99 KLGLEVPGDIKGETCSAKQHLDPHRNGETKADDSSN 134
>UNIPROTKB|J9P325 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:THLKKFI EMBL:AAEX03002650
Ensembl:ENSCAFT00000044431 Uniprot:J9P325
Length = 269
Score = 160 (61.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
Score = 52 (23.4 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK + N
Sbjct: 99 KLGMEVPGDVKGETCSAKQHLDPHRNGETKADDSSN 134
Score = 47 (21.6 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 27/117 (23%), Positives = 46/117 (39%)
Query: 179 KNAQNRRQESYKAEPSSEQGPNKVGEITEAKADLWTPLNCLVEA---ANRTKSSKSNSQG 235
+ A+ R+Q + + E + GE AK L N +A +N+ + + +
Sbjct: 86 QEAEMRKQRDFYHKLGMEVPGDVKGETCSAKQHLDPHRNGETKADDSSNKEAAEEKQEED 145
Query: 236 PSLAKTDLHNFPDSEVFM---PETKVKVE---LPNSPGGEICSSKTKMKEHGLKTKY 286
++D + V PE K ++E L +P IC K GLK K+
Sbjct: 146 NDYHRSD-EQLAEKHVLALKHPERK-RIEAQTLHTTPQVSICLECNSSKLRGLKRKW 200
>UNIPROTKB|C9J3G7 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HOGENOM:HOG000231946
HGNC:HGNC:10066 ChiTaRS:PCGF3 EMBL:AC107464 IPI:IPI00878168
ProteinModelPortal:C9J3G7 SMR:C9J3G7 STRING:C9J3G7
Ensembl:ENST00000433814 ArrayExpress:C9J3G7 Bgee:C9J3G7
Uniprot:C9J3G7
Length = 109
Score = 160 (61.4 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
>UNIPROTKB|F1PGG1 [details] [associations]
symbol:PCGF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03002650
Ensembl:ENSCAFT00000026535 Uniprot:F1PGG1
Length = 286
Score = 160 (61.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 49 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 106
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 107 HPLQYIGHDRTMQDIVYKLVP 127
Score = 52 (23.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 257 KVKVELPNSPGGEICSSKTKMKEH-GLKTKYQNDKN 291
K+ +E+P GE CS+K + H +TK + N
Sbjct: 143 KLGMEVPGDVKGETCSAKQHLDPHRNGETKADDSSN 178
>RGD|1307403 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000151 "ubiquitin ligase complex" evidence=ISO] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006959 "humoral immune
response" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0016573 "histone acetylation" evidence=ISO] [GO:0016574
"histone ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030890
"positive regulation of B cell proliferation" evidence=ISO]
[GO:0031519 "PcG protein complex" evidence=ISO] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=ISO] [GO:0035102 "PRC1 complex" evidence=ISO] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0048103 "somatic stem cell division" evidence=ISO] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=ISO]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISO] [GO:0071535 "RING-like zinc finger domain
binding" evidence=ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 RGD:1307403 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00870411 Ensembl:ENSRNOT00000022315
UCSC:RGD:1307403 Uniprot:D3ZLC8
Length = 200
Score = 142 (55.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|Q07G17 [details] [associations]
symbol:pcgf3 "Polycomb group RING finger protein 3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:10336 KO:K11488
EMBL:CR855442 RefSeq:NP_001016847.1 UniGene:Str.21149
ProteinModelPortal:Q07G17 SMR:Q07G17 GeneID:549601 KEGG:xtr:549601
Xenbase:XB-GENE-987640 Uniprot:Q07G17
Length = 242
Score = 165 (63.1 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LCN L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
>UNIPROTKB|Q5T8Z1 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA] [GO:0033092 "positive regulation of
immature T cell proliferation in thymus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0043066 GO:GO:0007420 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0001701 GO:GO:0016573 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0006959 GO:GO:0048704 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0031519 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0016574 GO:GO:0033092
GO:GO:0021903 GO:GO:0048103 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643590 SMR:Q5T8Z1
IntAct:Q5T8Z1 Ensembl:ENST00000417470 Uniprot:Q5T8Z1
Length = 207
Score = 142 (55.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|E1BAF7 [details] [associations]
symbol:E1BAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 IPI:IPI00718391 OMA:THLKKFI
EMBL:DAAA02018518 EMBL:DAAA02018519 EMBL:DAAA02018520
EMBL:DAAA02018521 EMBL:DAAA02018522 Ensembl:ENSBTAT00000018621
Uniprot:E1BAF7
Length = 242
Score = 160 (61.4 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I +
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIHQS 62
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 63 HPLQYIGHDRTMQDIVYKLVP 83
>UNIPROTKB|Q28H21 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0031519 "PcG
protein complex" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
CTD:84759 KO:K11487 EMBL:CR761098 RefSeq:NP_001016417.2
UniGene:Str.20413 ProteinModelPortal:Q28H21 SMR:Q28H21
GeneID:549171 KEGG:xtr:549171 Xenbase:XB-GENE-6454077
Uniprot:Q28H21
Length = 259
Score = 161 (61.7 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R VVKVK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 23 MDPLRN--EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSK 78
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 79 YCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVP 111
>UNIPROTKB|Q4QR06 [details] [associations]
symbol:pcgf1 "Polycomb group RING finger protein 1"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 CTD:84759 KO:K11487 EMBL:BC097736
RefSeq:NP_001089498.2 UniGene:Xl.19589 ProteinModelPortal:Q4QR06
GeneID:734550 KEGG:xla:734550 Xenbase:XB-GENE-6255892
Uniprot:Q4QR06
Length = 259
Score = 161 (61.7 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R VVKVK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 23 MDPLRN--EEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSK 78
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 79 YCPLCNIKIHETQPLLNLKLDRVMQDIVYKLVP 111
>FB|FBgn0002283 [details] [associations]
symbol:l(3)73Ah "lethal (3) 73Ah" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:AE014296 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
eggNOG:NOG277991 KO:K11488 OMA:THLKKFI EMBL:AY071030 PIR:JC4296
RefSeq:NP_001246797.1 RefSeq:NP_524933.1 UniGene:Dm.1746 SMR:Q9VV77
IntAct:Q9VV77 MINT:MINT-320154 STRING:Q9VV77
EnsemblMetazoa:FBtr0075311 EnsemblMetazoa:FBtr0307336 GeneID:48903
KEGG:dme:Dmel_CG4195 UCSC:CG4195-RA FlyBase:FBgn0002283
InParanoid:Q9VV77 OrthoDB:EOG47PVNS ChiTaRS:l(3)73Ah
GenomeRNAi:48903 NextBio:839572 Uniprot:Q9VV77
Length = 222
Score = 154 (59.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC-NIDLGC 71
+VK +T+ +TC +C +ATT++ CLHTFC+ C+ + L EE CP C NI
Sbjct: 4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQS 61
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P++ + D +QDI K+ P
Sbjct: 62 HPLQYISFDRTMQDIVYKLVP 82
>UNIPROTKB|Q5T8Z5 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL158211 UniGene:Hs.380403
UniGene:Hs.731287 HGNC:HGNC:1066 IPI:IPI00643353 SMR:Q5T8Z5
Ensembl:ENST00000456675 Uniprot:Q5T8Z5
Length = 92
Score = 142 (55.0 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
>MGI|MGI:88174 [details] [associations]
symbol:Bmi1 "Bmi1 polycomb ring finger oncogene" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;IDA] [GO:0001501 "skeletal
system development" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006959 "humoral immune response"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0009987 "cellular
process" evidence=TAS] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016574
"histone ubiquitination" evidence=IDA] [GO:0016604 "nuclear body"
evidence=IDA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IMP] [GO:0030890 "positive regulation of B cell
proliferation" evidence=IMP] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0033092 "positive regulation of immature T
cell proliferation in thymus" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IGI] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IMP] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=ISO] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IGI] [GO:0048706 "embryonic skeletal system
development" evidence=IGI] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISO] [GO:0071535
"RING-like zinc finger domain binding" evidence=ISO]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 MGI:MGI:88174
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:M64067 EMBL:M64068 EMBL:M64279 EMBL:BC053708
EMBL:BC056384 IPI:IPI00114786 PIR:A39523 RefSeq:NP_031578.2
UniGene:Mm.289584 PDB:2CKL PDBsum:2CKL ProteinModelPortal:P25916
SMR:P25916 DIP:DIP-132N IntAct:P25916 STRING:P25916
PhosphoSite:P25916 PRIDE:P25916 Ensembl:ENSMUST00000028071
Ensembl:ENSMUST00000051929 GeneID:12151 KEGG:mmu:12151
InParanoid:P25916 EvolutionaryTrace:P25916 NextBio:280483
Bgee:P25916 CleanEx:MM_BMI1 Genevestigator:P25916
GermOnline:ENSMUSG00000026739 Uniprot:P25916
Length = 324
Score = 142 (55.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 57 (25.1 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITEAKADLWTP---LNCLVEAANRTK-SS 229
L KN RR++ Y A PS++ G N+ GE+ + + + T ++ +E ++++
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVADEEKRIITDDEIISLSIEFFDQSRLDR 145
Query: 230 KSNSQGPSLAKTDLHNF--PDSEVFMPETKV---KVELPNSPGGEICSSKTKMKEH 280
K N + P D P + M K K+++PN+ ++ + +K++
Sbjct: 146 KVNKEKPKEEVNDKRYLRCPAAMTVMHLRKFLRSKMDIPNTFQIDVMYEEEPLKDY 201
>UNIPROTKB|C9JYD0 [details] [associations]
symbol:PCGF3 "Polycomb group RING finger protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC139887 HGNC:HGNC:10066 ChiTaRS:PCGF3
EMBL:AC107464 IPI:IPI00879042 ProteinModelPortal:C9JYD0 SMR:C9JYD0
STRING:C9JYD0 Ensembl:ENST00000427463 ArrayExpress:C9JYD0
Bgee:C9JYD0 Uniprot:C9JYD0
Length = 62
Score = 139 (54.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNI 67
K+K + A +TC LC+ L +ATT++ CLHTFCR C+ + L EE + CP C I
Sbjct: 5 KIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRI 57
>ZFIN|ZDB-GENE-060512-34 [details] [associations]
symbol:pcgf5b "polycomb group ring finger 5b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060512-34 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 KO:K11489 OrthoDB:EOG4NKBW6
EMBL:BC116619 IPI:IPI00630550 RefSeq:NP_001038700.1
UniGene:Dr.78700 ProteinModelPortal:Q1JPS1 SMR:Q1JPS1 STRING:Q1JPS1
Ensembl:ENSDART00000086211 GeneID:692252 KEGG:dre:692252 CTD:692252
InParanoid:Q1JPS1 OMA:FYQSYPM NextBio:20902468 Bgee:Q1JPS1
Uniprot:Q1JPS1
Length = 232
Score = 151 (58.2 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+TC +C L + TT++ CLHTFC+ CI + E+++ CP C I + P+E LR D+
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHF--EDSNDCPKCGIQVHETNPLEMLRLDN 73
Query: 82 NLQDIRAKIFPFKRRKVQAPE 102
L+++ K+ P R K Q E
Sbjct: 74 TLEEVIFKLVPGLREKEQQQE 94
>RGD|1549782 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=IEA;ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 152 (58.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 13 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 68
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 69 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 101
>UNIPROTKB|Q6DLV9 [details] [associations]
symbol:Pcgf1 "Polycomb group RING finger protein 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 RGD:1549782 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759 KO:K11487
OrthoDB:EOG4894N6 EMBL:AY662670 IPI:IPI00464918
RefSeq:NP_001007001.1 UniGene:Rn.203514 ProteinModelPortal:Q6DLV9
SMR:Q6DLV9 PhosphoSite:Q6DLV9 PRIDE:Q6DLV9 GeneID:312480
KEGG:rno:312480 UCSC:RGD:1549782 InParanoid:Q6DLV9 NextBio:664916
Genevestigator:Q6DLV9 Uniprot:Q6DLV9
Length = 243
Score = 152 (58.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 13 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 68
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 69 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 101
>UNIPROTKB|F1SNT4 [details] [associations]
symbol:F1SNT4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:CU468647
Ensembl:ENSSSCT00000009065 OMA:DVNPHIV Uniprot:F1SNT4
Length = 259
Score = 153 (58.9 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 35/89 (39%), Positives = 50/89 (56%)
Query: 5 RTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPV 64
R R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + + CP+
Sbjct: 27 RYGTREEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSKYCPM 84
Query: 65 CNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CNI + P+ L+ D +QDI K+ P
Sbjct: 85 CNIKIHETQPLLNLKLDRVMQDIVYKLVP 113
>RGD|1583513 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
"centrosome" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1583513 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:AC127789
IPI:IPI00763179 Ensembl:ENSRNOT00000025020 UCSC:RGD:1583513
ArrayExpress:E9PTD5 Uniprot:E9PTD5
Length = 236
Score = 139 (54.0 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFPFKRRK 97
+ P+E LR D+ L++I K+ P R +
Sbjct: 57 GNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQ 89
Score = 48 (22.0 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 177 LNKNAQNRRQESYKAEPSSEQGPNKVGEITEAKAD 211
L + R E +K E G ++V ++ ++KAD
Sbjct: 86 LREQELQRELEFWKKNKPQENGQDEVSKVDKSKAD 120
>UNIPROTKB|F1MM90 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GO:GO:0035518 GO:GO:0031519 GeneTree:ENSGT00550000074463
IPI:IPI00687683 OMA:NEHIVCY EMBL:DAAA02030322
Ensembl:ENSBTAT00000022090 Uniprot:F1MM90
Length = 259
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 25 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 80
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 81 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113
>UNIPROTKB|E2R984 [details] [associations]
symbol:PCGF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
GeneTree:ENSGT00550000074463 CTD:84759 KO:K11487 OMA:NEHIVCY
EMBL:AAEX03010965 RefSeq:XP_532995.2 ProteinModelPortal:E2R984
Ensembl:ENSCAFT00000013424 GeneID:475785 KEGG:cfa:475785
Uniprot:E2R984
Length = 259
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 25 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 80
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 81 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113
>UNIPROTKB|Q9BSM1 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 HOVERGEN:HBG052826 EMBL:AC005041 eggNOG:NOG277991
HOGENOM:HOG000231946 CTD:84759 KO:K11487 OrthoDB:EOG4894N6
EMBL:AF087884 EMBL:BC004952 IPI:IPI00902987 IPI:IPI00921560
RefSeq:NP_116062.2 UniGene:Hs.316750 ProteinModelPortal:Q9BSM1
SMR:Q9BSM1 IntAct:Q9BSM1 MINT:MINT-1460887 STRING:Q9BSM1
PhosphoSite:Q9BSM1 DMDM:223590124 PRIDE:Q9BSM1 DNASU:84759
Ensembl:ENST00000233630 GeneID:84759 KEGG:hsa:84759 UCSC:uc002sly.3
GeneCards:GC02M074732 HGNC:HGNC:17615 HPA:HPA011356 MIM:610231
neXtProt:NX_Q9BSM1 PharmGKB:PA134976631 InParanoid:Q9BSM1
OMA:NEHIVCY ChiTaRS:PCGF1 GenomeRNAi:84759 NextBio:74901
Bgee:Q9BSM1 CleanEx:HS_PCGF1 Genevestigator:Q9BSM1 Uniprot:Q9BSM1
Length = 259
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 25 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 80
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 81 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113
>MGI|MGI:1917087 [details] [associations]
symbol:Pcgf1 "polycomb group ring finger 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1917087 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035518 GO:GO:0031519
HSSP:P25916 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AC104324 eggNOG:NOG277991 HOGENOM:HOG000231946 CTD:84759
KO:K11487 OrthoDB:EOG4894N6 OMA:NEHIVCY EMBL:BC028560
IPI:IPI00153112 RefSeq:NP_932109.1 UniGene:Mm.12261
ProteinModelPortal:Q8R023 SMR:Q8R023 IntAct:Q8R023 STRING:Q8R023
PhosphoSite:Q8R023 PRIDE:Q8R023 Ensembl:ENSMUST00000092614
Ensembl:ENSMUST00000165164 GeneID:69837 KEGG:mmu:69837
UCSC:uc009cmg.1 InParanoid:Q8R023 NextBio:330455 Bgee:Q8R023
CleanEx:MM_PCGF1 Genevestigator:Q8R023 Uniprot:Q8R023
Length = 259
Score = 152 (58.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 25 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 80
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ L+ D +QDI K+ P
Sbjct: 81 YCPMCNIKIHETQPLLNLKLDRVMQDIVYKLVP 113
>MGI|MGI:1101770 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10090 "Mus
musculus" [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IGI;IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IGI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101770 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0009952
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
EMBL:AF100956 GO:GO:0035518 GO:GO:0031519 GO:GO:0035102
GO:GO:0016574 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:Y12881 EMBL:AK154962 EMBL:AK155509 EMBL:CT010219 EMBL:BC009070
EMBL:BC082771 IPI:IPI00344616 IPI:IPI00742283 IPI:IPI00742392
RefSeq:NP_033092.3 UniGene:Mm.20343 ProteinModelPortal:O35730
SMR:O35730 IntAct:O35730 MINT:MINT-158295 STRING:O35730
PhosphoSite:O35730 PaxDb:O35730 PRIDE:O35730
Ensembl:ENSMUST00000025183 GeneID:19763 KEGG:mmu:19763
UCSC:uc008cas.2 InParanoid:O35730 NextBio:297212 Bgee:O35730
CleanEx:MM_RING1 Genevestigator:O35730
GermOnline:ENSMUSG00000024325 Uniprot:O35730
Length = 406
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/174 (28%), Positives = 76/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + A + G G + E ED S S+PDS A R
Sbjct: 151 HRAQRVRRPMPGSDQTATMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 202
>UNIPROTKB|Q5SDR3 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 KO:K11459 CTD:648 EMBL:AY616032 IPI:IPI00591599
RefSeq:NP_001007989.1 UniGene:Gga.22845 ProteinModelPortal:Q5SDR3
SMR:Q5SDR3 GeneID:493647 KEGG:gga:493647 NextBio:20865453
Uniprot:Q5SDR3
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|Q32KX7 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9913
"Bos taurus" [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0051443 "positive regulation
of ubiquitin-protein ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0048103 "somatic stem
cell division" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0033092 "positive regulation of immature T cell
proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0043066 GO:GO:0007420 GO:GO:0005730
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GO:GO:0031519 HSSP:P25916 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG EMBL:BC109871
IPI:IPI00710372 RefSeq:NP_001033161.1 UniGene:Bt.89241
ProteinModelPortal:Q32KX7 SMR:Q32KX7 STRING:Q32KX7 PRIDE:Q32KX7
Ensembl:ENSBTAT00000020705 GeneID:510666 KEGG:bta:510666 CTD:648
InParanoid:Q32KX7 OMA:SNHQSSF NextBio:20869556 GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
Uniprot:Q32KX7
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|E2RTM4 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0048146
"positive regulation of fibroblast proliferation" evidence=IEA]
[GO:0048103 "somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 KO:K11459 CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:AAEX03001194 RefSeq:XP_858578.1
ProteinModelPortal:E2RTM4 Ensembl:ENSCAFT00000006682 GeneID:487097
KEGG:cfa:487097 Uniprot:E2RTM4
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|P35226 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0007420
"brain development" evidence=IEA] [GO:0016573 "histone acetylation"
evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0033092
"positive regulation of immature T cell proliferation in thymus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048103 "somatic stem cell division"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0071535 "RING-like zinc finger domain
binding" evidence=IPI] [GO:0000151 "ubiquitin ligase complex"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=IDA] [GO:0030097 "hemopoiesis" evidence=IEP]
[GO:0031519 "PcG protein complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0035102 "PRC1 complex" evidence=IDA]
[GO:0007379 "segment specification" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IMP] [GO:0010468 "regulation of
gene expression" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0043066 GO:GO:0007420 GO:GO:0005730 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0006351 GO:GO:0003682 GO:GO:0000122 EMBL:CH471072
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0007379 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG CTD:648 OMA:SNHQSSF
GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:L13689 EMBL:AK313235 EMBL:AL158211 EMBL:BC011652
EMBL:AH004292 IPI:IPI00017299 PIR:I54339 RefSeq:NP_001190991.1
RefSeq:NP_005171.4 UniGene:Hs.380403 UniGene:Hs.731287 PDB:2H0D
PDB:3RPG PDBsum:2H0D PDBsum:3RPG ProteinModelPortal:P35226
SMR:P35226 DIP:DIP-41879N IntAct:P35226 MINT:MINT-158260
STRING:P35226 PhosphoSite:P35226 DMDM:22258801 PaxDb:P35226
PRIDE:P35226 DNASU:648 Ensembl:ENST00000376663 GeneID:100532731
GeneID:648 KEGG:hsa:100532731 KEGG:hsa:648 UCSC:uc001irh.3
CTD:100532731 GeneCards:GC10P022605 HGNC:HGNC:1066 HPA:CAB011120
HPA:HPA030472 MIM:164831 neXtProt:NX_P35226 PharmGKB:PA25376
InParanoid:P35226 PhylomeDB:P35226 EvolutionaryTrace:P35226
NextBio:2628 ArrayExpress:P35226 Bgee:P35226 CleanEx:HS_BMI1
Genevestigator:P35226 GermOnline:ENSG00000168283 Uniprot:P35226
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|F2Z5D1 [details] [associations]
symbol:BMI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IEA] [GO:0048103
"somatic stem cell division" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0033092 "positive regulation of immature
T cell proliferation in thymus" evidence=IEA] [GO:0030890 "positive
regulation of B cell proliferation" evidence=IEA] [GO:0030097
"hemopoiesis" evidence=IEA] [GO:0021903 "rostrocaudal neural tube
patterning" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0016574 "histone ubiquitination" evidence=IEA] [GO:0016573
"histone acetylation" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0006959 "humoral immune response" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0003682 GO:GO:0000122
GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030097
GO:GO:0004842 GO:GO:0006959 GO:GO:0048146 GO:GO:0048704
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0051443
GeneTree:ENSGT00550000074463 OMA:SNHQSSF GO:GO:0035102
GO:GO:0016574 GO:GO:0033092 GO:GO:0021903 GO:GO:0048103
EMBL:CU855495 EMBL:JQ012762 Ensembl:ENSSSCT00000012128
Uniprot:F2Z5D1
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|Q5R8L2 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9601
"Pongo abelii" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
GO:GO:0005730 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0030890 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030097 GO:GO:0004842 GO:GO:0006959 GO:GO:0048146
GO:GO:0048704 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0051443 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 KO:K11459 CTD:648
OMA:SNHQSSF GO:GO:0035102 GO:GO:0016574 GO:GO:0033092 GO:GO:0021903
GO:GO:0048103 EMBL:CR859740 RefSeq:NP_001126098.1 UniGene:Pab.17470
ProteinModelPortal:Q5R8L2 SMR:Q5R8L2 PRIDE:Q5R8L2
Ensembl:ENSPPYT00000002567 GeneID:100173052 KEGG:pon:100173052
InParanoid:Q5R8L2 Uniprot:Q5R8L2
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|Q9TST0 [details] [associations]
symbol:BMI1 "Polycomb complex protein BMI-1" species:9685
"Felis catus" [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0031519 "PcG
protein complex" evidence=ISS] [GO:0051443 "positive regulation of
ubiquitin-protein ligase activity" evidence=ISS] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005737
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0051443 GO:GO:0031519
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 CTD:648
EMBL:AJ132013 RefSeq:NP_001020133.1 ProteinModelPortal:Q9TST0
SMR:Q9TST0 GeneID:554342 KEGG:fca:554342 Uniprot:Q9TST0
Length = 326
Score = 142 (55.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRSDKTLQDIVYKLVP 84
Score = 51 (23.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y A PS++ G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAAHPSADAANGSNEDRGEVAD 119
>UNIPROTKB|A0JN86 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489
OrthoDB:EOG4NKBW6 OMA:FYQSYPM EMBL:BC126565 IPI:IPI00698156
RefSeq:NP_001071448.1 UniGene:Bt.59906 ProteinModelPortal:A0JN86
SMR:A0JN86 PRIDE:A0JN86 Ensembl:ENSBTAT00000006533 GeneID:528946
KEGG:bta:528946 CTD:84333 InParanoid:A0JN86
BioCyc:CATTLE:528946-MONOMER NextBio:20874930 Uniprot:A0JN86
Length = 255
Score = 150 (57.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVS 124
+ P+E LR D+ L++I K+ P R +++ + P + + +S V
Sbjct: 57 GNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQLERESEFWKKNKPQENGQDDMSK--VD 114
Query: 125 TPKVPQ 130
PKV +
Sbjct: 115 KPKVDE 120
>UNIPROTKB|Q91648 [details] [associations]
symbol:bmi1a "Polycomb complex protein BMI-1-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
KO:K11459 EMBL:U39959 EMBL:BC072892 PIR:I51694
RefSeq:NP_001081790.1 UniGene:Xl.6636 ProteinModelPortal:Q91648
SMR:Q91648 GeneID:398052 KEGG:xla:398052 CTD:398052
Xenbase:XB-GENE-6252040 Uniprot:Q91648
Length = 326
Score = 142 (55.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRADKTLQDIVYKLVP 84
Score = 50 (22.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITEAKADLWTP---LNCLVEAANRTKSSK 230
L K RR++ Y A PS++ G N+ GE+ + + T ++ +E ++ K+ +
Sbjct: 86 LFKGEMKRRRDFYAAHPSADVANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNKADR 145
Query: 231 SNSQGPSLAKT 241
S+ K+
Sbjct: 146 KGSKDKDKEKS 156
>UNIPROTKB|J9P2L6 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000045871 Uniprot:J9P2L6
Length = 229
Score = 147 (56.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 38/127 (29%), Positives = 65/127 (51%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFP-FKRRKVQAPEVMPSISLPAKRKERSLSSLVV 123
I + P+E LR D+ L++I K+ P + ++++ + P + + S V
Sbjct: 57 GIQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDTSK--V 114
Query: 124 STPKVPQ 130
PKV +
Sbjct: 115 DKPKVDE 121
>ZFIN|ZDB-GENE-030616-605 [details] [associations]
symbol:pcgf1 "polycomb group ring finger 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-030616-605 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AL831789 IPI:IPI00482456
Ensembl:ENSDART00000129432 Bgee:F1R1I1 Uniprot:F1R1I1
Length = 295
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG- 70
VK+K + L + C LC +ATTI+ CLHTFC+ CI + L + + CP+CNI +
Sbjct: 66 VKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHE 123
Query: 71 CLPVEKLRPDHNLQDIRAKIFP 92
P+ L+ D +QDI K+ P
Sbjct: 124 TQPLLNLKLDRVMQDIVYKLVP 145
>ZFIN|ZDB-GENE-080723-33 [details] [associations]
symbol:pcgf5a "polycomb group ring finger 5a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-080723-33 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
HOVERGEN:HBG052826 eggNOG:NOG277991 EMBL:BC163687 EMBL:BC163702
IPI:IPI00858490 RefSeq:NP_001122184.1 UniGene:Dr.134043
ProteinModelPortal:B3DK16 STRING:B3DK16 Ensembl:ENSDART00000104715
GeneID:562327 KEGG:dre:562327 CTD:562327 HOGENOM:HOG000231946
KO:K11489 OMA:EESNECP OrthoDB:EOG4NKBW6 NextBio:20884351
Bgee:B3DK16 Uniprot:B3DK16
Length = 234
Score = 147 (56.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+TC +C L + T ++ CLHTFC+ CI + EE++ CP C I + P+E LR D
Sbjct: 16 ITCSICRGYLIKPTAVTECLHTFCKSCIVQHF--EESNECPECGIQVHETNPLEMLRLDK 73
Query: 82 NLQDIRAKIFPFKRRKVQAPE 102
L++I K+ P R K + E
Sbjct: 74 TLEEIIFKLVPGLREKEEHQE 94
>UNIPROTKB|F1MUV0 [details] [associations]
symbol:RING1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:QSASKTW EMBL:DAAA02054894
EMBL:DAAA02054895 IPI:IPI00718372 Ensembl:ENSBTAT00000054269
ArrayExpress:F1MUV0 Uniprot:F1MUV0
Length = 382
Score = 153 (58.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 10 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 66
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 67 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 125
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 126 HRAQRVRRPMPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 177
>UNIPROTKB|I3LDV4 [details] [associations]
symbol:I3LDV4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0031519 "PcG protein complex" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
Ensembl:ENSSSCT00000029600 OMA:ISECSHT Uniprot:I3LDV4
Length = 269
Score = 149 (57.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 33/82 (40%), Positives = 48/82 (58%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG- 70
V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + + CP+CNI +
Sbjct: 36 VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSKYCPMCNIKIHE 93
Query: 71 CLPVEKLRPDHNLQDIRAKIFP 92
P+ L+ D +QDI K+ P
Sbjct: 94 TQPLLNLKLDRVMQDIVYKLVP 115
>UNIPROTKB|Q5TJF3 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9615 "Canis lupus familiaris" [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0031519 "PcG protein complex" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0048593 "camera-type
eye morphogenesis" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0035518 "histone
H2A monoubiquitination" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AJ630366 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 RefSeq:NP_001041593.1 UniGene:Cfa.40924
ProteinModelPortal:Q5TJF3 SMR:Q5TJF3 STRING:Q5TJF3
Ensembl:ENSCAFT00000001442 Ensembl:ENSCAFT00000044064 GeneID:607905
KEGG:cfa:607905 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 InParanoid:Q5TJF3 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 NextBio:20893594 Uniprot:Q5TJF3
Length = 406
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 151 HRAQRVRRPMPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 202
>UNIPROTKB|A5D9P0 [details] [associations]
symbol:RING1 "Ring finger protein 1" species:9823 "Sus
scrofa" [GO:0048593 "camera-type eye morphogenesis" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0035518 "histone H2A monoubiquitination"
evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4
EMBL:CT737383 EMBL:BX640585 RefSeq:NP_001177164.1 UniGene:Ssc.5967
ProteinModelPortal:A5D9P0 SMR:A5D9P0 STRING:A5D9P0
Ensembl:ENSSSCT00000001648 GeneID:100153162 KEGG:ssc:100153162
ArrayExpress:A5D9P0 Uniprot:A5D9P0
Length = 406
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 151 HRAQRVRRPMPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 202
>MGI|MGI:1923505 [details] [associations]
symbol:Pcgf5 "polycomb group ring finger 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1923505
Pfam:PF00097 Prosite:PS00518 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826 eggNOG:NOG277991
HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6 OMA:FYQSYPM
CTD:84333 EMBL:AK002387 EMBL:AK017984 EMBL:AK146133 EMBL:BC139258
EMBL:BC139259 EMBL:BC145590 IPI:IPI00135919 IPI:IPI00653832
RefSeq:NP_083784.1 UniGene:Mm.259180 UniGene:Mm.381165
UniGene:Mm.488093 UniGene:Mm.490414 ProteinModelPortal:Q3UK78
SMR:Q3UK78 IntAct:Q3UK78 PhosphoSite:Q3UK78 PRIDE:Q3UK78
Ensembl:ENSMUST00000062389 Ensembl:ENSMUST00000071267 GeneID:76073
KEGG:mmu:76073 UCSC:uc008hhi.1 UCSC:uc008hhk.1 InParanoid:Q3UK78
NextBio:344549 Bgee:Q3UK78 CleanEx:MM_PCGF5 Genevestigator:Q3UK78
Uniprot:Q3UK78
Length = 256
Score = 139 (54.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFPFKRRK 97
+ P+E LR D+ L++I K+ P R +
Sbjct: 57 GNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQ 89
Score = 45 (20.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 177 LNKNAQNRRQESYKAEPSSEQGPNKVGEITEAKAD 211
L + R E +K E G + + ++ ++KAD
Sbjct: 86 LREQELQRELEFWKKNKPQENGQDDISKVDKSKAD 120
>UNIPROTKB|F1PTU1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031519 "PcG protein complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0005813 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519
GeneTree:ENSGT00550000074463 EMBL:AAEX03015404 EMBL:AAEX03015405
EMBL:AAEX03015406 Ensembl:ENSCAFT00000011620 Uniprot:F1PTU1
Length = 252
Score = 147 (56.8 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 38/127 (29%), Positives = 65/127 (51%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFP-FKRRKVQAPEVMPSISLPAKRKERSLSSLVV 123
I + P+E LR D+ L++I K+ P + ++++ + P + + S V
Sbjct: 57 GIQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDTSK--V 114
Query: 124 STPKVPQ 130
PKV +
Sbjct: 115 DKPKVDE 121
>ZFIN|ZDB-GENE-040116-4 [details] [associations]
symbol:bmi1b "B lymphoma Mo-MLV insertion region 1b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IGI]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-040116-4 GO:GO:0046872
GO:GO:0008270 GO:GO:0021549 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463
HOGENOM:HOG000231945 HOVERGEN:HBG052826 EMBL:CR388093
IPI:IPI00513675 UniGene:Dr.26463 SMR:B0UXV8
Ensembl:ENSDART00000012487 Ensembl:ENSDART00000135417 OMA:PHISTIN
Uniprot:B0UXV8
Length = 326
Score = 146 (56.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 7 TARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCN 66
T ++K L + C LC +ATTI CLH+FC+ CI L E + CP+C+
Sbjct: 2 TMHRTTRIKITELNPHLMCVLCGGYFIDATTIVECLHSFCKMCIVRYL--ETSKYCPICD 59
Query: 67 IDLG-CLPVEKLRPDHNLQDIRAKIFP 92
+ + P+ +R D LQDI K+ P
Sbjct: 60 VQVHKTKPLLNIRSDKTLQDIVYKLVP 86
Score = 42 (19.8 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 177 LNKNAQNRRQESYKAEP-SSEQGPNKV-GEITE 207
L KN RR++ Y P + G N+ GE+++
Sbjct: 88 LFKNEMKRRRDFYAEHPVDATNGSNEDRGEVSD 120
>RGD|3576 [details] [associations]
symbol:Ring1 "ring finger protein 1" species:10116 "Rattus
norvegicus" [GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0001739 "sex chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009952 "anterior/posterior pattern specification"
evidence=IEA;ISO] [GO:0016574 "histone ubiquitination" evidence=ISO]
[GO:0016604 "nuclear body" evidence=ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=ISO;ISS]
[GO:0035102 "PRC1 complex" evidence=ISO;ISS] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048593 "camera-type eye morphogenesis" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Pfam:PF00097 RGD:3576 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0009952 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0048593 GO:GO:0000151 InterPro:IPR017907 GO:GO:0035518
GO:GO:0035102 EMBL:BX883042 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917 HOVERGEN:HBG079942
KO:K10695 OMA:QSASKTW OrthoDB:EOG4SXND4 EMBL:BC098635 EMBL:X95474
IPI:IPI00417840 IPI:IPI00742451 RefSeq:NP_997714.2 UniGene:Rn.116589
ProteinModelPortal:Q6MGB6 SMR:Q6MGB6 STRING:Q6MGB6
Ensembl:ENSRNOT00000000543 GeneID:309626 KEGG:rno:309626
UCSC:RGD:3576 InParanoid:Q6MGB6 NextBio:661076 Genevestigator:Q6MGB6
GermOnline:ENSRNOG00000000467 Uniprot:Q6MGB6
Length = 406
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 151 HRAQRVRRPMPGSDQTTTMSG-GEGEPGEGEGDGEDIS-SDSAPDSAPGPAPKR 202
>UNIPROTKB|F1PTT1 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 KO:K11489 OMA:FYQSYPM CTD:84333
EMBL:AAEX03015404 EMBL:AAEX03015405 EMBL:AAEX03015406
RefSeq:XP_543923.2 ProteinModelPortal:F1PTT1
Ensembl:ENSCAFT00000011621 GeneID:486794 KEGG:cfa:486794
Uniprot:F1PTT1
Length = 256
Score = 147 (56.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 38/127 (29%), Positives = 65/127 (51%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPHITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFP-FKRRKVQAPEVMPSISLPAKRKERSLSSLVV 123
I + P+E LR D+ L++I K+ P + ++++ + P + + S V
Sbjct: 57 GIQVHETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDDTSK--V 114
Query: 124 STPKVPQ 130
PKV +
Sbjct: 115 DKPKVDE 121
>UNIPROTKB|D4A0Y0 [details] [associations]
symbol:D4A0Y0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104499 EMBL:AC113720
IPI:IPI00359118 Ensembl:ENSRNOT00000030827 Uniprot:D4A0Y0
Length = 151
Score = 131 (51.2 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 17 ETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YEKLSDEEAD-CCPVCNIDLGCL 72
E ++ +TCP+C LL+E + C H+FCR CI YE + E + CPVC + C
Sbjct: 7 EMIKEEVTCPICLELLKEPVSTD-CNHSFCRACITINYESNRNTEGEGSCPVCRV---CY 62
Query: 73 PVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKER 116
LRP+ ++ +I ++ FK PE +++ A+ E+
Sbjct: 63 LFRNLRPNRHVANIVERLKGFK----SIPEEEQKVNVCAQHGEK 102
>UNIPROTKB|F1LUN6 [details] [associations]
symbol:F1LUN6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
IPI:IPI00562660 Ensembl:ENSRNOT00000032989 Uniprot:F1LUN6
Length = 167
Score = 131 (51.2 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
++C +C L +A TI+ CLHTFC+ CI + E ++ CP CNI + P LR D
Sbjct: 56 ISCSICKGYLIDAATITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHEAKPHNNLRMDP 113
Query: 82 NLQDIRAKI 90
LQ+I K+
Sbjct: 114 QLQNIVYKL 122
>UNIPROTKB|A1YER5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9595 "Gorilla gorilla gorilla" [GO:0031519 "PcG protein
complex" evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ976446 ProteinModelPortal:A1YER5
SMR:A1YER5 PRIDE:A1YER5 Uniprot:A1YER5
Length = 377
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 50/176 (28%), Positives = 76/176 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 62
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 131 HTGLTGKRT-KGSTRKAAALRGCGFMLEDKKESSIEDHPMSS-SSPDSLNKNAQNR 184
H +R GS + G G D E + +SS S+PDS A R
Sbjct: 122 HRAQRVRRPIPGSDQTTTMSGGEG----DPGEGEGDGEDVSSDSAPDSAPGPAPKR 173
>UNIPROTKB|A1YFY1 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9597 "Pan paniscus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:DQ977176 ProteinModelPortal:A1YFY1
SMR:A1YFY1 Uniprot:A1YFY1
Length = 377
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 62
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 122 HRAQRVRRPIPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 173
>UNIPROTKB|A2T6X5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9598 "Pan troglodytes" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
CTD:6015 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:DQ977325 RefSeq:NP_001074951.1
UniGene:Ptr.3708 ProteinModelPortal:A2T6X5 SMR:A2T6X5 STRING:A2T6X5
Ensembl:ENSPTRT00000065372 GeneID:462604 KEGG:ptr:462604
InParanoid:A2T6X5 NextBio:20841844 Uniprot:A2T6X5
Length = 377
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 62
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 122 HRAQRVRRPIPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 173
>UNIPROTKB|Q8WMN5 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9544 "Macaca mulatta" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0016607 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0035102 CTD:6015
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OrthoDB:EOG4SXND4 EMBL:AJ421778 RefSeq:NP_001108431.1
UniGene:Mmu.17368 ProteinModelPortal:Q8WMN5 SMR:Q8WMN5
STRING:Q8WMN5 GeneID:718137 KEGG:mcc:718137 InParanoid:Q8WMN5
NextBio:19978408 Uniprot:Q8WMN5
Length = 377
Score = 151 (58.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 6 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 62
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 63 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 121
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 122 HRAQRVRRPIPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 173
>UNIPROTKB|Q06587 [details] [associations]
symbol:RING1 "E3 ubiquitin-protein ligase RING1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0016568 "chromatin modification" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031519 "PcG protein complex" evidence=IDA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0009952 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0048593 GO:GO:0000151
InterPro:IPR017907 EMBL:AL031228 GO:GO:0035518 GO:GO:0035102
EMBL:AL645940 EMBL:AL844527 EMBL:CR759733 EMBL:CR759786
EMBL:AL713971 EMBL:CR847841 GO:GO:0001739 CTD:6015 eggNOG:NOG324386
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:QSASKTW
OrthoDB:EOG4SXND4 EMBL:Z14000 EMBL:BT007352 EMBL:AK289355
EMBL:CR547129 EMBL:BC002922 EMBL:BC051866 IPI:IPI00455876
IPI:IPI00641330 PIR:A47380 RefSeq:NP_002922.2 UniGene:Hs.631989
ProteinModelPortal:Q06587 SMR:Q06587 DIP:DIP-42043N IntAct:Q06587
MINT:MINT-1327105 STRING:Q06587 PhosphoSite:Q06587 DMDM:90110053
PaxDb:Q06587 PeptideAtlas:Q06587 PRIDE:Q06587 DNASU:6015
Ensembl:ENST00000374656 Ensembl:ENST00000383212
Ensembl:ENST00000415941 Ensembl:ENST00000427374
Ensembl:ENST00000430233 Ensembl:ENST00000436128 GeneID:6015
KEGG:hsa:6015 UCSC:uc003odk.3 GeneCards:GC06P033177 HGNC:HGNC:10018
HPA:HPA008701 MIM:602045 neXtProt:NX_Q06587 PharmGKB:PA34393
InParanoid:Q06587 GenomeRNAi:6015 NextBio:23467 ArrayExpress:Q06587
Bgee:Q06587 CleanEx:HS_RING1 Genevestigator:Q06587
GermOnline:ENSG00000204227 Uniprot:Q06587
Length = 406
Score = 151 (58.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 48/174 (27%), Positives = 75/174 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + I L +++LSS + ++
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SREEYEAHQDRVLIRLSRLHNQQALSSSIEEGLRMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNR 184
H +R + + + G G + E ED S S+PDS A R
Sbjct: 151 HRAQRVRRPIPGSDQTTTMSG-GEGEPGEGEGDGED-VSSDSAPDSAPGPAPKR 202
>UNIPROTKB|J3KT13 [details] [associations]
symbol:PCGF2 "Polycomb group ring finger 2, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
EMBL:CH471152 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 InterPro:IPR017907 UniGene:Hs.713595
UniGene:Hs.371617 HGNC:HGNC:12929 ProteinModelPortal:J3KT13
Ensembl:ENST00000579882 Ensembl:ENST00000585100 Uniprot:J3KT13
Length = 257
Score = 138 (53.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|Q2YDF9 [details] [associations]
symbol:PCGF1 "Polycomb group RING finger protein 1"
species:9913 "Bos taurus" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0031519 HSSP:P25916
HOVERGEN:HBG052826 eggNOG:NOG277991 HOGENOM:HOG000231946
EMBL:BC110242 IPI:IPI00687683 RefSeq:NP_001039912.2
UniGene:Bt.52040 ProteinModelPortal:Q2YDF9 GeneID:539040
KEGG:bta:539040 CTD:84759 InParanoid:Q2YDF9 KO:K11487
OrthoDB:EOG4894N6 NextBio:20877740 Uniprot:Q2YDF9
Length = 259
Score = 145 (56.1 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 35/93 (37%), Positives = 51/93 (54%)
Query: 1 MDTVRTTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEAD 60
MD +R V+VK + L + C LC +ATTI+ CLHTFC+ CI + L + +
Sbjct: 25 MDPLRNEEE--VRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYL--QTSK 80
Query: 61 CCPVCNIDLG-CLPVEKLRPDHNLQDIRAKIFP 92
CP+CNI + P+ + D +QDI K+ P
Sbjct: 81 YCPMCNIKIHETQPLLNHKLDRVMQDIVYKLVP 113
>ZFIN|ZDB-GENE-030131-224 [details] [associations]
symbol:bmi1a "B lymphoma Mo-MLV insertion region
1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IGI]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-030131-224 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0021549 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 EMBL:AB074153 EMBL:BC049423
IPI:IPI00503772 RefSeq:NP_919347.1 UniGene:Dr.76621 HSSP:P25916
ProteinModelPortal:Q8JIR0 SMR:Q8JIR0 STRING:Q8JIR0
Ensembl:ENSDART00000066765 Ensembl:ENSDART00000129554 GeneID:321505
KEGG:dre:321505 CTD:321505 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 KO:K11459 OrthoDB:EOG4KSPKG NextBio:20807406
ArrayExpress:Q8JIR0 Bgee:Q8JIR0 Uniprot:Q8JIR0
Length = 320
Score = 142 (55.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 KPLLNIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L KN RR++ Y PS + G N+ GE+ +
Sbjct: 86 LFKNEMKRRRDFYAEHPSVDAANGSNEDRGEVAD 119
>FB|FBgn0003330 [details] [associations]
symbol:Sce "Sex combs extra" species:7227 "Drosophila
melanogaster" [GO:0045498 "sex comb development" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IDA]
[GO:0006342 "chromatin silencing" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0008278 "cohesin complex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0030713 "ovarian follicle cell stalk
formation" evidence=IMP] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0035102 "PRC1
complex" evidence=TAS] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IMP] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Pfam:PF00097 Prosite:PS00518 EMBL:AE014297
GO:GO:0007126 GO:GO:0005730 GO:GO:0022008 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006342 InterPro:IPR017907 GO:GO:0030713
GO:GO:0045498 GO:GO:0035518 GO:GO:0035102 GO:GO:0030708
GO:GO:0008278 GO:GO:0007062 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 KO:K10695 EMBL:AJ001514 EMBL:AY058535
RefSeq:NP_477509.1 UniGene:Dm.4170 ProteinModelPortal:Q9VB08
SMR:Q9VB08 DIP:DIP-21764N IntAct:Q9VB08 MINT:MINT-860974
STRING:Q9VB08 PaxDb:Q9VB08 PRIDE:Q9VB08 EnsemblMetazoa:FBtr0085245
GeneID:43327 KEGG:dme:Dmel_CG5595 CTD:43327 FlyBase:FBgn0003330
InParanoid:Q9VB08 OMA:MELYFAP OrthoDB:EOG489332 PhylomeDB:Q9VB08
GenomeRNAi:43327 NextBio:833362 Bgee:Q9VB08 GermOnline:CG5595
Uniprot:Q9VB08
Length = 435
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/231 (23%), Positives = 92/231 (39%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L++ T CLH FC CI L +C P C L
Sbjct: 33 IAVSPRSLHSELMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 89
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LR D N + +KI+P R + +A + + +++L + + K+
Sbjct: 90 VSKRSLRADPNFDLLISKIYP-SREEYEAIQEKVMAKFNQTQSQQALVNSINEGIKLQSQ 148
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQESYKA 191
RTKG G G +++ P + +P ++ +NA N+ A
Sbjct: 149 NRPQRFRTKGGGGGGG---GGG---NGNGAANVAAPP-APGAPTAVGRNASNQMHVHDTA 201
Query: 192 EPSSEQGPNKVGEITEAKADLWTPL-NCLVEAANRTKSSKSNSQGPSLAKT 241
S N + T + + A+N SS +NS G S + T
Sbjct: 202 SNDSNSNTNSIDRENRDPGHSGTSAASAITSASNAAPSSSANS-GASTSAT 251
>UNIPROTKB|Q640D5 [details] [associations]
symbol:bmi1b "Polycomb complex protein BMI-1-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
KO:K11459 EMBL:BC082694 RefSeq:NP_001088007.1 UniGene:Xl.49729
ProteinModelPortal:Q640D5 SMR:Q640D5 GeneID:494698 KEGG:xla:494698
CTD:494698 Xenbase:XB-GENE-942193 Uniprot:Q640D5
Length = 323
Score = 137 (53.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/81 (35%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +A TI CLH+FC+ CI L E + CP+C++ +
Sbjct: 6 RIKITELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYL--ETSKYCPICDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLNIRADKTLQDIVYKLVP 84
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 16/75 (21%), Positives = 37/75 (49%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITEAKADLWTP---LNCLVEAANRTKSSK 230
L K RR++ Y A PS + G N+ GE+ + + T ++ +E ++ ++++
Sbjct: 86 LFKGEMKRRRDFYAAHPSVDAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDQNRANR 145
Query: 231 SNSQGPSLAKTDLHN 245
S+ +K + ++
Sbjct: 146 KGSKDKEKSKDEAND 160
Score = 40 (19.1 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 157 EDKKESSIEDHPMSSSSPDSLNKNAQNRRQESYKAEPSSEQGPNK 201
EDK+ I D + S S + ++N NR+ K E S ++ +K
Sbjct: 120 EDKR--IITDDEIISLSIEFFDQNRANRKGSKDK-EKSKDEANDK 161
>ZFIN|ZDB-GENE-060526-178 [details] [associations]
symbol:pcgf6 "polycomb group ring finger 6"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-060526-178 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
EMBL:AL928951 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OrthoDB:EOG41ZFBD EMBL:BC139554 IPI:IPI00611926
RefSeq:NP_001082838.1 UniGene:Dr.79341 SMR:A2ATX3 STRING:A2ATX3
Ensembl:ENSDART00000101582 GeneID:555238 KEGG:dre:555238
InParanoid:A2ATX3 OMA:PLMFDRS NextBio:20880870 Uniprot:A2ATX3
Length = 277
Score = 144 (55.7 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C LCN +ATTI+ CLHTFC+ CI + ++ CP C+I + P+ +RPD L
Sbjct: 60 CALCNGFFIDATTITECLHTFCKSCIVKHFF--YSNRCPNCSIVVHQTQPLYCIRPDRQL 117
Query: 84 QDIRAKIFPF 93
QDI K+ P+
Sbjct: 118 QDIVFKMVPY 127
>UNIPROTKB|Q7ZWM8 [details] [associations]
symbol:rnf2-b "E3 ubiquitin-protein ligase RING2-B"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 EMBL:BC046935 UniGene:Xl.76096
ProteinModelPortal:Q7ZWM8 SMR:Q7ZWM8 Xenbase:XB-GENE-6493980
Uniprot:Q7ZWM8
Length = 343
Score = 145 (56.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 34 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 90
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + L +++LSS + K+
Sbjct: 91 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLSRLHNQQALSSSIEEGLKMQAM 149
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKES-SIEDHPMSSSSPDSLNKNAQNRRQESY 189
H ++ + + G ED +S S +P S+ ++ ++R E
Sbjct: 150 HRAQRVRKHQHESDNTTFSGG-----EDNCDSRSHVSNPSVHSNQEAGPSRKRSRASEDS 204
Query: 190 KAEPS-SEQG 198
AEP S +G
Sbjct: 205 GAEPDLSHEG 214
>UNIPROTKB|Q5R9J5 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9601 "Pongo abelii" [GO:0000151 "ubiquitin ligase complex"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0031519 "PcG protein complex" evidence=ISS] [GO:0035102 "PRC1
complex" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005694 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0006351
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102 HOVERGEN:HBG079942
KO:K10695 CTD:6045 EMBL:CR859392 RefSeq:NP_001127433.1
UniGene:Pab.7792 ProteinModelPortal:Q5R9J5 SMR:Q5R9J5 PRIDE:Q5R9J5
GeneID:100174504 KEGG:pon:100174504 InParanoid:Q5R9J5
Uniprot:Q5R9J5
Length = 336
Score = 144 (55.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 45/201 (22%), Positives = 84/201 (41%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQESYKA 191
L +G +K G G ED +SS + + S+ ++ N + + +
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGL 205
Query: 192 EPSSEQGPNKVGEITEAKADL 212
EP + + + + +++
Sbjct: 206 EPDNNNAAMAIDPVMDGASEI 226
>UNIPROTKB|Q66J69 [details] [associations]
symbol:rnf2-a "E3 ubiquitin-protein ligase RING2-A"
species:8355 "Xenopus laevis" [GO:0031519 "PcG protein complex"
evidence=ISS] [GO:0035102 "PRC1 complex" evidence=ISS] [GO:0071339
"MLL1 complex" evidence=ISS] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0071339 GO:GO:0035102
HOVERGEN:HBG079942 KO:K10695 EMBL:BC081039 RefSeq:NP_001087647.1
UniGene:Xl.6549 ProteinModelPortal:Q66J69 SMR:Q66J69 GeneID:447471
KEGG:xla:447471 CTD:447471 Xenbase:XB-GENE-6253865 Uniprot:Q66J69
Length = 344
Score = 144 (55.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/190 (25%), Positives = 81/190 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKEC-PTCRKKL-- 91
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP-Q 130
+ LRPD N + +KI+P R + +A + L +++LSS + K+
Sbjct: 92 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQDRVLAKLNRLHNQQALSSSIEEGLKMQAM 150
Query: 131 HTGLTGKRTKGSTRKAAALRGCGFMLEDKKES-SIEDHPMSSSSPDSLNKNAQNRRQESY 189
H ++ + + G ED +S S +P S+ ++ ++R E
Sbjct: 151 HRAQRVRKHQHESDNTTFSGG-----EDNCDSRSHVSNPSVHSNQEAGPSRKRSRASEDS 205
Query: 190 KAEPS-SEQG 198
AEP S +G
Sbjct: 206 GAEPDLSHEG 215
>MGI|MGI:99161 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IGI] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001739 "sex chromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0016573 "histone acetylation" evidence=IGI] [GO:0016604
"nuclear body" evidence=IDA] [GO:0031519 "PcG protein complex"
evidence=ISO;IDA] [GO:0035102 "PRC1 complex" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IGI]
[GO:0048706 "embryonic skeletal system development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
MGI:MGI:99161 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001701 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 OMA:DRDEKKG EMBL:D90085 EMBL:AF483502
EMBL:AF483503 EMBL:BC016419 IPI:IPI00316639 PIR:A37991
RefSeq:NP_001156779.1 RefSeq:NP_001156780.1 RefSeq:NP_033571.1
UniGene:Mm.2418 ProteinModelPortal:P23798 SMR:P23798 DIP:DIP-37645N
IntAct:P23798 MINT:MINT-1172293 STRING:P23798 PhosphoSite:P23798
PRIDE:P23798 Ensembl:ENSMUST00000018681 Ensembl:ENSMUST00000103148
Ensembl:ENSMUST00000169807 Ensembl:ENSMUST00000179765 GeneID:22658
KEGG:mmu:22658 InParanoid:P23798 ChiTaRS:PCGF2 NextBio:303067
Bgee:P23798 CleanEx:MM_PCGF2 Genevestigator:P23798
GermOnline:ENSMUSG00000018537 Uniprot:P23798
Length = 342
Score = 138 (53.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>RGD|1305097 [details] [associations]
symbol:Pcgf2 "polycomb group ring finger 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=IEA;ISO] [GO:0001739 "sex
chromatin" evidence=IEA;ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0016573 "histone
acetylation" evidence=IEA;ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=IEA;ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0048706 "embryonic skeletal system development" evidence=ISO]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1305097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
EMBL:CH473948 GO:GO:0016604 InterPro:IPR017907 eggNOG:NOG304672
GeneTree:ENSGT00550000074463 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102 GO:GO:0001739
CTD:7703 KO:K11460 EMBL:BC167059 IPI:IPI00191064
RefSeq:NP_001099306.1 UniGene:Rn.11826 SMR:B2RZ82 STRING:B2RZ82
Ensembl:ENSRNOT00000017241 GeneID:287662 KEGG:rno:287662
UCSC:RGD:1305097 NextBio:626761 Genevestigator:B2RZ82
Uniprot:B2RZ82
Length = 342
Score = 138 (53.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|E1BMR4 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0035102 "PRC1 complex" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0043066
GO:GO:0009952 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
GO:GO:0016573 GO:GO:0003682 GO:GO:0016567 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0048704
GO:GO:0016604 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 GO:GO:0001739 CTD:7703 KO:K11460 OMA:DRDEKKG
UniGene:Bt.62403 EMBL:DAAA02049098 IPI:IPI00698887
RefSeq:NP_001137578.1 ProteinModelPortal:E1BMR4
Ensembl:ENSBTAT00000015331 GeneID:505147 KEGG:bta:505147
NextBio:20867002 Uniprot:E1BMR4
Length = 344
Score = 138 (53.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|J9NUE7 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03006484 EMBL:AAEX03006485
Ensembl:ENSCAFT00000048828 Uniprot:J9NUE7
Length = 344
Score = 138 (53.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|P35227 [details] [associations]
symbol:PCGF2 "Polycomb group RING finger protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0031519
"PcG protein complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0043066 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
EMBL:CH471152 GO:GO:0008270 GO:GO:0001701 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0016567
GO:GO:0000122 GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006449 GO:GO:0004842 GO:GO:0048704 GO:GO:0016604
InterPro:IPR017907 eggNOG:NOG304672 HOGENOM:HOG000231945
HOVERGEN:HBG052826 OrthoDB:EOG4KSPKG GO:GO:0035102
UniGene:Hs.713595 GO:GO:0001739 EMBL:D13969 EMBL:BX647429
EMBL:BC004858 EMBL:BC024255 IPI:IPI00017302 PIR:JN0717
RefSeq:NP_009075.1 UniGene:Hs.371617 ProteinModelPortal:P35227
SMR:P35227 DIP:DIP-41880N IntAct:P35227 MINT:MINT-158325
STRING:P35227 PhosphoSite:P35227 DMDM:462585 PRIDE:P35227
DNASU:7703 Ensembl:ENST00000360797 Ensembl:ENST00000580830
Ensembl:ENST00000581345 GeneID:7703 KEGG:hsa:7703 UCSC:uc002hqp.1
CTD:7703 GeneCards:GC17M036890 HGNC:HGNC:12929 HPA:HPA047732
MIM:600346 neXtProt:NX_P35227 PharmGKB:PA37516 InParanoid:P35227
KO:K11460 OMA:DRDEKKG GenomeRNAi:7703 NextBio:29858 Bgee:P35227
CleanEx:HS_PCGF2 Genevestigator:P35227 GermOnline:ENSG00000056661
Uniprot:P35227
Length = 344
Score = 138 (53.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|Q86SE9 [details] [associations]
symbol:PCGF5 "Polycomb group RING finger protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 EMBL:CH471066 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 HSSP:P25916 HOVERGEN:HBG052826
eggNOG:NOG277991 HOGENOM:HOG000231946 KO:K11489 OrthoDB:EOG4NKBW6
OMA:FYQSYPM CTD:84333 EMBL:AK303014 EMBL:AL832003 EMBL:AL832496
EMBL:BC007377 EMBL:BC051845 IPI:IPI00328390 IPI:IPI00449145
RefSeq:NP_001243478.1 RefSeq:NP_001244030.1 RefSeq:NP_115749.2
UniGene:Hs.500512 ProteinModelPortal:Q86SE9 SMR:Q86SE9
IntAct:Q86SE9 STRING:Q86SE9 PhosphoSite:Q86SE9 DMDM:74750353
PRIDE:Q86SE9 DNASU:84333 Ensembl:ENST00000336126
Ensembl:ENST00000371687 Ensembl:ENST00000543648 GeneID:84333
KEGG:hsa:84333 UCSC:uc001khh.3 GeneCards:GC10P092979
HGNC:HGNC:28264 HPA:HPA038349 neXtProt:NX_Q86SE9
PharmGKB:PA134929149 InParanoid:Q86SE9 PhylomeDB:Q86SE9
ChiTaRS:PCGF5 GenomeRNAi:84333 NextBio:74097 Bgee:Q86SE9
CleanEx:HS_PCGF5 Genevestigator:Q86SE9 Uniprot:Q86SE9
Length = 256
Score = 139 (54.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 6 TTARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
T +H+VK +TC +C L + TT++ CLHTFC+ CI + E+++ CP C
Sbjct: 3 TQRKHLVK----DFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRC 56
Query: 66 NIDLG-CLPVEKLRPDHNLQDIRAKIFPFKRRK 97
+ P+E LR D+ L++I K+ P R +
Sbjct: 57 GNQVHETNPLEMLRLDNTLEEIIFKLVPGLREQ 89
>UNIPROTKB|E2QY05 [details] [associations]
symbol:PCGF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 OMA:DRDEKKG EMBL:AAEX03006484
EMBL:AAEX03006485 Ensembl:ENSCAFT00000026210 Uniprot:E2QY05
Length = 348
Score = 138 (53.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 13 KVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-C 71
++K L + C LC +ATTI CLH+FC+ CI L E CP+C++ +
Sbjct: 6 RIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQVHKT 63
Query: 72 LPVEKLRPDHNLQDIRAKIFP 92
P+ +R D LQDI K+ P
Sbjct: 64 RPLLSIRSDKTLQDIVYKLVP 84
Score = 43 (20.2 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 177 LNKNAQNRRQESYKAEPSSE--QGPNKV-GEITE 207
L K+ RR++ Y A P +E G N+ GE+ E
Sbjct: 86 LFKDEMKRRRDFYAAYPLTEVPNGSNEDRGEVLE 119
>UNIPROTKB|E2RFW1 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071535 "RING-like zinc finger domain
binding" evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA]
[GO:0035102 "PRC1 complex" evidence=IEA] [GO:0016604 "nuclear body"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001739 "sex
chromatin" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 GO:GO:0001702
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 OMA:MELYFAP EMBL:AAEX03005159
Ensembl:ENSCAFT00000021407 Uniprot:E2RFW1
Length = 337
Score = 141 (54.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 44/177 (24%), Positives = 77/177 (43%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQ-- 151
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
+ + +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 152 -AMNSRLQRG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 200
>UNIPROTKB|E1BYN8 [details] [associations]
symbol:PCGF5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0031519 "PcG protein complex"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0005813
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0031519 GeneTree:ENSGT00550000074463
KO:K11489 OMA:FYQSYPM CTD:84333 EMBL:AADN02027727 IPI:IPI00603520
RefSeq:XP_421668.1 UniGene:Gga.14951 ProteinModelPortal:E1BYN8
Ensembl:ENSGALT00000010507 GeneID:423796 KEGG:gga:423796
NextBio:20826216 Uniprot:E1BYN8
Length = 256
Score = 136 (52.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+TC +C L + TT++ CLHTFC+ CI + E+++ CP C + P+E LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRCGNQVHETNPLEMLRLDN 73
Query: 82 NLQDIRAKIFPFKRRKVQAPEV 103
L++I K+ P R + E+
Sbjct: 74 TLEEIIFKLVPGLREQELQREI 95
>UNIPROTKB|E1BQF7 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0071339 "MLL1 complex"
evidence=IEA] [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0000278 GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP CTD:6045
EMBL:AADN02034211 IPI:IPI00572800 RefSeq:XP_422295.2
ProteinModelPortal:E1BQF7 Ensembl:ENSGALT00000007706 GeneID:424452
KEGG:gga:424452 NextBio:20826782 Uniprot:E1BQF7
Length = 336
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>RGD|1305491 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000151
"ubiquitin ligase complex" evidence=ISO;ISS] [GO:0000278 "mitotic
cell cycle" evidence=IEA;ISO] [GO:0001702 "gastrulation with mouth
forming second" evidence=IEA;ISO] [GO:0001739 "sex chromatin"
evidence=IEA;ISO] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISO;ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=IEA;ISO] [GO:0016574 "histone
ubiquitination" evidence=ISO] [GO:0016604 "nuclear body"
evidence=IEA;ISO] [GO:0031519 "PcG protein complex"
evidence=ISO;ISS] [GO:0035102 "PRC1 complex" evidence=ISO;ISS]
[GO:0035518 "histone H2A monoubiquitination" evidence=IEA;ISO]
[GO:0071339 "MLL1 complex" evidence=ISO;ISS] [GO:0071535 "RING-like
zinc finger domain binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 RGD:1305491 Prosite:PS00518
GO:GO:0005694 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 CTD:6045
OrthoDB:EOG4R7VB1 EMBL:BC098941 IPI:IPI00950204
RefSeq:NP_001020838.1 UniGene:Rn.19719 ProteinModelPortal:Q4KLY4
SMR:Q4KLY4 STRING:Q4KLY4 PhosphoSite:Q4KLY4
Ensembl:ENSRNOT00000065944 GeneID:304850 KEGG:rno:304850
UCSC:RGD:1305491 InParanoid:Q4KLY4 NextBio:653721
ArrayExpress:Q4KLY4 Genevestigator:Q4KLY4
GermOnline:ENSRNOG00000002454 Uniprot:Q4KLY4
Length = 308
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>UNIPROTKB|A6QLQ0 [details] [associations]
symbol:RNF2 "RNF2 protein" species:9913 "Bos taurus"
[GO:0071535 "RING-like zinc finger domain binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IEA] [GO:0035102 "PRC1 complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0009948
"anterior/posterior axis specification" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0000122
GO:GO:0001702 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0009948 GO:GO:0016604 GO:GO:0000151 InterPro:IPR017907
GO:GO:0071339 GO:GO:0000278 GO:GO:0035518 GO:GO:0035102
GO:GO:0001739 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP
CTD:6045 OrthoDB:EOG4R7VB1 EMBL:DAAA02043606 EMBL:BC148044
IPI:IPI00867396 RefSeq:NP_001094673.1 UniGene:Bt.102990 SMR:A6QLQ0
STRING:A6QLQ0 Ensembl:ENSBTAT00000000025 GeneID:540090
KEGG:bta:540090 InParanoid:A6QLQ0 NextBio:20878411 Uniprot:A6QLQ0
Length = 336
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>UNIPROTKB|Q99496 [details] [associations]
symbol:RNF2 "E3 ubiquitin-protein ligase RING2"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0001702
"gastrulation with mouth forming second" evidence=IEA] [GO:0001739
"sex chromatin" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0009948 "anterior/posterior axis specification"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071339 "MLL1 complex"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031519 "PcG
protein complex" evidence=IDA] [GO:0035518 "histone H2A
monoubiquitination" evidence=IDA] [GO:0035102 "PRC1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0071535
"RING-like zinc finger domain binding" evidence=IPI] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 EMBL:CH471067 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009948 GO:GO:0016604 GO:GO:0000151
InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278 CleanEx:HS_BAP1
GO:GO:0035518 GO:GO:0035102 PDB:2H0D PDB:3RPG PDBsum:2H0D
PDBsum:3RPG PDB:3GS2 PDBsum:3GS2 GO:GO:0001739 EMBL:AL109865
eggNOG:NOG324386 HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695
OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1 EMBL:Y10571 EMBL:AF141327
EMBL:AK314793 EMBL:BC012583 IPI:IPI00026993 RefSeq:NP_009143.1
UniGene:Hs.591490 PDB:3H8H PDB:3IXS PDBsum:3H8H PDBsum:3IXS
ProteinModelPortal:Q99496 SMR:Q99496 DIP:DIP-40034N IntAct:Q99496
MINT:MINT-1420125 STRING:Q99496 PhosphoSite:Q99496 DMDM:62901044
PaxDb:Q99496 PRIDE:Q99496 DNASU:6045 Ensembl:ENST00000367510
Ensembl:ENST00000453650 GeneID:6045 KEGG:hsa:6045 UCSC:uc001grc.1
GeneCards:GC01P185014 HGNC:HGNC:10061 HPA:HPA026803 MIM:608985
neXtProt:NX_Q99496 PharmGKB:PA34426 InParanoid:Q99496
PhylomeDB:Q99496 EvolutionaryTrace:Q99496 GenomeRNAi:6045
NextBio:23553 ArrayExpress:Q99496 Bgee:Q99496 CleanEx:HS_RNF2
Genevestigator:Q99496 GermOnline:ENSG00000121481 Uniprot:Q99496
Length = 336
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>MGI|MGI:1101759 [details] [associations]
symbol:Rnf2 "ring finger protein 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000151 "ubiquitin
ligase complex" evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0009948 "anterior/posterior axis
specification" evidence=IMP] [GO:0016574 "histone ubiquitination"
evidence=IGI;IDA] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;IDA] [GO:0035102 "PRC1 complex"
evidence=ISO] [GO:0035518 "histone H2A monoubiquitination"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISO] [GO:0071535 "RING-like
zinc finger domain binding" evidence=ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1101759
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0031519 GO:GO:0035102 GO:GO:0016574 PDB:2CKL
PDBsum:2CKL GO:GO:0001739 eggNOG:NOG324386
GeneTree:ENSGT00390000016977 HOGENOM:HOG000273917
HOVERGEN:HBG079942 KO:K10695 OMA:MELYFAP CTD:6045 OrthoDB:EOG4R7VB1
EMBL:Y12880 EMBL:Y12783 EMBL:AK145767 EMBL:AK012358 EMBL:AK013124
EMBL:AK030319 EMBL:AK090066 EMBL:CT010297 EMBL:BC020122
IPI:IPI00133880 RefSeq:NP_035407.1 UniGene:Mm.474038
ProteinModelPortal:Q9CQJ4 SMR:Q9CQJ4 IntAct:Q9CQJ4
MINT:MINT-1341250 STRING:Q9CQJ4 PhosphoSite:Q9CQJ4 PaxDb:Q9CQJ4
PRIDE:Q9CQJ4 Ensembl:ENSMUST00000076110 GeneID:19821 KEGG:mmu:19821
UCSC:uc007cyx.1 InParanoid:Q9CQJ4 EvolutionaryTrace:Q9CQJ4
NextBio:297285 Bgee:Q9CQJ4 CleanEx:MM_RNF2 Genevestigator:Q9CQJ4
GermOnline:ENSMUSG00000026484 Uniprot:Q9CQJ4
Length = 336
Score = 136 (52.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/177 (25%), Positives = 76/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>RGD|1306904 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031519 "PcG
protein complex" evidence=ISO;ISS] [GO:0035102 "PRC1 complex"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
RGD:1306904 Prosite:PS00518 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:BC083820
IPI:IPI00361558 RefSeq:NP_001013172.1 UniGene:Rn.16897
ProteinModelPortal:Q5XI70 SMR:Q5XI70 PRIDE:Q5XI70
Ensembl:ENSRNOT00000027450 GeneID:309457 KEGG:rno:309457
UCSC:RGD:1306904 InParanoid:Q5XI70 NextBio:660834
Genevestigator:Q5XI70 GermOnline:ENSRNOG00000020250 Uniprot:Q5XI70
Length = 351
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 45/125 (36%), Positives = 59/125 (47%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 192
Query: 84 QDIRAKIFPF--KRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQHTGLTGKRTKG 141
QDI K+ +R K Q + KER L V P VPQ +KG
Sbjct: 193 QDIVYKLVVNLEEREKKQMHDFY---------KERGLE---VPKPAVPQPV----PASKG 236
Query: 142 STRKA 146
T+KA
Sbjct: 237 RTKKA 241
>RGD|1562871 [details] [associations]
symbol:RGD1562871 "similar to BMI1-like protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 RGD:1562871 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 EMBL:CH473969
IPI:IPI00361980 RefSeq:NP_001100405.1 UniGene:Rn.218687
Ensembl:ENSRNOT00000050807 GeneID:302366 KEGG:rno:302366
UCSC:RGD:1562871 CTD:302366 OrthoDB:EOG4XSKRX NextBio:649488
Uniprot:D4AE11
Length = 232
Score = 131 (51.2 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 28/69 (40%), Positives = 40/69 (57%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
++C +C L +A TI+ CLHTFC+ CI + E ++ CP CNI + P LR D
Sbjct: 121 ISCSICKGYLIDAATITECLHTFCKSCIVKHF--EHSNRCPKCNIIVHEAKPHNNLRMDP 178
Query: 82 NLQDIRAKI 90
LQ+I K+
Sbjct: 179 QLQNIVYKL 187
>ZFIN|ZDB-GENE-030131-5243 [details] [associations]
symbol:rnf2 "ring finger protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0016604 "nuclear body"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0000278
"mitotic cell cycle" evidence=ISS] [GO:0035102 "PRC1 complex"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5243 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GO:GO:0033339 GO:GO:0071339
GO:GO:0035102 eggNOG:NOG324386 GeneTree:ENSGT00390000016977
HOGENOM:HOG000273917 HOVERGEN:HBG079942 KO:K10695 EMBL:AY576996
EMBL:BC044472 EMBL:AF196346 IPI:IPI00499481 RefSeq:NP_571288.1
UniGene:Dr.31086 ProteinModelPortal:Q803I4 SMR:Q803I4 STRING:Q803I4
Ensembl:ENSDART00000017034 GeneID:327035 KEGG:dre:327035 CTD:6045
InParanoid:Q803I4 OrthoDB:EOG4R7VB1 NextBio:20809851 Bgee:Q803I4
Uniprot:Q803I4
Length = 336
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++LS + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAM 153
Query: 132 TGLT-GKR 138
L GK+
Sbjct: 154 NRLQRGKK 161
>UNIPROTKB|E1BJL2 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 CTD:84108 KO:K11470 OMA:IGANEDT
EMBL:DAAA02059034 EMBL:DAAA02059035 IPI:IPI00710365
RefSeq:NP_001192549.1 UniGene:Bt.42279 ProteinModelPortal:E1BJL2
Ensembl:ENSBTAT00000013026 GeneID:507739 KEGG:bta:507739
NextBio:20868204 Uniprot:E1BJL2
Length = 351
Score = 133 (51.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 43/119 (36%), Positives = 56/119 (47%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 135 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 192
Query: 84 QDIRAKIFPF--KRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQHTGLTGKRTK 140
QDI K+ +R K Q + KER L V P VPQ + RTK
Sbjct: 193 QDIVYKLVINLEEREKKQMHDFY---------KERGLE---VPKPAVPQPVPSSKGRTK 239
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 111 (44.1 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 24 TCPLCNSLLREATTISLCLHTFCRKCIYEKLSD-EEADCCPVCNIDLGCLPVEKLRPDHN 82
+CP+C L++ TI+ C H FCR C+ D ++ CPVC C P + R +
Sbjct: 15 SCPICLEYLKDPVTIN-CGHNFCRSCLSVSWKDLDDTFPCPVCRF---CFPYKSFRRNPQ 70
Query: 83 LQDIR--AKIFPFKRRK 97
L+++ AK +R K
Sbjct: 71 LRNLTEIAKQLQIRRSK 87
>UNIPROTKB|F1S3N6 [details] [associations]
symbol:RNF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071535 "RING-like zinc finger domain binding"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0035518
"histone H2A monoubiquitination" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA]
[GO:0009948 "anterior/posterior axis specification" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] [GO:0001702 "gastrulation with mouth forming second"
evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0000122 GO:GO:0001702 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0009948 GO:GO:0016604
GO:GO:0000151 InterPro:IPR017907 GO:GO:0071339 GO:GO:0000278
GO:GO:0035518 GO:GO:0035102 GO:GO:0001739
GeneTree:ENSGT00390000016977 KO:K10695 OMA:MELYFAP EMBL:CU915492
RefSeq:XP_003130427.1 Ensembl:ENSSSCT00000016959 GeneID:100517846
KEGG:ssc:100517846 Uniprot:F1S3N6
Length = 336
Score = 131 (51.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 44/177 (24%), Positives = 75/177 (42%)
Query: 12 VKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGC 71
+ V +L + + CP+C +L+ T CLH FC CI L +C P C L
Sbjct: 38 IVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKEC-PTCRKKL-- 94
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
+ LRPD N + +KI+P R + +A + + +++L + K+
Sbjct: 95 VSKRSLRPDPNFDALISKIYP-SRDEYEAHQERVLARINKHNNQQALCHSIEEGLKIQAM 153
Query: 132 TGLTGKRTKGSTRKAAALRGCGFMLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQES 188
L +G +K G G ED +SS H ++S+ + N+R ++
Sbjct: 154 NRLQ----RG--KKQQIENGSG--AEDNGDSS---HCSNASTHSNQEAGPSNKRTKT 199
>UNIPROTKB|E2RE60 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035102 "PRC1
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0045892 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0035102 CTD:84108 KO:K11470 EMBL:AAEX03015497
EMBL:AAEX03015496 RefSeq:XP_852021.1 ProteinModelPortal:E2RE60
Ensembl:ENSCAFT00000016498 GeneID:609633 KEGG:cfa:609633
NextBio:20895222 Uniprot:E2RE60
Length = 349
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 133 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 190
Query: 84 QDIRAKI 90
QDI K+
Sbjct: 191 QDIVYKL 197
>UNIPROTKB|Q9BYE7 [details] [associations]
symbol:PCGF6 "Polycomb group RING finger protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0031519 "PcG protein complex" evidence=IDA;TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0035102 "PRC1 complex" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
EMBL:AB047006 Pfam:PF00097 Prosite:PS00518 GO:GO:0045892
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL591408
InterPro:IPR017907 HOVERGEN:HBG052826 GO:GO:0035102
HOGENOM:HOG000231946 EMBL:AK027885 EMBL:AK290679 EMBL:BC007602
EMBL:BC010235 IPI:IPI00030334 IPI:IPI00063571 RefSeq:NP_001011663.1
RefSeq:NP_115530.2 UniGene:Hs.741474 PDB:2DJB PDBsum:2DJB
ProteinModelPortal:Q9BYE7 SMR:Q9BYE7 DIP:DIP-50946N IntAct:Q9BYE7
STRING:Q9BYE7 PhosphoSite:Q9BYE7 DMDM:116242703 PRIDE:Q9BYE7
DNASU:84108 Ensembl:ENST00000337211 Ensembl:ENST00000369847
GeneID:84108 KEGG:hsa:84108 UCSC:uc001kwt.3 UCSC:uc001kwu.3
CTD:84108 GeneCards:GC10M105053 H-InvDB:HIX0014963 HGNC:HGNC:21156
MIM:607816 neXtProt:NX_Q9BYE7 PharmGKB:PA134887110 eggNOG:NOG286828
InParanoid:Q9BYE7 KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD
PhylomeDB:Q9BYE7 EvolutionaryTrace:Q9BYE7 GenomeRNAi:84108
NextBio:73375 Bgee:Q9BYE7 CleanEx:HS_PCGF6 Genevestigator:Q9BYE7
GermOnline:ENSG00000156374 Uniprot:Q9BYE7
Length = 350
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 134 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 191
Query: 84 QDIRAKI 90
QDI K+
Sbjct: 192 QDIVYKL 198
>MGI|MGI:1918291 [details] [associations]
symbol:Pcgf6 "polycomb group ring finger 6" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISA] [GO:0031519 "PcG protein complex" evidence=ISO]
[GO:0035102 "PRC1 complex" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1918291
Pfam:PF00097 Prosite:PS00518 GO:GO:0019904 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 HOVERGEN:HBG052826
GO:GO:0035102 HOGENOM:HOG000231946 CTD:84108 eggNOG:NOG286828
KO:K11470 OMA:IGANEDT OrthoDB:EOG41ZFBD EMBL:AB047007 EMBL:BC016195
EMBL:BC089460 IPI:IPI00118541 RefSeq:NP_081930.1 UniGene:Mm.35413
ProteinModelPortal:Q99NA9 SMR:Q99NA9 IntAct:Q99NA9 STRING:Q99NA9
PhosphoSite:Q99NA9 PRIDE:Q99NA9 Ensembl:ENSMUST00000026032
GeneID:71041 KEGG:mmu:71041 UCSC:uc008hul.1 InParanoid:Q99NA9
NextBio:332887 Bgee:Q99NA9 CleanEx:MM_PCGF6 Genevestigator:Q99NA9
GermOnline:ENSMUSG00000025050 Uniprot:Q99NA9
Length = 353
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 137 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 194
Query: 84 QDIRAKI 90
QDI K+
Sbjct: 195 QDIVYKL 201
>UNIPROTKB|J9P0C4 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00550000074463 EMBL:AAEX03015497 EMBL:AAEX03015496
Ensembl:ENSCAFT00000044220 OMA:WAGRSHY Uniprot:J9P0C4
Length = 383
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C L +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 133 CSICKGYLIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 190
Query: 84 QDIRAKI 90
QDI K+
Sbjct: 191 QDIVYKL 197
>UNIPROTKB|F1NDM6 [details] [associations]
symbol:PCGF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0035102
"PRC1 complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0045892 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00550000074463 GO:GO:0035102
OMA:IGANEDT EMBL:AADN02030828 EMBL:AADN02030829 IPI:IPI00811000
Ensembl:ENSGALT00000013395 Uniprot:F1NDM6
Length = 293
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDHNL 83
C +C +ATTI+ CLHTFC+ CI ++ CP CNI + P+ +R D L
Sbjct: 77 CSICKGYFIDATTITECLHTFCKSCIVRHFY--YSNRCPKCNIVVHQTQPLYNIRLDRQL 134
Query: 84 QDIRAKI 90
QDI K+
Sbjct: 135 QDIVYKL 141
>MGI|MGI:1921615 [details] [associations]
symbol:Lonrf3 "LON peptidase N-terminal domain and ring
finger 3" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 MGI:MGI:1921615 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802
HOGENOM:HOG000060199 HOVERGEN:HBG081924 CTD:79836 EMBL:AK016522
EMBL:AL450395 EMBL:BC120688 EMBL:BC120690 IPI:IPI00137246
RefSeq:NP_083170.1 UniGene:Mm.327654 HSSP:Q13049
ProteinModelPortal:Q9D4H7 SMR:Q9D4H7 PhosphoSite:Q9D4H7
PRIDE:Q9D4H7 Ensembl:ENSMUST00000016383 GeneID:74365 KEGG:mmu:74365
UCSC:uc009sxm.1 GeneTree:ENSGT00440000033329 InParanoid:Q9D4H7
OrthoDB:EOG4RXXZM NextBio:340559 Bgee:Q9D4H7 CleanEx:MM_LONRF3
Genevestigator:Q9D4H7 Uniprot:Q9D4H7
Length = 753
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 38/112 (33%), Positives = 52/112 (46%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC-NIDLGCLPVEKLRPDH 81
+ C LC L E T C HTFC KC+ E+ D A C P+C ++ L CLP K +
Sbjct: 459 LECSLCMRLFYEPVTTP-CGHTFCLKCL-ERCLDHNAKC-PLCKDVLLQCLPSRKYSKNV 515
Query: 82 NLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
L+++ A P FK RK E M +S K + ++ T P H
Sbjct: 516 ILEELIATFLPEEFKERKRLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLH 567
>TAIR|locus:2133109 [details] [associations]
symbol:BRCA1 "breast cancer susceptibility1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0006302 "double-strand break
repair" evidence=RCA] InterPro:IPR001841 InterPro:IPR011364
PIRSF:PIRSF001734 PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357
Pfam:PF00533 Prosite:PS00518 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
KO:K10683 HSSP:P28990 EMBL:AY081328 EMBL:AF515728 EMBL:BT010547
IPI:IPI00526043 RefSeq:NP_193839.4 UniGene:At.32665
ProteinModelPortal:Q8RXD4 SMR:Q8RXD4 MINT:MINT-3289893
STRING:Q8RXD4 PaxDb:Q8RXD4 PRIDE:Q8RXD4 EnsemblPlants:AT4G21070.1
GeneID:827854 KEGG:ath:AT4G21070 TAIR:At4g21070 eggNOG:NOG274496
HOGENOM:HOG000084100 InParanoid:Q8RXD4 OMA:EWAPNVY PhylomeDB:Q8RXD4
ProtClustDB:CLSN2681611 Genevestigator:Q8RXD4 PANTHER:PTHR13763
Uniprot:Q8RXD4
Length = 941
Score = 98 (39.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 10 HVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNI 67
H+ ++ RE + CP+C SL A ++S C H FC CI + + + CPVC I
Sbjct: 6 HLERMGRE-----LKCPICLSLYNSAVSLS-CNHVFCNACIVKSMKMDAT--CPVCKI 55
Score = 81 (33.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 35/132 (26%), Positives = 62/132 (46%)
Query: 88 AKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQHTGLTGK---RTKGSTR 144
+++F + +R +PE++PS P K K + ++ K+P+ + K R GS R
Sbjct: 265 SEMFEWTQRPC-SPEILPS---PVKAKVLGRDEIDLTQKKLPKVKVASSKCKNRKAGSAR 320
Query: 145 KAAALRGCGFMLEDKKESS----IEDHPMSSSSPDSLNKNAQNRRQESYKAEPSSEQGPN 200
A R G ED ESS I + S + ++ +N N E+ KA+ ++ +
Sbjct: 321 NTVARRSIGVSQEDNMESSAAATISEQQDSRGTSGTIIRNDVNT-DENVKAKRATR---S 376
Query: 201 KVGEITEAKADL 212
K + T ++DL
Sbjct: 377 KA-QSTRVQSDL 387
>UNIPROTKB|E1BSU9 [details] [associations]
symbol:LOC416147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GeneTree:ENSGT00700000104271 EMBL:AADN02074984
IPI:IPI00590049 Ensembl:ENSGALT00000001837 OMA:PIEERRC
Uniprot:E1BSU9
Length = 274
Score = 118 (46.6 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 8 ARHVVKVKRETLEACMTCPLCNSLLREATTISLCL-HTFCRKCIYEKLSDEE----ADCC 62
A+ V+ +LE +TC +C SL + +SLC H+FC++C+ + LS+++ + C
Sbjct: 4 AKEEVRAS-SSLEDELTCSICLSLYKNP--VSLCCGHSFCKQCVQKVLSNQQQAKASYSC 60
Query: 63 PVCNIDLGCLPVEKLRPDHNLQDI 86
P+C +DLG P+ +L+ + +L I
Sbjct: 61 PLCRVDLG--PILELQNNFHLCSI 82
Score = 43 (20.2 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 136 GKRTKG-STRKAAALRGCGFMLEDKKESSIE 165
GK+ KG +T+K A+ C F L DK + +++
Sbjct: 91 GKKDKGFATKKEEAVP-CDFCL-DKPQPAVK 119
>UNIPROTKB|Q5D7H8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:230833 "Callicebus donacophilus" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0002218 "activation of
innate immune response" evidence=ISS] [GO:0002221 "pattern
recognition receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843519
ProteinModelPortal:Q5D7H8 SMR:Q5D7H8 Uniprot:Q5D7H8
Length = 494
Score = 126 (49.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 8 ARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIY----EKLSDEEADCCP 63
+R +V +K E +TCP+C LL E ++ C H+FC+ CI E + CP
Sbjct: 3 SRILVNIKEE-----VTCPICLELLTEPLSLD-CGHSFCQACITANHKESTLHQGERSCP 56
Query: 64 VCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSL 118
+C I P E LRP+ +L +I ++ R V +PE + L A+ E+ L
Sbjct: 57 LCRISY---PSENLRPNRHLANIVERL----REVVLSPEEGQKVDLCARHGEKLL 104
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 102 (41.0 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCN 66
CP+C ++ EA ++ C H+FC KCI++ L D CP CN
Sbjct: 41 CPICFDMIEEAY-MTKCGHSFCYKCIHQSLEDNNR--CPKCN 79
>ZFIN|ZDB-GENE-030131-3522 [details] [associations]
symbol:chfr "checkpoint with forkhead and ring
finger domains, E3 ubiquitin protein ligase" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0016605 "PML body" evidence=ISS] [GO:0019941
"modification-dependent protein catabolic process" evidence=ISS]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000253
InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-3522 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0007093 GO:GO:0019941 InterPro:IPR017907
EMBL:CT573109 EMBL:BC153311 IPI:IPI00854275 IPI:IPI00944855
RefSeq:NP_001093485.1 UniGene:Dr.148986 ProteinModelPortal:A5WW08
SMR:A5WW08 STRING:A5WW08 Ensembl:ENSDART00000110783
Ensembl:ENSDART00000115227 GeneID:564271 KEGG:dre:564271 CTD:55743
eggNOG:NOG253207 GeneTree:ENSGT00400000022306 HOGENOM:HOG000290186
KO:K10644 OMA:LYWGCAR OrthoDB:EOG43FGWJ NextBio:20885304
Bgee:A5WW08 Uniprot:A5WW08
Length = 637
Score = 119 (46.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 17 ETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLPVEK 76
+ +E +TC +C LL + ++ C+HTFC C Y E + CP C C PVE+
Sbjct: 269 DKMEESLTCIICQDLLYDCISVQPCMHTFCAAC-YSGWM-ERSSFCPTCR----C-PVER 321
Query: 77 LRPDHNLQDI 86
+R +H L ++
Sbjct: 322 IRKNHILNNL 331
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 155 MLEDKKESSIEDHPMSSSSPDSLNKNAQNRRQESYKAEP--SSEQGPNKVGEITEAKADL 212
ML+ K E S D SS D L + + N S ++P Q P E++ A L
Sbjct: 362 MLQPKVERSFSDEEASS---DYLFELSDNDSDISDMSQPYMMCRQCPGYRKELSSA---L 415
Query: 213 WTPLNCLVEAANRTKSSKSNSQGPS 237
W C E+A +K+ GPS
Sbjct: 416 WI---C--ESAQSESLAKTAGDGPS 435
>UNIPROTKB|C9JWN8 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HOGENOM:HOG000234134 HGNC:HGNC:16276 ChiTaRS:TRIM5
EMBL:AC109341 IPI:IPI00749246 ProteinModelPortal:C9JWN8 SMR:C9JWN8
STRING:C9JWN8 Ensembl:ENST00000419850 ArrayExpress:C9JWN8
Bgee:C9JWN8 Uniprot:C9JWN8
Length = 72
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YEK-LSDEEADCCPVCN 66
+V VK E +TCP+C LL + ++ C H+FC+ C+ ++K + D+ CPVC
Sbjct: 6 LVNVKEE-----VTCPICLELLTQPLSLD-CGHSFCQACLTANHKKSMLDKGESSCPVCR 59
Query: 67 IDLGCLPVEKLRPDHN 82
I P E +RP+ +
Sbjct: 60 ISYQ--P-ENIRPNRH 72
>WB|WBGene00008684 [details] [associations]
symbol:mig-32 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
[GO:0030334 "regulation of cell migration" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0033522 "histone H2A
ubiquitination" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0048841 "regulation of axon
extension involved in axon guidance" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IGI]
InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089 SMART:SM00184
Pfam:PF00097 Prosite:PS00518 GO:GO:0009792 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0000003 GO:GO:0030334
GO:GO:0046662 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0045138
GO:GO:0040027 InterPro:IPR017907 GeneTree:ENSGT00550000074463
GO:GO:0048841 eggNOG:NOG277991 GO:GO:0033522 EMBL:Z68297
GeneID:178150 KEGG:cel:CELE_F11A10.3 CTD:178150
RefSeq:NP_001255620.1 ProteinModelPortal:Q19336 SMR:Q19336
IntAct:Q19336 STRING:Q19336 PaxDb:Q19336 EnsemblMetazoa:F11A10.3a
UCSC:F11A10.3 WormBase:F11A10.3a HOGENOM:HOG000017899
InParanoid:Q19336 OMA:TMNTLKK NextBio:899926 ArrayExpress:Q19336
Uniprot:Q19336
Length = 549
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 25/85 (29%), Positives = 41/85 (48%)
Query: 9 RHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNID 68
R VK E L +TC +C+ + +ATTI C+HTFC+ C+ + + CP C
Sbjct: 313 RATVKYNMEVLNPFITCGICDGYIVDATTIIDCMHTFCKSCLLTYFESDN-NTCPTCGTF 371
Query: 69 L-GCLPVEKLRPDHNLQDIRAKIFP 92
+ G P + D + ++ + P
Sbjct: 372 IHGSHPTHYVTYDRAVNELVNQFVP 396
>UNIPROTKB|E1BBP0 [details] [associations]
symbol:CHFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20
SUPFAM:SSF49879 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 InterPro:IPR017907 GO:GO:0000278
CTD:55743 GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
EMBL:DAAA02044944 IPI:IPI00692825 RefSeq:NP_001192403.1
UniGene:Bt.45882 ProteinModelPortal:E1BBP0
Ensembl:ENSBTAT00000018544 GeneID:614816 KEGG:bta:614816
NextBio:20899304 Uniprot:E1BBP0
Length = 663
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 14 VKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLP 73
+K + +E +TC +C LL + ++ C+HTFC C Y + A CP C C P
Sbjct: 293 MKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWMERSA-LCPTCR----C-P 345
Query: 74 VEKLRPDHNLQD-IRAKIF--PFKRR 96
VE++ +H L + + A + P KRR
Sbjct: 346 VERICKNHILNNLVEAYLLQHPDKRR 371
>MGI|MGI:98178 [details] [associations]
symbol:Trim30a "tripartite motif-containing 30A" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032715 "negative regulation of
interleukin-6 production" evidence=IMP] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=IMP]
[GO:0034122 "negative regulation of toll-like receptor signaling
pathway" evidence=IMP] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IMP] [GO:1900226 "negative regulation of NLRP3
inflammasome complex assembly" evidence=IMP] [GO:2000378 "negative
regulation of reactive oxygen species metabolic process"
evidence=IMP] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
MGI:MGI:98178 Pfam:PF00097 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0032720 GO:GO:0032715 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:CH466531 GO:GO:0045732 GO:GO:2000378 InterPro:IPR017907
GO:GO:0034122 GO:GO:0051865 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 PRINTS:PR01407 GeneTree:ENSGT00690000101646
HOVERGEN:HBG001357 HOGENOM:HOG000234134 eggNOG:NOG310455
EMBL:J03776 EMBL:AF220014 EMBL:AF220015 EMBL:AF220016 EMBL:AK134144
EMBL:AK137506 EMBL:AC122400 EMBL:AC142110 EMBL:BC005447
IPI:IPI00466858 IPI:IPI00875139 PIR:A30891 RefSeq:NP_033125.2
UniGene:Mm.295578 PDB:2ECW PDBsum:2ECW ProteinModelPortal:P15533
SMR:P15533 STRING:P15533 PRIDE:P15533 Ensembl:ENSMUST00000076922
GeneID:20128 KEGG:mmu:20128 CTD:20128 InParanoid:P15533 OMA:AICLLCE
OrthoDB:EOG4229JJ EvolutionaryTrace:P15533 NextBio:297627
Bgee:P15533 CleanEx:MM_TRIM30 Genevestigator:P15533
GermOnline:ENSMUSG00000030921 GO:GO:1900226 Uniprot:P15533
Length = 496
Score = 120 (47.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 17 ETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YE--KLSDEEADCCPVCNIDLGC 71
E ++ +TCP+C LL+E + C H+FCR CI YE + +D + +C PVC +
Sbjct: 7 EMIKEEVTCPICLELLKEPVSAD-CNHSFCRACITLNYESNRNTDGKGNC-PVCRVPY-- 62
Query: 72 LPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKER 116
P LRP+ ++ +I ++ FK PE +++ A+ E+
Sbjct: 63 -PFGNLRPNLHVANIVERLKGFK----SIPEEEQKVNICAQHGEK 102
Score = 41 (19.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 119 SSLVVSTPKVPQHTGLTGKRTKGSTRKAAALRGCGFML 156
S LV+S P P G+ R K T + CG ++
Sbjct: 428 SILVISLPDRPSRVGVFLDR-KAGTLSFYDVSNCGALI 464
>UNIPROTKB|F5GWT6 [details] [associations]
symbol:CHFR "E3 ubiquitin-protein ligase CHFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC127070 HGNC:HGNC:20455 ChiTaRS:CHFR
IPI:IPI00973335 ProteinModelPortal:F5GWT6 SMR:F5GWT6 PRIDE:F5GWT6
Ensembl:ENST00000541837 ArrayExpress:F5GWT6 Bgee:F5GWT6
Uniprot:F5GWT6
Length = 349
Score = 117 (46.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 15 KRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLPV 74
K + +E +TC +C LL + ++ C+HTFC C Y E + CP C C PV
Sbjct: 94 KPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWM-ERSSLCPTCR----C-PV 146
Query: 75 EKLRPDHNLQDI 86
E++ +H L ++
Sbjct: 147 ERICKNHILNNL 158
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 155 MLEDKKESSIEDHPMSSSSP------DSLNKNAQNRRQESYKAEPSSEQGPNK----VGE 204
+L + E+ + HP S S D+ NK Q+ Q + S E+G ++ + +
Sbjct: 154 ILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 213
Query: 205 ITEAKADLWTP 215
+ +D+ P
Sbjct: 214 VDSESSDISQP 224
>UNIPROTKB|J3KSI2 [details] [associations]
symbol:RNF138 "E3 ubiquitin-protein ligase RNF138"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HGNC:HGNC:17765 EMBL:AC011825 Ensembl:ENST00000578107
Uniprot:J3KSI2
Length = 108
Score = 96 (38.9 bits), Expect = 0.00032, P = 0.00032
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 25 CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVC 65
CP+C +L+ + C H FCRKC + + A C P+C
Sbjct: 18 CPVCQEVLKTPVRTTACQHVFCRKCFLTAMRESGAHC-PLC 57
>UNIPROTKB|G3X6C1 [details] [associations]
symbol:LONRF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR003111 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089
PROSITE:PS50293 SMART:SM00028 SMART:SM00184 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR013105 Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 CTD:79836 OMA:VKLSALM
GeneTree:ENSGT00440000033329 EMBL:DAAA02067124
RefSeq:NP_001178063.1 UniGene:Bt.92361 ProteinModelPortal:G3X6C1
Ensembl:ENSBTAT00000003384 GeneID:508189 KEGG:bta:508189
NextBio:20868400 Uniprot:G3X6C1
Length = 759
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 39/128 (30%), Positives = 56/128 (43%)
Query: 8 ARHVVKVKRETLEAC-MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCN 66
AR + V + +A + C LC L E T C HTFC KC+ E+ D A C P+C
Sbjct: 449 ARPALSVPLASFDASDLECSLCMRLFYEPVTTP-CGHTFCLKCL-ERCLDHNAKC-PLCK 505
Query: 67 IDLG-CLPVEKLRPDHNLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVV 123
L CL K + ++++ AK P K R+ E M +S K + ++
Sbjct: 506 DGLSQCLASRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCTMAY 565
Query: 124 STPKVPQH 131
T P H
Sbjct: 566 PTVPCPLH 573
>UNIPROTKB|Q5D7I6 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:121123 "Alouatta sara" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 HOVERGEN:HBG001357 EMBL:AY843511
ProteinModelPortal:Q5D7I6 SMR:Q5D7I6 GO:GO:0031664 Uniprot:Q5D7I6
Length = 551
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG 70
+V +K E +TCP+C LL E ++ C H+FC+ CI + CP+C +
Sbjct: 6 LVNIKEE-----VTCPICLELLTEPLSLD-CGHSFCQACITANHKESRERSCPLCRVSYH 59
Query: 71 CLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSL 118
E LRP+ +L +I ++ R + +PE + A+ E+ L
Sbjct: 60 S---ENLRPNRHLANIAERL----REVMLSPEEGQKVDRCARHGEKLL 100
>MGI|MGI:1923931 [details] [associations]
symbol:Trim12a "tripartite motif-containing 12A"
species:10090 "Mus musculus" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 MGI:MGI:1923931
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00690000101646 HOVERGEN:HBG001357
HOGENOM:HOG000234134 EMBL:AF220126 EMBL:AK009769 IPI:IPI00469341
RefSeq:NP_076324.2 UniGene:Mm.458309 UniGene:Mm.486388
ProteinModelPortal:Q99PQ1 SMR:Q99PQ1 STRING:Q99PQ1 PRIDE:Q99PQ1
Ensembl:ENSMUST00000070943 Ensembl:ENSMUST00000106839 GeneID:76681
KEGG:mmu:76681 CTD:76681 eggNOG:NOG310455 NextBio:345615
Bgee:Q99PQ1 CleanEx:MM_TRIM12 Genevestigator:Q99PQ1
GermOnline:ENSMUSG00000066258 Uniprot:Q99PQ1
Length = 284
Score = 114 (45.2 bits), Expect = 0.00045, P = 0.00045
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 17 ETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YEKLS-DEEADCCPVCNIDLGCL 72
+ L+ +TCP+C +L+ + + C HTFC+ CI +E + D++ CPVC I
Sbjct: 7 KNLKEEVTCPVCLNLMVKPVSAD-CGHTFCQGCITLYFESIKCDKKVFICPVCRISY--- 62
Query: 73 PVEKLRPDHNLQDI--RAKIF---PFKRRKV 98
LRP+ N+ +I R K+F P + +KV
Sbjct: 63 QFSNLRPNRNVANIVERLKMFKPSPEEEQKV 93
>UNIPROTKB|E2QUI8 [details] [associations]
symbol:CHFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:55743
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
EMBL:AAEX03014572 EMBL:AAEX03014573 RefSeq:XP_534631.3
Ensembl:ENSCAFT00000009830 GeneID:477434 KEGG:cfa:477434
Uniprot:E2QUI8
Length = 661
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 14 VKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLP 73
VK + +E +TC +C LL + ++ C+HTFC C Y E + CP C C P
Sbjct: 291 VKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWM-ERSTWCPTCR----C-P 343
Query: 74 VEKLRPDHNLQDI 86
VE++ +H L ++
Sbjct: 344 VERICKNHILNNL 356
>UNIPROTKB|Q5F3B2 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9031
"Gallus gallus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR015880 PROSITE:PS50089 SMART:SM00184 SMART:SM00355
Prosite:PS00518 Pfam:PF05605 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR003903 PROSITE:PS50330 InterPro:IPR017907
InterPro:IPR008598 HOGENOM:HOG000230946 HOVERGEN:HBG074331
EMBL:AJ851738 IPI:IPI00589511 RefSeq:NP_001012953.1
UniGene:Gga.8507 ProteinModelPortal:Q5F3B2 GeneID:425360
KEGG:gga:425360 CTD:115992 eggNOG:NOG149065 InParanoid:Q5F3B2
OrthoDB:EOG4DJJX8 NextBio:20827453 ArrayExpress:Q5F3B2
Uniprot:Q5F3B2
Length = 244
Score = 112 (44.5 bits), Expect = 0.00053, P = 0.00053
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 17 ETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLPVEK 76
E LEA +CP+C + A I+ C HTFC +C+ L + CP+C + VEK
Sbjct: 32 EALEAQFSCPICLEVFHRAVGIAGCGHTFCGECLQPCLQ-VPSPLCPLCRMPFDPKKVEK 90
Query: 77 LRP-DHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVP 129
+ L +A + KV ++ +S AK +E+ +++ P VP
Sbjct: 91 ASSVEKQLSSYKAPCRGCSK-KVTLAKMRSHVSSCAKVQEQ-MANCPKFVPVVP 142
>UNIPROTKB|B3KUN7 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 Pfam:PF02190 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:CH471161 HOGENOM:HOG000060199 HOVERGEN:HBG081924 EMBL:AL772284
UniGene:Hs.144266 HGNC:HGNC:21152 EMBL:AK097641 IPI:IPI00902452
SMR:B3KUN7 Ensembl:ENST00000422289 UCSC:uc004eqz.3 Uniprot:B3KUN7
Length = 503
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 35/112 (31%), Positives = 49/112 (43%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+ C LC L E T C HTFC KC+ E+ D A C P+C L CL K +
Sbjct: 209 LECALCMRLFYEPVTTP-CGHTFCLKCL-ERCLDHNAKC-PLCKDGLSQCLASRKYSKNV 265
Query: 82 NLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
++++ AK P K R+ E M +S K + ++ T P H
Sbjct: 266 IMEELIAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLH 317
>UNIPROTKB|H0Y7Q8 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 EMBL:AL772284 HGNC:HGNC:21152
ProteinModelPortal:H0Y7Q8 Ensembl:ENST00000439603 Uniprot:H0Y7Q8
Length = 525
Score = 117 (46.2 bits), Expect = 0.00060, P = 0.00060
Identities = 35/112 (31%), Positives = 49/112 (43%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+ C LC L E T C HTFC KC+ E+ D A C P+C L CL K +
Sbjct: 231 LECALCMRLFYEPVTTP-CGHTFCLKCL-ERCLDHNAKC-PLCKDGLSQCLASRKYSKNV 287
Query: 82 NLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
++++ AK P K R+ E M +S K + ++ T P H
Sbjct: 288 IMEELIAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLH 339
>UNIPROTKB|H3BPZ9 [details] [associations]
symbol:RNF166 "RING finger protein 166" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC138028 HGNC:HGNC:28856 ChiTaRS:RNF166
Ensembl:ENST00000562544 Bgee:H3BPZ9 Uniprot:H3BPZ9
Length = 148
Score = 102 (41.0 bits), Expect = 0.00063, P = 0.00063
Identities = 34/126 (26%), Positives = 56/126 (44%)
Query: 19 LEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLPVEKLR 78
LEA TCP+C + I C HTFC +C+ L + CP+C + V+K
Sbjct: 6 LEAQYTCPICLEVYHRPVAIGSCGHTFCGECLQPCLQ-VPSPLCPLCRLPFDPKKVDKAT 64
Query: 79 PDHNLQDIRAKIFPFK--RRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQHTGL-T 135
H + + + P + +KV ++ IS K +E+ +++ P VP + +
Sbjct: 65 --HVEKQLSSYKAPCRGCNKKVTLAKMRVHISSCLKVQEQ-MANCPKFVPVVPTSQPIPS 121
Query: 136 GKRTKG 141
G R G
Sbjct: 122 GGRAWG 127
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 93 (37.8 bits), Expect = 0.00067, P = 0.00067
Identities = 31/105 (29%), Positives = 42/105 (40%)
Query: 18 TLEACMTCPLCNSLLREATTISLCLHTFCRKCIYE-KLSDEEADCCPVCNIDLGCLPVEK 76
+LE +TC +C LR+ TI C H FCR C + + CP+C E
Sbjct: 9 SLEEEVTCSICLDYLRDPVTID-CGHVFCRSCTTDVRPISGSRPVCPLCKKPF---KKEN 64
Query: 77 LRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSL 121
+RP L + I K K + P + AK ER L
Sbjct: 65 IRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLCERHREKL 109
>RGD|1306360 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger domains,
E3 ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000278 "mitotic cell cycle"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016605 "PML
body" evidence=ISO] [GO:0019941 "modification-dependent protein
catabolic process" evidence=ISO] InterPro:IPR001841
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 Pfam:PF13639
PROSITE:PS50006 PROSITE:PS50089 SMART:SM00184 SMART:SM00240
RGD:1306360 Prosite:PS00518 GO:GO:0000166 GO:GO:0046872
GO:GO:0016605 GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879
EMBL:CH473973 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0000209 GO:GO:0007093 GO:GO:0019941
InterPro:IPR017907 CTD:55743 eggNOG:NOG253207 HOGENOM:HOG000290186
KO:K10644 OrthoDB:EOG43FGWJ HOVERGEN:HBG048005 IPI:IPI00190180
EMBL:BC087162 RefSeq:NP_001009258.1 UniGene:Rn.15515 SMR:Q5PQJ8
STRING:Q5PQJ8 GeneID:288734 KEGG:rno:288734 UCSC:RGD:1306360
InParanoid:Q5PQJ8 NextBio:628621 Genevestigator:Q5PQJ8
Uniprot:Q5PQJ8
Length = 663
Score = 121 (47.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 14 VKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLP 73
VK + +E +TC +C LL + ++ C+HTFC C Y E + CP C C P
Sbjct: 292 VKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWM-ERSSLCPTCR----C-P 344
Query: 74 VEKLRPDHNLQDI 86
VE++ +H L ++
Sbjct: 345 VERICKNHILNNL 357
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 155 MLEDKKESSIEDHPMSSSSP------DSLNKNAQNRRQESYKAEPSSEQGPNK----VGE 204
+L + E+ + HP S S D+ NK Q+ Q + S E+G ++ + +
Sbjct: 353 ILNNLVEAYLLQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 412
Query: 205 ITEAKADLWTP 215
+ +D+ P
Sbjct: 413 VDSESSDISQP 423
>MGI|MGI:2444898 [details] [associations]
symbol:Chfr "checkpoint with forkhead and ring finger
domains" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0000278 "mitotic cell cycle" evidence=IMP]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007093 "mitotic cell cycle
checkpoint" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0016605 "PML body" evidence=ISO] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019941 "modification-dependent protein catabolic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 UniPathway:UPA00143 MGI:MGI:2444898
Prosite:PS00518 GO:GO:0051301 GO:GO:0007067 GO:GO:0000166
GO:GO:0046872 GO:GO:0016605 GO:GO:0008270 EMBL:CH466529
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0007093 InterPro:IPR017907 CTD:55743 eggNOG:NOG253207
GeneTree:ENSGT00400000022306 KO:K10644 OMA:LYWGCAR
HOVERGEN:HBG048005 ChiTaRS:CHFR EMBL:AK052473 EMBL:AK077629
EMBL:AK147892 EMBL:AK154038 EMBL:AK155295 EMBL:AK155525
EMBL:AK169182 EMBL:AK169193 EMBL:BC049792 IPI:IPI00336194
IPI:IPI00400444 IPI:IPI00653343 IPI:IPI00944802 RefSeq:NP_766305.2
UniGene:Mm.30264 ProteinModelPortal:Q810L3 SMR:Q810L3 STRING:Q810L3
PhosphoSite:Q810L3 PRIDE:Q810L3 Ensembl:ENSMUST00000014812
Ensembl:ENSMUST00000112519 GeneID:231600 KEGG:mmu:231600
UCSC:uc008ypv.2 UCSC:uc008ypw.2 UCSC:uc008ypx.2 UCSC:uc008ypz.2
InParanoid:Q3TFD8 NextBio:380643 Bgee:Q810L3 CleanEx:MM_CHFR
Genevestigator:Q810L3 GermOnline:ENSMUSG00000014668 Uniprot:Q810L3
Length = 664
Score = 121 (47.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 14 VKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLP 73
VK + +E +TC +C LL + ++ C+HTFC C Y E + CP C C P
Sbjct: 292 VKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWM-ERSSLCPTCR----C-P 344
Query: 74 VEKLRPDHNLQDI 86
VE++ +H L ++
Sbjct: 345 VERICKNHILNNL 357
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 155 MLEDKKESSIEDHPMSSSSP------DSLNKNAQNRRQESYKAEPSSEQGPNK----VGE 204
+L + E+ + HP S S D+ NK Q+ Q + S E+G ++ + +
Sbjct: 353 ILNNLVEAYLIQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 412
Query: 205 ITEAKADLWTP 215
+ +D+ P
Sbjct: 413 VDSESSDISQP 423
>UNIPROTKB|F1LN16 [details] [associations]
symbol:Chfr "Protein Chfr" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0000278
"mitotic cell cycle" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000253 InterPro:IPR008984
Pfam:PF00498 Pfam:PF13639 PROSITE:PS50006 PROSITE:PS50089
SMART:SM00184 SMART:SM00240 RGD:1306360 Prosite:PS00518
GO:GO:0000166 GO:GO:0046872 GO:GO:0016605 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
InterPro:IPR017907 GO:GO:0000278 GeneTree:ENSGT00400000022306
OMA:LYWGCAR IPI:IPI00190180 Ensembl:ENSRNOT00000056639
ArrayExpress:F1LN16 Uniprot:F1LN16
Length = 664
Score = 121 (47.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 14 VKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLGCLP 73
VK + +E +TC +C LL + ++ C+HTFC C Y E + CP C C P
Sbjct: 292 VKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAAC-YSGWM-ERSSLCPTCR----C-P 344
Query: 74 VEKLRPDHNLQDI 86
VE++ +H L ++
Sbjct: 345 VERICKNHILNNL 357
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 155 MLEDKKESSIEDHPMSSSSP------DSLNKNAQNRRQESYKAEPSSEQGPNK----VGE 204
+L + E+ + HP S S D+ NK Q+ Q + S E+G ++ + +
Sbjct: 353 ILNNLVEAYLLQHPDKSRSEEDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSD 412
Query: 205 ITEAKADLWTP 215
+ +D+ P
Sbjct: 413 VDSESSDISQP 423
>UNIPROTKB|Q5D7I2 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:43777 "Pithecia pithecia" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0002218 "activation of innate
immune response" evidence=ISS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0008329
"pattern recognition receptor activity" evidence=ISS] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=ISS] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISS] [GO:0051092 "positive
regulation of NF-kappaB transcription factor activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=ISS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0046872 GO:GO:0043123 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0043410 GO:GO:0051092
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000932 GO:GO:0004842
InterPro:IPR017907 GO:GO:0070534 InterPro:IPR001870 PROSITE:PS50188
HSSP:P28990 GO:GO:0008329 InterPro:IPR003879 PRINTS:PR01407
HOVERGEN:HBG001357 GO:GO:0031664 EMBL:AY843515
ProteinModelPortal:Q5D7I2 SMR:Q5D7I2 Uniprot:Q5D7I2
Length = 494
Score = 115 (45.5 bits), Expect = 0.00092, P = 0.00092
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 8 ARHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YEKLSDEEAD-CCP 63
+R ++ +K E +TCP+C LL E ++ C H+FC+ CI ++K + + CP
Sbjct: 3 SRILMNIKEE-----VTCPICLELLTEPLSLD-CGHSFCQACITANHKKSMLHQGERSCP 56
Query: 64 VCNIDLGCLPVEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSL 118
+C I P E LRP+ +L +I ++ R + +PE + A+ E+ L
Sbjct: 57 LCRISY---PSENLRPNRHLANIVERL----REVMLSPEEGQKVDHCARHGEKLL 104
>ZFIN|ZDB-GENE-101021-4 [details] [associations]
symbol:lonrf1 "LON peptidase N-terminal domain and
ring finger 1" species:7955 "Danio rerio" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF02190 PROSITE:PS50005
PROSITE:PS50089 PROSITE:PS50293 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-101021-4 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
GeneTree:ENSGT00440000033329 EMBL:FP016207 EMBL:FP085387
EMBL:FP101912 IPI:IPI00998181 Ensembl:ENSDART00000109935
Bgee:F1QKK1 Uniprot:F1QKK1
Length = 605
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 41/130 (31%), Positives = 60/130 (46%)
Query: 9 RHVVKVKRETLEACMT-----CPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCP 63
R V V RE+ + +T CPLC L E T C HTFC+ CI E+ D C P
Sbjct: 294 RGVCSVGRESCLSVLTVSDFECPLCIRLFYEPVTTP-CGHTFCKNCI-ERSLDHNLRC-P 350
Query: 64 VCNIDLG-CLPVEKLRPDHNLQDIRAKIFP---FKRRKVQAPEVMPSISLPAKRKERSLS 119
+C L K P LQ+I +++FP +R++V E+ +L K+ +
Sbjct: 351 LCKQPLQEYFKNRKYNPTVLLQEIMSRLFPQQLAERKQVHEAEMAELSNLT---KDIPIF 407
Query: 120 SLVVSTPKVP 129
V+ P +P
Sbjct: 408 VCTVAYPGIP 417
>UNIPROTKB|K7GNS2 [details] [associations]
symbol:K7GNS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Pfam:PF00097 Prosite:PS00518
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00700000104307 EMBL:CU693419
Ensembl:ENSSSCT00000034844 Uniprot:K7GNS2
Length = 250
Score = 110 (43.8 bits), Expect = 0.00095, P = 0.00095
Identities = 32/91 (35%), Positives = 43/91 (47%)
Query: 19 LEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADC-CPVCNIDLGCLPVEKL 77
L+A +CP+C L++ T C H FC CI ++ D + D CPVC L P L
Sbjct: 10 LQAEASCPICLDYLQDPVTTD-CGHNFCHSCILQRWEDLQGDFPCPVC---LQHCPDRSL 65
Query: 78 RPDHNL---QDIRAKIFPFKRRKVQAPEVMP 105
R + L D+ K P RRK + E P
Sbjct: 66 RRNTQLCRMVDV-VKQLPNTRRKRKRQEEKP 95
>UNIPROTKB|E7EQQ5 [details] [associations]
symbol:TRIM5 "Tripartite motif-containing protein 5"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC015691 EMBL:AC025016
EMBL:AC131574 HGNC:HGNC:16276 ChiTaRS:TRIM5 EMBL:AC109341
IPI:IPI00879744 ProteinModelPortal:E7EQQ5 SMR:E7EQQ5
Ensembl:ENST00000412903 ArrayExpress:E7EQQ5 Bgee:E7EQQ5
Uniprot:E7EQQ5
Length = 209
Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 11 VVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCI---YEK-LSDEEADCCPVCN 66
+V VK E +TCP+C LL + ++ C H+FC+ C+ ++K + D+ CPVC
Sbjct: 6 LVNVKEE-----VTCPICLELLTQPLSLD-CGHSFCQACLTANHKKSMLDKGESSCPVCR 59
Query: 67 IDLGCLPVEKLRPDHNLQDIRAKI 90
I P E +RP+ ++ +I K+
Sbjct: 60 ISYQ--P-ENIRPNRHVANIVEKL 80
>ASPGD|ASPL0000000141 [details] [associations]
symbol:AN5961 species:162425 "Emericella nidulans"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 EMBL:BN001301 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AACD01000101 InterPro:IPR015947 SUPFAM:SSF88697
InterPro:IPR017907 GO:GO:0004176 eggNOG:COG2802 OrthoDB:EOG437VPJ
RefSeq:XP_663565.1 ProteinModelPortal:Q5B0G9
EnsemblFungi:CADANIAT00007064 GeneID:2870893 KEGG:ani:AN5961.2
HOGENOM:HOG000163327 OMA:DCQVCYS Uniprot:Q5B0G9
Length = 623
Score = 116 (45.9 bits), Expect = 0.00098, P = 0.00098
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 9 RHVVKVKRETLEACMTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNID 68
R + K+ R T+ + C +C SL+ + T C HTFCR+C+ LS ++ CP+C
Sbjct: 189 RTLTKL-RATVRNELDCQVCYSLILDPLTTP-CGHTFCRRCVAMALS--HSNLCPICRRK 244
Query: 69 LGCLP--VEKLRPDHNLQDIRAKIFPFKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTP 126
L +P V R + +L DI + P + +A +V +I L ++ K L+ + ++ P
Sbjct: 245 LN-MPSSVRSERNNKSLSDIIETLLPDEVASRRA-DVASNIELNSEGK-LPLAVVSLAFP 301
Query: 127 KVP 129
+P
Sbjct: 302 TMP 304
>UNIPROTKB|Q496Y0 [details] [associations]
symbol:LONRF3 "LON peptidase N-terminal domain and RING
finger protein 3" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR003111
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF02190 PROSITE:PS50005 PROSITE:PS50089 PROSITE:PS50293
SMART:SM00028 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR013105
Pfam:PF07719 InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907
HSSP:Q8IZP6 GO:GO:0004176 eggNOG:COG2802 HOGENOM:HOG000060199
HOVERGEN:HBG081924 EMBL:AK026265 EMBL:AK091777 EMBL:AL772284
EMBL:BC099847 EMBL:BC100671 EMBL:BC103491 IPI:IPI00300753
IPI:IPI00640460 IPI:IPI00827481 RefSeq:NP_001027026.1
RefSeq:NP_079054.3 UniGene:Hs.144266 ProteinModelPortal:Q496Y0
SMR:Q496Y0 IntAct:Q496Y0 PhosphoSite:Q496Y0 DMDM:121949074
PRIDE:Q496Y0 Ensembl:ENST00000304778 Ensembl:ENST00000365713
Ensembl:ENST00000371628 Ensembl:ENST00000481285 GeneID:79836
KEGG:hsa:79836 UCSC:uc004eqw.3 UCSC:uc004eqx.3 CTD:79836
GeneCards:GC0XP118108 HGNC:HGNC:21152 neXtProt:NX_Q496Y0
PharmGKB:PA134900980 InParanoid:Q496Y0 OMA:VKLSALM PhylomeDB:Q496Y0
GenomeRNAi:79836 NextBio:69492 ArrayExpress:Q496Y0 Bgee:Q496Y0
CleanEx:HS_LONRF3 Genevestigator:Q496Y0 Uniprot:Q496Y0
Length = 759
Score = 117 (46.2 bits), Expect = 0.00098, P = 0.00098
Identities = 35/112 (31%), Positives = 49/112 (43%)
Query: 23 MTCPLCNSLLREATTISLCLHTFCRKCIYEKLSDEEADCCPVCNIDLG-CLPVEKLRPDH 81
+ C LC L E T C HTFC KC+ E+ D A C P+C L CL K +
Sbjct: 465 LECALCMRLFYEPVTTP-CGHTFCLKCL-ERCLDHNAKC-PLCKDGLSQCLASRKYSKNV 521
Query: 82 NLQDIRAKIFP--FKRRKVQAPEVMPSISLPAKRKERSLSSLVVSTPKVPQH 131
++++ AK P K R+ E M +S K + ++ T P H
Sbjct: 522 IMEELIAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLH 573
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.129 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 367 344 0.00097 116 3 11 23 0.45 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 125
No. of states in DFA: 609 (65 KB)
Total size of DFA: 230 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.43u 0.10s 35.53t Elapsed: 00:00:02
Total cpu time: 35.44u 0.10s 35.54t Elapsed: 00:00:02
Start: Thu May 9 18:17:54 2013 End: Thu May 9 18:17:56 2013
WARNINGS ISSUED: 1