Your job contains 1 sequence.
>017738
MLNANSSGDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHER
MWVSAACENGQATFSCNTDAASLRLSCDADKHLANFLAHHHHARVPAPPFSDLFTAPSST
YLPDPMFDTEKEVTAPTIEVDEDEMDSWLLLEPANHDNQMNSGHTYVQELDESFGMEYNS
CTKHECQDQNNLQQLQCTHRGDNGSDGVVPVQPFQVKDKEEQQKQQQQQENEYFSRKYEA
SKAAFINNPSMSQTVPVSGILPKATRADISSSYTKYSQGTNDLFPNFSFFVPLQFSPMNR
VAKVLRYREKRKARRFEKKIRYASRKAYAEARPRVKGRFARKTEMDFEVDEMFSIEEYGY
GIVPSY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017738
(366 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 251 9.6e-44 2
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 241 1.4e-38 2
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 215 2.3e-37 3
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 393 1.7e-36 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 377 8.3e-35 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 188 1.2e-26 3
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 291 1.1e-25 1
UNIPROTKB|Q9FRZ7 - symbol:Hd1 "Hd1 protein" species:39946... 254 9.0e-22 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 241 2.1e-20 1
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 133 2.2e-08 1
TAIR|locus:2091082 - symbol:COL9 "CONSTANS-like 9" specie... 118 3.7e-08 2
TAIR|locus:2043288 - symbol:AT2G47890 species:3702 "Arabi... 123 5.4e-08 2
TAIR|locus:2164718 - symbol:BBX8 "B-box domain protein 8"... 119 9.3e-08 2
TAIR|locus:2010504 - symbol:BBX13 "B-box domain protein 1... 110 4.1e-06 2
TAIR|locus:2051104 - symbol:BBX12 "B-box domain protein 1... 105 6.1e-06 2
TAIR|locus:2129860 - symbol:BBX9 "B-box domain protein 9"... 90 1.6e-05 2
TAIR|locus:2088748 - symbol:BBX10 "B-box domain protein 1... 98 2.2e-05 2
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 94 2.4e-05 2
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 97 0.00014 2
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 93 0.00019 2
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 95 0.00022 2
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 251 (93.4 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 72/233 (30%), Positives = 107/233 (45%)
Query: 141 DEDEMDSWLLLEPANHDNQMNSGHTYVQELDESFGMEYNSCTKHEXXXXXXXXXXXXTH- 199
D+ E+ SWLL P + N+G FG+EY + TH
Sbjct: 124 DDREVASWLLPNPGKNIGNQNNGFL--------FGVEYLDLVDYSSSMDNQFEDNQYTHY 175
Query: 200 RGDNGSDGVVPVQPFXXXXXXXXXXXXXXXXNEY-FSR--KYEASKAAFINNPSMSQTVP 256
+ G DGVVP+Q Y FS Y + +N+ + ++
Sbjct: 176 QRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMD 235
Query: 257 VSGILPKATRADISSSYTKYSQGTNDLFPNFSFFVPLQFSPMNRVAKVLXXXXXXXXXXX 316
+S ++P++T +DI+ + + ++ T D V Q +PM R A+VL
Sbjct: 236 IS-VVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKF 294
Query: 317 XXXXXYASRKAYAEARPRVKGRFARKTEMDFEVDEMFS---IEEYGYGIVPSY 366
YASRKAYAE RPR+KGRFA++ E + E +E+FS + E GYGIVPS+
Sbjct: 295 DKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347
Score = 227 (85.0 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 56/158 (35%), Positives = 74/158 (46%)
Query: 15 GDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATF 74
G W R C+TC++A T+YC AY C +CD RVHA N +A HER+ V +CE+ A F
Sbjct: 10 GTWARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAF 69
Query: 75 SCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDPMFDTEKEVT 134
C DAASL +CDA+ L S+ P E
Sbjct: 70 LCKADAASLCTACDAE----IHSANPLARRHQRVPILPLSANSCSSMAPS-------ETD 118
Query: 135 APTIEVDEDEMDSWLLLEPANHDNQMNSGHTY-VQELD 171
A E D+ E+ SWLL P + N+G + V+ LD
Sbjct: 119 ADNDE-DDREVASWLLPNPGKNIGNQNNGFLFGVEYLD 155
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 241 (89.9 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 57/158 (36%), Positives = 77/158 (48%)
Query: 8 GDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAAC 67
G+G G P W R C+ C+AA S +YC AY C SCD RVHA N +A HER+ V AC
Sbjct: 24 GEGSGCP--WARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEAC 81
Query: 68 ENGQATFSCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDPMF 127
E A +C DAA+L ++CD T P+++ L
Sbjct: 82 ERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVAPL--PAITIPATSVL----- 134
Query: 128 DTEKEVTAPTIEVDEDE-MDSWLLLEPANHDNQMNSGH 164
E V T+ D+DE +DSWLLL + +N N+ +
Sbjct: 135 -AEAVVATATVLGDKDEEVDSWLLLSKDSDNNNNNNNN 171
Score = 195 (73.7 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 246 INNPSMSQTVPVSGILPKATRADISSSYTKYSQGTNDLFPNFSFFVPLQFSPMNRVAKVL 305
I+N S+S + +GI+P +T D+ +S G +LF S + L FS M+R A+VL
Sbjct: 285 ISN-SISFSSMEAGIVPDSTVIDMPNSRILTPAGAINLFSGPSLQMSLHFSSMDREARVL 343
Query: 306 XXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEMDFEVDEMFS---IEEYGYGI 362
Y +RKAYAEARPR+KGRFA+++++ EVD+MFS + + YG
Sbjct: 344 RYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFSTAALSDGSYGT 403
Query: 363 VP 364
VP
Sbjct: 404 VP 405
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 215 (80.7 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 40/81 (49%), Positives = 50/81 (61%)
Query: 8 GDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAAC 67
G+G G P W R C+ C+AA S +YC AY C SCD RVHA N +A HER+ V AC
Sbjct: 24 GEGSGCP--WARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEAC 81
Query: 68 ENGQATFSCNTDAASLRLSCD 88
E A +C DAA+L ++CD
Sbjct: 82 ERAPAALACRADAAALCVACD 102
Score = 195 (73.7 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 246 INNPSMSQTVPVSGILPKATRADISSSYTKYSQGTNDLFPNFSFFVPLQFSPMNRVAKVL 305
I+N S+S + +GI+P +T D+ +S G +LF S + L FS M+R A+VL
Sbjct: 273 ISN-SISFSSMEAGIVPDSTVIDMPNSRILTPAGAINLFSGPSLQMSLHFSSMDREARVL 331
Query: 306 XXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEMDFEVDEMFS---IEEYGYGI 362
Y +RKAYAEARPR+KGRFA+++++ EVD+MFS + + YG
Sbjct: 332 RYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFSTAALSDGSYGT 391
Query: 363 VP 364
VP
Sbjct: 392 VP 393
Score = 78 (32.5 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 21/77 (27%), Positives = 34/77 (44%)
Query: 18 MRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYN---SMALPHERMWVSAACENGQATF 74
+R C C+ A + L C A C +CD +VH+ N ++ +P + A
Sbjct: 75 VRVCEACERAPAALACRADAAALCVACDVQVHSANPLPAITIPATSVLAEAVVATATVLG 134
Query: 75 SCNTDAAS-LRLSCDAD 90
+ + S L LS D+D
Sbjct: 135 DKDEEVDSWLLLSKDSD 151
Score = 62 (26.9 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 117 PSSTYLPDPMFDTEKEVTAPTIEVDEDE-MDSWLLLEPANHDNQMNSGH 164
P+ T +P E V T+ D+DE +DSWLLL + +N N+ +
Sbjct: 112 PAIT-IPATSVLAEAVVATATVLGDKDEEVDSWLLLSKDSDNNNNNNNN 159
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 67 CENGQATFSCNTDAASLRLSCDA 89
C + C DAA L SCDA
Sbjct: 38 CRAAPSVVYCRADAAYLCASCDA 60
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 114/363 (31%), Positives = 167/363 (46%)
Query: 16 DWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFS 75
+W + C+TC++A T+YC AY C SCD +VHA N +A HER+ V +CE A F
Sbjct: 7 NWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFF 66
Query: 76 CNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDP-MFDTEKEVT 134
C DAASL +CD++ +++ ++ + + + D E +
Sbjct: 67 CKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLV 126
Query: 135 APTIEVDEDEMD--SWLLLEPANHDNQMNSGHTYVQELDESFGM-EYNSCTKHEXXXXXX 191
E DEDE + SWLL P + N N+ + DE + +Y+S K
Sbjct: 127 LGQEEEDEDEAEAASWLL--PNSGKNSGNNNGFSIG--DEFLNLVDYSSSDKQFTDQSNQ 182
Query: 192 XXXXXXTHRGDNGSDGVVPVQPFXXXXXXXXXXXXXXXXNEYFSRKYEASKAAFINNPSM 251
+ G DGVVP+Q N S + A +N S+
Sbjct: 183 YQLDCNVPQRSYGEDGVVPLQ------IEVSKGMYQEQQNFQLSINCGSWGALRSSNGSL 236
Query: 252 SQTVPVS----GILPKATRADISSSYTKYSQGTNDLFPNFSFFVPLQF-SPMNRVAKVLX 306
S V VS G++P++T +D + S + + D P + P Q SP +R A+VL
Sbjct: 237 SHMVNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPP----YPPAQMLSPRDREARVLR 292
Query: 307 XXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEMDFEVDEMFSIE---EYGYGIV 363
YASRKAYAE RPR+KGRFA+K ++D E ++ FS + GYGIV
Sbjct: 293 YREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIV 352
Query: 364 PSY 366
PS+
Sbjct: 353 PSF 355
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 112/383 (29%), Positives = 174/383 (45%)
Query: 1 MLNANSSGDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHER 60
ML S+ G G + R C+TC++ T+YCH AY C SCD +VH+ N +A H+R
Sbjct: 1 MLKQESNDIGSG-ENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKR 59
Query: 61 MWVSAACENGQATFSCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSST 120
+ V +CE A F C D ASL +CD++ + F++ ++T
Sbjct: 60 VRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTT 119
Query: 121 YLPDP--MFDTEKEVTAPTIEVDEDEMD-----SWLLLEPANHDNQMNSGHTYVQELDES 173
+ M D EK + E +E + D SWL ++N N+G + DE
Sbjct: 120 HHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS---DEY 176
Query: 174 FGM-EYNSCTKHEXXXXXXXXXXX-XTHRGDNGSDGVVPVQPFXXXXXXXXXXXXXXXXN 231
+ +YNS ++ + G D VVP++ N
Sbjct: 177 LNLVDYNSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLK-----LEESRGHQCHNQQN 231
Query: 232 EYFSRKYEASKAAFINNPSMSQTVPVS----GILPKATRADISSSYTKYSQGTNDLFPN- 286
F+ KY +S + +N S++ +S G++P++T ++S+ + +GT + P+
Sbjct: 232 FQFNIKYGSSGTHYNDNGSINHNAYISSMETGVVPESTACVTTASHPRTPKGTVEQQPDP 291
Query: 287 -FSFFVPLQFSPMNRVAKVLXXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEM 345
Q SPM+R A+VL YASRKAYAE RPRV GRFA++ E+
Sbjct: 292 ASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR-EI 350
Query: 346 DFEVDEMFSIEEY--GYGIVPSY 366
+ E ++ Y GYGIVPS+
Sbjct: 351 EAEEQGFNTMLMYNTGYGIVPSF 373
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 188 (71.2 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 19 RTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNT 78
R C++CK+ +TL+C A+ C CD ++H N +A HER+W+ CE A +C
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKA 65
Query: 79 DAASLRLSCDAD 90
DAA+L ++CD D
Sbjct: 66 DAAALCVTCDRD 77
Score = 141 (54.7 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 48/141 (34%), Positives = 70/141 (49%)
Query: 232 EYFSRKYEASKAA-----FINNPSMSQTVPVSGILPKATRADISSSYTKYSQGTNDLFPN 286
+YF+ ASK + FIN ++T+ V ++P+ S T ++ TN P
Sbjct: 171 DYFNFDLSASKISQQGFNFINQTVSTRTIDVP-LVPE------SGGVT--AEMTNTETP- 220
Query: 287 FSFFVPLQFSPMNRVAKVLXXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEMD 346
+Q SP R A+VL YASRKAYAE RPR+KGRFA++T D
Sbjct: 221 -----AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT--D 273
Query: 347 FEVDEMFSIEEYG-YGIVPSY 366
++ + YG +G+VPS+
Sbjct: 274 SRENDGGDVGVYGGFGVVPSF 294
Score = 81 (33.6 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 17 WMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERM 61
W+ C C+ A + + C A C +CD +H+ N ++ HER+
Sbjct: 49 WL--CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
Score = 45 (20.9 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 198 THRGDNGSDGVVPVQ 212
+ +G+DGVVPVQ
Sbjct: 149 SEENSSGNDGVVPVQ 163
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 100/374 (26%), Positives = 155/374 (41%)
Query: 15 GDW---MRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQ 71
G W R+C+ CK+ + ++C A+ C +CD R+H++ HER+WV CE
Sbjct: 13 GGWGAAARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFTR----HERVWVCEVCEQAP 68
Query: 72 ATFSCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDPM----F 127
A +C DAA+L +SCDAD F TA +
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKISASSTFGILGS 128
Query: 128 DTEKEVTAPTIEVDEDEMDSWLLLEPANHDNQMNSGHTYVQELDESFGMEYNSCTKHEXX 187
T ++TA + D+ + WLL N ++ G ++ + +++ E
Sbjct: 129 STTVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEFP 188
Query: 188 XXXXXXXXXXTHRGDNGSDGVVPVQPFXXXXXXXXXXXXXXXXNEY-FSRKYEASKAAFI 246
H+ + G D +VPVQ N++ F + SK +
Sbjct: 189 NSFNH------HQNNAGGDSLVPVQ--------TKTEPLPLTNNDHCFDIDFCRSKLSAF 234
Query: 247 NNPSMSQTVPVS------GILPKA-TRADIS-SSYTKYSQGTNDLFPNFSFFVPLQFSPM 298
PS S + VS G++P T ++ S+ T + G + Q S M
Sbjct: 235 TYPSQSVSHSVSTSSIEYGVVPDGNTNNSVNRSTITSSTTGGDH-----------QASSM 283
Query: 299 NRVAKVLXXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEMDFEVDEMFSIEEY 358
+R A+VL YASRKAYAE+RPR+KGRFA++TE E D++F Y
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTET--ENDDIFLSHVY 341
Query: 359 G------YGIVPSY 366
YG+VP++
Sbjct: 342 ASAAHAQYGVVPTF 355
>UNIPROTKB|Q9FRZ7 [details] [associations]
symbol:Hd1 "Hd1 protein" species:39946 "Oryza sativa Indica
Group" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041839 EMBL:AB564434 Gramene:Q9FRZ7
Uniprot:Q9FRZ7
Length = 342
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 61/180 (33%), Positives = 91/180 (50%)
Query: 8 GDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAAC 67
G+G G P W R C+ C+AA S +YC AY C SCD RVHA N +A HER+ V AC
Sbjct: 24 GEGSGCP--WARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEAC 81
Query: 68 ENGQATFSCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDPMF 127
E A +C DAA+L ++CD T P+++ L + +
Sbjct: 82 EQAPAALACRADAAALCVACDVQVHSANPLARRHQRVPVAPL--PAITIPATSVLAEAVV 139
Query: 128 DTEKEVTAPTIEVDEDEMDSWLLL-EPANHDNQMNSGHT-----YVQELDESFGME-YNS 180
TA + ++E+DSW++L + +N++N N+ ++ Y E+DE F + YNS
Sbjct: 140 -----ATATVLGGKDEEVDSWIILSKDSNNNNNNNNSNSSNNGMYFGEVDEYFDLVGYNS 194
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 57/158 (36%), Positives = 77/158 (48%)
Query: 8 GDGDGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAAC 67
G+G G P W R C+ C+AA S +YC AY C SCD RVHA N +A HER+ V AC
Sbjct: 24 GEGSGCP--WARPCDGCRAAPSVVYCRADAAYLCASCDARVHAANRVASRHERVRVCEAC 81
Query: 68 ENGQATFSCNTDAASLRLSCDADKXXXXXXXXXXXXXXXXXXFSDLFTAPSSTYLPDPMF 127
E A +C DAA+L ++CD T P+++ L
Sbjct: 82 ERAPAALACRADAAALCVACDVQVYSANPLARRHQRVPVAPL--PAITIPATSVL----- 134
Query: 128 DTEKEVTAPTIEVDEDE-MDSWLLLEPANHDNQMNSGH 164
E V T+ D+DE +DSWLLL + +N N+ +
Sbjct: 135 -AEAVVATATVLGDKDEEVDSWLLLSKDSDNNNNNNNN 171
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 133 (51.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWV---SAA-----CENGQA 72
C+ C++A + ++C A C SCDE+VH N +A H R+ + S A CEN A
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICENAPA 64
Query: 73 TFSCNTDAASLRLSCD 88
F C D +SL L CD
Sbjct: 65 FFYCEIDGSSLCLQCD 80
>TAIR|locus:2091082 [details] [associations]
symbol:COL9 "CONSTANS-like 9" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0007623 GO:GO:0008270 GO:GO:0003700
EMBL:AC009176 eggNOG:NOG248444 HOGENOM:HOG000116529
ProtClustDB:CLSN2684850 EMBL:AY049290 IPI:IPI00522412
RefSeq:NP_001030659.1 RefSeq:NP_001118599.1 RefSeq:NP_187422.1
RefSeq:NP_974250.1 UniGene:At.18337 STRING:Q9SSE5 PRIDE:Q9SSE5
EnsemblPlants:AT3G07650.1 EnsemblPlants:AT3G07650.2
EnsemblPlants:AT3G07650.3 EnsemblPlants:AT3G07650.4 GeneID:819956
KEGG:ath:AT3G07650 TAIR:At3g07650 InParanoid:Q9SSE5 OMA:TSHIQTE
PhylomeDB:Q9SSE5 Genevestigator:Q9SSE5 GermOnline:AT3G07650
GO:GO:0048579 Uniprot:Q9SSE5
Length = 372
Score = 118 (46.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C+ C S +YC + A C SCD VH+ N+++ H R V C AT C +
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEER 64
Query: 81 ASLRLSCD 88
SL +CD
Sbjct: 65 VSLCQNCD 72
Score = 75 (31.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 322 YASRKAYAEARPRVKGRFARKTEMDFEVDEMFSIEEY 358
YASRKA A+ R RVKGRF + E ++ D + Y
Sbjct: 337 YASRKARADVRRRVKGRFVKAGEA-YDYDPLTPTRSY 372
>TAIR|locus:2043288 [details] [associations]
symbol:AT2G47890 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009805 "coumarin biosynthetic process"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC005309 EMBL:AC006072 EMBL:BT023413 IPI:IPI00543399
PIR:G84920 RefSeq:NP_182310.1 UniGene:At.12948 STRING:O82256
EnsemblPlants:AT2G47890.1 GeneID:819401 KEGG:ath:AT2G47890
TAIR:At2g47890 eggNOG:NOG271369 HOGENOM:HOG000240051
InParanoid:O82256 OMA:CSRHARA PhylomeDB:O82256
ProtClustDB:CLSN2683730 Genevestigator:O82256 Uniprot:O82256
Length = 332
Score = 123 (48.4 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 23/78 (29%), Positives = 41/78 (52%)
Query: 11 DGYPGDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENG 70
+G+ D R C+ C ++V+ +YC A C +CD++VH N + H R + +C
Sbjct: 5 EGHQRD--RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNES 62
Query: 71 QATFSCNTDAASLRLSCD 88
++ C T+ + L +CD
Sbjct: 63 PSSLFCETERSVLCQNCD 80
Score = 66 (28.3 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 322 YASRKAYAEARPRVKGRFARKTE 344
Y SRK AE+R R++GRFA+ +
Sbjct: 309 YESRKVRAESRTRIRGRFAKAAD 331
>TAIR|locus:2164718 [details] [associations]
symbol:BBX8 "B-box domain protein 8" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005886 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB023039 EMBL:AY039957 EMBL:AY142607
IPI:IPI00527282 RefSeq:NP_199636.1 UniGene:At.7080
ProteinModelPortal:Q9LUA9 IntAct:Q9LUA9 STRING:Q9LUA9
EnsemblPlants:AT5G48250.1 GeneID:834878 KEGG:ath:AT5G48250
TAIR:At5g48250 eggNOG:NOG248444 HOGENOM:HOG000116529
InParanoid:Q9LUA9 OMA:ESACEQG PhylomeDB:Q9LUA9
ProtClustDB:CLSN2684850 Genevestigator:Q9LUA9 GermOnline:AT5G48250
Uniprot:Q9LUA9
Length = 373
Score = 119 (46.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C+ C S +YC + A C SCD VH+ N+++ H R V C A+ C+ +
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDER 64
Query: 81 ASLRLSCD 88
SL +CD
Sbjct: 65 VSLCQNCD 72
Score = 70 (29.7 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 322 YASRKAYAEARPRVKGRFARKTEMDFEVDEMFSIEEY 358
Y SRK A+ R RVKGRF + E ++ D M Y
Sbjct: 338 YVSRKERADVRRRVKGRFVKSGEA-YDYDPMSPTRSY 373
>TAIR|locus:2010504 [details] [associations]
symbol:BBX13 "B-box domain protein 13" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017
SMART:SM00336 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AC069471
HOGENOM:HOG000243233 ProtClustDB:CLSN2713949 EMBL:AY037206
EMBL:BT002681 IPI:IPI00538865 PIR:B86406 RefSeq:NP_174126.1
UniGene:At.19754 ProteinModelPortal:Q9C7E8 SMR:Q9C7E8 IntAct:Q9C7E8
STRING:Q9C7E8 PRIDE:Q9C7E8 EnsemblPlants:AT1G28050.1 GeneID:839698
KEGG:ath:AT1G28050 TAIR:At1g28050 eggNOG:NOG245106
InParanoid:Q9C7E8 OMA:SCGRYKQ PhylomeDB:Q9C7E8
Genevestigator:Q9C7E8 GermOnline:AT1G28050 Uniprot:Q9C7E8
Length = 433
Score = 110 (43.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 22/70 (31%), Positives = 31/70 (44%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C+ C + L+C A C CD++VH N ++ H R + C N + C TD
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 81 ASLRLSCDAD 90
L CD D
Sbjct: 69 LILCQECDWD 78
Score = 66 (28.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 322 YASRKAYAEARPRVKGRFARKTEMDF 347
Y SRKA A+ R RV+GRF + +E +
Sbjct: 407 YESRKARADTRLRVRGRFVKASEAPY 432
>TAIR|locus:2051104 [details] [associations]
symbol:BBX12 "B-box domain protein 12" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC002332 EMBL:BT002067 EMBL:AY128321
EMBL:BT006572 IPI:IPI00527026 IPI:IPI00539934 PIR:C84746
RefSeq:NP_850211.1 RefSeq:NP_973589.1 UniGene:At.43493
IntAct:O22800 STRING:O22800 EnsemblPlants:AT2G33500.1 GeneID:817915
KEGG:ath:AT2G33500 TAIR:At2g33500 eggNOG:NOG269245
HOGENOM:HOG000243233 InParanoid:O22800 OMA:ATHERSA PhylomeDB:O22800
ProtClustDB:CLSN2713949 Genevestigator:O22800 Uniprot:O22800
Length = 402
Score = 105 (42.0 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 21/70 (30%), Positives = 29/70 (41%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C C + L+C A C CD+ VH+ N ++ H R + C + C TD
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 81 ASLRLSCDAD 90
L CD D
Sbjct: 72 LVLCQECDWD 81
Score = 69 (29.3 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 322 YASRKAYAEARPRVKGRFARKTE 344
Y +RKA AE R RVKGRF + T+
Sbjct: 379 YETRKARAETRLRVKGRFVKATD 401
>TAIR|locus:2129860 [details] [associations]
symbol:BBX9 "B-box domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006863 "purine
nucleobase transport" evidence=RCA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:Z97338 EMBL:AL161541 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 HOGENOM:HOG000116529 IPI:IPI00529586
PIR:F71416 RefSeq:NP_193260.2 UniGene:At.54335
EnsemblPlants:AT4G15250.1 GeneID:827191 KEGG:ath:AT4G15250
TAIR:At4g15250 eggNOG:NOG321931 InParanoid:O23379 OMA:YQDCGIS
PhylomeDB:O23379 ProtClustDB:CLSN2915042 Genevestigator:O23379
GermOnline:AT4G15250 Uniprot:O23379
Length = 330
Score = 90 (36.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 18/67 (26%), Positives = 28/67 (41%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C+ C + +YC + A C +CD VH+ N ++ H R + C C +
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNEN 64
Query: 81 ASLRLSC 87
SL C
Sbjct: 65 VSLCQGC 71
Score = 79 (32.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 322 YASRKAYAEARPRVKGRFARKTEMDFEVD 350
YASRKA A+ R RVKGRF + E FE D
Sbjct: 298 YASRKARADTRKRVKGRFVKSGET-FEYD 325
>TAIR|locus:2088748 [details] [associations]
symbol:BBX10 "B-box domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AP000739 HOGENOM:HOG000116529 EMBL:AB493626 IPI:IPI00533145
RefSeq:NP_188826.1 UniGene:At.53422 EnsemblPlants:AT3G21880.1
GeneID:821743 KEGG:ath:AT3G21880 TAIR:At3g21880 eggNOG:NOG290178
InParanoid:Q9LJ44 OMA:KKTRTFG PhylomeDB:Q9LJ44
ProtClustDB:CLSN2685267 Genevestigator:Q9LJ44 Uniprot:Q9LJ44
Length = 364
Score = 98 (39.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 21 CNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAACENGQATFSCNTDA 80
C+ C + + +YC + LA C +CD VH+ N ++ H R + C + A C +
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEK 64
Query: 81 ASLRLSC 87
S C
Sbjct: 65 VSYCQGC 71
Score = 70 (29.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/20 (70%), Positives = 16/20 (80%)
Query: 322 YASRKAYAEARPRVKGRFAR 341
YASRKA A+ R RVKGRF +
Sbjct: 329 YASRKARADTRKRVKGRFVK 348
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 19 RTCNTC-KAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWV--SAACENGQATFS 75
R C+ C K + ++ YC A+ C SCD +H+ N +A HER+ + S+ E T S
Sbjct: 20 RGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSSPTETADKTTS 79
Score = 75 (31.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 300 RVAKVLXXXXXXXXXXXXXXXXYASRKAYAEARPRVKGRFARKTEM 345
R A+VL Y RK AE RPR+KGRF ++T +
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTSL 390
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 97 (39.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 19 RTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAA 66
R C++C + YC A+ C SCD VH+ N +A HER+ + A
Sbjct: 15 RACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTA 62
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 322 YASRKAYAEARPRVKGRFARKTEM 345
Y RK AE RPR+KGRF ++ +
Sbjct: 383 YEVRKLNAEKRPRMKGRFVKRASL 406
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 93 (37.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 19 RTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERM 61
R C C + YC + A+ C CDE VH+ N +A HER+
Sbjct: 26 RACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERV 68
Score = 65 (27.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 322 YASRKAYAEARPRVKGRFARKT 343
Y RK A+ RPR+KGRF R++
Sbjct: 300 YEVRKVNADKRPRMKGRFVRRS 321
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 95 (38.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 15 GDWMRTCNTCKAAVSTLYCHTHLAYFCDSCDERVHAYNSMALPHERMWVSAA 66
G R C++C + YC A+ C +CD VH+ N +A HER+ + +A
Sbjct: 11 GKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62
Score = 65 (27.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 322 YASRKAYAEARPRVKGRFARKTEM 345
Y RK AE RPR+KGRF +++ +
Sbjct: 379 YEVRKLNAEKRPRMKGRFVKRSSI 402
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 366 304 0.00098 115 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 616 (65 KB)
Total size of DFA: 240 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.88u 0.16s 22.04t Elapsed: 00:00:01
Total cpu time: 21.89u 0.16s 22.05t Elapsed: 00:00:01
Start: Thu May 9 18:24:33 2013 End: Thu May 9 18:24:34 2013