Query 017742
Match_columns 366
No_of_seqs 195 out of 732
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 03:01:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017742.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017742hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02629 powdery mildew resist 100.0 1E-114 3E-119 851.2 31.9 325 42-366 48-387 (387)
2 PF13839 PC-Esterase: GDSL/SGN 100.0 3E-50 6.5E-55 378.2 22.9 245 99-366 1-263 (263)
3 PF14416 PMR5N: PMR5 N termina 99.9 3.4E-27 7.4E-32 170.2 4.5 54 45-98 2-55 (55)
4 cd01842 SGNH_hydrolase_like_5 98.6 3.7E-07 8E-12 81.5 10.6 179 116-362 2-180 (183)
5 cd01841 NnaC_like NnaC (CMP-Ne 96.4 0.0073 1.6E-07 53.0 5.9 90 197-324 51-140 (174)
6 cd01829 SGNH_hydrolase_peri2 S 95.6 0.094 2E-06 46.9 9.8 132 197-363 59-197 (200)
7 cd01838 Isoamyl_acetate_hydrol 95.6 0.02 4.3E-07 50.8 5.1 104 197-325 63-167 (199)
8 cd01834 SGNH_hydrolase_like_2 95.1 0.13 2.8E-06 45.2 8.6 97 198-325 62-158 (191)
9 cd01820 PAF_acetylesterase_lik 94.2 0.19 4.1E-06 45.9 7.6 51 198-268 90-140 (214)
10 COG2845 Uncharacterized protei 90.8 2.3 4.9E-05 41.8 10.2 33 232-268 206-238 (354)
11 cd01827 sialate_O-acetylestera 88.9 2.9 6.3E-05 36.7 9.0 103 197-335 67-174 (188)
12 cd01822 Lysophospholipase_L1_l 76.0 17 0.00036 31.3 8.3 78 197-321 64-142 (177)
13 cd01825 SGNH_hydrolase_peri1 S 72.7 28 0.0006 30.2 8.9 92 198-325 57-148 (189)
14 cd01828 sialate_O-acetylestera 70.2 31 0.00068 29.6 8.6 87 198-325 49-135 (169)
15 cd01836 FeeA_FeeB_like SGNH_hy 69.7 34 0.00073 30.0 8.8 105 197-334 67-175 (191)
16 cd04502 SGNH_hydrolase_like_7 69.0 26 0.00057 30.2 7.9 87 197-324 50-136 (171)
17 cd01833 XynB_like SGNH_hydrola 64.1 53 0.0011 27.7 8.7 97 197-334 40-143 (157)
18 PF13472 Lipase_GDSL_2: GDSL-l 63.9 49 0.0011 27.6 8.4 95 196-325 60-154 (179)
19 cd00229 SGNH_hydrolase SGNH_hy 62.5 53 0.0012 27.0 8.3 95 196-327 64-160 (187)
20 cd04501 SGNH_hydrolase_like_4 62.0 46 0.001 28.8 8.1 91 197-325 59-149 (183)
21 cd04506 SGNH_hydrolase_YpmR_li 45.9 42 0.00091 29.7 5.2 75 234-327 101-176 (204)
22 cd01825 SGNH_hydrolase_peri1 S 45.9 8.7 0.00019 33.5 0.7 12 115-126 1-12 (189)
23 cd01844 SGNH_hydrolase_like_6 44.6 11 0.00024 33.0 1.1 30 236-267 75-104 (177)
24 cd01835 SGNH_hydrolase_like_3 44.3 11 0.00024 33.2 1.1 92 196-324 68-159 (193)
25 cd01832 SGNH_hydrolase_like_1 41.7 11 0.00024 32.8 0.7 90 197-325 67-156 (185)
26 cd01821 Rhamnogalacturan_acety 41.2 1.8E+02 0.004 25.5 8.6 92 197-324 65-156 (198)
27 PRK10528 multifunctional acyl- 39.4 17 0.00037 32.4 1.5 15 113-127 10-24 (191)
28 PF09949 DUF2183: Uncharacteri 37.7 26 0.00057 28.5 2.3 23 104-126 55-77 (100)
29 cd01827 sialate_O-acetylestera 37.2 17 0.00037 31.8 1.2 12 115-126 2-13 (188)
30 cd01831 Endoglucanase_E_like E 37.1 16 0.00035 31.6 1.0 85 198-324 56-141 (169)
31 PF00185 OTCace: Aspartate/orn 33.2 30 0.00064 30.3 2.0 24 112-136 1-24 (158)
32 PF02882 THF_DHG_CYH_C: Tetrah 31.7 45 0.00098 29.5 2.9 24 111-136 34-57 (160)
33 cd01830 XynE_like SGNH_hydrola 31.7 22 0.00048 31.8 1.0 31 234-268 101-131 (204)
34 cd01839 SGNH_arylesterase_like 30.4 24 0.00052 31.6 1.0 98 197-324 79-179 (208)
35 cd01840 SGNH_hydrolase_yrhL_li 23.6 40 0.00087 28.7 1.1 26 299-325 96-121 (150)
36 PF06462 Hyd_WA: Propeller; I 23.4 83 0.0018 20.0 2.3 20 256-275 9-29 (32)
37 PRK14805 ornithine carbamoyltr 22.9 53 0.0012 32.1 2.0 25 110-136 144-168 (302)
38 cd01844 SGNH_hydrolase_like_6 21.5 2.5E+02 0.0055 24.1 5.9 13 115-127 1-13 (177)
39 COG0621 MiaB 2-methylthioadeni 21.1 4.2E+02 0.009 27.4 8.0 47 196-269 39-85 (437)
40 PF02177 APP_N: Amyloid A4 N-t 20.7 55 0.0012 26.9 1.3 12 48-59 17-28 (102)
41 PF12026 DUF3513: Domain of un 20.4 6.7 0.00015 36.3 -4.6 15 112-126 133-147 (210)
No 1
>PLN02629 powdery mildew resistance 5
Probab=100.00 E-value=1.4e-114 Score=851.17 Aligned_cols=325 Identities=57% Similarity=1.103 Sum_probs=300.2
Q ss_pred CCCCCCcCcccceeeCCCCCCCCCCCCC-CCccccccccCCCCCCCcccceeecCCCCCCCCChHHHHHHhcCCeEEEEe
Q 017742 42 KQVSGCNLFQGRWVIDPSYPLYDSSSCP-FIDAEFDCLKYGRPDKQYLKYSWQPASCAVPRFDGGDFLRRYRGKRIMFVG 120 (366)
Q Consensus 42 ~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~l~rfd~~~fl~~LrgK~l~FVG 120 (366)
...++||+|+|+||+|+++|+|++++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+|||||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVG 127 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVG 127 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEec
Confidence 4457899999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHhhhccCCCCcccccccCcceEEEEeecCeEEEEEecCccccceeccccceEEeccccc-CCCCCccc
Q 017742 121 DSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQA-GKFWKDMD 199 (366)
Q Consensus 121 DSl~Rn~~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~-~~~~~~~D 199 (366)
|||+|||||||+|||++++|+..+....+++..+|+|++||+||+||||||||+.+.....++++||+++. ++.|+++|
T Consensus 128 DSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~D 207 (387)
T PLN02629 128 DSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDAD 207 (387)
T ss_pred cccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCC
Confidence 99999999999999999988765544456778899999999999999999999987665567999999986 78899999
Q ss_pred EEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC--
Q 017742 200 VLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR-- 277 (366)
Q Consensus 200 vlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~-- 277 (366)
||||||||||.+.+..++++|++.|++++++|++.+|||+||+||++||++++++.+|+|||||+||+||+||+||..
T Consensus 208 vlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~ 287 (387)
T PLN02629 208 VLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAS 287 (387)
T ss_pred EEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCC
Confidence 999999999999988888999999999999999999999999999999999998889999999999999999999942
Q ss_pred --CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccccccCCCCCcCCC---------CCCCCcee
Q 017742 278 --KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGK---------HSGTDCSH 346 (366)
Q Consensus 278 --gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y~~~---------~~~~DC~H 346 (366)
+|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|++. ..++||+|
T Consensus 288 ~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~H 367 (387)
T PLN02629 288 TTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSH 367 (387)
T ss_pred CCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCccc
Confidence 2579999999998877777777888999999999999999999999999999999999742 34689999
Q ss_pred eccCCchhHHHHHHHHHHhC
Q 017742 347 WCLPGLPDTWNQLLYAALTM 366 (366)
Q Consensus 347 WClPG~~DtWN~lL~~~L~~ 366 (366)
|||||||||||||||++|+.
T Consensus 368 WCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 368 WCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred ccCCCCCccHHHHHHHHHhC
Confidence 99999999999999999974
No 2
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=100.00 E-value=3e-50 Score=378.25 Aligned_cols=245 Identities=38% Similarity=0.709 Sum_probs=188.4
Q ss_pred CCCCChHHHHHHhcCCeEEEEechhhHHHHHHHHHhhhccCC-----CCcccccccCcceEEEEeecCeEEEEEecCccc
Q 017742 99 VPRFDGGDFLRRYRGKRIMFVGDSLSLNMWESLSCMIHASVP-----NAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLV 173 (366)
Q Consensus 99 l~rfd~~~fl~~LrgK~l~FVGDSl~Rn~~~SLlClL~~~~~-----~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv 173 (366)
+++||+.++|++||||+|+|||||++||+|+||+|+|.+..+ +........+....+.++++|+|++|+|+|||+
T Consensus 1 ~~~~d~~~cL~~lr~k~i~fiGDS~~Rq~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~p~l~ 80 (263)
T PF13839_consen 1 LPRFDARECLQRLRNKRIVFIGDSTTRQQYESLVCLLGPEVPSWQESPHSGIEFPNHRNFRYNFPDYNVTLSFYWDPFLV 80 (263)
T ss_pred CChhhHHHHHHHccCCEEEEEechhhHHHHHHHHHHHhccccccccccccccccccCCceEEeecCCCeEEEEecccccc
Confidence 589999999999999999999999999999999999998766 222212223455677889999999999999999
Q ss_pred cceeccccceEEecccc-c-CCCCC----cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHH
Q 017742 174 DIVKQKVGRVLTLNSIQ-A-GKFWK----DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARW 247 (366)
Q Consensus 174 ~~~~~~~~~~l~lD~i~-~-~~~~~----~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~w 247 (366)
.. +|.++ . ...|. .+||||||+|+||.+......+ +++ .+++..++|+.++++++++
T Consensus 81 ~~----------l~~~~~~~~~~~~~~~~~pdvvV~nsG~W~~~~~~~~~~-----~~~--~~~~~~~~y~~~l~~~~~~ 143 (263)
T PF13839_consen 81 DQ----------LDSIDEEIANNWPTSGARPDVVVINSGLWYLRRSGFIEW-----GDN--KEINPLEAYRNRLRTLADW 143 (263)
T ss_pred cc----------ccccchhhhccccccccCCCEEEEEcchhhhhcchhccc-----CCC--cCcchHHHHHHHHHHHHHH
Confidence 64 33322 1 23333 7999999999999987532222 222 4567899999999999999
Q ss_pred HHhcCCCCC--ceEEEEecCCCCCCCCccCcCCCCCCCccccCCCCCCCC-CCchHHHHHHHHHhhCCCCeeEeec-ccc
Q 017742 248 VDLNVDPSQ--TKVFFQGISPTHYTGKEWNSRKKNCLGELEPLSGSTYPG-GAPPAASVVNKVLSSINKPVYLLDI-TTL 323 (366)
Q Consensus 248 v~~~~~~~~--~~Vf~Rt~sP~Hf~~g~W~~~gg~C~~~t~P~~~~~~~~-~~~~~~~iv~~~~~~~~~~v~lLDi-t~l 323 (366)
+.+.+++.+ ++||||+++|+|+++++|+ +||+|. +........ ....+++++.+++ ....++++||| |.|
T Consensus 144 ~~~~~~~~~~~~~v~~r~~~P~h~~~~~~~-~gg~c~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ldi~~~~ 217 (263)
T PF13839_consen 144 VRRLLDRSKPPTRVFWRTTSPVHFEGGDWN-SGGSCN----PPRREEITNEQIDELNEALREAL-KKNSRVHLLDIFTML 217 (263)
T ss_pred HHhhhccccccceEEEEecCCccccccccc-cCCCcC----cccccCCCHHHHHHHHHHHHHHh-hcCCCceeeeecchh
Confidence 998776544 9999999999999999999 599995 111111111 0122233333333 24579999999 999
Q ss_pred ccccc-cCCCCCcCCC--CCCCCceeeccCCchhHHHHHHHHHHhC
Q 017742 324 SQLRK-DAHPSTYSGK--HSGTDCSHWCLPGLPDTWNQLLYAALTM 366 (366)
Q Consensus 324 s~~R~-DaHp~~y~~~--~~~~DC~HWClPG~~DtWN~lL~~~L~~ 366 (366)
+.+|+ ||||++|+.. ....||+|||+|||+|+||+||+++|..
T Consensus 218 ~~~r~~d~H~~~~~~~~~~~~~Dc~Hw~~p~v~d~~~~lL~~~lcn 263 (263)
T PF13839_consen 218 SSFRPDDAHPGIYRNQWPRQPQDCLHWCLPGVIDTWNELLLNLLCN 263 (263)
T ss_pred hhccccccCcccccCCCCCCCCCCcCcCCCcHHHHHHHHHHHHhhC
Confidence 99999 9999999876 3359999999999999999999999863
No 3
>PF14416 PMR5N: PMR5 N terminal Domain
Probab=99.93 E-value=3.4e-27 Score=170.23 Aligned_cols=54 Identities=61% Similarity=1.400 Sum_probs=52.7
Q ss_pred CCCcCcccceeeCCCCCCCCCCCCCCCccccccccCCCCCCCcccceeecCCCC
Q 017742 45 SGCNLFQGRWVIDPSYPLYDSSSCPFIDAEFDCLKYGRPDKQYLKYSWQPASCA 98 (366)
Q Consensus 45 ~~Cd~~~G~WV~d~~~plY~~~~Cp~i~~~~~C~~nGRpd~~y~~wrWqP~~C~ 98 (366)
+.||+|+|+||+|+++|+|++++||||++++||++|||||++|++|||||++|+
T Consensus 2 ~~Cd~~~G~WV~D~~~PlY~~~~Cp~i~~~~nC~~nGRpD~~y~~wRWqP~~Cd 55 (55)
T PF14416_consen 2 KRCDYFDGRWVPDPSYPLYTNSTCPFIDEGFNCQKNGRPDSDYLKWRWQPRGCD 55 (55)
T ss_pred CccCcccCEEEeCCCCCccCCCCCCcCCCccchhhcCCCCCccceeeecCCCCC
Confidence 579999999999999999999999999999999999999999999999999996
No 4
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.60 E-value=3.7e-07 Score=81.48 Aligned_cols=179 Identities=16% Similarity=0.227 Sum_probs=100.1
Q ss_pred EEEEechhhHHHHHHHHHhhhccCCCCcccccccCcceEEEEeecCeEEEEEecCccccceeccccceEEecccccCCCC
Q 017742 116 IMFVGDSLSLNMWESLSCMIHASVPNAKTSFVRKETLSSVSFEEYGVTLLLYRTPYLVDIVKQKVGRVLTLNSIQAGKFW 195 (366)
Q Consensus 116 l~FVGDSl~Rn~~~SLlClL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~i~~~~~~ 195 (366)
++|+|||+.|..|.-|+|||... . .-+.+.++. + .+. +..-|..-++..
T Consensus 2 v~~lgds~~ravykdlv~l~q~~-----~-~l~~~~lr~-k-~e~----------------------~f~~D~ll~gg~- 50 (183)
T cd01842 2 VVILGDSIQRAVYKDLVLLLQKD-----S-LLSSSQLKA-K-GEL----------------------SFENDVLLEGGR- 50 (183)
T ss_pred EEEEccHHHHHHHHHHHHHhcCC-----c-cccHHHHhh-h-hhh----------------------hhccceeecCCc-
Confidence 78999999999999999999621 0 000011100 0 000 011111112233
Q ss_pred CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccC
Q 017742 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN 275 (366)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~ 275 (366)
.||||||+|.|=.. +|.. ...+.|++.|.++..-+++-+ |+++++||.|++|.= ++.
T Consensus 51 --~DVIi~Ns~LWDl~--------ry~~--------~~~~~Y~~NL~~Lf~rLk~~l-p~~allIW~tt~Pv~-~~~--- 107 (183)
T cd01842 51 --LDLVIMNSCLWDLS--------RYQR--------NSMKTYRENLERLFSKLDSVL-PIECLIVWNTAMPVA-EEI--- 107 (183)
T ss_pred --eeEEEEecceeccc--------ccCC--------CCHHHHHHHHHHHHHHHHhhC-CCccEEEEecCCCCC-cCC---
Confidence 49999999999432 2211 136899999999998766555 568999999999962 211
Q ss_pred cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccccccCCCCCcCCCCCCCCceeeccCCchhH
Q 017742 276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTYSGKHSGTDCSHWCLPGLPDT 355 (366)
Q Consensus 276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y~~~~~~~DC~HWClPG~~Dt 355 (366)
+||-=..+-++ ..++......+.|.+.++++++ ..+.++|+..-. -...-|. ..|=+||=. ...+.
T Consensus 108 -~ggfl~~~~~~-~~~~lr~dv~eaN~~A~~va~~--~~~dVlDLh~~f-r~~~~~~--------~~DgVHwn~-~a~r~ 173 (183)
T cd01842 108 -KGGFLLPELHD-LSKSLRYDVLEGNFYSATLAKC--YGFDVLDLHYHF-RHAMQHR--------VRDGVHWNY-VAHRR 173 (183)
T ss_pred -cCceecccccc-ccccchhHHHHHHHHHHHHHHH--cCceeeehHHHH-HhHHhhc--------CCCCcCcCH-HHHHH
Confidence 23311000000 1111112224556777777766 578999998877 2223332 367888853 33444
Q ss_pred HHHHHHH
Q 017742 356 WNQLLYA 362 (366)
Q Consensus 356 WN~lL~~ 362 (366)
=+.+|++
T Consensus 174 ls~lll~ 180 (183)
T cd01842 174 LSNLLLA 180 (183)
T ss_pred HHHHHHH
Confidence 3444433
No 5
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=96.37 E-value=0.0073 Score=52.97 Aligned_cols=90 Identities=9% Similarity=0.017 Sum_probs=53.1
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|.-=.... .-.+.|++.++++++-+.+. .++++||+-+..|......
T Consensus 51 ~pd~v~i~~G~ND~~~~------------------~~~~~~~~~~~~l~~~~~~~--~p~~~vi~~~~~p~~~~~~---- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE------------------VSSNQFIKWYRDIIEQIREE--FPNTKIYLLSVLPVLEEDE---- 106 (174)
T ss_pred CCCEEEEEeccccCCCC------------------CCHHHHHHHHHHHHHHHHHH--CCCCEEEEEeeCCcCcccc----
Confidence 37999998875421110 02456777777777766543 2467899999887653210
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 324 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls 324 (366)
+. ... .......+++++++.++ .++.++|++.+.
T Consensus 107 ----~~----~~~----~~~~~~~n~~l~~~a~~--~~~~~id~~~~~ 140 (174)
T cd01841 107 ----IK----TRS----NTRIQRLNDAIKELAPE--LGVTFIDLNDVL 140 (174)
T ss_pred ----cc----cCC----HHHHHHHHHHHHHHHHH--CCCEEEEcHHHH
Confidence 00 000 00113456777777666 459999999875
No 6
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.64 E-value=0.094 Score=46.87 Aligned_cols=132 Identities=10% Similarity=0.015 Sum_probs=71.2
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|..=..... ....+... ..-...+.|+..++.+.+.+.+ .+++|++-+..|.+.. ..+
T Consensus 59 ~pd~vii~~G~ND~~~~~-~~~~~~~~-----~~~~~~~~~~~~l~~lv~~~~~----~~~~vili~~pp~~~~--~~~- 125 (200)
T cd01829 59 KPDVVVVFLGANDRQDIR-DGDGYLKF-----GSPEWEEEYRQRIDELLNVARA----KGVPVIWVGLPAMRSP--KLS- 125 (200)
T ss_pred CCCEEEEEecCCCCcccc-CCCceeec-----CChhHHHHHHHHHHHHHHHHHh----CCCcEEEEcCCCCCCh--hHh-
Confidence 379999999988542110 00000000 0113467888888888876643 3567999888776421 000
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccccccCCCCCc----CCC---CCCCCceeecc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQLRKDAHPSTY----SGK---HSGTDCSHWCL 349 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~R~DaHp~~y----~~~---~~~~DC~HWCl 349 (366)
......+++++++.++ .++.++|++++..-. ++=+... .+. ....|.+|..-
T Consensus 126 ------------------~~~~~~~~~~~~~a~~--~~~~~id~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~DgvH~~~ 184 (200)
T cd01829 126 ------------------ADMVYLNSLYREEVAK--AGGEFVDVWDGFVDE-NGRFTYSGTDVNGKKVRLRTNDGIHFTA 184 (200)
T ss_pred ------------------HHHHHHHHHHHHHHHH--cCCEEEEhhHhhcCC-CCCeeeeccCCCCcEEEeecCCCceECH
Confidence 0113456777777766 469999999875322 2111100 000 12369999776
Q ss_pred CCchhHHHHHHHHH
Q 017742 350 PGLPDTWNQLLYAA 363 (366)
Q Consensus 350 PG~~DtWN~lL~~~ 363 (366)
.|- ..|-+.+...
T Consensus 185 ~G~-~~~a~~i~~~ 197 (200)
T cd01829 185 AGG-RKLAFYVEKL 197 (200)
T ss_pred HHH-HHHHHHHHHH
Confidence 654 3333333333
No 7
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=95.59 E-value=0.02 Score=50.79 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=56.2
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|.-=.... +.. .. .-.+.|+..++.+++.+.+. .++++||+-|..|.... .|..
T Consensus 63 ~pd~vii~~G~ND~~~~----------~~~--~~-~~~~~~~~~~~~~i~~~~~~--~~~~~ii~~t~~~~~~~--~~~~ 125 (199)
T cd01838 63 QPDLVTIFFGANDAALP----------GQP--QH-VPLDEYKENLRKIVSHLKSL--SPKTKVILITPPPVDEE--AWEK 125 (199)
T ss_pred CceEEEEEecCccccCC----------CCC--Cc-ccHHHHHHHHHHHHHHHHhh--CCCCeEEEeCCCCCCHH--HHhh
Confidence 58999999987532211 000 00 12578888888888876553 24678999988775422 1210
Q ss_pred CCCCCCCccccCCCCCCCC-CCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 277 RKKNCLGELEPLSGSTYPG-GAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~-~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
.+. .+........ .....+++++++.++ .++.++|++..+.
T Consensus 126 ---~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~iD~~~~~~ 167 (199)
T cd01838 126 ---SLE---DGGSQPGRTNELLKQYAEACVEVAEE--LGVPVIDLWTAMQ 167 (199)
T ss_pred ---hhc---cccCCccccHHHHHHHHHHHHHHHHH--hCCcEEEHHHHHH
Confidence 010 0000000000 012344566666666 4699999987654
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=95.10 E-value=0.13 Score=45.20 Aligned_cols=97 Identities=15% Similarity=0.077 Sum_probs=51.0
Q ss_pred ccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017742 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR 277 (366)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~ 277 (366)
+|+|++..|.-=..... . .....+.|+..|+++++.+.+. .+++.|++-+..|. ....++
T Consensus 62 ~d~v~l~~G~ND~~~~~------~--------~~~~~~~~~~~l~~~v~~~~~~--~~~~~ii~~~p~~~-~~~~~~--- 121 (191)
T cd01834 62 PDVVSIMFGINDSFRGF------D--------DPVGLEKFKTNLRRLIDRLKNK--ESAPRIVLVSPIAY-EANEDP--- 121 (191)
T ss_pred CCEEEEEeecchHhhcc------c--------ccccHHHHHHHHHHHHHHHHcc--cCCCcEEEECCccc-CCCCCC---
Confidence 79999988865332110 0 0112567888888888876532 34566777654332 111110
Q ss_pred CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 278 KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 278 gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
. |... .........+++++++.++ .++.++|++....
T Consensus 122 -----~---~~~~-~~~~~~~~~n~~l~~~a~~--~~~~~iD~~~~~~ 158 (191)
T cd01834 122 -----L---PDGA-EYNANLAAYADAVRELAAE--NGVAFVDLFTPMK 158 (191)
T ss_pred -----C---CChH-HHHHHHHHHHHHHHHHHHH--cCCeEEecHHHHH
Confidence 0 1000 0000012345666666665 5799999998764
No 9
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=94.16 E-value=0.19 Score=45.89 Aligned_cols=51 Identities=12% Similarity=0.097 Sum_probs=31.2
Q ss_pred ccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCC
Q 017742 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTH 268 (366)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~H 268 (366)
+|+|||..|.==... + . -.+.|...++.+++.+.+. .+++.|++-+..|..
T Consensus 90 pd~VvI~~G~ND~~~-----------~------~-~~~~~~~~l~~ii~~l~~~--~P~~~Iil~~~~p~~ 140 (214)
T cd01820 90 PKVVVLLIGTNNIGH-----------T------T-TAEEIAEGILAIVEEIREK--LPNAKILLLGLLPRG 140 (214)
T ss_pred CCEEEEEecccccCC-----------C------C-CHHHHHHHHHHHHHHHHHH--CCCCeEEEEeccCCC
Confidence 799999887541100 0 0 1345666777777666543 246778888887754
No 10
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.81 E-value=2.3 Score=41.81 Aligned_cols=33 Identities=12% Similarity=0.296 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCC
Q 017742 232 DRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTH 268 (366)
Q Consensus 232 ~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~H 268 (366)
+....|++-+..+++.+.. .+..|+|-.+.|--
T Consensus 206 ~W~~eY~kRvd~~l~ia~~----~~~~V~WvGmP~~r 238 (354)
T COG2845 206 EWTKEYEKRVDAILKIAHT----HKVPVLWVGMPPFR 238 (354)
T ss_pred HHHHHHHHHHHHHHHHhcc----cCCcEEEeeCCCcc
Confidence 6788999999988886543 46679999997533
No 11
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=88.95 E-value=2.9 Score=36.70 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=58.6
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+|||+.|.==.... .. ...+.|+..++.+++.+.+. .+++++|+-+..|..... +.
T Consensus 67 ~pd~Vii~~G~ND~~~~----------~~------~~~~~~~~~l~~li~~i~~~--~~~~~iil~t~~p~~~~~--~~- 125 (188)
T cd01827 67 NPNIVIIKLGTNDAKPQ----------NW------KYKDDFKKDYETMIDSFQAL--PSKPKIYICYPIPAYYGD--GG- 125 (188)
T ss_pred CCCEEEEEcccCCCCCC----------CC------ccHHHHHHHHHHHHHHHHHH--CCCCeEEEEeCCcccccC--CC-
Confidence 37999999986421110 00 12457788888888876553 346788888877754321 10
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccccc----cccC-CCCCc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQL----RKDA-HPSTY 335 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~~----R~Da-Hp~~y 335 (366)
+...... ....++.++++.++ .++.++|+...+.. -+|+ ||+..
T Consensus 126 ----------~~~~~~~---~~~~~~~~~~~a~~--~~~~~vD~~~~~~~~~~~~~Dg~Hpn~~ 174 (188)
T cd01827 126 ----------FINDNII---KKEIQPMIDKIAKK--LNLKLIDLHTPLKGKPELVPDWVHPNEK 174 (188)
T ss_pred ----------ccchHHH---HHHHHHHHHHHHHH--cCCcEEEccccccCCccccCCCCCcCHH
Confidence 1000000 02235566666665 57888998876543 3477 88754
No 12
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=75.96 E-value=17 Score=31.26 Aligned_cols=78 Identities=13% Similarity=0.118 Sum_probs=45.5
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecC-CCCCCCCccC
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGIS-PTHYTGKEWN 275 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~s-P~Hf~~g~W~ 275 (366)
.+|+|||..|.-=... + .-.+.|++.++++++-+.+. +++|++-+.. |.++. ..|
T Consensus 64 ~pd~v~i~~G~ND~~~-----------~-------~~~~~~~~~l~~li~~~~~~----~~~vil~~~~~~~~~~-~~~- 119 (177)
T cd01822 64 KPDLVILELGGNDGLR-----------G-------IPPDQTRANLRQMIETAQAR----GAPVLLVGMQAPPNYG-PRY- 119 (177)
T ss_pred CCCEEEEeccCccccc-----------C-------CCHHHHHHHHHHHHHHHHHC----CCeEEEEecCCCCccc-hHH-
Confidence 4799999998541100 0 01356778888877766542 4567777653 43321 001
Q ss_pred cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecc
Q 017742 276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDIT 321 (366)
Q Consensus 276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit 321 (366)
....+++++++.++ .++.++|.+
T Consensus 120 ---------------------~~~~~~~~~~~a~~--~~~~~~d~~ 142 (177)
T cd01822 120 ---------------------TRRFAAIYPELAEE--YGVPLVPFF 142 (177)
T ss_pred ---------------------HHHHHHHHHHHHHH--cCCcEechH
Confidence 13456777777766 457777763
No 13
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=72.70 E-value=28 Score=30.23 Aligned_cols=92 Identities=8% Similarity=0.057 Sum_probs=55.2
Q ss_pred ccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017742 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR 277 (366)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~ 277 (366)
+|+||+..|.==.... + --.+.|+..++++++.+.+. .++++|++.+..|.-+..
T Consensus 57 pd~Vii~~G~ND~~~~----------~-------~~~~~~~~~~~~li~~i~~~--~~~~~iv~~~~~~~~~~~------ 111 (189)
T cd01825 57 PDLVILSYGTNEAFNK----------Q-------LNASEYRQQLREFIKRLRQI--LPNASILLVGPPDSLQKT------ 111 (189)
T ss_pred CCEEEEECCCcccccC----------C-------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEEcCCchhccC------
Confidence 7999999885421100 0 01467888888888877653 247789998887653321
Q ss_pred CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 278 KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 278 gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
.+ +..+. .......++.++++.++ .++.++|+...+.
T Consensus 112 ~~-~~~~~--------~~~~~~~~~~~~~~a~~--~~v~~vd~~~~~~ 148 (189)
T cd01825 112 GA-GRWRT--------PPGLDAVIAAQRRVAKE--EGIAFWDLYAAMG 148 (189)
T ss_pred CC-CCccc--------CCcHHHHHHHHHHHHHH--cCCeEEeHHHHhC
Confidence 11 10000 01123456677777777 4599999987764
No 14
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=70.20 E-value=31 Score=29.55 Aligned_cols=87 Identities=11% Similarity=-0.018 Sum_probs=54.1
Q ss_pred ccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017742 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR 277 (366)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~ 277 (366)
+|+||+..|.-=... + .-.+.|++.+.++++.+.+. .++++|++-+..|..-..
T Consensus 49 pd~vvl~~G~ND~~~-----------~-------~~~~~~~~~l~~li~~~~~~--~~~~~vi~~~~~p~~~~~------ 102 (169)
T cd01828 49 PKAIFIMIGINDLAQ-----------G-------TSDEDIVANYRTILEKLRKH--FPNIKIVVQSILPVGELK------ 102 (169)
T ss_pred CCEEEEEeeccCCCC-----------C-------CCHHHHHHHHHHHHHHHHHH--CCCCeEEEEecCCcCccC------
Confidence 799999998432110 0 01467888888888877653 246789999988765110
Q ss_pred CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 278 KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 278 gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
... .......+++++++.++ .++.++|+++...
T Consensus 103 -~~~------------~~~~~~~n~~l~~~a~~--~~~~~id~~~~~~ 135 (169)
T cd01828 103 -SIP------------NEQIEELNRQLAQLAQQ--EGVTFLDLWAVFT 135 (169)
T ss_pred -cCC------------HHHHHHHHHHHHHHHHH--CCCEEEechhhhc
Confidence 000 00113456777777765 6899999987653
No 15
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=69.70 E-value=34 Score=29.95 Aligned_cols=105 Identities=16% Similarity=0.102 Sum_probs=57.0
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+|||+.|.==.... ...+.|++.++++++-+.+. .+.++||+-+..|.....
T Consensus 67 ~pd~Vii~~G~ND~~~~------------------~~~~~~~~~l~~li~~i~~~--~~~~~iiv~~~p~~~~~~----- 121 (191)
T cd01836 67 RFDVAVISIGVNDVTHL------------------TSIARWRKQLAELVDALRAK--FPGARVVVTAVPPLGRFP----- 121 (191)
T ss_pred CCCEEEEEecccCcCCC------------------CCHHHHHHHHHHHHHHHHhh--CCCCEEEEECCCCcccCC-----
Confidence 47999999875421110 12457788888888877653 246789998876543210
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc---ccccc-CCCCC
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS---QLRKD-AHPST 334 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls---~~R~D-aHp~~ 334 (366)
.. ..+... .........+++++++.++. .++.++|++... .+-.| -||+.
T Consensus 122 ---~~---~~~~~~-~~~~~~~~~n~~~~~~a~~~-~~~~~id~~~~~~~~~~~~DglHpn~ 175 (191)
T cd01836 122 ---AL---PQPLRW-LLGRRARLLNRALERLASEA-PRVTLLPATGPLFPALFASDGFHPSA 175 (191)
T ss_pred ---CC---cHHHHH-HHHHHHHHHHHHHHHHHhcC-CCeEEEecCCccchhhccCCCCCCCh
Confidence 00 000000 00000023345555555542 379999999874 34445 67664
No 16
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=69.03 E-value=26 Score=30.15 Aligned_cols=87 Identities=8% Similarity=0.127 Sum_probs=49.5
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|.==. .. + .+ .+.|+..++++++-+.+.. +++++++-+..|.-. .|.
T Consensus 50 ~p~~vvi~~G~ND~----------~~-~------~~-~~~~~~~~~~lv~~i~~~~--~~~~iil~~~~p~~~---~~~- 105 (171)
T cd04502 50 QPRRVVLYAGDNDL----------AS-G------RT-PEEVLRDFRELVNRIRAKL--PDTPIAIISIKPSPA---RWA- 105 (171)
T ss_pred CCCEEEEEEecCcc----------cC-C------CC-HHHHHHHHHHHHHHHHHHC--CCCcEEEEEecCCCc---chh-
Confidence 37999998875311 10 0 11 4667888888887776543 356788887655321 111
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 324 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls 324 (366)
.. ......++.++++.++ ..++.++|++...
T Consensus 106 -------~~---------~~~~~~n~~~~~~a~~-~~~v~~vD~~~~~ 136 (171)
T cd04502 106 -------LR---------PKIRRFNALLKELAET-RPNLTYIDVASPM 136 (171)
T ss_pred -------hH---------HHHHHHHHHHHHHHhc-CCCeEEEECcHHH
Confidence 00 0013355666666543 2479999988643
No 17
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=64.15 E-value=53 Score=27.66 Aligned_cols=97 Identities=13% Similarity=0.125 Sum_probs=57.6
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||++.|.-=.. .. .-.+.|+..++++.+.+.+. .+++++++-+..|.-...
T Consensus 40 ~pd~vvi~~G~ND~~----------~~--------~~~~~~~~~~~~~i~~i~~~--~p~~~ii~~~~~p~~~~~----- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLV----------LN--------RDPDTAPDRLRALIDQMRAA--NPDVKIIVATLIPTTDAS----- 94 (157)
T ss_pred CCCEEEEeccCcccc----------cC--------CCHHHHHHHHHHHHHHHHHh--CCCeEEEEEeCCCCCCcc-----
Confidence 379999999864211 10 12467788888888777553 346778887765532210
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhC---CCCeeEeecccccc---ccc-cCCCCC
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSI---NKPVYLLDITTLSQ---LRK-DAHPST 334 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~---~~~v~lLDit~ls~---~R~-DaHp~~ 334 (366)
. .......++.++++.++. +.++.++|+.+... +.+ .-||+.
T Consensus 95 ----~------------~~~~~~~n~~l~~~~~~~~~~~~~v~~vd~~~~~~~~~~~~Dg~Hpn~ 143 (157)
T cd01833 95 ----G------------NARIAEYNAAIPGVVADLRTAGSPVVLVDMSTGYTTADDLYDGLHPND 143 (157)
T ss_pred ----h------------hHHHHHHHHHHHHHHHHHhcCCCCEEEEecCCCCCCcccccCCCCCch
Confidence 0 001134566666666543 25799999998863 444 447764
No 18
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=63.88 E-value=49 Score=27.57 Aligned_cols=95 Identities=8% Similarity=0.053 Sum_probs=54.3
Q ss_pred CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccC
Q 017742 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN 275 (366)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~ 275 (366)
..+|+|||+.|.-=... +.. .....+.|+.+|+++++.+.. .+.|++-+..|.......+.
T Consensus 60 ~~~d~vvi~~G~ND~~~-----------~~~---~~~~~~~~~~~l~~~i~~~~~-----~~~vi~~~~~~~~~~~~~~~ 120 (179)
T PF13472_consen 60 PKPDLVVISFGTNDVLN-----------GDE---NDTSPEQYEQNLRRIIEQLRP-----HGPVILVSPPPRGPDPRDPK 120 (179)
T ss_dssp TTCSEEEEE--HHHHCT-----------CTT---CHHHHHHHHHHHHHHHHHHHT-----TSEEEEEE-SCSSSSTTTTH
T ss_pred CCCCEEEEEcccccccc-----------ccc---ccccHHHHHHHHHHHHHhhcc-----cCcEEEecCCCccccccccc
Confidence 34899999998643221 100 113467788888888776532 33889989888775432210
Q ss_pred cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
. .+. .......+++++++.++ .++.++|+.....
T Consensus 121 ~---~~~-----------~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~ 154 (179)
T PF13472_consen 121 Q---DYL-----------NRRIDRYNQAIRELAKK--YGVPFIDLFDAFD 154 (179)
T ss_dssp T---TCH-----------HHHHHHHHHHHHHHHHH--CTEEEEEHHHHHB
T ss_pred c---hhh-----------hhhHHHHHHHHHHHHHH--cCCEEEECHHHHc
Confidence 0 000 00013456677777766 4899999999855
No 19
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=62.54 E-value=53 Score=26.98 Aligned_cols=95 Identities=14% Similarity=0.083 Sum_probs=52.4
Q ss_pred CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccC
Q 017742 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN 275 (366)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~ 275 (366)
..+|+||+..|..-..... ......+...++.+.+.+.+ ..++++|++-+..|.....+
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------------~~~~~~~~~~~~~~i~~~~~--~~~~~~vv~~~~~~~~~~~~--- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------------DTSIDEFKANLEELLDALRE--RAPGAKVILITPPPPPPREG--- 122 (187)
T ss_pred CCCCEEEEEeccccccccc----------------ccCHHHHHHHHHHHHHHHHH--HCCCCcEEEEeCCCCCCCch---
Confidence 3489999999988643210 01234455555555555443 23466787777766443210
Q ss_pred cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCC--CCeeEeecccccccc
Q 017742 276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSIN--KPVYLLDITTLSQLR 327 (366)
Q Consensus 276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~--~~v~lLDit~ls~~R 327 (366)
.........++.++++.+..+ ..+.++|+.......
T Consensus 123 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 160 (187)
T cd00229 123 ----------------LLGRALPRYNEAIKAVAAENPAPSGVDLVDLAALLGDE 160 (187)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHHcCCCcceEEEEhhhhhCCC
Confidence 000001234566677666632 148899999876543
No 20
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=61.99 E-value=46 Score=28.84 Aligned_cols=91 Identities=11% Similarity=0.069 Sum_probs=52.5
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|..=... + ...+.|.+.++.+++.+.+ ...++|+-+..|.--. .|..
T Consensus 59 ~~d~v~i~~G~ND~~~-----------~-------~~~~~~~~~~~~li~~~~~----~~~~~il~~~~p~~~~--~~~~ 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIV-----------N-------TSLEMIKDNIRSMVELAEA----NGIKVILASPLPVDDY--PWKP 114 (183)
T ss_pred CCCEEEEEeccCcccc-----------C-------CCHHHHHHHHHHHHHHHHH----CCCcEEEEeCCCcCcc--ccch
Confidence 3799999998762111 0 1245678888888887654 2456788777764311 1210
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
..+.+ .......++.++++.++ .++.++|+++...
T Consensus 115 ~~~~~------------~~~~~~~n~~~~~~a~~--~~v~~vd~~~~~~ 149 (183)
T cd04501 115 QWLRP------------ANKLKSLNRWLKDYARE--NGLLFLDFYSPLL 149 (183)
T ss_pred hhcch------------HHHHHHHHHHHHHHHHH--cCCCEEechhhhh
Confidence 00011 00113456677777766 4699999998754
No 21
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=45.88 E-value=42 Score=29.72 Aligned_cols=75 Identities=15% Similarity=0.136 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecC-CCCCCCCccCcCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCC
Q 017742 234 LEAFYKGMSTWARWVDLNVDPSQTKVFFQGIS-PTHYTGKEWNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSIN 312 (366)
Q Consensus 234 ~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~s-P~Hf~~g~W~~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~ 312 (366)
.+.|++.|+++++-+.+. .++++|++-+.. |.-. +. |.... ........+++++++.++.
T Consensus 101 ~~~~~~~l~~~i~~ir~~--~p~~~Ivv~~~~~p~~~----~~-----------~~~~~-~~~~~~~~n~~~~~~a~~~- 161 (204)
T cd04506 101 EETYQNNLKKIFKEIRKL--NPDAPIFLVGLYNPFYV----YF-----------PNITE-INDIVNDWNEASQKLASQY- 161 (204)
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEEecCCcccc----cc-----------chHHH-HHHHHHHHHHHHHHHHHhC-
Confidence 567888898888877652 245677776642 3110 10 00000 0000123445566665542
Q ss_pred CCeeEeecccccccc
Q 017742 313 KPVYLLDITTLSQLR 327 (366)
Q Consensus 313 ~~v~lLDit~ls~~R 327 (366)
.++.++|+.+++.-.
T Consensus 162 ~~v~~vd~~~~~~~~ 176 (204)
T cd04506 162 KNAYFVPIFDLFSDG 176 (204)
T ss_pred CCeEEEehHHhhcCC
Confidence 349999998876644
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=45.87 E-value=8.7 Score=33.48 Aligned_cols=12 Identities=42% Similarity=0.451 Sum_probs=10.5
Q ss_pred eEEEEechhhHH
Q 017742 115 RIMFVGDSLSLN 126 (366)
Q Consensus 115 ~l~FVGDSl~Rn 126 (366)
||+|+|||++..
T Consensus 1 ~iv~~GDS~t~g 12 (189)
T cd01825 1 RIAQLGDSHIAG 12 (189)
T ss_pred CeeEecCccccc
Confidence 689999999974
No 23
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=44.61 E-value=11 Score=32.96 Aligned_cols=30 Identities=3% Similarity=-0.006 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEecCCC
Q 017742 236 AFYKGMSTWARWVDLNVDPSQTKVFFQGISPT 267 (366)
Q Consensus 236 a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~ 267 (366)
.|+..++.+++.+.+.. +++.|++-+..|.
T Consensus 75 ~~~~~~~~~i~~i~~~~--p~~~iil~~~~~~ 104 (177)
T cd01844 75 MVRERLGPLVKGLRETH--PDTPILLVSPRYC 104 (177)
T ss_pred HHHHHHHHHHHHHHHHC--cCCCEEEEecCCC
Confidence 56777777777776533 4677888776554
No 24
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=44.28 E-value=11 Score=33.24 Aligned_cols=92 Identities=17% Similarity=0.100 Sum_probs=50.0
Q ss_pred CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccC
Q 017742 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWN 275 (366)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~ 275 (366)
..+|+||+..|.==.... .+.. . ....+.|+..++.+.+.+.+ ++.|++-+..|.--.
T Consensus 68 ~~pd~V~i~~G~ND~~~~---------~~~~--~-~~~~~~~~~~~~~ii~~~~~-----~~~vi~~~~~p~~~~----- 125 (193)
T cd01835 68 NVPNRLVLSVGLNDTARG---------GRKR--P-QLSARAFLFGLNQLLEEAKR-----LVPVLVVGPTPVDEA----- 125 (193)
T ss_pred CCCCEEEEEecCcccccc---------cCcc--c-ccCHHHHHHHHHHHHHHHhc-----CCcEEEEeCCCcccc-----
Confidence 358999999986422111 0000 0 01246788888887775432 456888776653210
Q ss_pred cCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc
Q 017742 276 SRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 324 (366)
Q Consensus 276 ~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls 324 (366)
..|..+. .....++.++++.++ .++.++|+++..
T Consensus 126 ---------~~~~~~~----~~~~~n~~~~~~a~~--~~~~~vd~~~~~ 159 (193)
T cd01835 126 ---------KMPYSNR----RIARLETAFAEVCLR--RDVPFLDTFTPL 159 (193)
T ss_pred ---------ccchhhH----HHHHHHHHHHHHHHH--cCCCeEeCccch
Confidence 0111000 012345667777666 478899998654
No 25
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=41.67 E-value=11 Score=32.78 Aligned_cols=90 Identities=10% Similarity=0.069 Sum_probs=51.0
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|.==. ... ..-.+.|++.++.+++.+. .+++.||+-+..|.- + +
T Consensus 67 ~~d~vii~~G~ND~----------~~~-------~~~~~~~~~~~~~~i~~i~----~~~~~vil~~~~~~~--~--~-- 119 (185)
T cd01832 67 RPDLVTLLAGGNDI----------LRP-------GTDPDTYRADLEEAVRRLR----AAGARVVVFTIPDPA--V--L-- 119 (185)
T ss_pred CCCEEEEecccccc----------ccC-------CCCHHHHHHHHHHHHHHHH----hCCCEEEEecCCCcc--c--c--
Confidence 57999999874311 000 0124678888888888765 235678887765541 0 1
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
.|+.... .......+++++++.++ .++.++|++.+..
T Consensus 120 ---------~~~~~~~-~~~~~~~n~~l~~~a~~--~~v~~vd~~~~~~ 156 (185)
T cd01832 120 ---------EPFRRRV-RARLAAYNAVIRAVAAR--YGAVHVDLWEHPE 156 (185)
T ss_pred ---------chhHHHH-HHHHHHHHHHHHHHHHH--cCCEEEecccCcc
Confidence 1111000 00013345667777665 4799999988764
No 26
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=41.17 E-value=1.8e+02 Score=25.47 Aligned_cols=92 Identities=7% Similarity=0.032 Sum_probs=54.0
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNS 276 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~ 276 (366)
.+|+||+..|..=..... +. .-...+.|+..|+++++-+.+ .+..+++-|..|.- .|..
T Consensus 65 ~pdlVii~~G~ND~~~~~------~~-------~~~~~~~~~~nl~~ii~~~~~----~~~~~il~tp~~~~----~~~~ 123 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKD------PE-------YTEPYTTYKEYLRRYIAEARA----KGATPILVTPVTRR----TFDE 123 (198)
T ss_pred CCCEEEEECCCCCCCCCC------CC-------CCCcHHHHHHHHHHHHHHHHH----CCCeEEEECCcccc----ccCC
Confidence 589999999976432210 00 001256789999988886654 24567776655421 1221
Q ss_pred CCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc
Q 017742 277 RKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 324 (366)
Q Consensus 277 ~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls 324 (366)
++. ........+++++++.++ .++.++|++++.
T Consensus 124 -~~~------------~~~~~~~~~~~~~~~a~~--~~~~~vD~~~~~ 156 (198)
T cd01821 124 -GGK------------VEDTLGDYPAAMRELAAE--EGVPLIDLNAAS 156 (198)
T ss_pred -CCc------------ccccchhHHHHHHHHHHH--hCCCEEecHHHH
Confidence 000 011124567888888877 468889988764
No 27
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=39.36 E-value=17 Score=32.45 Aligned_cols=15 Identities=33% Similarity=0.620 Sum_probs=13.0
Q ss_pred CCeEEEEechhhHHH
Q 017742 113 GKRIMFVGDSLSLNM 127 (366)
Q Consensus 113 gK~l~FVGDSl~Rn~ 127 (366)
+.+|+|+|||++...
T Consensus 10 ~~~iv~~GDSit~G~ 24 (191)
T PRK10528 10 ADTLLILGDSLSAGY 24 (191)
T ss_pred CCEEEEEeCchhhcC
Confidence 678999999999773
No 28
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=37.71 E-value=26 Score=28.49 Aligned_cols=23 Identities=22% Similarity=0.447 Sum_probs=17.7
Q ss_pred hHHHHHHhcCCeEEEEechhhHH
Q 017742 104 GGDFLRRYRGKRIMFVGDSLSLN 126 (366)
Q Consensus 104 ~~~fl~~LrgK~l~FVGDSl~Rn 126 (366)
-+++++..-++++++||||--.-
T Consensus 55 i~~i~~~fP~~kfiLIGDsgq~D 77 (100)
T PF09949_consen 55 IERILRDFPERKFILIGDSGQHD 77 (100)
T ss_pred HHHHHHHCCCCcEEEEeeCCCcC
Confidence 35566777799999999996553
No 29
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=37.24 E-value=17 Score=31.76 Aligned_cols=12 Identities=25% Similarity=0.573 Sum_probs=10.2
Q ss_pred eEEEEechhhHH
Q 017742 115 RIMFVGDSLSLN 126 (366)
Q Consensus 115 ~l~FVGDSl~Rn 126 (366)
+|+|+|||++..
T Consensus 2 ~i~~~GDSit~G 13 (188)
T cd01827 2 KVACVGNSITEG 13 (188)
T ss_pred eEEEEecccccc
Confidence 699999999664
No 30
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=37.05 E-value=16 Score=31.62 Aligned_cols=85 Identities=12% Similarity=-0.021 Sum_probs=45.6
Q ss_pred ccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCCCCCccCcC
Q 017742 198 MDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHYTGKEWNSR 277 (366)
Q Consensus 198 ~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf~~g~W~~~ 277 (366)
+|+|||+.|.==.... . ..-.+.|+.+++.+++-+.+. .+++++++-+..+..- +.
T Consensus 56 pd~vii~~G~ND~~~~----------~------~~~~~~~~~~~~~li~~i~~~--~p~~~i~~~~~~~~~~----~~-- 111 (169)
T cd01831 56 PDLVVINLGTNDFSTG----------N------NPPGEDFTNAYVEFIEELRKR--YPDAPIVLMLGPMLFG----PY-- 111 (169)
T ss_pred CCEEEEECCcCCCCCC----------C------CCCHHHHHHHHHHHHHHHHHH--CCCCeEEEEecCcccc----cc--
Confidence 7999999986432111 0 012456667777776666542 2466676654322110 00
Q ss_pred CCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCC-CCeeEeeccccc
Q 017742 278 KKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSIN-KPVYLLDITTLS 324 (366)
Q Consensus 278 gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~-~~v~lLDit~ls 324 (366)
.+ ....+.+++++++.+ .++.++|.....
T Consensus 112 ------~~------------~~~~~~~~~~~~~~~~~~v~~id~~~~~ 141 (169)
T cd01831 112 ------GT------------EEEIKRVAEAFKDQKSKKVHYFDTPGIL 141 (169)
T ss_pred ------cc------------HHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 00 233456666665532 469999987643
No 31
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=33.20 E-value=30 Score=30.30 Aligned_cols=24 Identities=29% Similarity=0.422 Sum_probs=19.0
Q ss_pred cCCeEEEEechhhHHHHHHHHHhhh
Q 017742 112 RGKRIMFVGDSLSLNMWESLSCMIH 136 (366)
Q Consensus 112 rgK~l~FVGDSl~Rn~~~SLlClL~ 136 (366)
.|++|+|||| ..-|.-.||+.++.
T Consensus 1 ~gl~i~~vGD-~~~rv~~Sl~~~~~ 24 (158)
T PF00185_consen 1 KGLKIAYVGD-GHNRVAHSLIELLA 24 (158)
T ss_dssp TTEEEEEESS-TTSHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCChHHHHHHHHHH
Confidence 4899999999 53456889998874
No 32
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=31.74 E-value=45 Score=29.51 Aligned_cols=24 Identities=25% Similarity=0.508 Sum_probs=15.2
Q ss_pred hcCCeEEEEechhhHHHHHHHHHhhh
Q 017742 111 YRGKRIMFVGDSLSLNMWESLSCMIH 136 (366)
Q Consensus 111 LrgK~l~FVGDSl~Rn~~~SLlClL~ 136 (366)
++||+++.||-|..=. .-|.+||.
T Consensus 34 l~Gk~v~VvGrs~~VG--~Pla~lL~ 57 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVG--KPLAMLLL 57 (160)
T ss_dssp TTT-EEEEE-TTTTTH--HHHHHHHH
T ss_pred CCCCEEEEECCcCCCC--hHHHHHHH
Confidence 4699999999995433 23667774
No 33
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=31.65 E-value=22 Score=31.82 Aligned_cols=31 Identities=23% Similarity=0.228 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCC
Q 017742 234 LEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTH 268 (366)
Q Consensus 234 ~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~H 268 (366)
.+.|+..++++++.+.+ .+.+|++-+..|..
T Consensus 101 ~~~~~~~l~~ii~~~~~----~~~~vil~t~~P~~ 131 (204)
T cd01830 101 AEELIAGYRQLIRRAHA----RGIKVIGATITPFE 131 (204)
T ss_pred HHHHHHHHHHHHHHHHH----CCCeEEEecCCCCC
Confidence 56788888888886654 24679998888754
No 34
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.38 E-value=24 Score=31.55 Aligned_cols=98 Identities=8% Similarity=0.038 Sum_probs=52.3
Q ss_pred cccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCC---CCCceEEEEecCCCCCCCCc
Q 017742 197 DMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVD---PSQTKVFFQGISPTHYTGKE 273 (366)
Q Consensus 197 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~---~~~~~Vf~Rt~sP~Hf~~g~ 273 (366)
.+|+||+..|.==.... + .. -.+.|++.++++++-+.+... .+.++|++-+..|. .. ..
T Consensus 79 ~pd~vii~lGtND~~~~-------~--------~~-~~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~-~~-~~ 140 (208)
T cd01839 79 PLDLVIIMLGTNDLKSY-------F--------NL-SAAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPI-RT-PK 140 (208)
T ss_pred CCCEEEEeccccccccc-------c--------CC-CHHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCcc-Cc-cc
Confidence 48999998875311000 0 00 146788888888887765321 14677888777664 11 01
Q ss_pred cCcCCCCCCCccccCCCCCCCCCCchHHHHHHHHHhhCCCCeeEeeccccc
Q 017742 274 WNSRKKNCLGELEPLSGSTYPGGAPPAASVVNKVLSSINKPVYLLDITTLS 324 (366)
Q Consensus 274 W~~~gg~C~~~t~P~~~~~~~~~~~~~~~iv~~~~~~~~~~v~lLDit~ls 324 (366)
+. ...+..+. .......+++++++.++ .++.++|+..+.
T Consensus 141 ~~--~~~~~~~~--------~~~~~~~~~~~~~~a~~--~~~~~iD~~~~~ 179 (208)
T cd01839 141 GS--LAGKFAGA--------EEKSKGLADAYRALAEE--LGCHFFDAGSVG 179 (208)
T ss_pred cc--hhhhhccH--------HHHHHHHHHHHHHHHHH--hCCCEEcHHHHh
Confidence 11 00010000 00012345677777766 468899987654
No 35
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=23.62 E-value=40 Score=28.68 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=18.5
Q ss_pred hHHHHHHHHHhhCCCCeeEeecccccc
Q 017742 299 PAASVVNKVLSSINKPVYLLDITTLSQ 325 (366)
Q Consensus 299 ~~~~iv~~~~~~~~~~v~lLDit~ls~ 325 (366)
+.+++++++.++. .++.++|......
T Consensus 96 ~~n~~~~~~a~~~-~~v~~id~~~~~~ 121 (150)
T cd01840 96 DVNAYLLDAAKKY-KNVTIIDWYKAAK 121 (150)
T ss_pred HHHHHHHHHHHHC-CCcEEecHHHHhc
Confidence 4567777777663 3799999876654
No 36
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=23.42 E-value=83 Score=19.97 Aligned_cols=20 Identities=35% Similarity=0.851 Sum_probs=16.5
Q ss_pred CceEEEEe-cCCCCCCCCccC
Q 017742 256 QTKVFFQG-ISPTHYTGKEWN 275 (366)
Q Consensus 256 ~~~Vf~Rt-~sP~Hf~~g~W~ 275 (366)
+..+++|+ .+|...+|..|.
T Consensus 9 ~G~v~~R~Gis~~~P~G~~W~ 29 (32)
T PF06462_consen 9 DGSVYFRTGISPSNPEGTSWE 29 (32)
T ss_pred CCCEEEECcCCCCCCCCCCcE
Confidence 56899998 888888887774
No 37
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=22.89 E-value=53 Score=32.06 Aligned_cols=25 Identities=24% Similarity=0.256 Sum_probs=20.1
Q ss_pred HhcCCeEEEEechhhHHHHHHHHHhhh
Q 017742 110 RYRGKRIMFVGDSLSLNMWESLSCMIH 136 (366)
Q Consensus 110 ~LrgK~l~FVGDSl~Rn~~~SLlClL~ 136 (366)
.++|++|+||||. .|...|++.++.
T Consensus 144 ~l~g~kva~vGD~--~~v~~S~~~~~~ 168 (302)
T PRK14805 144 DVSKVKLAYVGDG--NNVTHSLMYGAA 168 (302)
T ss_pred CcCCcEEEEEcCC--CccHHHHHHHHH
Confidence 3679999999994 467789888774
No 38
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.49 E-value=2.5e+02 Score=24.14 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=11.4
Q ss_pred eEEEEechhhHHH
Q 017742 115 RIMFVGDSLSLNM 127 (366)
Q Consensus 115 ~l~FVGDSl~Rn~ 127 (366)
+|+|+|||++...
T Consensus 1 ~iv~~GDSit~G~ 13 (177)
T cd01844 1 PWVFYGTSISQGA 13 (177)
T ss_pred CEEEEeCchhcCc
Confidence 5899999999874
No 39
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.13 E-value=4.2e+02 Score=27.44 Aligned_cols=47 Identities=21% Similarity=0.217 Sum_probs=29.3
Q ss_pred CcccEEEEcccccccccCCCCCcceeeCCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecCCCCC
Q 017742 196 KDMDVLIFNSWHWWTHTGKAQPWDYIQDGQTLLKDMDRLEAFYKGMSTWARWVDLNVDPSQTKVFFQGISPTHY 269 (366)
Q Consensus 196 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~a~r~al~t~~~wv~~~~~~~~~~Vf~Rt~sP~Hf 269 (366)
..+||+|||| |.+. ..|=++++.++.++.+.+ ++.+|++-+.-+++.
T Consensus 39 ~eADvviiNT-------------C~V~-----------~~a~~k~~~~i~~~~~~~---p~~~iiVtGC~aq~~ 85 (437)
T COG0621 39 EEADVVIINT-------------CAVR-----------EKAEQKVRSAIGELKKLK---PDAKIIVTGCLAQAE 85 (437)
T ss_pred ccCCEEEEec-------------Ceee-----------ehHHHHHHHHHHHHHHhC---CCCEEEEeCCccccC
Confidence 3589999999 4332 235556666666655443 466777766655553
No 40
>PF02177 APP_N: Amyloid A4 N-terminal heparin-binding; InterPro: IPR015849 Amyloid-beta precursor protein (APP, or A4) is associated with Alzheimer's disease (AD), because one of its breakdown products, amyloid-beta (A-beta), aggregates to form amyloid or senile plaques [, ]. Mutations in APP or in proteins that process APP have been linked with early-onset, familial AD. Individuals with Down's syndrome carry an extra copy of chromosome 21, which contains the APP gene, and almost invariably develop amyloid plaques and Alzheimer's symptoms. APP is important for the neurogenesis and neuronal regeneration, either through the intact protein, or through its many breakdown products []. APP consists of a large N-terminal extracellular region containing heparin-binding and copper-binding sites, a short hydrophobic transmembrane domain, and a short C-terminal intracellular domain. The N-terminal region is similar in structure to cysteine-rich growth factors and appears to function as a cell surface receptor, contributing to neurite growth, neuronal adhesion, axonogenesis and cell mobility []. APP acts as a kinesin I membrane receptor to mediate the axonal transport of beta-secretase and presenilin 1. The N-terminal domain can regulate neurite outgrowth through its binding to heparin and collagen I and IV, which are components of the extracellular matrix. APP is also coupled to apoptosis-inducing pathways, and is involved in copper homeostasis/oxidative stress through copper ion reduction, where copper-metallated APP induces neuronal death []. The C-terminal intracellular domain appears to be involved in transcription regulation through protein-protein interactions. APP can promote transcription activation through binding to APBB1/Tip60, and may bind to the adaptor protein FE65 to transactivate a wide variety of different promoters. APP can be processed by different sets of enzymes: In the non-amyloidogenic (non-plaque-forming) pathway, APP is cleaved by alpha-secretase to yield a soluble N-terminal sAPP-alpha (neuroprotective) and a membrane-bound CTF-alpha. CTF-alpha is broken-down by presenilin-containing gamma-secretase to yield soluble p3 and membrane-bound AICD (nuclear signalling). In the amyloidogenic pathway (plaque-forming), APP is broken down by beta-secretase to yield soluble sAPP-beta and membrane-bound CTF-beta. CTF-beta is broken down by gamma-secretase to yield soluble amyloid-beta and membrane-bound AICD. Amyloid-beta is required for neuronal function, but can aggregate to form amyloid plaques that seem to disrupt brain cells by clogging points of cell-cell contact. This entry represents a heparin-binding domain found at the N-terminal of the extracellular domain, which is itself found at the N-terminal of amyloidogenic glycoproteins such as amyloid-beta precursor protein (APP, or A4). The core of the heparin-binding domain has an unusual disulphide-rich fold, consisting of a beta-x-alpha-beta-loop-beta topology []. More information about these protein can be found at Protein of the Month: Amyloid-beta Precursor Protein [].; GO: 0005488 binding, 0016021 integral to membrane; PDB: 3KTM_E 1MWP_A 2FKL_A 1OWT_A.
Probab=20.70 E-value=55 Score=26.90 Aligned_cols=12 Identities=67% Similarity=1.129 Sum_probs=8.8
Q ss_pred cCcccceeeCCC
Q 017742 48 NLFQGRWVIDPS 59 (366)
Q Consensus 48 d~~~G~WV~d~~ 59 (366)
|+-+|+|++|++
T Consensus 17 ~~~~G~W~~Dp~ 28 (102)
T PF02177_consen 17 NLQTGRWEPDPS 28 (102)
T ss_dssp -TTTSSEEE-TT
T ss_pred cccCCceeeCCC
Confidence 467899999986
No 41
>PF12026 DUF3513: Domain of unknown function (DUF3513); InterPro: IPR021901 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is typically between 192 to 218 amino acids in length. This domain is found associated with PF00018 from PFAM, PF08824 from PFAM. This domain has a conserved QPP sequence motif. ; PDB: 3T6G_D 1X27_N.
Probab=20.36 E-value=6.7 Score=36.33 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=12.8
Q ss_pred cCCeEEEEechhhHH
Q 017742 112 RGKRIMFVGDSLSLN 126 (366)
Q Consensus 112 rgK~l~FVGDSl~Rn 126 (366)
-+.+++||||++.|+
T Consensus 133 ~ahkLVfiGDTl~r~ 147 (210)
T PF12026_consen 133 SAHKLVFIGDTLCRE 147 (210)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred EeeeeeeeccHHHHH
Confidence 367899999999986
Done!