BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017744
(366 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 320 bits (819), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 207/294 (70%), Gaps = 15/294 (5%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
KK +RVY+DGCFDLMH+GHANALRQA+ LGD LVVGV +DEEI NKGPPV++ +ER
Sbjct: 7 KKPIRVYVDGCFDLMHFGHANALRQARELGDILVVGVHTDEEIAKNKGPPVMNEQERYKA 66
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V KW DEV APY +TE++++ L D+ +HG+D + DG D Y KK G++
Sbjct: 67 VRACKWADEVAEGAPYTLTEEYLDSL----NCDFCVHGEDISVGADGKDVYEGIKKSGKF 122
Query: 183 KQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAI-------QSKDAHLSQ 235
+ IKRTEGVS+T++VGR+L +D N + PL + QS LS
Sbjct: 123 RFIKRTEGVSTTELVGRMLLCTKDHL----QNVSGEQTSPLGGVNPNVLHKQSPYTSLSH 178
Query: 236 FLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI 295
FLPT+R+IVQFS + P PN +++Y+DG FDLFH GH E LK+AR LGD+L+VG++ D++
Sbjct: 179 FLPTTRKIVQFSEGRSPKPNDKIIYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRV 238
Query: 296 VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
V E +GS PIM+LHER LSVL+CRYVDEV+IGAP+ VTKDMI + +I +VVHG
Sbjct: 239 VHEQKGSNFPIMNLHERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHG 292
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 95/140 (67%), Gaps = 8/140 (5%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSG 125
+YMDG FDL H GH AL+QA+ALGD L+VGV D + KG P++++ ER+ V
Sbjct: 202 IYMDGGFDLFHVGHTEALKQARALGDYLIVGVHDDRVVHEQKGSNFPIMNLHERVLSVLS 261
Query: 126 LKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLL-PDG-TDAYALAKKVGRYK 183
++VDEV+ AP+++T+ ++ L I+ ++HGDD +L P+G D Y L +++G YK
Sbjct: 262 CRYVDEVVIGAPFSVTKDMIDSLH----INVVVHGDDQVVLGPEGGVDPYKLPRELGIYK 317
Query: 184 QIKRTEGVSSTDIVGRILSS 203
++K TEG+++T+IV RI+ +
Sbjct: 318 EVKHTEGLTATEIVKRIIDN 337
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 280 bits (715), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 206/302 (68%), Gaps = 24/302 (7%)
Query: 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERL 120
G ++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER
Sbjct: 18 GGRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERY 77
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
+V +KWVDEV+ APY T + +++ + D+ +HG+D L DG D Y K+ G
Sbjct: 78 KMVQAIKWVDEVVPAAPYVTTLETLDK----YNCDFCVHGNDITLTVDGRDTYEEVKQAG 133
Query: 181 RYKQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA--SLP--RDPLRAIQSK 229
RY++ KRT+GVS+TD+VGR+L SS E + ++ ++ P R+P +
Sbjct: 134 RYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGV--- 190
Query: 230 DAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLL 287
SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L+K +L + +++
Sbjct: 191 ----SQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYII 246
Query: 288 VGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVV 347
G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT ++++ F + LV
Sbjct: 247 AGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVC 306
Query: 348 HG 349
HG
Sbjct: 307 HG 308
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 11/148 (7%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGP--PVLSMEERLALV 123
+Y+ G FDL H GH + L + L + ++ G+ D+E+ KG P++++ ER V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPD--GTDAYALAKKVGR 181
++V EV+ APYA+T + ++ K+D + HG ++PD G+D Y K+ G
Sbjct: 276 LACRYVSEVVIGAPYAVTAELLSHF----KVDLVCHGKTE-IIPDRDGSDPYQEPKRRGI 330
Query: 182 YKQIKRTEGVSSTDIVGRILSSMEDTKA 209
++QI +++ IV RI+++ + +A
Sbjct: 331 FRQIDSGSNLTTDLIVQRIITNRLEYEA 358
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 142/316 (44%), Positives = 206/316 (65%), Gaps = 28/316 (8%)
Query: 58 KKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSME 117
K G ++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + E
Sbjct: 15 KGPGDQRIVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQE 74
Query: 118 ERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK 177
ER +V +KWVDEV+ APY T + +++ H D+ +HG+D L DG D Y K
Sbjct: 75 ERYKMVQAIKWVDEVVPAAPYVTTLETLDK----HNCDFCVHGNDITLTVDGRDTYEEVK 130
Query: 178 KVGRYKQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA-SLPRDPLRA---- 225
+ GRY++ KRT+GVS+TD+VGR+L SS E + ++ ++ P P A
Sbjct: 131 QAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTL 190
Query: 226 ----------IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEI 275
QS +SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+
Sbjct: 191 SSEVSSQCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDF 250
Query: 276 LKKARQLGD--FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEV 333
L++ +L +++ G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ V
Sbjct: 251 LQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSV 310
Query: 334 TKDMITTFNICLVVHG 349
T +++ F + LV HG
Sbjct: 311 TAELLNHFKVDLVCHG 326
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGP--PVLSMEERLALV 123
+Y+ G FDL H GH + L++ L ++ G+ D+E+ KG P++++ ER V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPD--GTDAYALAKKVGR 181
++V EV+ APY++T + +N K+D + HG ++PD G+D Y K+ G
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHF----KVDLVCHGKTE-IVPDRDGSDPYQEPKRRGI 348
Query: 182 YKQIKRTEGVSSTDIVGRILSS 203
+ QI +++ IV RI+ +
Sbjct: 349 FYQIDSGSDLTTDLIVQRIIKN 370
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/311 (45%), Positives = 204/311 (65%), Gaps = 28/311 (9%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER +
Sbjct: 20 QRTVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V +KWVDEV+ APY T + +++ H D+ +HG+D L DG D Y K+ GRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETLDK----HNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 183 KQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA-SLPRDPLRA--------- 225
++ KRT+GVS+TD+VGR+L SS E + ++ ++ P P A
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSEVS 195
Query: 226 -----IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKAR 280
QS +SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L++
Sbjct: 196 SQCPGGQSPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVH 255
Query: 281 QLGD--FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMI 338
+L +++ G++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT +++
Sbjct: 256 KLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELL 315
Query: 339 TTFNICLVVHG 349
F + LV HG
Sbjct: 316 NHFKVDLVCHG 326
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGP--PVLSMEERLALV 123
+Y+ G FDL H GH + L++ L ++ G+ D+E+ KG P++++ ER V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPD--GTDAYALAKKVGR 181
++V EV+ APY++T + +N K+D + HG ++PD G+D Y K+ G
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHF----KVDLVCHGKTE-IVPDRDGSDPYEEPKRRGI 348
Query: 182 YKQIKRTEGVSSTDIVGRILSSMEDTKA 209
+ QI +++ IV RI+ + + +A
Sbjct: 349 FCQIDSGSDLTTDLIVQRIIKNRLEYEA 376
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/300 (46%), Positives = 203/300 (67%), Gaps = 24/300 (8%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
++ VRV+ DGC+D++HYGH+N LRQA+A+GD L+VGV +DEEI +KGPPV + EER +
Sbjct: 20 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDHLIVGVHTDEEIAKHKGPPVFTQEERYKM 79
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
V +KWVDEV+ APY T + +++ + D+ +HG+D L DG D Y K+ GRY
Sbjct: 80 VQAIKWVDEVVPAAPYVTTLETLDK----YNCDFCVHGNDITLTVDGRDTYEEVKQAGRY 135
Query: 183 KQIKRTEGVSSTDIVGRIL-------SSMEDTKACEDHNNA--SLP--RDPLRAIQSKDA 231
++ KRT+GVS+TD+VGR+L SS E + ++ ++ P R+P +
Sbjct: 136 RECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGV----- 190
Query: 232 HLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVG 289
SQFL TS++I+QF++ K P P V+Y+ GAFDLFH GHV+ L+K L + +++ G
Sbjct: 191 --SQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAG 248
Query: 290 IYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
++ DQ V+ ++G +PIM+LHER+LSVLACRYV EV+IGAP+ VT +++ F + LV HG
Sbjct: 249 LHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYSVTAELLDHFKVDLVCHG 308
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 11/148 (7%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGP--PVLSMEERLALV 123
+Y+ G FDL H GH + L + L + ++ G+ D+E+ KG P++++ ER V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPD--GTDAYALAKKVGR 181
++V EV+ APY++T + ++ K+D + HG ++PD G+D Y K+ G
Sbjct: 276 LACRYVSEVVIGAPYSVTAELLDHF----KVDLVCHGKTE-VVPDKDGSDPYEEPKRRGI 330
Query: 182 YKQIKRTEGVSSTDIVGRILSSMEDTKA 209
+ Q+ +++ IV RI+ + + +A
Sbjct: 331 FCQVDSGNDLTTDLIVQRIIKNRLEYEA 358
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 172/280 (61%), Gaps = 22/280 (7%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126
+V+ DGCFD+ HYGHANALRQ+KALGD L+ GV S I KG PV+ EER +V G
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKALGDYLIAGVHSSLSINQEKGLPVMEDEERYEVVEGC 67
Query: 127 KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK 186
++VDEV+ +AP+ +T+ M E+ + + HG+D L G D+Y +++G +++++
Sbjct: 68 RYVDEVVRDAPF-VTQTSM---IKEYGVSIVAHGNDIVLDSSGQDSYCQVRRMGIFREVE 123
Query: 187 RTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSKDAHLSQFLPTSRRIVQF 246
RT G+S+T+IVGR++ +++ + D N +D D LS F+ +
Sbjct: 124 RTFGISTTEIVGRMM--LKNRGSWLDGENGESSKDS----GYHDRLLSLFMSS------- 170
Query: 247 SNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPI 306
G +VV++DG FDLFHAGHV L+ AR +GD+L+VGI+ D+ E+ SY P+
Sbjct: 171 ---MGREKRGKVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTKEYTRSY-PV 226
Query: 307 MHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLV 346
+ ER L+++ACRYVDE+++ +P+ V + I I +V
Sbjct: 227 LSTKERMLTLMACRYVDEIVV-SPYLVGSEFIKRHGIDVV 265
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
V+ DG FD+FH GH L++++ LGD+L+ G+++ +++ +G P+M ER V
Sbjct: 9 VWADGCFDMFHYGHANALRQSKALGDYLIAGVHSSLSINQEKGL--PVMEDEERYEVVEG 66
Query: 319 CRYVDEVIIGAPWEVTKDMITTFNICLVVHGT 350
CRYVDEV+ AP+ MI + + +V HG
Sbjct: 67 CRYVDEVVRDAPFVTQTSMIKEYGVSIVAHGN 98
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 30/158 (18%)
Query: 61 GKKKRVRV-YMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKGPPVLSMEE 118
G++KR +V +MDG FDL H GH +LR A+ +GD L+VG+ DE + PVLS +E
Sbjct: 172 GREKRGKVVFMDGNFDLFHAGHVASLRIARGMGDYLIVGIHDDETTKEYTRSYPVLSTKE 231
Query: 119 RLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK 178
R+ + ++VDE++ +PY + +F+ R H ID + D +K
Sbjct: 232 RMLTLMACRYVDEIVV-SPYLVGSEFIKR----HGIDVVAPSFD-------------SKD 273
Query: 179 VGRYKQIK----------RTEGVSSTDIVGRILSSMED 206
+ RY IK R +S+ IV RI+S+ +D
Sbjct: 274 LSRYDGIKDVVEHSYAENRFNYLSAEHIVNRIISNYQD 311
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 158/283 (55%), Gaps = 38/283 (13%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL 126
R+++DGC D HYGH+NA+ QAK LG+ LV+G+ SDEEI NKGPPV+++EER +
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGPPVMTLEERCLSANTC 69
Query: 127 KWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIK 186
KWVDEV+ +APY ++M R + Y++HGDD +G D Y AK +Y ++K
Sbjct: 70 KWVDEVVPSAPYVFDLEWMRR----YGCQYVVHGDDISTDANGDDCYRFAKAADQYLEVK 125
Query: 187 RTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSKDAHLSQFLPTSRRIVQF 246
RTEGVS+T+++ R+LSS+ + P+ + S+ L +F S + F
Sbjct: 126 RTEGVSTTELLDRLLSSVP----------LEIYSTPVSVLSSQIDLLRRFATDSDGLTPF 175
Query: 247 S-----NCKGP------------GPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLL 287
+ N + P P ++YIDG +DLF H+ L+ ++ G ++
Sbjct: 176 TDVFIYNTEKPETLISGTTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIM 235
Query: 288 VGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP 330
GI+ D+ E P+++L ER L++L C+Y+ +++G P
Sbjct: 236 AGIFADEKCFE-----KPMLNLLERILNLLQCKYISSILVGPP 273
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
+++DG D FH GH + +A+QLG+ L++GI++D+ ++ ++G P+M L ER LS
Sbjct: 11 LWLDGCMDFFHYGHSNAILQAKQLGETLVIGIHSDEEITLNKGP--PVMTLEERCLSANT 68
Query: 319 CRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
C++VDEV+ AP+ + + + VVHG
Sbjct: 69 CKWVDEVVPSAPYVFDLEWMRRYGCQYVVHG 99
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 21/271 (7%)
Query: 67 RVYMDGCFDLMHYGHANALRQAKAL----GDELVVGVVSDEEIIANKGPPVLSMEERLAL 122
+V++DGCFD H+GHA A+ QA+ +L GV +DE+I NKG PV++ ER
Sbjct: 9 KVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERYEH 68
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRY 182
+W EV+ APY +M++ ++ Y++HGDD + +G D Y L K++GR+
Sbjct: 69 TRSNRWCSEVVEAAPYVTDPNWMDK----YQCQYVVHGDDITIDANGEDCYKLVKEMGRF 124
Query: 183 KQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSK-DAHLSQFLPTSR 241
K +KRT GVS+T+I+ RIL+ D+ + Q H F
Sbjct: 125 KVVKRTYGVSTTEIIHRILTKKSLPPTHPDYYPTTQELSFYSVAQDAVSKHCYVFQRDLD 184
Query: 242 RIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKAR---QLGDFLLVGIYTDQIVSE 298
++ K + VY+DG FDLFH G ++ L+K + L+VGI T S
Sbjct: 185 NVLVNGGYKFDAEDC--VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGITTSDYSS- 241
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGA 329
IM + ER LSVL+C+YVD VII A
Sbjct: 242 ------TIMTMKERVLSVLSCKYVDAVIIDA 266
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL----GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSL 314
V+IDG FD H GH + +AR+ L G++TD+ + ++G+ P+M+ ER
Sbjct: 10 VWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGT--PVMNSSERYE 67
Query: 315 SVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
+ R+ EV+ AP+ + + + VVHG
Sbjct: 68 HTRSNRWCSEVVEAAPYVTDPNWMDKYQCQYVVHG 102
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 68 VYMDGCFDLMHYGHANALRQAKA---LGDELVVGVVSDEEIIANKGPPVLSMEERLALVS 124
VY+DG FDL H G + LR+ K +L+VG+ + ++ +++M+ER+ V
Sbjct: 200 VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGITT-----SDYSSTIMTMKERVLSVL 254
Query: 125 GLKWVDEVIANAPYAITEQF 144
K+VD VI +A Q+
Sbjct: 255 SCKYVDAVIIDADATSMSQY 274
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GH L QAK + L+VG+ +D+ KG V++ +ER +
Sbjct: 102 VRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAEAL 161
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
KWVDEV+ NAP+ IT +F+ EHKID++ H D P D D Y KKVG++
Sbjct: 162 RHCKWVDEVLENAPWVITPEFLE----EHKIDFVAHDDIPYASDDSGDIYLPVKKVGKFI 217
Query: 184 QIKRTEGVSSTDIVGRIL 201
KRTEGVS++D++ RI+
Sbjct: 218 PTKRTEGVSTSDLITRII 235
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH GH+ L++A+++ L+VG+ DQ+ HR +M+ ER+ ++
Sbjct: 104 VYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLT--HRLKGLTVMNDKERAEAL 161
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
C++VDEV+ APW +T + + I V H +
Sbjct: 162 RHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDI 196
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 24/163 (14%)
Query: 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGPPVLSMEERLA 121
K V +Y DG +D++H GH L QAK L + L+VGV SD E KG V ++EER
Sbjct: 90 KNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERTE 149
Query: 122 LVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDP------------------ 163
+ ++WVDE+I+ P+ +T +F+ + +KIDY+ H D P
Sbjct: 150 TLKHIRWVDEIISPCPWVVTPEFLEK----YKIDYVAHDDIPYANNQKKKKKKKSKGKSF 205
Query: 164 CLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMED 206
+ D YA K+ G++K +RTEGVS+TD++ RIL + ED
Sbjct: 206 SFDEENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYED 248
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 250 KGPGPNAR--VVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHP 305
KG N++ V+Y DG +D+ H GH++ L++A++L L+VG+ +D +G
Sbjct: 83 KGSIKNSKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQV-- 140
Query: 306 IMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNT 356
+ L ER+ ++ R+VDE+I PW VT + + + I V H + N
Sbjct: 141 VQTLEERTETLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANN 191
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +L+VG+ +D++ +G +M+ +ER +V
Sbjct: 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAV 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
CRYVDEV+ APW +T + + I V H +
Sbjct: 137 QHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDI 171
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L +L+VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H +
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDI 171
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L L+VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKDAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L +L+VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H +
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDI 171
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 6/141 (4%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDEL--VVGVVSDEEIIANKGPPVLSMEERL 120
++ VRVY DG FDL H GHA AL QAK L +VGV SDE KG V++ ER
Sbjct: 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERY 133
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
V ++VDEV+ NAP+ +T +F+ EH+ID++ H D P D Y K+ G
Sbjct: 134 DAVQHCRYVDEVVRNAPWTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAG 189
Query: 181 RYKQIKRTEGVSSTDIVGRIL 201
+ +RTEG+S++DI+ RI+
Sbjct: 190 MFAPTQRTEGISTSDIITRIV 210
Score = 75.9 bits (185), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 242 RIVQFSNCKG-PGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSE 298
R+ C+G P VY DG FDLFH+GH L +A+ L + +VG+ +D++
Sbjct: 61 RVTMEEACRGTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHN 120
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
+G +M+ +ER +V CRYVDEV+ APW +T + + I V H +
Sbjct: 121 FKG--FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDI 171
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
+R+Y DG FDL H GH L Q K L+VGV SD+ KG VL+ ++R +
Sbjct: 104 IRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETL 163
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
+ +WVDEV+ NAP+ +T +F+ EHKIDY+ H D P + D D Y K++G++
Sbjct: 164 THCRWVDEVVPNAPWCVTPEFLL----EHKIDYVAHDDIPYVSADSDDIYKPIKEMGKFL 219
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RT GVS++DI+ +I+
Sbjct: 220 TTQRTNGVSTSDIITKII 237
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 175 LAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASL-PRDPLR---AIQSKD 230
L KK +Q + TE + D +++K +++ + L PR R + K+
Sbjct: 23 LFKKNKNKRQREETEEQDNED--------KDESKNQDENKDTQLTPRKRRRLTKEFEEKE 74
Query: 231 AHLSQFLPTSRRIVQ---FSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDF 285
A + LP R + F P +Y DG FDLFH GH++ L++ ++
Sbjct: 75 ARYTNELPKELRKYRPKGFRFNLPPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVT 134
Query: 286 LLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICL 345
L+VG+ +D+I + +G ++ +R ++ CR+VDEV+ APW VT + + I
Sbjct: 135 LIVGVPSDKITHKLKGLT--VLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDY 192
Query: 346 VVHGTV 351
V H +
Sbjct: 193 VAHDDI 198
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
CRYVDEVI APW +T + + I V H +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDI 171
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
CRYVDEVI APW +T + + I V H +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDI 171
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
VRVY DG FDL H GHA AL QAK L L+VGV SD+ KG V++ ER +
Sbjct: 77 VRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEAL 136
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEVI +AP+ +T +F+ + HKID++ H D P D Y K+ G +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEK----HKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFV 192
Query: 184 QIKRTEGVSSTDIVGRIL 201
+RTEG+S++DI+ RI+
Sbjct: 193 PTQRTEGISTSDIITRIV 210
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
VY DG FDLFH+GH L +A+ L +LLVG+ +D + + +G +M+ ER ++
Sbjct: 79 VYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKG--FTVMNEAERYEAL 136
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
CRYVDEVI APW +T + + I V H +
Sbjct: 137 RHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDI 171
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 66 VRVYMDGCFDLMHYGHANALRQAKALGDE--LVVGVVSDEEIIANKGPPVLSMEERLALV 123
VR+Y DG +DL H+GHAN LRQ K + L+VGV D + KG V S EER V
Sbjct: 81 VRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGV 140
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
++VDEV AP+ T +F+ L K+D+I H P + P D Y ++ G +
Sbjct: 141 RHCRYVDEVYREAPWFCTVEFLKNL----KVDFIAHDAIPYVAPGEEDLYEKFRREGMFL 196
Query: 184 QIKRTEGVSSTDIVGRIL 201
+ +RTEGVS++D+V RI+
Sbjct: 197 ETERTEGVSTSDVVCRII 214
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
+Y DG +DLFH GH L++ +++ +L+VG+ D+ +++G + ER V
Sbjct: 83 IYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKG--RTVTSEEERYDGV 140
Query: 317 LACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTV 351
CRYVDEV APW T + + + + H +
Sbjct: 141 RHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAI 175
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERL 120
KKK++RV G FD++H GH + L+QAK LGDELVV V D+ + KG P+ SM ER
Sbjct: 3 KKKKIRVVTGGVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGRRPINSMYERA 62
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRL 148
++ LK VDEV+ P I+ + + +L
Sbjct: 63 EVLKALKMVDEVVIGEPNCISFEIVKQL 90
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 263 GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYV 322
G FD+ H GH+ LK+A++LGD L+V + D+ V E +G PI ++ER+ + A + V
Sbjct: 13 GVFDILHVGHIHFLKQAKELGDELVVIVAHDKTVEERKGR-RPINSMYERAEVLKALKMV 71
Query: 323 DEVIIGAPWEVTKDMITTFNICLVVHG 349
DEV+IG P ++ +++ N ++ G
Sbjct: 72 DEVVIGEPNCISFEIVKQLNPDIIALG 98
>sp|A1S3I3|HLDE_SHEAM Bifunctional protein HldE OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=hldE PE=3 SV=1
Length = 476
Score = 75.1 bits (183), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
GIGV S L K G++ V +GCFD++H GH + L QAKALGD L+V V
Sbjct: 320 GIGVVSEDQLVYALEQAKLRGERV---VMTNGCFDILHAGHVSYLAQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D+ + + G PV S++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDDSVRRLKGDGRPVNSVDRRMAVLAGLASVDWVV---PF--SEDTPQRVIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ K + +GVS+T I+ I+S
Sbjct: 432 KGGDYKVEDIAGGAEVIANG-GQVKVLGFEDGVSTTAIIQNIMS 474
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV L +A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLAQAKALGDRLIVAVNDDDSVRRLKGDGRPVNSV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSG 125
V +GCFD++H GH + L+QAKALGD L+V V D + KGP PV ++ R+A+++G
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVLAG 403
Query: 126 LKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQI 185
L VD V+ P+ TE R+ D ++ G D + A +A G+ + +
Sbjct: 404 LASVDWVV---PF--TEDTPQRIITRLLPDSLVKGGDYKVEDIAGGAEVIAAG-GKVEVL 457
Query: 186 KRTEGVSSTDIVGRILS 202
+GVS+T I+ I+S
Sbjct: 458 GFEDGVSTTAIIQNIMS 474
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
R+V +G FD+ HAGHV L++A+ LGD L+V + D V+ +G P+ + +R ++V
Sbjct: 342 RIVMTNGCFDILHAGHVSYLQQAKALGDRLIVAVNDDSSVTRLKGPGRPVNPV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|Q12RC7|HLDE_SHEDO Bifunctional protein HldE OS=Shewanella denitrificans (strain OS217
/ ATCC BAA-1090 / DSM 15013) GN=hldE PE=3 SV=2
Length = 476
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 31 LLGVSTSYFG--GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQA 88
L+G S+ G G GV S L + G++ V +GCFD++H GH + L+QA
Sbjct: 308 LIGALASHQGESGFGVVSEDQLAYAMEQARLRGERV---VMTNGCFDILHAGHVSYLKQA 364
Query: 89 KALGDELVVGVVSDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMN 146
KALGD L+V V SD + + G PV ++ R+A+++GL VD V+ P+ E
Sbjct: 365 KALGDRLIVAVNSDASVKRLKGDGRPVNQVDRRMAVLAGLAAVDWVV---PFC--EDTPE 419
Query: 147 RLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
R+ D ++ G D + A +A G+ + + +GVS+T I+ I++
Sbjct: 420 RIITRLLPDALVKGGDYKVEDIAGGAQVIAAG-GKVEVLGFEDGVSTTSIIQNIMA 474
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + +D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNSDASVKRLKGDGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANK-GPPVLSMEERL 120
K +++RV + G FD++H GH + L+QAK LGDELVV V DE + NK P+ E+R
Sbjct: 6 KGRKIRVLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNKRRNPINPAEDRA 65
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCL----LPDGTDAYALA 176
L+ +++VDEV +P I + + R+ D I G D L + + +
Sbjct: 66 ELLRAIRYVDEVYIGSPGGIDFELVRRI----NPDVIAIGPDQNFNCEKLKEELKRHGIE 121
Query: 177 KKVGRYKQIKRTEGVSSTDIVGRILSSM 204
+V R + +++ +T I+ RI+
Sbjct: 122 AEVIRVPYLYKSDRAKTTKIIRRIVEEF 149
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 251 GPGPNARV-VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHL 309
GP ++ V + G FD+ H GHV LK+A++LGD L+V + D+ V ++ +PI
Sbjct: 3 GPSKGRKIRVLVGGVFDILHVGHVHFLKQAKELGDELVVIVAHDETVRRNK-RRNPINPA 61
Query: 310 HERSLSVLACRYVDEVIIGAPWEVTKDMITTFN 342
+R+ + A RYVDEV IG+P + +++ N
Sbjct: 62 EDRAELLRAIRYVDEVYIGSPGGIDFELVRRIN 94
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKGPPVLSMEERL 120
K+K++RV + G FD++H GH + L+QAK LGDELVV V DE + + + P+ E+R
Sbjct: 4 KRKKIRVLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQKRREPINPAEDRA 63
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCL----LPDGTDAYALA 176
L+ +++VDEV P I + + R+ D I G D L + + +
Sbjct: 64 ELLRAIRYVDEVYIGTPGTIDMELVKRI----DPDVIAIGPDQFFNCEKLKEELRKHGIN 119
Query: 177 KKVGRYKQIKRTEGVSSTDIVGRILSS 203
+V R + +++ ++ I+ RI+ +
Sbjct: 120 AEVIRIPYLYKSDRAKTSKIIQRIVET 146
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
V + G FD+ H GH+ LK+A++LGD L+V + D+ V + PI +R+ + A
Sbjct: 10 VLVGGVFDILHVGHIHFLKQAKELGDELVVIVAHDETVRMQK-RREPINPAEDRAELLRA 68
Query: 319 CRYVDEVIIGAPWEVTKDMITTFN 342
RYVDEV IG P + +++ +
Sbjct: 69 IRYVDEVYIGTPGTIDMELVKRID 92
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEER 119
G +++RV + G FD++H GH + L+ AK LGDEL+V V DE + KG PP+ E+R
Sbjct: 2 GSDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDR 61
Query: 120 LALVSGLKWVDEVIANAPYAITEQFMNRL 148
++ +++VD+V+ P I+ + RL
Sbjct: 62 AEVLKAIRYVDDVVIGKPGEISLDLIKRL 90
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
V + G FD+ HAGHV LK A++LGD L+V + D+ V + +G PI +R+ + A
Sbjct: 9 VVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGR-PPINPAEDRAEVLKA 67
Query: 319 CRYVDEVIIGAPWEVTKDMITTFNICLVVHG 349
RYVD+V+IG P E++ D+I ++ G
Sbjct: 68 IRYVDDVVIGKPGEISLDLIKRLKPDVIALG 98
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLAL 122
+R+RV + G FD++H GH + L+ AK LGDEL+V V DE + KG PP+ E+R +
Sbjct: 5 RRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEV 64
Query: 123 VSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDP---C-LLPDGTDAYALAKK 178
+ +++VD+V+ P I+ + + +L K D I G D C L + + L +
Sbjct: 65 LRAIRYVDDVVIGEPGEISLELIKKL----KPDVIALGPDQDFDCRTLKEKLRSIGLKVE 120
Query: 179 VGRYKQIKRTEGVSSTDIVGRI 200
V R + + + ++ I+ RI
Sbjct: 121 VIRLPYLYKEDRAKTSKIIKRI 142
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 255 NARV-VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERS 313
N R+ V + G FD+ H GH+ LK A++LGD L+V + D+ V + +G PI +R+
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGR-PPINPAEDRA 62
Query: 314 LSVLACRYVDEVIIGAPWEVTKDMITTFN 342
+ A RYVD+V+IG P E++ ++I
Sbjct: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLK 91
>sp|Q4ZZ15|HLDE_PSEU2 Bifunctional protein HldE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=hldE PE=3 SV=1
Length = 474
Score = 72.0 bits (175), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERL 120
K+R+ V+ +GCFD++H GH L QA+ALGD L+V V D + KGP P+ S+E R+
Sbjct: 338 KERI-VFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVERRM 396
Query: 121 ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG 180
A+++GL VD VI + P E + + + + +G D + D AY G
Sbjct: 397 AVLAGLGAVDWVI-SFPEGTPENLLTHVKPDVLVKGGDYGVDQVVGADIVQAYG-----G 450
Query: 181 RYKQIKRTEGVSSTDIVGRI 200
+ + E S+T IV +I
Sbjct: 451 EVRVLGLVENSSTTAIVEKI 470
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 3/126 (2%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RAIQ ++ L + ++ + + R+V+ +G FD+ HAGHV L++AR LG
Sbjct: 309 RAIQREEGSERGVLGLEQLLLAVDDARAH--KERIVFTNGCFDILHAGHVTYLEQARALG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNI 343
D L+V + D VS +G PI + ER ++VLA + +I P ++++T
Sbjct: 367 DRLIVAVNDDASVSRLKGPGRPINSV-ERRMAVLAGLGAVDWVISFPEGTPENLLTHVKP 425
Query: 344 CLVVHG 349
++V G
Sbjct: 426 DVLVKG 431
>sp|P27623|TAGD_BACSU Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
(strain 168) GN=tagD PE=1 SV=1
Length = 129
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 263 GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI-VSEHRGSYHPIMHLHERSLSVLACRY 321
G FDL H GH+++L++A+QLGD+L+V I TD+ + + + +YH H R L + RY
Sbjct: 8 GTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEH---RKLILETIRY 64
Query: 322 VDEVIIGAPWEVTKDMITTFNICLVVHG 349
VDEVI WE K I NI + V G
Sbjct: 65 VDEVIPEKNWEQKKQDIIDHNIDVFVMG 92
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALV 123
K+V Y G FDL+H+GH L +AK LGD LVV + +DE + + S E R ++
Sbjct: 2 KKVITY--GTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLIL 59
Query: 124 SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYK 183
+++VDEVI + +Q + +H ID + GD D + K
Sbjct: 60 ETIRYVDEVIPEKNWEQKKQDI----IDHNIDVFVMGD------DWEGKFDFLKDQCEVV 109
Query: 184 QIKRTEGVSSTDIVGRI 200
+ RTEG+S+T I I
Sbjct: 110 YLPRTEGISTTKIKEEI 126
>sp|Q7MNY3|HLDE_VIBVY Bifunctional protein HldE OS=Vibrio vulnificus (strain YJ016)
GN=hldE PE=3 SV=2
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 59 KCGKKKRVRVYM-DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLS 115
K + K +V M +GCFD++H GH + L A LGD L+V V +DE + KGP PV
Sbjct: 333 KAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNP 392
Query: 116 MEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD--PCLLPDGTDAY 173
+ R+A+++GL VD V+ P+ +E RL +E D ++ G D P + G +
Sbjct: 393 TDRRMAVLAGLGAVDWVV---PF--SEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVI 447
Query: 174 ALAKKVGRYKQIKRTEGVSSTDIVGRI 200
A G K + +G S+T+I+ I
Sbjct: 448 AAG---GEVKVLNFEDGCSTTEIIDAI 471
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
V+ + KG +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VKAAQAKG----EKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG 387
Query: 304 HPIMHLHERSLSVLA 318
P+ + +R ++VLA
Sbjct: 388 RPV-NPTDRRMAVLA 401
>sp|Q8DEH7|HLDE_VIBVU Bifunctional protein HldE OS=Vibrio vulnificus (strain CMCP6)
GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 59 KCGKKKRVRVYM-DGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLS 115
K + K +V M +GCFD++H GH + L A LGD L+V V +DE + KGP PV
Sbjct: 333 KAAQAKGEKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPGRPVNP 392
Query: 116 MEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD--PCLLPDGTDAY 173
+ R+A+++GL VD V+ P+ +E RL +E D ++ G D P + G +
Sbjct: 393 TDRRMAVLAGLGAVDWVV---PF--SEDTPQRLISEVLPDLLVKGGDYKPEDIAGGKEVI 447
Query: 174 ALAKKVGRYKQIKRTEGVSSTDIVGRI 200
A G K + +G S+T+I+ I
Sbjct: 448 AAG---GEVKVLNFEDGCSTTEIIDAI 471
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
V+ + KG +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VKAAQAKG----EKVVMTNGCFDILHAGHVSYLNNAAKLGDRLIVAVNTDESVKRLKGPG 387
Query: 304 HPIMHLHERSLSVLA 318
P+ + +R ++VLA
Sbjct: 388 RPV-NPTDRRMAVLA 401
>sp|A4Y9Z9|HLDE_SHEPC Bifunctional protein HldE OS=Shewanella putrefaciens (strain CN-32
/ ATCC BAA-453) GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D + A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|A1RGD1|HLDE_SHESW Bifunctional protein HldE OS=Shewanella sp. (strain W3-18-1)
GN=hldE PE=3 SV=1
Length = 476
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D + A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|A4XPU9|HLDE_PSEMY Bifunctional protein HldE OS=Pseudomonas mendocina (strain ymp)
GN=hldE PE=3 SV=1
Length = 473
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 19/164 (11%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV SL L + G+K V+ +GCFD++H GH L QA+A GD L+V + D
Sbjct: 320 GVLSLDQLLIAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVAINDD 376
Query: 103 EEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ KGP P+ +++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVSRLKGPGRPINAVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLKQVQPDVLVKG 431
Query: 161 D----DPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
D + D AY G + + E S+T IV +I
Sbjct: 432 GDYGIDQVVGADIVQAYG-----GEVRVLGLVENSSTTAIVEKI 470
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q ++ L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREEGSERGVLSLDQLLIAIEDARAHG--EKIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+V I D VS +G PI + +R ++VLA
Sbjct: 367 DRLIVAINDDASVSRLKGPGRPINAV-DRRMAVLA 400
>sp|A5UCC3|HLDE_HAEIE Bifunctional protein HldE OS=Haemophilus influenzae (strain PittEE)
GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LA 318
LA
Sbjct: 400 LA 401
>sp|Q4QKN8|HLDE_HAEI8 Bifunctional protein HldE OS=Haemophilus influenzae (strain
86-028NP) GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LA 318
LA
Sbjct: 400 LA 401
>sp|B8EE43|HLDE_SHEB2 Bifunctional protein HldE OS=Shewanella baltica (strain OS223)
GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ + ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIITRLLPNLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D L A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKLEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|O05074|HLDE_HAEIN Bifunctional protein HldE OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ S L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIMSEAELKDAVAQAKARGEKI---VMTNGCFDILHPGHISYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
SD+ + KG P+ ++E R+A+++GL VD ++ P+ TE RL E D ++
Sbjct: 376 SDDSVKRLKGESRPINNLENRMAVLAGLASVDWLV---PF--TEDTPQRLIGEILPDLLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + G S+T+++ +I
Sbjct: 431 KGGDYKPEEIAGSKEVWANG---GDVKVLNFENGCSTTNVIEKI 471
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
++V +G FD+ H GH+ L+ AR+LGD L+V + +D V +G PI +L R ++V
Sbjct: 341 KIVMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENR-MAV 399
Query: 317 LA 318
LA
Sbjct: 400 LA 401
>sp|Q0HYC0|HLDE_SHESR Bifunctional protein HldE OS=Shewanella sp. (strain MR-7) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|Q0HFL0|HLDE_SHESM Bifunctional protein HldE OS=Shewanella sp. (strain MR-4) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKIEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|Q1R1M6|HLDE_CHRSD Bifunctional protein HldE OS=Chromohalobacter salexigens (strain
DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hldE PE=3 SV=1
Length = 476
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 86/180 (47%), Gaps = 20/180 (11%)
Query: 27 LTAALLGVSTSYFGGIGVFSLPHLWSDCFHKKKCGKKKRVRVYM-DGCFDLMHYGHANAL 85
L AL G + FG P S + K + RV M +GCFD++H GH L
Sbjct: 308 LYTALHGDKLAEFG-------PIEESALIDAVRAAKLRGERVVMTNGCFDILHAGHVAYL 360
Query: 86 RQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQ 143
QAK LGD LVV V D + KGP P+ ++E R+ +++GL VD V+ P+ E+
Sbjct: 361 EQAKRLGDRLVVAVNDDASVGRLKGPKRPINALERRMQVLAGLSAVDWVV---PFG--EE 415
Query: 144 FMNRLFNEHKIDYIIHGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRIL 201
RL E D ++ G D P + G A G + + +GVS+T ++ IL
Sbjct: 416 TPARLIAEVLPDVLVKGGDYRPEDIAGGEAVMAAG---GEVRVLNFEDGVSTTAMIDTIL 472
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV L++A++LGD L+V + D V +G PI L ER + V
Sbjct: 341 RVVMTNGCFDILHAGHVAYLEQAKRLGDRLVVAVNDDASVGRLKGPKRPINAL-ERRMQV 399
Query: 317 LA 318
LA
Sbjct: 400 LA 401
>sp|A0KTG8|HLDE_SHESA Bifunctional protein HldE OS=Shewanella sp. (strain ANA-3) GN=hldE
PE=3 SV=1
Length = 476
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + +G PV ++ R+A+++GL VD V+ P+ +E R+ D ++
Sbjct: 377 DDASVKRLKGEGRPVNQVDRRMAVLAGLAAVDWVV---PF--SEDTPQRIIARLLPDLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202
G D + A +A G+ + + +G+S+T I+ I++
Sbjct: 432 KGGDYKVEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMA 474
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGEGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|C3KDB8|HLDE_PSEFS Bifunctional protein HldE OS=Pseudomonas fluorescens (strain SBW25)
GN=hldE PE=3 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 16/139 (11%)
Query: 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEERLALVSG 125
V+ +GCFD++H GH L QA+A GD L+V V D + KGP P+ S++ R+A+++G
Sbjct: 342 VFTNGCFDILHAGHVTYLEQARAQGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAG 401
Query: 126 LKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGD----DPCLLPDGTDAYALAKKVGR 181
L VD VI + P A E + ++ K D ++ G D + D AY G+
Sbjct: 402 LGAVDWVI-SFPEATPENLLAQV----KPDVLVKGGDYSVDQVVGADIVSAYG-----GK 451
Query: 182 YKQIKRTEGVSSTDIVGRI 200
K + E S+T IV +I
Sbjct: 452 VKVLGLVENSSTTAIVEKI 470
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RAIQ + L + ++ + + N +V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAIQRSEGSERGVLTIEQLLLAIDDARAH--NESIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNI 343
D L+V + D VS +G PI + +R ++VLA + +I P ++++
Sbjct: 367 DRLIVAVNDDASVSRLKGPGRPINSV-DRRMAVLAGLGAVDWVISFPEATPENLLAQVKP 425
Query: 344 CLVVHG 349
++V G
Sbjct: 426 DVLVKG 431
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 62 KKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGP--PVLSMEER 119
++ + V+ +GCFDL+H GH L++A+ LGD LV+G+ SD I KGP P++S +ER
Sbjct: 349 RRGKTVVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLISEQER 408
Query: 120 LALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDD----PCLLPDGTDAYAL 175
+++ L +D V+ E L + + D ++ G D + D ++Y
Sbjct: 409 AHILAALSCIDYVV-----VFDEDTPLELIDTLRPDILVKGGDYTPETVVGKDLVESYG- 462
Query: 176 AKKVGRYKQIKRTEGVSSTDIVGRILSSME 205
GR + I +G S+T+I+ RIL E
Sbjct: 463 ----GRVELIDLVDGRSTTNIIERILDRYE 488
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERS--LS 315
VV+ +G FDL H GHV+ L+KAR+LGD L++G+ +D + +G P++ ER+ L+
Sbjct: 354 VVFTNGCFDLLHVGHVKYLQKARRLGDLLVLGLNSDASIRRLKGPSRPLISEQERAHILA 413
Query: 316 VLACRYVDEVII---GAPWEVTKDMITTFNICLVVHGTVSETNTPLTVRSK 363
L+C +D V++ P E +I T ++V G TP TV K
Sbjct: 414 ALSC--IDYVVVFDEDTPLE----LIDTLRPDILVKGG---DYTPETVVGK 455
>sp|A6VDB5|HLDE_PSEA7 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain PA7)
GN=hldE PE=3 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ KG P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGAGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G+ PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGAGRPINSV-DRRMAVLA 400
>sp|A3D837|HLDE_SHEB5 Bifunctional protein HldE OS=Shewanella baltica (strain OS155 /
ATCC BAA-1091) GN=hldE PE=3 SV=1
Length = 476
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + G PV ++ R+A+++GL VD V+ P+ +E R+ + ++
Sbjct: 377 DDASVKRLKGDGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIITRLLPNLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D L A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKLEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|A0KPL4|HLDE_AERHH Bifunctional protein HldE OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=hldE PE=3 SV=1
Length = 475
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L + G+K V +GCFD++H GH + L A LGD L+V V
Sbjct: 319 GFGVMSEAQLKIAVQAARLRGEKV---VMTNGCFDILHAGHVSYLANAGKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
+DE + KGP PV E R+A+++ L VD V+ P+A E RL E D ++
Sbjct: 376 TDESVRRLKGPGRPVNPTERRMAVLAALGAVDWVV---PFA--EDTPQRLIAEVLPDLLV 430
Query: 159 HGDDPCLLPDGTDAYA-LAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P+ YA + G + + +G S++DI+ I
Sbjct: 431 KGGD--YKPEEIAGYAEVTANGGEVRVLNFEDGCSTSDIIKTI 471
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 244 VQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSY 303
VQ + +G +VV +G FD+ HAGHV L A +LGD L+V + TD+ V +G
Sbjct: 332 VQAARLRG----EKVVMTNGCFDILHAGHVSYLANAGKLGDRLIVAVNTDESVRRLKGPG 387
Query: 304 HPIMHLHERSLSVLAC 319
P+ + ER ++VLA
Sbjct: 388 RPV-NPTERRMAVLAA 402
>sp|A9L2P0|HLDE_SHEB9 Bifunctional protein HldE OS=Shewanella baltica (strain OS195)
GN=hldE PE=3 SV=1
Length = 476
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G GV S L K G++ V +GCFD++H GH + L+QAKALGD L+V V
Sbjct: 320 GFGVVSEDQLAYALEQAKLRGERV---VMTNGCFDILHAGHVSYLKQAKALGDRLIVAVN 376
Query: 101 SDEEI--IANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D + + G PV ++ R+A+++GL VD V+ P+ +E R+ + ++
Sbjct: 377 DDASVKRLKGDGRPVNQVDRRMAVLAGLASVDWVV---PF--SEDTPQRIITRLLPNLLV 431
Query: 159 HGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203
G D L A +A G+ + + +G+S+T I+ I+++
Sbjct: 432 KGGDYKLEDIAGGAEVIAAG-GQVQVLGFEDGISTTAIIQNIMAN 475
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSV 316
RVV +G FD+ HAGHV LK+A+ LGD L+V + D V +G P+ + +R ++V
Sbjct: 342 RVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQV-DRRMAV 400
Query: 317 LA 318
LA
Sbjct: 401 LA 402
>sp|B7V388|HLDE_PSEA8 Bifunctional protein HldE OS=Pseudomonas aeruginosa (strain LESB58)
GN=hldE PE=3 SV=1
Length = 473
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 43 GVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSD 102
GV L L + G+K V+ +GCFD++H GH L QA+A GD L+VGV D
Sbjct: 320 GVLGLEQLLLAIEDARAHGEKI---VFTNGCFDILHAGHVTYLEQARAQGDRLIVGVNDD 376
Query: 103 EEIIANK--GPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHG 160
+ K G P+ S++ R+A+++GL VD V++ A E RL + + D ++ G
Sbjct: 377 ASVTRLKGVGRPINSVDRRMAVLAGLGAVDWVVSFA-----EDTPERLLEQVRPDVLVKG 431
Query: 161 DD 162
D
Sbjct: 432 GD 433
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 224 RAIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLG 283
RA+Q + L + ++ + + G ++V+ +G FD+ HAGHV L++AR G
Sbjct: 309 RAVQREQGSERGVLGLEQLLLAIEDARAHGE--KIVFTNGCFDILHAGHVTYLEQARAQG 366
Query: 284 DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA 318
D L+VG+ D V+ +G PI + +R ++VLA
Sbjct: 367 DRLIVGVNDDASVTRLKGVGRPINSV-DRRMAVLA 400
>sp|Q7VM30|HLDE_HAEDU Bifunctional protein HldE OS=Haemophilus ducreyi (strain 35000HP /
ATCC 700724) GN=hldE PE=3 SV=2
Length = 475
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 41 GIGVFSLPHLWSDCFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVV 100
G G+ + L K G+K V +GCFD++H GH + L A+ LGD L+V V
Sbjct: 319 GFGIVTEERLKQFTKEAKNRGEKI---VMTNGCFDILHPGHVSYLENARKLGDRLIVAVN 375
Query: 101 SDEEIIANKGP--PVLSMEERLALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYII 158
D+ + KG P+ S+ R+A+++GL VD VI A E RL +E D ++
Sbjct: 376 CDQSVKRLKGESRPINSLSARMAILAGLASVDWVI-----AFEEDTPQRLISEILPDVLV 430
Query: 159 HGDD--PCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRI 200
G D P + + +A G K + +G S+TD++ +I
Sbjct: 431 KGGDYKPEQIVGCQEVWA---NGGNVKALNFEDGCSTTDVIKKI 471
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 239 TSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSE 298
T R+ QF+ + ++V +G FD+ H GHV L+ AR+LGD L+V + DQ V
Sbjct: 324 TEERLKQFTK-EAKNRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNCDQSVKR 382
Query: 299 HRGSYHPIMHLHERSLSVLACRYVDEVI 326
+G PI L R + VD VI
Sbjct: 383 LKGESRPINSLSARMAILAGLASVDWVI 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,721,861
Number of Sequences: 539616
Number of extensions: 6090887
Number of successful extensions: 15921
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 14959
Number of HSP's gapped (non-prelim): 954
length of query: 366
length of database: 191,569,459
effective HSP length: 119
effective length of query: 247
effective length of database: 127,355,155
effective search space: 31456723285
effective search space used: 31456723285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)