Query 017744
Match_columns 366
No_of_seqs 374 out of 2673
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 04:15:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 2.4E-65 8.3E-70 501.7 28.3 290 63-356 5-300 (341)
2 3hl4_A Choline-phosphate cytid 100.0 1.3E-30 4.3E-35 242.3 16.5 142 60-205 71-214 (236)
3 3elb_A Ethanolamine-phosphate 99.9 1.7E-26 6E-31 226.3 15.4 146 54-203 187-337 (341)
4 3hl4_A Choline-phosphate cytid 99.9 6.9E-25 2.4E-29 203.8 9.5 102 251-354 71-174 (236)
5 2b7l_A Glycerol-3-phosphate cy 99.9 7.5E-24 2.6E-28 180.1 11.3 128 66-203 2-129 (132)
6 1coz_A Protein (glycerol-3-pho 99.9 1.2E-23 4.2E-28 177.9 11.0 127 66-202 2-128 (129)
7 3glv_A Lipopolysaccharide core 99.9 5.2E-23 1.8E-27 178.0 11.5 134 65-205 2-140 (143)
8 3op1_A Macrolide-efflux protei 99.9 1E-21 3.4E-26 190.1 11.9 135 66-203 21-177 (308)
9 1mrz_A Riboflavin kinase/FMN a 99.8 4.3E-20 1.5E-24 177.7 12.3 130 68-203 2-147 (293)
10 2x0k_A Riboflavin biosynthesis 99.8 3.3E-20 1.1E-24 181.9 10.1 136 66-203 16-174 (338)
11 3nv7_A Phosphopantetheine aden 99.8 5.6E-20 1.9E-24 161.9 7.9 91 256-353 2-97 (157)
12 3nbk_A Phosphopantetheine aden 99.8 1.5E-18 5.1E-23 155.4 10.3 94 253-353 18-116 (177)
13 1coz_A Protein (glycerol-3-pho 99.8 2E-18 6.9E-23 145.8 10.1 98 256-355 1-98 (129)
14 4f3r_A Phosphopantetheine aden 99.8 9.4E-19 3.2E-23 154.8 8.2 91 256-353 5-99 (162)
15 3glv_A Lipopolysaccharide core 99.8 2.6E-18 8.9E-23 148.5 10.7 96 255-353 1-96 (143)
16 2b7l_A Glycerol-3-phosphate cy 99.7 4.6E-18 1.6E-22 144.2 10.9 99 256-356 1-99 (132)
17 3k9w_A Phosphopantetheine aden 99.7 3.9E-18 1.3E-22 154.1 8.1 131 63-203 20-159 (187)
18 3k9w_A Phosphopantetheine aden 99.7 8.4E-18 2.9E-22 151.9 9.4 91 256-353 22-117 (187)
19 1qjc_A Phosphopantetheine aden 99.7 1.1E-17 3.7E-22 145.6 8.9 128 66-203 2-138 (158)
20 3nd5_A Phosphopantetheine aden 99.7 2.7E-17 9.1E-22 146.7 10.2 87 256-349 2-90 (171)
21 2qtr_A Nicotinate (nicotinamid 99.7 6E-18 2.1E-22 151.5 5.4 133 66-203 3-166 (189)
22 1o6b_A Phosphopantetheine aden 99.7 2.8E-17 9.4E-22 145.1 9.5 129 66-203 3-139 (169)
23 1kam_A Deamido-NAD(+), nicotin 99.7 1.8E-16 6.1E-21 143.1 14.8 133 66-203 8-171 (194)
24 3f3m_A Phosphopantetheine aden 99.7 7.3E-17 2.5E-21 143.4 9.4 87 256-349 3-90 (168)
25 3nv7_A Phosphopantetheine aden 99.7 1.1E-17 3.7E-22 147.3 3.0 125 66-203 3-139 (157)
26 4f3r_A Phosphopantetheine aden 99.7 4.2E-17 1.4E-21 144.2 6.1 130 65-203 5-141 (162)
27 1vlh_A Phosphopantetheine aden 99.7 2.6E-16 8.9E-21 140.2 9.7 86 257-349 13-99 (173)
28 1od6_A PPAT, phosphopantethein 99.6 8.8E-16 3E-20 133.8 12.1 122 68-203 3-139 (160)
29 1k4m_A NAMN adenylyltransferas 99.6 7.5E-16 2.5E-20 141.1 8.5 92 68-163 6-110 (213)
30 3f3m_A Phosphopantetheine aden 99.6 9.4E-16 3.2E-20 136.3 8.5 126 65-203 3-140 (168)
31 1qjc_A Phosphopantetheine aden 99.6 1.1E-14 3.6E-19 126.6 11.4 93 256-355 1-94 (158)
32 3nd5_A Phosphopantetheine aden 99.6 1E-14 3.4E-19 130.0 11.1 123 66-203 3-140 (171)
33 3nbk_A Phosphopantetheine aden 99.6 6.2E-15 2.1E-19 131.9 9.6 131 63-203 19-157 (177)
34 1yum_A 'probable nicotinate-nu 99.5 1.5E-14 5.2E-19 135.4 9.5 94 65-162 23-129 (242)
35 2h29_A Probable nicotinate-nuc 99.5 2.2E-14 7.4E-19 128.9 9.1 134 66-203 3-166 (189)
36 1vlh_A Phosphopantetheine aden 99.5 2.1E-14 7.2E-19 127.8 8.1 122 66-203 13-149 (173)
37 1o6b_A Phosphopantetheine aden 99.5 7.4E-14 2.5E-18 123.0 10.3 92 256-354 2-94 (169)
38 1od6_A PPAT, phosphopantethein 99.5 1E-13 3.5E-18 120.7 10.5 93 256-354 1-94 (160)
39 3h05_A Uncharacterized protein 99.5 7E-14 2.4E-18 125.1 7.8 133 66-203 3-149 (177)
40 2qjo_A Bifunctional NMN adenyl 99.4 2.5E-13 8.6E-18 131.1 10.2 130 65-203 7-151 (341)
41 1ej2_A Nicotinamide mononucleo 99.4 8.7E-13 3E-17 117.8 12.0 125 67-203 5-142 (181)
42 3do8_A Phosphopantetheine aden 99.4 1.3E-13 4.3E-18 120.0 2.9 124 67-202 2-142 (148)
43 3gmi_A UPF0348 protein MJ0951; 99.4 2.7E-12 9.3E-17 126.3 12.7 91 65-161 52-151 (357)
44 1kam_A Deamido-NAD(+), nicotin 99.4 1.3E-12 4.4E-17 117.7 8.3 96 256-355 7-117 (194)
45 1yum_A 'probable nicotinate-nu 99.3 1.8E-12 6.2E-17 121.3 8.8 92 255-351 22-129 (242)
46 2qtr_A Nicotinate (nicotinamid 99.3 9.4E-13 3.2E-17 117.6 5.8 93 256-352 2-109 (189)
47 1f9a_A Hypothetical protein MJ 99.3 1.3E-11 4.3E-16 108.9 13.0 124 67-203 2-136 (168)
48 1k4m_A NAMN adenylyltransferas 99.3 1.7E-12 5.8E-17 118.7 6.7 90 257-351 3-109 (213)
49 1kqn_A Nmnat, nicotinamide mon 99.3 4.5E-12 1.6E-16 121.0 9.6 86 65-152 8-106 (279)
50 2ejc_A Pantoate--beta-alanine 99.3 1.9E-13 6.4E-18 130.4 -2.4 113 67-180 23-161 (280)
51 3do8_A Phosphopantetheine aden 99.3 5.4E-12 1.8E-16 109.7 6.2 89 258-353 2-97 (148)
52 1nup_A FKSG76; NAD biosynthesi 99.2 6E-12 2.1E-16 118.3 5.9 88 65-152 6-104 (252)
53 1lw7_A Transcriptional regulat 99.2 1.3E-11 4.3E-16 121.2 7.2 96 256-353 2-121 (365)
54 2h29_A Probable nicotinate-nuc 99.1 4.6E-11 1.6E-15 107.1 4.1 93 256-352 2-109 (189)
55 1lw7_A Transcriptional regulat 99.1 1.2E-09 4.1E-14 107.0 14.0 128 66-200 3-154 (365)
56 2qjt_B Nicotinamide-nucleotide 99.0 2.6E-09 8.7E-14 103.6 11.9 130 65-202 7-152 (352)
57 2qjt_B Nicotinamide-nucleotide 99.0 4.5E-10 1.5E-14 108.9 6.2 60 256-319 7-66 (352)
58 1ej2_A Nicotinamide mononucleo 99.0 7.5E-10 2.6E-14 98.6 6.9 92 257-352 4-107 (181)
59 1v8f_A Pantoate-beta-alanine l 98.9 6.5E-11 2.2E-15 112.5 -2.5 128 65-197 19-186 (276)
60 1f9a_A Hypothetical protein MJ 98.9 2.7E-09 9.3E-14 93.8 8.1 90 258-351 2-100 (168)
61 1mrz_A Riboflavin kinase/FMN a 98.9 2.8E-09 9.6E-14 102.3 7.5 95 259-355 2-105 (293)
62 3h05_A Uncharacterized protein 98.8 1.8E-09 6.1E-14 96.4 5.1 89 256-351 2-108 (177)
63 2x0k_A Riboflavin biosynthesis 98.8 7.8E-09 2.7E-13 101.1 9.9 98 256-355 15-129 (338)
64 2qjo_A Bifunctional NMN adenyl 98.8 3.6E-09 1.2E-13 101.8 6.8 94 256-353 7-116 (341)
65 3ag6_A Pantothenate synthetase 98.7 9.8E-10 3.4E-14 104.7 -0.9 108 68-180 28-162 (283)
66 1nup_A FKSG76; NAD biosynthesi 98.6 3.6E-08 1.2E-12 92.4 6.7 83 256-341 6-100 (252)
67 1kqn_A Nmnat, nicotinamide mon 98.6 4E-08 1.4E-12 93.6 7.0 84 255-341 7-102 (279)
68 3op1_A Macrolide-efflux protei 98.6 7.2E-08 2.4E-12 93.1 7.5 98 256-355 20-135 (308)
69 2ejc_A Pantoate--beta-alanine 98.5 1.7E-07 5.8E-12 89.3 7.5 71 255-328 21-93 (280)
70 3cov_A Pantothenate synthetase 98.5 1.1E-08 3.8E-13 98.2 -1.4 111 68-181 35-174 (301)
71 3gmi_A UPF0348 protein MJ0951; 98.4 1.2E-06 4E-11 86.2 10.6 90 255-350 51-151 (357)
72 1v47_A ATP sulfurylase; produc 98.3 4.2E-06 1.4E-10 82.1 11.8 133 66-203 156-329 (349)
73 1jhd_A Sulfate adenylyltransfe 98.2 8.8E-06 3E-10 81.0 13.1 133 66-203 193-371 (396)
74 3uk2_A Pantothenate synthetase 97.5 0.00012 4E-09 69.6 6.8 67 67-134 23-92 (283)
75 3inn_A Pantothenate synthetase 97.0 0.0014 4.7E-08 63.0 8.0 65 66-134 44-113 (314)
76 1v8f_A Pantoate-beta-alanine l 96.9 0.0029 9.9E-08 59.9 8.5 67 258-328 21-88 (276)
77 3q12_A Pantoate--beta-alanine 96.5 0.0019 6.7E-08 61.3 4.5 61 66-134 26-95 (287)
78 3ag6_A Pantothenate synthetase 96.2 0.016 5.4E-07 55.0 8.9 70 255-328 22-94 (283)
79 3q12_A Pantoate--beta-alanine 96.0 0.0078 2.7E-07 57.1 5.6 37 255-294 24-62 (287)
80 1jhd_A Sulfate adenylyltransfe 95.7 0.025 8.6E-07 56.1 8.4 91 257-354 193-300 (396)
81 3mxt_A Pantothenate synthetase 95.3 0.028 9.7E-07 53.2 6.8 61 69-134 31-94 (285)
82 3cov_A Pantothenate synthetase 95.3 0.034 1.2E-06 53.2 7.3 65 263-328 39-105 (301)
83 3mxt_A Pantothenate synthetase 95.0 0.022 7.5E-07 54.0 5.0 66 255-327 24-94 (285)
84 3inn_A Pantothenate synthetase 94.7 0.089 3E-06 50.5 8.4 68 255-326 42-112 (314)
85 1v47_A ATP sulfurylase; produc 94.6 0.043 1.5E-06 53.5 6.2 89 258-353 157-260 (349)
86 1r6x_A ATP:sulfate adenylyltra 94.5 0.23 8E-06 49.1 11.2 94 66-164 188-292 (395)
87 3n8h_A Pantothenate synthetase 94.3 0.054 1.9E-06 50.7 5.8 62 68-134 26-94 (264)
88 1g8f_A Sulfate adenylyltransfe 94.3 0.51 1.7E-05 48.3 13.4 94 66-164 189-293 (511)
89 3uk2_A Pantothenate synthetase 94.0 0.11 3.9E-06 49.1 7.4 71 255-327 21-92 (283)
90 3n8h_A Pantothenate synthetase 93.0 0.065 2.2E-06 50.1 3.9 40 254-294 22-61 (264)
91 1m8p_A Sulfate adenylyltransfe 89.8 1 3.5E-05 46.5 9.2 94 66-164 191-295 (573)
92 2gks_A Bifunctional SAT/APS ki 89.4 1.4 4.8E-05 45.2 9.8 93 67-164 165-269 (546)
93 1x6v_B Bifunctional 3'-phospho 87.2 7 0.00024 40.8 13.5 95 65-164 412-525 (630)
94 3cr8_A Sulfate adenylyltranfer 84.4 7.3 0.00025 40.0 11.8 94 66-164 164-268 (552)
95 2gks_A Bifunctional SAT/APS ki 74.3 10 0.00035 38.8 9.0 90 259-355 166-271 (546)
96 1m8p_A Sulfate adenylyltransfe 70.7 6.8 0.00023 40.3 6.7 90 259-355 193-297 (573)
97 1r6x_A ATP:sulfate adenylyltra 59.8 40 0.0014 33.1 9.5 91 258-355 189-294 (395)
98 1g8f_A Sulfate adenylyltransfe 52.1 34 0.0011 34.7 7.8 91 258-355 190-295 (511)
99 3cr8_A Sulfate adenylyltranfer 42.4 59 0.002 33.1 7.9 91 257-355 165-270 (552)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-65 Score=501.66 Aligned_cols=290 Identities=46% Similarity=0.829 Sum_probs=249.1
Q ss_pred CCCeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCCccccH
Q 017744 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (366)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~~ 142 (366)
+++++|++.||||++|.||+++|++|+++||+|+||+++|+.+.+.|++|+++.+||++++++|+|||+|++..|+...+
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~~ 84 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTL 84 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSCCH
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCCHH
Confidence 55778999999999999999999999999999999999999877677789999999999999999999999977776667
Q ss_pred HHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHhccccccccccccC--CCCCC
Q 017744 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNN--ASLPR 220 (366)
Q Consensus 143 eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~~~~~~~~~~~~~~--~~~~~ 220 (366)
+|+ ++++||++|+|+||++|.++.+.|+.+++.|+++.+++++++|||+|++||+.+++.++....... .+...
T Consensus 85 efi----~~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
T 3elb_A 85 ETL----DKYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYAD 160 (341)
T ss_dssp HHH----HHTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--------------------
T ss_pred HHH----HHhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHH
Confidence 887 468999999999999999999999999999999999999999999999999999998875332111 11222
Q ss_pred Cchh--hhccCcccccccccccceeecccCCCCCCCCCeEEEEcCccccCChHHHHHHHHHHhcCC--EEEEEEecCchh
Q 017744 221 DPLR--AIQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVGIYTDQIV 296 (366)
Q Consensus 221 ~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd--~LiVgV~sD~~v 296 (366)
.++. .+.++++.+++|++++++|.||++|+.|.+++++||++|||||||.||+++|++|+++|| +|||||++|+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v 240 (341)
T 3elb_A 161 SFGKCPGGRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEV 240 (341)
T ss_dssp -----------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHH
T ss_pred hhccCccccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhh
Confidence 3332 234678889999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCCCchHHHHHHcCCcEEEECCCCCCCC
Q 017744 297 SEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNT 356 (366)
Q Consensus 297 ~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~~~~~d~i~~~~~~~vv~G~~~~~~~ 356 (366)
+++||+++|+|+++||++++++|++||+|++.+|++++.+++++++||++|||++|....
T Consensus 241 ~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~ 300 (341)
T 3elb_A 241 NHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPD 300 (341)
T ss_dssp HHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEEECSSCCHHHHHHTTCSEEEECSSCCCCC
T ss_pred HhhcCCCCCCCCHHHHHHHHHHcCCCCCEEECCCCcchHHHHHhcCCcEEEECCCCcccc
Confidence 999998789999999999999999999999999999999999999999999999987643
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.97 E-value=1.3e-30 Score=242.29 Aligned_cols=142 Identities=43% Similarity=0.685 Sum_probs=131.3
Q ss_pred cCCCCCeEEEEecccCcCCHHHHHHHHHHHHh--CCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCC
Q 017744 60 CGKKKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAP 137 (366)
Q Consensus 60 ~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~l--gd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p 137 (366)
...+++++||+.|+||++|.||+++|++|+++ +|+|+|||++|+.+.++|++|+++.+||++++++|+|||+|+++.|
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~p 150 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSCC
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECCc
Confidence 34467889999999999999999999999999 5899999999998877788899999999999999999999999999
Q ss_pred ccccHHHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHhccc
Q 017744 138 YAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSME 205 (366)
Q Consensus 138 ~~~~~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~~~~ 205 (366)
|+++.+|++ ++++|+||+|+|+.++.++.+.|+.+++.|++..+++++++|||+|++||++...
T Consensus 151 ~~l~~d~i~----~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~ 214 (236)
T 3hl4_A 151 WTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYD 214 (236)
T ss_dssp SSCCHHHHH----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CcCcHHHHH----HcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHH
Confidence 998888885 5899999999999999888899999999999999999999999999999997743
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=226.27 Aligned_cols=146 Identities=31% Similarity=0.579 Sum_probs=131.1
Q ss_pred HhhhcccCCCCCeEEEEecccCcCCHHHHHHHHHHHHhCC--eeEEEEccchhhhhcCC--CCCCcHHHHHHHHhcCccc
Q 017744 54 CFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGD--ELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWV 129 (366)
Q Consensus 54 ~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qAk~lgd--~LvVgv~sd~~i~~~K~--~pi~t~eER~~ll~~~~~V 129 (366)
||+....+.++.++|++.||||++|.||..+|++|++++| +|+|||++|+.+++.|+ +|+++.+||++++++|++|
T Consensus 187 ~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~v 266 (341)
T 3elb_A 187 QFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYV 266 (341)
T ss_dssp HHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTC
T ss_pred eeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCC
Confidence 6666655556678999999999999999999999999999 99999999999887776 6999999999999999999
Q ss_pred cEEEecCCccccHHHHHHHhhccCccEEEEcCCCCC-CCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 017744 130 DEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCL-LPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (366)
Q Consensus 130 D~vv~~~p~~~~~eFl~~ll~~l~~d~VV~G~D~~f-g~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~~ 203 (366)
|+|+++.||.++.+|++ ++++|++|+|+||.. ...+.+.|+..+..|+++.+++++++|||+|++||+++
T Consensus 267 d~V~v~~~~~l~~~~~~----~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~n 337 (341)
T 3elb_A 267 SEVVIGAPYAVTAELLS----HFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITN 337 (341)
T ss_dssp CEEEEEECSSCCHHHHH----HTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-
T ss_pred CCEEECCCCcchHHHHH----hcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHH
Confidence 99999999998888875 579999999999865 34567889999999999999999999999999999854
No 4
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.91 E-value=6.9e-25 Score=203.78 Aligned_cols=102 Identities=37% Similarity=0.735 Sum_probs=94.8
Q ss_pred CCCCCCeEEEEcCccccCChHHHHHHHHHHhc--CCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 251 ~~~~~~~~v~~~GsFD~~h~GHi~~L~~A~~~--gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
.|.+.+++||++|+||+||.||+++|++|+++ +|+|||||++|+.++++|| .|+|+++||++++++|++||+|+++
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg--~pi~s~eER~e~v~~~k~VD~Vvv~ 148 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAVQHCRYVDEVVRN 148 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC--CCSSCHHHHHHHHHTBTTCSEEESS
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC--CCCCCHHHHHHHHHHhCCCCeEEEC
Confidence 45567889999999999999999999999999 5899999999998888887 4999999999999999999999999
Q ss_pred CCCCchHHHHHHcCCcEEEECCCCCC
Q 017744 329 APWEVTKDMITTFNICLVVHGTVSET 354 (366)
Q Consensus 329 ~~~~~~~d~i~~~~~~~vv~G~~~~~ 354 (366)
++++++.+|++++++|+||||++|..
T Consensus 149 ~p~~l~~d~i~~~~~d~Vv~GDd~~~ 174 (236)
T 3hl4_A 149 APWTLTPEFLAEHRIDFVAHDDIPYS 174 (236)
T ss_dssp CCSSCCHHHHHHTTCCEEEEESSCCC
T ss_pred CcCcCcHHHHHHcCCCEEEECCcccc
Confidence 99999999999999999999998754
No 5
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.90 E-value=7.5e-24 Score=180.06 Aligned_cols=128 Identities=29% Similarity=0.474 Sum_probs=94.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFM 145 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~~eFl 145 (366)
++++++|+||++|.||+.++++|++++++++|++++++.....+.+|+++.+||++++++++++|.++...+++ +|+
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~~ 78 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QKE 78 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GHH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HHH
Confidence 47999999999999999999999999999999999988432212268999999999999998899998755553 566
Q ss_pred HHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 017744 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (366)
Q Consensus 146 ~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~~ 203 (366)
+. +++++++++|+|+||. +.++.|++.+++..++++..||||.||++|.++
T Consensus 79 ~~-~~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 79 DD-VEKFDVDVFVMGHDWE------GEFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HH-HHHTTCCEEEECGGGT------TTTGGGTTTSEEEECSSCC--------------
T ss_pred HH-HHHcCCCEEEECCCCc------CcHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 65 5678999999999993 234567888999999998899999999999866
No 6
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.90 E-value=1.2e-23 Score=177.93 Aligned_cols=127 Identities=34% Similarity=0.503 Sum_probs=105.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQFM 145 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~~eFl 145 (366)
++++++|+|||+|.||+.++++|++.+++++|++++++.....+.+++++.+||++++++++++|.++...+++ +|+
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~~ 78 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWE---QKK 78 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCST---THH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HHH
Confidence 47999999999999999999999999999999999987322112268999999999999998899988765554 566
Q ss_pred HHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHh
Q 017744 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILS 202 (366)
Q Consensus 146 ~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~ 202 (366)
+. +++++++++++|+||. +.++.+++.+++..+++...||||.||++|.+
T Consensus 79 ~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~~ 128 (129)
T 1coz_A 79 QD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIAG 128 (129)
T ss_dssp HH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC--
T ss_pred HH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHHh
Confidence 54 4678999999999983 34556788899999999999999999998753
No 7
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.89 E-value=5.2e-23 Score=178.02 Aligned_cols=134 Identities=33% Similarity=0.442 Sum_probs=88.6
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~~eF 144 (366)
+++++++|+|||+|.||+.+|++|+++++.++|++++++.....+.+++++.+||+++++++++||.++...|. +|
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~----~f 77 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEG----DM 77 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTT----CH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCch----hH
Confidence 56899999999999999999999999999999999998865542337899999999999999889999986543 35
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCC-eEEEec--c--CCCCCHHHHHHHHHhccc
Q 017744 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R--TEGVSSTDIVGRILSSME 205 (366)
Q Consensus 145 l~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g-~~~~v~--r--~~~vSST~Ir~rI~~~~~ 205 (366)
++ ++++++++++|+|+||+|+.. ...+..++.| .+.+++ . +..||||.||++|.+..+
T Consensus 78 ~~-~~~~l~~~~iv~G~d~~f~~~--~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 78 MK-TVIEVKPDIITLGYDQKFDEA--ELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HH-HHHHHCCSEEEECTTCHHHHH--HHHHHHHHHTCCCEEEECCCCC------------------
T ss_pred HH-HHHhcCCCEEEECCCCCCCHH--HHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 54 567899999999999988421 1122223333 232222 2 357999999999987654
No 8
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.86 E-value=1e-21 Score=190.05 Aligned_cols=135 Identities=21% Similarity=0.204 Sum_probs=109.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCee---EEEEccch--h-hhhc---CC-CCCCcHHHHHHHHhcCccccEEEec
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDEL---VVGVVSDE--E-IIAN---KG-PPVLSMEERLALVSGLKWVDEVIAN 135 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~L---vVgv~sd~--~-i~~~---K~-~pi~t~eER~~ll~~~~~VD~vv~~ 135 (366)
..|+++|+|||+|.||+.+|++|++.|+.+ .+.++.|+ . +... +. +++++.+||+++++++ +||.++.
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~- 98 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL- 98 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE-
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE-
Confidence 479999999999999999999999998542 44455544 2 2221 12 5799999999999998 6999987
Q ss_pred CCcc-----cc-HHHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCCe--EEEecc----CCCCCHHHHHHHHHhc
Q 017744 136 APYA-----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIKR----TEGVSSTDIVGRILSS 203 (366)
Q Consensus 136 ~p~~-----~~-~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g~--~~~v~r----~~~vSST~Ir~rI~~~ 203 (366)
.||+ .+ ++|+++++.+++++.+|+|+||+||. +.++.+.|++.++ +.+++. ++.||||.||+.|.++
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~G 177 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDG 177 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHHT
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHcC
Confidence 4453 22 58998888889999999999999999 9999999998875 666665 4579999999999876
No 9
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.82 E-value=4.3e-20 Score=177.73 Aligned_cols=130 Identities=22% Similarity=0.280 Sum_probs=101.7
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCe---eEEEEccc--hhhhh-cCCCCCCcHHHHHHHHhcCccccEEEecCCc---
Q 017744 68 VYMDGCFDLMHYGHANALRQAKALGDE---LVVGVVSD--EEIIA-NKGPPVLSMEERLALVSGLKWVDEVIANAPY--- 138 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~lgd~---LvVgv~sd--~~i~~-~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~--- 138 (366)
|+++|+||++|.||+++|++|+++|+. ..+++++| +.+.. .+.+++++.+||++++++++ ++.++. |
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~---F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLD---FFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEEC---HHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEE---hHHh
Confidence 789999999999999999999999864 22344444 33322 22367999999999999997 555544 3
Q ss_pred -ccc-HHHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCC-eEEEecc----CCCCCHHHHHHHHHhc
Q 017744 139 -AIT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKR----TEGVSSTDIVGRILSS 203 (366)
Q Consensus 139 -~~~-~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g-~~~~v~r----~~~vSST~Ir~rI~~~ 203 (366)
..+ ++|+++++ ++++++|+|+||+||.++.++.+.|++.| ++..++. +..||||.||+.|.++
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 122 58888766 89999999999999999999999998754 6666664 3579999999999876
No 10
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.81 E-value=3.3e-20 Score=181.89 Aligned_cols=136 Identities=16% Similarity=0.230 Sum_probs=108.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCe---eEEEEccchh---hh-hcC-CCCCCcHHHHHHHHhcCccccEEEecCC
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDE---LVVGVVSDEE---II-ANK-GPPVLSMEERLALVSGLKWVDEVIANAP 137 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~---LvVgv~sd~~---i~-~~K-~~pi~t~eER~~ll~~~~~VD~vv~~~p 137 (366)
..|+++|+|||+|.||+.+|++|++.++. ..+++++|+. +. +.+ .+++++.+||+++++++ +||.++. .|
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-ID 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-EC
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-cc
Confidence 37999999999999999999999998854 3566666653 22 222 25699999999999998 6999876 33
Q ss_pred cc-----cc-HHHHHH-HhhccCccEEEEcCCCCCCCCCCchHHHHHhCC----eEEEecc----CCCCCHHHHHHHHHh
Q 017744 138 YA-----IT-EQFMNR-LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR----TEGVSSTDIVGRILS 202 (366)
Q Consensus 138 ~~-----~~-~eFl~~-ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g----~~~~v~r----~~~vSST~Ir~rI~~ 202 (366)
|+ .+ ++|+++ ++++++++++|+|+||+||.++.++.+.|++.+ ++..++. +..||||.||+.|.+
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 42 22 489988 457799999999999999999999999888765 4556665 447999999999987
Q ss_pred c
Q 017744 203 S 203 (366)
Q Consensus 203 ~ 203 (366)
+
T Consensus 174 G 174 (338)
T 2x0k_A 174 G 174 (338)
T ss_dssp T
T ss_pred C
Confidence 6
No 11
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.80 E-value=5.6e-20 Score=161.88 Aligned_cols=91 Identities=21% Similarity=0.319 Sum_probs=83.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
|++++++|||||+|.||++++++|++++|+|+|++++|. .| +|+++.+||+++++. ++.+++|.+..+++++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K---~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK---NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC---CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 579999999999999999999999999999999999874 35 589999999999998 6999999988878899
Q ss_pred HHHHHHcCCcEEEEC----CCCC
Q 017744 335 KDMITTFNICLVVHG----TVSE 353 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G----~~~~ 353 (366)
.+++++++|+++||| +||+
T Consensus 75 ~~~~~~~~~~~ivrG~r~~~D~~ 97 (157)
T 3nv7_A 75 AYLAKEYHCKVLVRGLRVVSDFE 97 (157)
T ss_dssp HHHHHHTTCCCBCCCCSCCCCHH
T ss_pred HHHHHHcCCCEEEECCcccchhh
Confidence 999999999999999 7776
No 12
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.76 E-value=1.5e-18 Score=155.39 Aligned_cols=94 Identities=22% Similarity=0.326 Sum_probs=84.5
Q ss_pred CCCCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCC
Q 017744 253 GPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPW 331 (366)
Q Consensus 253 ~~~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~ 331 (366)
..+|++++++|||||+|.||++++++|++++|+|+|+++.|+ .| +|+++.+||+++++. ++..++|.+...+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K---~~~~s~eeR~~mv~~a~~~~~~v~V~~~e 90 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK---TGMFDLDERIAMVKESTTHLPNLRVQVGH 90 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS---CCSSCHHHHHHHHHHHCTTCTTEEEEECC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC---CCCCCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 456899999999999999999999999999999999999763 45 589999999999996 6899999999889
Q ss_pred CchHHHHHHcCCcEEEEC----CCCC
Q 017744 332 EVTKDMITTFNICLVVHG----TVSE 353 (366)
Q Consensus 332 ~~~~d~i~~~~~~~vv~G----~~~~ 353 (366)
+++.|++++++++++||| .||+
T Consensus 91 ~l~vd~~~~~~a~~ivrGlr~~~Dfe 116 (177)
T 3nbk_A 91 GLVVDFVRSCGMTAIVKGLRTGTDFE 116 (177)
T ss_dssp SCHHHHHHHTTCCEEEEEECTTCCHH
T ss_pred chHHHHHHHcCCCEEEECCCchhHHH
Confidence 999999999999999999 6665
No 13
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.76 E-value=2e-18 Score=145.75 Aligned_cols=98 Identities=38% Similarity=0.570 Sum_probs=86.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCCCchH
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~~~~~ 335 (366)
|+++++.|+|||+|.||+.++++|++.+|.++|+++.|+.. ..|++ .|+++.+||.+++++++++|.|++..++..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~-~~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFN-LQKQK-KAYHSYEHRKLILETIRYVDEVIPEKNWEQKK 78 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHH-HHHTC-CCSSCHHHHHHHHTTBTTCCEEEEECCSTTHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHH-hcCCC-CCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHH
Confidence 57899999999999999999999999999999999998632 23554 68999999999999999999999877777778
Q ss_pred HHHHHcCCcEEEECCCCCCC
Q 017744 336 DMITTFNICLVVHGTVSETN 355 (366)
Q Consensus 336 d~i~~~~~~~vv~G~~~~~~ 355 (366)
+.+++++++++|.|.||+.+
T Consensus 79 ~~l~~~~~~~iv~G~D~~~~ 98 (129)
T 1coz_A 79 QDIIDHNIDVFVMGDDWEGK 98 (129)
T ss_dssp HHHHHTTCSEEEEEGGGTTT
T ss_pred HHHHHhCCcEEEECCCCCCc
Confidence 88999999999999999744
No 14
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.76 E-value=9.4e-19 Score=154.76 Aligned_cols=91 Identities=20% Similarity=0.290 Sum_probs=78.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCCCchH
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~~~~~ 335 (366)
|++++++|||||+|.||++++++|++++|+|+|++++|+ .| +|+++.+||+++++.+...|+|.+..+++++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K---~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK---DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-------------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 689999999999999999999999999999999999773 35 59999999999999864349998888888999
Q ss_pred HHHHHcCCcEEEEC----CCCC
Q 017744 336 DMITTFNICLVVHG----TVSE 353 (366)
Q Consensus 336 d~i~~~~~~~vv~G----~~~~ 353 (366)
+++++++++++|+| .||+
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~ 99 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFD 99 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHH
T ss_pred HHHHHcCCCEEEECCCchhhhh
Confidence 99999999999999 6665
No 15
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.76 E-value=2.6e-18 Score=148.45 Aligned_cols=96 Identities=25% Similarity=0.408 Sum_probs=86.9
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCCCch
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVT 334 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~~~~ 334 (366)
+|++|++.|+||++|.||+.+|++|++++|.++|+|+.|+...+ |++ .|+++.+||.++++++++||+|++..+++ .
T Consensus 1 ~m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~-~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f 77 (143)
T 3glv_A 1 GMIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN-NGK-IPIFDENSRLALISELKVVDRAILGHEGD-M 77 (143)
T ss_dssp CCCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH-TTC-CCSSCHHHHHHHHTTBTTCSEEEECCTTC-H
T ss_pred CceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh-cCC-CCCCCHHHHHHHHHhcCCCCEEEEcCchh-H
Confidence 37899999999999999999999999999999999999877654 444 79999999999999999999999988877 4
Q ss_pred HHHHHHcCCcEEEECCCCC
Q 017744 335 KDMITTFNICLVVHGTVSE 353 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G~~~~ 353 (366)
.+++++++++++|+|.|+.
T Consensus 78 ~~~~~~l~~~~iv~G~d~~ 96 (143)
T 3glv_A 78 MKTVIEVKPDIITLGYDQK 96 (143)
T ss_dssp HHHHHHHCCSEEEECTTCH
T ss_pred HHHHHhcCCCEEEECCCCC
Confidence 5799999999999999974
No 16
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.75 E-value=4.6e-18 Score=144.24 Aligned_cols=99 Identities=30% Similarity=0.554 Sum_probs=86.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCCCchH
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~~~~~ 335 (366)
|+++++.|+|||+|.||+.++++|++++|.++|+++.|+... .|++ .|+++.+||.+++++++++|.|++..++..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQ-IKHK-KSYYDYEQRKMMLESIRYVDLVIPEKGWGQKE 78 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHH-HTTC-CCSSCHHHHHHHHHTBTTCCEEEEECCGGGHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHh-ccCC-CCCCCHHHHHHHHHhcCCCCEEEECCChHHHH
Confidence 578999999999999999999999999999999999987432 3444 68999999999999999999999976666778
Q ss_pred HHHHHcCCcEEEECCCCCCCC
Q 017744 336 DMITTFNICLVVHGTVSETNT 356 (366)
Q Consensus 336 d~i~~~~~~~vv~G~~~~~~~ 356 (366)
+.+++++++++|.|.|++.+.
T Consensus 79 ~~~~~~~~~~iv~G~D~~~~~ 99 (132)
T 2b7l_A 79 DDVEKFDVDVFVMGHDWEGEF 99 (132)
T ss_dssp HHHHHTTCCEEEECGGGTTTT
T ss_pred HHHHHcCCCEEEECCCCcCcH
Confidence 889999999999999996543
No 17
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.73 E-value=3.9e-18 Score=154.14 Aligned_cols=131 Identities=22% Similarity=0.252 Sum_probs=93.0
Q ss_pred CCCeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCc-cc
Q 017744 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AI 140 (366)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~-~~ 140 (366)
..++++++.|+||++|.||+.++++|++++|+++|+|.+++ .| +|+++.+||+++++. ++++|.+.. .+| ++
T Consensus 20 ~~mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~~f~~~ 93 (187)
T 3k9w_A 20 GSMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-MGFTGL 93 (187)
T ss_dssp CCCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-EEESSC
T ss_pred CCcEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-Eechhh
Confidence 33578999999999999999999999999999999998864 23 589999999999998 578998866 233 23
Q ss_pred cHHHHHHHhhccCccEEEEc----CCCCCCCCCCchHHHHHhCCeEEEeccC---CCCCHHHHHHHHHhc
Q 017744 141 TEQFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (366)
Q Consensus 141 ~~eFl~~ll~~l~~d~VV~G----~D~~fg~~g~~~~~~lk~~g~~~~v~r~---~~vSST~Ir~rI~~~ 203 (366)
+.+| +++++++++|+| .||.+...-......+...-+.+.+... ..||||.||+++..+
T Consensus 94 ~~d~----l~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 94 LKDF----VRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp HHHH----HHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred HHHH----HHHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 3444 456899999999 5654211000000011112233334333 479999999999865
No 18
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.72 E-value=8.4e-18 Score=151.94 Aligned_cols=91 Identities=23% Similarity=0.328 Sum_probs=83.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
|++++++|+|||+|.||++++++|++++|+|+|+|.+|+ .| +|+++.+||.++++. ++.+|+|++..+++++
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K---~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~ 94 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK---KPFFSLEERLKIANEVLGHYPNVKVMGFTGLL 94 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTCTTEEEEEESSCH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHHhccCCcEEEEechhhH
Confidence 789999999999999999999999999999999999873 34 589999999999998 5999999998878899
Q ss_pred HHHHHHcCCcEEEEC----CCCC
Q 017744 335 KDMITTFNICLVVHG----TVSE 353 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G----~~~~ 353 (366)
.+++++++++++|+| .||+
T Consensus 95 ~d~l~~l~~~~iv~G~r~~~Df~ 117 (187)
T 3k9w_A 95 KDFVRANDARVIVRGLRAVSDFE 117 (187)
T ss_dssp HHHHHHTTCSEEEEECCTTSCHH
T ss_pred HHHHHHcCCCEEEECCCcccccc
Confidence 999999999999999 6654
No 19
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.72 E-value=1.1e-17 Score=145.58 Aligned_cols=128 Identities=16% Similarity=0.224 Sum_probs=92.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCcc-ccHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITEQ 143 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~~-~~~e 143 (366)
++++++|+|||+|.||+.++++|++.+|+++++++.++ .| +++++.++|++|++. +.++|.+... +++ ++.+
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~~~~~~~ 75 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEVV-GFSDLMAN 75 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCHHH
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEEc-ccchHHHH
Confidence 47899999999999999999999999999999988764 34 478999999999995 6788877652 232 3333
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCCchHHHH-HhCC----eEEEeccC--CCCCHHHHHHHHHhc
Q 017744 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA-KKVG----RYKQIKRT--EGVSSTDIVGRILSS 203 (366)
Q Consensus 144 Fl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~l-k~~g----~~~~v~r~--~~vSST~Ir~rI~~~ 203 (366)
++++++++++++|.|+.++.........+ +..+ .+..++.. ..||||.||++|.++
T Consensus 76 ----~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 76 ----FARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp ----HHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred ----HHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 44667899999999987654322222111 2211 22233322 469999999999866
No 20
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.71 E-value=2.7e-17 Score=146.67 Aligned_cols=87 Identities=14% Similarity=0.395 Sum_probs=76.5
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEE-cCCCCc
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVII-GAPWEV 333 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi-~~~~~~ 333 (366)
|++++++|||||+|.||++++++|++++|+|+|+++.| ..| +|+++.+||+++++. ++.+++|.+ ...+++
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~----~~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFIN----TSK---QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-------------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecC----CCC---CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 57999999999999999999999999999999999866 345 589999999999985 699999988 777789
Q ss_pred hHHHHHHcCCcEEEEC
Q 017744 334 TKDMITTFNICLVVHG 349 (366)
Q Consensus 334 ~~d~i~~~~~~~vv~G 349 (366)
+.|++++++++++|+|
T Consensus 75 tvd~~~~l~~~~~i~G 90 (171)
T 3nd5_A 75 TVESAKSLGANFLIRG 90 (171)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHCCCCEEEEC
Confidence 9999999999999999
No 21
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.70 E-value=6e-18 Score=151.54 Aligned_cols=133 Identities=19% Similarity=0.085 Sum_probs=102.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCC-CCCCcHHHHHHHHhc-CccccEEEecCCcc--
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vv~~~p~~-- 139 (366)
++++++|+|||+|.||+.++++|++.+ +.+++.+++++ ..|. +++++.+||++|++. ++++|.+.. .+++
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~---~~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIP---PHKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSC---TTCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCC---CCccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 578999999999999999999999998 88999988765 2343 578999999999995 667887765 3443
Q ss_pred -----ccHHHHHHHhhccCcc---EEEEcCCCCCCCCCCchHHHHHhCCeEEEecc-----------------CCCCCHH
Q 017744 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKR-----------------TEGVSST 194 (366)
Q Consensus 140 -----~~~eFl~~ll~~l~~d---~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r-----------------~~~vSST 194 (366)
++.++++.+-.++ |+ ++|+|.|+.++..+++.++.+.+.+.+..+.| ...||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 4445554433332 33 39999999999888888988888777665544 1369999
Q ss_pred HHHHHHHhc
Q 017744 195 DIVGRILSS 203 (366)
Q Consensus 195 ~Ir~rI~~~ 203 (366)
.||+++.++
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999866
No 22
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.70 E-value=2.8e-17 Score=145.09 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=92.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCccccHHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~~~~~eF 144 (366)
++++++|+|||+|.||+.++++|++.+|+++|.+..++ .| +++++.+||++|++. +..+|.+.. .+++ +|
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~ 73 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQ---GL 73 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECS---SC
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccc---hH
Confidence 47899999999999999999999999999888776432 34 578999999999995 467776654 2332 23
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCCchHHHHHh----CCeEEEecc---CCCCCHHHHHHHHHhc
Q 017744 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK----VGRYKQIKR---TEGVSSTDIVGRILSS 203 (366)
Q Consensus 145 l~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~----~g~~~~v~r---~~~vSST~Ir~rI~~~ 203 (366)
..+++++++++++++|.|+.++.+.......+.+ ..+...+.. ...||||.||+++.++
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 3334466889999999999877543333322222 112233222 2369999999999876
No 23
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.70 E-value=1.8e-16 Score=143.10 Aligned_cols=133 Identities=18% Similarity=0.051 Sum_probs=97.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCC-CCCCcHHHHHHHHhc-CccccEEEecCCcc--
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vv~~~p~~-- 139 (366)
++++++|+||++|.||+.++++|++.+ +.++++++++. +.|. +++++.++|++|++. +++++.+.. .+|+
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~---~~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIP---PHKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCC---CCcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 578999999999999999999999998 88888888765 2343 578999999999994 778887765 3343
Q ss_pred -----ccHHHHHHHhhccCcc---EEEEcCCCCCCCCCCchHHHHHhCCeEEEeccC-----------------CCCCHH
Q 017744 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (366)
Q Consensus 140 -----~~~eFl~~ll~~l~~d---~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~-----------------~~vSST 194 (366)
++.++++.+-.++ |+ ++|+|.|+.++...+..++.+.+...+..+.|. ..||||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 5556666554444 45 999999999888888777766555554444431 269999
Q ss_pred HHHHHHHhc
Q 017744 195 DIVGRILSS 203 (366)
Q Consensus 195 ~Ir~rI~~~ 203 (366)
.||+++.++
T Consensus 163 ~IR~~i~~g 171 (194)
T 1kam_A 163 MIRERFKSK 171 (194)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999876
No 24
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.68 E-value=7.3e-17 Score=143.43 Aligned_cols=87 Identities=17% Similarity=0.261 Sum_probs=77.9
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
+++++++|||||+|.||++++++|++++|+|+|+++.|+ .| +|+++.+||+++++. ++.+++|.+...++++
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK---EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC------------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC---CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 579999999999999999999999999999999999763 45 589999999999996 5889999998888999
Q ss_pred HHHHHHcCCcEEEEC
Q 017744 335 KDMITTFNICLVVHG 349 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G 349 (366)
.|++++++++++|+|
T Consensus 76 vd~~~~l~~~~~I~G 90 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRG 90 (168)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHHcCCCEEEEc
Confidence 999999999999999
No 25
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.67 E-value=1.1e-17 Score=147.27 Aligned_cols=125 Identities=20% Similarity=0.228 Sum_probs=89.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCc-cccHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AITEQ 143 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~-~~~~e 143 (366)
+++++.|+||++|.||+.++++|++++|+|+|++.+++ .| +|+++.+||+++++. ++.++.+... +| ....+
T Consensus 3 ~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v~-~~~~l~~~ 76 (157)
T 3nv7_A 3 KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVECV-AFEGLLAY 76 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEEE-EECSCHHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEEE-ecCchHHH
Confidence 57999999999999999999999999999999998875 34 589999999999997 6678876542 22 22334
Q ss_pred HHHHHhhccCccEEEEc----CCCCCCCCCCchHHHHHhCC---eEEEeccCC---CCCHHHHHHHHHhc
Q 017744 144 FMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVG---RYKQIKRTE---GVSSTDIVGRILSS 203 (366)
Q Consensus 144 Fl~~ll~~l~~d~VV~G----~D~~fg~~g~~~~~~lk~~g---~~~~v~r~~---~vSST~Ir~rI~~~ 203 (366)
|+ ++++++++|.| .||.+..+ ....-+... +...+..++ .+|||.||+.+..+
T Consensus 77 ~~----~~~~~~~ivrG~r~~~D~~ye~~---~a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 77 LA----KEYHCKVLVRGLRVVSDFEYELQ---MGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HH----HHTTCCCBCCCCSCCCCHHHHHH---HHHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEECCcccchhhhhHH---HHHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 44 56899999999 66631100 000011221 222233333 79999999998855
No 26
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.67 E-value=4.2e-17 Score=144.18 Aligned_cols=130 Identities=18% Similarity=0.204 Sum_probs=85.3
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccEEEecCCccccHHH
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~~eF 144 (366)
++++++.|+||++|.||+.++++|++++|+|+|++..++ .| +|+++.+||++|++.+...+.+........+.++
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~ 79 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLVDF 79 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHHHH
Confidence 358999999999999999999999999999999999765 34 6899999999999975444765442212234455
Q ss_pred HHHHhhccCccEEEEc----CCCCCCCCCCchHHHHHhCCeEEEeccC---CCCCHHHHHHHHHhc
Q 017744 145 MNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (366)
Q Consensus 145 l~~ll~~l~~d~VV~G----~D~~fg~~g~~~~~~lk~~g~~~~v~r~---~~vSST~Ir~rI~~~ 203 (366)
+ ++++++++|.| .||.....-......+...-+...+..+ ..||||.||+++..+
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 5 46799999999 4542100000000011112233444343 379999999999865
No 27
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.65 E-value=2.6e-16 Score=140.16 Aligned_cols=86 Identities=24% Similarity=0.341 Sum_probs=78.9
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHH-hcCCCCcEEEcCCCCchH
Q 017744 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVTK 335 (366)
Q Consensus 257 ~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vvi~~~~~~~~ 335 (366)
-+++++|||||+|.||++++++|++++|+|+|++++|. .| +|+++.+||++|++ +++.+++|.+...++.+.
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k---k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tv 85 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK---KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLV 85 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC---CCCCCHHHHHHHHHHHhcCCCCEEEecCcchHH
Confidence 47999999999999999999999999999999999873 34 58999999999998 689999998877777899
Q ss_pred HHHHHcCCcEEEEC
Q 017744 336 DMITTFNICLVVHG 349 (366)
Q Consensus 336 d~i~~~~~~~vv~G 349 (366)
+++++++++++++|
T Consensus 86 d~l~~l~~~~~i~g 99 (173)
T 1vlh_A 86 DYLKKHGIKVLVRG 99 (173)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHHhCCCeEEeC
Confidence 99999999999999
No 28
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.65 E-value=8.8e-16 Score=133.84 Aligned_cols=122 Identities=22% Similarity=0.278 Sum_probs=86.1
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCC-CCCCcHHHHHHHHhc-CccccEEEecCCccccHHHH
Q 017744 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYAITEQFM 145 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vv~~~p~~~~~eFl 145 (366)
++++|+|||+|.||+.++++|++.+|+++++++.++ .|. .++++.++|++|++. +.++|.+.. .+++ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999988887653 243 468999999999995 567786654 2332 133
Q ss_pred HHHhhccCccEEEEcCCCCCCCCCCchHHHHH-------hCC---e-EEEecc--CCCCCHHHHHHHHHhc
Q 017744 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------KVG---R-YKQIKR--TEGVSSTDIVGRILSS 203 (366)
Q Consensus 146 ~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk-------~~g---~-~~~v~r--~~~vSST~Ir~rI~~~ 203 (366)
.+++++++++++++|.|. +++++.++ ..+ . +..+.. ...||||.||+++.++
T Consensus 75 ~~~l~~l~~~~~v~G~d~------~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRA------VSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECT------TSCHHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCc------ccchHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 344567899999999873 23333332 111 2 222322 2479999999999876
No 29
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.61 E-value=7.5e-16 Score=141.08 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=75.2
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCCCCCCcHHHHHHHHh-cCccccEEEecCCc------
Q 017744 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY------ 138 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vv~~~p~------ 138 (366)
++++|+|||+|.||+.++++|++.+ |.+++.+++++. .|..++++.++|++|++ ++++++.+.. .+|
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999987 888888887642 34446899999999999 5677887765 333
Q ss_pred -cccHHHHHHHhhccCcc---EEEEcCCC
Q 017744 139 -AITEQFMNRLFNEHKID---YIIHGDDP 163 (366)
Q Consensus 139 -~~~~eFl~~ll~~l~~d---~VV~G~D~ 163 (366)
+++.+|++.+.++++++ ++++|.|.
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 35678888776677899 99999974
No 30
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.61 E-value=9.4e-16 Score=136.26 Aligned_cols=126 Identities=21% Similarity=0.257 Sum_probs=84.9
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCccccHH
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQ 143 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~~~~~e 143 (366)
++++++.|+||++|.||+.++++|++++|+++|++..++ .| +++++.++|++|++. ++..+.+....--.++.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tvd 77 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVD 77 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCHHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCHHH
Confidence 458999999999999999999999999999999998754 34 589999999999996 456665543211134556
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCCchHHH-H----HhC---CeEEEeccC---CCCCHHHHHHHHHhc
Q 017744 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYAL-A----KKV---GRYKQIKRT---EGVSSTDIVGRILSS 203 (366)
Q Consensus 144 Fl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~-l----k~~---g~~~~v~r~---~~vSST~Ir~rI~~~ 203 (366)
++ +++++++++.|-|-.... .|+. + +.. .+.+.+..+ ..||||.||+++..+
T Consensus 78 ~~----~~l~~~~~I~G~d~~~d~----~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 78 YC----EQVGAKTIIRGLRAVSDF----EYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HH----HHHTCCEEEEEECTTCCH----HHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HH----HHcCCCEEEEcCCchhhh----hHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 65 457899999995432221 1221 1 111 122222222 249999999999866
No 31
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.57 E-value=1.1e-14 Score=126.57 Aligned_cols=93 Identities=17% Similarity=0.326 Sum_probs=81.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
++++++.|+|||+|.||+.++++|++.+|.+++.++.|+ .| +++++.+||.++++. +..+|++.+...++.+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~ 73 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK---KPMFTLEERVALAQQATAHLGNVEVVGFSDLM 73 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC---CCCCCHHHHHHHHHHHHhcCCCeEEcccchHH
Confidence 478999999999999999999999999999999998763 35 478999999999995 7999999887766788
Q ss_pred HHHHHHcCCcEEEECCCCCCC
Q 017744 335 KDMITTFNICLVVHGTVSETN 355 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G~~~~~~ 355 (366)
.++++++++++++.|.+...+
T Consensus 74 ~~~l~~l~~~~~v~G~d~~~~ 94 (158)
T 1qjc_A 74 ANFARNQHATVLIRGLRAVAD 94 (158)
T ss_dssp HHHHHHTTCCEEEEECCTTCC
T ss_pred HHHHHHcCCCEEEEeccchhh
Confidence 999999999999999765443
No 32
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.57 E-value=1e-14 Score=129.97 Aligned_cols=123 Identities=21% Similarity=0.254 Sum_probs=84.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEe-cCCccccHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA-NAPYAITEQ 143 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~-~~p~~~~~e 143 (366)
+++++.|+||++|.||..++++|++++|+|+|++..++ .| +|+++.++|++|++. ++.++.+.. ..--+++.+
T Consensus 3 ~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tvd 77 (171)
T 3nd5_A 3 KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVE 77 (171)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHHH
T ss_pred eEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHHH
Confidence 57999999999999999999999999999999997653 34 489999999999995 567776654 221145566
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCCchHHHHH-------hC---CeEEEe-c--cCCCCCHHHHHHHHHhc
Q 017744 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------KV---GRYKQI-K--RTEGVSSTDIVGRILSS 203 (366)
Q Consensus 144 Fl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk-------~~---g~~~~v-~--r~~~vSST~Ir~rI~~~ 203 (366)
+++ ++++++++.|.|. ..+++... .. .+...+ . ....||||.||+++..+
T Consensus 78 ~~~----~l~~~~~i~G~~~------~~d~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 78 SAK----SLGANFLIRGIRN------VKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HHH----HHTCCEEEEEECS------HHHHHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHH----HCCCCEEEECCCc------hhhhHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 664 5689999999442 12222211 11 122222 2 23379999999999865
No 33
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.57 E-value=6.2e-15 Score=131.90 Aligned_cols=131 Identities=17% Similarity=0.147 Sum_probs=90.0
Q ss_pred CCCeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCcccc
Q 017744 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAIT 141 (366)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~~~~ 141 (366)
.+++++++.|+||++|.||..++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+....-..++
T Consensus 19 ~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~l~ 93 (177)
T 3nbk_A 19 SHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQVGHGLV 93 (177)
T ss_dssp -CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEECCSCH
T ss_pred CCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEecCchH
Confidence 44678999999999999999999999999999999998764 34 489999999999995 5666666542222345
Q ss_pred HHHHHHHhhccCccEEEEcCCCCCCCCCCch----HHHHHhCCeEEEecc---CCCCCHHHHHHHHHhc
Q 017744 142 EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDA----YALAKKVGRYKQIKR---TEGVSSTDIVGRILSS 203 (366)
Q Consensus 142 ~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~----~~~lk~~g~~~~v~r---~~~vSST~Ir~rI~~~ 203 (366)
.+|+ +++++++++.|-+.....+.+-. ...+ ..-+.+.+.. ...||||.||+++..+
T Consensus 94 vd~~----~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 94 VDFV----RSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp HHHH----HHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred HHHH----HHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 5666 45899999999332111110000 0112 2233333322 3479999999998755
No 34
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.53 E-value=1.5e-14 Score=135.42 Aligned_cols=94 Identities=23% Similarity=0.323 Sum_probs=75.7
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEecCCc---
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY--- 138 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~~p~--- 138 (366)
++++++.|+||++|.||+.++++|++.+ |.++++++.++. .|..++++.++|++|++. +.+++.+.+. +|
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTVD-PRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEEC-CGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEEe-eeeec
Confidence 4578999999999999999999999998 999999988752 344578999999999994 6777877662 33
Q ss_pred ----cccHHHHHHHhhccCcc---EEEEcCC
Q 017744 139 ----AITEQFMNRLFNEHKID---YIIHGDD 162 (366)
Q Consensus 139 ----~~~~eFl~~ll~~l~~d---~VV~G~D 162 (366)
+++.++++.+-.+++|+ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 46678887765666677 8999986
No 35
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.52 E-value=2.2e-14 Score=128.89 Aligned_cols=134 Identities=17% Similarity=0.123 Sum_probs=94.6
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCC-CCCCcHHHHHHHHhc-CccccEEEecC-----
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANA----- 136 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~-~pi~t~eER~~ll~~-~~~VD~vv~~~----- 136 (366)
+++++.|+||++|.||+.++++|++.+ +.+++.++++.. .|. .++++.++|++|++. ++..+.+....
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 578999999999999999999999987 888877777652 343 578999999999994 55555444321
Q ss_pred -CccccHHHHHHHhhccCcc---EEEEcCCCCCCCCCCchHHHHHhCCeEEEeccC-----------------CCCCHHH
Q 017744 137 -PYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSSTD 195 (366)
Q Consensus 137 -p~~~~~eFl~~ll~~l~~d---~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~-----------------~~vSST~ 195 (366)
..+++.++++.+.+.+ |+ ++++|.|.-.....+..++.+-....+..+.|. ..||||.
T Consensus 80 ~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST~ 158 (189)
T 2h29_A 80 GGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTM 158 (189)
T ss_dssp CSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHHH
T ss_pred CCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHHH
Confidence 2346667777665444 66 999998854333334444544444555554442 3699999
Q ss_pred HHHHHHhc
Q 017744 196 IVGRILSS 203 (366)
Q Consensus 196 Ir~rI~~~ 203 (366)
||+++..+
T Consensus 159 IR~~i~~g 166 (189)
T 2h29_A 159 IRQRVSEG 166 (189)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999865
No 36
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.51 E-value=2.1e-14 Score=127.77 Aligned_cols=122 Identities=23% Similarity=0.314 Sum_probs=86.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHh-cCccccEEEecCCcc-ccHH
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPYA-ITEQ 143 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~-~~~~VD~vv~~~p~~-~~~e 143 (366)
-++++.|+||++|.||+.++++|++++|+|+|++.+++ .| +++++.++|++|++ +++.++.+... +++ ++.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~tvd 86 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKVD-VHHGLLVD 86 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEEe-cCcchHHH
Confidence 36999999999999999999999999999999999864 23 38899999999999 68887866542 232 4555
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCCchHHHH------Hh-C---CeEEEecc---CCCCCHHHHHHHHHhc
Q 017744 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA------KK-V---GRYKQIKR---TEGVSSTDIVGRILSS 203 (366)
Q Consensus 144 Fl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~l------k~-~---g~~~~v~r---~~~vSST~Ir~rI~~~ 203 (366)
++ +++++++++.|-.- +.+|+.+ .+ . .+...+.. ...+|||.||+++..+
T Consensus 87 ~l----~~l~~~~~i~gl~~------w~d~~~~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 87 YL----KKHGIKVLVRGLRA------VTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HH----HHHTCCEEEEEECT------TSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HH----HHhCCCeEEeCCCc------ccchhhccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 55 45688999988321 1111111 11 1 12222222 2369999999999865
No 37
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.50 E-value=7.4e-14 Score=123.02 Aligned_cols=92 Identities=16% Similarity=0.317 Sum_probs=80.7
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
++++++.|+|||+|.||+.++++|++.+|.++|.+..+ ..| +++++.+||.++++. ++.+|.+.+...+..+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~----p~k---~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 74 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNN----SSK---KPLFSVEERCELLREVTKDIPNITVETSQGLL 74 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCC----CSS---CCSSCHHHHHHHHHHHHTTCTTEEEEECSSCH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCC----Ccc---CCCCCHHHHHHHHHHHHhcCCCEEEcccchHH
Confidence 47899999999999999999999999999999988754 334 478999999999996 5889999887776788
Q ss_pred HHHHHHcCCcEEEECCCCCC
Q 017744 335 KDMITTFNICLVVHGTVSET 354 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G~~~~~ 354 (366)
.++++++++++++.|.|...
T Consensus 75 ~~~l~~l~~~~~i~G~d~~~ 94 (169)
T 1o6b_A 75 IDYARRKNAKAILRGLRAVS 94 (169)
T ss_dssp HHHHHHTTCSEEEEEECSGG
T ss_pred HHHHHHcCCCEEEEcCcccc
Confidence 99999999999999988654
No 38
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.49 E-value=1e-13 Score=120.70 Aligned_cols=93 Identities=16% Similarity=0.261 Sum_probs=77.9
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCCCch
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~~~~ 334 (366)
|+ +++.|+|||+|.||+.++++|++.+|.++|.++.++ .|.. .++++.++|+++++. ++.+|.+.+...++.+
T Consensus 1 m~-~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 74 (160)
T 1od6_A 1 MH-VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRG-QYLFSAEERLAIIREATAHLANVEAATFSGLL 74 (160)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC----------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred Ce-EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCC-CCCCCHHHHHHHHHHHhcCCCCEEEEecCchH
Confidence 35 899999999999999999999999999999998663 3422 378999999999985 6889998887766789
Q ss_pred HHHHHHcCCcEEEECCCCCC
Q 017744 335 KDMITTFNICLVVHGTVSET 354 (366)
Q Consensus 335 ~d~i~~~~~~~vv~G~~~~~ 354 (366)
.++++++++++++.|.+...
T Consensus 75 ~~~l~~l~~~~~v~G~d~~~ 94 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRAVS 94 (160)
T ss_dssp HHHHHHTTCSEEEEEECTTS
T ss_pred HHHHHHcCCCEEEEeCCccc
Confidence 99999999999999977443
No 39
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.46 E-value=7e-14 Score=125.10 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=95.4
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcC-cccc--EEEe--------
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWVD--EVIA-------- 134 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~-~~VD--~vv~-------- 134 (366)
++++++|+||++|.||..+++ |.+..|++++++.++. +.| +++.+.++|++|++.. +..+ .+..
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 578999999999999999998 7776799999988752 223 5689999999999862 2211 1221
Q ss_pred cCC-ccccHHHHHHHhhcc-Ccc-EEEEcCCCCCCCCCCchHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 017744 135 NAP-YAITEQFMNRLFNEH-KID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (366)
Q Consensus 135 ~~p-~~~~~eFl~~ll~~l-~~d-~VV~G~D~~fg~~g~~~~~~lk~~g~~~~v~r~~~vSST~Ir~rI~~~ 203 (366)
... .++|.+.++.+.+.+ +.+ ++++|.|.-.+...+..++.+-+...+..+++...||||+||++|.++
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 012 456667777665555 233 789999965555556667777777889999998899999999999876
No 40
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.44 E-value=2.5e-13 Score=131.12 Aligned_cols=130 Identities=16% Similarity=0.133 Sum_probs=88.0
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCccccE----E--EecCC-
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE----V--IANAP- 137 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~~VD~----v--v~~~p- 137 (366)
+++++++|+||++|.||+.++++|++.+|+++|++.++.. +++....++.++|++|++.. ..|. + +....
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~i~~~d~ 83 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRV--AADTRNPWRSPERMAMIEAC-LSPQILKRVHFLTVRDW 83 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETC--CCCSSSCSCHHHHHHHHHTT-SCHHHHTTEEEEEEECC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCccc--CCCCCCCCCHHHHHHHHHHH-hhhccCCeEEEEECCCC
Confidence 4689999999999999999999999999998888887653 22333458999999999975 3332 2 22111
Q ss_pred -cccc--HHHHHHHhhccC---ccEEEEcCCCCCCCCCCchHHHHHhC--CeEEEeccCCCCCHHHHHHHHHhc
Q 017744 138 -YAIT--EQFMNRLFNEHK---IDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRILSS 203 (366)
Q Consensus 138 -~~~~--~eFl~~ll~~l~---~d~VV~G~D~~fg~~g~~~~~~lk~~--g~~~~v~r~~~vSST~Ir~rI~~~ 203 (366)
+... .+|.+++++.+. ++++++|.++... ....+.. -.+..++....||||.||+++.++
T Consensus 84 ~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 84 LYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS------SYYLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG------GGGGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC------hHHHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 1111 355544444433 7899999887321 1111222 234555545789999999999866
No 41
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.42 E-value=8.7e-13 Score=117.75 Aligned_cols=125 Identities=16% Similarity=0.159 Sum_probs=83.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcC-ccc----cEEE-ecCC-cc
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV----DEVI-ANAP-YA 139 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~-~~V----D~vv-~~~p-~~ 139 (366)
+++++|+||++|.||+.++++|++.+|+++|++.+... ++|..++++.++|+++++.. ... +.+. .+.+ +.
T Consensus 5 ~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d~~~ 82 (181)
T 1ej2_A 5 RGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDIE 82 (181)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCS
T ss_pred EEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecCccC
Confidence 68999999999999999999999999999988844432 23345678999999999963 222 3333 2221 11
Q ss_pred cc---HHHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCC-eEEEeccCC--CCCHHHHHHHHHhc
Q 017744 140 IT---EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (366)
Q Consensus 140 ~~---~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g-~~~~v~r~~--~vSST~Ir~rI~~~ 203 (366)
.. .+|++++. ..++.+++|.|+ ..+.++..+ ++..++..+ .||||.||+++.++
T Consensus 83 ~~~~w~~~~~~l~--~~~~~~v~gr~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 83 CNALWVGHIKMLT--PPFDRVYSGNPL--------VQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp CHHHHHHHHHHHS--CCCSEEECCCHH--------HHHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHC--CCCCEEEECCHH--------HHHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 11 24444432 367889999765 112233333 344454433 59999999999876
No 42
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.37 E-value=1.3e-13 Score=120.04 Aligned_cols=124 Identities=23% Similarity=0.327 Sum_probs=82.4
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhC-CeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcC--cc----ccEEEecCCcc
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KW----VDEVIANAPYA 139 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~lg-d~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~--~~----VD~vv~~~p~~ 139 (366)
++++.|+||++|.||..++++|.+++ |+|+|++++++...+. ..++++.++|++|++.. +. +..+-+..+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k~-~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARAR-IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH-SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCcccccc-CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 58999999999999999999999997 8999999999865322 36899999999998873 11 22222334443
Q ss_pred ccHHHHHHHhhccCccEEEEcCCCCCCCCCCchHH-HHHhCC----eEEEecc-----CCCCCHHHHHHHHHh
Q 017744 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA-LAKKVG----RYKQIKR-----TEGVSSTDIVGRILS 202 (366)
Q Consensus 140 ~~~eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~-~lk~~g----~~~~v~r-----~~~vSST~Ir~rI~~ 202 (366)
.+. .-++|++|++.+-..+ ..... ..++.| ++..++. ...+|||.||+++.+
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~~---~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYEM---ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHHH---HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhccc---HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 331 2478999999776322 11121 223333 3444443 346999999988764
No 43
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=2.7e-12 Score=126.30 Aligned_cols=91 Identities=22% Similarity=0.231 Sum_probs=73.4
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchh--hhhcCC-CCCCcHHHHHHHHhcCccccEEEecCCcccc
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE--IIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAIT 141 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~--i~~~K~-~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~ 141 (366)
+++|+++|.|||+|.||+.+|++|++ .+ ++++|.+... +. ++ +.+++.++|.++++.+ +||.|+. .||.+.
T Consensus 52 ~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~~~ 125 (357)
T 3gmi_A 52 DKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPMGI 125 (357)
T ss_dssp CCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCGGG
T ss_pred CCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCchhh
Confidence 45899999999999999999999999 55 4555555432 32 33 6799999999999997 9999987 555333
Q ss_pred ---HHHHHH---HhhccCccEEEEcC
Q 017744 142 ---EQFMNR---LFNEHKIDYIIHGD 161 (366)
Q Consensus 142 ---~eFl~~---ll~~l~~d~VV~G~ 161 (366)
++|++. ++.++++++||+|+
T Consensus 126 ~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 126 MGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp SCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 589876 77889999999998
No 44
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.35 E-value=1.3e-12 Score=117.72 Aligned_cols=96 Identities=13% Similarity=0.072 Sum_probs=74.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCC-
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPW- 331 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~- 331 (366)
++++++.|+|||+|.||+.++++|++.+ |.+++.++.+. ..|+. .++++.+||.++++. ++.++.+.+...+
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~---~~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 82 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIP---PHKQN-EDYTDSFHRVEMLKLAIQSNPSFKLELVEM 82 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC-------------CHHHHHHHHHHHHTTCTTEEECCGGG
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCC---CCcCC-cCCCCHHHHHHHHHHHHcCCCCeEEeHHHh
Confidence 3789999999999999999999999998 99999998764 34432 478999999999985 7999999986543
Q ss_pred -----CchHHHHHHcCCc------EEEECCCCCCC
Q 017744 332 -----EVTKDMITTFNIC------LVVHGTVSETN 355 (366)
Q Consensus 332 -----~~~~d~i~~~~~~------~vv~G~~~~~~ 355 (366)
..+.+.++.++.. ++|.|.|+-.+
T Consensus 83 ~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~ 117 (194)
T 1kam_A 83 EREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEY 117 (194)
T ss_dssp STTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTT
T ss_pred cCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhh
Confidence 4677888777655 99999987655
No 45
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.34 E-value=1.8e-12 Score=121.29 Aligned_cols=92 Identities=21% Similarity=0.203 Sum_probs=78.2
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHH-hcCCCCcEEEcCCC
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW 331 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vvi~~~~ 331 (366)
.++++++.|+|||+|.||++++++|++.+ |.++|+++.|. ..|+ .++++.++|+++++ +++.+++|.+...+
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~---p~K~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e 96 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARP---PHRE--TPQVSAAQRLAMVERAVAGVERLTVDPRE 96 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCC---GGGS--CTTCCHHHHHHHHHHHHTTCTTEEECCGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCC---CCCC--CCCCCHHHHHHHHHHHhcCCCeEEEeeee
Confidence 36789999999999999999999999998 99999999884 2352 47899999999999 57899999997644
Q ss_pred ------CchHHHHHHc----CCc---EEEECCC
Q 017744 332 ------EVTKDMITTF----NIC---LVVHGTV 351 (366)
Q Consensus 332 ------~~~~d~i~~~----~~~---~vv~G~~ 351 (366)
..+.|+++.+ +|+ ++|+|.|
T Consensus 97 ~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 97 LQRDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp GGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred ecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 5889998776 688 7999964
No 46
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.33 E-value=9.4e-13 Score=117.61 Aligned_cols=93 Identities=16% Similarity=0.102 Sum_probs=77.0
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCCC-
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPW- 331 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~~- 331 (366)
++++++.|+|||+|.||+.++++|++.+ |.+++.++.+. ..|+. .++++.+||+++++. ++.+|.+.+...+
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~---~~k~~-~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIP---PHKQG-RNITSVESRLQMLELATEAEEHFSICLEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSC---TTCTT-SCCCCHHHHHHHHHHHHTTCTTEEECCTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCC---CCccC-CCCCCHHHHHHHHHHHhCCCCCEEEehHHh
Confidence 4789999999999999999999999999 99999998775 33432 478999999999995 6889999987654
Q ss_pred -----CchHHHHHHcCCcE------EEECCCC
Q 017744 332 -----EVTKDMITTFNICL------VVHGTVS 352 (366)
Q Consensus 332 -----~~~~d~i~~~~~~~------vv~G~~~ 352 (366)
..+.+.+++++..+ +|.|.|.
T Consensus 78 ~~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D~ 109 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDM 109 (189)
T ss_dssp GSCSCCCHHHHHHHHHHHCTTCEEEEEEEHHH
T ss_pred cCCCCCCHHHHHHHHHHHCCCCCEEEEEehhh
Confidence 57888888887666 9999664
No 47
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.33 E-value=1.3e-11 Score=108.88 Aligned_cols=124 Identities=20% Similarity=0.338 Sum_probs=78.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeeEEEE-ccchhhhhcCCCCCCcHHHHHHHHhc-Ccccc-EEEe--cCCcccc
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVD-EVIA--NAPYAIT 141 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv-~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD-~vv~--~~p~~~~ 141 (366)
+++++|+||++|.||+.++++|++.+|+++|++ +.++ +.|..+.++.++|++|++. ++..+ .+.. -..+...
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~ 78 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFN 78 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccH
Confidence 589999999999999999999999999999988 4433 2333346799999999995 44443 3321 1112111
Q ss_pred H---HHHHHHhhccCccEEEEcCCCCCCCCCCchHHHHHhCC-eEEEeccCC--CCCHHHHHHHHHhc
Q 017744 142 E---QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (366)
Q Consensus 142 ~---eFl~~ll~~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g-~~~~v~r~~--~vSST~Ir~rI~~~ 203 (366)
. +++.++ ...++.++.|.++ ....+...+ .+...+..+ .||||.||+++..+
T Consensus 79 ~~w~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 79 SIWVSYVESL--TPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GGHHHHHHHH--SCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHHh--ccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 2 223222 2356777766432 112233222 333443322 59999999999866
No 48
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.31 E-value=1.7e-12 Score=118.66 Aligned_cols=90 Identities=16% Similarity=0.137 Sum_probs=74.6
Q ss_pred eE-EEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHH-hcCCCCcEEEcCCC-
Q 017744 257 RV-VYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (366)
Q Consensus 257 ~~-v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vvi~~~~- 331 (366)
++ +++.|+|||+|.||++++++|++.+ |.+++.++.+. ..|. .++++.+||+++++ +++.++.|.+...+
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~---~~k~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 77 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVP---PHRP--QPEANSVQRKHMLELAIADKPLFTLDEREL 77 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSC---TTSC--CCSSCHHHHHHHHHHHHTTCTTEEECCHHH
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCC---CCCC--CCCCCHHHHHHHHHHHhccCCCEEEeHHHh
Confidence 36 8999999999999999999999998 99999888764 2343 36899999999998 67899999986432
Q ss_pred -----CchHHHHHHc----CCc---EEEECCC
Q 017744 332 -----EVTKDMITTF----NIC---LVVHGTV 351 (366)
Q Consensus 332 -----~~~~d~i~~~----~~~---~vv~G~~ 351 (366)
..+.++++.+ +++ ++|.|.|
T Consensus 78 ~~~~~s~t~~~l~~l~~~~~~~~~~~~i~G~D 109 (213)
T 1k4m_A 78 KRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQD 109 (213)
T ss_dssp HCSSCCCHHHHHHHHHHHHCTTSCEEEEEEHH
T ss_pred cCCCCCcHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 4567877776 899 9999964
No 49
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.31 E-value=4.5e-12 Score=121.00 Aligned_cols=86 Identities=15% Similarity=0.106 Sum_probs=58.5
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCC-----eeEEEE-ccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEec--
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGD-----ELVVGV-VSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIAN-- 135 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd-----~LvVgv-~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~~-- 135 (366)
+++++++|+||++|.||+.++++|++.++ .++|++ .+.. ....| .++++.++|++|++. +...+.+...
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~-~~~~K-~~l~s~~~R~~ml~~ai~~~~~~~v~~~ 85 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVG-DAYKK-KGLIPAYHRVIMAELATKNSKWVEVDTW 85 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECC-GGGCC-TTCCCHHHHHHHHHHHTTTCSSEEECCT
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCC-CCccc-cCCCCHHHHHHHHHHHhcCCCcEEEecc
Confidence 46789999999999999999999998863 254432 2211 12334 468999999999995 3566665542
Q ss_pred ----CCccccHHHHHHHhhcc
Q 017744 136 ----APYAITEQFMNRLFNEH 152 (366)
Q Consensus 136 ----~p~~~~~eFl~~ll~~l 152 (366)
..+++|.+.++.+-+++
T Consensus 86 E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 86 ESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp GGGCSSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcHHHHHHHHHHHH
Confidence 23455566676555555
No 50
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.27 E-value=1.9e-13 Score=130.39 Aligned_cols=113 Identities=14% Similarity=0.156 Sum_probs=77.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchh--hhhcC-CCCCCcHHHHHHHHhcCccccEEEecCCcccc-H
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE--IIANK-GPPVLSMEERLALVSGLKWVDEVIANAPYAIT-E 142 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~--i~~~K-~~pi~t~eER~~ll~~~~~VD~vv~~~p~~~~-~ 142 (366)
+|.+.|+||++|.||+.||++|++.++.++|++..++. ..+.. .+.+.+.++|+++++++ +||.++.....++. +
T Consensus 23 ~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~p~~~~m~p~ 101 (280)
T 2ejc_A 23 TIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFHPSVEEMYPP 101 (280)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEECCCHHHHSCT
T ss_pred EEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEeCCHHHCCCc
Confidence 35666999999999999999999999999999965554 22211 13467899999999998 59999973211111 1
Q ss_pred HHH--------HH-HhhccCccE------------EEEc-CCCCCCCCCCchHHHHHhCC
Q 017744 143 QFM--------NR-LFNEHKIDY------------IIHG-DDPCLLPDGTDAYALAKKVG 180 (366)
Q Consensus 143 eFl--------~~-ll~~l~~d~------------VV~G-~D~~fg~~g~~~~~~lk~~g 180 (366)
+|. .. +..+++|.+ .++| +|++||.++.+....+++++
T Consensus 102 ~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~ 161 (280)
T 2ejc_A 102 DFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMV 161 (280)
T ss_dssp TCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHH
T ss_pred CceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHH
Confidence 232 11 112233333 3444 59999999998888888765
No 51
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.25 E-value=5.4e-12 Score=109.73 Aligned_cols=89 Identities=22% Similarity=0.369 Sum_probs=66.2
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcC-CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-c-CC----CCcEEEcCC
Q 017744 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-C-RY----VDEVIIGAP 330 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~~~g-d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~-~~----Vd~Vvi~~~ 330 (366)
+|+++|||||+|.||+.++++|++++ |+|+|++++|+...+ | . +|+++.+||+++++. + +. +.-+-+.++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~-~-~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~ 78 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-R-I-RSVLPFAIRAENVKRYVMRKYGFEPEIVKITNP 78 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-H-S-CCCSCHHHHHHHHHHHHHHHHSSCCEEEEECST
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-c-C-CCCCCHHHHHHHHHHHHhcccCCcEEEEeecCC
Confidence 48999999999999999999999997 999999999976532 2 2 689999999988776 3 21 222333455
Q ss_pred CCchHHHHHHcCCcEEEECCCCC
Q 017744 331 WEVTKDMITTFNICLVVHGTVSE 353 (366)
Q Consensus 331 ~~~~~d~i~~~~~~~vv~G~~~~ 353 (366)
++.+. .-.+|++|-+.+..
T Consensus 79 ~g~~~----~~~~d~ivvs~Et~ 97 (148)
T 3do8_A 79 YGKTL----DVDFEYLVVSPETY 97 (148)
T ss_dssp TTTTT----TSCCSEEEECTTTH
T ss_pred CCCCC----CCCCCEEEEChhhc
Confidence 55543 35777887666553
No 52
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.23 E-value=6e-12 Score=118.26 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=57.8
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCe----eEEEEccchhhhhcCCCCCCcHHHHHHHHhc-CccccEEEe-----
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE----LVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA----- 134 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~----LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~-~~~VD~vv~----- 134 (366)
+++++++|+||++|.||+.++++|++.++. .+|++...+.....+.+++++.++|++|++. +...+.+..
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 467899999999999999999999998743 4543333332112222468999999999984 333333332
Q ss_pred -cCCccccHHHHHHHhhcc
Q 017744 135 -NAPYAITEQFMNRLFNEH 152 (366)
Q Consensus 135 -~~p~~~~~eFl~~ll~~l 152 (366)
...+++|.+.++.+-+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 223456666776554455
No 53
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.21 E-value=1.3e-11 Score=121.19 Aligned_cols=96 Identities=19% Similarity=0.233 Sum_probs=70.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchh-----hcccCCCCCCCCHHHHHHHHHh-cCCCCc-EEEc
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIV-----SEHRGSYHPIMHLHERSLSVLA-CRYVDE-VIIG 328 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v-----~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~-Vvi~ 328 (366)
+++++++|+|||+|.||++++++|++++|+|+|++++++.- +..+.+ +| ++.+||++|++. ++..++ |.+.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~R~~m~~~~~~~~~~~~~v~ 79 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMK-RM-PTVQDRLRWMQQIFKYQKNQIFIH 79 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCS-SC-CCHHHHHHHHHHHTSTTTTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccC-CC-CCHHHHHHHHHHHhhcCCCcEEEE
Confidence 57899999999999999999999999999999999998642 111112 35 999999999974 588777 6664
Q ss_pred CCCCch-----------H----HHHH--HcCCcEEEECCCCC
Q 017744 329 APWEVT-----------K----DMIT--TFNICLVVHGTVSE 353 (366)
Q Consensus 329 ~~~~~~-----------~----d~i~--~~~~~~vv~G~~~~ 353 (366)
...+++ . .+++ ..++++++.++.+.
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~ 121 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD 121 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC
Confidence 322211 1 1233 36888888776664
No 54
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.08 E-value=4.6e-11 Score=107.05 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=71.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcCC--
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAP-- 330 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~~-- 330 (366)
++++++.|+|||+|.||+.++++|++.+ |.+++..+.+. ..|+. .++++.++|.++++. ++..++|.+...
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~---~~k~~-~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~ 77 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMS---PLKKH-HDFIDVQHRLTMIQMIIDELGFGDICDDEI 77 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBC---TTSCC-CSSCCCHHHHHHHHHHHHHHTCCEECCHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCC---CCCcC-CCCCCHHHHHHHHHHHHcCCCCEEEehHHh
Confidence 3689999999999999999999999987 99888776664 33543 578999999999884 677777777532
Q ss_pred ----CCchHHHHHH---cCCc---EEEECCCC
Q 017744 331 ----WEVTKDMITT---FNIC---LVVHGTVS 352 (366)
Q Consensus 331 ----~~~~~d~i~~---~~~~---~vv~G~~~ 352 (366)
...+.+.++. ..|+ ++|+|.|+
T Consensus 78 ~~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~ 109 (189)
T 2h29_A 78 KRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQ 109 (189)
T ss_dssp HHCSBCCHHHHHHHHHHHSTTEEEEEEEEHHH
T ss_pred cCCCCCCHHHHHHHHHHHCCCCcEEEEEecch
Confidence 2256666654 4466 99999764
No 55
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.07 E-value=1.2e-09 Score=107.04 Aligned_cols=128 Identities=21% Similarity=0.218 Sum_probs=81.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhh-----hhcCCCCCCcHHHHHHHHhc-CccccE-EE----e
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSG-LKWVDE-VI----A 134 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i-----~~~K~~pi~t~eER~~ll~~-~~~VD~-vv----~ 134 (366)
+++++.|+||++|.||..++++|.+.+|+|+|++.+++.. ...+.+..++.+||++|++. ++..+. +. .
T Consensus 3 ~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~~ 82 (365)
T 1lw7_A 3 KVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLV 82 (365)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEEE
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEec
Confidence 4789999999999999999999999999999999998742 11111234999999999984 344332 11 1
Q ss_pred cCCccc-----c--HHHHHHHhh--ccCccEEEEcCCCCCCCCCCchHHHHHhCC-eEEEec--c-CCCCCHHHHHHHH
Q 017744 135 NAPYAI-----T--EQFMNRLFN--EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRI 200 (366)
Q Consensus 135 ~~p~~~-----~--~eFl~~ll~--~l~~d~VV~G~D~~fg~~g~~~~~~lk~~g-~~~~v~--r-~~~vSST~Ir~rI 200 (366)
+.+... . .+.+..++. .++++.++.++++. .....+..+ ++..++ + ...||||.||+..
T Consensus 83 ~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 83 EDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp CSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred cCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 111111 0 122333444 46788777665541 112333443 344444 2 3579999999864
No 56
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.98 E-value=2.6e-09 Score=103.59 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=80.7
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc-c-----cc-EEEecCC
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-W-----VD-EVIANAP 137 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~-~-----VD-~vv~~~p 137 (366)
++++++.|+||++|.||..++++|.+.+|+++|++.+++.- .+..+.++.++|++|++..- . .. +++....
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d 84 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLAD 84 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCC
Confidence 36799999999999999999999999999999999886531 22346689999999999631 1 11 1222111
Q ss_pred c----cccHHHHHHHhhc---cCccEEEEcCCCCCCCCCCchHHHHHhCC--eEEEeccCCCCCHHHHHHHHHh
Q 017744 138 Y----AITEQFMNRLFNE---HKIDYIIHGDDPCLLPDGTDAYALAKKVG--RYKQIKRTEGVSSTDIVGRILS 202 (366)
Q Consensus 138 ~----~~~~eFl~~ll~~---l~~d~VV~G~D~~fg~~g~~~~~~lk~~g--~~~~v~r~~~vSST~Ir~rI~~ 202 (366)
+ ....+++++.+.+ +.++.+++|..- +...+ .+.... ....++....+|||.||+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~-----~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 85 YFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK-----DSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp CTTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS-----SSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHHHHhcccCCeEEEEcCCC-----Ccchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 1 1112444332211 235677777431 11222 222222 1223333457999999999985
No 57
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.97 E-value=4.5e-10 Score=108.94 Aligned_cols=60 Identities=17% Similarity=0.163 Sum_probs=51.5
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC 319 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~ 319 (366)
+++++++|||||+|.||++++++|++.+|.|+|+|.++.. .+.+ ++.++.+||++|++..
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~---~~~~-~~~~~~~~R~~m~~~~ 66 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFN---TPNI-KNPFSFEQRKQMIESD 66 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESC---CCCS-SSCSCHHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCC---Cccc-CCCCCHHHHHHHHHHH
Confidence 4789999999999999999999999999999999998753 2222 4678999999988864
No 58
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=98.96 E-value=7.5e-10 Score=98.60 Aligned_cols=92 Identities=18% Similarity=0.153 Sum_probs=67.5
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc-CCC----CcEEEcCCC
Q 017744 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV----DEVIIGAPW 331 (366)
Q Consensus 257 ~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~-~~V----d~Vvi~~~~ 331 (366)
+++++.|+|||+|.||+.++++|++.+|.++|++.++.. ..|. .++++.+||.++++.. ... +.+.+....
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d 79 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSI--RDPFTAGERVMMLTKALSENGIPASRYYIIPVQ 79 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCC--CCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecC
Confidence 589999999999999999999999999999999955432 2332 4678999999998864 444 466554322
Q ss_pred -----CchHHHHHHc--CCcEEEECCCC
Q 017744 332 -----EVTKDMITTF--NICLVVHGTVS 352 (366)
Q Consensus 332 -----~~~~d~i~~~--~~~~vv~G~~~ 352 (366)
....++++++ ++++++-|.++
T Consensus 80 ~~~~~~~w~~~~~~l~~~~~~~v~gr~~ 107 (181)
T 1ej2_A 80 DIECNALWVGHIKMLTPPFDRVYSGNPL 107 (181)
T ss_dssp CCSCHHHHHHHHHHHSCCCSEEECCCHH
T ss_pred ccCCHHHHHHHHHHHCCCCCEEEECCHH
Confidence 1334555553 67888888663
No 59
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.90 E-value=6.5e-11 Score=112.54 Aligned_cols=128 Identities=19% Similarity=0.189 Sum_probs=90.1
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhh-hcCC--CCCCcHHHHHHHHhcCccccEEEecCCcc-c
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIANAPYA-I 140 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~vv~~~p~~-~ 140 (366)
-..|.|+|+ +|.||+.||++|++.++.++|.+..++.-. +... +.+.+.++|+++++++ +||.++. .+++ +
T Consensus 19 i~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~-p~f~~m 93 (276)
T 1v8f_A 19 VGFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA-PGVEEM 93 (276)
T ss_dssp EEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC-CCHHHH
T ss_pred ceEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEe-CChHhC
Confidence 456889999 999999999999999999999998887532 2221 4689999999999997 7999986 2221 1
Q ss_pred c-HHHHHHHhhccCccEEEEcC----------------------C-CCCCCCCCchHHHHHhCCe-----EEEe--c--c
Q 017744 141 T-EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR-----YKQI--K--R 187 (366)
Q Consensus 141 ~-~eFl~~ll~~l~~d~VV~G~----------------------D-~~fg~~g~~~~~~lk~~g~-----~~~v--~--r 187 (366)
. ++|...++...+++.+++|. | ++||.++.+....+++.++ +.++ + +
T Consensus 94 ~p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr 173 (276)
T 1v8f_A 94 YPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVR 173 (276)
T ss_dssp SCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCB
T ss_pred CCcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEE
Confidence 1 12322111123455666676 8 9999999888888887653 2222 2 2
Q ss_pred ---CCCCCHHHHH
Q 017744 188 ---TEGVSSTDIV 197 (366)
Q Consensus 188 ---~~~vSST~Ir 197 (366)
+..+|||.|+
T Consensus 174 ~~dGlaiSSrnir 186 (276)
T 1v8f_A 174 EEDGLALSSRNVY 186 (276)
T ss_dssp CTTSCBCCGGGGG
T ss_pred cCCCCEeEEeEEE
Confidence 2358999986
No 60
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=98.90 E-value=2.7e-09 Score=93.85 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=64.7
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCC-cEEEcCCC----
Q 017744 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVD-EVIIGAPW---- 331 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd-~Vvi~~~~---- 331 (366)
++++.|+|||+|.||+.++++|++.+|.++|+|.+... ..|. .+.++.++|.++++. ++..+ ++.+....
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~ 77 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK--SHTL--ENPFTAGERILMITQSLKDYDLTYYPIPIKDIEF 77 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSC
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC--CCCC--CCCCCHHHHHHHHHHHHhcCCCceEEEeeCCccc
Confidence 68999999999999999999999999999999944322 2332 356799999999985 57776 56543211
Q ss_pred -CchHHHHHHc--CCcEEEECCC
Q 017744 332 -EVTKDMITTF--NICLVVHGTV 351 (366)
Q Consensus 332 -~~~~d~i~~~--~~~~vv~G~~ 351 (366)
....++++++ ..++++.|.+
T Consensus 78 ~~~w~~~~~~~~~~~~~~~~~~~ 100 (168)
T 1f9a_A 78 NSIWVSYVESLTPPFDIVYSGNP 100 (168)
T ss_dssp GGGHHHHHHHHSCCCSEEECCCH
T ss_pred HHHHHHHHHHhccCCCEEEECcH
Confidence 2345555443 4577776644
No 61
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.86 E-value=2.8e-09 Score=102.34 Aligned_cols=95 Identities=16% Similarity=0.062 Sum_probs=70.0
Q ss_pred EEEcCccccCChHHHHHHHHHHhcCCEE---EEEEecCchhhcccC-CCCCCCCHHHHHHHHHhcCCCCcEEEc---CCC
Q 017744 259 VYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIG---APW 331 (366)
Q Consensus 259 v~~~GsFD~~h~GHi~~L~~A~~~gd~L---iVgV~sD~~v~~~Kg-~~~pi~~~~eR~~~v~~~~~Vd~Vvi~---~~~ 331 (366)
|++-|+||.+|.||..+|++|++++|.+ .+.++-|+...-.++ +..|+++++||+++++++. ++.|+.. + .
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a-~ 79 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLDFFRIK-D 79 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEECHHHHT-T
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEEhHHhh-c
Confidence 6788999999999999999999998763 244444532111121 1268999999999999998 4344332 1 2
Q ss_pred CchHHHHHH--cCCcEEEECCCCCCC
Q 017744 332 EVTKDMITT--FNICLVVHGTVSETN 355 (366)
Q Consensus 332 ~~~~d~i~~--~~~~~vv~G~~~~~~ 355 (366)
....+|++. ++++++|.|.||..+
T Consensus 80 ls~~~Fi~~ill~~~~iVvG~Df~fG 105 (293)
T 1mrz_A 80 LTPEGFVERYLSGVSAVVVGRDFRFG 105 (293)
T ss_dssp CCHHHHHHHHCTTCCEEEEETTCCBS
T ss_pred CCHHHHHHHHhcCCCEEEECCCCCCC
Confidence 345788888 999999999999854
No 62
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=98.85 E-value=1.8e-09 Score=96.43 Aligned_cols=89 Identities=15% Similarity=0.117 Sum_probs=60.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCC--CcEEEcC---
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYV--DEVIIGA--- 329 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~V--d~Vvi~~--- 329 (366)
+++++++|||||+|.||+.+++ |.+.+|+|+++++.+ +..| ++.++.++|.+|++. ++.. +.+.+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~---~~~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIA---HAWG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCC---CCCC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4789999999999999999998 888889999999875 2333 578999999998886 4443 2455432
Q ss_pred -----C-CCchHHHHH---HcCCc---EEEECCC
Q 017744 330 -----P-WEVTKDMIT---TFNIC---LVVHGTV 351 (366)
Q Consensus 330 -----~-~~~~~d~i~---~~~~~---~vv~G~~ 351 (366)
. ...|.|.++ +..|+ +++.|.|
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D 108 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPD 108 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHH
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecc
Confidence 1 224444444 43444 5788866
No 63
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.84 E-value=7.8e-09 Score=101.15 Aligned_cols=98 Identities=17% Similarity=0.135 Sum_probs=76.5
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCE---EEEEEecCchhh----cccCCCCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF---LLVGIYTDQIVS----EHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~---LiVgV~sD~~v~----~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
..+|++-|+||.+|.||..+|++|++.++. ..|.++-|+.-. ..+.+ .++++++||.++++++. ||.|++.
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~-~~L~~~~eR~~ll~~~g-VD~v~v~ 92 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAP-LGITTLAERFALAESFG-IDGVLVI 92 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSC-CBSSCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCC-CCCCCHHHHHHHHHhcC-CCEEEEc
Confidence 357899999999999999999999998875 467777776322 12212 57999999999999986 9999885
Q ss_pred CCC-----CchHHHHHH-----cCCcEEEECCCCCCC
Q 017744 329 APW-----EVTKDMITT-----FNICLVVHGTVSETN 355 (366)
Q Consensus 329 ~~~-----~~~~d~i~~-----~~~~~vv~G~~~~~~ 355 (366)
.+. ....+|+++ ++++.+|.|.|+.-+
T Consensus 93 ~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG 129 (338)
T 2x0k_A 93 DFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFG 129 (338)
T ss_dssp CTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEES
T ss_pred cccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCC
Confidence 442 245678876 689999999999744
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.82 E-value=3.6e-09 Score=101.82 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=66.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc-CCC--CcEEEcCCCC
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV--DEVIIGAPWE 332 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~-~~V--d~Vvi~~~~~ 332 (366)
|+++++.|+|||+|.||+.++++|++.+|.++|+|.++.. ..|. ...++.++|..|++.. ... +++.+....+
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRV--AADT--RNPWRSPERMAMIEACLSPQILKRVHFLTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETC--CCCS--SSCSCHHHHHHHHHTTSCHHHHTTEEEEEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCccc--CCCC--CCCCCHHHHHHHHHHHhhhccCCeEEEEECCC
Confidence 5799999999999999999999999999999999988743 2222 2357999999999875 443 3344322222
Q ss_pred ch------HHH----HHHcC---CcEEEECCCCC
Q 017744 333 VT------KDM----ITTFN---ICLVVHGTVSE 353 (366)
Q Consensus 333 ~~------~d~----i~~~~---~~~vv~G~~~~ 353 (366)
.. .++ ++.+. +++++-|.+..
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~ 116 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKD 116 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCS
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCC
Confidence 21 333 33432 67888887664
No 65
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.72 E-value=9.8e-10 Score=104.71 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=80.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhh-hcCC--CCCCcHHHHHHHHhcCccccEEEecCCc-ccc-H
Q 017744 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIANAPY-AIT-E 142 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~vv~~~p~-~~~-~ 142 (366)
|.|+|. +|.||+.||++|++.++.++|.+..++.-. +... ..+.+.++++++++++ +||.++.. ++ ++. +
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~p-~~~~myp~ 102 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFHP-AVEDMYPG 102 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEECC-CHHHHSCS
T ss_pred EECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCCCC
Confidence 459997 999999999999999998888887776522 2121 4588999999999997 89999973 22 111 1
Q ss_pred HH--------HHH-HhhccCcc-------------EEEEcCCCCCCCCCCchHHHHHhCC
Q 017744 143 QF--------MNR-LFNEHKID-------------YIIHGDDPCLLPDGTDAYALAKKVG 180 (366)
Q Consensus 143 eF--------l~~-ll~~l~~d-------------~VV~G~D~~fg~~g~~~~~~lk~~g 180 (366)
+| +.+ +..+++|. .+|.|+|++||.++.+....+++++
T Consensus 103 ~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~ 162 (283)
T 3ag6_A 103 ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMV 162 (283)
T ss_dssp SCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHH
T ss_pred CceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHH
Confidence 23 111 22237888 8999999999999988888888755
No 66
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.63 E-value=3.6e-08 Score=92.45 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=59.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCE----EEEEEecCch-hhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEcC
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF----LLVGIYTDQI-VSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGA 329 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~----LiVgV~sD~~-v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~~ 329 (366)
++++++.|+|||+|.||+.++++|++.++. .+||+.-... .+..| .++++.++|.+|++. ++..+.+.+.+
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k---~~~~~~~~R~~m~~~ai~~~~~~~v~~ 82 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGK---KDLAASHHRVAMARLALQTSDWIRVDP 82 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSS---SCCCCHHHHHHHHHHHGGGCSSEEECC
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccC---CCCCCHHHHHHHHHHHhcCCCceEeeh
Confidence 578999999999999999999999988753 6665332222 12223 468999999998874 57777777743
Q ss_pred ------CCCchHHHHHHc
Q 017744 330 ------PWEVTKDMITTF 341 (366)
Q Consensus 330 ------~~~~~~d~i~~~ 341 (366)
.+..|.+.++.+
T Consensus 83 ~E~~~~~~syTidtL~~l 100 (252)
T 1nup_A 83 WESEQAQWMETVKVLRHH 100 (252)
T ss_dssp HHHHSSSCCCHHHHHHHH
T ss_pred HHhcCCCCCCHHHHHHHH
Confidence 234566666554
No 67
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.62 E-value=4e-08 Score=93.64 Aligned_cols=84 Identities=13% Similarity=0.186 Sum_probs=61.0
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCC-----EEEEEEecCchhhcccCCCCCCCCHHHHHHHHHh-cCCCCcEEEc
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLGD-----FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIG 328 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd-----~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vvi~ 328 (366)
.++++++.|+|||+|.||+.++++|++.++ .++|++..-...+..| .++++.++|++|++. +...+.+.+.
T Consensus 7 ~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K---~~l~s~~~R~~ml~~ai~~~~~~~v~ 83 (279)
T 1kqn_A 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK---KGLIPAYHRVIMAELATKNSKWVEVD 83 (279)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC---TTCCCHHHHHHHHHHHTTTCSSEEEC
T ss_pred CceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccc---cCCCCHHHHHHHHHHHhcCCCcEEEe
Confidence 357899999999999999999999998774 3666553322223334 468999999999985 5788888886
Q ss_pred CC------CCchHHHHHHc
Q 017744 329 AP------WEVTKDMITTF 341 (366)
Q Consensus 329 ~~------~~~~~d~i~~~ 341 (366)
.. +..|.+.++.+
T Consensus 84 ~~E~~~~~~syTidtL~~l 102 (279)
T 1kqn_A 84 TWESLQKEWKETLKVLRHH 102 (279)
T ss_dssp CTGGGCSSCCCHHHHHHHH
T ss_pred ccccccCCCCcHHHHHHHH
Confidence 32 44566655443
No 68
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.58 E-value=7.2e-08 Score=93.10 Aligned_cols=98 Identities=18% Similarity=0.174 Sum_probs=73.5
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEE---EEEEecCch----hhc--ccCCCCCCCCHHHHHHHHHhcCCCCcEE
Q 017744 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQI----VSE--HRGSYHPIMHLHERSLSVLACRYVDEVI 326 (366)
Q Consensus 256 ~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~L---iVgV~sD~~----v~~--~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vv 326 (366)
...|++-|+||-+|.||..+|++|++.++.+ .|.++-|+- .+. .+.+ .++++++||.++++++. ||.++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~-~~Lt~~~eK~~ll~~lG-VD~v~ 97 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLF-LHILNPAERERKLKREG-VEELY 97 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGG-CBSSCHHHHHHHHHHHT-CCEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCc-ccCCCHHHHHHHHHHcC-CCEEE
Confidence 4579999999999999999999999988753 444554532 111 0112 57999999999999998 99999
Q ss_pred EcCCC-----CchHHHH----HHcCCcEEEECCCCCCC
Q 017744 327 IGAPW-----EVTKDMI----TTFNICLVVHGTVSETN 355 (366)
Q Consensus 327 i~~~~-----~~~~d~i----~~~~~~~vv~G~~~~~~ 355 (366)
+..+. ....+|+ ++++++.+|-|.||.-+
T Consensus 98 ~~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG 135 (308)
T 3op1_A 98 LLDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFG 135 (308)
T ss_dssp EECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBT
T ss_pred EecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCC
Confidence 86542 2234544 47899999999998643
No 69
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.50 E-value=1.7e-07 Score=89.27 Aligned_cols=71 Identities=15% Similarity=0.279 Sum_probs=55.9
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecC--chhhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTD--QIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD--~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
+++++++ |+||-+|.||+.+|++|++.+|.+||++..+ ++........+ ..++++|.++++++. ||.|++.
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~y-p~tle~d~~lL~~~G-VD~vf~p 93 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERY-PRDFERDRKLLEKEN-VDCIFHP 93 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGS-CCCHHHHHHHHHTTT-CSEEECC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccC-CCCHHHHHHHHHHCC-CCEEEeC
Confidence 4567777 8999999999999999999999999999544 43322211213 458999999999998 9988874
No 70
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.47 E-value=1.1e-08 Score=98.16 Aligned_cols=111 Identities=15% Similarity=0.170 Sum_probs=76.5
Q ss_pred EEEecccCcCCHHHHHHHHHHHH-hCCeeEEEEccchhhhhcCC---CCCCcHHHHHHHHhcCccccEEEecCCc-ccc-
Q 017744 68 VYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPY-AIT- 141 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~-lgd~LvVgv~sd~~i~~~K~---~pi~t~eER~~ll~~~~~VD~vv~~~p~-~~~- 141 (366)
|.+..++..+|.||+.||++|++ .++.++|.+..++.-...+. ..+.+.++++++++++ +||.++.. ++ ++.
T Consensus 35 vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~p-~~~~myP 112 (301)
T 3cov_A 35 VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFTP-TTAAMYP 112 (301)
T ss_dssp EEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEECC-CHHHHCT
T ss_pred EEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCCC
Confidence 44444444599999999999999 89988888877764222111 3578999999999997 89999972 22 111
Q ss_pred HHHHHHHhhccCccEEEEcC-----------------------CCCCCCCCCchHHHHHhCCe
Q 017744 142 EQFMNRLFNEHKIDYIIHGD-----------------------DPCLLPDGTDAYALAKKVGR 181 (366)
Q Consensus 142 ~eFl~~ll~~l~~d~VV~G~-----------------------D~~fg~~g~~~~~~lk~~g~ 181 (366)
++|...+... ++..+++|. |+.||.++.+....++++++
T Consensus 113 ~~f~~~v~~~-~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~ 174 (301)
T 3cov_A 113 DGLRTTVQPG-PLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVA 174 (301)
T ss_dssp TCSCSEEECC-GGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH
T ss_pred CCceEEEecC-CcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHH
Confidence 1232211111 345667777 99999999988888887653
No 71
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.39 E-value=1.2e-06 Score=86.21 Aligned_cols=90 Identities=16% Similarity=0.283 Sum_probs=70.8
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCch--hhcccCCCCCCCCHHHHHHHHHhcCCCCcEEEcCCC-
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI--VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPW- 331 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~--v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi~~~~- 331 (366)
++++|.+=|.||+||.||..+|++|++ .+ ++++|.+-.. +. +|. ..+++.++|.++++.+ .||.|+..++.
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~-~~l~~~~~R~~~~~~~-GvD~vielpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGI-PYFLNRYIRAEMAIRA-GADIVVEGPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSS-BCSSCHHHHHHHHHHH-TCSEEEECCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCC-CcCCCHHHHHHHHHHC-CCCEEEEcCchh
Confidence 457899999999999999999999999 55 6777766433 33 444 5789999999999998 79998886541
Q ss_pred -CchHHHHH-------HcCCcEEEECC
Q 017744 332 -EVTKDMIT-------TFNICLVVHGT 350 (366)
Q Consensus 332 -~~~~d~i~-------~~~~~~vv~G~ 350 (366)
....+|++ +++++.+|.|.
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 23456655 58999999998
No 72
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.28 E-value=4.2e-06 Score=82.07 Aligned_cols=133 Identities=16% Similarity=0.122 Sum_probs=84.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc-cc---cEEE-ecCCccc
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEVI-ANAPYAI 140 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~-~V---D~vv-~~~p~~~ 140 (366)
++|++.|+||++|.||..+.++|.+..|.|++-..-. ..| +--.+.+.|+++++.+- .. +.++ ...|+++
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 230 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHh
Confidence 3578899999999999999999999999776655432 223 45688999999998631 11 1122 2233433
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC--CCCCCCchHHHH-HhC---C-eEEEecc--------------------
Q 017744 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC--LLPDGTDAYALA-KKV---G-RYKQIKR-------------------- 187 (366)
Q Consensus 141 ~-----~eFl~~ll-~~l~~d~VV~G~D~~--fg~~g~~~~~~l-k~~---g-~~~~v~r-------------------- 187 (366)
. +..+..++ +.+++.++++|.|.. ...-++..++.+ +.. + ++..+++
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~p~~~ 310 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTCPEGH 310 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTSCGGG
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEccccCccC
Confidence 1 34455544 447999999999974 222223333333 332 1 2222111
Q ss_pred ---CCCCCHHHHHHHHHhc
Q 017744 188 ---TEGVSSTDIVGRILSS 203 (366)
Q Consensus 188 ---~~~vSST~Ir~rI~~~ 203 (366)
...+|||+||+++.++
T Consensus 311 ~~~~~~ISgT~iR~~L~~G 329 (349)
T 1v47_A 311 REKRTAISMTKVRALLREG 329 (349)
T ss_dssp GGGCEECCHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHCc
Confidence 1248999999999877
No 73
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.24 E-value=8.8e-06 Score=81.03 Aligned_cols=133 Identities=16% Similarity=0.079 Sum_probs=82.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHhC--CeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc-cc---cEE-EecCCc
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPY 138 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~lg--d~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~-~V---D~v-v~~~p~ 138 (366)
++|++.|+||++|.||..++++|.+.. |.|++-..-. ..| +--.+.+.|+++++.+- .. +.+ +...|+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~ 267 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGF 267 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechH
Confidence 358889999999999999999999987 7665544422 223 44578999999988631 11 111 111223
Q ss_pred cc-----cHHHHHHHh-hccCccEEEEcCCCC--CCCCCCchHH-HHHhC------C-eEEEecc---------------
Q 017744 139 AI-----TEQFMNRLF-NEHKIDYIIHGDDPC--LLPDGTDAYA-LAKKV------G-RYKQIKR--------------- 187 (366)
Q Consensus 139 ~~-----~~eFl~~ll-~~l~~d~VV~G~D~~--fg~~g~~~~~-~lk~~------g-~~~~v~r--------------- 187 (366)
++ ++..+..++ +.+++.++++|.|.. ...-++..++ .++.. + ++..+++
T Consensus 268 ~m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~~ 347 (396)
T 1jhd_A 268 DMLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMRD 347 (396)
T ss_dssp CCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGGG
T ss_pred HhhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCeEEEccc
Confidence 22 133344444 457999999999984 2223333333 44432 2 3333221
Q ss_pred --------CCCCCHHHHHHHHHhc
Q 017744 188 --------TEGVSSTDIVGRILSS 203 (366)
Q Consensus 188 --------~~~vSST~Ir~rI~~~ 203 (366)
...||||+||+++.++
T Consensus 348 ~p~~~~~~~~~ISgT~IR~~L~~G 371 (396)
T 1jhd_A 348 VPDHTKEDFVLLSGTKVREMLGQG 371 (396)
T ss_dssp CTTCCGGGEECCCHHHHHHHHHTT
T ss_pred cCcccCCCccccCHHHHHHHHHCC
Confidence 0249999999999877
No 74
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.54 E-value=0.00012 Score=69.59 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=55.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhhh-hcCC--CCCCcHHHHHHHHhcCccccEEEe
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i~-~~K~--~pi~t~eER~~ll~~~~~VD~vv~ 134 (366)
+|-+..+..++|.||+.|+++|++.++.++|.+..++.-. +... +...+.++++++++.+ +||.++.
T Consensus 23 ~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 23 RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 4678889999999999999999999998888887766431 1222 5688999999999997 8998875
No 75
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=97.03 E-value=0.0014 Score=62.99 Aligned_cols=65 Identities=23% Similarity=0.255 Sum_probs=51.0
Q ss_pred eEEE--EecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhh-hhcCC--CCCCcHHHHHHHHhcCccccEEEe
Q 017744 66 VRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (366)
Q Consensus 66 ~~V~--~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i-~~~K~--~pi~t~eER~~ll~~~~~VD~vv~ 134 (366)
++++ |+| .+|.||+.|+++|++.+|.++|.+.-++.= .+... ...-+.++.+++++.. +||.|+.
T Consensus 44 ~IgfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 44 KIGFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp CEEEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEEC
T ss_pred eEEEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEEC
Confidence 3566 778 599999999999999999999888776642 12222 4567889999999997 8998875
No 76
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=96.85 E-value=0.0029 Score=59.94 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=51.9
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccC-CCCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg-~~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
.|.+-|. +|.||..++++|++.+|.++|.+..|+.---... ..+...++++|.+.++++. ||.|+..
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~p 88 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFAP 88 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEECC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEeC
Confidence 4566777 9999999999999999999999998864321111 1135789999999999975 8888764
No 77
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.48 E-value=0.0019 Score=61.29 Aligned_cols=61 Identities=21% Similarity=0.220 Sum_probs=46.9
Q ss_pred eEEE--EecccCcCCHHHHHHHHHHHHhCCeeEEEEccchh-------hhhcCCCCCCcHHHHHHHHhcCccccEEEe
Q 017744 66 VRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE-------IIANKGPPVLSMEERLALVSGLKWVDEVIA 134 (366)
Q Consensus 66 ~~V~--~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~-------i~~~K~~pi~t~eER~~ll~~~~~VD~vv~ 134 (366)
++++ |+|+ +|.||..|+++|++.+|.++|.+.-++. ..+| --+.++=+++++.. +||.|+.
T Consensus 26 ~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~Y----PRtle~D~~~l~~~-gvd~vF~ 95 (287)
T 3q12_A 26 RIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHY----PRTLQEDCEKLTRH-GADLVFA 95 (287)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHS----CCCHHHHHHHHHHH-TCSEEEC
T ss_pred eEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcC----CCCHHHHHHHHHHC-CCCEEEC
Confidence 4566 8897 9999999999999999999999875553 2222 23567777788876 8998875
No 78
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.18 E-value=0.016 Score=55.04 Aligned_cols=70 Identities=14% Similarity=0.229 Sum_probs=51.5
Q ss_pred CCeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCC-CCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGS-YHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 255 ~~~~v~--~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~-~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
++++++ +-|. +|.||..++++|++.+|.+||.+..++.---.... .....+++++.+.++++. ||.|+..
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~p 94 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFHP 94 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEECC
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeC
Confidence 345655 6675 99999999999999999999999877532111110 123678999999998875 8877763
No 79
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.96 E-value=0.0078 Score=57.15 Aligned_cols=37 Identities=24% Similarity=0.579 Sum_probs=32.2
Q ss_pred CCeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCc
Q 017744 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQ 294 (366)
Q Consensus 255 ~~~~v~--~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~ 294 (366)
++++++ +-|. +|.||+.++++|++.+|.+||+|.-|+
T Consensus 24 g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP 62 (287)
T 3q12_A 24 GKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNP 62 (287)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCG
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCc
Confidence 467888 5575 999999999999999999999998664
No 80
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=95.71 E-value=0.025 Score=56.12 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=59.9
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc-C-CCCc--EEE--c
Q 017744 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-R-YVDE--VII--G 328 (366)
Q Consensus 257 ~~v~~~GsFD~~h~GHi~~L~~A~~~g--d~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~-~-~Vd~--Vvi--~ 328 (366)
+.|+--|||||+|.||..+.++|.+.. |.|++--.-. ..| .--.+.+.|+++++.+ + +.+. |++ .
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K---~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~ 265 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK---KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGY 265 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC---TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC---CCCCCHHHHHHHHHHHHHhcCCCcceEEEec
Confidence 345569999999999999999999887 8665444322 233 3567999999888876 3 2233 332 1
Q ss_pred -CC---CCchH----H-HHHHcCCcEEEECCCCCC
Q 017744 329 -AP---WEVTK----D-MITTFNICLVVHGTVSET 354 (366)
Q Consensus 329 -~~---~~~~~----d-~i~~~~~~~vv~G~~~~~ 354 (366)
.+ -+.+. . +-+.++++.+|-|.|..+
T Consensus 266 p~~m~~aGPreailhaiirkn~G~t~fIVGrDhag 300 (396)
T 1jhd_A 266 GFDMLYAGPREAVLHAYFRQNMGATHFIIGRDHAG 300 (396)
T ss_dssp ECCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTTC
T ss_pred hHHhhcCCchHHHHHHHHHHcCCCcEEEECCCCCC
Confidence 11 12221 1 224459999999998863
No 81
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=95.32 E-value=0.028 Score=53.24 Aligned_cols=61 Identities=21% Similarity=0.281 Sum_probs=44.6
Q ss_pred EEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchhh-hhcCC--CCCCcHHHHHHHHhcCccccEEEe
Q 017744 69 YMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (366)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~i-~~~K~--~pi~t~eER~~ll~~~~~VD~vv~ 134 (366)
=|+|. +|-||..|+++|++ +|.++|.+.-++.= .+... ..--+.++=+++++.. +||.++.
T Consensus 31 PTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 31 PTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp EECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 37775 99999999999999 99988887665531 11111 2344677777888886 8998875
No 82
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=95.29 E-value=0.034 Score=53.18 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=47.4
Q ss_pred CccccCChHHHHHHHHHHh-cCCEEEEEEecCchhhcccCC-CCCCCCHHHHHHHHHhcCCCCcEEEc
Q 017744 263 GAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGS-YHPIMHLHERSLSVLACRYVDEVIIG 328 (366)
Q Consensus 263 GsFD~~h~GHi~~L~~A~~-~gd~LiVgV~sD~~v~~~Kg~-~~pi~~~~eR~~~v~~~~~Vd~Vvi~ 328 (366)
.|+.-+|.||+.++++|++ .+|.+||.+..++.---.+.. .....+++++.++++++. ||.|+..
T Consensus 39 pTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~p 105 (301)
T 3cov_A 39 PTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFTP 105 (301)
T ss_dssp EECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEECC
T ss_pred ecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeC
Confidence 3444499999999999999 999999999877532111110 013668999999988875 8877763
No 83
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=95.02 E-value=0.022 Score=53.99 Aligned_cols=66 Identities=24% Similarity=0.371 Sum_probs=42.0
Q ss_pred CCeEEEEc--CccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCC---CCCCCCHHHHHHHHHhcCCCCcEEE
Q 017744 255 NARVVYID--GAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGS---YHPIMHLHERSLSVLACRYVDEVII 327 (366)
Q Consensus 255 ~~~~v~~~--GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~---~~pi~~~~eR~~~v~~~~~Vd~Vvi 327 (366)
+++++++| |. +|.||+.++++|++ +|.+||.|.-|+.=- ..+. .+|= ++++=...+++. .||-|..
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF-~~~EDl~~YPR-tle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQF-GPNEDFSSYPR-DLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGC-CTTSCTTTSCC-CHHHHHHHHHHT-TCSEEEC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCcccc-CCchhhhcCCC-CHHHHHHHHHHC-CCCEEEC
Confidence 45677755 54 99999999999999 999999998664310 0000 0222 455545555554 5774443
No 84
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=94.72 E-value=0.089 Score=50.46 Aligned_cols=68 Identities=21% Similarity=0.296 Sum_probs=46.3
Q ss_pred CCeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhccc-CCCCCCCCHHHHHHHHHhcCCCCcEE
Q 017744 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHR-GSYHPIMHLHERSLSVLACRYVDEVI 326 (366)
Q Consensus 255 ~~~~v~--~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~K-g~~~pi~~~~eR~~~v~~~~~Vd~Vv 326 (366)
++++++ +-|. +|.||+.++++|++.+|.+||.|..|+.=-... .-.+.--++++..+++++. .||-|.
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF 112 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLF 112 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEE
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEE
Confidence 567888 5574 999999999999999999999998764311000 0001233677777777766 477554
No 85
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=94.62 E-value=0.043 Score=53.53 Aligned_cols=89 Identities=13% Similarity=0.056 Sum_probs=60.6
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc-C-CCCc--EEEc-CCC-
Q 017744 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-R-YVDE--VIIG-APW- 331 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~-~-~Vd~--Vvi~-~~~- 331 (366)
.|+--|||||+|.||..+.++|.+..|.|++--.-. ..| .--.+.+.|+++++.+ + +.+. |++. .+.
T Consensus 157 ~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K---~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~ 229 (349)
T 1v47_A 157 KVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK---PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATP 229 (349)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC---TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSC
T ss_pred eEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC---CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHH
Confidence 344589999999999999999999999877654322 334 3568999999888876 3 3233 4442 111
Q ss_pred ----Cc----hHHHH-HHcCCcEEEECCCCC
Q 017744 332 ----EV----TKDMI-TTFNICLVVHGTVSE 353 (366)
Q Consensus 332 ----~~----~~d~i-~~~~~~~vv~G~~~~ 353 (366)
+. ....+ +.++++.+|-|.|..
T Consensus 230 m~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 230 MRYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 11 12212 345999999999876
No 86
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=94.52 E-value=0.23 Score=49.14 Aligned_cols=94 Identities=17% Similarity=0.170 Sum_probs=57.1
Q ss_pred eEEEEecccCcCCHHHHHHH-HHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 017744 66 VRVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL-~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vv~-~~p~~~ 140 (366)
++|++..+++++|.||..++ +.|.+.++.|++ ++ .+-..| +-=.+.+-|++..+.+. --+.+++ ..|+.+
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~~lll--hP--lvG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~m 262 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLI--HP--VVGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 262 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBC
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCCcEEE--EE--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecchhh
Confidence 35889999999999996555 455555664443 33 111122 23468899988877642 1222332 233332
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC
Q 017744 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 141 ~-----~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
- +..+..++ +.++|.++++|-|..
T Consensus 263 ryAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 263 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hhcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 1 34455555 458999999999974
No 87
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=94.32 E-value=0.054 Score=50.69 Aligned_cols=62 Identities=16% Similarity=0.302 Sum_probs=44.9
Q ss_pred EEEecccCcCCHHHHHHHHHHHHhCCeeEEEEccchh-------hhhcCCCCCCcHHHHHHHHhcCccccEEEe
Q 017744 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE-------IIANKGPPVLSMEERLALVSGLKWVDEVIA 134 (366)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qAk~lgd~LvVgv~sd~~-------i~~~K~~pi~t~eER~~ll~~~~~VD~vv~ 134 (366)
+-..-+--.+|-||..|+++|++.+|.++|.+.-++. ..+| --+.++=+++++.. +||.++.
T Consensus 26 ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~Y----PRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 26 IGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTY----PNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHS----CCCHHHHHHHHHHT-TCSEEEC
T ss_pred EEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcC----CCCHHHHHHHHHHC-CCCEEEC
Confidence 4444455589999999999999999988888865542 2222 23566667778876 8998775
No 88
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=94.27 E-value=0.51 Score=48.25 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=58.5
Q ss_pred eEEEEecccCcCCHHHHHHH-HHHHHhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 017744 66 VRVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL-~qAk~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vv~-~~p~~~ 140 (366)
++|++..+++++|.||..++ +.|.+.++.|++-..-- ..| +-=.+.+-|++..+.+. --+.++. ..|+.+
T Consensus 189 ~~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~g----~~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m 263 (511)
T 1g8f_A 189 DRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVG----LTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 263 (511)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBCS----BCS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBC
T ss_pred CcEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECCC----CCC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecchhh
Confidence 35888999999999996555 55666577555433321 122 23468899988887642 1222332 234433
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC
Q 017744 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 141 ~-----~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
- +..++.++ +.|+|.++++|-|+.
T Consensus 264 ~yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 264 RMSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred hccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 2 34455555 458999999999974
No 89
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=94.04 E-value=0.11 Score=49.10 Aligned_cols=71 Identities=18% Similarity=0.272 Sum_probs=50.7
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCchhhcc-cCCCCCCCCHHHHHHHHHhcCCCCcEEE
Q 017744 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVII 327 (366)
Q Consensus 255 ~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~~v~~~-Kg~~~pi~~~~eR~~~v~~~~~Vd~Vvi 327 (366)
+++++++| |..-+|.||+.++++|++.+|.++|.+..++.--.. ....+...+++++..+++++ .||.|..
T Consensus 21 g~~ig~VP-TMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 21 QNRTAFVP-TMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp CSSCEEEE-ECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred CCeEEEEC-CCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 44566554 778899999999999999999999999877542110 00113456888888888776 4776554
No 90
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=93.02 E-value=0.065 Score=50.15 Aligned_cols=40 Identities=23% Similarity=0.615 Sum_probs=32.6
Q ss_pred CCCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCc
Q 017744 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQ 294 (366)
Q Consensus 254 ~~~~~v~~~GsFD~~h~GHi~~L~~A~~~gd~LiVgV~sD~ 294 (366)
.+++++++| |---+|.||+.++++|++.+|.+||.|.-|+
T Consensus 22 ~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP 61 (264)
T 3n8h_A 22 KQQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVNP 61 (264)
T ss_dssp TTSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCCG
T ss_pred CCCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccCc
Confidence 356777776 2336999999999999999999999998663
No 91
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=89.79 E-value=1 Score=46.50 Aligned_cols=94 Identities=18% Similarity=0.139 Sum_probs=57.9
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHh-CCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAKAL-GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk~l-gd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vv~-~~p~~~ 140 (366)
++|++.=+++++|.||..++++|... ++.|+|-+.-- ..| +-=.+.+-|++-++.+. --+.++. ..|..+
T Consensus 191 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl~g----~~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 191 SRVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPVVG----LTK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCBCC----CCC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred CeEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeCCC----CCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 35788999999999999999998865 77555432111 112 22357888888877641 1123333 123221
Q ss_pred --c---HHHHHHHh-hccCccEEEEcCCCC
Q 017744 141 --T---EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 141 --~---~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
. +..+..++ +.++|..+++|-|+.
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrdha 295 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRDHA 295 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTTTT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCCCC
Confidence 1 23344433 568999999998863
No 92
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=89.39 E-value=1.4 Score=45.20 Aligned_cols=93 Identities=19% Similarity=0.218 Sum_probs=59.2
Q ss_pred EEEEecccCcCCHHHHHHHHHHHH-hCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcC----ccccEEEe-cCCccc
Q 017744 67 RVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL----KWVDEVIA-NAPYAI 140 (366)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qAk~-lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~----~~VD~vv~-~~p~~~ 140 (366)
+|++.=++.++|.||..++++|.. .++.|+|-+.-- ..| .-=.+.+-|++-++.+ ---+.++. ..|...
T Consensus 165 ~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g----~~k-~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~m 239 (546)
T 2gks_A 165 KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVG----LTK-PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAM 239 (546)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCS----BCC-TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCBC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcC----CCC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCchh
Confidence 588899999999999999999986 677665532211 112 2346788898888764 11122322 223222
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC
Q 017744 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 141 ~-----~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
. +.-+..++ +.++|..+++|-|+.
T Consensus 240 ~~agprea~~ha~ir~n~G~th~ivgrdha 269 (546)
T 2gks_A 240 RMAGPREALWHGIIRRNYGATHFIVGRDHA 269 (546)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hccCchHHHHHHHHHHhCCCCeEEECCCCC
Confidence 1 33344444 568999999998863
No 93
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=87.19 E-value=7 Score=40.85 Aligned_cols=95 Identities=16% Similarity=0.074 Sum_probs=59.4
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHH-hCC------eeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc-----cccEE
Q 017744 65 RVRVYMDGCFDLMHYGHANALRQAKA-LGD------ELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-----WVDEV 132 (366)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qAk~-lgd------~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~-----~VD~v 132 (366)
-++|++.=+-+++|.||..|++.|.+ .+| .|.+ |+ .+-..| +-=.+.+-|++..+.+- --+.+
T Consensus 412 w~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll--~p--l~G~tk-~~di~~~~r~~~~~~~~~~~y~p~~~~ 486 (630)
T 1x6v_B 412 ADAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLL--HP--LGGWTK-DDDVPLMWRMKQHAAVLEEGVLNPETT 486 (630)
T ss_dssp CSEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEE--EE--BCSCCC-TTSCCHHHHHHHHHHHHHTTSSCGGGE
T ss_pred CCeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEE--Ee--CcCCCC-CCCCCHHHHHHHHHHHHHcCCCCCcce
Confidence 34688888999999999999999986 344 2333 32 111112 33467888888777641 12334
Q ss_pred Ee-cCCcccc-----HHHHHHHh-hccCccEEEEcCCCC
Q 017744 133 IA-NAPYAIT-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 133 v~-~~p~~~~-----~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
++ ..|+.+- +..+..++ +.++|.++++|-|+.
T Consensus 487 ~l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 487 VVAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp EECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred EEeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 43 2233222 34455555 458999999999984
No 94
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=84.36 E-value=7.3 Score=39.96 Aligned_cols=94 Identities=7% Similarity=0.021 Sum_probs=55.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHH-HhCCeeEEEEccchhhhhcCCCCCCcHHHHHHHHhcCc---cccEEEe-cCCccc
Q 017744 66 VRVYMDGCFDLMHYGHANALRQAK-ALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI 140 (366)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qAk-~lgd~LvVgv~sd~~i~~~K~~pi~t~eER~~ll~~~~---~VD~vv~-~~p~~~ 140 (366)
++|++.=+-+++|.||..++++|. +.++.|++ ++ .+-..| +-=.+.+-|++..+.+. --+.++. -.|+.+
T Consensus 164 ~~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll--~p--l~g~~k-~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~m 238 (552)
T 3cr8_A 164 RRIIAWQARQPMHRAQYEFCLKSAIENEANLLL--HP--QVGGDI-TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAPP 238 (552)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCCCT-TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSCC
T ss_pred CceEEEecCCCCchHHHHHHHHHHHhcCCeEEE--Ee--ccCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEeecchhh
Confidence 357888999999999999999998 66774443 33 111112 33467788888777641 1222332 234332
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC
Q 017744 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC 164 (366)
Q Consensus 141 ~-----~eFl~~ll-~~l~~d~VV~G~D~~ 164 (366)
- +..+..++ +.|+|..+++|-|+.
T Consensus 239 ~~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 239 PEASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp CCSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred cccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 1 44455555 458999999999874
No 95
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=74.28 E-value=10 Score=38.75 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=58.6
Q ss_pred EEEcCccccCChHHHHHHHHHHh-cCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc--CCC--CcEEEcCC---
Q 017744 259 VYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV--DEVIIGAP--- 330 (366)
Q Consensus 259 v~~~GsFD~~h~GHi~~L~~A~~-~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V--d~Vvi~~~--- 330 (366)
|+--=|++|+|.||..++++|+. .+|.|+|-.. +-..| ..=++.+-|+..++.+ .|. +.|++...
T Consensus 166 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~----~g~~k---~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~ 238 (546)
T 2gks_A 166 IVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPV----VGLTK---PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLA 238 (546)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCB----CSBCC---TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCB
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeC----cCCCC---CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCch
Confidence 44466799999999999999986 7887766432 21223 2356999999888877 232 44555321
Q ss_pred -------CCchHH-HHHHcCCcEEEECCCCCCC
Q 017744 331 -------WEVTKD-MITTFNICLVVHGTVSETN 355 (366)
Q Consensus 331 -------~~~~~d-~i~~~~~~~vv~G~~~~~~ 355 (366)
+.+... +-+.++++-+|-|.|+.+.
T Consensus 239 m~~agprea~~ha~ir~n~G~th~ivgrdhag~ 271 (546)
T 2gks_A 239 MRMAGPREALWHGIIRRNYGATHFIVGRDHASP 271 (546)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCC
T ss_pred hhccCchHHHHHHHHHHhCCCCeEEECCCCCCC
Confidence 112222 3366799988889776544
No 96
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=70.66 E-value=6.8 Score=40.34 Aligned_cols=90 Identities=14% Similarity=0.083 Sum_probs=57.3
Q ss_pred EEEcCccccCChHHHHHHHHHHh-cCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc--CCC-CcEEEcC-CCC-
Q 017744 259 VYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIGA-PWE- 332 (366)
Q Consensus 259 v~~~GsFD~~h~GHi~~L~~A~~-~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V-d~Vvi~~-~~~- 332 (366)
|+--=|++|+|.||..++++|+. .+|.|+|-.. +-..| ..=++.+-|+...+.+ .|- +.|++.. |..
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl----~g~~k---~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLIHPV----VGLTK---PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CCCCC---TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeC----CCCCC---CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 44467799999999999998885 4886666421 11223 2346889999888886 342 3355532 111
Q ss_pred ----c-----hHHHHHHcCCcEEEECCCCCCC
Q 017744 333 ----V-----TKDMITTFNICLVVHGTVSETN 355 (366)
Q Consensus 333 ----~-----~~d~i~~~~~~~vv~G~~~~~~ 355 (366)
. -.-+.+.++++.+|-|-|+.+.
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrdhag~ 297 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRDHAGP 297 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTTTTCC
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCCCCCC
Confidence 1 1224556799999999776543
No 97
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=59.81 E-value=40 Score=33.08 Aligned_cols=91 Identities=13% Similarity=0.099 Sum_probs=56.7
Q ss_pred EEEEcCccccCChHHHHHHHHHH-hcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc--CCC-CcEEEcCC-C-
Q 017744 258 VVYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIGAP-W- 331 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~-~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V-d~Vvi~~~-~- 331 (366)
.|+--.|++|+|.||.+++.+++ +.+|-|+|- ..+-..| .-=++.+-|+...+.+ .|. +.|++... .
T Consensus 189 ~VvafqtrNP~HraH~e~~~r~a~e~~~~lllh----PlvG~tK---~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~ 261 (395)
T 1r6x_A 189 RVVAFQTRNPMHRAHRELTVRAAREANAKVLIH----PVVGLTK---PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 261 (395)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHTTCEEEEC----CBCSBCC---TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCB
T ss_pred cEEEeccCCCcchhhHHHHHHHHHHcCCcEEEE----ECCCCCC---CCCCCHHHHHHHHHHHHHhCCCccEEEEecchh
Confidence 45557899999999977666554 557744432 2232333 2457999999888887 342 23554221 1
Q ss_pred ----Cc----hHH-HHHHcCCcEEEECCCCCCC
Q 017744 332 ----EV----TKD-MITTFNICLVVHGTVSETN 355 (366)
Q Consensus 332 ----~~----~~d-~i~~~~~~~vv~G~~~~~~ 355 (366)
+. .-- +-+.++++.+|-|-|..+.
T Consensus 262 mryAGPrEai~HAiiRkN~GcthfIVGRDhAG~ 294 (395)
T 1r6x_A 262 MRMSGDREAVWHAIIRKNYGASHFIVGRDHAGP 294 (395)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCSEEEECTTTTCC
T ss_pred hhhcCcHHHHHHHHHHHHcCCceEEECCCCCCC
Confidence 11 112 3445799999999988764
No 98
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=52.10 E-value=34 Score=34.71 Aligned_cols=91 Identities=14% Similarity=0.114 Sum_probs=56.9
Q ss_pred EEEEcCccccCChHHHHHHHHHH-hcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc--CCC-CcEEEc-CCCC
Q 017744 258 VVYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-APWE 332 (366)
Q Consensus 258 ~v~~~GsFD~~h~GHi~~L~~A~-~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V-d~Vvi~-~~~~ 332 (366)
.|+--.|++|+|.||.+++.+++ +.+|-|+|--. +-..| .-=++.+-|++..+.+ .|. +.|++. -|..
T Consensus 190 ~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl----~g~~k---~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~ 262 (511)
T 1g8f_A 190 RVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV----VGLTK---PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLA 262 (511)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEB----CSBCS---TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCB
T ss_pred cEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEEC----CCCCC---CCCCCHHHHHHHHHHHHHhCCcccEEEEecchh
Confidence 35557799999999977766554 55775544322 22223 2457999999888887 342 335542 1111
Q ss_pred -----c----hHH-HHHHcCCcEEEECCCCCCC
Q 017744 333 -----V----TKD-MITTFNICLVVHGTVSETN 355 (366)
Q Consensus 333 -----~----~~d-~i~~~~~~~vv~G~~~~~~ 355 (366)
. .-- +-+.++++.+|-|-|+.+.
T Consensus 263 m~yaGprea~~hai~r~n~G~th~IvGrdhAg~ 295 (511)
T 1g8f_A 263 MRMSGDREAVWHAIIRKNYGASHFIVGRDHAGP 295 (511)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCSEEECCTTTTCC
T ss_pred hhccCcHHHHHHHHHHHhCCCceEEeCCCCCCC
Confidence 1 112 3455799999999988764
No 99
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=42.36 E-value=59 Score=33.15 Aligned_cols=91 Identities=18% Similarity=0.181 Sum_probs=53.4
Q ss_pred eEEEEcCccccCChHHHHHHHHHH-hcCCEEEEEEecCchhhcccCCCCCCCCHHHHHHHHHhc--CCC-CcEEEc-CC-
Q 017744 257 RVVYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-AP- 330 (366)
Q Consensus 257 ~~v~~~GsFD~~h~GHi~~L~~A~-~~gd~LiVgV~sD~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V-d~Vvi~-~~- 330 (366)
++|-+ =+.+|+|.+|.+++++|. +.+|-|+| ...+-..| .-=++.+-|+...+.+ .|. +.|++. -|
T Consensus 165 ~v~af-qtrnp~Hrah~~~~~~~~~~~~~~lll----~pl~g~~k---~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~ 236 (552)
T 3cr8_A 165 RIIAW-QARQPMHRAQYEFCLKSAIENEANLLL----HPQVGGDI---TEAPAYFGLVRSFLAIRDRFPAATTQLSLLPA 236 (552)
T ss_dssp SEEEE-CCSSCCCHHHHHHHHHHHHHTTCEEEE----CCBCCCCT---TTCTTHHHHHHHHHHHGGGSCGGGEEECBBCS
T ss_pred ceEEE-ecCCCCchHHHHHHHHHHHhcCCeEEE----EeccCCCC---CCCCCHHHHHHHHHHHHHhCCCccEEEeecch
Confidence 34433 789999999999999988 78885444 22232323 3567899999888887 342 235532 11
Q ss_pred ----CCc----hHH-HHHHcCCcEEEECCCCCCC
Q 017744 331 ----WEV----TKD-MITTFNICLVVHGTVSETN 355 (366)
Q Consensus 331 ----~~~----~~d-~i~~~~~~~vv~G~~~~~~ 355 (366)
-+. .-. +-+.++++-++-|-|+.+.
T Consensus 237 ~m~~agprea~~ha~~r~n~G~th~ivGrdhag~ 270 (552)
T 3cr8_A 237 PPPEASGRALLLRAIVARNFGCSLLIAGGEHQPD 270 (552)
T ss_dssp CCCCSCSHHHHHHHHHHHHHTCSEEEC-------
T ss_pred hhcccCcHHHHHHHHHHHhCCCCeeeeCCCCCCC
Confidence 111 122 3455799999999887654
Done!